BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039736
(633 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 179/315 (56%), Gaps = 15/315 (4%)
Query: 322 KIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE-QFINE 380
K F+ ELQ A+DN++ LG+GGFG VYKG L DG++VAVKR + E QF E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 381 VVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXX 440
V ++S HR++++L G C+ +LVY Y++NG+++ + +
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP------ 139
Query: 441 XXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP 500
R R+A A +AY+H I HRD+K++NILLD++F A V DFG ++ +
Sbjct: 140 ------KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Query: 501 NDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTR--EEEE 558
H+ AV+GT G+ PEY + + ++K+DV+ +GV+LLEL+TG++ L R +++
Sbjct: 194 YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 253
Query: 559 RNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMD 618
L+ + L KE KL ++D + ++E++E + ++A+ C + + +RP M +V
Sbjct: 254 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 313
Query: 619 LEGLRRSQRCVEIDK 633
LEG ++R E K
Sbjct: 314 LEGDGLAERWEEWQK 328
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 179/316 (56%), Gaps = 17/316 (5%)
Query: 322 KIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE--QFIN 379
K F+ ELQ A+DN+ LG+GGFG VYKG L DG +VAVKR + ++TQ QF
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKE-ERTQGGELQFQT 76
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV ++S HR++++L G C+ +LVY Y++NG+++ + +
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWP----- 131
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
R R+A A +AY+H I HRD+K++NILLD++F A V DFG ++ +
Sbjct: 132 -------KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTR--EEE 557
H+ AV+G G+ PEY + + ++K+DV+ +GV+LLEL+TG++ L R ++
Sbjct: 185 DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244
Query: 558 ERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSM 617
+ L+ + L KE KL ++D + ++E++E + ++A+ C + + +RP M +V
Sbjct: 245 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 304
Query: 618 DLEGLRRSQRCVEIDK 633
LEG ++R E K
Sbjct: 305 MLEGDGLAERWEEWQK 320
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 162/303 (53%), Gaps = 16/303 (5%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQI 387
+L+ AT+N++ +G G FG VYKG+L DG+ VA+KR IE+F E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H H+V L+G C E +L+Y+Y+ NG L H++
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG------------SDLPTMSMSWEQ 140
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN-DKTHL 506
R+ + A + Y+H+ A I HRD+KS NILLD+ F K++DFG S+ D+THL
Sbjct: 141 RLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFI 566
V+GT GY DPEYF + T+KSDVYSFGVVL E+L + I + E NL + +
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 567 SLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRSQ 626
+L +I+D +A + R E + + A+ CL L+S+ RP+M V LE R Q
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
Query: 627 RCV 629
V
Sbjct: 318 ESV 320
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 161/303 (53%), Gaps = 16/303 (5%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQI 387
+L+ AT+N++ +G G FG VYKG+L DG+ VA+KR IE+F E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H H+V L+G C E +L+Y+Y+ NG L H++
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG------------SDLPTMSMSWEQ 140
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN-DKTHL 506
R+ + A + Y+H+ A I HRD+KS NILLD+ F K++DFG S+ +THL
Sbjct: 141 RLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHL 197
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFI 566
V+GT GY DPEYF + T+KSDVYSFGVVL E+L + I + E NL + +
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 567 SLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRSQ 626
+L +I+D +A + R E + + A+ CL L+S+ RP+M V LE R Q
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
Query: 627 RCV 629
V
Sbjct: 318 ESV 320
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 158/312 (50%), Gaps = 29/312 (9%)
Query: 324 FTAEELQRATDNYNQSRF------LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE-- 375
F+ EL+ T+N+++ +G+GGFG VYKG + + ++ K + +D T E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 376 -QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXX 434
QF E+ ++++ H ++V+LLG + + LVY Y+ NG+L +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL------------- 121
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
R ++A A + ++H I HRDIKS+NILLD+ F+AK+SDFG
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFG 178
Query: 495 TSRSVPN-DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLT 553
+R+ +T + + + GT Y PE + + T KSD+YSFGVVLLE++TG P
Sbjct: 179 LARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDE 236
Query: 554 REEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMK 613
E + L +E + + +D ++ +A +EA+ +A CL KRP +K
Sbjct: 237 HREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIK 295
Query: 614 QVSMDLEGLRRS 625
+V L+ + S
Sbjct: 296 KVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 157/312 (50%), Gaps = 29/312 (9%)
Query: 324 FTAEELQRATDNYNQSRF------LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE-- 375
F+ EL+ T+N+++ +G+GGFG VYKG + + ++ K + +D T E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 376 -QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXX 434
QF E+ ++++ H ++V+LLG + + LVY Y+ NG+L +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL------------- 121
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
R ++A A + ++H I HRDIKS+NILLD+ F+AK+SDFG
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFG 178
Query: 495 TSRSVPN-DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLT 553
+R+ +T + + GT Y PE + + T KSD+YSFGVVLLE++TG P
Sbjct: 179 LARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDE 236
Query: 554 REEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMK 613
E + L +E + + +D ++ +A +EA+ +A CL KRP +K
Sbjct: 237 HREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIK 295
Query: 614 QVSMDLEGLRRS 625
+V L+ + S
Sbjct: 296 KVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 156/312 (50%), Gaps = 29/312 (9%)
Query: 324 FTAEELQRATDNYNQSRF------LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE-- 375
F+ EL+ T+N+++ +G+GGFG VYKG + + ++ K + +D T E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 376 -QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXX 434
QF E+ ++++ H ++V+LLG + + LVY Y+ NG+L +
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL------------- 115
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
R ++A A + ++H I HRDIKS+NILLD+ F+AK+SDFG
Sbjct: 116 SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFG 172
Query: 495 TSRSVPN-DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLT 553
+R+ + + + GT Y PE + + T KSD+YSFGVVLLE++TG P
Sbjct: 173 LARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDE 230
Query: 554 REEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMK 613
E + L +E + + +D ++ +A +EA+ +A CL KRP +K
Sbjct: 231 HREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIK 289
Query: 614 QVSMDLEGLRRS 625
+V L+ + S
Sbjct: 290 KVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 149/307 (48%), Gaps = 29/307 (9%)
Query: 324 FTAEELQRATDNYNQSRF------LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE-- 375
F+ EL+ T+N+++ G+GGFG VYKG + + ++ K + +D T E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 376 -QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXX 434
QF E+ + ++ H ++V+LLG + + LVY Y NG+L +
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL------------- 112
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
R ++A A + ++H I HRDIKS+NILLD+ F+AK+SDFG
Sbjct: 113 SCLDGTPPLSWHXRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFG 169
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLT 553
+R+ + + + GT Y PE + + T KSD+YSFGVVLLE++TG P
Sbjct: 170 LARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG-LPAVDE 227
Query: 554 REEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMK 613
E + L +E + + +D + +A +EA +A CL KRP +K
Sbjct: 228 HREPQLLLDIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIK 286
Query: 614 QVSMDLE 620
+V L+
Sbjct: 287 KVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCC 399
+G G FGTV++ GS VAVK + ++ +F+ EV I+ ++ H +IV +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 400 LETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAV 459
+ +V EY+S G+L +H R+ +A +VA +
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH-------------KSGAREQLDERRRLSMAYDVAKGM 150
Query: 460 AYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDP 519
Y+H+ + PI HRD+KS N+L+D K++ KV DFG SR + + GT + P
Sbjct: 151 NYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAP 208
Query: 520 EYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
E + +KSDVYSFGV+L EL T ++P
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 20/211 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCC 399
+G G FGTV++ GS VAVK + ++ +F+ EV I+ ++ H +IV +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 400 LETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAV 459
+ +V EY+S G+L +H R+ +A +VA +
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH-------------KSGAREQLDERRRLSMAYDVAKGM 150
Query: 460 AYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT-AVQGTFGYFD 518
Y+H+ + PI HR++KS N+L+D K++ KV DFG SR T L++ + GT +
Sbjct: 151 NYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMA 207
Query: 519 PEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
PE + +KSDVYSFGV+L EL T ++P
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 147/327 (44%), Gaps = 59/327 (18%)
Query: 314 SCGSSEKAKIFTAEELQRATDN-YNQSRFLGQGGFGTVYKG-MLPDGSIVAVK------- 364
+ G SE F L DN + +G+GGFG V+KG ++ D S+VA+K
Sbjct: 2 AMGGSE----FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDS 57
Query: 365 --RSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIH 422
+ I+K Q +F EV I+S +NH +IVKL G L P +V E++ G L H +
Sbjct: 58 EGETEMIEKFQ--EFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL 113
Query: 423 DHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL 482
D ++R+ ++A + YM + PI HRD++S NI L
Sbjct: 114 DKAHPIKWSV---------------KLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFL 157
Query: 483 -----DDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQ--YTDKSDVYS 535
+ AKV+DFGTS+ H + + G F + PE + + YT+K+D YS
Sbjct: 158 QSLDENAPVCAKVADFGTSQQ----SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYS 213
Query: 536 FGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVA 595
F ++L +LTG+ P +E FI++ +E L + R V
Sbjct: 214 FAMILYTILTGEGPF-----DEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN-----VI 263
Query: 596 ELAMGCLRLNSKKRPTMKQVSMDLEGL 622
EL C + KKRP + +L L
Sbjct: 264 EL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 146/327 (44%), Gaps = 59/327 (18%)
Query: 314 SCGSSEKAKIFTAEELQRATDN-YNQSRFLGQGGFGTVYKG-MLPDGSIVAVK------- 364
+ G SE F L DN + +G+GGFG V+KG ++ D S+VA+K
Sbjct: 2 AMGGSE----FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDS 57
Query: 365 --RSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIH 422
+ I+K Q +F EV I+S +NH +IVKL G L P +V E++ G L H +
Sbjct: 58 EGETEMIEKFQ--EFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL 113
Query: 423 DHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL 482
D ++R+ ++A + YM + PI HRD++S NI L
Sbjct: 114 DKAHPIKWSV---------------KLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFL 157
Query: 483 -----DDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQ--YTDKSDVYS 535
+ AKV+DFG S+ H + + G F + PE + + YT+K+D YS
Sbjct: 158 QSLDENAPVCAKVADFGLSQQ----SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYS 213
Query: 536 FGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVA 595
F ++L +LTG+ P +E FI++ +E L + R V
Sbjct: 214 FAMILYTILTGEGPF-----DEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN-----VI 263
Query: 596 ELAMGCLRLNSKKRPTMKQVSMDLEGL 622
EL C + KKRP + +L L
Sbjct: 264 EL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 201
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN---DKTHLTTAVQG 512
A + ++ AS HRD+ + N +LD+KF+ KV+DFG +R + + D H T +
Sbjct: 202 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 258
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 259 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 37/223 (16%)
Query: 341 FLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFI----NEVVILSQINHRHIVKLL 396
+G GGFG VY+ G VAVK +R I Q I E + + + H +I+ L
Sbjct: 14 IIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
G CL+ LV E+ G L+ + V A ++A
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL-----------------VNWAVQIA 115
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILLDDKFS--------AKVSDFGTSRSVPNDKTHLTT 508
+ Y+H A +PI HRD+KSSNIL+ K K++DFG +R + H TT
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTT 170
Query: 509 --AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ G + + PE ++S ++ SDV+S+GV+L ELLTG+ P
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 143
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN---DKTHLTTAVQG 512
A + ++ AS HRD+ + N +LD+KF+ KV+DFG +R + + D H T +
Sbjct: 144 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL 200
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 145/327 (44%), Gaps = 59/327 (18%)
Query: 314 SCGSSEKAKIFTAEELQRATDN-YNQSRFLGQGGFGTVYKG-MLPDGSIVAVK------- 364
+ G SE F L DN + +G+GGFG V+KG ++ D S+VA+K
Sbjct: 2 AMGGSE----FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDS 57
Query: 365 --RSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIH 422
+ I+K Q +F EV I+S +NH +IVKL G L P +V E++ G L H +
Sbjct: 58 EGETEMIEKFQ--EFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL 113
Query: 423 DHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL 482
D ++R+ ++A + YM + PI HRD++S NI L
Sbjct: 114 DKAHPIKWSV---------------KLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFL 157
Query: 483 -----DDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQ--YTDKSDVYS 535
+ AKV+DF S+ H + + G F + PE + + YT+K+D YS
Sbjct: 158 QSLDENAPVCAKVADFSLSQQ----SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYS 213
Query: 536 FGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVA 595
F ++L +LTG+ P +E FI++ +E L + R V
Sbjct: 214 FAMILYTILTGEGPF-----DEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN-----VI 263
Query: 596 ELAMGCLRLNSKKRPTMKQVSMDLEGL 622
EL C + KKRP + +L L
Sbjct: 264 EL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 140
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN---DKTHLTTAVQG 512
A + ++ AS HRD+ + N +LD+KF+ KV+DFG +R + + D H T +
Sbjct: 141 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 197
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G+G FG V K VA+K+ + +++ + FI E+ LS++NH +IVKL G CL
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
PV LV EY G+L + +H + + + + VA
Sbjct: 74 ---PVCLVMEYAEGGSLYNVLHG-------------AEPLPYYTAAHAMSWCLQCSQGVA 117
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSA-KVSDFGTSRSVPNDKTHLTTAVQGTFGYFDP 519
Y+HS + HRD+K N+LL + K+ DFGT+ + +TH+T +G+ + P
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAP 173
Query: 520 EYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILD 579
E F+ S Y++K DV+S+G++L E++T +KP +E A+ I A N L
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPF------DEIGGPAFRIMWAVHNGTRPPLI 227
Query: 580 ARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRR 624
+ K + L C + +RP+M+++ + L R
Sbjct: 228 KNLPK--------PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 142
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN---DKTHLTTAVQG 512
A + ++ AS HRD+ + N +LD+KF+ KV+DFG +R + + D H T +
Sbjct: 143 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 143
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN---DKTHLTTAVQG 512
A + ++ AS HRD+ + N +LD+KF+ KV+DFG +R + + D H T +
Sbjct: 144 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 200
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 134
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK---THLTTAVQG 512
A + Y+ AS HRD+ + N +LD+KF+ KV+DFG +R + + + H T +
Sbjct: 135 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 191
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 142
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN---DKTHLTTAVQG 512
A + ++ AS HRD+ + N +LD+KF+ KV+DFG +R + + D H T +
Sbjct: 143 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 199
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 147
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN---DKTHLTTAVQG 512
A + ++ AS HRD+ + N +LD+KF+ KV+DFG +R + + D H T +
Sbjct: 148 AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL 204
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 205 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 39/285 (13%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G+G FG V K VA+K+ + +++ + FI E+ LS++NH +IVKL G CL
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
PV LV EY G+L + +H + + + + VA
Sbjct: 73 ---PVCLVMEYAEGGSLYNVLHG-------------AEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSA-KVSDFGTSRSVPNDKTHLTTAVQGTFGYFDP 519
Y+HS + HRD+K N+LL + K+ DFGT+ + +TH+T +G+ + P
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAP 172
Query: 520 EYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILD 579
E F+ S Y++K DV+S+G++L E++T +KP +E A+ I A N L
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPF------DEIGGPAFRIMWAVHNGTRPPLI 226
Query: 580 ARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRR 624
+ K + L C + +RP+M+++ + L R
Sbjct: 227 KNLPK--------PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 141
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK---THLTTAVQG 512
A + Y+ AS HRD+ + N +LD+KF+ KV+DFG +R + + + H T +
Sbjct: 142 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL 198
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 161
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK---THLTTAVQG 512
A + Y+ AS HRD+ + N +LD+KF+ KV+DFG +R + + + H T +
Sbjct: 162 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 218
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 160
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK---THLTTAVQG 512
A + Y+ AS HRD+ + N +LD+KF+ KV+DFG +R + + + H T +
Sbjct: 161 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 217
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 142
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK---THLTTAVQG 512
A + Y+ AS HRD+ + N +LD+KF+ KV+DFG +R + + + H T +
Sbjct: 143 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 139
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK---THLTTAVQG 512
A + Y+ AS HRD+ + N +LD+KF+ KV+DFG +R + + + H T +
Sbjct: 140 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 196
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 140
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK---THLTTAVQG 512
A + Y+ AS HRD+ + N +LD+KF+ KV+DFG +R + + + H T +
Sbjct: 141 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 197
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 141
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK---THLTTAVQG 512
A + Y+ AS HRD+ + N +LD+KF+ KV+DFG +R + + + H T +
Sbjct: 142 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 198
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 142
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK---THLTTAVQG 512
A + Y+ AS HRD+ + N +LD+KF+ KV+DFG +R + + + H T +
Sbjct: 143 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 199
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 112/217 (51%), Gaps = 27/217 (12%)
Query: 342 LGQGGFGTVYKGML--PDGSIV--AVKR-SRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
+G+G FG VY G L DG + AVK +R D ++ QF+ E +I+ +H +++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 397 GCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G CL +E P++V Y+ +G L + I + + + +V
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK---------------DLIGFGLQV 137
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK---THLTTAVQG 512
A + Y+ AS HRD+ + N +LD+KF+ KV+DFG +R + + + H T +
Sbjct: 138 AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL 194
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ E Q+ ++T KSDV+SFGV+L EL+T P
Sbjct: 195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 131/295 (44%), Gaps = 32/295 (10%)
Query: 340 RFLGQGGFGTVYKG----MLP--DGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIV 393
R LG+G FG V+ + P D +VAVK + + F E +L+ + H HIV
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIV 78
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC 453
K G C+E + ++V+EY+ +G L+ + H + +A
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAH---GPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTTAVQG 512
++A + Y+ AS HRD+ + N L+ + K+ DFG SR V D +
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKE 571
+ PE ++T +SDV+S GVVL E+ T GK+P Y +S
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP-------------WYQLS---N 236
Query: 572 NKLLE-ILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
N+++E I RV + R E V EL +GC + R +K + L+ L ++
Sbjct: 237 NEVIECITQGRVLQRPRTCPQE-VYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 28/292 (9%)
Query: 342 LGQGGFGTVY----KGMLP--DGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKL 395
LG+G FG V+ +LP D +VAVK + ++ + F E +L+ + H+HIV+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 396 LGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G C E ++V+EY+ +G L+ + H + VA +V
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSH-GPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTTAVQGTF 514
A + Y+ A + HRD+ + N L+ K+ DFG SR + D +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 515 GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENK 573
+ PE ++T +SDV+SFGVVL E+ T GK+P + L+
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP---------------WYQLSNTEA 269
Query: 574 LLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
+ I R + R E A + GC + ++R ++K V L+ L ++
Sbjct: 270 IDCITQGRELERPRACPPEVYA-IMRGCWQREPQQRHSIKDVHARLQALAQA 320
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FG V+ G + VA+K R ++ E FI E ++ +++H +V+L G CLE
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
LV+E++ +G LS ++ + + +V +AY
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL---------------LGMCLDVCEGMAY 118
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ A+ I HRD+ + N L+ + KVSDFG +R V +D+ +T + + PE
Sbjct: 119 LEEASVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 175
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F S+Y+ KSDV+SFGV++ E+ + GK P
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 28/292 (9%)
Query: 342 LGQGGFGTVY----KGMLP--DGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKL 395
LG+G FG V+ +LP D +VAVK + ++ + F E +L+ + H+HIV+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 396 LGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G C E ++V+EY+ +G L+ + H + VA +V
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSH-GPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTTAVQGTF 514
A + Y+ A + HRD+ + N L+ K+ DFG SR + D +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 515 GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENK 573
+ PE ++T +SDV+SFGVVL E+ T GK+P + L+
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP---------------WYQLSNTEA 240
Query: 574 LLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
+ I R + R E A + GC + ++R ++K V L+ L ++
Sbjct: 241 IDCITQGRELERPRACPPEVYA-IMRGCWQREPQQRHSIKDVHARLQALAQA 291
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 28/292 (9%)
Query: 342 LGQGGFGTVY----KGMLP--DGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKL 395
LG+G FG V+ +LP D +VAVK + ++ + F E +L+ + H+HIV+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 396 LGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
G C E ++V+EY+ +G L+ + H + VA +V
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSH-GPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTTAVQGTF 514
A + Y+ A + HRD+ + N L+ K+ DFG SR + D +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 515 GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENK 573
+ PE ++T +SDV+SFGVVL E+ T GK+P + L+
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP---------------WYQLSNTEA 246
Query: 574 LLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
+ I R + R E A + GC + ++R ++K V L+ L ++
Sbjct: 247 IDCITQGRELERPRACPPEVYA-IMRGCWQREPQQRHSIKDVHARLQALAQA 297
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FG V+ G + VA+K R ++ E FI E ++ +++H +V+L G CLE
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
LV+E++ +G LS ++ + + +V +AY
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL---------------LGMCLDVCEGMAY 116
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ A I HRD+ + N L+ + KVSDFG +R V +D+ +T + + PE
Sbjct: 117 LEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 173
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F S+Y+ KSDV+SFGV++ E+ + GK P
Sbjct: 174 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FG V+ G + VA+K R ++ E FI E ++ +++H +V+L G CLE
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
LV+E++ +G LS ++ + + +V +AY
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL---------------LGMCLDVCEGMAY 121
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ A I HRD+ + N L+ + KVSDFG +R V +D+ +T + + PE
Sbjct: 122 LEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 178
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F S+Y+ KSDV+SFGV++ E+ + GK P
Sbjct: 179 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FG V+ G + VA+K R ++ E FI E ++ +++H +V+L G CLE
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
LV+E++ +G LS ++ + + +V +AY
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL---------------LGMCLDVCEGMAY 118
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ A I HRD+ + N L+ + KVSDFG +R V +D+ +T + + PE
Sbjct: 119 LEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 175
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F S+Y+ KSDV+SFGV++ E+ + GK P
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 34/288 (11%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLH---------------IIETKFEMIKLIDIARQTAQGMDY 119
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG-TSRSVPNDKTHLTTAVQGTFGYFDPE 520
+H+ + I HRD+KS+NI L + + K+ DFG + +H + G+ + PE
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
Query: 521 YFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEI 577
+ + Y+ +SDVY+FG+VL EL+TG+ P R+ + + +
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFMVGRG-------Y 226
Query: 578 LDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
L ++K R +A+ L CL+ +RP Q+ +E L RS
Sbjct: 227 LSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 96 PQLAI-VTQWCEGSSLYHHLH---------------IIETKFEMIKLIDIARQTAQGMDY 139
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHLTTAVQGTFGYFDP 519
+H+ + I HRD+KS+NI L + + K+ DFG T +S + +H + G+ + P
Sbjct: 140 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAP 195
Query: 520 EYFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLE 576
E + + Y+ +SDVY+FG+VL EL+TG+ P R+ + + +
Sbjct: 196 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFMVGRG------- 245
Query: 577 ILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
L ++K R +A+ L CL+ +RP Q+ +E L RS
Sbjct: 246 YLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 293
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLH---------------IIETKFEMIKLIDIARQTAQGMDY 119
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHLTTAVQGTFGYFDP 519
+H+ + I HRD+KS+NI L + + K+ DFG T +S + +H + G+ + P
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAP 175
Query: 520 EYFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLE 576
E + + Y+ +SDVY+FG+VL EL+TG+ P R+ + + +
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFMVGRG------- 225
Query: 577 ILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
L ++K R +A+ L CL+ +RP Q+ +E L RS
Sbjct: 226 YLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 104 PQLAI-VTQWCEGSSLYHHLH---------------IIETKFEMIKLIDIARQTAQGMDY 147
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHLTTAVQGTFGYFDP 519
+H+ + I HRD+KS+NI L + + K+ DFG T +S + +H + G+ + P
Sbjct: 148 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAP 203
Query: 520 EYFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLE 576
E + + Y+ +SDVY+FG+VL EL+TG+ P R+ + + +
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFMVGRG------- 253
Query: 577 ILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
L ++K R +A+ L CL+ +RP Q+ +E L RS
Sbjct: 254 YLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 81 PQLAI-VTQWCEGSSLYHHLH---------------IIETKFEMIKLIDIARQTAQGMDY 124
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHLTTAVQGTFGYFDP 519
+H+ + I HRD+KS+NI L + + K+ DFG T +S + +H + G+ + P
Sbjct: 125 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAP 180
Query: 520 EYFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLE 576
E + + Y+ +SDVY+FG+VL EL+TG+ P R+ + + +
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFMVGRG------- 230
Query: 577 ILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
L ++K R +A+ L CL+ +RP Q+ +E L RS
Sbjct: 231 YLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 278
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 21/240 (8%)
Query: 316 GSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE 375
GS A ++ +E + A + SR LGQG FG VY+G + G + +R KT E
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE 59
Query: 376 --------QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 60 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS---- 115
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS 487
+++A E+A +AY+++ + HRD+ + N ++ + F+
Sbjct: 116 --LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFT 170
Query: 488 AKVSDFGTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
K+ DFG +R + + + +G + PE + +T SDV+SFGVVL E+ T
Sbjct: 171 VKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 81 PQLAI-VTQWCEGSSLYHHLH---------------IIETKFEMIKLIDIARQTAQGMDY 124
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHLTTAVQGTFGYFDP 519
+H+ + I HRD+KS+NI L + + K+ DFG T +S + +H + G+ + P
Sbjct: 125 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAP 180
Query: 520 EYFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLE 576
E + + Y+ +SDVY+FG+VL EL+TG+ P R+ + + +
Sbjct: 181 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFMVGRG------- 230
Query: 577 ILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
L ++K R +A+ L CL+ +RP Q+ +E L RS
Sbjct: 231 YLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 278
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 78 PQLAI-VTQWCEGSSLYHHLH---------------IIETKFEMIKLIDIARQTAQGMDY 121
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHLTTAVQGTFGYFDP 519
+H+ + I HRD+KS+NI L + + K+ DFG T +S + +H + G+ + P
Sbjct: 122 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAP 177
Query: 520 EYFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLE 576
E + + Y+ +SDVY+FG+VL EL+TG+ P R+ + + +
Sbjct: 178 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFMVGRG------- 227
Query: 577 ILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
L ++K R +A+ L CL+ +RP Q+ +E L RS
Sbjct: 228 YLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 275
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 27/243 (11%)
Query: 316 GSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE 375
GS A ++ +E + A + SR LGQG FG VY+G + G + +R KT E
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNE 59
Query: 376 --------QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 60 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS---- 115
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS 487
+++A E+A +AY+++ + HRD+ + N ++ + F+
Sbjct: 116 --LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFT 170
Query: 488 AKVSDFGTSRSVPNDKTHLTTAVQGTFG-----YFDPEYFQSSQYTDKSDVYSFGVVLLE 542
K+ DFG +R D +G G + PE + +T SDV+SFGVVL E
Sbjct: 171 VKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 226
Query: 543 LLT 545
+ T
Sbjct: 227 IAT 229
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 36/289 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLH---------------IIETKFEMIKLIDIARQTAQGMDY 119
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHLTTAVQGTFGYFDP 519
+H+ + I HRD+KS+NI L + + K+ DFG T +S + +H + G+ + P
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAP 175
Query: 520 EYFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLE 576
E + + Y+ +SDVY+FG+VL EL+TG+ P R+ + + +
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFMVGRG------- 225
Query: 577 ILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
L ++K R +A+ L CL+ +RP Q+ +E L RS
Sbjct: 226 YLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 273
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 103 PQLAI-VTQWCEGSSLYHHLH---------------IIETKFEMIKLIDIARQTAQGMDY 146
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHLTTAVQGTFGYFDP 519
+H+ + I HRD+KS+NI L + + K+ DFG T +S + +H + G+ + P
Sbjct: 147 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAP 202
Query: 520 EYFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLE 576
E + + Y+ +SDVY+FG+VL EL+TG+ P R+ + + +
Sbjct: 203 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFMVGRG------- 252
Query: 577 ILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
L ++K R +A+ L CL+ +RP Q+ +E L RS
Sbjct: 253 YLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 300
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 104 PQLAI-VTQWCEGSSLYHHLH---------------IIETKFEMIKLIDIARQTAQGMDY 147
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHLTTAVQGTFGYFDP 519
+H+ + I HRD+KS+NI L + + K+ DFG T +S + +H + G+ + P
Sbjct: 148 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAP 203
Query: 520 EYFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLE 576
E + + Y+ +SDVY+FG+VL EL+TG+ P R+ + + +
Sbjct: 204 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFMVGRG------- 253
Query: 577 ILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
L ++K R +A+ L CL+ +RP Q+ +E L RS
Sbjct: 254 YLSPDLSK-VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS 301
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 21/235 (8%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE----- 375
A +F +E + A + SR LGQG FG VY+G + G + +R KT E
Sbjct: 3 ADVFVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMR 61
Query: 376 ---QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS------LRP 115
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
+++A E+A +AY+++ + HRD+ + N ++ + F+ K+ D
Sbjct: 116 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGD 172
Query: 493 FGTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
FG +R + + + +G + PE + +T SDV+SFGVVL E+ T
Sbjct: 173 FGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 27/294 (9%)
Query: 340 RFLGQGGFGTVYKG----MLP--DGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIV 393
R LG+G FG V+ + P D +VAVK + + F E +L+ + H HIV
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC 453
K G C + + ++V+EY+ +G L+ + H + +A
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTTAVQG 512
++A + Y+ AS HRD+ + N L+ K+ DFG SR V D +
Sbjct: 141 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKE 571
+ PE ++T +SDV+SFGV+L E+ T GK+P + L+
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP---------------WFQLSNT 242
Query: 572 NKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
+ I RV + R E V ++ +GC + ++R +K++ L L ++
Sbjct: 243 EVIECITQGRVLERPRVCPKE-VYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FG V+ G + VA+K R ++ E FI E ++ +++H +V+L G CLE
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
LV E++ +G LS ++ + + +V +AY
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETL---------------LGMCLDVCEGMAY 119
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ A I HRD+ + N L+ + KVSDFG +R V +D+ +T + + PE
Sbjct: 120 LEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 176
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F S+Y+ KSDV+SFGV++ E+ + GK P
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 131
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 132 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES 188
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 234
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 235 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 21/235 (8%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE----- 375
A ++ +E + A + SR LGQG FG VY+G + G + +R KT E
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 376 ---QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS------LRP 124
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
+++A E+A +AY+++ + HRD+ + N ++ + F+ K+ D
Sbjct: 125 AMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGD 181
Query: 493 FGTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
FG +R + + + +G + PE + +T SDV+SFGVVL E+ T
Sbjct: 182 FGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 123/282 (43%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL--------------LYMATQISSAMEY 124
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 125 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES 181
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P +++ E+L+
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDPSQVYELLEK 225
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
E E E V EL C + N RP+ ++ E +
Sbjct: 226 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FG V+ G + VA+K + ++ + FI E ++ +++H +V+L G CLE
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
LV+E++ +G LS ++ + + +V +AY
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETL---------------LGMCLDVCEGMAY 138
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ A I HRD+ + N L+ + KVSDFG +R V +D+ +T + + PE
Sbjct: 139 LEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 195
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F S+Y+ KSDV+SFGV++ E+ + GK P
Sbjct: 196 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 52/296 (17%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 92 PQLAI-VTQWCEGSSLYHHLH---------------ASETKFEMKKLIDIARQTARGMDY 135
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHLTTAVQGTFGYFDP 519
+H+ + I HRD+KS+NI L + + K+ DFG T +S + +H + G+ + P
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAP 191
Query: 520 EYFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLE 576
E + S+ Y+ +SDVY+FG+VL EL+TG+ P + ++ ++++E
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIE 236
Query: 577 ILDARVAKEAREEDIEAV--------AELAMGCLRLNSKKRPTMKQVSMDLEGLRR 624
+ V + + D+ V L CL+ +RP+ ++ ++E L R
Sbjct: 237 M----VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 127
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 128 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES 184
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 230
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 231 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 127
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 128 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPES 184
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 230
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 231 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 21/235 (8%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE----- 375
A ++ +E + A + SR LGQG FG VY+G + G + +R KT E
Sbjct: 5 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 376 ---QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS------LRP 117
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
+++A E+A +AY+++ + HRD+ + N ++ + F+ K+ D
Sbjct: 118 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGD 174
Query: 493 FGTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
FG +R + + + +G + PE + +T SDV+SFGVVL E+ T
Sbjct: 175 FGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 21/235 (8%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE----- 375
A ++ +E + A + SR LGQG FG VY+G + G + +R KT E
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 376 ---QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR------SLRP 124
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
+++A E+A +AY+++ + HRD+ + N ++ + F+ K+ D
Sbjct: 125 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGD 181
Query: 493 FGTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
FG +R + + + +G + PE + +T SDV+SFGVVL E+ T
Sbjct: 182 FGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 131
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 132 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 234
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 235 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 128
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 129 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPES 185
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 231
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 232 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 111/234 (47%), Gaps = 19/234 (8%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML-------PDGSIVAVKRSRAIDKTQ 373
A ++ +E + A + SR LGQG FG VY+G+ P+ + + A +
Sbjct: 2 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 61
Query: 374 IEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXX 433
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 62 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS------LRPA 115
Query: 434 XXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDF 493
+++A E+A +AY+++ + HRD+ + N ++ + F+ K+ DF
Sbjct: 116 MANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDF 172
Query: 494 GTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
G +R + + + +G + PE + +T SDV+SFGVVL E+ T
Sbjct: 173 GMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 130
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 131 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 187
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 233
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 234 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 131
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 132 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 234
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 235 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 126
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 127 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 229
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 230 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 126
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 127 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 229
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 230 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL--------------LYMATQISSAMEY 131
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 132 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 234
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 235 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 21/235 (8%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE----- 375
A ++ +E + A + SR LGQG FG VY+G + G + +R KT E
Sbjct: 5 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 376 ---QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS------LRP 117
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
+++A E+A +AY+++ + HRD+ + N ++ + F+ K+ D
Sbjct: 118 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGD 174
Query: 493 FGTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
FG +R + + + +G + PE + +T SDV+SFGVVL E+ T
Sbjct: 175 FGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL--------------LYMATQISSAMEY 126
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 127 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 229
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 230 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 52/296 (17%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 80 PQLAI-VTQWCEGSSLYHHLH---------------ASETKFEMKKLIDIARQTARGMDY 123
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHLTTAVQGTFGYFDP 519
+H+ + I HRD+KS+NI L + + K+ DFG T +S + +H + G+ + P
Sbjct: 124 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG-SHQFEQLSGSILWMAP 179
Query: 520 EYFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLE 576
E + S+ Y+ +SDVY+FG+VL EL+TG+ P + ++ ++++E
Sbjct: 180 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIE 224
Query: 577 ILDARVAKEAREEDIEAV--------AELAMGCLRLNSKKRPTMKQVSMDLEGLRR 624
+ V + + D+ V L CL+ +RP+ ++ ++E L R
Sbjct: 225 M----VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 276
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 139
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 140 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 196
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 197 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 242
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 243 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL--------------LYMATQISSAMEY 126
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 127 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 229
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 230 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL--------------LYMATQISSAMEY 126
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 127 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 229
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 230 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 131
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 132 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 188
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 189 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 234
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 235 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 52/296 (17%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
+G G FGTVYKG V + A Q++ F NEV +L + H +I+ +G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ + V ++ +L HH+H + +A + A + Y
Sbjct: 92 PQLAI-VTQWCEGSSLYHHLH---------------ASETKFEMKKLIDIARQTARGMDY 135
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHLTTAVQGTFGYFDP 519
+H+ + I HRD+KS+NI L + + K+ DFG T +S + +H + G+ + P
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-SHQFEQLSGSILWMAP 191
Query: 520 EYFQ---SSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLE 576
E + S+ Y+ +SDVY+FG+VL EL+TG+ P + ++ ++++E
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP---------------YSNINNRDQIIE 236
Query: 577 ILDARVAKEAREEDIEAV--------AELAMGCLRLNSKKRPTMKQVSMDLEGLRR 624
+ V + + D+ V L CL+ +RP+ ++ ++E L R
Sbjct: 237 M----VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 112/223 (50%), Gaps = 29/223 (13%)
Query: 337 NQSRFLGQGGFGTVYKGMLPDGS-----IVAVKRSRA--IDKTQIEQFINEVVILSQINH 389
+ + +G G FG VYKGML S VA+K +A +K +++ F+ E I+ Q +H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSH 105
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+I++L G + + +++ EY+ NG L + + +
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV------------------L 147
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND--KTHLT 507
++ + G A M A++ HRD+ + NIL++ KVSDFG SR + +D T+ T
Sbjct: 148 QLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + + PE ++T SDV+SFG+V+ E++T G++P
Sbjct: 208 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL--------------LYMATQISSAMEY 126
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 127 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 183
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 229
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 230 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 123/282 (43%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL--------------LYMATQISSAMEY 124
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 125 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPES 181
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P +++ E+L+
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDPSQVYELLEK 225
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
E E E V EL C + N RP+ ++ E +
Sbjct: 226 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 128
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 129 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 185
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 231
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 232 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 128
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 129 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 185
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 231
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
R+ E E E V EL C + N RP+ ++ E +
Sbjct: 232 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 111/234 (47%), Gaps = 19/234 (8%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML-------PDGSIVAVKRSRAIDKTQ 373
A ++ +E + A + SR LGQG FG VY+G+ P+ + + A +
Sbjct: 34 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 93
Query: 374 IEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXX 433
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 94 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS------LRPE 147
Query: 434 XXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDF 493
+++A E+A +AY+++ + HRD+ + N ++ + F+ K+ DF
Sbjct: 148 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDF 204
Query: 494 GTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
G +R + + + +G + PE + +T SDV+SFGVVL E+ T
Sbjct: 205 GMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 39/254 (15%)
Query: 308 LQQRLSSCGSSE---KAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAV 363
L + L+ G++ + +I EL+R + LG G FGTVYKG+ +P+G V +
Sbjct: 16 LVEPLTPSGTAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKI 68
Query: 364 KRSRAI------DKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTL 417
+ I K +E F++E +I++ ++H H+V+LLG CL + LV + + +G L
Sbjct: 69 PVAIKILNETTGPKANVE-FMDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCL 126
Query: 418 SHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKS 477
++H+H + ++A + Y+ + HRD+ +
Sbjct: 127 LEYVHEHKDNIGSQLL---------------LNWCVQIAKGMMYLEERR---LVHRDLAA 168
Query: 478 SNILLDDKFSAKVSDFGTSRSVPND-KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSF 536
N+L+ K++DFG +R + D K + + + E ++T +SDV+S+
Sbjct: 169 RNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSY 228
Query: 537 GVVLLELLT-GKKP 549
GV + EL+T G KP
Sbjct: 229 GVTIWELMTFGGKP 242
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 123/282 (43%), Gaps = 34/282 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL--------------LYMATQISSAMEY 124
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 125 LEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPES 181
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P +++ E+L+
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDPSQVYELLEK 225
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
E E E V EL C + N RP+ ++ E +
Sbjct: 226 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 36/237 (15%)
Query: 322 KIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAI------DKTQI 374
+I EL+R + LG G FGTVYKG+ +P+G V + + I K +
Sbjct: 10 RILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 62
Query: 375 EQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXX 434
E F++E +I++ ++H H+V+LLG CL + LV + + +G L ++H+H
Sbjct: 63 E-FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLL- 119
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ ++A + Y+ + HRD+ + N+L+ K++DFG
Sbjct: 120 --------------LNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFG 162
Query: 495 TSRSVPND-KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+R + D K + + + E ++T +SDV+S+GV + EL+T G KP
Sbjct: 163 LARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 35/294 (11%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL--------------LYMATQISSAMEY 333
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HR++ + N L+ + KV+DFG SR + D + + PE
Sbjct: 334 LEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 390
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 391 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 436
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL-RRSQRCVEIDK 633
R+ E E E V EL C + N RP+ ++ E + + S E++K
Sbjct: 437 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK 488
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 35/294 (11%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 330
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HR++ + N L+ + KV+DFG SR + D + + PE
Sbjct: 331 LEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 387
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 388 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 433
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL-RRSQRCVEIDK 633
R+ E E E V EL C + N RP+ ++ E + + S E++K
Sbjct: 434 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK 485
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 21/233 (9%)
Query: 323 IFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE------- 375
++ +E + A + SR LGQG FG VY+G + G + +R KT E
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 59
Query: 376 -QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXX 434
+F+NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS------LRPEM 113
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+++A E+A +AY+++ + HRD+ + N + + F+ K+ DFG
Sbjct: 114 ENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCXVAEDFTVKIGDFG 170
Query: 495 TSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+R + + + +G + PE + +T SDV+SFGVVL E+ T
Sbjct: 171 MTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 35/294 (11%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY+G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ E+++ G L ++ + + +A +++ A+ Y
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL--------------LYMATQISSAMEY 372
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HR++ + N L+ + KV+DFG SR + D + + PE
Sbjct: 373 LEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 429
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
++++ KSDV++FGV+L E+ T G P I L++ +LLE D
Sbjct: 430 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYELLE-KDY 475
Query: 581 RVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGL-RRSQRCVEIDK 633
R+ E E E V EL C + N RP+ ++ E + + S E++K
Sbjct: 476 RM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK 527
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 27/232 (11%)
Query: 327 EELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE--------QFI 378
+E + A + SR LGQG FG VY+G + G + +R KT E +F+
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 61
Query: 379 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS------LRPEMENNP 115
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
+++A E+A +AY+++ + HRD+ + N ++ + F+ K+ DFG +R
Sbjct: 116 VLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR- 171
Query: 499 VPNDKTHLTTAVQGTFG-----YFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
D +G G + PE + +T SDV+SFGVVL E+ T
Sbjct: 172 ---DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 21/229 (9%)
Query: 327 EELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE--------QFI 378
+E + A + SR LGQG FG VY+G + G + +R KT E +F+
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFL 63
Query: 379 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
NE ++ + N H+V+LLG + + +++ E ++ G L ++
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS------LRPEMENNP 117
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
+++A E+A +AY+++ + HRD+ + N ++ + F+ K+ DFG +R
Sbjct: 118 VLAPPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRD 174
Query: 499 VPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+ + + +G + PE + +T SDV+SFGVVL E+ T
Sbjct: 175 I-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 38/288 (13%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V G VAVK + ++ ++F E + +++H +VK G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVC-S 73
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
E P+ +V EYISNG L +++ H + + +V +A
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPS---------------QLLEMCYDVCEGMA 118
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ S I HRD+ + N L+D KVSDFG +R V +D+ + + + PE
Sbjct: 119 FLESHQFI---HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPE 175
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILD 579
F +Y+ KSDV++FG+++ E+ + GK P L E + +++ ++L
Sbjct: 176 VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE------VVLKVSQGHRLYRPHL 229
Query: 580 ARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRSQR 627
A + + ++ C +KRPT +Q+ +E LR +
Sbjct: 230 AS----------DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDK 267
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 143/327 (43%), Gaps = 54/327 (16%)
Query: 316 GSSEKAKIFTAEELQRATDNYNQ--------SRFLGQGGFGTVYKGMLPDGSIVAVKRSR 367
G+ EK KI QR + Y + S +G G FGTVYKG VAVK +
Sbjct: 12 GTQEKNKI--RPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGD--VAVKILK 67
Query: 368 AIDKT--QIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHX 425
+D T Q + F NEV +L + H +I+ +G + + + V ++ +L H+H
Sbjct: 68 VVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLH--- 123
Query: 426 XXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDK 485
+ +A + A + Y+H+ I HRD+KS+NI L +
Sbjct: 124 ------------VQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEG 168
Query: 486 FSAKVSDFG----TSRSVPNDKTHLTTAVQGTFGYFDPEYFQ---SSQYTDKSDVYSFGV 538
+ K+ DFG SR + + T G+ + PE + ++ ++ +SDVYS+G+
Sbjct: 169 LTVKIGDFGLATVKSRWSGSQQVEQPT---GSVLWMAPEVIRMQDNNPFSFQSDVYSYGI 225
Query: 539 VLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELA 598
VL EL+TG+ P R+ + + + + L L K A+ L
Sbjct: 226 VLYELMTGELPYSHI---NNRDQIIFMVGRGYASPDLSKLYKNCPK--------AMKRLV 274
Query: 599 MGCLRLNSKKRPTMKQVSMDLEGLRRS 625
C++ ++RP Q+ +E L+ S
Sbjct: 275 ADCVKKVKEERPLFPQILSSIELLQHS 301
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VA+K + E F+ E I+ ++ H +V+L E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY++ G+L + D N V +A +VA +AY
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKD--------------GEGRALKLPNLVDMAAQVAAGMAY 120
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD++S+NIL+ + K++DFG +R + +++ + + PE
Sbjct: 121 IERMNYI---HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEA 177
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
++T KSDV+SFG++L EL+T G+ P
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 29/226 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLPDG-------SIVAVKRSRAIDKTQIEQFINEVVIL 384
A ++ +R LG+G FG VY+G+ + ++ K+ +D E+F++E VI+
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIM 63
Query: 385 SQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXX 444
++H HIVKL+G +E E ++ E G L H++ +
Sbjct: 64 KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTL----------- 111
Query: 445 XXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKT 504
V + ++ A+AY+ S + HRDI NIL+ K+ DFG SR + ++
Sbjct: 112 ----VLYSLQICKAMAYLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 164
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + + + PE ++T SDV+ F V + E+L+ GK+P
Sbjct: 165 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 29/226 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLPDG-------SIVAVKRSRAIDKTQIEQFINEVVIL 384
A ++ +R LG+G FG VY+G+ + ++ K+ +D E+F++E VI+
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIM 79
Query: 385 SQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXX 444
++H HIVKL+G +E E ++ E G L H++ +
Sbjct: 80 KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTL----------- 127
Query: 445 XXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKT 504
V + ++ A+AY+ S + HRDI NIL+ K+ DFG SR + ++
Sbjct: 128 ----VLYSLQICKAMAYLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 180
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + + + PE ++T SDV+ F V + E+L+ GK+P
Sbjct: 181 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 29/226 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLPDG-------SIVAVKRSRAIDKTQIEQFINEVVIL 384
A ++ +R LG+G FG VY+G+ + ++ K+ +D E+F++E VI+
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIM 67
Query: 385 SQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXX 444
++H HIVKL+G +E E ++ E G L H++ +
Sbjct: 68 KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTL----------- 115
Query: 445 XXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKT 504
V + ++ A+AY+ S + HRDI NIL+ K+ DFG SR + ++
Sbjct: 116 ----VLYSLQICKAMAYLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + + + PE ++T SDV+ F V + E+L+ GK+P
Sbjct: 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 137/306 (44%), Gaps = 38/306 (12%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVK--RSRAIDKT 372
+ +F +E + + + R LGQG FG VY+G D + VAVK A +
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 373 QIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
+IE F+NE ++ H+V+LLG + + ++V E +++G L ++
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS------LRP 116
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
+++A E+A +AY+++ + HRD+ + N ++ F+ K+ D
Sbjct: 117 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGD 173
Query: 493 FGTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
FG +R + + + +G + PE + +T SD++SFGVVL E+ + ++P
Sbjct: 174 FGMTRDI-YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 550 ICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKR 609
+ L+ E L ++D + + E V +L C + N K R
Sbjct: 233 ---------------YQGLSNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNPKMR 276
Query: 610 PTMKQV 615
PT ++
Sbjct: 277 PTFLEI 282
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 137/306 (44%), Gaps = 38/306 (12%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVK--RSRAIDKT 372
+ +F +E + + + R LGQG FG VY+G D + VAVK A +
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 373 QIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
+IE F+NE ++ H+V+LLG + + ++V E +++G L ++
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR------SLRP 116
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
+++A E+A +AY+++ + HRD+ + N ++ F+ K+ D
Sbjct: 117 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGD 173
Query: 493 FGTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
FG +R + + + +G + PE + +T SD++SFGVVL E+ + ++P
Sbjct: 174 FGMTRDI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 550 ICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKR 609
+ L+ E L ++D + + E V +L C + N K R
Sbjct: 233 ---------------YQGLSNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNPKMR 276
Query: 610 PTMKQV 615
PT ++
Sbjct: 277 PTFLEI 282
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 122
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 123 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES 179
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 240 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 44/309 (14%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVK--RSRAIDKT 372
+ +F +E + + + R LGQG FG VY+G D + VAVK A +
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 373 QIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
+IE F+NE ++ H+V+LLG + + ++V E +++G L ++
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR------SLRP 116
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
+++A E+A +AY+++ + HRD+ + N ++ F+ K+ D
Sbjct: 117 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGD 173
Query: 493 FGTSRSVPNDKTHLTTAVQGTFG-----YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-G 546
FG +R D +G G + PE + +T SD++SFGVVL E+ +
Sbjct: 174 FGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 547 KKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNS 606
++P + L+ E L ++D + + E V +L C + N
Sbjct: 230 EQP---------------YQGLSNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNP 273
Query: 607 KKRPTMKQV 615
K RPT ++
Sbjct: 274 KMRPTFLEI 282
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 44/309 (14%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVK--RSRAIDKT 372
+ +F +E + + + R LGQG FG VY+G D + VAVK A +
Sbjct: 1 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 60
Query: 373 QIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
+IE F+NE ++ H+V+LLG + + ++V E +++G L ++
Sbjct: 61 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR------SLRP 113
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
+++A E+A +AY+++ + HRD+ + N ++ F+ K+ D
Sbjct: 114 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGD 170
Query: 493 FGTSRSVPNDKTHLTTAVQGTFG-----YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-G 546
FG +R D +G G + PE + +T SD++SFGVVL E+ +
Sbjct: 171 FGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 226
Query: 547 KKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNS 606
++P + L+ E L ++D + + E V +L C + N
Sbjct: 227 EQP---------------YQGLSNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNP 270
Query: 607 KKRPTMKQV 615
K RPT ++
Sbjct: 271 KMRPTFLEI 279
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 141/325 (43%), Gaps = 44/325 (13%)
Query: 312 LSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLP--DGSIV--AVKRSR 367
L S G S++ K E++ + R LG+G FG+V + L DGS V AVK +
Sbjct: 2 LDSLGISDELK-EKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK 60
Query: 368 A--IDKTQIEQFINEVVILSQINHRHIVKLLGCCLETE------VPVLVYEYISNGTLSH 419
A I + IE+F+ E + + +H H+ KL+G L + +P+++ ++ +G L
Sbjct: 61 ADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHA 120
Query: 420 HIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSN 479
+ VR ++A + Y+ S I HRD+ + N
Sbjct: 121 FL----------LASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFI---HRDLAARN 167
Query: 480 ILLDDKFSAKVSDFGTSRSV-PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGV 538
+L + + V+DFG SR + D A + + E + YT SDV++FGV
Sbjct: 168 CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGV 227
Query: 539 VLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAEL 597
+ E++T G+ P E N Y I N+L + E +E V +L
Sbjct: 228 TMWEIMTRGQTPYAGIENAEIYN---YLIG---GNRL----------KQPPECMEEVYDL 271
Query: 598 AMGCLRLNSKKRPTMKQVSMDLEGL 622
C + K+RP+ + M+LE +
Sbjct: 272 MYQCWSADPKQRPSFTCLRMELENI 296
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V EY+ NG+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG SR
Sbjct: 147 -----------IQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 252
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 253 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 299
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 300 IVSILDKLIRNPGSLKI 316
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 120/286 (41%), Gaps = 42/286 (14%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G +G VY G+ S+ ++ D ++E+F+ E ++ +I H ++V+LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+V EY+ G L ++ + + +A +++ A+ Y
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL--------------LYMATQISSAMEY 145
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD+ + N L+ + KV+DFG SR + D + + PE
Sbjct: 146 LEKKNFI---HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 202
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDA 580
+ ++ KSDV++FGV+L E+ T G P I L++ LLE
Sbjct: 203 LAYNTFSIKSDVWAFGVLLWEIATYGMSPYP-------------GIDLSQVYDLLE---- 245
Query: 581 RVAKEAREEDIEA----VAELAMGCLRLNSKKRPTMKQVSMDLEGL 622
K R E E V EL C + + RP+ + E +
Sbjct: 246 ---KGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 153
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 154 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 210
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 211 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 271 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 126
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 127 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 183
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 184 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 243
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 244 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 294
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 121
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 122 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 178
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 179 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 238
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 239 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 289
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 127
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 128 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 184
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 185 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 244
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 245 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 295
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 129
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 130 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 186
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 187 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 246
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 247 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 297
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 120
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 121 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 177
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 178 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 237
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 238 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 288
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 122
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 123 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 240 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 122
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 123 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 240 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 34/250 (13%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAI--DKTQIEQF 377
A+IF EL++ + LG G FGTV+KG+ +P+G + + + DK+ + F
Sbjct: 25 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 77
Query: 378 ---INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXX 434
+ ++ + ++H HIV+LLG C + + LV +Y+ G+L H+ H
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLL- 135
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ ++A + Y+ + HR++ + N+LL +V+DFG
Sbjct: 136 --------------LNWGVQIAKGMYYLEEHGMV---HRNLAARNVLLKSPSQVQVADFG 178
Query: 495 TSRSVP-NDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+ +P +DK L + + + E +YT +SDV+S+GV + EL+T G +P
Sbjct: 179 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 238
Query: 553 TREEEERNLV 562
R E +L+
Sbjct: 239 LRLAEVPDLL 248
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRS-RAI------DKTQIEQFINEVVILSQINHRHIVK 394
LG GG TVY L + +I+ +K + +AI + +++F EV SQ++H++IV
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
++ E + LV EYI TLS +I H + +
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTA----------------INFTNQ 119
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
+ + + H + I HRDIK NIL+D + K+ DFG ++++ T V GT
Sbjct: 120 ILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 515 GYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
YF PE + + +D+YS G+VL E+L G+ P
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 125
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 126 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 242
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 243 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 22 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V EY+ NG+L + H
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 134
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG SR
Sbjct: 135 -----------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 183
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 184 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 240
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 241 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 287
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 288 IVSILDKLIRNPGSLKI 304
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 128
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 129 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 185
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 186 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 245
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 246 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 296
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 32 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V EY+ NG+L + H
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 144
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG SR
Sbjct: 145 -----------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 193
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 194 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 250
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 251 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 297
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 298 IVSILDKLIRNPGSLKI 314
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V EY+ NG+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG SR
Sbjct: 147 -----------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 252
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 253 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 299
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 300 IVSILDKLIRNPGSLKI 316
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 5 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V EY+ NG+L + H
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 117
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG SR
Sbjct: 118 -----------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 166
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 167 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 223
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 224 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 270
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 271 IVSILDKLIRNPGSLKI 287
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 34/250 (13%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAI--DKTQIEQF 377
A+IF EL++ + LG G FGTV+KG+ +P+G + + + DK+ + F
Sbjct: 7 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 59
Query: 378 ---INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXX 434
+ ++ + ++H HIV+LLG C + + LV +Y+ G+L H+ H
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLL- 117
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ ++A + Y+ + HR++ + N+LL +V+DFG
Sbjct: 118 --------------LNWGVQIAKGMYYLEEHGMV---HRNLAARNVLLKSPSQVQVADFG 160
Query: 495 TSRSVP-NDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+ +P +DK L + + + E +YT +SDV+S+GV + EL+T G +P
Sbjct: 161 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 220
Query: 553 TREEEERNLV 562
R E +L+
Sbjct: 221 LRLAEVPDLL 230
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V EY+ NG+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG SR
Sbjct: 147 -----------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 252
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 253 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 299
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 300 IVSILDKLIRNPGSLKI 316
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V EY+ NG+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG SR
Sbjct: 147 -----------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 252
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 253 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 299
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 300 IVSILDKLIRNPGSLKI 316
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V EY+ NG+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG SR
Sbjct: 147 -----------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 252
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 253 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 299
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 300 IVSILDKLIRNPGSLKI 316
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 140
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 141 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 257
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 258 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 140
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 141 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 257
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 258 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 112/252 (44%), Gaps = 43/252 (17%)
Query: 309 QQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSR 367
++ L+S +E++K + Q A +++ R LG+G FG VY I+A+K
Sbjct: 5 EEELASKQKNEESK-----KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--- 56
Query: 368 AIDKTQIE------QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHI 421
+ K Q+E Q EV I S + H +I++L G + L+ EY GT+ +
Sbjct: 57 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 116
Query: 422 HDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSS 478
+ R A E+A A++Y HS + HRDIK
Sbjct: 117 QK-------------------LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE 154
Query: 479 NILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGV 538
N+LL K++DFG S P+ + T + GT Y PE + + +K D++S GV
Sbjct: 155 NLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 211
Query: 539 VLLELLTGKKPI 550
+ E L GK P
Sbjct: 212 LCYEFLVGKPPF 223
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 112/252 (44%), Gaps = 43/252 (17%)
Query: 309 QQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSR 367
++ L+S +E++K + Q A +++ R LG+G FG VY I+A+K
Sbjct: 14 EEELASKQKNEESK-----KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--- 65
Query: 368 AIDKTQIE------QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHI 421
+ K Q+E Q EV I S + H +I++L G + L+ EY GT+ +
Sbjct: 66 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 125
Query: 422 HDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSS 478
+ R A E+A A++Y HS + HRDIK
Sbjct: 126 QK-------------------LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE 163
Query: 479 NILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGV 538
N+LL K++DFG S P+ + T + GT Y PE + + +K D++S GV
Sbjct: 164 NLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 220
Query: 539 VLLELLTGKKPI 550
+ E L GK P
Sbjct: 221 LCYEFLVGKPPF 232
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 133/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL---------------LQYTSQ 123
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HR++ + NIL++++ K+ DFG ++ +P DK + G
Sbjct: 124 ICKGMEYLGTKRYI---HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES 180
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 181 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 240
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 241 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 291
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 133/302 (44%), Gaps = 45/302 (14%)
Query: 340 RFLGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
R LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 395 LLGCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
G C L+ E++ G+L ++ H ++
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL---------------LQYT 123
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQG 512
++ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 124 SQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 513 T--FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNL 561
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 240
Query: 562 VAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEG 621
V + I L K N L D + + + C N +RP+ + +++ ++
Sbjct: 241 VFHLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQ 291
Query: 622 LR 623
+R
Sbjct: 292 IR 293
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G +VAVK+ + + + F E+ IL + H +IVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G C L+ EY+ G+L ++ H ++ +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL---------------LQYTSQ 125
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT- 513
+ + Y+ + I HRD+ + NIL++++ K+ DFG ++ +P DK G
Sbjct: 126 ICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 514 -FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT----GKKPIC-----LTREEEERNLVA 563
++ PE S+++ SDV+SFGVVL EL T K P + +++ + +V
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 242
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
+ I L K N L D + + + C N +RP+ + +++ ++ +R
Sbjct: 243 HLIELLKNNGRLPRPDGCP---------DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V G VA+K + ++ ++FI E ++ ++H +V+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ EY++NG L +++ + + + +V A+ Y
Sbjct: 91 QRPIFIITEYMANGCLLNYLRE---------------MRHRFQTQQLLEMCKDVCEAMEY 135
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ S HRD+ + N L++D+ KVSDFG SR V +D+ + + + PE
Sbjct: 136 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEV 192
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
S+++ KSD+++FGV++ E+ + GK P
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 35/226 (15%)
Query: 337 NQSRFLGQGGFGTVYKGMLPDGSI----VAVKR-SRAIDKTQIEQFINEVVILSQINHRH 391
+ R +G+G FG VY G D + A+K SR + Q+E F+ E +++ +NH +
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 392 IVKLLGCCLETE-VPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
++ L+G L E +P ++ Y+ +G L I + +
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS---------------PQRNPTVKDLIS 128
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK------- 503
+VA + Y+ A HRD+ + N +LD+ F+ KV+DFG +R + + +
Sbjct: 129 FGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQH 185
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
H V+ T E Q+ ++T KSDV+SFGV+L ELLT P
Sbjct: 186 RHARLPVKWT----ALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY + I+A+K + K Q+E Q EV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALK---VLFKAQLEKAGVEHQLRREVE 60
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G ++ L+ EY GT+ +
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQK------------------- 101
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKKVI---HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + A+ GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 159 PSSR---RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V G VA+K + ++ ++FI E ++ ++H +V+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ EY++NG L +++ + + + +V A+ Y
Sbjct: 71 QRPIFIITEYMANGCLLNYLRE---------------MRHRFQTQQLLEMCKDVCEAMEY 115
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ S HRD+ + N L++D+ KVSDFG SR V +D+ + + + PE
Sbjct: 116 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 172
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
S+++ KSD+++FGV++ E+ + GK P
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 61
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 102
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 103 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHA 159
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 160 PSSR---RTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V G VA+K + ++ ++FI E ++ ++H +V+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ EY++NG L +++ + + + +V A+ Y
Sbjct: 76 QRPIFIITEYMANGCLLNYLRE---------------MRHRFQTQQLLEMCKDVCEAMEY 120
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ S HRD+ + N L++D+ KVSDFG SR V +D+ + + + PE
Sbjct: 121 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 177
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
S+++ KSD+++FGV++ E+ + GK P
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V G VA+K + ++ ++FI E ++ ++H +V+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ EY++NG L +++ + + + +V A+ Y
Sbjct: 91 QRPIFIITEYMANGCLLNYLRE---------------MRHRFQTQQLLEMCKDVCEAMEY 135
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ S HRD+ + N L++D+ KVSDFG SR V +D+ + + + PE
Sbjct: 136 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 192
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
S+++ KSD+++FGV++ E+ + GK P
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V G VA+K + ++ ++FI E ++ ++H +V+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ EY++NG L +++ + + + +V A+ Y
Sbjct: 75 QRPIFIITEYMANGCLLNYLRE---------------MRHRFQTQQLLEMCKDVCEAMEY 119
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ S HRD+ + N L++D+ KVSDFG SR V +D+ + + + PE
Sbjct: 120 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 176
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
S+++ KSD+++FGV++ E+ + GK P
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ +I H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------------VDMAAQIASGMAY 129
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 130 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 231
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R + ++RPT + + LE
Sbjct: 232 YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V G VA+K + ++ ++FI E ++ ++H +V+L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ EY++NG L +++ + + + +V A+ Y
Sbjct: 82 QRPIFIITEYMANGCLLNYLRE---------------MRHRFQTQQLLEMCKDVCEAMEY 126
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ S HRD+ + N L++D+ KVSDFG SR V +D+ + + + PE
Sbjct: 127 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 183
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
S+++ KSD+++FGV++ E+ + GK P
Sbjct: 184 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQL--------------VDMAAQIASGMAY 129
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 130 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEA 186
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 231
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R + ++RPT + + LE
Sbjct: 232 YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 63
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 104
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 162 PSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 65
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 106
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 164 PSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 60
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 101
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 159 PSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 141/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V EY+ NG+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG +R
Sbjct: 147 -----------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLAR 195
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 252
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 253 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 299
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 300 IVSILDKLIRNPGSLKI 316
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V G VA+K + ++ ++FI E ++ ++H +V+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
++ EY++NG L +++ + + + +V A+ Y
Sbjct: 76 QRPIFIITEYMANGCLLNYLRE---------------MRHRFQTQQLLEMCKDVCEAMEY 120
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ S HRD+ + N L++D+ KVSDFG SR V +D+ + + + PE
Sbjct: 121 LESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEV 177
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
S+++ KSD+++FGV++ E+ + GK P
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 26/218 (11%)
Query: 340 RFLGQGGFGTVYKGML--PDGSIVAVK-RSRAIDKT--QIEQFINEVVILSQINHRHIVK 394
R +G G FG V G L P VAV ++ + T Q F+ E I+ Q +H ++V
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
L G + ++V E++ NG L + H +++
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV------------------IQLVGM 150
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
+ G A M A + HRD+ + NIL++ KVSDFG SR + +D + T G
Sbjct: 151 LRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI 210
Query: 515 G--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ PE Q ++T SDV+S+G+V+ E+++ G++P
Sbjct: 211 PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 63
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 104
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 162 PSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 59
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 60 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 100
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 101 LSKFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 157
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 158 PSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 205
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 60
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 101
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 159 PSSR---RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 63
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 104
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + A+ GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 162 PSSR---RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 74 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------------VDMAAQIASGMAY 118
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 119 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 175
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 176 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 220
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R + ++RPT + + LE
Sbjct: 221 YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------------VDMAAQIASGMAY 120
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 121 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 177
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 222
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R + ++RPT + + LE
Sbjct: 223 YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQL--------------VDMAAQIASGMAY 119
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 120 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEA 176
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
++T KSDV+SFG++L EL T G+ P
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 64
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 105
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 106 LSKFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 162
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 163 PSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 24/216 (11%)
Query: 336 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
Y + +GQG GTVY M + G VA+++ + + E INE++++ + + +IV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC- 453
L L + +V EY++ G+L+ + + ++ C
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE------------------TCMDEGQIAAVCR 123
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
E A+ ++HS + HRDIKS NILL S K++DFG + +++ +T V GT
Sbjct: 124 ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GT 179
Query: 514 FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ PE Y K D++S G++ +E++ G+ P
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 60
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 101
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + A+ GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 159 PSSR---RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V EY+ NG+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV------- 146
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG R
Sbjct: 147 -----------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGR 195
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 252
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 253 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 299
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 300 IVSILDKLIRNPGSLKI 316
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 65
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 106
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 164 PSSR---RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 60
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 101
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 159 PSSR---RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQL--------------VDMAAQIASGMAY 129
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 130 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 231
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R + ++RPT + + LE
Sbjct: 232 YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 60
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 101
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 159 PSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 60
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 101
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 159 PSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 61
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 102
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 103 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 159
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 160 PSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------------VDMAAQIASGMAY 129
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 130 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 231
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R + ++RPT + + LE
Sbjct: 232 YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + + + E F+ E ++ ++ H +V+L E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 252 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------------VDMAAQIASGMAY 296
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG R + +++ + + PE
Sbjct: 297 VERMNYV---HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEA 353
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 354 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 398
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R + ++RPT + + LE
Sbjct: 399 YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 338 QSRFLGQGGFGTVYKG-----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
+ + LG G FGTV KG + V + ++ A D ++ + E ++ Q+++ +I
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V+++G C E E +LV E G L+ ++ + N + +
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----------------NIIELV 133
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQG 512
+V+ + Y+ + + HRD+ + N+LL + AK+SDFG S+++ D+ + G
Sbjct: 134 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 513 TF--GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ ++ PE +++ KSDV+SFGV++ E + G+KP
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 338 QSRFLGQGGFGTVYKG-----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
+ + LG G FGTV KG + V + ++ A D ++ + E ++ Q+++ +I
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V+++G C E E +LV E G L+ ++ + N + +
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----------------NIIELV 133
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQG 512
+V+ + Y+ + + HRD+ + N+LL + AK+SDFG S+++ D+ + G
Sbjct: 134 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 513 TF--GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ ++ PE +++ KSDV+SFGV++ E + G+KP
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQL--------------VDMAAQIASGMAY 129
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 130 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 231
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R + ++RPT + + LE
Sbjct: 232 YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 338 QSRFLGQGGFGTVYKG-----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
+ + LG G FGTV KG + V + ++ A D ++ + E ++ Q+++ +I
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V+++G C E E +LV E G L+ ++ + N + +
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----------------NIIELV 123
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQG 512
+V+ + Y+ + + HRD+ + N+LL + AK+SDFG S+++ D+ + G
Sbjct: 124 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180
Query: 513 TF--GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ ++ PE +++ KSDV+SFGV++ E + G+KP
Sbjct: 181 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 65
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 106
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 164 PSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G L + V +A ++A +AY
Sbjct: 85 EPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQL--------------VDMAAQIASGMAY 129
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 130 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 231
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R + ++RPT + + LE
Sbjct: 232 YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL--------------VDMAAQIASGMAY 122
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 123 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 179
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
++T KSDV+SFG++L EL T G+ P
Sbjct: 180 ALYGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 338 QSRFLGQGGFGTVYKG-----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
+ + LG G FGTV KG + V + ++ A D ++ + E ++ Q+++ +I
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V+++G C E E +LV E G L+ ++ + N + +
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----------------NIIELV 111
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQG 512
+V+ + Y+ + + HRD+ + N+LL + AK+SDFG S+++ D+ + G
Sbjct: 112 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 168
Query: 513 TF--GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ ++ PE +++ KSDV+SFGV++ E + G+KP
Sbjct: 169 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 65
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY G + +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK------------------- 106
Query: 443 XXXXNRVRVAC---EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 164 PSSRR---TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 338 QSRFLGQGGFGTVYKG-----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
+ + LG G FGTV KG + V + ++ A D ++ + E ++ Q+++ +I
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V+++G C E E +LV E G L+ ++ + N + +
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----------------NIIELV 113
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQG 512
+V+ + Y+ + + HRD+ + N+LL + AK+SDFG S+++ D+ + G
Sbjct: 114 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 170
Query: 513 TF--GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ ++ PE +++ KSDV+SFGV++ E + G+KP
Sbjct: 171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALK---VLFKAQLEKAGVEHQLRREVE 57
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 58 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 98
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 99 LSKFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 155
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 156 PSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 203
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 338 QSRFLGQGGFGTVYKG-----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
+ + LG G FGTV KG + V + ++ A D ++ + E ++ Q+++ +I
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V+++G C E E +LV E G L+ ++ + N + +
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----------------NIIELV 117
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQG 512
+V+ + Y+ + + HRD+ + N+LL + AK+SDFG S+++ D+ + G
Sbjct: 118 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 174
Query: 513 TF--GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ ++ PE +++ KSDV+SFGV++ E + G+KP
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G L + V +A ++A +AY
Sbjct: 85 EPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQL--------------VDMAAQIASGMAY 129
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 130 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 231
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R + ++RPT + + LE
Sbjct: 232 YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 86
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 87 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 132
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ D S K++DFG +R + +++ + + PE
Sbjct: 133 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 189
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 190 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 85
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 86 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 131
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ D S K++DFG +R + +++ + + PE
Sbjct: 132 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 188
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 189 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 83
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 84 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 129
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ D S K++DFG +R + +++ + + PE
Sbjct: 130 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 186
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 77
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 78 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 123
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ D S K++DFG +R + +++ + + PE
Sbjct: 124 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 78
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 79 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 124
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ D S K++DFG +R + +++ + + PE
Sbjct: 125 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 181
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 182 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 77
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 78 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 123
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ D S K++DFG +R + +++ + + PE
Sbjct: 124 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 79
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 80 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 125
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ D S K++DFG +R + +++ + + PE
Sbjct: 126 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 182
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 183 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 338 QSRFLGQGGFGTVYKG-----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
+ + LG G FGTV KG + V + ++ A D ++ + E ++ Q+++ +I
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V+++G C E E +LV E G L+ ++ + N + +
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----------------NIIELV 131
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQG 512
+V+ + Y+ + + HRD+ + N+LL + AK+SDFG S+++ D+ + G
Sbjct: 132 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 188
Query: 513 TF--GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ ++ PE +++ KSDV+SFGV++ E + G+KP
Sbjct: 189 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 135/309 (43%), Gaps = 44/309 (14%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVK--RSRAIDKT 372
+ ++ +E + + + R LGQG FG VY+G D + VAVK A +
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 373 QIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
+IE F+NE ++ H+V+LLG + + ++V E +++G L ++
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR------SLRP 116
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
+++A E+A +AY+++ + HRD+ + N ++ F+ K+ D
Sbjct: 117 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGD 173
Query: 493 FGTSRSVPNDKTHLTTAVQGTFG-----YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-G 546
FG +R D +G G + PE + +T SD++SFGVVL E+ +
Sbjct: 174 FGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 547 KKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNS 606
++P + L+ E L ++D + + E V +L C + N
Sbjct: 230 EQP---------------YQGLSNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNP 273
Query: 607 KKRPTMKQV 615
RPT ++
Sbjct: 274 NMRPTFLEI 282
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 123/291 (42%), Gaps = 40/291 (13%)
Query: 342 LGQGGFGTVYKGML-PDGSIVAVKRSRAIDKTQIE-QFINEVVILSQINHRHIVKLLGCC 399
+G+G FG V+ G L D ++VAVK R ++ +F+ E IL Q +H +IV+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 400 LETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAG-A 458
+ + +V E + G + RV+ ++ G A
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARL-------------------RVKTLLQMVGDA 222
Query: 459 VAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAV-QGTFGYF 517
A M S HRD+ + N L+ +K K+SDFG SR + + + Q +
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT 282
Query: 518 DPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLE 576
PE +Y+ +SDV+SFG++L E + G P ++ R V K +L
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV------EKGGRL-- 334
Query: 577 ILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRSQR 627
E +AV L C +RP+ + +L+ +R+ R
Sbjct: 335 --------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 137/329 (41%), Gaps = 38/329 (11%)
Query: 317 SSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRA-I 369
S + KI + + N + LG+G FG V K + VAVK +
Sbjct: 6 SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 370 DKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX-- 427
+++ ++E +L Q+NH H++KL G C + +L+ EY G+L + +
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 428 ------XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNIL 481
+ + A +++ + Y+ A + + HRD+ + NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNIL 182
Query: 482 LDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF--GYFDPEYFQSSQYTDKSDVYSFGVV 539
+ + K+SDFG SR V + +++ + QG + E YT +SDV+SFGV+
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSYVKRS-QGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 540 LLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELA 598
L E++T G P + + E +L +L E + E + L
Sbjct: 242 LWEIVTLGGNP---------------YPGIPPE-RLFNLLKTGHRMERPDNCSEEMYRLM 285
Query: 599 MGCLRLNSKKRPTMKQVSMDLEGLRRSQR 627
+ C + KRP +S DLE + +R
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKMMVKRR 314
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 123/291 (42%), Gaps = 40/291 (13%)
Query: 342 LGQGGFGTVYKGML-PDGSIVAVKRSRAIDKTQIE-QFINEVVILSQINHRHIVKLLGCC 399
+G+G FG V+ G L D ++VAVK R ++ +F+ E IL Q +H +IV+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 400 LETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAG-A 458
+ + +V E + G + RV+ ++ G A
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARL-------------------RVKTLLQMVGDA 222
Query: 459 VAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAV-QGTFGYF 517
A M S HRD+ + N L+ +K K+SDFG SR + + + Q +
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT 282
Query: 518 DPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLE 576
PE +Y+ +SDV+SFG++L E + G P ++ R V K +L
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV------EKGGRL-- 334
Query: 577 ILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRSQR 627
E +AV L C +RP+ + +L+ +R+ R
Sbjct: 335 --------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 129/287 (44%), Gaps = 38/287 (13%)
Query: 340 RFLGQGGFGTVYKGMLPD------GSIVAVK--RSRAIDKTQIEQFINEVVILSQINHRH 391
R LGQG FG VY+G D + VAVK A + +IE F+NE ++ H
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEASVMKGFTCHH 80
Query: 392 IVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
+V+LLG + + ++V E +++G L ++ +++
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLR------SLRPEAENNPGRPPPTLQEMIQM 134
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQ 511
A E+A +AY+++ + HRD+ + N ++ F+ K+ DFG +R + + + +
Sbjct: 135 AAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGK 190
Query: 512 GTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISL 568
G + PE + +T SD++SFGVVL E+ + ++P + L
Sbjct: 191 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP---------------YQGL 235
Query: 569 AKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
+ E L ++D + + E V +L C + N K RPT ++
Sbjct: 236 SNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEI 281
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 82
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 83 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 128
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ D S K++DFG +R + +++ + + PE
Sbjct: 129 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 185
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 186 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 22/239 (9%)
Query: 313 SSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKT 372
S + + K + +E + + LG G FG V+ G + VAVK S
Sbjct: 2 SHMQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVK-SLKQGSM 60
Query: 373 QIEQFINEVVILSQINHRHIVKLLGCCLETEVPV-LVYEYISNGTLSHHIHDHXXXXXXX 431
+ F+ E ++ Q+ H+ +V+L T+ P+ ++ EY+ NG+L +
Sbjct: 61 SPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLK--------- 109
Query: 432 XXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVS 491
+ +A ++A +A++ I HRD++++NIL+ D S K++
Sbjct: 110 -----TPSGIKLTINKLLDMAAQIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIA 161
Query: 492 DFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
DFG +R + +++ + + PE +T KSDV+SFG++L E++T G+ P
Sbjct: 162 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 83
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 84 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 129
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ D S K++DFG +R + +++ + + PE
Sbjct: 130 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 186
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 334 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL--------------VDMAAQIASGMAY 378
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 379 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 435
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 436 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 480
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R ++RPT + + LE
Sbjct: 481 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 65
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY G + +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK------------------- 106
Query: 443 XXXXNRVRVAC---EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 164 PSSRR---XXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL--------------VDMAAQIASGMAY 295
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 296 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 352
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 397
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R ++RPT + + LE
Sbjct: 398 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL--------------VDMAAQIASGMAY 295
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 296 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 352
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 397
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R ++RPT + + LE
Sbjct: 398 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 43/252 (17%)
Query: 309 QQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSR 367
++ L+S +E++K + Q A +++ R LG+G FG VY I+A+K
Sbjct: 14 EEELASKQKNEESK-----KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK--- 65
Query: 368 AIDKTQIE------QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHI 421
+ K Q+E Q EV I S + H +I++L G + L+ EY GT+ +
Sbjct: 66 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 125
Query: 422 HDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSS 478
+ R A E+A A++Y HS + HRDIK
Sbjct: 126 QK-------------------LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPE 163
Query: 479 NILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGV 538
N+LL K++DFG S P+ + + GT Y PE + + +K D++S GV
Sbjct: 164 NLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 220
Query: 539 VLLELLTGKKPI 550
+ E L GK P
Sbjct: 221 LCYEFLVGKPPF 232
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL--------------VDMAAQIASGMAY 129
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD+ ++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 130 VERMNYV---HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 186
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 231
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R + ++RPT + + LE
Sbjct: 232 YRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 77
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 78 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 123
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ D S K++DFG +R + +++ + + PE
Sbjct: 124 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 180
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 62
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 103
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K+++FG S
Sbjct: 104 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHA 160
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 161 PSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 72
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 73 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 118
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ D S K++DFG +R + +++ + + PE
Sbjct: 119 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 176 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V E + NG+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV------- 146
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG SR
Sbjct: 147 -----------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 252
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 253 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 299
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 300 IVSILDKLIRNPGSLKI 316
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 63
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 104
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K+++FG S
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIANFGWSVHA 161
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 162 PSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 5 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V E + NG+L + H
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV------- 117
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG SR
Sbjct: 118 -----------IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 166
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 167 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 223
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 224 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 270
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 271 IVSILDKLIRNPGSLKI 287
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 62
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 103
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 104 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 160
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 161 PSSR---RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 338 QSRFLGQGGFGTVYKG-----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
+ + LG G FGTV KG + V + ++ A D ++ + E ++ Q+++ +I
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V+++G C E E +LV E G L+ ++ + N + +
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----------------NIIELV 117
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQG 512
+V+ + Y+ + + HRD+ + N+LL + AK+SDFG S+++ D+ G
Sbjct: 118 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG 174
Query: 513 TF--GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ ++ PE +++ KSDV+SFGV++ E + G+KP
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 140/317 (44%), Gaps = 44/317 (13%)
Query: 325 TAEELQRATDNYNQS--RFLGQGGFGTVYKGMLPDGS----IVAVKRSR-AIDKTQIEQF 377
T E + D N S + +G G FG V G L S VA+K + + Q F
Sbjct: 34 TVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 378 INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
+ E I+ Q +H +I++L G +++ ++V E + NG+L + H
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV------- 146
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+++ + G + M + + HRD+ + NIL++ KVSDFG SR
Sbjct: 147 -----------IQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 498 SVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTR 554
+ +D T G + PE ++T SDV+S+G+VL E+++ G++P
Sbjct: 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--- 252
Query: 555 EEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQ 614
E ++++ ++ + +L +D A+ +L + C + + RP +Q
Sbjct: 253 EMSNQDVIK---AVDEGYRLPPPMDCPA----------ALYQLMLDCWQKDRNNRPKFEQ 299
Query: 615 VSMDLEGLRRSQRCVEI 631
+ L+ L R+ ++I
Sbjct: 300 IVSILDKLIRNPGSLKI 316
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 336 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
Y + +GQG GTVY M + G VA+++ + + E INE++++ + + +IV
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC- 453
L L + +V EY++ G+L+ + + ++ C
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTE------------------TCMDEGQIAAVCR 124
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
E A+ ++HS + HRDIKS NILL S K++DFG + +++ + V GT
Sbjct: 125 ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GT 180
Query: 514 FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ PE Y K D++S G++ +E++ G+ P
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 24/216 (11%)
Query: 336 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
Y + +GQG GTVY M + G VA+++ + + E INE++++ + + +IV
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC- 453
L L + +V EY++ G+L+ + + ++ C
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTE------------------TCMDEGQIAAVCR 124
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
E A+ ++HS + HR+IKS NILL S K++DFG + +++ +T V GT
Sbjct: 125 ECLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GT 180
Query: 514 FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ PE Y K D++S G++ +E++ G+ P
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 61
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 102
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS + HRDIK N+LL K++DFG S
Sbjct: 103 LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 159
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 160 PSSR---RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY+S G+L + V +A ++A +AY
Sbjct: 251 EPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQL--------------VDMAAQIASGMAY 295
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 296 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 352
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 397
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R ++RPT + + LE
Sbjct: 398 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 336 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
Y + +GQG GTVY M + G VA+++ + + E INE++++ + + +IV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC- 453
L L + +V EY++ G+L+ + + ++ C
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE------------------TCMDEGQIAAVCR 123
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
E A+ ++HS + HRDIKS NILL S K++DFG + +++ + V GT
Sbjct: 124 ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GT 179
Query: 514 FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ PE Y K D++S G++ +E++ G+ P
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 26/215 (12%)
Query: 342 LGQGGFGTVYKG---MLPDGSIVAVK-RSRAIDKTQIEQFINEVVILSQINHRHIVKLLG 397
LG G FG+V +G M VA+K + +K E+ + E I+ Q+++ +IV+L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 398 CCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAG 457
C + E +LV E G L + N + +V+
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFL---------------VGKREEIPVSNVAELLHQVSM 121
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF--G 515
+ Y+ + HRD+ + N+LL ++ AK+SDFG S+++ D ++ T G +
Sbjct: 122 GMKYLEEKNFV---HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 178
Query: 516 YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
++ PE +++ +SDV+S+GV + E L+ G+KP
Sbjct: 179 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 60
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 101
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 102 LSKFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 159 PSSR---RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 136/329 (41%), Gaps = 38/329 (11%)
Query: 317 SSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRA-I 369
S + KI + + N + LG+G FG V K + VAVK +
Sbjct: 6 SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 370 DKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX-- 427
+++ ++E +L Q+NH H++KL G C + +L+ EY G+L + +
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 428 ------XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNIL 481
+ + A +++ + Y+ A + + HRD+ + NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNIL 182
Query: 482 LDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF--GYFDPEYFQSSQYTDKSDVYSFGVV 539
+ + K+SDFG SR V + + + + QG + E YT +SDV+SFGV+
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVKRS-QGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 540 LLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELA 598
L E++T G P + + E +L +L E + E + L
Sbjct: 242 LWEIVTLGGNP---------------YPGIPPE-RLFNLLKTGHRMERPDNCSEEMYRLM 285
Query: 599 MGCLRLNSKKRPTMKQVSMDLEGLRRSQR 627
+ C + KRP +S DLE + +R
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKMMVKRR 314
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 63
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 104
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 162 PSSR---RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 136/329 (41%), Gaps = 38/329 (11%)
Query: 317 SSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRA-I 369
S + KI + + N + LG+G FG V K + VAVK +
Sbjct: 6 SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 370 DKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX-- 427
+++ ++E +L Q+NH H++KL G C + +L+ EY G+L + +
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 428 ------XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNIL 481
+ + A +++ + Y+ A + + HRD+ + NIL
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNIL 182
Query: 482 LDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF--GYFDPEYFQSSQYTDKSDVYSFGVV 539
+ + K+SDFG SR V + + + + QG + E YT +SDV+SFGV+
Sbjct: 183 VAEGRKMKISDFGLSRDVYEEDSXVKRS-QGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 540 LLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELA 598
L E++T G P + + E +L +L E + E + L
Sbjct: 242 LWEIVTLGGNP---------------YPGIPPE-RLFNLLKTGHRMERPDNCSEEMYRLM 285
Query: 599 MGCLRLNSKKRPTMKQVSMDLEGLRRSQR 627
+ C + KRP +S DLE + +R
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKMMVKRR 314
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 336 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
Y + +GQG GTVY M + G VA+++ + + E INE++++ + + +IV
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC- 453
L L + +V EY++ G+L+ + + ++ C
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE------------------TCMDEGQIAAVCR 123
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
E A+ ++HS + HRDIKS NILL S K++DFG + +++ + V GT
Sbjct: 124 ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GT 179
Query: 514 FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ PE Y K D++S G++ +E++ G+ P
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q ++++ R LG+G FG VY I+A+K + KTQ+E Q EV
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALK---VLFKTQLEKAGVEHQLRREVE 64
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 105
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 106 LSRFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSNGELKIADFGWSVHA 162
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + T + GT Y PE + + +K D++S GV+ E L G P
Sbjct: 163 PSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 136/306 (44%), Gaps = 38/306 (12%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVK--RSRAIDKT 372
+ ++ +E + + + R LGQG FG VY+G D + VAVK A +
Sbjct: 5 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 64
Query: 373 QIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
+IE F+NE ++ H+V+LLG + + ++V E +++G L ++
Sbjct: 65 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR------SLRP 117
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
+++A E+A +AY+++ + HR++ + N ++ F+ K+ D
Sbjct: 118 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGD 174
Query: 493 FGTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
FG +R + + + +G + PE + +T SD++SFGVVL E+ + ++P
Sbjct: 175 FGMTRDI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 233
Query: 550 ICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKR 609
+ L+ E L ++D + + E V +L C + N R
Sbjct: 234 ---------------YQGLSNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNPNMR 277
Query: 610 PTMKQV 615
PT ++
Sbjct: 278 PTFLEI 283
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 338 QSRFLGQGGFGTVYKG-----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
+ + LG G FGTV KG + V + ++ A D ++ + E ++ Q+++ +I
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V+++G C E E +LV E G L+ ++ + N + +
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----------------NIIELV 475
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQG 512
+V+ + Y+ + + HRD+ + N+LL + AK+SDFG S+++ D+ + G
Sbjct: 476 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 532
Query: 513 TF--GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ ++ PE +++ KSDV+SFGV++ E + G+KP
Sbjct: 533 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 338 QSRFLGQGGFGTVYKG-----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
+ + LG G FGTV KG + V + ++ A D ++ + E ++ Q+++ +I
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V+++G C E E +LV E G L+ ++ + N + +
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDK----------------NIIELV 476
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQG 512
+V+ + Y+ + + HRD+ + N+LL + AK+SDFG S+++ D+ + G
Sbjct: 477 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 533
Query: 513 TF--GYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ ++ PE +++ KSDV+SFGV++ E + G+KP
Sbjct: 534 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 136/306 (44%), Gaps = 38/306 (12%)
Query: 321 AKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVK--RSRAIDKT 372
+ ++ +E + + + R LGQG FG VY+G D + VAVK A +
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 373 QIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
+IE F+NE ++ H+V+LLG + + ++V E +++G L ++
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR------SLRP 116
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
+++A E+A +AY+++ + HR++ + N ++ F+ K+ D
Sbjct: 117 EAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGD 173
Query: 493 FGTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
FG +R + + + +G + PE + +T SD++SFGVVL E+ + ++P
Sbjct: 174 FGMTRDI-YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP 232
Query: 550 ICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKR 609
+ L+ E L ++D + + E V +L C + N R
Sbjct: 233 ---------------YQGLSNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNPNMR 276
Query: 610 PTMKQV 615
PT ++
Sbjct: 277 PTFLEI 282
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY++ G+L + V ++ ++A +AY
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQL--------------VDMSAQIASGMAY 126
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 127 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEA 183
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 228
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R ++RPT + + LE
Sbjct: 229 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q A +++ R LG+G FG VY I+A+K + K Q+E Q EV
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK---VLFKAQLEKAGVEHQLRREVE 63
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 104
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 105 LSKFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + + GT Y PE + + +K D++S GV+ E L GK P
Sbjct: 162 PSSR---RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 34/279 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LGQG FG V+ G + VA+K + E F+ E ++ ++ H +V+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
+ +V EY++ G+L + V ++ ++A +AY
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQL--------------VDMSAQIASGMAY 126
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ + HRD++++NIL+ + KV+DFG +R + +++ + + PE
Sbjct: 127 VERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA 183
Query: 522 FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDAR 581
++T KSDV+SFG++L EL T + V Y + +E +L+ ++
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTT-------------KGRVPYPGMVNRE--VLDQVERG 228
Query: 582 VAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
E E++ +L C R ++RPT + + LE
Sbjct: 229 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 36/216 (16%)
Query: 342 LGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCL 400
LG+G +G+VYK + + G IVA+K+ ++ +++ I E+ I+ Q + H+VK G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPV--ESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 401 ETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA---- 456
+ +V EY G++S I N+ E+A
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIR----------------------LRNKTLTEDEIATILQ 132
Query: 457 ---GAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
+ Y+H I HRDIK+ NILL+ + AK++DFG + + D V GT
Sbjct: 133 STLKGLEYLHFMRKI---HRDIKAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNXVIGT 188
Query: 514 FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ PE Q Y +D++S G+ +E+ GK P
Sbjct: 189 PFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 138/322 (42%), Gaps = 51/322 (15%)
Query: 321 AKIFTAEELQRATDNYNQS---------RFLGQGGFGTVYKGML----PDGSIVAVKRSR 367
A+ T EE RA ++ + + +G G G V G L VA+K +
Sbjct: 27 AEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK 86
Query: 368 A-IDKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXX 426
A + Q F++E I+ Q +H +I++L G + ++V EY+ NG+L + H
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG 146
Query: 427 XXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF 486
+++ + G A M + + HRD+ + N+L+D
Sbjct: 147 QFTI------------------MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL 188
Query: 487 SAKVSDFGTSRSVPN--DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELL 544
KVSDFG SR + + D + TT + + PE ++ SDV+SFGVV+ E+L
Sbjct: 189 VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
Query: 545 T-GKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLR 603
G++P R++++ S+ + +L + A+ +L + C
Sbjct: 249 AYGERPYW---NMTNRDVIS---SVEEGYRLPAPMGC----------PHALHQLMLDCWH 292
Query: 604 LNSKKRPTMKQVSMDLEGLRRS 625
+ +RP Q+ L+ L RS
Sbjct: 293 KDRAQRPRFSQIVSVLDALIRS 314
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 38/269 (14%)
Query: 361 VAVKRSRA-IDKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSH 419
VA+K +A + Q F++E I+ Q +H +I++L G + ++V EY+ NG+L
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 420 HIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSN 479
+ H +++ + G A M + + HRD+ + N
Sbjct: 140 FLRTHDGQFTI------------------MQLVGMLRGVGAGMRYLSDLGYVHRDLAARN 181
Query: 480 ILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFG--YFDPEYFQSSQYTDKSDVYSFG 537
+L+D KVSDFG SR + +D T G + PE ++ SDV+SFG
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 538 VVLLELLT-GKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAE 596
VV+ E+L G++P R++++ S+ + +L + A+ +
Sbjct: 242 VVMWEVLAYGERPYW---NMTNRDVIS---SVEEGYRLPAPMGC----------PHALHQ 285
Query: 597 LAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
L + C + +RP Q+ L+ L RS
Sbjct: 286 LMLDCWHKDRAQRPRFSQIVSVLDALIRS 314
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 73
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 74 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 119
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HR+++++NIL+ D S K++DFG +R + +++ + + PE
Sbjct: 120 FIEERNYI---HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 176
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 177 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 134/294 (45%), Gaps = 44/294 (14%)
Query: 342 LGQGGFGTVYKG--MLPDGS--IVAVKRSRA-IDKTQIEQFINEVVILSQINHRHIVKLL 396
+G G FG V G LP VA+K ++ + Q F++E I+ Q +H +++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
G ++ +++ E++ NG+L + + +++ +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV------------------IQLVGMLR 142
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQGTF 514
G A M A + HRD+ + NIL++ KVSDFG SR + +D + T+A+ G
Sbjct: 143 GIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 202
Query: 515 G--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKE 571
+ PE Q ++T SDV+S+G+V+ E+++ G++P ++ N ++ ++
Sbjct: 203 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN------AIEQD 256
Query: 572 NKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
+L +D A+ +L + C + + RP Q+ L+ + R+
Sbjct: 257 YRLPPPMDCP----------SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 300
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 26/215 (12%)
Query: 342 LGQGGFGTVYKG---MLPDGSIVAVK-RSRAIDKTQIEQFINEVVILSQINHRHIVKLLG 397
LG G FG+V +G M VA+K + +K E+ + E I+ Q+++ +IV+L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 398 CCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAG 457
C + E +LV E G L + N + +V+
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFL---------------VGKREEIPVSNVAELLHQVSM 447
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF--G 515
+ Y+ + HR++ + N+LL ++ AK+SDFG S+++ D ++ T G +
Sbjct: 448 GMKYLEEKNFV---HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK 504
Query: 516 YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
++ PE +++ +SDV+S+GV + E L+ G+KP
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 126/309 (40%), Gaps = 45/309 (14%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAI---DKTQIEQFINEVVILSQIN 388
+D Y LG GG V+ L D VAVK RA D + +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 389 HRHIVKLLGCCLETEVPV-----LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
H IV + E E P +V EY+ TL +H
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH----------------TEGPM 113
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ V + A+ + H I HRD+K +NI++ + KV DFG +R++ +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 504 THLT--TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNL 561
+T AV GT Y PE + +SDVYS G VL E+LTG+ P + +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT----GDSPDS 226
Query: 562 VAY-------FISLAKENKLLEILDARVAK---EAREEDIEAVAELAMGCLRLNSKKRPT 611
VAY A+ L LDA V K + E + AE+ +R+++ + P
Sbjct: 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
Query: 612 MKQVSMDLE 620
+V D E
Sbjct: 287 APKVLTDAE 295
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVV 382
Q ++++ R LG+G FG VY I+A+K + KTQ+E Q EV
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALK---VLFKTQLEKAGVEHQLRREVE 64
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
I S + H +I++L G + L+ EY GT+ +
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK------------------- 105
Query: 443 XXXXNRVRVA---CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ R A E+A A++Y HS I HRDIK N+LL K++DFG S
Sbjct: 106 LSRFDEQRTATYITELANALSYCHSKRVI---HRDIKPENLLLGSNGELKIADFGWSVHA 162
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
P+ + + GT Y PE + + +K D++S GV+ E L G P
Sbjct: 163 PSSR---RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 36/219 (16%)
Query: 340 RFLGQGGFGTVY--------KGMLPDGSIVAVKRSRAIDKTQIEQ-FINEVVILSQINHR 390
R LG+G FG V G G +VAVK +A Q + E+ IL + H
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 391 HIVKLLGCCLETEVPVL--VYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
HI+K GCC + L V EY+ G+L ++ H
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL----------------- 136
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
+ A ++ +AY+H+ I HRD+ + N+LLD+ K+ DFG +++VP
Sbjct: 137 LLFAQQICEGMAYLHAQHYI---HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV 193
Query: 509 AVQG--TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
G ++ PE + ++ SDV+SFGV L ELLT
Sbjct: 194 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSRAIDKTQI-EQFINEVV 382
E+QR + R +G+G FG V++G M P+ VA+K + + E+F+ E +
Sbjct: 3 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ Q +H HIVKL+G E V +++ E + G L +
Sbjct: 61 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---------------VRKYS 104
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG SR + +
Sbjct: 105 LDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 161
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPI 550
+ + + + PE ++T SDV+ FGV + E+L G KP
Sbjct: 162 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPD--GSIVAVKRSRAIDKTQI-EQFINEVV 382
E+QR + R +G+G FG V++G M P+ VA+K + + E+F+ E +
Sbjct: 6 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ Q +H HIVKL+G E V +++ E + G L +
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---------------VRKYS 107
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG SR + +
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 164
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + + + PE ++T SDV+ FGV + E+L G KP
Sbjct: 165 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSRAIDKTQI-EQFINEVV 382
E+QR + R +G+G FG V++G M P+ VA+K + + E+F+ E +
Sbjct: 6 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ Q +H HIVKL+G E V +++ E + G L +
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---------------VRKYS 107
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG SR + +
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 164
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + + + PE ++T SDV+ FGV + E+L G KP
Sbjct: 165 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + + VAVK + ++ F+ E ++ + H +V+L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
E ++ EY++ G+L + + + ++A +AY
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL--------------IDFSAQIAEGMAY 125
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD++++N+L+ + K++DFG +R + +++ + + PE
Sbjct: 126 IERKNYI---HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 182
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T GK P
Sbjct: 183 INFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSRAIDKTQI-EQFINEVV 382
E+QR + R +G+G FG V++G M P+ VA+K + + E+F+ E +
Sbjct: 11 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ Q +H HIVKL+G E V +++ E + G L +
Sbjct: 69 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---------------VRKYS 112
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG SR + +
Sbjct: 113 LDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPI 550
+ + + + PE ++T SDV+ FGV + E+L G KP
Sbjct: 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSRAIDKTQI-EQFINEVV 382
E+QR + R +G+G FG V++G M P+ VA+K + + E+F+ E +
Sbjct: 8 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ Q +H HIVKL+G E V +++ E + G L +
Sbjct: 66 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---------------VRKYS 109
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG SR + +
Sbjct: 110 LDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 166
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPI 550
+ + + + PE ++T SDV+ FGV + E+L G KP
Sbjct: 167 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSRAIDKTQI-EQFINEVV 382
E+QR + R +G+G FG V++G M P+ VA+K + + E+F+ E +
Sbjct: 9 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ Q +H HIVKL+G E V +++ E + G L +
Sbjct: 67 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---------------VRKYS 110
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG SR + +
Sbjct: 111 LDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 167
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPI 550
+ + + + PE ++T SDV+ FGV + E+L G KP
Sbjct: 168 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 49/243 (20%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
R ++ + LGQG FG V K D A+K+ R ++ ++ ++EV++L+ +NH
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNH 61
Query: 390 RHIVKLLGCCLETEVPV-------------LVYEYISNGTLSHHIHDHXXXXXXXXXXXX 436
+++V+ LE V + EY NGTL IH
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW-- 119
Query: 437 XXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTS 496
R+ ++ A++Y+HS I HRD+K NI +D+ + K+ DFG +
Sbjct: 120 -------------RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA 163
Query: 497 RSV--------------PNDKTHLTTAVQGTFGYFDPEYFQ-SSQYTDKSDVYSFGVVLL 541
++V P +LT+A+ GT Y E + Y +K D+YS G++
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
Query: 542 ELL 544
E++
Sbjct: 223 EMI 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSRAIDKTQI-EQFINEVV 382
E+QR + R +G+G FG V++G M P+ VA+K + + E+F+ E +
Sbjct: 34 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ Q +H HIVKL+G E V +++ E + G L +
Sbjct: 92 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---------------VRKYS 135
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG SR + +
Sbjct: 136 LDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 192
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPI 550
+ + + + PE ++T SDV+ FGV + E+L G KP
Sbjct: 193 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G G V+ G + VAVK S + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-- 77
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ EY+ NG+L + + +A ++A +A
Sbjct: 78 TQEPIYIITEYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMA 123
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ D S K++DFG +R + + + + + PE
Sbjct: 124 FIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE 180
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L E++T G+ P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPD--GSIVAVKRSRAIDKTQI-EQFINEVV 382
E+QR + R +G+G FG V++G M P+ VA+K + + E+F+ E +
Sbjct: 6 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ Q +H HIVKL+G E V +++ E + G L +
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---------------VRKFS 107
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG SR + +
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 164
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + + PE ++T SDV+ FGV + E+L G KP
Sbjct: 165 TXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPD--GSIVAVKRSRAIDKTQI-EQFINEVV 382
E+QR + R +G+G FG V++G M P+ VA+K + + E+F+ E +
Sbjct: 6 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ Q +H HIVKL+G E V +++ E + G L +
Sbjct: 64 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---------------VRKFS 107
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG SR + +
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDS 164
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + + + PE ++T SDV+ FGV + E+L G KP
Sbjct: 165 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 125/303 (41%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVI 383
D + LG+G FG V K + VAVK + A +K + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + K++DFG +R + N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 618 DLE 620
DL+
Sbjct: 312 DLD 314
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 125/309 (40%), Gaps = 45/309 (14%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRA---IDKTQIEQFINEVVILSQIN 388
+D Y LG GG V+ L D VAVK RA D + +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 389 HRHIVKLLGCCLETEVPV-----LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
H IV + E E P +V EY+ TL +H
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH----------------TEGPM 113
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ V + A+ + H I HRD+K +NIL+ + KV DFG +R++ +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSG 170
Query: 504 THL--TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNL 561
+ T AV GT Y PE + +SDVYS G VL E+LTG+ P +
Sbjct: 171 NSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT----GDSPVS 226
Query: 562 VAY-------FISLAKENKLLEILDARVAK---EAREEDIEAVAELAMGCLRLNSKKRPT 611
VAY A+ L LDA V K + E + AE+ +R+++ + P
Sbjct: 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
Query: 612 MKQVSMDLE 620
+V D E
Sbjct: 287 APKVLTDAE 295
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 340 RFLGQGGFGTVYKGMLPD-----GSIVAVKRSRAIDKTQIEQ-FINEVVILSQINHRHIV 393
R LG+G FG V G +VAVK +A Q + E+ IL + H HI+
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 394 KLLGCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
K GCC + + LV EY+ G+L ++ H +
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----------------LLF 122
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQ 511
A ++ +AY+HS I HR++ + N+LLD+ K+ DFG +++VP +
Sbjct: 123 AQQICEGMAYLHSQHYI---HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 512 G--TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
G ++ PE + ++ SDV+SFGV L ELLT
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 342 LGQGGFGTVYKGML--PDGSIVAV-----KRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
LG G FG V +G P G V+V K ++ FI EV + ++HR++++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
L G L T +V E G+L + H R A +
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS---------------RYAVQ 129
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQG 512
VA + Y+ S I HRD+ + N+LL + K+ DFG R++P + H + +
Sbjct: 130 VAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 186
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F + PE ++ ++ SD + FGV L E+ T G++P
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 342 LGQGGFGTVYKGML--PDGSIVAV-----KRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
LG G FG V +G P G V+V K ++ FI EV + ++HR++++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
L G L T +V E G+L + H R A +
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS---------------RYAVQ 129
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQG 512
VA + Y+ S I HRD+ + N+LL + K+ DFG R++P + H + +
Sbjct: 130 VAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 186
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F + PE ++ ++ SD + FGV L E+ T G++P
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 124/303 (40%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVI 383
D + LG+G FG V K + VAVK + A +K + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + K++DFG +R + N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 618 DLE 620
DL+
Sbjct: 312 DLD 314
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 342 LGQGGFGTVYKGML--PDGSIVAV-----KRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
LG G FG V +G P G V+V K ++ FI EV + ++HR++++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
L G L T +V E G+L + H R A +
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS---------------RYAVQ 119
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQG 512
VA + Y+ S I HRD+ + N+LL + K+ DFG R++P + H + +
Sbjct: 120 VAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 176
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F + PE ++ ++ SD + FGV L E+ T G++P
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 342 LGQGGFGTVYKGML--PDGSIVAV-----KRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
LG G FG V +G P G V+V K ++ FI EV + ++HR++++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
L G L + +V E G+L + H R A +
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS---------------RYAVQ 123
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQG 512
VA + Y+ S I HRD+ + N+LL + K+ DFG R++P + H + +
Sbjct: 124 VAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F + PE ++ ++ SD + FGV L E+ T G++P
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 342 LGQGGFGTVYK----GMLPDG----SIVAVK--RSRAIDKTQIEQFINEVVILSQI-NHR 390
LG+G FG V G+ D + VAVK +S A +K + I+E+ ++ I H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 94
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+I+ LLG C + ++ EY S G L ++ + V
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN-DKTHLTTA 509
A +VA + Y+ S I HRD+ + N+L+ + K++DFG +R + + D TT
Sbjct: 155 CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISL 568
+ + PE YT +SDV+SFGV+L E+ T G P EE L
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LFKL 264
Query: 569 AKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSMDLE 620
KE R+ K + EL M C +RPT KQ+ DL+
Sbjct: 265 LKEGH-------RMDKPSN-----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 342 LGQGGFGTVYKGML--PDGSIVAV-----KRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
LG G FG V +G P G V+V K ++ FI EV + ++HR++++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
L G L + +V E G+L + H R A +
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS---------------RYAVQ 119
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQG 512
VA + Y+ S I HRD+ + N+LL + K+ DFG R++P + H + +
Sbjct: 120 VAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F + PE ++ ++ SD + FGV L E+ T G++P
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 125/309 (40%), Gaps = 45/309 (14%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAI---DKTQIEQFINEVVILSQIN 388
+D Y LG GG V+ L D VAVK RA D + +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 389 HRHIVKLLGCCLETEVPV-----LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
H IV + E E P +V EY+ TL +H
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH----------------TEGPM 113
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ V + A+ + H I HRD+K +NI++ + KV DFG +R++ +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 504 THLT--TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNL 561
+T AV GT Y PE + +SDVYS G VL E+LTG+ P +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT----GDSPVS 226
Query: 562 VAY-------FISLAKENKLLEILDARVAK---EAREEDIEAVAELAMGCLRLNSKKRPT 611
VAY A+ L LDA V K + E + AE+ +R+++ + P
Sbjct: 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
Query: 612 MKQVSMDLE 620
+V D E
Sbjct: 287 APKVLTDAE 295
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 342 LGQGGFGTVYKGML--PDGSIVAV-----KRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
LG G FG V +G P G V+V K ++ FI EV + ++HR++++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
L G L + +V E G+L + H R A +
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS---------------RYAVQ 119
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQG 512
VA + Y+ S I HRD+ + N+LL + K+ DFG R++P + H + +
Sbjct: 120 VAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F + PE ++ ++ SD + FGV L E+ T G++P
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 342 LGQGGFGTVYK----GMLPDG----SIVAVK--RSRAIDKTQIEQFINEVVILSQIN-HR 390
LG+G FG V G+ D + VAVK +S A +K + I+E+ ++ I H+
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 135
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+I+ LLG C + ++ EY S G L ++ + V
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN-DKTHLTTA 509
A +VA + Y+ S I HRD+ + N+L+ + K++DFG +R + + D TT
Sbjct: 196 CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISL 568
+ + PE YT +SDV+SFGV+L E+ T G P EE L
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LFKL 305
Query: 569 AKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSMDLE 620
KE R+ K + EL M C +RPT KQ+ DL+
Sbjct: 306 LKEGH-------RMDKPSN-----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 342 LGQGGFGTVYKGML--PDGSIVAV-----KRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
LG G FG V +G P G V+V K ++ FI EV + ++HR++++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
L G L + +V E G+L + H R A +
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS---------------RYAVQ 123
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQG 512
VA + Y+ S I HRD+ + N+LL + K+ DFG R++P + H + +
Sbjct: 124 VAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
F + PE ++ ++ SD + FGV L E+ T G++P
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 115/252 (45%), Gaps = 22/252 (8%)
Query: 300 FKQNGGYLLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGS 359
+K+ L Q+ C SS+ K + + + ++ + LG G FG V+ +
Sbjct: 154 YKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHT 213
Query: 360 IVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPV-LVYEYISNGTLS 418
VAVK + +E F+ E ++ + H +VKL T+ P+ ++ E+++ G+L
Sbjct: 214 KVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLL 270
Query: 419 HHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSS 478
+ + + ++A +A++ I HRD++++
Sbjct: 271 DFLKSDEGSKQPLPKL--------------IDFSAQIAEGMAFIEQRNYI---HRDLRAA 313
Query: 479 NILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGV 538
NIL+ K++DFG +R + +++ + + PE +T KSDV+SFG+
Sbjct: 314 NILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGI 373
Query: 539 VLLELLT-GKKP 549
+L+E++T G+ P
Sbjct: 374 LLMEIVTYGRIP 385
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 115/250 (46%), Gaps = 24/250 (9%)
Query: 334 DNYNQSRFLGQGGFGTVYK----GMLP--DGSIVAVKRSRAIDKTQIE-QFINEVVILSQ 386
+N R +G+G FG V++ G+LP ++VAVK + ++ F E ++++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
++ +IVKLLG C + L++EY++ G L+ +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 447 NRVRVAC--------EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
++C +VA +AY+ + HRD+ + N L+ + K++DFG SR+
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFV---HRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 499 VPNDKTHLTTAVQGT-FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREE 556
+ + + + PE ++YT +SDV+++GVVL E+ + G +P E
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 283
Query: 557 EERNLVAYFI 566
E V Y++
Sbjct: 284 E----VIYYV 289
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPDGSI--VAVKRSRAIDKTQI-EQFINEVV 382
E+QR + R +G+G FG V++G M P+ VA+K + + E+F+ E +
Sbjct: 386 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ Q +H HIVKL+G E V +++ E + G L +
Sbjct: 444 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---------------VRKFS 487
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG SR + +
Sbjct: 488 LDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPI 550
+ + + + PE ++T SDV+ FGV + E+L G KP
Sbjct: 545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 134/296 (45%), Gaps = 44/296 (14%)
Query: 340 RFLGQGGFGTVYKG--MLPDGS--IVAVKRSRA-IDKTQIEQFINEVVILSQINHRHIVK 394
+ +G G FG V G LP VA+K ++ + Q F++E I+ Q +H +++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
L G ++ +++ E++ NG+L + + +++
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV------------------IQLVGM 114
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQG 512
+ G A M A + HR + + NIL++ KVSDFG SR + +D + T+A+ G
Sbjct: 115 LRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 174
Query: 513 TFG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLA 569
+ PE Q ++T SDV+S+G+V+ E+++ G++P ++ N ++
Sbjct: 175 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN------AIE 228
Query: 570 KENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRS 625
++ +L +D A+ +L + C + + RP Q+ L+ + R+
Sbjct: 229 QDYRLPPPMDCP----------SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 274
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 340 RFLGQGGFGTVYKGMLP-----DGSIVAVKRSRAIDKTQIEQ-FINEVVILSQINHRHIV 393
R LG+G FG V G +VAVK + Q+ + E+ IL + H HIV
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 394 KLLGCCLET-EVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
K GCC + E V LV EY+ G+L ++ H +
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----------------LLF 116
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQ 511
A ++ +AY+H+ I HR + + N+LLD+ K+ DFG +++VP +
Sbjct: 117 AQQICEGMAYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 173
Query: 512 G--TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
G ++ PE + ++ SDV+SFGV L ELLT
Sbjct: 174 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 340 RFLGQGGFGTVYKGMLPD-----GSIVAVKRSRAIDKTQIEQ-FINEVVILSQINHRHIV 393
R LG+G FG V G +VAVK +A Q + E+ IL + H HI+
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 394 KLLGCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
K GCC + + LV EY+ G+L ++ H +
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----------------LLF 122
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQ 511
A ++ +AY+H+ I HR++ + N+LLD+ K+ DFG +++VP +
Sbjct: 123 AQQICEGMAYLHAQHYI---HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 512 G--TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
G ++ PE + ++ SDV+SFGV L ELLT
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 340 RFLGQGGFGTVYKGMLP-----DGSIVAVKRSRAIDKTQIEQ-FINEVVILSQINHRHIV 393
R LG+G FG V G +VAVK + Q+ + E+ IL + H HIV
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 394 KLLGCCLET-EVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
K GCC + E V LV EY+ G+L ++ H +
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----------------LLF 117
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQ 511
A ++ +AY+H+ I HR + + N+LLD+ K+ DFG +++VP +
Sbjct: 118 AQQICEGMAYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 174
Query: 512 G--TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
G ++ PE + ++ SDV+SFGV L ELLT
Sbjct: 175 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 26/218 (11%)
Query: 340 RFLGQGGFGTVYKGML--PDGS--IVAVKRSR-AIDKTQIEQFINEVVILSQINHRHIVK 394
R +G G FG V G L P VA+K + + Q F+ E I+ Q +H +I+
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
L G +++ ++V EY+ NG+L + + +++
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV------------------IQLVGM 129
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
+ G A M + + HRD+ + NIL++ KVSDFG SR + +D T G
Sbjct: 130 LRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 189
Query: 515 G--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ PE ++T SDV+S+G+V+ E+++ G++P
Sbjct: 190 PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 342 LGQGGFGTVYK----GMLPDG----SIVAVK--RSRAIDKTQIEQFINEVVILSQI-NHR 390
LG+G FG V G+ D + VAVK +S A +K + I+E+ ++ I H+
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 83
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+I+ LLG C + ++ EY S G L ++ + V
Sbjct: 84 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN-DKTHLTTA 509
A +VA + Y+ S I HRD+ + N+L+ + K++DFG +R + + D TT
Sbjct: 144 CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISL 568
+ + PE YT +SDV+SFGV+L E+ T G P EE L
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LFKL 253
Query: 569 AKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSMDLE 620
KE R+ K + EL M C +RPT KQ+ DL+
Sbjct: 254 LKEGH-------RMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYL--------------- 120
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 121 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 342 LGQGGFGTVYK----GMLPDG----SIVAVK--RSRAIDKTQIEQFINEVVILSQI-NHR 390
LG+G FG V G+ D + VAVK +S A +K + I+E+ ++ I H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 94
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+I+ LLG C + ++ EY S G L ++ + V
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN-DKTHLTTA 509
A +VA + Y+ S I HRD+ + N+L+ + K++DFG +R + + D TT
Sbjct: 155 CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISL 568
+ + PE YT +SDV+SFGV+L E+ T G P EE L
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LFKL 264
Query: 569 AKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSMDLE 620
KE R+ K + EL M C +RPT KQ+ DL+
Sbjct: 265 LKEGH-------RMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--------------- 123
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 124 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 180
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 181 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 342 LGQGGFGTVYK----GMLPDG----SIVAVK--RSRAIDKTQIEQFINEVVILSQI-NHR 390
LG+G FG V G+ D + VAVK +S A +K + I+E+ ++ I H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 94
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+I+ LLG C + ++ EY S G L ++ + V
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN-DKTHLTTA 509
A +VA + Y+ S I HRD+ + N+L+ + K++DFG +R + + D TT
Sbjct: 155 CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISL 568
+ + PE YT +SDV+SFGV+L E+ T G P EE L
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LFKL 264
Query: 569 AKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSMDLE 620
KE R+ K + EL M C +RPT KQ+ DL+
Sbjct: 265 LKEGH-------RMDKPSN-----CTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 342 LGQGGFGTVYK----GMLPDG----SIVAVK--RSRAIDKTQIEQFINEVVILSQI-NHR 390
LG+G FG V G+ D + VAVK +S A +K + I+E+ ++ I H+
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 87
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+I+ LLG C + ++ EY S G L ++ + V
Sbjct: 88 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN-DKTHLTTA 509
A +VA + Y+ S I HRD+ + N+L+ + K++DFG +R + + D TT
Sbjct: 148 CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISL 568
+ + PE YT +SDV+SFGV+L E+ T G P EE L
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LFKL 257
Query: 569 AKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSMDLE 620
KE R+ K + EL M C +RPT KQ+ DL+
Sbjct: 258 LKEGH-------RMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 300
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--------------- 120
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 121 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 342 LGQGGFGTVYK----GMLPDG----SIVAVK--RSRAIDKTQIEQFINEVVILSQI-NHR 390
LG+G FG V G+ D + VAVK +S A +K + I+E+ ++ I H+
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 86
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+I+ LLG C + ++ EY S G L ++ + V
Sbjct: 87 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN-DKTHLTTA 509
A +VA + Y+ S I HRD+ + N+L+ + K++DFG +R + + D TT
Sbjct: 147 CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISL 568
+ + PE YT +SDV+SFGV+L E+ T G P EE L
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LFKL 256
Query: 569 AKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSMDLE 620
KE R+ K + EL M C +RPT KQ+ DL+
Sbjct: 257 LKEGH-------RMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 124/303 (40%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVI 383
D + LG+G FG V K + VAVK + A +K + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + K++DFG +R + N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 618 DLE 620
DL+
Sbjct: 312 DLD 314
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 76 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--------------- 119
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--------------- 123
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 124 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 180
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 181 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--------------- 121
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 122 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 79 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--------------- 122
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 123 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 27/229 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKG--MLPD--GSIVAVKRSRAIDKTQI-EQFINEVV 382
E+QR + R +G+G FG V++G M P+ VA+K + + E+F+ E +
Sbjct: 386 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ Q +H HIVKL+G E V +++ E + G L +
Sbjct: 444 TMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQ---------------VRKFS 487
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ + A +++ A+AY+ S + HRDI + N+L+ K+ DFG SR + +
Sbjct: 488 LDLASLILYAYQLSTALAYLESKRFV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDS 544
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPI 550
+ + + + PE ++T SDV+ FGV + E+L G KP
Sbjct: 545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--------------- 121
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 122 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 119
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--------------- 121
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 122 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 108
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 109 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 165 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYL--------------- 119
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 107
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 108 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 342 LGQGGFGTVYK----GMLPDG----SIVAVK--RSRAIDKTQIEQFINEVVILSQI-NHR 390
LG+G FG V G+ D + VAVK +S A +K + I+E+ ++ I H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 94
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+I+ LLG C + ++ EY S G L ++ + V
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN-DKTHLTTA 509
A +VA + Y+ S I HRD+ + N+L+ + K++DFG +R + + D TT
Sbjct: 155 CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISL 568
+ + PE YT +SDV+SFGV+L E+ T G P EE L
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LFKL 264
Query: 569 AKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSMDLE 620
KE R+ K + EL M C +RPT KQ+ DL+
Sbjct: 265 LKEGH-------RMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 124/303 (40%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVI 383
D + LG+G FG V K + VAVK + A +K + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + K++DFG +R + N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 618 DLE 620
DL+
Sbjct: 312 DLD 314
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 86 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 129
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 130 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 186
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 187 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 107
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 108 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 124/303 (40%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVI 383
D + LG+G FG V K + VAVK + A +K + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + K++DFG +R + N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 618 DLE 620
DL+
Sbjct: 312 DLD 314
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE----------------PDIGMPEPDA 106
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 107 QRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 119
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 176
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 119
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 122/283 (43%), Gaps = 42/283 (14%)
Query: 325 TAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQI-----EQFI 378
T+ + Q NY + +G+G F V + G VAVK IDKTQ+ ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK---IIDKTQLNSSSLQKLF 61
Query: 379 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
EV I+ +NH +IVKL + LV EY S G + ++ H
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR- 120
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 121 ---------------QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS-- 160
Query: 499 VPNDKT--HLTTAVQGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKPICLT-- 553
N+ T + A G Y PE FQ +Y + DV+S GV+L L++G P
Sbjct: 161 --NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
Query: 554 REEEERNL-----VAYFISLAKENKLLEILDARVAKEAREEDI 591
+E ER L + +++S EN L + L +K E I
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 119/281 (42%), Gaps = 38/281 (13%)
Query: 325 TAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQI-----EQFI 378
T+ + Q NY + +G+G F V + G VAV R IDKTQ+ ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAV---RIIDKTQLNSSSLQKLF 61
Query: 379 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
EV I+ +NH +IVKL + LV EY S G + ++ H
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR- 120
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 121 ---------------QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 499 VPNDKTHLTTAVQGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKPICLT--RE 555
T G+ Y PE FQ +Y + DV+S GV+L L++G P +E
Sbjct: 163 FTFGNKLDTFC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 556 EEERNL-----VAYFISLAKENKLLEILDARVAKEAREEDI 591
ER L + +++S EN L + L +K E I
Sbjct: 221 LRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 121
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 122 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 124/303 (40%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVKRSRAIDKTQ--IEQFINEVVI 383
D + LG+G FG V K + VAVK + D T+ + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEEDLSDLVSEMEM 93
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + K++DFG +R + N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 618 DLE 620
DL+
Sbjct: 312 DLD 314
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 122
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 123 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 103/242 (42%), Gaps = 29/242 (11%)
Query: 328 ELQRATDN-YNQSRFLGQGGFGTVYKGML-PDGSIVAVKRSRAIDKTQIE---QFINEVV 382
E Q T N + Q R LG+GGFG V + G + A K+ + + +NE
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
IL ++N R +V L + LV ++ G L HI+
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH--------------MGQAG 282
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
V A E+ + +H I +RD+K NILLDD ++SD G + VP
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC-----LTREEE 557
+T GT GY PE ++ +YT D ++ G +L E++ G+ P + REE
Sbjct: 340 QT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
Query: 558 ER 559
ER
Sbjct: 398 ER 399
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 342 LGQGGFGTVYK----GMLPDG----SIVAVK--RSRAIDKTQIEQFINEVVILSQI-NHR 390
LG+G FG V G+ D + VAVK +S A +K + I+E+ ++ I H+
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 79
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+I+ LLG C + ++ EY S G L ++ + V
Sbjct: 80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN-DKTHLTTA 509
A +VA + Y+ S I HRD+ + N+L+ + K++DFG +R + + D TT
Sbjct: 140 CAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISL 568
+ + PE YT +SDV+SFGV+L E+ T G P EE L
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------LFKL 249
Query: 569 AKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSMDLE 620
KE R+ K + EL M C +RPT KQ+ DL+
Sbjct: 250 LKEGH-------RMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 122
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 123 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 340 RFLGQGGFGTVYKGM-LPDGS----IVAVKRSRAIDKTQI-EQFINEVVILSQINHRHIV 393
+ LG G FGTVYKG+ +PDG VA+K R + ++ ++E +++ + ++
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC 453
+LLG CL + V LV + + G L H+ ++ + +
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQ---------------DLLNWCM 126
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKT-HLTTAVQG 512
++A ++Y+ + + HRD+ + N+L+ K++DFG +R + D+T + +
Sbjct: 127 QIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV 183
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ E ++T +SDV+S+GV + EL+T G KP
Sbjct: 184 PIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 122
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 123 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 121
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 122 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 126
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 127 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 107
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 108 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 70 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 113
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 114 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 170
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 171 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 122/283 (43%), Gaps = 42/283 (14%)
Query: 325 TAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQI-----EQFI 378
T+ + Q NY + +G+G F V + G VAV R IDKTQ+ ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAV---RIIDKTQLNSSSLQKLF 61
Query: 379 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
EV I+ +NH +IVKL + LV EY S G + ++ H
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR- 120
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 121 ---------------QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS-- 160
Query: 499 VPNDKTHLTTAVQ--GTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKPICLT-- 553
N+ T + G+ Y PE FQ +Y + DV+S GV+L L++G P
Sbjct: 161 --NEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
Query: 554 REEEERNL-----VAYFISLAKENKLLEILDARVAKEAREEDI 591
+E ER L + +++S EN L + L +K E I
Sbjct: 219 KELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 126
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 127 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 183
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 82 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 125
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 126 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 183 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I + +N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINAMLN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE----------------PDIGMPEPDA 107
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 108 QRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 101 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 144
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 145 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 201
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 202 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 105/236 (44%), Gaps = 35/236 (14%)
Query: 323 IFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQI-----EQ 376
I +A + Q NY + +G+G F V + G VAVK IDKTQ+ ++
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVK---IIDKTQLNPTSLQK 60
Query: 377 FINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXX 436
EV I+ +NH +IVKL + LV EY S G + ++ H
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 120
Query: 437 XXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTS 496
++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 121 R----------------QIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFS 161
Query: 497 R--SVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKP 549
+V N L T G+ Y PE FQ +Y + DV+S GV+L L++G P
Sbjct: 162 NEFTVGN---KLDTFC-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 103/242 (42%), Gaps = 29/242 (11%)
Query: 328 ELQRATDN-YNQSRFLGQGGFGTVYKGML-PDGSIVAVKRSRAIDKTQIE---QFINEVV 382
E Q T N + Q R LG+GGFG V + G + A K+ + + +NE
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
IL ++N R +V L + LV ++ G L HI+
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH--------------MGQAG 282
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
V A E+ + +H I +RD+K NILLDD ++SD G + VP
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC-----LTREEE 557
+T GT GY PE ++ +YT D ++ G +L E++ G+ P + REE
Sbjct: 340 QT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
Query: 558 ER 559
ER
Sbjct: 398 ER 399
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 31/217 (14%)
Query: 340 RFLGQGGFGTVY------KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIV 393
R LG G FG V+ G ++ +K+ + Q+E +E ++LS + H I+
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRY--YAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFII 69
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC 453
++ G + + ++ +YI G L + A
Sbjct: 70 RMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF----------------YAA 113
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
EV A+ Y+HS I +RD+K NILLD K++DFG ++ VP+ +T + GT
Sbjct: 114 EVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGT 166
Query: 514 FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
Y PE + Y D +SFG+++ E+L G P
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 336 YNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSR-AIDKTQIEQFINEVVILSQINHRHIV 393
+ LG GGFG V + + D G VA+K+ R + E++ E+ I+ ++NH ++V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 394 KL------LGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
L ++P+L EY G L +++
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT---------- 126
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD---DKFSAKVSDFGTSRSVPNDKT 504
+ +++ A+ Y+H I HRD+K NI+L + K+ D G ++ + D+
Sbjct: 127 ---LLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQG 178
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
L T GT Y PE + +YT D +SFG + E +TG +P
Sbjct: 179 ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 29/225 (12%)
Query: 336 YNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSR-AIDKTQIEQFINEVVILSQINHRHIV 393
+ LG GGFG V + + D G VA+K+ R + E++ E+ I+ ++NH ++V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 394 KL------LGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
L ++P+L EY G L +++
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT---------- 125
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD---DKFSAKVSDFGTSRSVPNDKT 504
+ +++ A+ Y+H I HRD+K NI+L + K+ D G ++ + D+
Sbjct: 126 ---LLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQG 177
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
L T GT Y PE + +YT D +SFG + E +TG +P
Sbjct: 178 ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ G + + VAVK + ++ F+ E ++ + H +V+L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAY 461
E ++ E+++ G+L + + + ++A +AY
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL--------------IDFSAQIAEGMAY 124
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY 521
+ I HRD++++N+L+ + K++DFG +R + +++ + + PE
Sbjct: 125 IERKNYI---HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 181
Query: 522 FQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KS+V+SFG++L E++T GK P
Sbjct: 182 INFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 73 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 116
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 117 LNWCVQIAEGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 173
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 174 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 119/281 (42%), Gaps = 38/281 (13%)
Query: 325 TAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQI-----EQFI 378
T+ + Q NY + +G+G F V + G VAVK IDKTQ+ ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK---IIDKTQLNSSSLQKLF 61
Query: 379 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
EV I+ +NH +IVKL + LV EY S G + ++ H
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR- 120
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 121 ---------------QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 499 VPNDKTHLTTAVQGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKPICLT--RE 555
T G+ Y PE FQ +Y + DV+S GV+L L++G P +E
Sbjct: 163 FTFGNKLDTFC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 556 EEERNL-----VAYFISLAKENKLLEILDARVAKEAREEDI 591
ER L + +++S EN L + L +K E I
Sbjct: 221 LRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 119/281 (42%), Gaps = 38/281 (13%)
Query: 325 TAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQI-----EQFI 378
T+ + Q NY + +G+G F V + G VAVK IDKTQ+ ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK---IIDKTQLNSSSLQKLF 61
Query: 379 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
EV I+ +NH +IVKL + LV EY S G + ++ H
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR- 120
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 121 ---------------QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 499 VPNDKTHLTTAVQGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKPICLT--RE 555
T G+ Y PE FQ +Y + DV+S GV+L L++G P +E
Sbjct: 163 FTFGNKLDTFC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 556 EEERNL-----VAYFISLAKENKLLEILDARVAKEAREEDI 591
ER L + +++S EN L + L +K E I
Sbjct: 221 LRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 124/303 (40%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVI 383
D + LG+G FG V K + VAVK + A +K + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + +++DFG +R + N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 618 DLE 620
DL+
Sbjct: 312 DLD 314
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 124/303 (40%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVI 383
D + LG+G FG V K + VAVK + A +K + ++E+ +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 80
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 81 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + K++DFG +R + N
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 254
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 255 ----LFKLLKEGH-------RMDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVE 298
Query: 618 DLE 620
DL+
Sbjct: 299 DLD 301
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 340 RFLGQGGFGTVYKGML--PDGS--IVAVKRSRA--IDKTQIEQFINEVVILSQINHRHIV 393
+ +G G FG V G L P VA+K +A DK Q F++E I+ Q +H +I+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNII 78
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC 453
L G + + +++ EY+ NG+L + + +++
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV------------------IQLVG 120
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
+ G + M + + HRD+ + NIL++ KVSDFG SR + +D T G
Sbjct: 121 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 514 FG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ PE ++T SDV+S+G+V+ E+++ G++P
Sbjct: 181 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 108
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 109 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 124/303 (40%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVI 383
D + LG+G FG V K + VAVK + A +K + ++E+ +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 85
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 86 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + K++DFG +R + N
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 259
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 260 ----LFKLLKEGH-------RMDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVE 303
Query: 618 DLE 620
DL+
Sbjct: 304 DLD 306
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 124/309 (40%), Gaps = 45/309 (14%)
Query: 333 TDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQIN 388
+D Y LG GG V+ + D ++ ++ A D + +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 389 HRHIVKLLGCCLETEVPV-----LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
H IV + E E P +V EY+ TL +H
Sbjct: 71 HPAIVAVYATG-EAETPAGPLPYIVMEYVDGVTLRDIVH----------------TEGPM 113
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ V + A+ + H I HRD+K +NI++ + KV DFG +R++ +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 504 THLT--TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNL 561
+T AV GT Y PE + +SDVYS G VL E+LTG+ P +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT----GDSPVS 226
Query: 562 VAY-------FISLAKENKLLEILDARVAK---EAREEDIEAVAELAMGCLRLNSKKRPT 611
VAY A+ L LDA V K + E + AE+ +R+++ + P
Sbjct: 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
Query: 612 MKQVSMDLE 620
+V D E
Sbjct: 287 APKVLTDAE 295
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 25/242 (10%)
Query: 315 CGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRA 368
C + + + I +E+ R N R LG G FG VY+G + P VAVK
Sbjct: 28 CFAGKTSSISDLKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 85
Query: 369 IDKTQIE-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+ Q E F+ E +I+S++NH++IV+ +G L++ ++ E ++ G L + +
Sbjct: 86 VCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---- 141
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DD 484
+ + VA ++A Y+ I HRDI + N LL
Sbjct: 142 -----TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGP 193
Query: 485 KFSAKVSDFGTSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLEL 543
AK+ DFG +R + + + PE F +T K+D +SFGV+L E+
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 544 LT 545
+
Sbjct: 254 FS 255
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 124/303 (40%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVI 383
D + LG+G FG V K + VAVK + A +K + ++E+ +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 82
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 83 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + K++DFG +R + N
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 256
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 257 ----LFKLLKEGH-------RMDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVE 300
Query: 618 DLE 620
DL+
Sbjct: 301 DLD 303
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE----------------PDIGMPEPDA 106
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 107 QRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE----------------PDIGMPEPDA 107
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 108 QRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 49/243 (20%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
R ++ + LGQG FG V K D A+K+ R ++ ++ ++EV++L+ +NH
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNH 61
Query: 390 RHIVKLLGCCLETEVPV-------------LVYEYISNGTLSHHIHDHXXXXXXXXXXXX 436
+++V+ LE V + EY N TL IH
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW-- 119
Query: 437 XXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTS 496
R+ ++ A++Y+HS I HRD+K NI +D+ + K+ DFG +
Sbjct: 120 -------------RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA 163
Query: 497 RSV--------------PNDKTHLTTAVQGTFGYFDPEYFQ-SSQYTDKSDVYSFGVVLL 541
++V P +LT+A+ GT Y E + Y +K D+YS G++
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
Query: 542 ELL 544
E++
Sbjct: 223 EMI 225
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 61
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 106
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 107 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 162
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 108
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 109 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 108
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 109 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 107
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 108 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 108
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 109 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 107
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 108 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 107
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 108 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 340 RFLGQGGFGTVYKGML--PDGS--IVAVKRSRA--IDKTQIEQFINEVVILSQINHRHIV 393
+ +G G FG V G L P VA+K +A DK Q F++E I+ Q +H +I+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNII 72
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC 453
L G + + +++ EY+ NG+L + + +++
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV------------------IQLVG 114
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
+ G + M + + HRD+ + NIL++ KVSDFG SR + +D T G
Sbjct: 115 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 514 FG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ PE ++T SDV+S+G+V+ E+++ G++P
Sbjct: 175 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE----------------PDIGMPEPDA 106
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 107 QRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 12/228 (5%)
Query: 327 EELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGSI--VAVKRSRAIDKT-QIEQFIN 379
E+ + +N + LG G FG V + G+ + ++ VAVK ++ + E ++
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 380 EVVILSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
E+ I+S + H +IV LLG C +++ EY G L + +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
+ + + +VA +A++ S I HRD+ + N+LL + AK+ DFG +R
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 499 VPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+ ND ++ + + PE YT +SDV+S+G++L E+ +
Sbjct: 216 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE----------------PDIGMPEPDA 106
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 107 QRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 340 RFLGQGGFGTVYKGML--PDGS--IVAVKRSRA--IDKTQIEQFINEVVILSQINHRHIV 393
+ +G G FG V G L P VA+K +A DK Q F++E I+ Q +H +I+
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASIMGQFDHPNII 93
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC 453
L G + + +++ EY+ NG+L + + +++
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV------------------IQLVG 135
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
+ G + M + + HRD+ + NIL++ KVSDFG SR + +D T G
Sbjct: 136 MLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 195
Query: 514 FG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ PE ++T SDV+S+G+V+ E+++ G++P
Sbjct: 196 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 335 NYNQSRF---LGQGGFGTVYKGMLPDGSI---VAVKRSRA-IDKTQIEQFINEVVILSQI 387
++N +F +G+G FG V K + + A+KR + K F E+ +L ++
Sbjct: 13 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 72
Query: 388 NHR-HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
H +I+ LLG C L EY +G L +
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A +VA + Y+ I HRD+ + NIL+ + + AK++DFG SR
Sbjct: 133 QLLHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRGQ------- 182
Query: 507 TTAVQGTFG-----YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPIC 551
V+ T G + E S YT SDV+S+GV+L E+++ G P C
Sbjct: 183 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 233
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 25/242 (10%)
Query: 315 CGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRA 368
C + + + I +E+ R N R LG G FG VY+G + P VAVK
Sbjct: 30 CFAGKTSSISDLKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 87
Query: 369 IDKTQIE-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+ Q E F+ E +I+S+ NH++IV+ +G L++ ++ E ++ G L + +
Sbjct: 88 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---- 143
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DD 484
+ + VA ++A Y+ I HRDI + N LL
Sbjct: 144 -----TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGP 195
Query: 485 KFSAKVSDFGTSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLEL 543
AK+ DFG +R + + + PE F +T K+D +SFGV+L E+
Sbjct: 196 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
Query: 544 LT 545
+
Sbjct: 256 FS 257
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 335 NYNQSRF---LGQGGFGTVYKGMLPDGSI---VAVKRSRA-IDKTQIEQFINEVVILSQI 387
++N +F +G+G FG V K + + A+KR + K F E+ +L ++
Sbjct: 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 82
Query: 388 NHR-HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
H +I+ LLG C L EY +G L +
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A +VA + Y+ I HRD+ + NIL+ + + AK++DFG SR
Sbjct: 143 QLLHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRGQ------- 192
Query: 507 TTAVQGTFG-----YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPIC 551
V+ T G + E S YT SDV+S+GV+L E+++ G P C
Sbjct: 193 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 243
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 124/303 (40%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVI 383
D + LG+G FG V K + VAVK + A +K + ++E+ +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 139
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ EY S G L ++
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + K++DFG +R + N
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 313
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 314 ----LFKLLKEGH-------RMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
Query: 618 DLE 620
DL+
Sbjct: 358 DLD 360
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 25/242 (10%)
Query: 315 CGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRA 368
C + + + I +E+ R N R LG G FG VY+G + P VAVK
Sbjct: 28 CFAGKTSSISDLKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 85
Query: 369 IDKTQIE-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+ Q E F+ E +I+S+ NH++IV+ +G L++ ++ E ++ G L + +
Sbjct: 86 VYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---- 141
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DD 484
+ + VA ++A Y+ I HRDI + N LL
Sbjct: 142 -----TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGP 193
Query: 485 KFSAKVSDFGTSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLEL 543
AK+ DFG +R + + + PE F +T K+D +SFGV+L E+
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 544 LT 545
+
Sbjct: 254 FS 255
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 25/242 (10%)
Query: 315 CGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRA 368
C + + + I +E+ R N R LG G FG VY+G + P VAVK
Sbjct: 13 CFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 70
Query: 369 IDKTQIE-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+ Q E F+ E +I+S+ NH++IV+ +G L++ ++ E ++ G L + +
Sbjct: 71 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRE---- 126
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DD 484
+ + VA ++A Y+ I HRDI + N LL
Sbjct: 127 -----TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGP 178
Query: 485 KFSAKVSDFGTSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLEL 543
AK+ DFG +R + + + PE F +T K+D +SFGV+L E+
Sbjct: 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 544 LT 545
+
Sbjct: 239 FS 240
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 32/217 (14%)
Query: 342 LGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCL 400
LG+G FG K + G ++ +K D+ F+ EV ++ + H +++K +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 401 ETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
+ + + EYI GTL I RV A ++A +A
Sbjct: 78 KDKRLNFITEYIKGGTLRGII---------------KSMDSQYPWSQRVSFAKDIASGMA 122
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT------------ 508
Y+HS + I HRD+ S N L+ + + V+DFG +R + ++KT
Sbjct: 123 YLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 509 -AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELL 544
V G + PE Y +K DV+SFG+VL E++
Sbjct: 180 YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 25/242 (10%)
Query: 315 CGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRA 368
C + + + I +E+ R N R LG G FG VY+G + P VAVK
Sbjct: 5 CFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 62
Query: 369 IDKTQIE-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+ Q E F+ E +I+S+ NH++IV+ +G L++ ++ E ++ G L + +
Sbjct: 63 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---- 118
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DD 484
+ + VA ++A Y+ I HRDI + N LL
Sbjct: 119 -----TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGP 170
Query: 485 KFSAKVSDFGTSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLEL 543
AK+ DFG +R + + + PE F +T K+D +SFGV+L E+
Sbjct: 171 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
Query: 544 LT 545
+
Sbjct: 231 FS 232
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 25/242 (10%)
Query: 315 CGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRA 368
C + + + I +E+ R N R LG G FG VY+G + P VAVK
Sbjct: 28 CFAGKTSSISDLKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 85
Query: 369 IDKTQIE-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+ Q E F+ E +I+S+ NH++IV+ +G L++ ++ E ++ G L + +
Sbjct: 86 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRE---- 141
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DD 484
+ + VA ++A Y+ I HRDI + N LL
Sbjct: 142 -----TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGP 193
Query: 485 KFSAKVSDFGTSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLEL 543
AK+ DFG +R + + + PE F +T K+D +SFGV+L E+
Sbjct: 194 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 544 LT 545
+
Sbjct: 254 FS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 25/242 (10%)
Query: 315 CGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRA 368
C + + + I +E+ R N R LG G FG VY+G + P VAVK
Sbjct: 13 CFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 70
Query: 369 IDKTQIE-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+ Q E F+ E +I+S+ NH++IV+ +G L++ ++ E ++ G L + +
Sbjct: 71 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---- 126
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DD 484
+ + VA ++A Y+ I HRDI + N LL
Sbjct: 127 -----TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGP 178
Query: 485 KFSAKVSDFGTSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLEL 543
AK+ DFG +R + + + PE F +T K+D +SFGV+L E+
Sbjct: 179 GRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 544 LT 545
+
Sbjct: 239 FS 240
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 115/271 (42%), Gaps = 38/271 (14%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQI-----EQFINEVVILSQIN 388
NY + +G+G F V + G VAVK IDKTQ+ ++ EV I+ +N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVK---IIDKTQLNSSSLQKLFREVRIMKVLN 64
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKL + LV EY S G + ++ H
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR----------- 113
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
++ AV Y H I HRD+K+ N+LLD + K++DFG S T
Sbjct: 114 -----QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 165
Query: 509 AVQGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKPI--CLTREEEERNL---- 561
G+ Y PE FQ +Y + DV+S GV+L L++G P +E ER L
Sbjct: 166 C--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 562 -VAYFISLAKENKLLEILDARVAKEAREEDI 591
+ +++S EN L + L +K E I
Sbjct: 224 RIPFYMSTDCENLLKKFLILNPSKRGTLEQI 254
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRS-----RAIDKTQIEQFINEVVILSQIN 388
+ + + LG G FGTVYKG+ +P+G V + + A ++ ++E +++ ++
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 110 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 153
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 154 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 211 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%)
Query: 342 LGQGGFGTVYKGML----PDGSIVAVKRSRAIDKTQ---IEQFINEVVILSQINHRHIVK 394
LG+ FG VYKG L P AV DK + E+F +E ++ +++ H ++V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
LLG + + +++ Y S+G L + + V + +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTTAVQGT 513
+A + Y+ S + H+D+ + N+L+ DK + K+SD G R V D L
Sbjct: 154 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 514 FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPIC 551
+ PE +++ SD++S+GVVL E+ + G +P C
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 249
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 33/215 (15%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAID----KTQIEQFINEVVILSQINHRHIVKLLG 397
+G+G FG V+KG+ D V + ID + +IE E+ +LSQ + ++ K G
Sbjct: 31 IGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 398 CCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC---E 454
L+ ++ EY+ G+ + + ++A E
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLR--------------------AGPFDEFQIATMLKE 128
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
+ + Y+HS I HRDIK++N+LL ++ K++DFG + + + + T V GT
Sbjct: 129 ILKGLDYLHSEKKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTP 184
Query: 515 GYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ PE Q S Y K+D++S G+ +EL G+ P
Sbjct: 185 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 124/309 (40%), Gaps = 45/309 (14%)
Query: 333 TDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQIN 388
+D Y LG GG V+ + D ++ ++ A D + +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 389 HRHIVKLLGCCLETEVPV-----LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
H IV + E E P +V EY+ TL +H
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH----------------TEGPM 113
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ V + A+ + H I HRD+K +NI++ + KV DFG +R++ +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 504 THLT--TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNL 561
+T AV GT Y PE + +SDVYS G VL E+LTG+ P +
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT----GDSPVS 226
Query: 562 VAY-------FISLAKENKLLEILDARVAK---EAREEDIEAVAELAMGCLRLNSKKRPT 611
VAY A+ L LDA V K + E + AE+ +R+++ + P
Sbjct: 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
Query: 612 MKQVSMDLE 620
+V D E
Sbjct: 287 APKVLTDAE 295
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 107
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 108 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G +G V + VAVK RA+D E E+ I +N
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 108
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 109 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 25/242 (10%)
Query: 315 CGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRA 368
C + + + I +E+ R N R LG G FG VY+G + P VAVK
Sbjct: 31 CFAGKTSSISDLKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 88
Query: 369 IDKTQIE-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+ Q E F+ E +I+S+ NH++IV+ +G L++ ++ E ++ G L + +
Sbjct: 89 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---- 144
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DD 484
+ + VA ++A Y+ I HRDI + N LL
Sbjct: 145 -----TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGP 196
Query: 485 KFSAKVSDFGTSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLEL 543
AK+ DFG +R + + + PE F +T K+D +SFGV+L E+
Sbjct: 197 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
Query: 544 LT 545
+
Sbjct: 257 FS 258
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 134/320 (41%), Gaps = 49/320 (15%)
Query: 326 AEELQRATDNYNQSR-------FLGQGGFGTVYKGMLP--DGSI--VAVKRSRAIDKTQ- 373
+EELQ ++ R LG+G FG+V +G L DG+ VAVK + + +Q
Sbjct: 19 SEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR 78
Query: 374 -IEQFINEVVILSQINHRHIVKLLGCCLETEV-----PVLVYEYISNGTLSHHIHDHXXX 427
IE+F++E + +H ++++LLG C+E P+++ ++ G L ++
Sbjct: 79 EIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL------ 132
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS 487
++ ++A + Y+ + HRD+ + N +L D +
Sbjct: 133 ----LYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMT 185
Query: 488 AKVSDFGTSRSV-PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT- 545
V+DFG S+ + D + + E YT KSDV++FGV + E+ T
Sbjct: 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 245
Query: 546 GKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLN 605
G P + E + + + L + E+ ++ + E+ C R +
Sbjct: 246 GMTPYPGVQNHEMYDYLLHGHRLKQP----------------EDCLDELYEIMYSCWRTD 289
Query: 606 SKKRPTMKQVSMDLEGLRRS 625
RPT + + LE L S
Sbjct: 290 PLDRPTFSVLRLQLEKLLES 309
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 25/242 (10%)
Query: 315 CGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRA 368
C + + + I +E+ R N R LG G FG VY+G + P VAVK
Sbjct: 54 CFAGKTSSISDLKEVPRK--NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 111
Query: 369 IDKTQIE-QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+ Q E F+ E +I+S+ NH++IV+ +G L++ ++ E ++ G L + +
Sbjct: 112 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---- 167
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DD 484
+ + VA ++A Y+ I HRDI + N LL
Sbjct: 168 -----TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGP 219
Query: 485 KFSAKVSDFGTSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLEL 543
AK+ DFG +R + + + PE F +T K+D +SFGV+L E+
Sbjct: 220 GRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
Query: 544 LT 545
+
Sbjct: 280 FS 281
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 12/219 (5%)
Query: 342 LGQGGFGTVYKGML----PDGSIVAVKRSRAIDKTQ---IEQFINEVVILSQINHRHIVK 394
LG+ FG VYKG L P AV DK + E+F +E ++ +++ H ++V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
LLG + + +++ Y S+G L + + V + +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTTAVQGT 513
+A + Y+ S + H+D+ + N+L+ DK + K+SD G R V D L
Sbjct: 137 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 514 FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPIC 551
+ PE +++ SD++S+GVVL E+ + G +P C
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 232
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 99/233 (42%), Gaps = 29/233 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVK---RSRAIDKTQIEQFINEVVILSQI 387
DN+ R LG+G FG V + + G + AVK + + +E + E ILS
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 388 NHRHIVKLLGCCLET-EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ + L CC +T + V E+++ G L HI
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-----------------KSRRFDE 123
Query: 447 NRVRV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR-SVPNDKT 504
R R A E+ A+ ++H I +RD+K N+LLD + K++DFG + + N T
Sbjct: 124 ARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT 180
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEE 557
T GT Y PE Q Y D ++ GV+L E+L G P E++
Sbjct: 181 --TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD 231
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 123/303 (40%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVI 383
D + LG+G FG V K + VAVK + A +K + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ Y S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + K++DFG +R + N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 618 DLE 620
DL+
Sbjct: 312 DLD 314
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G++VAVK+ + Q F E+ IL ++ IVK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 397 GCCLETEVP--VLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G P LV EY+ +G L + H + + +
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRL---------------LLYSSQ 119
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQG 512
+ + Y+ S + HRD+ + NIL++ + K++DFG ++ +P DK + Q
Sbjct: 120 ICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS 176
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
++ PE + ++ +SDV+SFGVVL EL T
Sbjct: 177 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + L G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 83 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--------------- 126
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 127 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQI-----EQFINEVVILSQIN 388
NY + +G+G F V + G VA+K IDKTQ+ ++ EV I+ +N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIK---IIDKTQLNPTSLQKLFREVRIMKILN 72
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKL + L+ EY S G + ++ H ++
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR-------------SK 119
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
R ++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 120 FR---QIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LD 171
Query: 509 AVQGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKP 549
A G Y PE FQ +Y + DV+S GV+L L++G P
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 123/303 (40%), Gaps = 39/303 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY--------KGMLPDGSIVAVK--RSRAIDKTQIEQFINEVVI 383
D + LG+G FG V K + VAVK + A +K + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 384 LSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+ I H++I+ LLG C + ++ Y S G L ++
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN- 501
+ V ++A + Y+ S I HRD+ + N+L+ + K++DFG +R + N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERN 560
D TT + + PE YT +SDV+SFGV++ E+ T G P EE
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAM---GCLRLNSKKRPTMKQVSM 617
L KE R+ K A EL M C +RPT KQ+
Sbjct: 268 ----LFKLLKEGH-------RMDKPAN-----CTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 618 DLE 620
DL+
Sbjct: 312 DLD 314
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + L G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 119
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 120 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 27/223 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGS----IVAVKRSR-AIDKTQIEQFINEVVILSQIN 388
+ + + L G FGTVYKG+ +P+G VA+K R A ++ ++E +++ ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ H+ +LLG CL + V L+ + + G L ++ +H
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--------------- 126
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLT 507
+ ++A + Y+ + HRD+ + N+L+ K++DFG ++ + +K +
Sbjct: 127 LNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ + E YT +SDV+S+GV + EL+T G KP
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 52/289 (17%)
Query: 342 LGQGGFGTVYKGMLPD--GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCC 399
+G+G FG V ML D G+ VAVK + + + F+ E +++Q+ H ++V+LLG
Sbjct: 201 IGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 400 LETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGA 458
+E + + +V EY++ G+L ++ ++ + +V A
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--------------LKFSLDVCEA 301
Query: 459 VAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFD 518
+ Y+ + HRD+ + N+L+ + AKVSDFG ++ + + V+ T
Sbjct: 302 MEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----A 354
Query: 519 PEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEIL 578
PE + +++ KSDV+SFG++L E+ + F + L+ +
Sbjct: 355 PEALREKKFSTKSDVWSFGILLWEIYS-------------------FGRVPYPRIPLKDV 395
Query: 579 DARVAK----EAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
RV K +A + AV ++ C L++ RPT Q+ LE +R
Sbjct: 396 VPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 23/222 (10%)
Query: 335 NYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRAIDKTQIE-QFINEVVILSQI 387
N R LG G FG VY+G + P VAVK + Q E F+ E +I+S++
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 91
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
NH++IV+ +G L++ ++ E ++ G L + + +
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---------TRPRPSQPSSLAMLD 142
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKT 504
+ VA ++A Y+ I HRDI + N LL AK+ DFG +R +
Sbjct: 143 LLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 505 HLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+ + PE F +T K+D +SFGV+L E+ +
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
LG G FG V+ + VAVK + +E F+ E ++ + H +VKL
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV-- 79
Query: 402 TEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
T+ P+ ++ E+++ G+L + + + ++A +A
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL--------------IDFSAQIAEGMA 125
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
++ I HRD++++NIL+ K++DFG +R + +++ + + PE
Sbjct: 126 FIEQRNYI---HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE 182
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+T KSDV+SFG++L+E++T G+ P
Sbjct: 183 AINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 103/235 (43%), Gaps = 35/235 (14%)
Query: 325 TAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQI-----EQFI 378
T+ + Q NY + +G+G F V + G VAVK IDKTQ+ ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK---IIDKTQLNSSSLQKLF 61
Query: 379 NEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
EV I +NH +IVKL + LV EY S G + ++ H
Sbjct: 62 REVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR- 120
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
++ AV Y H I HRD+K+ N+LLD + K++DFG S
Sbjct: 121 ---------------QIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFS-- 160
Query: 499 VPNDKT--HLTTAVQGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKPI 550
N+ T + A G Y PE FQ +Y + DV+S GV+L L++G P
Sbjct: 161 --NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQIN 388
++++ + LG+G G V + VAVK RA+D E E+ I +N
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H ++VK G E + L EY S G L I
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------------- 107
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP-NDKTHLT 507
R ++ V Y+H I I HRDIK N+LLD++ + K+SDFG + N++ L
Sbjct: 108 -RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 508 TAVQGTFGYFDPEYFQSSQY-TDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + ++ + DV+S G+VL +L G+ P
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 335 NYNQSRF---LGQGGFGTVYKGMLPDGSI---VAVKRSRA-IDKTQIEQFINEVVILSQI 387
++N +F +G+G FG V K + + A+KR + K F E+ +L ++
Sbjct: 20 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 79
Query: 388 NHR-HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
H +I+ LLG C L EY +G L +
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A +VA + Y+ I HR++ + NIL+ + + AK++DFG SR
Sbjct: 140 QLLHFAADVARGMDYLSQKQFI---HRNLAARNILVGENYVAKIADFGLSRGQ------- 189
Query: 507 TTAVQGTFG-----YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPIC 551
V+ T G + E S YT SDV+S+GV+L E+++ G P C
Sbjct: 190 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 240
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQI-----EQFINEVVILSQIN 388
NY + +G+G F V + G VA+K IDKTQ+ ++ EV I+ +N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIK---IIDKTQLNPTSLQKLFREVRIMKILN 69
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKL + L+ EY S G + ++ H ++
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR-------------SK 116
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
R ++ AV Y H I HRD+K+ N+LLD + K++DFG S T
Sbjct: 117 FR---QIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF 170
Query: 509 AVQGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKP 549
G+ Y PE FQ +Y + DV+S GV+L L++G P
Sbjct: 171 C--GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 340 RFLGQGGFGTVYKGML------PDGSIVAVKRSRAIDKTQIE-QFINEVVILSQINHRHI 392
R LG G FG VY+G + P VAVK + Q E F+ E +I+S+ NH++I
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V+ +G L++ ++ E ++ G L + + + + VA
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRE---------TRPRPSQPSSLAMLDLLHVA 173
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKTHLTTA 509
++A Y+ I HRDI + N LL AK+ DFG +R + +
Sbjct: 174 RDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 230
Query: 510 -VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+ PE F +T K+D +SFGV+L E+ +
Sbjct: 231 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 14/228 (6%)
Query: 327 EELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGSI--VAVKRSRAIDKT-QIEQFIN 379
E+ + +N + LG G FG V + G+ + ++ VAVK ++ + E ++
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 380 EVVILSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
E+ I+S + H +IV LLG C +++ EY G L + +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR--RKSRVLETDPAFAI 156
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
+ + + +VA +A++ S I HRD+ + N+LL + AK+ DFG +R
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 499 VPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+ ND ++ + + PE YT +SDV+S+G++L E+ +
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 14/228 (6%)
Query: 327 EELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGSI--VAVKRSRAIDKT-QIEQFIN 379
E+ + +N + LG G FG V + G+ + ++ VAVK ++ + E ++
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 380 EVVILSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
E+ I+S + H +IV LLG C +++ EY G L + +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR--RKSRVLETDPAFAI 156
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
+ + + +VA +A++ S I HRD+ + N+LL + AK+ DFG +R
Sbjct: 157 ANSTLSTRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 499 VPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+ ND ++ + + PE YT +SDV+S+G++L E+ +
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 23/222 (10%)
Query: 335 NYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRAIDKTQIE-QFINEVVILSQI 387
N R LG G FG VY+G + P VAVK + Q E F+ E +I+S+
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
NH++IV+ +G L++ ++ E ++ G L + + +
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---------TRPRPSQPSSLAMLD 142
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKT 504
+ VA ++A Y+ I HRDI + N LL AK+ DFG +R +
Sbjct: 143 LLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 505 HLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+ + PE F +T K+D +SFGV+L E+ +
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 23/222 (10%)
Query: 335 NYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRAIDKTQIE-QFINEVVILSQI 387
N R LG G FG VY+G + P VAVK + Q E F+ E +I+S+
Sbjct: 38 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 97
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
NH++IV+ +G L++ ++ E ++ G L + + +
Sbjct: 98 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---------TRPRPSQPSSLAMLD 148
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKT 504
+ VA ++A Y+ I HRDI + N LL AK+ DFG +R +
Sbjct: 149 LLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 205
Query: 505 HLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+ + PE F +T K+D +SFGV+L E+ +
Sbjct: 206 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAID----KTQIEQFINEVVILSQINHRHIVKLLG 397
+G+G FG V+KG+ D V + ID + +IE E+ +LSQ + ++ K G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 398 CCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC---E 454
L+ ++ EY+ G+ + ++A E
Sbjct: 73 SYLKDTKLWIIMEYLGGGS--------------------ALDLLEPGPLDETQIATILRE 112
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
+ + Y+HS I HRDIK++N+LL + K++DFG + + + + T V GT
Sbjct: 113 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTP 168
Query: 515 GYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ PE + S Y K+D++S G+ +EL G+ P
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 95/228 (41%), Gaps = 31/228 (13%)
Query: 333 TDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQIN 388
+D Y LG GG V+ + D ++ ++ A D + +F E + +N
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 389 HRHIVKLLGCCLETEVPV-----LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
H IV + E E P +V EY+ TL +H
Sbjct: 88 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH----------------TEGPM 130
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ V + A+ + H I HRD+K +NI++ + KV DFG +R++ +
Sbjct: 131 TPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSG 187
Query: 504 THLT--TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+T AV GT Y PE + +SDVYS G VL E+LTG+ P
Sbjct: 188 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 342 LGQGGFGTVYKGMLP----DGSIVAVKRSRA-IDKTQIEQFINEVVILSQINHRHIVKLL 396
+G G FG V +G L S VA+K + + Q +F++E I+ Q H +I++L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
G + +++ E++ NG L + + +++ +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV------------------IQLVGMLR 123
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV---PNDKTHLTTAVQGT 513
G + M A + HRD+ + NIL++ KVSDFG SR + +D T+ T+++ G
Sbjct: 124 GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY-TSSLGGK 182
Query: 514 FG--YFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ PE ++T SD +S+G+V+ E+++ G++P
Sbjct: 183 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFI----NEVVILSQINHRHIVKLLG 397
+G+G FG V+KG+ D V + ID + E I E+ +LSQ + ++ K G
Sbjct: 35 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 398 CCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC---E 454
L+ ++ EY+ G+ + ++A E
Sbjct: 93 SYLKDTKLWIIMEYLGGGS--------------------ALDLLEPGPLDETQIATILRE 132
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
+ + Y+HS I HRDIK++N+LL + K++DFG + + + + T V GT
Sbjct: 133 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTP 188
Query: 515 GYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ PE + S Y K+D++S G+ +EL G+ P
Sbjct: 189 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 28/239 (11%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D++ R +G+G FG V D + A+K + + +++ ++ E+ I+ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+V L + E +V + + G L +H+ +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL--------------- 119
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
CE+ A+ Y+ + I HRD+K NILLD+ ++DF + +P + T +TT
Sbjct: 120 -FICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITT- 173
Query: 510 VQGTFGYFDPEYFQSSQ---YTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYF 565
+ GT Y PE F S + Y+ D +S GV ELL G++P + + +V F
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 18/228 (7%)
Query: 327 EELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGSI--VAVKRSRAIDKT-QIEQFIN 379
E+ + +N + LG G FG V + G+ + ++ VAVK ++ + E ++
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 90
Query: 380 EVVILSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
E+ I+S + H +IV LLG C +++ EY G L + +
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR------RKAEADLDKE 144
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
+ + + +VA +A++ S I HRD+ + N+LL + AK+ DFG +R
Sbjct: 145 DGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARD 201
Query: 499 VPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+ ND ++ + + PE YT +SDV+S+G++L E+ +
Sbjct: 202 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 125/291 (42%), Gaps = 30/291 (10%)
Query: 342 LGQGGFG-----TVYKGMLPDGSI-VAVKRSR-AIDKTQIEQFINEVVILSQI-NHRHIV 393
LG G FG T Y + D ++ VAVK + + T+ E ++E+ +LS + NH +IV
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXX--XXXXXXXXXXXXXXXXXXNRVRV 451
LLG C +++ EY G L + + + +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA-V 510
+ +VA +A++ S I HRD+ + NILL K+ DFG +R + ND ++
Sbjct: 174 SYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 511 QGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLA 569
+ + PE + YT +SDV+S+G+ L EL + G P + +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP---------------YPGMP 275
Query: 570 KENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
++K +++ + E + ++ C + KRPT KQ+ +E
Sbjct: 276 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 125/291 (42%), Gaps = 30/291 (10%)
Query: 342 LGQGGFG-----TVYKGMLPDGSI-VAVKRSR-AIDKTQIEQFINEVVILSQI-NHRHIV 393
LG G FG T Y + D ++ VAVK + + T+ E ++E+ +LS + NH +IV
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXX--XXXXXXXXXXXXXXXXXXNRVRV 451
LLG C +++ EY G L + + + +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA-V 510
+ +VA +A++ S I HRD+ + NILL K+ DFG +R + ND ++
Sbjct: 151 SYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 511 QGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLA 569
+ + PE + YT +SDV+S+G+ L EL + G P + +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP---------------YPGMP 252
Query: 570 KENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
++K +++ + E + ++ C + KRPT KQ+ +E
Sbjct: 253 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 19/235 (8%)
Query: 327 EELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGSI--VAVKRSRAIDKT-QIEQFIN 379
E+ + +N + LG G FG V + G+ + ++ VAVK ++ + E ++
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 380 EVVILSQIN-HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
E+ I+S + H +IV LLG C +++ EY G L + +
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 439 XXXXXXXXNR-------VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVS 491
R + + +VA +A++ S I HRD+ + N+LL + AK+
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIG 200
Query: 492 DFGTSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
DFG +R + ND ++ + + PE YT +SDV+S+G++L E+ +
Sbjct: 201 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 32/220 (14%)
Query: 342 LGQGGFGTVYKGMLP----DGSIVAVKRSRA-IDKTQIEQFINEVVILSQINHRHIVKLL 396
+G G FG V +G L S VA+K + + Q +F++E I+ Q H +I++L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
G + +++ E++ NG L + + +++ +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV------------------IQLVGMLR 125
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR------SVPNDKTHLTTAV 510
G + M A + HRD+ + NIL++ KVSDFG SR S P + + L +
Sbjct: 126 GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
Query: 511 QGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
+ PE ++T SD +S+G+V+ E+++ G++P
Sbjct: 186 --PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 18/228 (7%)
Query: 327 EELQRATDNYNQSRFLGQGGFGTVYK----GMLPDGSI--VAVKRSRAIDKT-QIEQFIN 379
E+ + +N + LG G FG V + G+ + ++ VAVK ++ + E ++
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 380 EVVILSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
E+ I+S + H +IV LLG C +++ EY G L + +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR------RKAEADLDKE 152
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
+ + + +VA +A++ S I HRD+ + N+LL + AK+ DFG +R
Sbjct: 153 DGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARD 209
Query: 499 VPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+ ND ++ + + PE YT +SDV+S+G++L E+ +
Sbjct: 210 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 125/291 (42%), Gaps = 30/291 (10%)
Query: 342 LGQGGFG-----TVYKGMLPDGSI-VAVKRSR-AIDKTQIEQFINEVVILSQI-NHRHIV 393
LG G FG T Y + D ++ VAVK + + T+ E ++E+ +LS + NH +IV
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXX--XXXXXXXXXXXXXXXXXXNRVRV 451
LLG C +++ EY G L + + + +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA-V 510
+ +VA +A++ S I HRD+ + NILL K+ DFG +R + ND ++
Sbjct: 169 SYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 511 QGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLA 569
+ + PE + YT +SDV+S+G+ L EL + G P + +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP---------------YPGMP 270
Query: 570 KENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
++K +++ + E + ++ C + KRPT KQ+ +E
Sbjct: 271 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 18/246 (7%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D N + LG+G FG V + A R+ A+ ++
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----SKRNEFVP 132
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKIXDFG 189
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D ++ + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
Query: 553 TREEEE 558
+ +EE
Sbjct: 250 VKIDEE 255
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 125/291 (42%), Gaps = 30/291 (10%)
Query: 342 LGQGGFG-----TVYKGMLPDGSI-VAVKRSR-AIDKTQIEQFINEVVILSQI-NHRHIV 393
LG G FG T Y + D ++ VAVK + + T+ E ++E+ +LS + NH +IV
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXX--XXXXXXXXXXXXXXXXXXNRVRV 451
LLG C +++ EY G L + + + +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA-V 510
+ +VA +A++ S I HRD+ + NILL K+ DFG +R + ND ++
Sbjct: 174 SYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 511 QGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLA 569
+ + PE + YT +SDV+S+G+ L EL + G P + +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP---------------YPGMP 275
Query: 570 KENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
++K +++ + E + ++ C + KRPT KQ+ +E
Sbjct: 276 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 47/268 (17%)
Query: 358 GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTL 417
G VAVK+ + + E NEVVI+ +H ++V + L + +V E++ G L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 418 SHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKS 477
+ I H V V A++Y+H+ + HRDIKS
Sbjct: 130 T-DIVTHTRMNEEQIAT----------------VCLSVLRALSYLHNQG---VIHRDIKS 169
Query: 478 SNILLDDKFSAKVSDFG----TSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDV 533
+ILL K+SDFG S+ VP K + GT + PE Y + D+
Sbjct: 170 DSILLTSDGRIKLSDFGFCAQVSKEVPKRK-----XLVGTPYWMAPEVISRLPYGTEVDI 224
Query: 534 YSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEA 593
+S G++++E++ G+ P YF E L + R + R +D+
Sbjct: 225 WSLGIMVIEMIDGEPP--------------YF----NEPPLQAMRRIRDSLPPRVKDLHK 266
Query: 594 VAELAMGCLRLNSKKRPTMKQVSMDLEG 621
V+ + G L L + P+ + + +L G
Sbjct: 267 VSSVLRGFLDLMLVREPSQRATAQELLG 294
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G++VAVK+ + Q F E+ IL ++ IVK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G + LV EY+ +G L + H + + +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL---------------LLYSSQ 123
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQG 512
+ + Y+ S + HRD+ + NIL++ + K++DFG ++ +P DK + + Q
Sbjct: 124 ICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 180
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
++ PE + ++ +SDV+SFGVVL EL T
Sbjct: 181 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G++VAVK+ + Q F E+ IL ++ IVK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G + LV EY+ +G L + H + + +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL---------------LLYSSQ 135
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQG 512
+ + Y+ S + HRD+ + NIL++ + K++DFG ++ +P DK + + Q
Sbjct: 136 ICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 192
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
++ PE + ++ +SDV+SFGVVL EL T
Sbjct: 193 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 31/197 (15%)
Query: 358 GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTL 417
G VAVK + + E NEVVI+ H ++V++ L E ++ E++ G L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 418 SHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE-VAGAVAYMHSAASIPIFHRDIK 476
+ + ++ CE V A+AY+H+ + HRDIK
Sbjct: 130 TDIV------------------SQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIK 168
Query: 477 SSNILLDDKFSAKVSDFG----TSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSD 532
S +ILL K+SDFG S+ VP K + GT + PE S Y + D
Sbjct: 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKX-----LVGTPYWMAPEVISRSLYATEVD 223
Query: 533 VYSFGVVLLELLTGKKP 549
++S G++++E++ G+ P
Sbjct: 224 IWSLGIMVIEMVDGEPP 240
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 125/291 (42%), Gaps = 30/291 (10%)
Query: 342 LGQGGFG-----TVYKGMLPDGSI-VAVKRSR-AIDKTQIEQFINEVVILSQI-NHRHIV 393
LG G FG T Y + D ++ VAVK + + T+ E ++E+ +LS + NH +IV
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXX--XXXXXXXXXXXXXXXXXXNRVRV 451
LLG C +++ EY G L + + + +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA-V 510
+ +VA +A++ S I HRD+ + NILL K+ DFG +R + ND ++
Sbjct: 167 SYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 511 QGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLA 569
+ + PE + YT +SDV+S+G+ L EL + G P + +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP---------------YPGMP 268
Query: 570 KENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
++K +++ + E + ++ C + KRPT KQ+ +E
Sbjct: 269 VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 30/212 (14%)
Query: 342 LGQGGFGTVYKGMLPD--GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCC 399
+G+G FG V ML D G+ VAVK + + + F+ E +++Q+ H ++V+LLG
Sbjct: 14 IGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 400 LETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGA 458
+E + + +V EY++ G+L ++ ++ + +V A
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--------------LKFSLDVCEA 114
Query: 459 VAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFD 518
+ Y+ + HRD+ + N+L+ + AKVSDFG ++ + + V+ T
Sbjct: 115 MEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----A 167
Query: 519 PEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
PE + +++ KSDV+SFG++L E+ + G+ P
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 30/212 (14%)
Query: 342 LGQGGFGTVYKGMLPD--GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCC 399
+G+G FG V ML D G+ VAVK + + + F+ E +++Q+ H ++V+LLG
Sbjct: 29 IGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 400 LETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGA 458
+E + + +V EY++ G+L ++ ++ + +V A
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--------------LKFSLDVCEA 129
Query: 459 VAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFD 518
+ Y+ + HRD+ + N+L+ + AKVSDFG ++ + + V+ T
Sbjct: 130 MEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----A 182
Query: 519 PEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
PE + +++ KSDV+SFG++L E+ + G+ P
Sbjct: 183 PEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 342 LGQGGFGTV----YKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG+G FG+V Y + + G++VAVK+ + Q F E+ IL ++ IVK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 397 GCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
G + LV EY+ +G L + H + + +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL---------------LLYSSQ 122
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQG 512
+ + Y+ S + HRD+ + NIL++ + K++DFG ++ +P DK + + Q
Sbjct: 123 ICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 179
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
++ PE + ++ +SDV+SFGVVL EL T
Sbjct: 180 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 14/246 (5%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D + LG+G FG V + A R+ A+ ++
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 174 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 230
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D ++ + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 231 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
Query: 553 TREEEE 558
+ +EE
Sbjct: 291 VKIDEE 296
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 14/246 (5%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D + LG+G FG V + A R+ A+ ++
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 195
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D ++ + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 196 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
Query: 553 TREEEE 558
+ +EE
Sbjct: 256 VKIDEE 261
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 30/212 (14%)
Query: 342 LGQGGFGTVYKGMLPD--GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCC 399
+G+G FG V ML D G+ VAVK + + + F+ E +++Q+ H ++V+LLG
Sbjct: 20 IGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 400 LETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGA 458
+E + + +V EY++ G+L ++ ++ + +V A
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--------------LKFSLDVCEA 120
Query: 459 VAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFD 518
+ Y+ + HRD+ + N+L+ + AKVSDFG ++ + + V+ T
Sbjct: 121 MEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----A 173
Query: 519 PEYFQSSQYTDKSDVYSFGVVLLELLT-GKKP 549
PE + + ++ KSDV+SFG++L E+ + G+ P
Sbjct: 174 PEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 14/246 (5%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D + LG+G FG V + A R+ A+ ++
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 193
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D ++ + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 194 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 553 TREEEE 558
+ +EE
Sbjct: 254 VKIDEE 259
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 14/246 (5%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D + LG+G FG V + A R+ A+ ++
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLVY-EYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D ++ + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 553 TREEEE 558
+ +EE
Sbjct: 245 VKIDEE 250
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 111/252 (44%), Gaps = 32/252 (12%)
Query: 300 FKQNGGYLLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGS 359
+K+ L Q+ C SS+ K + + + ++ + LG G FG V+ +
Sbjct: 148 YKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHT 207
Query: 360 IVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPV-LVYEYISNGTLS 418
VAVK + +E F+ E ++ + H +VKL T+ P+ ++ E+++ G+L
Sbjct: 208 KVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLL 264
Query: 419 HHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSS 478
+ + + ++A +A++ I HRD++++
Sbjct: 265 DFLKSDEGSKQPLPKL--------------IDFSAQIAEGMAFIEQRNYI---HRDLRAA 307
Query: 479 NILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGV 538
NIL+ K++DFG +R + + PE +T KSDV+SFG+
Sbjct: 308 NILVSASLVCKIADFGLAR----------VGAKFPIKWTAPEAINFGSFTIKSDVWSFGI 357
Query: 539 VLLELLT-GKKP 549
+L+E++T G+ P
Sbjct: 358 LLMEIVTYGRIP 369
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAID----KTQIEQFINEVVILSQINHRHIVKLLG 397
+G+G FG VYKG+ D V + ID + +IE E+ +LSQ + +I + G
Sbjct: 27 IGKGSFGEVYKGI--DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 398 CCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAG 457
L++ ++ EY+ G+ + + E+
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIAT-----------------ILREILK 127
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYF 517
+ Y+HS I HRDIK++N+LL ++ K++DFG + + + + V GT +
Sbjct: 128 GLDYLHSERKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWM 183
Query: 518 DPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
PE + S Y K+D++S G+ +EL G+ P
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 20/220 (9%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIE---QFINEVVILSQINHR 390
N+ + +G+G F VY+ L DG VA+K+ + D + I E+ +L Q+NH
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+++K +E +V E G LS I +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW------------K 140
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAV 510
++ A+ +MHS + HRDIK +N+ + K+ D G R + KT ++
Sbjct: 141 YFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFF-SSKTTAAHSL 196
Query: 511 QGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE + Y KSD++S G +L E+ + P
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 40/227 (17%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIV 393
++ + +G GGFG V+K DG +KR K E+ EV L++++H +IV
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV----KYNNEKAEREVKALAKLDHVNIV 67
Query: 394 KLLGCC----------------LETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
GC +T+ + E+ GTL I
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA--- 124
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+ + ++ V Y+HS I +RD+K SNI L D K+ DFG
Sbjct: 125 -----------LELFEQITKGVDYIHSKKLI---NRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 498 SVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELL 544
S+ ND + +GT Y PE S Y + D+Y+ G++L ELL
Sbjct: 171 SLKNDGKRXRS--KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 28/235 (11%)
Query: 318 SEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIE- 375
++KAK+ ++ D++ + LG G G V K P G I+A K K I
Sbjct: 5 TQKAKVGELKD-----DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN 59
Query: 376 QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXX 435
Q I E+ +L + N +IV G + E++ G+L + +
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-- 117
Query: 436 XXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGT 495
+V+ V +AY+ I HRD+K SNIL++ + K+ DFG
Sbjct: 118 --------------KVSIAVLRGLAYLREKHQI--MHRDVKPSNILVNSRGEIKLCDFGV 161
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
S + + + + GT Y PE Q + Y+ +SD++S G+ L+EL G+ PI
Sbjct: 162 SGQLIDS---MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 14/246 (5%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D + LG+G FG V + A R+ A+ ++
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 193
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D + + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 553 TREEEE 558
+ +EE
Sbjct: 254 VKIDEE 259
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 14/246 (5%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D + LG+G FG V + A R+ A+ ++
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLVY-EYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D ++ + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 553 TREEEE 558
+ +EE
Sbjct: 245 VKIDEE 250
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 23/222 (10%)
Query: 335 NYNQSRFLGQGGFGTVYKGML------PDGSIVAVKRSRAIDKTQIE-QFINEVVILSQI 387
N R LG G FG VY+G + P VAVK + Q E F+ E +I+S+
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
NH++IV+ +G L++ ++ E ++ G L + + +
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---------TRPRPSQPSSLAMLD 142
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKT 504
+ VA ++A Y+ I HRDI + N LL AK+ DFG ++ +
Sbjct: 143 LLHVARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASY 199
Query: 505 HLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+ + PE F +T K+D +SFGV+L E+ +
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 49/243 (20%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
R ++ + LGQG FG V K D A+K+ R ++ ++ ++EV +L+ +NH
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVXLLASLNH 61
Query: 390 RHIVKLLGCCLETEVPV-------------LVYEYISNGTLSHHIHDHXXXXXXXXXXXX 436
+++V+ LE V + EY N TL IH
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW-- 119
Query: 437 XXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTS 496
R+ ++ A++Y+HS I HR++K NI +D+ + K+ DFG +
Sbjct: 120 -------------RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLA 163
Query: 497 RSV--------------PNDKTHLTTAVQGTFGYFDPEYFQ-SSQYTDKSDVYSFGVVLL 541
++V P +LT+A+ GT Y E + Y +K D YS G++
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFF 222
Query: 542 ELL 544
E +
Sbjct: 223 EXI 225
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAID----KTQIEQFINEVVILSQINHRHIVKLLG 397
+G+G FG V+KG+ D V + ID + +IE E+ +LSQ + ++ K G
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 398 CCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC---E 454
L+ ++ EY+ G+ + ++A E
Sbjct: 88 SYLKDTKLWIIMEYLGGGS--------------------ALDLLEPGPLDETQIATILRE 127
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
+ + Y+HS I HRDIK++N+LL + K++DFG + + + + V GT
Sbjct: 128 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTP 183
Query: 515 GYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ PE + S Y K+D++S G+ +EL G+ P
Sbjct: 184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAID----KTQIEQFINEVVILSQINHRHIVKLLG 397
+G+G FG V+KG+ D V + ID + +IE E+ +LSQ + ++ K G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 398 CCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC---E 454
L+ ++ EY+ G+ + ++A E
Sbjct: 73 SYLKDTKLWIIMEYLGGGS--------------------ALDLLEPGPLDETQIATILRE 112
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
+ + Y+HS I HRDIK++N+LL + K++DFG + + + + V GT
Sbjct: 113 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTP 168
Query: 515 GYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ PE + S Y K+D++S G+ +EL G+ P
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 18/246 (7%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D N + LG+G FG V + A R+ A+ ++
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR----SKRNEFVP 132
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFG 189
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D ++ + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
Query: 553 TREEEE 558
+ +EE
Sbjct: 250 VKIDEE 255
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 24/240 (10%)
Query: 329 LQRATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQ 386
++ D++ + LG G G V+K P G ++A K K I Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
N +IV G + E++ G+L +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------------- 107
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+V+ V + Y+ I HRD+K SNIL++ + K+ DFG S + + +
Sbjct: 108 ---KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 159
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLT-REEEERNLVAYF 565
+ GT Y PE Q + Y+ +SD++S G+ L+E+ G+ PI +E+ R +A F
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF 219
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 23/224 (10%)
Query: 329 LQRATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQ 386
++ D++ + LG G G V+K P G ++A K K I Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
N +IV G + E++ G+L +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------------- 107
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+V+ V + Y+ I HRD+K SNIL++ + K+ DFG S + + +
Sbjct: 108 ---KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 159
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE Q + Y+ +SD++S G+ L+E+ G+ PI
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 23/224 (10%)
Query: 329 LQRATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQ 386
++ D++ + LG G G V+K P G ++A K K I Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
N +IV G + E++ G+L +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------------- 107
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+V+ V + Y+ I HRD+K SNIL++ + K+ DFG S + + +
Sbjct: 108 ---KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 159
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE Q + Y+ +SD++S G+ L+E+ G+ PI
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 23/219 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQINHRH 391
D++ + LG G G V+K P G ++A K K I Q I E+ +L + N +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 392 IVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
IV G + E++ G+L + +V
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----------------KV 136
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQ 511
+ V + Y+ I HRD+K SNIL++ + K+ DFG S + + + +
Sbjct: 137 SIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFV 191
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE Q + Y+ +SD++S G+ L+E+ G+ PI
Sbjct: 192 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 14/246 (5%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D + LG+G FG V + A R+ A+ ++
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLVY-EYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D + + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 553 TREEEE 558
+ +EE
Sbjct: 245 VKIDEE 250
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 23/224 (10%)
Query: 329 LQRATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQ 386
++ D++ + LG G G V+K P G ++A K K I Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
N +IV G + E++ G+L +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------------- 107
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+V+ V + Y+ I HRD+K SNIL++ + K+ DFG S + + +
Sbjct: 108 ---KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 159
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE Q + Y+ +SD++S G+ L+E+ G+ PI
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 23/219 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQINHRH 391
D++ + LG G G V+K P G ++A K K I Q I E+ +L + N +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 392 IVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
IV G + E++ G+L + +V
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----------------KV 171
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQ 511
+ V + Y+ I HRD+K SNIL++ + K+ DFG S + + + +
Sbjct: 172 SIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFV 226
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE Q + Y+ +SD++S G+ L+E+ G+ PI
Sbjct: 227 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 14/246 (5%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D + LG+G FG V + A R+ A+ ++
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D + + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 553 TREEEE 558
+ +EE
Sbjct: 245 VKIDEE 250
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 23/224 (10%)
Query: 329 LQRATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQ 386
++ D++ + LG G G V+K P G ++A K K I Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
N +IV G + E++ G+L +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG------------- 107
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+V+ V + Y+ I HRD+K SNIL++ + K+ DFG S + + +
Sbjct: 108 ---KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---M 159
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE Q + Y+ +SD++S G+ L+E+ G+ PI
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 14/246 (5%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D + LG+G FG V + A R+ A+ ++
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 193
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D + + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 194 LARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 553 TREEEE 558
+ +EE
Sbjct: 254 VKIDEE 259
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 40/250 (16%)
Query: 311 RLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAI 369
R S + A++F ++ ++ ++ R +G G FG VY + + +VA+K+
Sbjct: 34 RAGSLKDPDVAELFFKDDPEKL---FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS 90
Query: 370 DKTQIEQF---INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXX 426
K E++ I EV L ++ H + ++ GC L LV EY G+ S + H
Sbjct: 91 GKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK 149
Query: 427 XXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAV---AYMHSAASIPIFHRDIKSSNILLD 483
V +A GA+ AY+HS I HRD+K+ NILL
Sbjct: 150 PL------------------QEVEIAAVTHGALQGLAYLHSHNMI---HRDVKAGNILLS 188
Query: 484 DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEY---FQSSQYTDKSDVYSFGVVL 540
+ K+ DFG++ + GT + PE QY K DV+S G+
Sbjct: 189 EPGLVKLGDFGSASIMAP-----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 243
Query: 541 LELLTGKKPI 550
+EL K P+
Sbjct: 244 IELAERKPPL 253
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 27/236 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKGMLPDG----SIVAVKRSRAIDKTQIEQFINEVVI 383
+++ +++ + LG+G FG V+ +I A+K+ + +E + E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 384 LSQINHRHIVKLLGCCLET-EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
LS + + C +T E V EY++ G L +HI
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ----------------SCHK 115
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR-SVPN 501
A E+ + ++HS I +RD+K NILLD K++DFG + ++
Sbjct: 116 FDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 172
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEE 557
D T GT Y PE +Y D +SFGV+L E+L G+ P EEE
Sbjct: 173 DAK--TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 334 DNYNQSRFLGQGGFGTV-YKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
DN+ + +G+G G V + G +VAVK+ + + E NEVVI+ H ++
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V++ L + +V E++ G L+ I H V
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALT-DIVTHTRMNEEQIAA----------------VC 131
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG----TSRSVPNDKTHLTT 508
V A++ +H+ + HRDIKS +ILL K+SDFG S+ VP K
Sbjct: 132 LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX---- 184
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ GT + PE Y + D++S G++++E++ G+ P
Sbjct: 185 -LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 334 DNYNQSRFLGQGGFGTV-YKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
DN+ + +G+G G V + G +VAVK+ + + E NEVVI+ H ++
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V++ L + +V E++ G L+ I H V
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALT-DIVTHTRMNEEQIAA----------------VC 133
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG----TSRSVPNDKTHLTT 508
V A++ +H+ + HRDIKS +ILL K+SDFG S+ VP K
Sbjct: 134 LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX---- 186
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ GT + PE Y + D++S G++++E++ G+ P
Sbjct: 187 -LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 334 DNYNQSRFLGQGGFGTV-YKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
DN+ + +G+G G V + G +VAVK+ + + E NEVVI+ H ++
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V++ L + +V E++ G L+ I H V
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALT-DIVTHTRMNEEQIAA----------------VC 122
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG----TSRSVPNDKTHLTT 508
V A++ +H+ + HRDIKS +ILL K+SDFG S+ VP K
Sbjct: 123 LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX---- 175
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ GT + PE Y + D++S G++++E++ G+ P
Sbjct: 176 -LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 23/219 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQINHRH 391
D++ + LG G G V+K P G ++A K K I Q I E+ +L + N +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 392 IVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
IV G + E++ G+L + +V
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----------------KV 128
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQ 511
+ V + Y+ I HRD+K SNIL++ + K+ DFG S + + + +
Sbjct: 129 SIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFV 183
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE Q + Y+ +SD++S G+ L+E+ G+ PI
Sbjct: 184 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 334 DNYNQSRFLGQGGFGTV-YKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
DN+ + +G+G G V + G +VAVK+ + + E NEVVI+ H ++
Sbjct: 77 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V++ L + +V E++ G L+ I H V
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALT-DIVTHTRMNEEQIAA----------------VC 176
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG----TSRSVPNDKTHLTT 508
V A++ +H+ + HRDIKS +ILL K+SDFG S+ VP K
Sbjct: 177 LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX---- 229
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ GT + PE Y + D++S G++++E++ G+ P
Sbjct: 230 -LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 334 DNYNQSRFLGQGGFGTV-YKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
DN+ + +G+G G V + G +VAVK+ + + E NEVVI+ H ++
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V++ L + +V E++ G L+ I H V
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALT-DIVTHTRMNEEQIAA----------------VC 126
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG----TSRSVPNDKTHLTT 508
V A++ +H+ + HRDIKS +ILL K+SDFG S+ VP K
Sbjct: 127 LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX---- 179
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ GT + PE Y + D++S G++++E++ G+ P
Sbjct: 180 -LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVVILSQ 386
D+++ R LG+G FG VY I+A+K + K+Q+E Q E+ I S
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALK---VLFKSQLEKEGVEHQLRREIEIQSH 71
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +I+++ + + L+ E+ G L + H
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME--------- 122
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
E+A A+ Y H I HRDIK N+L+ K K++DFG S P+ +
Sbjct: 123 -------ELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX 172
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE + + +K D++ GV+ E L G P
Sbjct: 173 MC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 334 DNYNQSRFLGQGGFGTV-YKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
DN+ + +G+G G V + G +VAVK+ + + E NEVVI+ H ++
Sbjct: 154 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V++ L + +V E++ G L+ I H V
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALT-DIVTHTRMNEEQIAA----------------VC 253
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG----TSRSVPNDKTHLTT 508
V A++ +H+ + HRDIKS +ILL K+SDFG S+ VP K
Sbjct: 254 LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX---- 306
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ GT + PE Y + D++S G++++E++ G+ P
Sbjct: 307 -LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVVILSQ 386
D+++ R LG+G FG VY I+A+K + K+Q+E Q E+ I S
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALK---VLFKSQLEKEGVEHQLRREIEIQSH 70
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +I+++ + + L+ E+ G L + H
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME--------- 121
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
E+A A+ Y H I HRDIK N+L+ K K++DFG S P+ +
Sbjct: 122 -------ELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX 171
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE + + +K D++ GV+ E L G P
Sbjct: 172 MC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 94/240 (39%), Gaps = 53/240 (22%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIV 393
++ + +G GGFG V+K DG ++R K E+ EV L++++H +IV
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV----KYNNEKAEREVKALAKLDHVNIV 68
Query: 394 KLLGCC-------------LE----------------TEVPVLVYEYISNGTLSHHIHDH 424
GC LE T+ + E+ GTL I
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 425 XXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD 484
+ + ++ V Y+HS I HRD+K SNI L D
Sbjct: 129 RGEKLDKVLA--------------LELFEQITKGVDYIHSKKLI---HRDLKPSNIFLVD 171
Query: 485 KFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELL 544
K+ DFG S+ ND T +GT Y PE S Y + D+Y+ G++L ELL
Sbjct: 172 TKQVKIGDFGLVTSLKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVVILSQ 386
D+++ R LG+G FG VY I+A+K + K+Q+E Q E+ I S
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALK---VLFKSQLEKEGVEHQLRREIEIQSH 70
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +I+++ + + L+ E+ G L + H
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME--------- 121
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
E+A A+ Y H I HRDIK N+L+ K K++DFG S P+ +
Sbjct: 122 -------ELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRX 171
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE + + +K D++ GV+ E L G P
Sbjct: 172 MC---GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 92/222 (41%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL C + E Y NG L +I R
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 141
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 142 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 197
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 107/253 (42%), Gaps = 42/253 (16%)
Query: 335 NYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHR 390
++N LG+G FG V KG +I +K+ I +E + E +L+ ++
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 391 HIVKLLGCCLET-EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ L C +T + V EY++ G L +HI V
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ----------------QVGKFKEPQAV 123
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A E++ + ++H I +RD+K N++LD + K++DFG K H+
Sbjct: 124 FYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMC------KEHMMDG 174
Query: 510 VQ-----GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEE------E 558
V GT Y PE Y D +++GV+L E+L G+ P E+E E
Sbjct: 175 VTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
Query: 559 RNLVAYFISLAKE 571
N V+Y SL+KE
Sbjct: 235 HN-VSYPKSLSKE 246
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 27/236 (11%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKGMLPDG----SIVAVKRSRAIDKTQIEQFINEVVI 383
+++ +++ + LG+G FG V+ +I A+K+ + +E + E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 384 LSQINHRHIVKLLGCCLET-EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
LS + + C +T E V EY++ G L +HI
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ----------------SCHK 114
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR-SVPN 501
A E+ + ++HS I +RD+K NILLD K++DFG + ++
Sbjct: 115 FDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEE 557
D T GT Y PE +Y D +SFGV+L E+L G+ P EEE
Sbjct: 172 DAK--TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 16/246 (6%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D + LG+G FG V + A R+ A+ ++
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR--SKRNEFVPYK 136
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 137 PEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFG 193
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D + + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 553 TREEEE 558
+ +EE
Sbjct: 254 VKIDEE 259
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 15/246 (6%)
Query: 324 FTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAID-------KTQIEQ 376
+ A + + D N + LG+G FG V + A R+ A+ ++
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 377 FINEVVILSQINHR-HIVKLLGCCLETEVPVLV-YEYISNGTLSHHIHDHXXXXXXXXXX 434
++E+ IL I H ++V LLG C + P++V E+ G LS ++
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS-KRNEFVPYKT 136
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG 494
+ + + +VA + ++ S I HRD+ + NILL +K K+ DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 193
Query: 495 TSRSVPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICL 552
+R + D + + + PE YT +SDV+SFGV+L E+ + G P
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 553 TREEEE 558
+ +EE
Sbjct: 254 VKIDEE 259
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 37/225 (16%)
Query: 336 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQF---INEVVILSQINHRH 391
++ R +G G FG VY + + +VA+K+ K E++ I EV L ++ H +
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 392 IVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
++ GC L LV EY G+ S + H V +
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPL------------------QEVEI 117
Query: 452 ACEVAGAV---AYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
A GA+ AY+HS I HRD+K+ NILL + K+ DFG++ +
Sbjct: 118 AAVTHGALQGLAYLHSHNMI---HRDVKAGNILLSEPGLVKLGDFGSASIMAP-----AN 169
Query: 509 AVQGTFGYFDPEY---FQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT + PE QY K DV+S G+ +EL K P+
Sbjct: 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 23/218 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQINHRH 391
D++ + LG G G V+K P G ++A K K I Q I E+ +L + N +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 392 IVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
IV G + E++ G+L + +V
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----------------KV 112
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQ 511
+ V + Y+ I HRD+K SNIL++ + K+ DFG S + ++ +
Sbjct: 113 SIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE---MANEFV 167
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
GT Y PE Q + Y+ +SD++S G+ L+E+ G+ P
Sbjct: 168 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 39/230 (16%)
Query: 333 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQIN 388
+D Y R LG+G FG V K + ++ + + + KT E + EV +L Q++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +I+KL + LV E + G L I +
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----------------ISRKRFSEVDA 134
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDK---FSAKVSDFGTSRSVPNDKTH 505
R+ +V + YMH I HRD+K N+LL+ K + ++ DFG S TH
Sbjct: 135 ARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------TH 184
Query: 506 LTTAVQ-----GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ + GT Y PE + Y +K DV+S GV+L LL+G P
Sbjct: 185 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 233
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 111/268 (41%), Gaps = 42/268 (15%)
Query: 325 TAEELQRATDNYNQSRF----------LGQGGFGTVY----KGMLPDGSIVAVKRSRAID 370
TA + + +N N+ R LG+G FG V KG ++ +K+ I
Sbjct: 322 TANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ 381
Query: 371 KTQIEQFINEVVILSQINHRHIVKLLGCCLET-EVPVLVYEYISNGTLSHHIHDHXXXXX 429
+E + E +L+ + L C +T + V EY++ G L +HI
Sbjct: 382 DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ------- 434
Query: 430 XXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAK 489
+ V A E+A + ++ S I +RD+K N++LD + K
Sbjct: 435 ---------QVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIK 482
Query: 490 VSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
++DFG + D T GT Y PE Y D ++FGV+L E+L G+ P
Sbjct: 483 IADFGMCKENIWDGV-TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
Query: 550 ICLTREEE------ERNLVAYFISLAKE 571
E+E E N VAY S++KE
Sbjct: 542 FEGEDEDELFQSIMEHN-VAYPKSMSKE 568
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 340 RFLGQGGFGTVYKGML-PDGS----IVAVKRSRAIDK-TQIEQFINEVVILSQINHRHIV 393
R LG+G FG V P+G VAVK + I E+ IL + H +IV
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 394 KLLGCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
K G C E L+ E++ +G+L ++ + +++
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLK---------------QQLKY 131
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA-- 509
A ++ + Y+ S + HRD+ + N+L++ + K+ DFG ++++ DK T
Sbjct: 132 AVQICKGMDYLGSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDD 188
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
++ PE S++ SDV+SFGV L ELLT
Sbjct: 189 RDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 340 RFLGQGGFGTVYKGML-PDGS----IVAVKRSRAIDK-TQIEQFINEVVILSQINHRHIV 393
R LG+G FG V P+G VAVK + I E+ IL + H +IV
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 394 KLLGCCLET--EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
K G C E L+ E++ +G+L ++ + +++
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLK---------------QQLKY 119
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA-- 509
A ++ + Y+ S + HRD+ + N+L++ + K+ DFG ++++ DK T
Sbjct: 120 AVQICKGMDYLGSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDD 176
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
++ PE S++ SDV+SFGV L ELLT
Sbjct: 177 RDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 97/229 (42%), Gaps = 39/229 (17%)
Query: 333 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQIN 388
+D Y R LG+G FG V K + ++ + + + KT E + EV +L Q++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +I+KL + LV E + G L I +
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----------------ISRKRFSEVDA 128
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDK---FSAKVSDFGTSRSVPNDKTH 505
R+ +V + YMH I HRD+K N+LL+ K + ++ DFG S TH
Sbjct: 129 ARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------TH 178
Query: 506 LTTAVQ-----GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ + GT Y PE + Y +K DV+S GV+L LL+G P
Sbjct: 179 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 39/230 (16%)
Query: 333 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQIN 388
+D Y R LG+G FG V K + ++ + + + KT E + EV +L Q++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +I+KL + LV E + G L I +
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----------------ISRKRFSEVDA 151
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDK---FSAKVSDFGTSRSVPNDKTH 505
R+ +V + YMH I HRD+K N+LL+ K + ++ DFG S TH
Sbjct: 152 ARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------TH 201
Query: 506 LTTAVQ-----GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ + GT Y PE + Y +K DV+S GV+L LL+G P
Sbjct: 202 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 250
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 105/248 (42%), Gaps = 32/248 (12%)
Query: 335 NYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHR 390
++N LG+G FG V KG ++ +K+ I +E + E +L+
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 391 HIVKLLGCCLET-EVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ L C +T + V EY++ G L +HI + V
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ----------------QVGRFKEPHAV 124
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A E+A + ++ S I +RD+K N++LD + K++DFG + D T
Sbjct: 125 FYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKX 180
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEE------ERNLVA 563
GT Y PE Y D ++FGV+L E+L G+ P E+E E N VA
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN-VA 239
Query: 564 YFISLAKE 571
Y S++KE
Sbjct: 240 YPKSMSKE 247
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 36/240 (15%)
Query: 333 TDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQ 386
+DNY+ LG+G F V + G+ I+ K+ A D ++E+ E I +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +IV+L E LV++ ++ G L I
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI----------------VAREFYSEA 105
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF---SAKVSDFGTSRSVPNDK 503
+ ++ ++AY HS I HR++K N+LL K + K++DFG + V ND
Sbjct: 106 DASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-ND- 160
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVA 563
+ GT GY PE + Y+ D+++ GV+L LL G P +E++ L A
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW---DEDQHRLYA 217
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 39/230 (16%)
Query: 333 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQIN 388
+D Y R LG+G FG V K + ++ + + + KT E + EV +L Q++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +I+KL + LV E + G L I +
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----------------ISRKRFSEVDA 152
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDK---FSAKVSDFGTSRSVPNDKTH 505
R+ +V + YMH I HRD+K N+LL+ K + ++ DFG S TH
Sbjct: 153 ARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------TH 202
Query: 506 LTTAVQ-----GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ + GT Y PE + Y +K DV+S GV+L LL+G P
Sbjct: 203 FEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 251
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 29/223 (13%)
Query: 334 DNYNQSRFLGQGGFGTVYKG-MLPDGSIVAVKR--SRAIDKTQIEQFI-NEVVILSQINH 389
+++ LG+G F VY+ + G VA+K +A+ K + Q + NEV I Q+ H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
I++L ++ LV E NG ++ ++ + N
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN----------------RVKPFSENEA 114
Query: 450 R-VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG--TSRSVPNDKTHL 506
R ++ + Y+HS I HRD+ SN+LL + K++DFG T +P++K H
Sbjct: 115 RHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK-HY 170
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
T GT Y PE S + +SDV+S G + LL G+ P
Sbjct: 171 TLC--GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 36/240 (15%)
Query: 333 TDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQ 386
+DNY+ LG+G F V + G+ I+ K+ A D ++E+ E I +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 60
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +IV+L E LV++ ++ G L I
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI----------------VAREFYSEA 104
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF---SAKVSDFGTSRSVPNDK 503
+ ++ ++AY HS I HR++K N+LL K + K++DFG + V ND
Sbjct: 105 DASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-ND- 159
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVA 563
+ GT GY PE + Y+ D+++ GV+L LL G P +E++ L A
Sbjct: 160 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW---DEDQHRLYA 216
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 36/240 (15%)
Query: 333 TDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQ 386
+DNY+ LG+G F V + G+ I+ K+ A D ++E+ E I +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 84
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +IV+L E LV++ ++ G L I
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI----------------VAREFYSEA 128
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF---SAKVSDFGTSRSVPNDK 503
+ ++ ++AY HS I HR++K N+LL K + K++DFG + V ND
Sbjct: 129 DASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-ND- 183
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVA 563
+ GT GY PE + Y+ D+++ GV+L LL G P +E++ L A
Sbjct: 184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW---DEDQHRLYA 240
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 36/240 (15%)
Query: 333 TDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQ 386
+DNY+ LG+G F V + G+ I+ K+ A D ++E+ E I +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +IV+L E LV++ ++ G L I
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI----------------VAREFYSEA 105
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF---SAKVSDFGTSRSVPNDK 503
+ ++ ++AY HS I HR++K N+LL K + K++DFG + V ND
Sbjct: 106 DASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-ND- 160
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVA 563
+ GT GY PE + Y+ D+++ GV+L LL G P +E++ L A
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW---DEDQHRLYA 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 25/223 (11%)
Query: 329 LQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSR--AIDKTQIEQFINEVVILSQ 386
Q + Y + +G+G +G VYK G IVA+KR R A D+ I E+ +L +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
++H +IV L+ LV+E++
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDL-----------------KKVLDENKTGLQD 118
Query: 447 NRVRVAC-EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH 505
+++++ ++ VA+ H I HRD+K N+L++ + K++DFG +R+
Sbjct: 119 SQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175
Query: 506 LTTAVQGTFGYFDPEYFQ-SSQYTDKSDVYSFGVVLLELLTGK 547
T V T Y P+ S +Y+ D++S G + E++TGK
Sbjct: 176 YTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 25/223 (11%)
Query: 329 LQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSR--AIDKTQIEQFINEVVILSQ 386
Q + Y + +G+G +G VYK G IVA+KR R A D+ I E+ +L +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
++H +IV L+ LV+E++
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDL-----------------KKVLDENKTGLQD 118
Query: 447 NRVRVAC-EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH 505
+++++ ++ VA+ H I HRD+K N+L++ + K++DFG +R+
Sbjct: 119 SQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175
Query: 506 LTTAVQGTFGYFDPEYFQ-SSQYTDKSDVYSFGVVLLELLTGK 547
T V T Y P+ S +Y+ D++S G + E++TGK
Sbjct: 176 YTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 43/282 (15%)
Query: 342 LGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCL 400
LG G FG VYK + G++ A K + ++E +I E+ IL+ +H +IVKLLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 401 ETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC-EVAGAV 459
++ E+ G + +++V C ++ A+
Sbjct: 79 HDGKLWIMIEFCPGGAVD----------------AIMLELDRGLTEPQIQVVCRQMLEAL 122
Query: 460 AYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKT-HLTTAVQGTFGYFD 518
++HS I HRD+K+ N+L+ + +++DFG S N KT + GT +
Sbjct: 123 NFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMA 177
Query: 519 PEY-----FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENK 573
PE + + Y K+D++S G+ L+E+ + P E N + + +AK +
Sbjct: 178 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP------HHELNPMRVLLKIAKSDP 231
Query: 574 LLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
+ ++ + E R D +A L N + RP+ Q+
Sbjct: 232 PTLLTPSKWSVEFR--DFLKIA------LDKNPETRPSAAQL 265
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 342 LGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCL 400
LG G FG VYK + G++ A K + ++E +I E+ IL+ +H +IVKLLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 401 ETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC-EVAGAV 459
++ E+ G + +++V C ++ A+
Sbjct: 87 HDGKLWIMIEFCPGGAVD----------------AIMLELDRGLTEPQIQVVCRQMLEAL 130
Query: 460 AYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKT-HLTTAVQGTFGYFD 518
++HS I HRD+K+ N+L+ + +++DFG S N KT + GT +
Sbjct: 131 NFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQKRDSFIGTPYWMA 185
Query: 519 PEY-----FQSSQYTDKSDVYSFGVVLLELLTGKKP 549
PE + + Y K+D++S G+ L+E+ + P
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 30/240 (12%)
Query: 317 SSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRA-IDKTQI 374
S E+ FTAE+L+ + +G+G +G+V K + P G I+AVKR R+ +D+ +
Sbjct: 12 SPEQHWDFTAEDLKDLGE-------IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQ 64
Query: 375 EQFINEV-VILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXX 433
+Q + ++ V++ + +IV+ G + E +S + + +
Sbjct: 65 KQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIP- 123
Query: 434 XXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDF 493
+ +A A H ++ I HRDIK SNILLD + K+ DF
Sbjct: 124 -------------EEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDF 170
Query: 494 GTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQ----YTDKSDVYSFGVVLLELLTGKKP 549
G S + + A G Y PE S Y +SDV+S G+ L EL TG+ P
Sbjct: 171 GISGQLVDSIAKTRDA--GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQ------FINEVVILSQ 386
++++ R +G+GGFG VY D G + A+K +DK +I+ +NE ++LS
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK---CLDKKRIKMKQGETLALNERIMLSL 245
Query: 387 INHRHIVKLLGCCLETEVP---VLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
++ ++ P + + ++ G L +H+ H
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF--------- 296
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
A E+ + +MH+ + +RD+K +NILLD+ ++SD G + K
Sbjct: 297 -------YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
Query: 504 THLTTAVQGTFGYFDPEYFQSS-QYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLV 562
H + GT GY PE Q Y +D +S G +L +LL G P + +++ +
Sbjct: 347 PHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 403
Query: 563 AYFISLAKE 571
+++A E
Sbjct: 404 RMTLTMAVE 412
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQ------FINEVVILSQ 386
++++ R +G+GGFG VY D G + A+K +DK +I+ +NE ++LS
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK---CLDKKRIKMKQGETLALNERIMLSL 245
Query: 387 INHRHIVKLLGCCLETEVP---VLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
++ ++ P + + ++ G L +H+ H
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF--------- 296
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
A E+ + +MH+ + +RD+K +NILLD+ ++SD G + K
Sbjct: 297 -------YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
Query: 504 THLTTAVQGTFGYFDPEYFQSS-QYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLV 562
H + GT GY PE Q Y +D +S G +L +LL G P + +++ +
Sbjct: 347 PHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 403
Query: 563 AYFISLAKE 571
+++A E
Sbjct: 404 RMTLTMAVE 412
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 92/222 (41%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 134
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 135 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
A GT Y PE SD+++ G ++ +L+ G P
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQ------FINEVVILSQ 386
++++ R +G+GGFG VY D G + A+K +DK +I+ +NE ++LS
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK---CLDKKRIKMKQGETLALNERIMLSL 245
Query: 387 INHRHIVKLLGCCLETEVP---VLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
++ ++ P + + ++ G L +H+ H
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF--------- 296
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
A E+ + +MH+ + +RD+K +NILLD+ ++SD G + K
Sbjct: 297 -------YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346
Query: 504 THLTTAVQGTFGYFDPEYFQSS-QYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLV 562
H + GT GY PE Q Y +D +S G +L +LL G P + +++ +
Sbjct: 347 PHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 403
Query: 563 AYFISLAKE 571
+++A E
Sbjct: 404 RMTLTMAVE 412
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQ------FINEVVILSQ 386
++++ R +G+GGFG VY D G + A+K +DK +I+ +NE ++LS
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK---CLDKKRIKMKQGETLALNERIMLSL 244
Query: 387 INHRHIVKLLGCCLETEVP---VLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
++ ++ P + + ++ G L +H+ H
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF--------- 295
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
A E+ + +MH+ + +RD+K +NILLD+ ++SD G + K
Sbjct: 296 -------YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 345
Query: 504 THLTTAVQGTFGYFDPEYFQSS-QYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLV 562
H + GT GY PE Q Y +D +S G +L +LL G P + +++ +
Sbjct: 346 PHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 402
Query: 563 AYFISLAKE 571
+++A E
Sbjct: 403 RMTLTMAVE 411
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 94/223 (42%), Gaps = 32/223 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPDGS-IVAVKRSRAIDKTQIE------QFINEVVILSQ 386
D++ R LG+G FG VY IVA+K + K+QIE Q E+ I +
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALK---VLFKSQIEKEGVEHQLRREIEIQAH 79
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
++H +I++L + L+ EY G L +
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK----------------SCTFDEQ 123
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ E+A A+ Y H + HRDIK N+LL K K++DFG S P+ +
Sbjct: 124 RTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR-- 178
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + + +K D++ GV+ ELL G P
Sbjct: 179 -KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRK---------------IGSFDETCTRF 136
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 137 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE + SD+++ G ++ +L+ G P
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 40/224 (17%)
Query: 340 RFLGQGGFGTVYKGMLPDGS----IVAVK-------RSRAIDKTQIEQFINEVVILSQIN 388
+ LGQG FG V+ GS + A+K + R +T++E+ IL ++N
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER-----DILVEVN 85
Query: 389 HRHIVKLLGCCLETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H IVKL +TE + L+ +++ G L +
Sbjct: 86 HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL----------- 133
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR-SVPNDKTHL 506
E+A A+ ++HS + I +RD+K NILLD++ K++DFG S+ S+ ++K
Sbjct: 134 -----AELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK-- 183
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE +T +D +SFGV++ E+LTG P
Sbjct: 184 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 40/224 (17%)
Query: 340 RFLGQGGFGTVYKGMLPDGS----IVAVK-------RSRAIDKTQIEQFINEVVILSQIN 388
+ LGQG FG V+ GS + A+K + R +T++E+ IL ++N
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER-----DILVEVN 84
Query: 389 HRHIVKLLGCCLETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H IVKL +TE + L+ +++ G L +
Sbjct: 85 HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL----------- 132
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR-SVPNDKTHL 506
E+A A+ ++HS + I +RD+K NILLD++ K++DFG S+ S+ ++K
Sbjct: 133 -----AELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK-- 182
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE +T +D +SFGV++ E+LTG P
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 24/226 (10%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILS 385
++ +++ + LG+G F TV + +I +++ I + ++ E ++S
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 386 QINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXX 445
+++H VKL + E Y NG L +I
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDET 110
Query: 446 XNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKT 504
R A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 111 CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 166
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 167 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 24/226 (10%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILS 385
++ +++ + LG+G F TV + +I +++ I + ++ E ++S
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 386 QINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXX 445
+++H VKL + E Y NG L +I
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDET 107
Query: 446 XNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKT 504
R A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 108 CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 163
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 164 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 24/226 (10%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILS 385
++ +++ + LG+G F TV + +I +++ I + ++ E ++S
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 386 QINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXX 445
+++H VKL + E Y NG L +I
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDET 109
Query: 446 XNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKT 504
R A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 110 CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 165
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 166 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 28 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 128
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D++ +V+DFG ++ V
Sbjct: 129 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR---- 181
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 182 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 40/224 (17%)
Query: 340 RFLGQGGFGTVYKGMLPDGS----IVAVK-------RSRAIDKTQIEQFINEVVILSQIN 388
+ LGQG FG V+ GS + A+K + R +T++E+ IL ++N
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER-----DILVEVN 84
Query: 389 HRHIVKLLGCCLETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H IVKL +TE + L+ +++ G L +
Sbjct: 85 HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF------------- 130
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR-SVPNDKTHL 506
E+A A+ ++HS + I +RD+K NILLD++ K++DFG S+ S+ ++K
Sbjct: 131 ---YLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK-- 182
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE +T +D +SFGV++ E+LTG P
Sbjct: 183 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 24/226 (10%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILS 385
++ +++ + LG+G F TV + +I +++ I + ++ E ++S
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 386 QINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXX 445
+++H VKL + E Y NG L +I
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDET 108
Query: 446 XNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKT 504
R A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 109 CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 165 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 137
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 138 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE SD+++ G ++ +L+ G P
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFXEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 162
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 163 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----A 215
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 216 TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 21/220 (9%)
Query: 331 RATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIEQ--FINEVVILSQI 387
RA D Y +G G +G K DG I+ K T+ E+ ++EV +L ++
Sbjct: 4 RAED-YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 388 NHRHIVKLLGCCLETEVPVL--VYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXX 445
H +IV+ ++ L V EY G L+ I
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV--------- 113
Query: 446 XNRVRVACEVAGAVAYMH--SAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+RV ++ A+ H S + HRD+K +N+ LD K + K+ DFG +R + N
Sbjct: 114 ---LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHD 169
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLEL 543
T A GT Y PE Y +KSD++S G +L EL
Sbjct: 170 TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 133
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 134 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE SD+++ G ++ +L+ G P
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFAEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 42 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 142
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 195
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 128/305 (41%), Gaps = 52/305 (17%)
Query: 327 EELQ-RATDNYNQSRFL------GQGGFGTVYKGMLPDGSIVAVK---RSRAIDKTQIEQ 376
EEL+ +A N RFL G+G F TVYKG+ + ++ + R + K++ ++
Sbjct: 12 EELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR 71
Query: 377 FINEVVILSQINHRHIVKLLGCCLET----EVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
F E L + H +IV+ T + VLV E ++GTL ++
Sbjct: 72 FKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKV- 130
Query: 433 XXXXXXXXXXXXXXNRVRVAC-EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF-SAKV 490
+R C ++ + ++H+ PI HRD+K NI + S K+
Sbjct: 131 ----------------LRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKI 173
Query: 491 SDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
D G + + AV GT + PE ++ +Y + DVY+FG LE T + P
Sbjct: 174 GDLGLA---TLKRASFAKAVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPY 229
Query: 551 CLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRP 610
E +N + + K A K A I V E+ GC+R N +R
Sbjct: 230 S-----ECQNAAQIYRRVTSGVK-----PASFDKVA----IPEVKEIIEGCIRQNKDERY 275
Query: 611 TMKQV 615
++K +
Sbjct: 276 SIKDL 280
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFXEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 39/237 (16%)
Query: 331 RATDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSR------AIDKTQIEQF--- 377
+ ++Y + R LG G +G V K + +I +K+S+ + D IE+F
Sbjct: 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE 92
Query: 378 -INEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXX 436
NE+ +L ++H +I+KL + + LV E+ G L I +
Sbjct: 93 IYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR------------ 140
Query: 437 XXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDK---FSAKVSDF 493
+ + ++ + Y+H I HRDIK NILL++K + K+ DF
Sbjct: 141 ----HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDF 193
Query: 494 GTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
G S D + GT Y PE + +Y +K DV+S GV++ LL G P
Sbjct: 194 GLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 126/305 (41%), Gaps = 37/305 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINH 389
++ + Q LG G + TVYKG+ + + +D + I E+ ++ ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+IV+L LV+E++ N + N V
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKY------------MDSRTVGNTPRGLELNLV 110
Query: 450 R-VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
+ ++ +A+ H I HRD+K N+L++ + K+ DFG +R+ ++
Sbjct: 111 KYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS 167
Query: 509 AVQGTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLV----- 562
V T Y P+ S+ Y+ D++S G +L E++TGK T +EE+ L+
Sbjct: 168 EVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMG 226
Query: 563 ----AYFISLAKENKLLEILDARVAKEARE-------EDIEA-VAELAMGCLRLNSKKRP 610
+ + S+ K K + R ++ R+ E ++ + + G L+LN R
Sbjct: 227 TPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRL 286
Query: 611 TMKQV 615
+ KQ
Sbjct: 287 SAKQA 291
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFXEP 162
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 163 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 215
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 216 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 91/221 (41%), Gaps = 27/221 (12%)
Query: 342 LGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQI-EQFINEVVILSQINHRHIVKLLGCC 399
LG+GGFG V++ D A+KR R ++ E+ + EV L+++ H IV+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 400 LETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC-----E 454
LE E + S ++ + R R C +
Sbjct: 73 LEKNT----TEKLQPS--SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLT------- 507
+A AV ++HS + HRD+K SNI KV DFG ++ D+ T
Sbjct: 127 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 508 ----TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELL 544
T GT Y PE + Y+ K D++S G++L ELL
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFXEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 136
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 137 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 137
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 138 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 194 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 136
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 137 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 36 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFXEP 136
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 137 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 189
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 190 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 136
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 137 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 134
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 135 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 136
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 137 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 139
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 140 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 195
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 196 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 134
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 135 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 21/220 (9%)
Query: 331 RATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIEQ--FINEVVILSQI 387
RA D Y +G G +G K DG I+ K T+ E+ ++EV +L ++
Sbjct: 4 RAED-YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 388 NHRHIVKLLGCCLETEVPVL--VYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXX 445
H +IV+ ++ L V EY G L+ I
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV--------- 113
Query: 446 XNRVRVACEVAGAVAYMH--SAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+RV ++ A+ H S + HRD+K +N+ LD K + K+ DFG +R + +D
Sbjct: 114 ---LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLEL 543
+ T V GT Y PE Y +KSD++S G +L EL
Sbjct: 171 SFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY++ G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 133
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 134 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 190 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 118
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 119 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 174
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 175 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 91/224 (40%), Gaps = 24/224 (10%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKGMLPDGSIV----AVKRSRAIDKTQIEQFINEVVILSQ 386
R Y + RFLG+GGF Y+ D V V +S + Q E+ E+ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+++ H+V G + + +V E +L +H
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA------------- 144
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
R + + G V Y+H+ I HRD+K N+ L+D K+ DFG + + D
Sbjct: 145 -RYFMRQTIQG-VQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE ++ + D++S G +L LL GK P
Sbjct: 200 KT-LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F TV + +I +++ I + ++ E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 136
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 137 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 38/235 (16%)
Query: 340 RFLGQGGFGTVY---KGMLPD-GSIVAVK-------RSRAIDKTQIEQFINEVVILSQIN 388
+ LGQG FG V+ K PD G + A+K + R +T++E+ IL+ +N
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER-----DILADVN 88
Query: 389 HRHIVKLLGCCLETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H +VKL +TE + L+ +++ G L +
Sbjct: 89 HPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL----------- 136
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLT 507
E+A + ++HS + I +RD+K NILLD++ K++DFG S+ D
Sbjct: 137 -----AELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEA-IDHEKKA 187
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLV 562
+ GT Y PE ++ +D +S+GV++ E+LTG P +E L+
Sbjct: 188 YSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + +G G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY+ G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + KV+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 23/221 (10%)
Query: 331 RATDNYNQSRFLGQGGFG-TVYKGMLPDGSIVAVKR---SRAIDKTQIEQFINEVVILSQ 386
++ + Y + + +G+G FG + DG +K SR K + E+ EV +L+
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER-EESRREVAVLAN 79
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +IV+ E +V +Y G L I+
Sbjct: 80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI------------ 127
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ ++ A+ ++H I HRDIKS NI L + ++ DFG +R V N L
Sbjct: 128 --LDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIAR-VLNSTVEL 181
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
A GT Y PE ++ Y +KSD+++ G VL EL T K
Sbjct: 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 334 DNYNQSRFLGQGGFGTVYK----GMLPDG-SI-VAVKRSR-AIDKTQIEQFINEVVILSQ 386
+N + LG G FG V G+ G SI VAVK + D ++ E ++E+ +++Q
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 387 I-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXX 445
+ +H +IV LLG C + L++EY G L +++
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 446 XNRVRV-------ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
V A +VA + ++ + + HRD+ + N+L+ K+ DFG +R
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCV---HRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 499 VPNDKTHLTTA-VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT 545
+ +D ++ + + PE YT KSDV+S+G++L E+ +
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY+ G + H+ +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEPHAR 145
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V T
Sbjct: 146 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWT 198
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 24/222 (10%)
Query: 334 DNYNQSRFLGQGGFGT-VYKGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
+++ + LG+G F T V L A+K + I + ++ E ++S+++H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
VKL + E Y NG L +I R
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK---------------IGSFDETCTRF 134
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTT 508
A E+ A+ Y+H I HRD+K NILL++ +++DFGT++ + P K
Sbjct: 135 YTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE SD+++ G ++ +L+ G P
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY+ G + H+ +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEPHAR 145
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V T
Sbjct: 146 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWX 198
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY+ G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY+ G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY+ G + H+ +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFXEPHAR 145
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V T
Sbjct: 146 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWX 198
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY+ G + H+ +
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEPHAR 130
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V T
Sbjct: 131 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWT 183
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 184 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY+ G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY+ G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFXEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY+ G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFXEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + +G G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY+ G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR----------------RIGRFSEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + KV+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 33/218 (15%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAID---KTQIEQFINEVVILSQINHRHIVKLLGC 398
LG G FG VYK + S++A ++ ID + ++E ++ E+ IL+ +H +IVKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA--AKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 399 CLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC-EVAG 457
++ E+ + G + ++++V C +
Sbjct: 103 FYYENNLWILIEFCAGGAVD----------------AVMLELERPLTESQIQVVCKQTLD 146
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKT-HLTTAVQGTFGY 516
A+ Y+H I HRD+K+ NIL K++DFG S N +T + GT +
Sbjct: 147 ALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGV--SAKNTRTIQRRDSFIGTPYW 201
Query: 517 FDPEYF-----QSSQYTDKSDVYSFGVVLLELLTGKKP 549
PE + Y K+DV+S G+ L+E+ + P
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 342 LGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCL 400
LG+G +G VY G L + +A+K D + E+ + + H++IV+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 401 ETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
E + E + G+LS + ++ +
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-------------QILEGLK 136
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSA--KVSDFGTSRSVPNDKTHLTTAVQGTFGYFD 518
Y+H I HRDIK N+L++ +S K+SDFGTS+ + T GT Y
Sbjct: 137 YLHDNQ---IVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMA 191
Query: 519 PEYFQSSQ--YTDKSDVYSFGVVLLELLTGKKPI 550
PE Y +D++S G ++E+ TGK P
Sbjct: 192 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + +G G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY+ G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR----------------RIGRFSEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+L+D + KV+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ ++ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 95/230 (41%), Gaps = 39/230 (16%)
Query: 333 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQIN 388
+D Y R LG+G FG V K + ++ + + + KT E + EV +L Q++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +I KL + LV E + G L I +
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI----------------ISRKRFSEVDA 128
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDK---FSAKVSDFGTSRSVPNDKTH 505
R+ +V + Y H I HRD+K N+LL+ K + ++ DFG S TH
Sbjct: 129 ARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------TH 178
Query: 506 LTTAVQ-----GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ + GT Y PE + Y +K DV+S GV+L LL+G P
Sbjct: 179 FEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 92/222 (41%), Gaps = 30/222 (13%)
Query: 336 YNQSRFLGQGGFGTVYKG-MLPDGSIVAVKRSRAIDK----TQIEQFINEVVILSQINHR 390
Y +G GGF V + G +VA+K +DK + + + E+ L + H+
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIK---IMDKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
HI +L +V EY G L +I RV
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYI---------------ISQDRLSEEETRV- 112
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGT-SRSVPNDKTHLTTA 509
V ++ AVAY+HS HRD+K N+L D+ K+ DFG ++ N HL T
Sbjct: 113 VFRQIVSAVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC 169
Query: 510 VQGTFGYFDPEYFQSSQYT-DKSDVYSFGVVLLELLTGKKPI 550
G+ Y PE Q Y ++DV+S G++L L+ G P
Sbjct: 170 C-GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+++D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D + + + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY+ G + H+
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 49/242 (20%)
Query: 336 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKR--SRAIDKTQIEQFINEVVILSQIN-HRH 391
Y + LG+G +G V+K + G +VAVK+ + T ++ E++IL++++ H +
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 392 IVKLLGCC-LETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
IV LL + + V LV++Y+ T H + ++
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYME--TDLHAV----------------IRANILEPVHKQ 112
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPN-------- 501
V ++ + Y+HS + HRD+K SNILL+ + KV+DFG SRS N
Sbjct: 113 YVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNI 169
Query: 502 ------------DKTHLTTAVQGTFGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGKK 548
D + T T Y PE S++YT D++S G +L E+L G K
Sbjct: 170 PLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-K 228
Query: 549 PI 550
PI
Sbjct: 229 PI 230
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D + + + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY+ G + H+
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D + + + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY+ G + H+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEP 142
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 195
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D + + + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY+ G + H+
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D + + + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY+ G + H+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEP 142
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 195
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D + + + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY+ G + H+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEP 142
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 195
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 90/224 (40%), Gaps = 24/224 (10%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKGMLPDGSIV----AVKRSRAIDKTQIEQFINEVVILSQ 386
R Y + RFLG+GGF Y+ D V V +S + Q E+ E+ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+++ H+V G + + +V E +L +H
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA------------- 144
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
R + + G V Y+H+ I HRD+K N+ L+D K+ DFG + + D
Sbjct: 145 -RYFMRQTIQG-VQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER- 198
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE ++ + D++S G +L LL GK P
Sbjct: 199 KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 22/230 (9%)
Query: 334 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIEQFINEVV---ILSQINH 389
D + R LG+GGFG V+ M G + A K+ + + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 390 RHIVKLLGCCLETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
R IV L ET+ + LV ++ G + +HI++
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYN------------VDEDNPGFQEPRA 291
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
+ ++ + ++H I +RD+K N+LLDD + ++SD G + + +T T
Sbjct: 292 IFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TK 347
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEE 558
GT G+ PE +Y D ++ GV L E++ + P E+ E
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----------------RIGRFSEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+++D + KV+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D + + + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 62 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY+ G + H+
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEP 162
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 163 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 215
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 216 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 334 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIEQFINEVV---ILSQINH 389
D + R LG+GGFG V+ M G + A K+ + + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 390 RHIVKLLGCCLETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
R IV L ET+ + LV ++ G + +HI++
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYN------------VDEDNPGFQEPRA 291
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
+ ++ + ++H I +RD+K N+LLDD + ++SD G + + +T T
Sbjct: 292 IFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TK 347
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT G+ PE +Y D ++ GV L E++ + P
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 22/230 (9%)
Query: 334 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIEQFINEVV---ILSQINH 389
D + R LG+GGFG V+ M G + A K+ + + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 390 RHIVKLLGCCLETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
R IV L ET+ + LV ++ G + +HI++
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYN------------VDEDNPGFQEPRA 291
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
+ ++ + ++H I +RD+K N+LLDD + ++SD G + + +T T
Sbjct: 292 IFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TK 347
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEE 558
GT G+ PE +Y D ++ GV L E++ + P E+ E
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----------------RIGRFXEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+++D + KV+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 90/224 (40%), Gaps = 24/224 (10%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKGMLPDGSIV----AVKRSRAIDKTQIEQFINEVVILSQ 386
R Y + RFLG+GGF Y+ D V V +S + Q E+ E+ I
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+++ H+V G + + +V E +L +H
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA------------- 128
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
R + + G V Y+H+ I HRD+K N+ L+D K+ DFG + + D
Sbjct: 129 -RYFMRQTIQG-VQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER- 182
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE ++ + D++S G +L LL GK P
Sbjct: 183 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 22/230 (9%)
Query: 334 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIEQFINEVV---ILSQINH 389
D + R LG+GGFG V+ M G + A K+ + + + +V IL++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 390 RHIVKLLGCCLETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
R IV L ET+ + LV ++ G + +HI++
Sbjct: 245 RFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYN------------VDEDNPGFQEPRA 291
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
+ ++ + ++H I +RD+K N+LLDD + ++SD G + + +T T
Sbjct: 292 IFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TK 347
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEE 558
GT G+ PE +Y D ++ GV L E++ + P E+ E
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D + + + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 34 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY+ G + H+
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFSEP 134
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 135 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 187
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 188 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 342 LGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCL 400
LG+G +G VY G L + +A+K D + E+ + + H++IV+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 401 ETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVA 460
E + E + G+LS + ++ +
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-------------QILEGLK 122
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSA--KVSDFGTSRSVPNDKTHLTTAVQGTFGYFD 518
Y+H I HRDIK N+L++ +S K+SDFGTS+ + T GT Y
Sbjct: 123 YLHDNQ---IVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMA 177
Query: 519 PEYFQSSQ--YTDKSDVYSFGVVLLELLTGKKPI 550
PE Y +D++S G ++E+ TGK P
Sbjct: 178 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 18/223 (8%)
Query: 334 DNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAID-KTQIEQFINEVVILSQINHRH 391
D+Y +G G V P VA+KR +T +++ + E+ +SQ +H +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 392 IVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
IV + + LV + +S G++ I +
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDII--------KHIVAKGEHKSGVLDESTIATI 126
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQ 511
EV + Y+H I HRD+K+ NILL + S +++DFG S + V+
Sbjct: 127 LREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 183
Query: 512 GTFG----YFDPEYF-QSSQYTDKSDVYSFGVVLLELLTGKKP 549
TF + PE Q Y K+D++SFG+ +EL TG P
Sbjct: 184 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 329 LQRATDNYNQSRFLGQGGFGTV----YKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVIL 384
LQ ++Y+ + +G+G FG V +K ++ + + I ++ F E I+
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 385 SQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXX 444
+ N +V+L + + +V EY+ G L + + ++
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF----------- 178
Query: 445 XXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKT 504
EV A+ +HS I HRD+K N+LLD K++DFGT + D+T
Sbjct: 179 ------YTAEVVLALDAIHSMGLI---HRDVKPDNMLLDKHGHLKLADFGTCMKM--DET 227
Query: 505 ---HLTTAVQGTFGYFDPEYFQS----SQYTDKSDVYSFGVVLLELLTGKKPI 550
H TAV GT Y PE +S Y + D +S GV L E+L G P
Sbjct: 228 GMVHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 90/224 (40%), Gaps = 24/224 (10%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKGMLPDGSIV----AVKRSRAIDKTQIEQFINEVVILSQ 386
R Y + RFLG+GGF Y+ D V V +S + Q E+ E+ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+++ H+V G + + +V E +L +H
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEA------------- 144
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
R + + G V Y+H+ I HRD+K N+ L+D K+ DFG + + D
Sbjct: 145 -RYFMRQTIQG-VQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER- 198
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE ++ + D++S G +L LL GK P
Sbjct: 199 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D + + + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 34 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY+ G + H+
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR----------------RIGRFXEP 134
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 135 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 187
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 188 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 18/223 (8%)
Query: 334 DNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAID-KTQIEQFINEVVILSQINHRH 391
D+Y +G G V P VA+KR +T +++ + E+ +SQ +H +
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 392 IVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
IV + + LV + +S G++ I +
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDII--------KHIVAKGEHKSGVLDESTIATI 121
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQ 511
EV + Y+H I HRD+K+ NILL + S +++DFG S + V+
Sbjct: 122 LREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 178
Query: 512 GTFG----YFDPEYF-QSSQYTDKSDVYSFGVVLLELLTGKKP 549
TF + PE Q Y K+D++SFG+ +EL TG P
Sbjct: 179 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 340 RFLGQGGFGTVYKGMLPDGSI---VAVKRSRAIDKTQIEQFI--NEVVILSQINHRHIVK 394
+ +G+G FG V + V V + +AI K + E+ I V+L + H +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 395 LLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV-AC 453
L + V +YI+ G L +H+ R R A
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP-----------------RARFYAA 146
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR-SVPNDKTHLTTAVQG 512
E+A A+ Y+HS + I +RD+K NILLD + ++DFG + ++ ++ T T+ G
Sbjct: 147 EIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCG 201
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T Y PE Y D + G VL E+L G P
Sbjct: 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y P S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D + + + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY G + H+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----------------RIGRFSEP 142
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+++D + KV+DFG ++ V
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR---- 195
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 21/220 (9%)
Query: 331 RATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIEQ--FINEVVILSQI 387
RA D Y +G G +G K DG I+ K T+ E+ ++EV +L ++
Sbjct: 4 RAED-YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 388 NHRHIVKLLGCCLETEVPVL--VYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXX 445
H +IV+ ++ L V EY G L+ I
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV--------- 113
Query: 446 XNRVRVACEVAGAVAYMH--SAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+RV ++ A+ H S + HRD+K +N+ LD K + K+ DFG +R + +D+
Sbjct: 114 ---LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE 170
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLEL 543
V GT Y PE Y +KSD++S G +L EL
Sbjct: 171 DFAKEFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAID---KTQIEQFINEVVILSQINHRHIVKLLGC 398
LG G FG VYK + S++A ++ ID + ++E ++ E+ IL+ +H +IVKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA--AKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 399 CLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC-EVAG 457
++ E+ + G + ++++V C +
Sbjct: 103 FYYENNLWILIEFCAGGAVD----------------AVMLELERPLTESQIQVVCKQTLD 146
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTS----RSVPNDKTHLTTAVQGT 513
A+ Y+H I HRD+K+ NIL K++DFG S R + + + GT
Sbjct: 147 ALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-----GT 198
Query: 514 FGYFDPEYF-----QSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ PE + Y K+DV+S G+ L+E+ + P
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + +IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----------------RIGRFSEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+++D + KV+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 122/303 (40%), Gaps = 48/303 (15%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFI--NEVVILSQI 387
++ + Y +G+G +G V K D G IVA+K+ D ++ + I E+ +L Q+
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H ++V LL C + + LV+E++ H I D
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFV-----DHTILDDLELFPNGLDYQVVQ--------- 127
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLT 507
+ ++ + + HS I HRDIK NIL+ K+ DFG +R++
Sbjct: 128 --KYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD 182
Query: 508 TAVQGTFGYFDPEYFQSS-QYTDKSDVYSFGVVLLELLTGKK--------------PICL 552
V T Y PE +Y DV++ G ++ E+ G+ +CL
Sbjct: 183 DEV-ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCL 241
Query: 553 ----TREEEERNLVAYFISLA-KENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSK 607
R +E N F + E K E L+ R K + E V +LA CL ++
Sbjct: 242 GNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLS-----EVVIDLAKKCLHIDPD 296
Query: 608 KRP 610
KRP
Sbjct: 297 KRP 299
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D + + R LG G FG V ML G+ A+K + + + QIE +NE I
Sbjct: 42 DQFERIRTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY G + H+
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR----------------RIGRFSEP 142
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + KV+DFG ++ V
Sbjct: 143 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR---- 195
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 196 TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAID---KTQIEQFINEVVILSQINHRHIVKLLGC 398
LG G FG VYK + S++A ++ ID + ++E ++ E+ IL+ +H +IVKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAA--AKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 399 CLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC-EVAG 457
++ E+ + G + ++++V C +
Sbjct: 103 FYYENNLWILIEFCAGGAVD----------------AVMLELERPLTESQIQVVCKQTLD 146
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYF 517
A+ Y+H I HRD+K+ NIL K++DFG S + GT +
Sbjct: 147 ALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWM 202
Query: 518 DPEYF-----QSSQYTDKSDVYSFGVVLLELLTGKKP 549
PE + Y K+DV+S G+ L+E+ + P
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 26/244 (10%)
Query: 313 SSCGSSEKAKIFTAEELQRATDN-YNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSR 367
S +E+ ++ A+ R T N + + LG+G FG V K ++ +K+
Sbjct: 126 SDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEV 185
Query: 368 AIDKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+ K ++ + E +L H + L + V EY + G L H+
Sbjct: 186 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL------ 239
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF 486
+R R E+ A+ Y+HS ++ +RD+K N++LD
Sbjct: 240 -----------SRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDG 286
Query: 487 SAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
K++DFG + D + T GT Y PE + + Y D + GVV+ E++ G
Sbjct: 287 HIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
Query: 547 KKPI 550
+ P
Sbjct: 346 RLPF 349
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK--RSRAIDKTQIEQFI-NEVVILSQINHR 390
NY + LG+G FG V G VA+K + + K+ ++ I E+ L + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
HI+KL + ++V EY N + + R
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-----------------R 117
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAV 510
++ AV Y H I HRD+K N+LLD+ + K++DFG S ++ D L T+
Sbjct: 118 FFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC 173
Query: 511 QGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKP 549
G+ Y PE Y + DV+S GV+L +L + P
Sbjct: 174 -GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 26/244 (10%)
Query: 313 SSCGSSEKAKIFTAEELQRATDN-YNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSR 367
S +E+ ++ A+ R T N + + LG+G FG V K ++ +K+
Sbjct: 129 SDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEV 188
Query: 368 AIDKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXX 427
+ K ++ + E +L H + L + V EY + G L H+
Sbjct: 189 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL------ 242
Query: 428 XXXXXXXXXXXXXXXXXXXNRVRV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF 486
+R R E+ A+ Y+HS ++ +RD+K N++LD
Sbjct: 243 -----------SRERVFSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDG 289
Query: 487 SAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
K++DFG + D + T GT Y PE + + Y D + GVV+ E++ G
Sbjct: 290 HIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 348
Query: 547 KKPI 550
+ P
Sbjct: 349 RLPF 352
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK--RSRAIDKTQIEQFI-NEVVILSQINHR 390
NY + LG+G FG V G VA+K + + K+ ++ I E+ L + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
HI+KL + ++V EY N + + R
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-----------------R 107
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAV 510
++ AV Y H I HRD+K N+LLD+ + K++DFG S ++ D L T+
Sbjct: 108 FFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC 163
Query: 511 QGTFGYFDPEYFQSSQYT-DKSDVYSFGVVLLELLTGKKP 549
G+ Y PE Y + DV+S GV+L +L + P
Sbjct: 164 -GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK--RSRAIDKTQIEQFI-NEVVILSQINHR 390
NY + LG+G FG V G VA+K + + K+ ++ I E+ L + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
HI+KL + ++V EY N + + R
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-----------------R 116
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAV 510
++ AV Y H I HRD+K N+LLD+ + K++DFG S ++ D L T+
Sbjct: 117 FFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC 172
Query: 511 QGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKP 549
G+ Y PE Y + DV+S GV+L +L + P
Sbjct: 173 -GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----------------RIGRFSEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+++D + +V+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 119/288 (41%), Gaps = 36/288 (12%)
Query: 297 EKLFKQNG-GYLLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGML 355
E L+ Q G +++ + + E K ++ LQ +++ R +G+G + V L
Sbjct: 18 ENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQ----DFDLLRVIGRGSYAKVLLVRL 73
Query: 356 PDG----SIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVL-VYE 410
++ VK+ D I+ E + Q ++ + L C +TE + V E
Sbjct: 74 KKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 133
Query: 411 YISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPI 470
Y++ G L H+ + E++ A+ Y+H I
Sbjct: 134 YVNGGDLMFHMQRQRKLPEEHARF----------------YSAEISLALNYLHERG---I 174
Query: 471 FHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTTAVQGTFGYFDPEYFQSSQYT 528
+RD+K N+LLD + K++D+G + P D T + GT Y PE + Y
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPEILRGEDYG 231
Query: 529 DKSDVYSFGVVLLELLTGKKP--ICLTREEEERNLVAYFISLAKENKL 574
D ++ GV++ E++ G+ P I + + ++N Y + E ++
Sbjct: 232 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 279
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK--RSRAIDKTQIEQFI-NEVVILSQINHR 390
NY + LG+G FG V G VA+K + + K+ ++ I E+ L + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
HI+KL + ++V EY N + + R
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-----------------R 111
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAV 510
++ AV Y H I HRD+K N+LLD+ + K++DFG S ++ D L T+
Sbjct: 112 FFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC 167
Query: 511 QGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKP 549
G+ Y PE Y + DV+S GV+L +L + P
Sbjct: 168 -GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 33/224 (14%)
Query: 334 DNYNQSRFLGQGGFGTVYKGML----PDGSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
D +++ + LG G FG V ML G+ A+K + + + QIE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+N +VKL + +V EY++ G + H+
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR----------------RIGRFSEP 141
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHL 506
+ A ++ Y+HS + + +RD+K N+L+D + +V+DFG ++ V
Sbjct: 142 HARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
T + GT PE S Y D ++ GV++ E+ G P
Sbjct: 195 TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ KL + +V EY G + H+ +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----------------RIGRFSEPHAR 145
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+++D + KV+DFG ++ V T
Sbjct: 146 FYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWX 198
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ KL + +V EY G + H+ +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----------------RIGRFSEPHAR 145
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+++D + KV+DFG ++ V T
Sbjct: 146 FYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWX 198
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + QIE +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ KL + +V EY G + H+ +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----------------RIGRFXEPHAR 145
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+++D + KV+DFG ++ V T
Sbjct: 146 FYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWX 198
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 199 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 342 LGQGGFGTVYKGMLP-DGSIVAVK-----RSRAIDKTQIEQFINEVVILSQINHRHIVKL 395
LG G FG V G G VAVK + R++D + + E+ L H HI+KL
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLD--VVGKIKREIQNLKLFRHPHIIKL 76
Query: 396 LGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
+V EY+S G L +I H R+ ++
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR----------------RLFQQI 120
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFG 515
AV Y H + HRD+K N+LLD +AK++DFG S ++ +D L T+ G+
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRTSC-GSPN 175
Query: 516 YFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKP 549
Y PE Y + D++S GV+L LL G P
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 345 GGFGTVYKGMLPDGSIVAVKRSRAID---KTQIEQFINEVVILSQINHRHIVKLLGCCLE 401
G FG VYK + S++A ++ ID + ++E ++ E+ IL+ +H +IVKLL
Sbjct: 21 GDFGKVYKAQNKETSVLAA--AKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 402 TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC-EVAGAVA 460
++ E+ + G + ++++V C + A+
Sbjct: 79 ENNLWILIEFCAGGAVD----------------AVMLELERPLTESQIQVVCKQTLDALN 122
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
Y+H I HRD+K+ NIL K++DFG S + GT + PE
Sbjct: 123 YLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPE 179
Query: 521 YF-----QSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y K+DV+S G+ L+E+ + P
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 96/230 (41%), Gaps = 23/230 (10%)
Query: 340 RFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQI--EQFINEVVILSQINHRHIVKLLG 397
R LG G FG V+ + V ++ D++Q+ EQ E+ +L ++H +I+K+
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 398 CCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAG 457
+ +V E G L I + ++
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERI------------VSAQARGKALSEGYVAELMKQMMN 135
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDD---KFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
A+AY HS + H+D+K NIL D K+ DFG + +D+ H T A GT
Sbjct: 136 ALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE-HSTNAA-GTA 190
Query: 515 GYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAY 564
Y PE F+ T K D++S GVV+ LLTG P T EE + Y
Sbjct: 191 LYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY 239
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 26/222 (11%)
Query: 334 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ L + V EY + G L H+ R
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----------------SRERVFTEERA 110
Query: 450 RV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
R E+ A+ Y+HS + +RDIK N++LD K++DFG + +D + T
Sbjct: 111 RFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 167
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE + + Y D + GVV+ E++ G+ P
Sbjct: 168 FC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 26/222 (11%)
Query: 334 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ L + V EY + G L H+ R
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----------------SRERVFTEERA 107
Query: 450 RV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
R E+ A+ Y+HS + +RDIK N++LD K++DFG + +D + T
Sbjct: 108 RFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE + + Y D + GVV+ E++ G+ P
Sbjct: 165 FC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+ YN LG+G FG V K + ++ + ++ A +K + EV +L +++H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDH 80
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+I+KL ++ +V E + G L I +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEI----------------IKRKRFSEHDAA 124
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF---SAKVSDFGTSRSVPNDKTHL 506
R+ +V + YMH I HRD+K NILL+ K K+ DFG S + T +
Sbjct: 125 RIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + + Y +K DV+S GV+L LL+G P
Sbjct: 181 KDRI-GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 26/222 (11%)
Query: 334 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ L + V EY + G L H+ R
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----------------SRERVFTEERA 107
Query: 450 RV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
R E+ A+ Y+HS + +RDIK N++LD K++DFG + +D + T
Sbjct: 108 RFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE + + Y D + GVV+ E++ G+ P
Sbjct: 165 FC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 31/249 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPDG----SIVAVKRSRAIDKTQIEQFINEVVILSQINHR 390
+++ R +G+G + V L ++ VK+ D I+ E + Q ++
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 391 HIVKLLGCCLETEVPVL-VYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ L C +TE + V EY++ G L H+
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF--------------- 125
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLT 507
+ E++ A+ Y+H I +RD+K N+LLD + K++D+G + P D T
Sbjct: 126 -YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--- 178
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP--ICLTREEEERNLVAYF 565
+ GT Y PE + Y D ++ GV++ E++ G+ P I + + ++N Y
Sbjct: 179 SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 238
Query: 566 ISLAKENKL 574
+ E ++
Sbjct: 239 FQVILEKQI 247
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 334 DNYNQSRFLGQGGFGTVYKG----MLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+ YN LG+G FG V K + ++ + ++ A +K + EV +L +++H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDH 80
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+I+KL ++ +V E + G L I +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEI----------------IKRKRFSEHDAA 124
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF---SAKVSDFGTSRSVPNDKTHL 506
R+ +V + YMH I HRD+K NILL+ K K+ DFG S + T +
Sbjct: 125 RIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + + Y +K DV+S GV+L LL+G P
Sbjct: 181 KDRI-GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 334 DNYNQSRFLGQGGFGTVYK----GMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
+ YN LG+G FG V K + ++ + ++ A +K + EV +L +++H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDH 80
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+I+KL ++ +V E + G L I +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEI----------------IKRKRFSEHDAA 124
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF---SAKVSDFGTSRSVPNDKTHL 506
R+ +V + YMH I HRD+K NILL+ K K+ DFG S + T +
Sbjct: 125 RIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKM 180
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ GT Y PE + + Y +K DV+S GV+L LL+G P
Sbjct: 181 KDRI-GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 92/227 (40%), Gaps = 32/227 (14%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDG-----SIVAVKRSRAIDKTQIEQFINEVVILSQ 386
TD Y LG+G F V + M +P G I+ K+ A D ++E+ E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARICRL 59
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +IV+L E LV++ ++ G L I
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI----------------VAREYYSEA 103
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDK---FSAKVSDFGTSRSVPNDK 503
+ ++ +V + H I HRD+K N+LL K + K++DFG + V D+
Sbjct: 104 DASHCIQQILESVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT GY PE + Y D+++ GV+L LL G P
Sbjct: 161 -QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 79
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 80 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 127
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 128 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 184
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 185 SXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 27/221 (12%)
Query: 334 DNYNQSRFLGQGGFGTVY-KGMLPDGSIVAVK---RSRAIDKTQIEQFINEVVILSQINH 389
D + + + LG G FG V + G+ A+K + + + +IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+VKL + +V EY G + H+ +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR----------------RIGRFSEPHAR 144
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
A ++ Y+HS + + +RD+K N+++D + +V+DFG ++ V T
Sbjct: 145 FYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWX 197
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE S Y D ++ GV++ E+ G P
Sbjct: 198 LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 32/228 (14%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDG-----SIVAVKRSRAIDKTQIEQFINEVVILSQ 386
TD Y LG+G F V + M +P G I+ K+ A D ++E+ E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARICRL 59
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +IV+L E LV++ ++ G L I
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI----------------VAREYYSEA 103
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDK---FSAKVSDFGTSRSVPNDK 503
+ ++ +V + H I HRD+K N+LL K + K++DFG + V D+
Sbjct: 104 DASHCIQQILESVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
GT GY PE + Y D+++ GV+L LL G P
Sbjct: 161 -QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFW 207
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 76
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 77 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 124
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 125 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 181
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 182 SXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 75
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 76 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 181 SXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 87
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 88 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 135
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 136 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 192
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 193 SXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 75
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 76 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 181 SXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPDG-------SIVAVKRSRAIDKTQI-EQFINEVVILS 385
+N+ + LG G +G V+ G ++ +K++ + K + E E +L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 386 QINHRHIVKLLGCCLETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXX 444
I + L +TE + L+ +YI+ G L H+
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL-----------------SQRERF 156
Query: 445 XXNRVRV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ V++ E+ A+ ++H + I +RDIK NILLD ++DFG S+ D+
Sbjct: 157 TEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 213
Query: 504 THLTTAVQGTFGYFDPEYFQ--SSQYTDKSDVYSFGVVLLELLTGKKPICLTREE 556
T GT Y P+ + S + D +S GV++ ELLTG P + E+
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK 268
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 94
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 95 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 142
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 143 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 199
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 200 SXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 42/226 (18%)
Query: 340 RFLGQGGFGTVYK----GMLPDGSIVAVKRSRAIDKTQIEQFINEVV-------ILSQIN 388
R LG+GG+G V++ G I A+K + K I + + IL ++
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMK---VLKKAMIVRNAKDTAHTKAERNILEEVK 79
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H IV L+ L+ EY+S G L +
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED------------------ 121
Query: 449 VRVAC----EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKT 504
AC E++ A+ ++H I +RD+K NI+L+ + K++DFG + +D T
Sbjct: 122 --TACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT 176
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+T GT Y PE S + D +S G ++ ++LTG P
Sbjct: 177 -VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 31/249 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPDG----SIVAVKRSRAIDKTQIEQFINEVVILSQINHR 390
+++ R +G+G + V L ++ VK+ D I+ E + Q ++
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 391 HIVKLLGCCLETEVPVL-VYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ L C +TE + V EY++ G L H+
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF--------------- 114
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLT 507
+ E++ A+ Y+H I +RD+K N+LLD + K++D+G + P D T
Sbjct: 115 -YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--- 167
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP--ICLTREEEERNLVAYF 565
+ GT Y PE + Y D ++ GV++ E++ G+ P I + + ++N Y
Sbjct: 168 SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227
Query: 566 ISLAKENKL 574
+ E ++
Sbjct: 228 FQVILEKQI 236
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 31/249 (12%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPDG----SIVAVKRSRAIDKTQIEQFINEVVILSQINHR 390
+++ R +G+G + V L ++ VK+ D I+ E + Q ++
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 391 HIVKLLGCCLETEVPVL-VYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ L C +TE + V EY++ G L H+
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF--------------- 110
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLT 507
+ E++ A+ Y+H I +RD+K N+LLD + K++D+G + P D T
Sbjct: 111 -YSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--- 163
Query: 508 TAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP--ICLTREEEERNLVAYF 565
+ GT Y PE + Y D ++ GV++ E++ G+ P I + + ++N Y
Sbjct: 164 SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 223
Query: 566 ISLAKENKL 574
+ E ++
Sbjct: 224 FQVILEKQI 232
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 98/239 (41%), Gaps = 40/239 (16%)
Query: 323 IFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRS-RAIDKTQIE-----Q 376
+F + ++ Y + + LG G +G V +L + V+R+ + I KT + +
Sbjct: 26 MFITSKKGHLSEMYQRVKKLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSK 82
Query: 377 FINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXX 436
+ EV +L ++H +I+KL + LV E G L I
Sbjct: 83 LLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI--------------- 127
Query: 437 XXXXXXXXXXNRVRVAC---EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKV 490
N V A +V V Y+H I HRD+K N+LL+ K K+
Sbjct: 128 ----IHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKI 180
Query: 491 SDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
DFG S N K GT Y PE + +Y +K DV+S GV+L LL G P
Sbjct: 181 VDFGLSAVFENQKK--MKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPP 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 83
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 84 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 131
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 132 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 188
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 189 SXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 87
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 88 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 135
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 136 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 192
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 193 SXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 42/226 (18%)
Query: 340 RFLGQGGFGTVYK----GMLPDGSIVAVKRSRAIDKTQIEQFINEVV-------ILSQIN 388
R LG+GG+G V++ G I A+K + K I + + IL ++
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMK---VLKKAMIVRNAKDTAHTKAERNILEEVK 79
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H IV L+ L+ EY+S G L +
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED------------------ 121
Query: 449 VRVAC----EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKT 504
AC E++ A+ ++H I +RD+K NI+L+ + K++DFG + +D T
Sbjct: 122 --TACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT 176
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+T GT Y PE S + D +S G ++ ++LTG P
Sbjct: 177 -VTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 109
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 110 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 157
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 158 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 215 SXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 75
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 76 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 181 SYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 88
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 89 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 136
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 137 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 193
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 194 SYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 90/227 (39%), Gaps = 32/227 (14%)
Query: 333 TDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQ 386
TD Y +G+G F V + G I+ K+ A D ++E+ E I
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLER---EARICRL 59
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +IV+L E LV++ ++ G L I
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDI----------------VAREYYSEA 103
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDK---FSAKVSDFGTSRSVPNDK 503
+ ++ AV + H + + HRD+K N+LL K + K++DFG + V D+
Sbjct: 104 DASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ 160
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT GY PE + Y D+++ GV+L LL G P
Sbjct: 161 -QAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ LS + D
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYL------ 111
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 112 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 163
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 164 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q + F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNRELQIMRKLDHCNI 75
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 76 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY 123
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 181 SXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ LS + D
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYL------ 112
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 113 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 164
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 165 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 113
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 114 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 161
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 162 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 218
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 219 SYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 103
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 104 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 151
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 152 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 208
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 209 SYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 28/242 (11%)
Query: 317 SSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTV----YKGMLPDGSIVAVKRSRAIDKT 372
S K I +L+ ++Y + +G+G FG V +K ++ + + I ++
Sbjct: 57 SRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRS 116
Query: 373 QIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
F E I++ N +V+L + +V EY+ G L + + ++
Sbjct: 117 DSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR 176
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
EV A+ +HS I HRD+K N+LLD K++D
Sbjct: 177 F-----------------YTAEVVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLAD 216
Query: 493 FGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQS----SQYTDKSDVYSFGVVLLELLTGKK 548
FGT + + GT Y PE +S Y + D +S GV L E+L G
Sbjct: 217 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 276
Query: 549 PI 550
P
Sbjct: 277 PF 278
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 100/241 (41%), Gaps = 33/241 (13%)
Query: 316 GSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE 375
G+ E + AE+++ D Y+ LG G F V + D + + I K +E
Sbjct: 3 GAVEGPRWKQAEDIR---DIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALE 57
Query: 376 ----QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXX 431
NE+ +L +I H +IV L L+ + +S G L I
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---------- 107
Query: 432 XXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNIL---LDDKFSA 488
+ R+ +V AV Y+H + I HRD+K N+L LD+
Sbjct: 108 ------VEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKI 158
Query: 489 KVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKK 548
+SDFG S+ + + + L+TA GT GY PE Y+ D +S GV+ LL G
Sbjct: 159 MISDFGLSK-MEDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 549 P 549
P
Sbjct: 217 P 217
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 28/242 (11%)
Query: 317 SSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTV----YKGMLPDGSIVAVKRSRAIDKT 372
S K I +L+ ++Y + +G+G FG V +K ++ + + I ++
Sbjct: 52 SRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRS 111
Query: 373 QIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
F E I++ N +V+L + +V EY+ G L + + ++
Sbjct: 112 DSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR 171
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
EV A+ +HS I HRD+K N+LLD K++D
Sbjct: 172 F-----------------YTAEVVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLAD 211
Query: 493 FGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQS----SQYTDKSDVYSFGVVLLELLTGKK 548
FGT + + GT Y PE +S Y + D +S GV L E+L G
Sbjct: 212 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 271
Query: 549 PI 550
P
Sbjct: 272 PF 273
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 80
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 81 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 128
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 129 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 185
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 186 SYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 109
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 110 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 157
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 158 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 215 SYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 111
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 112 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 159
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 160 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 216
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 217 SYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 28/242 (11%)
Query: 317 SSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTV----YKGMLPDGSIVAVKRSRAIDKT 372
S K I +L+ ++Y + +G+G FG V +K ++ + + I ++
Sbjct: 57 SRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRS 116
Query: 373 QIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXX 432
F E I++ N +V+L + +V EY+ G L + + ++
Sbjct: 117 DSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR 176
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
EV A+ +HS I HRD+K N+LLD K++D
Sbjct: 177 F-----------------YTAEVVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLAD 216
Query: 493 FGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQS----SQYTDKSDVYSFGVVLLELLTGKK 548
FGT + + GT Y PE +S Y + D +S GV L E+L G
Sbjct: 217 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 276
Query: 549 PI 550
P
Sbjct: 277 PF 278
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 100/241 (41%), Gaps = 33/241 (13%)
Query: 316 GSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE 375
G+ E + AE+++ D Y+ LG G F V + D + + I K +E
Sbjct: 3 GAVEGPRWKQAEDIR---DIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALE 57
Query: 376 ----QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXX 431
NE+ +L +I H +IV L L+ + +S G L I
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---------- 107
Query: 432 XXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNIL---LDDKFSA 488
+ R+ +V AV Y+H + I HRD+K N+L LD+
Sbjct: 108 ------VEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKI 158
Query: 489 KVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKK 548
+SDFG S+ + + + L+TA GT GY PE Y+ D +S GV+ LL G
Sbjct: 159 MISDFGLSK-MEDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 549 P 549
P
Sbjct: 217 P 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 100/242 (41%), Gaps = 33/242 (13%)
Query: 316 GSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE 375
G+ E + AE+++ D Y+ LG G F V + D + + I K +E
Sbjct: 3 GAVEGPRWKQAEDIR---DIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKKALE 57
Query: 376 ----QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXX 431
NE+ +L +I H +IV L L+ + +S G L I
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---------- 107
Query: 432 XXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNIL---LDDKFSA 488
+ R+ +V AV Y+H + I HRD+K N+L LD+
Sbjct: 108 ------VEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKI 158
Query: 489 KVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKK 548
+SDFG S+ + + + L+TA GT GY PE Y+ D +S GV+ LL G
Sbjct: 159 MISDFGLSK-MEDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 549 PI 550
P
Sbjct: 217 PF 218
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 36/226 (15%)
Query: 341 FLGQGGFGTVYKGM-LPDGSIVAVKRSRAI--DKTQIEQFINEVVILSQINHRHIVKLLG 397
+G G +G VYKG + G + A+K ++ +I+Q IN + S +HR+I G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS--HHRNIATYYG 88
Query: 398 CCLETEVP------VLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
++ P LV E+ G+++ I + +
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN---------------TKGNTLKEEWIAY 133
Query: 452 AC-EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAV 510
C E+ ++++H + HRDIK N+LL + K+ DFG S + T +
Sbjct: 134 ICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI 190
Query: 511 QGTFGYFDPEYFQSSQYTD-----KSDVYSFGVVLLELLTGKKPIC 551
GT + PE + D KSD++S G+ +E+ G P+C
Sbjct: 191 -GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC 235
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKTHLTTAV 510
++ AV++MH + + HRD+K N+L +D K+ DFG +R P D L T
Sbjct: 114 KLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170
Query: 511 QGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAK 570
T Y PE + Y + D++S GV+L +L+G+ P + +R+L S +
Sbjct: 171 -FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF----QSHDRSLTC--TSAVE 223
Query: 571 ENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTM 612
K ++ D EA + + +L G L ++ KR M
Sbjct: 224 IMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKM 265
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 75
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 76 VRLR------------YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 181 SXICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 26/222 (11%)
Query: 334 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ L + V EY + G L H+ R
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----------------SRERVFTEERA 107
Query: 450 RV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
R E+ A+ Y+HS + +RDIK N++LD K++DFG + +D +
Sbjct: 108 RFYGAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX 164
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE + + Y D + GVV+ E++ G+ P
Sbjct: 165 FC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 26/222 (11%)
Query: 334 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ L + V EY + G L H+ R
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----------------SRERVFTEERA 112
Query: 450 RV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
R E+ A+ Y+HS + +RDIK N++LD K++DFG + +D +
Sbjct: 113 RFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX 169
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE + + Y D + GVV+ E++ G+ P
Sbjct: 170 FC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q ++F N E+ I+ +++H +I
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNI 154
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 155 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 202
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 203 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 259
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 260 SYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 100/241 (41%), Gaps = 33/241 (13%)
Query: 316 GSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIE 375
G+ E + AE+++ D Y+ LG G F V + D + + I K +E
Sbjct: 3 GAVEGPRWKQAEDIR---DIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALE 57
Query: 376 ----QFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXX 431
NE+ +L +I H +IV L L+ + +S G L I
Sbjct: 58 GKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI---------- 107
Query: 432 XXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNIL---LDDKFSA 488
+ R+ +V AV Y+H + I HRD+K N+L LD+
Sbjct: 108 ------VEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKI 158
Query: 489 KVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKK 548
+SDFG S+ + + + L+TA GT GY PE Y+ D +S GV+ LL G
Sbjct: 159 MISDFGLSK-MEDPGSVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 549 P 549
P
Sbjct: 217 P 217
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 92/215 (42%), Gaps = 30/215 (13%)
Query: 342 LGQGGFGTVYKGMLP-DGSIVAVK-----RSRAIDKTQIEQFINEVVILSQINHRHIVKL 395
LG G FG V G G VAVK + R++D + + E+ L H HI+KL
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLD--VVGKIKREIQNLKLFRHPHIIKL 76
Query: 396 LGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
+V EY+S G L +I H R+ ++
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR----------------RLFQQI 120
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFG 515
AV Y H + HRD+K N+LLD +AK++DFG S ++ +D L + G+
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRDSC-GSPN 175
Query: 516 YFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKP 549
Y PE Y + D++S GV+L LL G P
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 26/222 (11%)
Query: 334 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ L + V EY + G L H+ R
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----------------SRERVFTEERA 107
Query: 450 RV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
R E+ A+ Y+HS + +RDIK N++LD K++DFG + +D +
Sbjct: 108 RFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX 164
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE + + Y D + GVV+ E++ G+ P
Sbjct: 165 FC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 93/228 (40%), Gaps = 37/228 (16%)
Query: 342 LGQGGFGTVY--KGMLPDGSIVA---VKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG G F V+ K L G + A +K+S A + +E NE+ +L +I H +IV L
Sbjct: 17 LGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLE---NEIAVLKKIKHENIVTLE 72
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
T LV + +S G L I + + V +V
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEK----------------DASLVIQQVL 116
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
AV Y+H I HRD+K N+L ++ ++DFG S+ N + + GT
Sbjct: 117 SAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGT 170
Query: 514 FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNL 561
GY PE Y+ D +S GV+ LL G P EE E L
Sbjct: 171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF---YEETESKL 215
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q + F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNRELQIMRKLDHCNI 75
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 76 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 181 SYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E H+H
Sbjct: 62 NIVKLLDVIHTENKLYLVFE---------HVHQDLKTFMDASALTGIPLPLIKSYL---- 108
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 109 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE 162
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 163 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 26/222 (11%)
Query: 334 DNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINH 389
++++ + LG+G FG V K ++ +++ I K ++ + E +L H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
+ L + V EY + G L H+ R
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----------------SRERVFTEERA 107
Query: 450 RV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
R E+ A+ Y+HS + +RDIK N++LD K++DFG + +D +
Sbjct: 108 RFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX 164
Query: 509 AVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y PE + + Y D + GVV+ E++ G+ P
Sbjct: 165 FC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 335 NYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHI 392
+Y ++ +G G FG VY+ L D G +VA+K+ Q + F N E+ I+ +++H +I
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNRELQIMRKLDHCNI 75
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIH-----DHXXXXXXXXXXXXXXXXXXXXXXN 447
V+L Y + S+G ++ D+
Sbjct: 76 VRLR------------YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHL 506
++ ++AY+HS I HRDIK N+LLD D K+ DFG+++ + + ++
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 507 TTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+ Y PE F ++ YT DV+S G VL ELL G+
Sbjct: 181 SYICSRY--YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 342 LGQGGFGTV-----YKGMLPDGSIVAVK--RSRAIDKTQIEQFI-NEVVILSQINHRHIV 393
LG+G FG V YK VA+K + + K+ + + E+ L + H HI+
Sbjct: 17 LGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC 453
KL V+V EY + G L +I + R
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR----------------RFFQ 115
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ A+ Y H I HRD+K N+LLDD + K++DFG S ++ D L T+ G+
Sbjct: 116 QIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKTSC-GS 170
Query: 514 FGYFDPEYFQSSQYT-DKSDVYSFGVVLLELLTGKKP 549
Y PE Y + DV+S G+VL +L G+ P
Sbjct: 171 PNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 119/302 (39%), Gaps = 44/302 (14%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQIEQF-----INEVVILS 385
AT Y +G G +GTVYK P G VA+K R + + EV +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 386 QIN---HRHIVKLLGCC----LETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXX 437
++ H ++V+L+ C + E+ V LV+E++ ++
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTY------------LDKAPP 114
Query: 438 XXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR 497
+ +R + + ++H+ I HRD+K NIL+ + K++DFG +R
Sbjct: 115 PGLPAETIKDLMR---QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 168
Query: 498 SVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEE 557
+ + + LT V T Y PE S Y D++S G + E+ K C E +
Sbjct: 169 -IYSYQMALTPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226
Query: 558 ERNLVAYFISLAKENKLLEILD----------ARVAKEAREEDIEAVAELAMGCLRLNSK 607
+ + I L E+ + R + E E+ A+L + L N
Sbjct: 227 QLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPH 286
Query: 608 KR 609
KR
Sbjct: 287 KR 288
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 30/184 (16%)
Query: 380 EVVILSQI-NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXX 438
E IL Q+ H HI+ L+ + LV++ + G L ++ +
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRS---- 204
Query: 439 XXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
+ + AV+++H+ I HRD+K NILLDD ++SDFG S
Sbjct: 205 ------------IMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCH 249
Query: 499 V-PNDKTHLTTAVQGTFGYFDPEYFQSSQ------YTDKSDVYSFGVVLLELLTGKKPIC 551
+ P +K + GT GY PE + S Y + D+++ GV+L LL G P
Sbjct: 250 LEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFW 306
Query: 552 LTRE 555
R+
Sbjct: 307 HRRQ 310
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ L + D
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYL------ 109
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 110 ----FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYX 161
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 162 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 31/228 (13%)
Query: 326 AEELQRATDNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFIN----- 379
A +++ Y + FLG+G F TVYK + IVA+K+ + +++ + IN
Sbjct: 2 ALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
E+ +L +++H +I+ LL LV++++ L I D+
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHI------ 114
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV 499
+ + + G + Y+H I HRD+K +N+LLD+ K++DFG ++S
Sbjct: 115 --------KAYMLMTLQG-LEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF 162
Query: 500 --PNDKTHLTTAVQGTFGYFDPE-YFQSSQYTDKSDVYSFGVVLLELL 544
PN + + V T Y PE F + Y D+++ G +L ELL
Sbjct: 163 GSPN-RAYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 92/229 (40%), Gaps = 32/229 (13%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKGMLPD------GSIVAVKRSRAIDKTQIEQFINEVVIL 384
R TD+Y LG+G F V + + I+ K+ A D ++E+ E I
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER---EARIC 84
Query: 385 SQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXX 444
+ H +IV+L E LV++ ++ G L I
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI----------------VAREYYS 128
Query: 445 XXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDK---FSAKVSDFGTSRSVPN 501
+ ++ +V ++H I HRD+K N+LL K + K++DFG + V
Sbjct: 129 EADASHCIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 185
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
++ GT GY PE + Y D+++ GV+L LL G P
Sbjct: 186 EQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 92/234 (39%), Gaps = 39/234 (16%)
Query: 329 LQRATDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVIL 384
Q +D Y + + LG G +G V K + +I +K+S + ++EV +L
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 385 SQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXX 444
Q++H +I+KL + LV E G L I
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI----------------ILRQKFS 119
Query: 445 XXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPN 501
+ + +V Y+H I HRD+K N+LL+ K K+ DFG S
Sbjct: 120 EVDAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS----- 171
Query: 502 DKTHLTTAVQ-----GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
H + GT Y PE + +Y +K DV+S GV+L LL G P
Sbjct: 172 --AHFEVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 24/213 (11%)
Query: 341 FLGQGGFGTVYKGMLPDGSIV----AVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
FLG+GGF ++ D V V +S + Q E+ E+ I + H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
G + + +V E +L +H ++ + C+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYL---------RQIVLGCQ-- 131
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGY 516
Y+H I HRD+K N+ L++ K+ DFG + V D T + GT Y
Sbjct: 132 ----YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNY 183
Query: 517 FDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
PE ++ + DV+S G ++ LL GK P
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 24/213 (11%)
Query: 341 FLGQGGFGTVYKGMLPDGSIV----AVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
FLG+GGF ++ D V V +S + Q E+ E+ I + H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
G + + +V E +L +H ++ + C+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYL---------RQIVLGCQ-- 131
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGY 516
Y+H I HRD+K N+ L++ K+ DFG + V D T + GT Y
Sbjct: 132 ----YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNY 183
Query: 517 FDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
PE ++ + DV+S G ++ LL GK P
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E++S D
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDL--KKFMDASALTGIPLPLIKSYL--------- 110
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 111 ----FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYX 162
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 163 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E++S D
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDL--KKFMDASALTGIPLPLIKSYL--------- 112
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 113 ----FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYX 164
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 165 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 24/213 (11%)
Query: 341 FLGQGGFGTVYKGMLPDGSIV----AVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
FLG+GGF ++ D V V +S + Q E+ E+ I + H+H+V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
G + + +V E +L +H ++ + C+
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYL---------RQIVLGCQ-- 135
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGY 516
Y+H I HRD+K N+ L++ K+ DFG + V D T + GT Y
Sbjct: 136 ----YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNY 187
Query: 517 FDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
PE ++ + DV+S G ++ LL GK P
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 26/228 (11%)
Query: 329 LQRATDN-YNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVI 383
+ R T N + + LG+G FG V K ++ +K+ + K ++ + E +
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 384 LSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
L H + L + V EY + G L H+
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----------------SRERV 105
Query: 444 XXXNRVRV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+R R E+ A+ Y+HS ++ +RD+K N++LD K++DFG + D
Sbjct: 106 FSEDRARFYGAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 163
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE + + Y D + GVV+ E++ G+ P
Sbjct: 164 GATMKXFC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 115/299 (38%), Gaps = 41/299 (13%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQIEQF--INEVVILSQIN 388
AT Y +G G +GTVYK P G VA+K R + + + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 389 ---HRHIVKLLGCC----LETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXX 440
H ++V+L+ C + E+ V LV+E++ ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTY------------LDKAPPPGL 109
Query: 441 XXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP 500
+ +R + + ++H+ I HRD+K NIL+ + K++DFG +R
Sbjct: 110 PAETIKDLMR---QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
Query: 501 NDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERN 560
V T Y PE S Y D++S G + E+ K C E ++
Sbjct: 164 YQMALFPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG 221
Query: 561 LVAYFISLAKENKLLEILD----------ARVAKEAREEDIEAVAELAMGCLRLNSKKR 609
+ I L E+ + R + E E+ A+L + L N KR
Sbjct: 222 KIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKR 280
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 89/215 (41%), Gaps = 30/215 (13%)
Query: 342 LGQGGFGTVYKGMLP-DGSIVAVK-----RSRAIDKTQIEQFINEVVILSQINHRHIVKL 395
LG G FG V G G VAVK + R++D + + E+ L H HI+KL
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLD--VVGKIRREIQNLKLFRHPHIIKL 81
Query: 396 LGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
+V EY+S G L +I R+ ++
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI----------------CKNGRLDEKESRRLFQQI 125
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFG 515
V Y H + HRD+K N+LLD +AK++DFG S + +D L + G+
Sbjct: 126 LSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRXSC-GSPN 180
Query: 516 YFDPEYFQSSQYT-DKSDVYSFGVVLLELLTGKKP 549
Y PE Y + D++S GV+L LL G P
Sbjct: 181 YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRS-RAIDKTQIEQF-INEVVILSQINHR 390
+ Y + +G+G +G V+K D G IVA+K+ + D I++ + E+ +L Q+ H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
++V LL LV+EY + T+ H + +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKS--------------- 106
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAV 510
+ + AV + H I HRD+K NIL+ K+ DFG +R + + V
Sbjct: 107 ITWQTLQAVNFCHKHNCI---HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV 163
Query: 511 QGTFGYFDPEYF-QSSQYTDKSDVYSFGVVLLELLTG 546
T Y PE +QY DV++ G V ELL+G
Sbjct: 164 -ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 105/248 (42%), Gaps = 31/248 (12%)
Query: 313 SSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGT---VYKGML-PDGSIVAVKR-SR 367
S GSS K + QR N LG+ G GT V+K G ++AVK+ R
Sbjct: 1 GSSGSSGKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRR 60
Query: 368 AIDKTQIEQFINEV-VILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXX 426
+ +K + ++ + ++ V+L + +IV+ G + + E + GT + +
Sbjct: 61 SGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQ 118
Query: 427 XXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF 486
R+ VA A + + HRD+K SNILLD++
Sbjct: 119 GPIP----------------ERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG 162
Query: 487 SAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQ-----SSQYTDKSDVYSFGVVLL 541
K+ DFG S + +DK +A G Y PE Y ++DV+S G+ L+
Sbjct: 163 QIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLV 220
Query: 542 ELLTGKKP 549
EL TG+ P
Sbjct: 221 ELATGQFP 228
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 133/331 (40%), Gaps = 77/331 (23%)
Query: 307 LLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK- 364
L R + C K+ +E + Y LG GGFG+VY G+ + D VA+K
Sbjct: 9 LAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH 68
Query: 365 --RSRAIDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL- 407
+ R D ++ + EVV+L +++ +++LL LE PV
Sbjct: 69 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 128
Query: 408 VYEYISN-GTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
++++I+ G L + +V AV + H+
Sbjct: 129 LFDFITERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG 162
Query: 467 SIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSS 525
+ HRDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ +
Sbjct: 163 ---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 216
Query: 526 QYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAK 584
+Y +S V+S G++L +++ G P E + ++ + + RV+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQ----------RVSS 261
Query: 585 EAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
E + L CL L RPT +++
Sbjct: 262 ECQ--------HLIRWCLALRPSDRPTFEEI 284
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 133/331 (40%), Gaps = 77/331 (23%)
Query: 307 LLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK- 364
L R + C K+ +E + Y LG GGFG+VY G+ + D VA+K
Sbjct: 9 LAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH 68
Query: 365 --RSRAIDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL- 407
+ R D ++ + EVV+L +++ +++LL LE PV
Sbjct: 69 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 128
Query: 408 VYEYIS-NGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
++++I+ G L + +V AV + H+
Sbjct: 129 LFDFITERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG 162
Query: 467 SIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSS 525
+ HRDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ +
Sbjct: 163 ---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 216
Query: 526 QYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAK 584
+Y +S V+S G++L +++ G P E + ++ + + RV+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQ----------RVSS 261
Query: 585 EAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
E + L CL L RPT +++
Sbjct: 262 ECQ--------HLIRWCLALRPSDRPTFEEI 284
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 133/331 (40%), Gaps = 77/331 (23%)
Query: 307 LLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK- 364
L R + C K+ +E + Y LG GGFG+VY G+ + D VA+K
Sbjct: 9 LAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH 68
Query: 365 --RSRAIDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL- 407
+ R D ++ + EVV+L +++ +++LL LE PV
Sbjct: 69 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 128
Query: 408 VYEYIS-NGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
++++I+ G L + +V AV + H+
Sbjct: 129 LFDFITERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG 162
Query: 467 SIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSS 525
+ HRDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ +
Sbjct: 163 ---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 216
Query: 526 QYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAK 584
+Y +S V+S G++L +++ G P E + ++ + + RV+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQ----------RVSX 261
Query: 585 EAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
E + L CL L RPT +++
Sbjct: 262 ECQ--------HLIRWCLALRPSDRPTFEEI 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 133/331 (40%), Gaps = 77/331 (23%)
Query: 307 LLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK- 364
L R + C K+ +E + Y LG GGFG+VY G+ + D VA+K
Sbjct: 10 LAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH 69
Query: 365 --RSRAIDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL- 407
+ R D ++ + EVV+L +++ +++LL LE PV
Sbjct: 70 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 129
Query: 408 VYEYISN-GTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
++++I+ G L + +V AV + H+
Sbjct: 130 LFDFITERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG 163
Query: 467 SIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSS 525
+ HRDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ +
Sbjct: 164 ---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 217
Query: 526 QYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAK 584
+Y +S V+S G++L +++ G P E + ++ + + RV+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQ----------RVSX 262
Query: 585 EAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
E + L CL L RPT +++
Sbjct: 263 ECQ--------HLIRWCLALRPSDRPTFEEI 285
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 109
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 110 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 161
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 162 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 133/331 (40%), Gaps = 77/331 (23%)
Query: 307 LLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK- 364
L R + C K+ +E + Y LG GGFG+VY G+ + D VA+K
Sbjct: 10 LAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH 69
Query: 365 --RSRAIDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL- 407
+ R D ++ + EVV+L +++ +++LL LE PV
Sbjct: 70 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 129
Query: 408 VYEYISN-GTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
++++I+ G L + +V AV + H+
Sbjct: 130 LFDFITERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG 163
Query: 467 SIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSS 525
+ HRDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ +
Sbjct: 164 ---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 217
Query: 526 QYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAK 584
+Y +S V+S G++L +++ G P E + ++ + + RV+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQ----------RVSS 262
Query: 585 EAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
E + L CL L RPT +++
Sbjct: 263 ECQ--------HLIRWCLALRPSDRPTFEEI 285
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 116
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 117 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE 170
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 171 VV--TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 133/331 (40%), Gaps = 77/331 (23%)
Query: 307 LLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK- 364
L R + C K+ +E + Y LG GGFG+VY G+ + D VA+K
Sbjct: 10 LAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH 69
Query: 365 --RSRAIDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL- 407
+ R D ++ + EVV+L +++ +++LL LE PV
Sbjct: 70 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 129
Query: 408 VYEYISN-GTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
++++I+ G L + +V AV + H+
Sbjct: 130 LFDFITERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG 163
Query: 467 SIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSS 525
+ HRDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ +
Sbjct: 164 ---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 217
Query: 526 QYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAK 584
+Y +S V+S G++L +++ G P E + ++ + + RV+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQ----------RVSS 262
Query: 585 EAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
E + L CL L RPT +++
Sbjct: 263 ECQ--------HLIRWCLALRPSDRPTFEEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 133/331 (40%), Gaps = 77/331 (23%)
Query: 307 LLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK- 364
L R + C K+ +E + Y LG GGFG+VY G+ + D VA+K
Sbjct: 10 LAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH 69
Query: 365 --RSRAIDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL- 407
+ R D ++ + EVV+L +++ +++LL LE PV
Sbjct: 70 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 129
Query: 408 VYEYIS-NGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
++++I+ G L + +V AV + H+
Sbjct: 130 LFDFITERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG 163
Query: 467 SIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSS 525
+ HRDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ +
Sbjct: 164 ---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 217
Query: 526 QYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAK 584
+Y +S V+S G++L +++ G P E + ++ + + RV+
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQ----------RVSX 262
Query: 585 EAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
E + L CL L RPT +++
Sbjct: 263 ECQ--------HLIRWCLALRPSDRPTFEEI 285
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 110
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 111 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 162
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 163 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 112
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 113 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 164
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 165 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 111
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 112 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 163
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 164 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 132/331 (39%), Gaps = 77/331 (23%)
Query: 307 LLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK- 364
L R + C K+ +E + Y LG GGFG+VY G+ + D VA+K
Sbjct: 24 LAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH 83
Query: 365 --RSRAIDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL- 407
+ R D ++ + EVV+L +++ +++LL LE PV
Sbjct: 84 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 143
Query: 408 VYEYISN-GTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
++++I+ G L + +V AV + H+
Sbjct: 144 LFDFITERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG 177
Query: 467 SIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSS 525
+ HRDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ +
Sbjct: 178 ---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 231
Query: 526 QYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAK 584
+Y +S V+S G++L +++ G P +EE +F RV+
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQVFF-------------RQRVSS 276
Query: 585 EAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
E + L CL L RPT +++
Sbjct: 277 ECQ--------HLIRWCLALRPSDRPTFEEI 299
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKTFMDASALTGIPLPLIKSYL-- 112
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 113 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 164
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 165 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 112
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 113 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 164
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 165 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 111
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 112 ----FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYX 163
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 164 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 109
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 110 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE 163
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 164 VV--TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 113
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 114 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 165
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 166 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 110
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 111 ----FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYX 162
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 163 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 132/331 (39%), Gaps = 77/331 (23%)
Query: 307 LLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK- 364
L R + C K+ +E + Y LG GGFG+VY G+ + D VA+K
Sbjct: 24 LAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH 83
Query: 365 --RSRAIDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL- 407
+ R D ++ + EVV+L +++ +++LL LE PV
Sbjct: 84 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 143
Query: 408 VYEYIS-NGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
++++I+ G L + +V AV + H+
Sbjct: 144 LFDFITERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG 177
Query: 467 SIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSS 525
+ HRDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ +
Sbjct: 178 ---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 231
Query: 526 QYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAK 584
+Y +S V+S G++L +++ G P +EE +F RV+
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQVFF-------------RQRVSX 276
Query: 585 EAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
E + L CL L RPT +++
Sbjct: 277 ECQ--------HLIRWCLALRPSDRPTFEEI 299
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 111
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 112 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 163
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 164 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 132/331 (39%), Gaps = 77/331 (23%)
Query: 307 LLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK- 364
L R + C K+ +E + Y LG GGFG+VY G+ + D VA+K
Sbjct: 9 LAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH 68
Query: 365 --RSRAIDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL- 407
+ R D ++ + EVV+L +++ +++LL LE PV
Sbjct: 69 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 128
Query: 408 VYEYIS-NGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
++++I+ G L + +V AV + H+
Sbjct: 129 LFDFITERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG 162
Query: 467 SIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSS 525
+ HRDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ +
Sbjct: 163 ---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 216
Query: 526 QYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAK 584
+Y +S V+S G++L +++ G P +EE +F RV+
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQVFF-------------RQRVSS 261
Query: 585 EAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
E + L CL L RPT +++
Sbjct: 262 ECQ--------HLIRWCLALRPSDRPTFEEI 284
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 109
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 110 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 161
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 162 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 109
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 110 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 161
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 162 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 24/213 (11%)
Query: 341 FLGQGGFGTVYKGMLPDGSIV----AVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
FLG+GGF ++ D V V +S + Q E+ E+ I + H+H+V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
G + + +V E +L +H ++ + C+
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYL---------RQIVLGCQ-- 129
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGY 516
Y+H I HRD+K N+ L++ K+ DFG + V D + GT Y
Sbjct: 130 ----YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNY 181
Query: 517 FDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
PE ++ + DV+S G ++ LL GK P
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 109
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 110 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 161
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 162 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 26/226 (11%)
Query: 331 RATDN-YNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILS 385
R T N + + LG+G FG V K ++ +K+ + K ++ + E +L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 386 QINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXX 445
H + L + V EY + G L H+
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----------------SRERVFS 106
Query: 446 XNRVRV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKT 504
+R R E+ A+ Y+HS ++ +RD+K N++LD K++DFG + D
Sbjct: 107 EDRARFYGAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 164
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE + + Y D + GVV+ E++ G+ P
Sbjct: 165 TMKXFC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 108
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 109 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 162
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 163 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 26/226 (11%)
Query: 331 RATDN-YNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILS 385
R T N + + LG+G FG V K ++ +K+ + K ++ + E +L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 386 QINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXX 445
H + L + V EY + G L H+
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----------------SRERVFS 108
Query: 446 XNRVRV-ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKT 504
+R R E+ A+ Y+HS ++ +RD+K N++LD K++DFG + D
Sbjct: 109 EDRARFYGAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 166
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE + + Y D + GVV+ E++ G+ P
Sbjct: 167 TMKXFC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 132/331 (39%), Gaps = 77/331 (23%)
Query: 307 LLQQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK- 364
L R + C K+ +E + Y LG GGFG+VY G+ + D VA+K
Sbjct: 29 LAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH 88
Query: 365 --RSRAIDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL- 407
+ R D ++ + EVV+L +++ +++LL LE PV
Sbjct: 89 VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD 148
Query: 408 VYEYIS-NGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
++++I+ G L + +V AV + H+
Sbjct: 149 LFDFITERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG 182
Query: 467 SIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSS 525
+ HRDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ +
Sbjct: 183 ---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYH 236
Query: 526 QYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAK 584
+Y +S V+S G++L +++ G P +EE +F RV+
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQVFF-------------RQRVSX 281
Query: 585 EAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
E + L CL L RPT +++
Sbjct: 282 ECQ--------HLIRWCLALRPSDRPTFEEI 304
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 119/299 (39%), Gaps = 41/299 (13%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQIEQF--INEVVILSQIN 388
AT Y +G G +GTVYK P G VA+K R + + + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 389 ---HRHIVKLLGCC----LETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXX 440
H ++V+L+ C + E+ V LV+E++ ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTY------------LDKAPPPGL 109
Query: 441 XXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP 500
+ +R + + ++H+ I HRD+K NIL+ + K++DFG +R +
Sbjct: 110 PAETIKDLMR---QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IY 162
Query: 501 NDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERN 560
+ + L V T Y PE S Y D++S G + E+ K C E ++
Sbjct: 163 SYQMALAPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG 221
Query: 561 LVAYFISLAKENKLLEILD----------ARVAKEAREEDIEAVAELAMGCLRLNSKKR 609
+ I L E+ + R + E E+ A+L + L N KR
Sbjct: 222 KIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKR 280
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 24/213 (11%)
Query: 341 FLGQGGFGTVYKGMLPDGSIV----AVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
FLG+GGF ++ D V V +S + Q E+ E+ I + H+H+V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
G + + +V E +L +H ++ + C+
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYL---------RQIVLGCQ-- 153
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGY 516
Y+H I HRD+K N+ L++ K+ DFG + V D + GT Y
Sbjct: 154 ----YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNY 205
Query: 517 FDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
PE ++ + DV+S G ++ LL GK P
Sbjct: 206 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E+ +H
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL-- 110
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 111 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYT 162
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 163 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 24/213 (11%)
Query: 341 FLGQGGFGTVYKGMLPDGSIV----AVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
FLG+GGF ++ D V V +S + Q E+ E+ I + H+H+V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
G + + +V E +L +H ++ + C+
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYL---------RQIVLGCQ-- 155
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGY 516
Y+H I HRD+K N+ L++ K+ DFG + V D + GT Y
Sbjct: 156 ----YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNY 207
Query: 517 FDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
PE ++ + DV+S G ++ LL GK P
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 109
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 110 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE 163
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 164 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 108
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 109 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE 162
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 163 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 108
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 109 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 162
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 163 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSR--AIDKTQIEQFINEVVILSQINHRH 391
+ Y+ +G+G +G VYK G A+K+ R D+ I E+ IL ++ H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 392 IVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
IVKL + VLV+E++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDL----------------KKLLDVCEGGLESVTAKSF 105
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDK-THLTT 508
++ +AY H + HRD+K N+L++ + K++DFG +R+ +P K TH
Sbjct: 106 LLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV 162
Query: 509 AVQGTFGYFDPEYFQ-SSQYTDKSDVYSFGVVLLELLTG 546
T Y P+ S +Y+ D++S G + E++ G
Sbjct: 163 ----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 110
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 111 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHE 164
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 165 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 116
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 117 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE 170
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 171 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 108
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 109 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE 162
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 163 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 109
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 110 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE 163
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 164 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSR--AIDKTQIEQFINEVVILSQINHRH 391
+ Y+ +G+G +G VYK G A+K+ R D+ I E+ IL ++ H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 392 IVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
IVKL + VLV+E++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDL----------------KKLLDVCEGGLESVTAKSF 105
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDK-THLTT 508
++ +AY H + HRD+K N+L++ + K++DFG +R+ +P K TH
Sbjct: 106 LLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV 162
Query: 509 AVQGTFGYFDPEYFQ-SSQYTDKSDVYSFGVVLLELLTG 546
T Y P+ S +Y+ D++S G + E++ G
Sbjct: 163 ----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 113
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 114 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE 167
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 168 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 119/299 (39%), Gaps = 41/299 (13%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQIEQF--INEVVILSQIN 388
AT Y +G G +GTVYK P G VA+K R + + + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 389 ---HRHIVKLLGCC----LETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXX 440
H ++V+L+ C + E+ V LV+E++ ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTY------------LDKAPPPGL 109
Query: 441 XXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVP 500
+ +R + + ++H+ I HRD+K NIL+ + K++DFG +R +
Sbjct: 110 PAETIKDLMR---QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IY 162
Query: 501 NDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERN 560
+ + L V T Y PE S Y D++S G + E+ K C E ++
Sbjct: 163 SYQMALDPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG 221
Query: 561 LVAYFISLAKENKLLEILD----------ARVAKEAREEDIEAVAELAMGCLRLNSKKR 609
+ I L E+ + R + E E+ A+L + L N KR
Sbjct: 222 KIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKR 280
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ +N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +IVKLL LV+E++ D
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDL--KKFMDASALTGIPLPLIKSYL--------- 112
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHL 506
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 113 ----FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYX 164
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 165 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 342 LGQGGFGTVYKGM--LPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQINHRHIVKLLGC 398
LG+G + TVYKG L D ++VA+K R + I EV +L + H +IV L
Sbjct: 10 LGEGTYATVYKGKSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 399 CLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGA 458
+ LV+EY+ + L ++ D N ++
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDD---------------CGNIINMHNVKLFLFQLLRG 112
Query: 459 VAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR--SVPNDKTHLTTAVQGTFGY 516
+AY H + HRD+K N+L++++ K++DFG +R S+P KT+ V T Y
Sbjct: 113 LAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KTYDNEVV--TLWY 166
Query: 517 FDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
P+ S+ Y+ + D++ G + E+ TG+
Sbjct: 167 RPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSR--AIDKTQIEQFINEVVILSQINHRH 391
+ Y+ +G+G +G VYK G A+K+ R D+ I E+ IL ++ H +
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 392 IVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
IVKL + VLV+E++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDL----------------KKLLDVCEGGLESVTAKSF 105
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDK-THLTT 508
++ +AY H + HRD+K N+L++ + K++DFG +R+ +P K TH
Sbjct: 106 LLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV 162
Query: 509 AVQGTFGYFDPEYFQ-SSQYTDKSDVYSFGVVLLELLTG 546
T Y P+ S +Y+ D++S G + E++ G
Sbjct: 163 ----TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 101/245 (41%), Gaps = 31/245 (12%)
Query: 326 AEELQRATDNYNQSRFLGQGGFGTV---------YKGMLPDGSIVAVKRS-------RAI 369
+E + ++Y R L QG F + Y + S++ KR +
Sbjct: 23 VKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKIS 82
Query: 370 DKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXX 429
K++ + F NE+ I++ I + + + G + ++YEY+ N ++ D
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF--DEYFFVL 140
Query: 430 XXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAK 489
+ V + +Y+H+ +I HRD+K SNIL+D K
Sbjct: 141 DKNYTCFIPIQVIKC------IIKSVLNSFSYIHNEKNIC--HRDVKPSNILMDKNGRVK 192
Query: 490 VSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYF--QSSQYTDKSDVYSFGVVLLELLTGK 547
+SDFG S + + K +GT+ + PE+F +SS K D++S G+ L +
Sbjct: 193 LSDFGESEYMVDKK---IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249
Query: 548 KPICL 552
P L
Sbjct: 250 VPFSL 254
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 39/230 (16%)
Query: 333 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQIN 388
+D Y + + LG G +G V K + +I +K+S + ++EV +L Q++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
H +I+KL + LV E G L I +
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI----------------ILRQKFSEVDA 106
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTH 505
+ +V Y+H I HRD+K N+LL+ K K+ DFG S H
Sbjct: 107 AVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS-------AH 156
Query: 506 LTTAVQ-----GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+ GT Y PE + +Y +K DV+S GV+L LL G P
Sbjct: 157 FEVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 131/326 (40%), Gaps = 77/326 (23%)
Query: 312 LSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSR 367
++ C K+ +E + Y LG GGFG+VY G+ + D VA+K + R
Sbjct: 21 MAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDR 80
Query: 368 AIDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL-VYEYI 412
D ++ + EVV+L +++ +++LL LE PV ++++I
Sbjct: 81 ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI 140
Query: 413 S-NGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIF 471
+ G L + +V AV + H+ +
Sbjct: 141 TERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG---VL 171
Query: 472 HRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDK 530
HRDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ + +Y +
Sbjct: 172 HRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGR 228
Query: 531 S-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREE 589
S V+S G++L +++ G P +EE +F RV+ E +
Sbjct: 229 SAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQVFF-------------RQRVSSECQ-- 271
Query: 590 DIEAVAELAMGCLRLNSKKRPTMKQV 615
L CL L RPT +++
Sbjct: 272 ------HLIRWCLALRPSDRPTFEEI 291
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 58/247 (23%)
Query: 335 NYNQSRFLGQGGFGTVYKG-MLPDGSIVAVK---RSRAIDKTQIEQFIN---EVVILSQI 387
Y LG+GGFGTV+ G L D VA+K R+R + + + + EV +L ++
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 388 N----HRHIVKLL-------GCCLETEVPVL---VYEYIS-NGTLSHHIHDHXXXXXXXX 432
H +++LL G L E P+ +++YI+ G L
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGE------------- 138
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVS 491
+R +V A+ + HS + HRDIK NIL+D + AK+
Sbjct: 139 ------------GPSRCFFG-QVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLI 182
Query: 492 DFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLTGKKPI 550
DFG S ++ +D+ + T GT Y PE+ QY + V+S G++L +++ G P
Sbjct: 183 DFG-SGALLHDEPY--TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP- 238
Query: 551 CLTREEE 557
R++E
Sbjct: 239 -FERDQE 244
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+K+ R +T+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 109
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +++ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 110 --FQLLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE 163
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 164 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 97/240 (40%), Gaps = 52/240 (21%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVI--LSQINHRH 391
DN +G+G +G VYKG L D VAVK + FINE I + + H +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVK---VFSFANRQNFINEKNIYRVPLMEHDN 68
Query: 392 IVKLLGCCLETEVP-----VLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
I + + +LV EY NG+L ++ H
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWV----------------- 111
Query: 447 NRVRVACEVAGAVAYMHSAASIP--------IFHRDIKSSNILLDDKFSAKVSDFGTSRS 498
+ R+A V +AY+H+ +P I HRD+ S N+L+ + + +SDFG S
Sbjct: 112 SSCRLAHSVTRGLAYLHT--ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Query: 499 V-------PNDKTHLTTAVQGTFGYFDPEYFQSS-------QYTDKSDVYSFGVVLLELL 544
+ P ++ + + GT Y PE + + + D+Y+ G++ E+
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 152 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 130/325 (40%), Gaps = 77/325 (23%)
Query: 313 SSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRA 368
+ C K+ +E + Y LG GGFG+VY G+ + D VA+K + R
Sbjct: 2 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 61
Query: 369 IDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL-VYEYIS 413
D ++ + EVV+L +++ +++LL LE PV ++++I+
Sbjct: 62 SDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT 121
Query: 414 N-GTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFH 472
G L + +V AV + H+ + H
Sbjct: 122 ERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG---VLH 152
Query: 473 RDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS 531
RDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ + +Y +S
Sbjct: 153 RDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRS 209
Query: 532 -DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREED 590
V+S G++L +++ G P +EE +F RV+ E +
Sbjct: 210 AAVWSLGILLYDMVCGDIP--FEHDEEIIRGQVFF-------------RQRVSSECQ--- 251
Query: 591 IEAVAELAMGCLRLNSKKRPTMKQV 615
L CL L RPT +++
Sbjct: 252 -----HLIRWCLALRPSDRPTFEEI 271
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 101/270 (37%), Gaps = 51/270 (18%)
Query: 309 QQRLSSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR 365
QQR S A + + D Y +G G +G V Y + + +VA+K+
Sbjct: 28 QQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKL--EKRVVAIKK 85
Query: 366 SRAI--DKTQIEQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHD 423
+ D ++ + E+ IL+++NH H+VK+L + +V E + I D
Sbjct: 86 ILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDV-----EKFDELYVVLEIAD 140
Query: 424 HXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD 483
N + V Y+HSA I HRD+K +N L++
Sbjct: 141 SDFKKLFRTPVYLTELHIKTLLYN-------LLVGVKYVHSAG---ILHRDLKPANCLVN 190
Query: 484 DKFSAKVSDFGTSRSV---------------------------PNDKTHLTTAVQGTFGY 516
S KV DFG +R+V N K LT V T Y
Sbjct: 191 QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVV-TRWY 249
Query: 517 FDPEY-FQSSQYTDKSDVYSFGVVLLELLT 545
PE YT+ DV+S G + ELL
Sbjct: 250 RAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTT 508
+ + ++A AV ++HS + HRD+K SNI KV DFG ++ D+ T
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 509 AVQ-----------GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELL 544
GT Y PE + Y+ K D++S G++L ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 342 LGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQI-EQFINEVVILSQINHRHIVKLLGCC 399
+G+GGFG V++ D A+KR R ++ E+ + EV L+++ H IV+
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 73
Query: 400 LET 402
LET
Sbjct: 74 LET 76
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 130/325 (40%), Gaps = 77/325 (23%)
Query: 313 SSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRA 368
+ C K+ +E + Y LG GGFG+VY G+ + D VA+K + R
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 62
Query: 369 IDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL-VYEYIS 413
D ++ + EVV+L +++ +++LL LE PV ++++I+
Sbjct: 63 SDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT 122
Query: 414 N-GTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFH 472
G L + +V AV + H+ + H
Sbjct: 123 ERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG---VLH 153
Query: 473 RDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS 531
RDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ + +Y +S
Sbjct: 154 RDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRS 210
Query: 532 -DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREED 590
V+S G++L +++ G P +EE +F RV+ E +
Sbjct: 211 AAVWSLGILLYDMVCGDIP--FEHDEEIIRGQVFF-------------RQRVSSECQ--- 252
Query: 591 IEAVAELAMGCLRLNSKKRPTMKQV 615
L CL L RPT +++
Sbjct: 253 -----HLIRWCLALRPSDRPTFEEI 272
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 130/325 (40%), Gaps = 77/325 (23%)
Query: 313 SSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRA 368
+ C K+ +E + Y LG GGFG+VY G+ + D VA+K + R
Sbjct: 2 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 61
Query: 369 IDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL-VYEYIS 413
D ++ + EVV+L +++ +++LL LE PV ++++I+
Sbjct: 62 SDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT 121
Query: 414 N-GTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFH 472
G L + +V AV + H+ + H
Sbjct: 122 ERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG---VLH 152
Query: 473 RDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS 531
RDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ + +Y +S
Sbjct: 153 RDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRS 209
Query: 532 -DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREED 590
V+S G++L +++ G P +EE +F RV+ E +
Sbjct: 210 AAVWSLGILLYDMVCGDIP--FEHDEEIIRGQVFF-------------RQRVSXECQ--- 251
Query: 591 IEAVAELAMGCLRLNSKKRPTMKQV 615
L CL L RPT +++
Sbjct: 252 -----HLIRWCLALRPSDRPTFEEI 271
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 322 KIFTAEELQRATDNY---NQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQ----I 374
+I TA+ Q A +++ +++ LG G FG V+K + + +K + I KT+
Sbjct: 76 RIVTAK--QGAVNSFYTVSKTEILGGGRFGQVHKC---EETATGLKLAAKIIKTRGMKDK 130
Query: 375 EQFINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXX 434
E+ NE+ +++Q++H ++++L VLV EY+ G L I D
Sbjct: 131 EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE---------- 180
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL--DDKFSAKVSD 492
+ + ++ + +MH + I H D+K NIL D K+ D
Sbjct: 181 -----SYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIID 232
Query: 493 FGTSRSV-PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
FG +R P +K + GT + PE + +D++S GV+ LL+G P
Sbjct: 233 FGLARRYKPREKLKVNF---GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFL 289
Query: 552 LTREEEERN 560
+ E N
Sbjct: 290 GDNDAETLN 298
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 130/325 (40%), Gaps = 77/325 (23%)
Query: 313 SSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRA 368
+ C K+ +E + Y LG GGFG+VY G+ + D VA+K + R
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 62
Query: 369 IDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL-VYEYIS 413
D ++ + EVV+L +++ +++LL LE PV ++++I+
Sbjct: 63 SDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT 122
Query: 414 N-GTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFH 472
G L + +V AV + H+ + H
Sbjct: 123 ERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG---VLH 153
Query: 473 RDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS 531
RDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ + +Y +S
Sbjct: 154 RDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRS 210
Query: 532 -DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREED 590
V+S G++L +++ G P +EE +F RV+ E +
Sbjct: 211 AAVWSLGILLYDMVCGDIP--FEHDEEIIRGQVFF-------------RQRVSXECQ--- 252
Query: 591 IEAVAELAMGCLRLNSKKRPTMKQV 615
L CL L RPT +++
Sbjct: 253 -----HLIRWCLALRPSDRPTFEEI 272
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 130/325 (40%), Gaps = 77/325 (23%)
Query: 313 SSCGSSEKAKIFTAEELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRA 368
+ C K+ +E + Y LG GGFG+VY G+ + D VA+K + R
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI 62
Query: 369 IDKTQIE---QFINEVVILSQIN--HRHIVKLLGC---------CLETEVPVL-VYEYIS 413
D ++ + EVV+L +++ +++LL LE PV ++++I+
Sbjct: 63 SDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT 122
Query: 414 N-GTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFH 472
G L + +V AV + H+ + H
Sbjct: 123 ERGALQEELAR--------------------------SFFWQVLEAVRHCHNCG---VLH 153
Query: 473 RDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS 531
RDIK NIL+D ++ K+ DFG+ + K + T GT Y PE+ + +Y +S
Sbjct: 154 RDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRS 210
Query: 532 -DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREED 590
V+S G++L +++ G P +EE +F RV+ E +
Sbjct: 211 AAVWSLGILLYDMVCGDIP--FEHDEEIIRGQVFF-------------RQRVSXECQ--- 252
Query: 591 IEAVAELAMGCLRLNSKKRPTMKQV 615
L CL L RPT +++
Sbjct: 253 -----HLIRWCLALRPXDRPTFEEI 272
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 130 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA-VQGTFGYFDPE 520
M AS HRD+ + NILL +K K+ DFG +R + D ++ + + PE
Sbjct: 204 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 263
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEE 558
YT +SDV+SFGV+L E+ + G P + +EE
Sbjct: 264 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 302
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 137 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 138 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 129 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA-VQGTFGYFDPE 520
M AS HRD+ + NILL +K K+ DFG +R + D ++ + + PE
Sbjct: 206 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEE 558
YT +SDV+SFGV+L E+ + G P + +EE
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 304
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 130 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 152 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA-VQG 512
+VA + ++ S I HRD+ + NILL +K K+ DFG +R + D ++ +
Sbjct: 206 QVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEE 558
+ PE YT +SDV+SFGV+L E+ + G P + +EE
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 309
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 140 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H T
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 32/234 (13%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGMLPDGS----IVAVKRSRAIDKTQIE-----QFINEVVI 383
+ Y+ LG G FG V+ + + + + +K+ + ++ IE + E+ I
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 384 LSQINHRHIVKLLGCCLETEVPVLVYEYISNG-TLSHHIHDHXXXXXXXXXXXXXXXXXX 442
LS++ H +I+K+L LV E +G L I H
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY-------- 134
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ AV Y+ I HRDIK NI++ + F+ K+ DFG++ +
Sbjct: 135 --------IFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG 183
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGKKPICLTRE 555
K T GT Y PE + Y +++S GV L L+ + P C E
Sbjct: 184 KLFYTFC--GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE 235
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 462 MHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA-VQGTFGYFDPE 520
M AS HRD+ + NILL +K K+ DFG +R + D ++ + + PE
Sbjct: 213 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 272
Query: 521 YFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEE 558
YT +SDV+SFGV+L E+ + G P + +EE
Sbjct: 273 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 311
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+ + R +T+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 109
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 110 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE 163
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 164 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSRAIDKTQ--IEQFINEVVILSQINHR 390
+N+ + +G+G +G VYK G +VA+ + R +T+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+IVKLL LV+E+ +H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYL---- 108
Query: 451 VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VPNDKTHLTT 508
++ +A+ HS + HRD+K N+L++ + + K++DFG +R+ VP +T+
Sbjct: 109 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHE 162
Query: 509 AVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGK 547
V T Y PE +Y + D++S G + E++T +
Sbjct: 163 VV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKR----SRAIDKTQIEQFINEVVILSQINH 389
D Y+ LG G FG V++ + V V + +DK ++ NE+ I++Q++H
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK---NEISIMNQLHH 107
Query: 390 RHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRV 449
++ L + VL+ E++S G L I N +
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRI------------AAEDYKMSEAEVINYM 155
Query: 450 RVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDK--FSAKVSDFGTSRSV-PNDKTHL 506
R ACE + +MH + I H DIK NI+ + K S K+ DFG + + P++ +
Sbjct: 156 RQACE---GLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209
Query: 507 TTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
TTA T + PE +D+++ GV+ LL+G P
Sbjct: 210 TTA---TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA 251
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 112/290 (38%), Gaps = 33/290 (11%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQINHR 390
+ ++ LG+G +G V P G IVA+K+ DK + + E+ IL H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+I+ + YI + +H + ++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH--------------RVISTQMLSDDHIQ 115
Query: 451 -VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR---------SVP 500
+ AV +H + I HRD+K SN+L++ KV DFG +R S P
Sbjct: 116 YFIYQTLRAVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 501 NDKTHLTTAVQGTFGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEER 559
+ T T Y PE S++Y+ DV+S G +L EL ++PI R+ +
Sbjct: 173 TGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQ 231
Query: 560 NLVAYFI--SLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSK 607
L+ + I + +N L I R + + + A L R+N K
Sbjct: 232 LLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPK 281
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 112/290 (38%), Gaps = 33/290 (11%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQINHR 390
+ ++ LG+G +G V P G IVA+K+ DK + + E+ IL H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+I+ + YI + +H + ++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH--------------RVISTQMLSDDHIQ 115
Query: 451 -VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR---------SVP 500
+ AV +H + I HRD+K SN+L++ KV DFG +R S P
Sbjct: 116 YFIYQTLRAVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 501 NDKTHLTTAVQGTFGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEER 559
+ T T Y PE S++Y+ DV+S G +L EL ++PI R+ +
Sbjct: 173 TGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQ 231
Query: 560 NLVAYFI--SLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSK 607
L+ + I + +N L I R + + + A L R+N K
Sbjct: 232 LLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPK 281
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 32/229 (13%)
Query: 331 RATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRAIDKTQIEQFINEVVIL 384
R T+ Y LG+G F V + G I+ K+ A D ++E+ E I
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARIC 64
Query: 385 SQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXX 444
+ H +IV+L E L+++ ++ G L I
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI----------------VAREYYS 108
Query: 445 XXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF---SAKVSDFGTSRSVPN 501
+ ++ AV + H + HR++K N+LL K + K++DFG + V
Sbjct: 109 EADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165
Query: 502 DKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
++ GT GY PE + Y D+++ GV+L LL G P
Sbjct: 166 EQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 108/273 (39%), Gaps = 33/273 (12%)
Query: 327 EELQRATDNYNQSRFLGQGGFGTV-YKGMLPDGSIVAVK---RSRAIDKTQIEQFINEVV 382
+E++ D++ + +G+G F V M G + A+K + + + ++ F E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 383 ILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
+L + R I +L + LV EY G L
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDL--------------LTLLSKFGERI 159
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
R +A E+ A+ +H + HRDIK NILLD +++DFG+ + D
Sbjct: 160 PAEMARFYLA-EIVMAIDSVHRLGYV---HRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215
Query: 503 KTHLTTAVQGTFGYFDPEYFQS-------SQYTDKSDVYSFGVVLLELLTGKKPICLTRE 555
T + GT Y PE Q+ Y + D ++ GV E+ G+ P
Sbjct: 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST 275
Query: 556 EEERNLVAYFISLAKENKLLEILDARVAKEARE 588
E + ++ KE+ L ++D V +EAR+
Sbjct: 276 AETYGKIVHY----KEHLSLPLVDEGVPEEARD 304
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
+A V + S + HRDIK NIL+D +++DFG+ + D T ++ GT
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTP 240
Query: 515 GYFDPEYFQS-----SQYTDKSDVYSFGVVLLELLTGKKPI 550
Y PE Q+ +Y + D +S GV + E+L G+ P
Sbjct: 241 DYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 41/224 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y + +G G G V Y +L VA+K+ SR ++T ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + LS I DH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY------------- 130
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 --------LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--G 177
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ + T T Y PE Y + D++S GV++ E++ G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 41/224 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y + +G G G V Y +L VA+K+ SR ++T ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + LS I DH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY------------- 130
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 --------LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--G 177
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ + T T Y PE Y + D++S GV++ E++ G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAID-KTQIEQFINEVVILSQINHRH 391
Y Q +++G+G +G V Y + + VA+K+ + +T ++ + E+ IL + H +
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHV--RKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 392 IVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRV 451
++ + + + + YI + ++ +
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLY-------------KLLKSQQLSNDHICYF 149
Query: 452 ACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR--SVPNDKTHLTTA 509
++ + Y+HSA + HRD+K SN+L++ K+ DFG +R +D T T
Sbjct: 150 LYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTE 206
Query: 510 VQGTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 207 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 41/224 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y Q + +G G G V + +L G VAVK+ SR ++T ++ E+V+L +NH+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 81
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + L IH DH
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSY------------- 128
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+ +
Sbjct: 129 --------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTN 177
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ T T Y PE Y + D++S G ++ EL+ G
Sbjct: 178 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 93/234 (39%), Gaps = 38/234 (16%)
Query: 332 ATDN-YNQSRF-----LGQGGFGTVYK------GMLPDGSIVAVKRSRAIDKTQIEQFIN 379
T+N Y QS + LG+G F V + G I+ K+ A D ++E+
Sbjct: 14 GTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER--- 70
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
E I + H +IV+L E L+++ ++ G L I
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI----------------VA 114
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF---SAKVSDFGTS 496
+ ++ AV + H + HRD+K N+LL K + K++DFG +
Sbjct: 115 REYYSEADASHCIQQILEAVLHCHQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLA 171
Query: 497 RSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
V ++ GT GY PE + Y D+++ GV+L LL G P
Sbjct: 172 IEVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
+ V + S + HRDIK N+LLD +++DFG+ + +D T ++ GT
Sbjct: 181 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTP 240
Query: 515 GYFDPEYFQS-----SQYTDKSDVYSFGVVLLELLTGKKPI 550
Y PE Q+ +Y + D +S GV + E+L G+ P
Sbjct: 241 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV---PNDKTHLTTAVQGTFGYF 517
YMHSA + HRD+K SN+L+++ K+ DFG +R + P + + T T Y
Sbjct: 174 YMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 518 DPEYFQS-SQYTDKSDVYSFGVVLLELLTGKK 548
PE S +YT D++S G + E+L ++
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
+ V + S + HRDIK N+LLD +++DFG+ + +D T ++ GT
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTP 256
Query: 515 GYFDPEYFQS-----SQYTDKSDVYSFGVVLLELLTGKKPI 550
Y PE Q+ +Y + D +S GV + E+L G+ P
Sbjct: 257 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 24/254 (9%)
Query: 336 YNQSRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVK 394
Y + LG GG G V+ + D VA+K+ D ++ + E+ I+ +++H +IVK
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 395 LL------GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
+ G L +V G+L+ + +
Sbjct: 73 VFEILGPSGSQLTDDV----------GSLTELNSVYIVQEYMETDLANVLEQGPLLEEHA 122
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLT 507
++ + Y+HSA + HRD+K +N+ ++ + K+ DFG +R + +H
Sbjct: 123 RLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKG 179
Query: 508 TAVQG--TFGYFDPEYFQS-SQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAY 564
+G T Y P S + YT D+++ G + E+LTGK E E+ L+
Sbjct: 180 HLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE 239
Query: 565 FISLAKENKLLEIL 578
I + E E+L
Sbjct: 240 SIPVVHEEDRQELL 253
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSV---PNDKTHLTTAVQGTFGYF 517
YMHSA + HRD+K SN+L+++ K+ DFG +R + P + + T T Y
Sbjct: 173 YMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 518 DPEYFQS-SQYTDKSDVYSFGVVLLELLTGKK 548
PE S +YT D++S G + E+L ++
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH--LTTAVQ 511
++ + Y+HSA + HRD+K SN+LL+ K+ DFG +R D H
Sbjct: 137 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 512 GTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGK 547
T Y PE +S+ YT D++S G +L E+L+ +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 86/217 (39%), Gaps = 32/217 (14%)
Query: 342 LGQGGFG-TVYKGMLPDGSIVAVK----RSRAIDKTQIEQFINEVVILSQINHRHIVKLL 396
LG G F V G + AVK ++ ++ IE NE+ +L +I H +IV L
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIE---NEIAVLRKIKHENIVALE 86
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
LV + +S G L I + + +V
Sbjct: 87 DIYESPNHLYLVMQLVSGGELFDRI----------------VEKGFYTEKDASTLIRQVL 130
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
AV Y+H + I HRD+K N+L D++ +SDFG S+ K + + GT
Sbjct: 131 DAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGT 185
Query: 514 FGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
GY PE Y+ D +S GV+ LL G P
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 333 TDNYNQSRFLGQGGFGTVY----KGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQIN 388
+D + LG+G VY KG ++ +K++ +DK + E+ +L +++
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVR---TEIGVLLRLS 106
Query: 389 HRHIVKLLGCCLETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H +I+KL ET + LV E ++ G L I + +
Sbjct: 107 HPNIIKL-KEIFETPTEISLVLELVTGGELFDRIVEKGYYSER----------------D 149
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD---KFSAKVSDFGTSRSVPNDKT 504
++ AVAY+H I HRD+K N+L K++DFG S+ V +
Sbjct: 150 AADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQ 204
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
L V GT GY PE + Y + D++S G++ LL G +P
Sbjct: 205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 120/303 (39%), Gaps = 64/303 (21%)
Query: 329 LQRATDNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIEQ--FINEVVILS 385
++ D+ LG+G +G V K +P G I+AVKR RA +Q ++ ++ + +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 386 QINHRHIVKLLGC---------CLE---TEVPVLVYEYISNG-TLSHHIHDHXXXXXXXX 432
++ V G C+E T + + I G T+ I
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG--------- 112
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSD 492
++A + A+ ++HS S+ HRD+K SN+L++ K+ D
Sbjct: 113 -----------------KIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCD 153
Query: 493 FGTSRSVPNDKTHLTTAVQGTFGYFDPEY----FQSSQYTDKSDVYSFGVVLLELLTGKK 548
FG S + +D A G Y PE Y+ KSD++S G+ ++EL +
Sbjct: 154 FGISGYLVDDVAKDIDA--GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRF 211
Query: 549 PICLTREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKK 608
P Y +L ++++ + ++ + CL+ NSK+
Sbjct: 212 P--------------YDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKE 257
Query: 609 RPT 611
RPT
Sbjct: 258 RPT 260
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 470 IFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTTAVQGTFGYFDPEYFQSSQ-- 526
I HRD+K NILLDD + K++DFG S + P +K +V GT Y PE + S
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGTPSYLAPEIIECSMND 201
Query: 527 ----YTDKSDVYSFGVVLLELLTGKKPIC 551
Y + D++S GV++ LL G P
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 111/290 (38%), Gaps = 33/290 (11%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIE-QFINEVVILSQINHR 390
+ ++ LG+G +G V P G IVA+K+ DK + + E+ IL H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 391 HIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR 450
+I+ + YI + +H + ++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLH--------------RVISTQMLSDDHIQ 115
Query: 451 -VACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSR---------SVP 500
+ AV +H + I HRD+K SN+L++ KV DFG +R S P
Sbjct: 116 YFIYQTLRAVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEP 172
Query: 501 NDKTHLTTAVQGTFGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEER 559
+ T Y PE S++Y+ DV+S G +L EL ++PI R+ +
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQ 231
Query: 560 NLVAYFI--SLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSK 607
L+ + I + +N L I R + + + A L R+N K
Sbjct: 232 LLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPK 281
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 41/224 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y Q + +G G G V + +L G VAVK+ SR ++T ++ E+V+L +NH+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 83
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + L IH DH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSY------------- 130
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+ +
Sbjct: 131 --------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 179
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ T T Y PE Y D++S G ++ EL+ G
Sbjct: 180 --FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 95/237 (40%), Gaps = 38/237 (16%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGMLPDG---SIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
+D Y+ + +G G FG ++ D +VAVK R AID+ + IN
Sbjct: 19 SDRYDFVKDIGSGNFGVAR--LMRDKLTKELVAVKYIERGAAIDENVQREIINH----RS 72
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +IV+ L ++ EY S G L I +
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ--------- 123
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA--KVSDFGTSRSVPNDKT 504
++ V+Y HS + I HRD+K N LLD + K+ DFG S+S
Sbjct: 124 -------QLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDK-SDVYSFGVVLLELLTGKKPICLTREEEERN 560
+T GT Y PE +Y K +DV+S GV L +L G P EE R+
Sbjct: 174 PKSTV--GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP--FEDPEEPRD 226
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 48/231 (20%)
Query: 336 YNQSRFLGQGGFGTVYKGMLPDG-SIVAVKRSRAIDKTQ--IEQFINEVVILSQINHRHI 392
Y + +G+G +GTV+K + IVA+KR R D + + E+ +L ++ H++I
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 393 VKLLGCCLETEVPVLVYEYIS----------NGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
V+L + LV+E+ NG L I
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKS------------------ 105
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VP 500
++ + + HS + HRD+K N+L++ K++DFG +R+ +P
Sbjct: 106 --------FLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154
Query: 501 NDKTHLTTAVQGTFGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+A T Y P+ F + Y+ D++S G + EL +P+
Sbjct: 155 ---VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 470 IFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTTAVQGTFGYFDPEYFQSSQ-- 526
I HRD+K NILLDD + K++DFG S + P +K V GT Y PE + S
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMND 188
Query: 527 ----YTDKSDVYSFGVVLLELLTGKKPIC 551
Y + D++S GV++ LL G P
Sbjct: 189 NHPGYGKEVDMWSTGVIMYTLLAGSPPFW 217
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 130/307 (42%), Gaps = 65/307 (21%)
Query: 336 YNQSRFLGQGGFGTVYKGMLPD----GSI----VAVKRSRAIDKTQIEQFINEVVILSQI 387
+N+S LGQG F ++KG+ + G + V +K + E F ++S++
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
+H+H+V G C + +LV E++ G+L ++ +
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCI------------------- 110
Query: 448 RVRVACEVAGAVAY-MHSAASIPIFHRDIKSSNILL---DDKFSA-----KVSDFGTSRS 498
+ EVA +A+ MH + H ++ + NILL +D+ + K+SD G S +
Sbjct: 111 NILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT 170
Query: 499 V-PNDKTHLTTAVQGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLT-GKKPICLTRE 555
V P D +Q + PE ++ + + +D +SFG L E+ + G KP L+
Sbjct: 171 VLPKD------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP--LSAL 222
Query: 556 EEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
+ +R L Y E++ L A A E +A L C+ RP+ + +
Sbjct: 223 DSQRKLQFY------EDR--HQLPAPKAAE--------LANLINNCMDYEPDHRPSFRAI 266
Query: 616 SMDLEGL 622
DL L
Sbjct: 267 IRDLNSL 273
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 470 IFHRDIKSSNILLDDKFSAKVSDFGTSRSV-PNDKTHLTTAVQGTFGYFDPEYFQSSQ-- 526
I HRD+K NILLDD + K++DFG S + P +K V GT Y PE + S
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMND 201
Query: 527 ----YTDKSDVYSFGVVLLELLTGKKPIC 551
Y + D++S GV++ LL G P
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 132/306 (43%), Gaps = 63/306 (20%)
Query: 336 YNQSRFLGQGGFGTVYKGMLPD----GSI----VAVKRSRAIDKTQIEQFINEVVILSQI 387
+N+S LGQG F ++KG+ + G + V +K + E F ++S++
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
+H+H+V G C+ + +LV E++ G+L ++ +
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--------------- 114
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL---DDKFSA-----KVSDFGTSRSV 499
++ VA ++A A MH + H ++ + NILL +D+ + K+SD G S +V
Sbjct: 115 KLEVAKQLAAA---MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 500 -PNDKTHLTTAVQGTFGYFDPEYFQSSQYTD-KSDVYSFGVVLLELLT-GKKPICLTREE 556
P D +Q + PE ++ + + +D +SFG L E+ + G KP L+ +
Sbjct: 172 LPKD------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP--LSALD 223
Query: 557 EERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVS 616
+R L Y E++ L A A E +A L C+ RP+ + +
Sbjct: 224 SQRKLQFY------EDR--HQLPAPKAAE--------LANLINNCMDYEPDHRPSFRAII 267
Query: 617 MDLEGL 622
DL L
Sbjct: 268 RDLNSL 273
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 115/290 (39%), Gaps = 64/290 (22%)
Query: 342 LGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIEQ--FINEVVILSQINHRHIVKLLGC 398
LG+G +G V K +P G I+AVKR RA +Q ++ ++ + + ++ V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 399 ---------CLE---TEVPVLVYEYISNG-TLSHHIHDHXXXXXXXXXXXXXXXXXXXXX 445
C+E T + + I G T+ I
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG---------------------- 156
Query: 446 XNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTH 505
++A + A+ ++HS S+ HRD+K SN+L++ K+ DFG S + +
Sbjct: 157 ----KIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK 210
Query: 506 LTTAVQGTFGYFDPEY----FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNL 561
A G Y PE Y+ KSD++S G+ ++EL + P
Sbjct: 211 TIDA--GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP------------ 256
Query: 562 VAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPT 611
Y +L ++++ + ++ + CL+ NSK+RPT
Sbjct: 257 --YDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 304
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 93/221 (42%), Gaps = 42/221 (19%)
Query: 343 GQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCLE- 401
+G FG V+K L + VAVK DK Q Q EV L + H +I++ +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 402 TEVPV---LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGA 458
T V V L+ + G+LS + +A +A
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFL-----------------KANVVSWNELCHIAETMARG 133
Query: 459 VAYMHSAASIP---------IFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA 509
+AY+H IP I HRDIKS N+LL + +A ++DFG + K+ T
Sbjct: 134 LAYLHE--DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH 191
Query: 510 VQ-GTFGYFDPEY------FQSSQYTDKSDVYSFGVVLLEL 543
Q GT Y PE FQ + + D+Y+ G+VL EL
Sbjct: 192 GQVGTRRYMAPEVLEGAINFQRDAFL-RIDMYAMGLVLWEL 231
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 118/292 (40%), Gaps = 55/292 (18%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIE---QFINEVVILSQI 387
Y LG GGFG+VY G+ + D VA+K + R D ++ + EVV+L ++
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 388 N--HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXX 445
+ +++LL + VL+ E + + D
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEP------VQDLFDFITERGALQEELARS---- 118
Query: 446 XNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKT 504
+V AV + H+ + HRDIK NIL+D ++ K+ DFG+ + K
Sbjct: 119 -----FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KD 167
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVA 563
+ T GT Y PE+ + +Y +S V+S G++L +++ G P +EE
Sbjct: 168 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQV 225
Query: 564 YFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
+F RV+ E + L CL L RPT +++
Sbjct: 226 FF-------------RQRVSSECQ--------HLIRWCLALRPSDRPTFEEI 256
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 77/303 (25%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIE---QFINEVVILSQI 387
Y LG GGFG+VY G+ + D VA+K + R D ++ + EVV+L ++
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 388 N--HRHIVKLLGC---------CLETEVPVL-VYEYISN-GTLSHHIHDHXXXXXXXXXX 434
+ +++LL LE PV ++++I+ G L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----------- 118
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDF 493
+V AV + H+ + HRDIK NIL+D ++ K+ DF
Sbjct: 119 ---------------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDF 160
Query: 494 GTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGKKPICL 552
G+ + K + T GT Y PE+ + +Y +S V+S G++L +++ G P
Sbjct: 161 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--F 215
Query: 553 TREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTM 612
+EE +F RV+ E + L CL L RPT
Sbjct: 216 EHDEEIIRGQVFF-------------RQRVSSECQ--------HLIRWCLALRPSDRPTF 254
Query: 613 KQV 615
+++
Sbjct: 255 EEI 257
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 472 HRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK-THLTTAVQGTFGYFDPEYFQSSQYTDK 530
HRD+K NIL+ A + DFG + + ++K T L V GT Y PE F S T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 531 SDVYSFGVVLLELLTGKKP 549
+D+Y+ VL E LTG P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 77/303 (25%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIE---QFINEVVILSQI 387
Y LG GGFG+VY G+ + D VA+K + R D ++ + EVV+L ++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 388 N--HRHIVKLLGC---------CLETEVPVL-VYEYIS-NGTLSHHIHDHXXXXXXXXXX 434
+ +++LL LE PV ++++I+ G L +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----------- 113
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDF 493
+V AV + H+ + HRDIK NIL+D ++ K+ DF
Sbjct: 114 ---------------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDF 155
Query: 494 GTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGKKPICL 552
G+ + K + T GT Y PE+ + +Y +S V+S G++L +++ G P
Sbjct: 156 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-- 210
Query: 553 TREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTM 612
E + ++ + + RV+ E + L CL L RPT
Sbjct: 211 ---EHDEEIIGGQVFFRQ----------RVSSECQ--------HLIRWCLALRPSDRPTF 249
Query: 613 KQV 615
+++
Sbjct: 250 EEI 252
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 77/303 (25%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIE---QFINEVVILSQI 387
Y LG GGFG+VY G+ + D VA+K + R D ++ + EVV+L ++
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 388 N--HRHIVKLLGC---------CLETEVPVL-VYEYIS-NGTLSHHIHDHXXXXXXXXXX 434
+ +++LL LE PV ++++I+ G L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----------- 118
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDF 493
+V AV + H+ + HRDIK NIL+D ++ K+ DF
Sbjct: 119 ---------------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDF 160
Query: 494 GTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGKKPICL 552
G+ + K + T GT Y PE+ + +Y +S V+S G++L +++ G P
Sbjct: 161 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--F 215
Query: 553 TREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTM 612
+EE +F RV+ E + L CL L RPT
Sbjct: 216 EHDEEIIRGQVFF-------------RQRVSSECQ--------HLIRWCLALRPSDRPTF 254
Query: 613 KQV 615
+++
Sbjct: 255 EEI 257
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 41/224 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y + +G G G V Y +L VA+K+ SR ++T ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + LS I DH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY------------- 130
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 --------LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--G 177
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ + T T Y PE Y + D++S G ++ E++ G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 77/303 (25%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIE---QFINEVVILSQI 387
Y LG GGFG+VY G+ + D VA+K + R D ++ + EVV+L ++
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 388 N--HRHIVKLLGC---------CLETEVPVL-VYEYISN-GTLSHHIHDHXXXXXXXXXX 434
+ +++LL LE PV ++++I+ G L +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----------- 117
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDF 493
+V AV + H+ + HRDIK NIL+D ++ K+ DF
Sbjct: 118 ---------------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDF 159
Query: 494 GTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGKKPICL 552
G+ + K + T GT Y PE+ + +Y +S V+S G++L +++ G P
Sbjct: 160 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--F 214
Query: 553 TREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTM 612
+EE +F RV+ E + L CL L RPT
Sbjct: 215 EHDEEIIRGQVFF-------------RQRVSSECQ--------HLIRWCLALRPSDRPTF 253
Query: 613 KQV 615
+++
Sbjct: 254 EEI 256
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 77/303 (25%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIE---QFINEVVILSQI 387
Y LG GGFG+VY G+ + D VA+K + R D ++ + EVV+L ++
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 388 N--HRHIVKLLGC---------CLETEVPVL-VYEYISN-GTLSHHIHDHXXXXXXXXXX 434
+ +++LL LE PV ++++I+ G L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----------- 118
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDF 493
+V AV + H+ + HRDIK NIL+D ++ K+ DF
Sbjct: 119 ---------------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDF 160
Query: 494 GTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGKKPICL 552
G+ + K + T GT Y PE+ + +Y +S V+S G++L +++ G P
Sbjct: 161 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--F 215
Query: 553 TREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTM 612
+EE +F RV+ E + L CL L RPT
Sbjct: 216 EHDEEIIRGQVFF-------------RQRVSSECQ--------HLIRWCLALRPSDRPTF 254
Query: 613 KQV 615
+++
Sbjct: 255 EEI 257
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 41/224 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y + +G G G V Y +L VA+K+ SR ++T ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + LS I DH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY------------- 130
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 --------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--G 177
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ + T T Y PE Y + D++S G ++ E++ G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-------------- 130
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 -------LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GT 178
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 77/303 (25%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIE---QFINEVVILSQI 387
Y LG GGFG+VY G+ + D VA+K + R D ++ + EVV+L ++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 388 N--HRHIVKLLGC---------CLETEVPVL-VYEYIS-NGTLSHHIHDHXXXXXXXXXX 434
+ +++LL LE PV ++++I+ G L +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----------- 113
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDF 493
+V AV + H+ + HRDIK NIL+D ++ K+ DF
Sbjct: 114 ---------------SFFWQVLEAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDF 155
Query: 494 GTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGKKPICL 552
G+ + K + T GT Y PE+ + +Y +S V+S G++L +++ G P
Sbjct: 156 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--F 210
Query: 553 TREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTM 612
+EE +F RV+ E + L CL L RPT
Sbjct: 211 EHDEEIIRGQVFF-------------RQRVSXECQ--------HLIRWCLALRPSDRPTF 249
Query: 613 KQV 615
+++
Sbjct: 250 EEI 252
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 77/303 (25%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIE---QFINEVVILSQI 387
Y LG GGFG+VY G+ + D VA+K + R D ++ + EVV+L ++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 388 N--HRHIVKLLGC---------CLETEVPVL-VYEYIS-NGTLSHHIHDHXXXXXXXXXX 434
+ +++LL LE PV ++++I+ G L +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----------- 113
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDF 493
+V AV + H+ + HRDIK NIL+D ++ K+ DF
Sbjct: 114 ---------------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDF 155
Query: 494 GTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGKKPICL 552
G+ + K + T GT Y PE+ + +Y +S V+S G++L +++ G P
Sbjct: 156 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--F 210
Query: 553 TREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTM 612
+EE +F RV+ E + L CL L RPT
Sbjct: 211 EHDEEIIRGQVFF-------------RQRVSSECQ--------HLIRWCLALRPSDRPTF 249
Query: 613 KQV 615
+++
Sbjct: 250 EEI 252
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 77/303 (25%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIE---QFINEVVILSQI 387
Y LG GGFG+VY G+ + D VA+K + R D ++ + EVV+L ++
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 388 N--HRHIVKLLGC---------CLETEVPVL-VYEYIS-NGTLSHHIHDHXXXXXXXXXX 434
+ +++LL LE PV ++++I+ G L +
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----------- 116
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDF 493
+V AV + H+ + HRDIK NIL+D ++ K+ DF
Sbjct: 117 ---------------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDF 158
Query: 494 GTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGKKPICL 552
G+ + K + T GT Y PE+ + +Y +S V+S G++L +++ G P
Sbjct: 159 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--F 213
Query: 553 TREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTM 612
+EE +F RV+ E + L CL L RPT
Sbjct: 214 EHDEEIIRGQVFF-------------RQRVSSECQ--------HLIRWCLALRPSDRPTF 252
Query: 613 KQV 615
+++
Sbjct: 253 EEI 255
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 77/303 (25%)
Query: 335 NYNQSRFLGQGGFGTVYKGM-LPDGSIVAVK---RSRAIDKTQIE---QFINEVVILSQI 387
Y LG GGFG+VY G+ + D VA+K + R D ++ + EVV+L ++
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 388 N--HRHIVKLLGC---------CLETEVPVL-VYEYISN-GTLSHHIHDHXXXXXXXXXX 434
+ +++LL LE PV ++++I+ G L +
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR----------- 140
Query: 435 XXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDF 493
+V AV + H+ + HRDIK NIL+D ++ K+ DF
Sbjct: 141 ---------------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDF 182
Query: 494 GTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGKKPICL 552
G+ + K + T GT Y PE+ + +Y +S V+S G++L +++ G P
Sbjct: 183 GSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--F 237
Query: 553 TREEEERNLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTM 612
+EE +F RV+ E + L CL L RPT
Sbjct: 238 EHDEEIIRGQVFF-------------RQRVSXECQ--------HLIRWCLALRPSDRPTF 276
Query: 613 KQV 615
+++
Sbjct: 277 EEI 279
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 121/299 (40%), Gaps = 47/299 (15%)
Query: 342 LGQGGFGTV--YKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCC 399
LG+GGF V +G L DG A+KR ++ E+ E + NH +I++L+ C
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 400 LE----TEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEV 455
L L+ + GTL + I ++ +
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEI---------------ERLKDKGNFLTEDQILWLL 140
Query: 456 AGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS----VPNDKTHLT---- 507
G + + + HRD+K +NILL D+ + D G+ V + LT
Sbjct: 141 LGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDW 200
Query: 508 TAVQGTFGYFDPEYFQSSQY---TDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAY 564
A + T Y PE F + +++DV+S G VL ++ G+ P + ++ +
Sbjct: 201 AAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS----- 255
Query: 565 FISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLR 623
++LA +N+L + + R A+ +L + ++ +RP + + LE L+
Sbjct: 256 -VALAVQNQL------SIPQSPRHSS--ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 41/224 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y + +G G G V Y +L VA+K+ SR ++T ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + LS I DH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY------------- 130
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 --------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--G 177
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ + T T Y PE Y + D++S G ++ E++ G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 39/235 (16%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKG--MLPDGSIVAVKRSRAIDKTQIEQF----INEVVIL 384
RA Y +G+G +G V+K + G VA+KR R +T E I EV +L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVL 65
Query: 385 SQIN---HRHIVKLLGCCL------ETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXX 435
+ H ++V+L C ET++ LV+E++ ++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTY---------------L 109
Query: 436 XXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGT 495
+ ++ + ++HS + HRD+K NIL+ K++DFG
Sbjct: 110 DKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 166
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+R + + + LT+ V T Y PE S Y D++S G + E+ +KP+
Sbjct: 167 AR-IYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 116/301 (38%), Gaps = 49/301 (16%)
Query: 341 FLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLLGCCL 400
+G+G FG VY G + + ++ Q++ F EV+ Q H ++V +G C+
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 401 ETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVR-VACEVAGAV 459
++ TL + D N+ R +A E+ +
Sbjct: 100 SPPHLAIITSLCKGRTLYSVVRD----------------AKIVLDVNKTRQIAQEIVKGM 143
Query: 460 AYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFG---TSRSVPNDKTHLTTAVQ-GTFG 515
Y+H+ I H+D+KS N+ D+ ++DFG S + + +Q G
Sbjct: 144 GYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLC 199
Query: 516 YFDPEYFQSSQ---------YTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFI 566
+ PE + ++ SDV++ G + EL + P + + + + +
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF----KTQPAEAIIWQM 255
Query: 567 SLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLEGLRRSQ 626
+ L +I + KE ++++ + C ++RPT ++ LE L +
Sbjct: 256 GTGMKPNLSQI---GMGKE--------ISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304
Query: 627 R 627
R
Sbjct: 305 R 305
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 35/228 (15%)
Query: 339 SRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQFINEVVILSQIN-HRHIVKLL 396
S LG+G + V + L +G AVK + EV L Q +++I++L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 397 GCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVA 456
+ LV+E + G++ HI RV +VA
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS----------------RVVRDVA 121
Query: 457 GAVAYMHSAASIPIFHRDIKSSNILLD--DKFS-AKVSDF--GTSRSVPNDKTHLTTAVQ 511
A+ ++H+ I HRD+K NIL + +K S K+ DF G+ + N T +TT
Sbjct: 122 AALDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPEL 178
Query: 512 ----GTFGYFDPEYF-----QSSQYTDKSDVYSFGVVLLELLTGKKPI 550
G+ Y PE Q++ Y + D++S GVVL +L+G P
Sbjct: 179 TTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 39/235 (16%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKG--MLPDGSIVAVKRSRAIDKTQIEQF----INEVVIL 384
RA Y +G+G +G V+K + G VA+KR R +T E I EV +L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVL 65
Query: 385 SQIN---HRHIVKLLGCCL------ETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXX 435
+ H ++V+L C ET++ LV+E++ ++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTY---------------L 109
Query: 436 XXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGT 495
+ ++ + ++HS + HRD+K NIL+ K++DFG
Sbjct: 110 DKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 166
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+R + + + LT+ V T Y PE S Y D++S G + E+ +KP+
Sbjct: 167 AR-IYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 41/224 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y + +G G G V Y +L VA+K+ SR ++T ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + LS I DH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY------------- 130
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 --------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--G 177
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ + T T Y PE Y + D++S G ++ E++ G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-------------- 130
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GT 178
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 39/235 (16%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKG--MLPDGSIVAVKRSRAIDKTQIEQF----INEVVIL 384
RA Y +G+G +G V+K + G VA+KR R +T E I EV +L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVL 65
Query: 385 SQIN---HRHIVKLLGCCL------ETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXX 435
+ H ++V+L C ET++ LV+E++ ++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHVDQDLTTY---------------L 109
Query: 436 XXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGT 495
+ ++ + ++HS + HRD+K NIL+ K++DFG
Sbjct: 110 DKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 166
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+R + + + LT+ V T Y PE S Y D++S G + E+ +KP+
Sbjct: 167 AR-IYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 144 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVAT 196
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE + Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTA-VQG 512
+VA + ++ S I HRD+ + NILL + K+ DFG +R + + ++ +
Sbjct: 207 QVARGMEFLSSRKCI---HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 513 TFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLT-GKKPICLTREEEERNLVAYFISLAKE 571
+ PE Y+ KSDV+S+GV+L E+ + G P + +E+ F S +E
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDED------FCSRLRE 317
Query: 572 NKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
+ A E + ++ + C + K+RP ++
Sbjct: 318 GMRM---------RAPEYSTPEIYQIMLDCWHRDPKERPRFAEL 352
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVAT 190
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 100/240 (41%), Gaps = 42/240 (17%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGMLPD---GSIVAVK---RSRAIDKTQIEQFINEVVILSQ 386
+D Y + +G G FG ++ D +VAVK R ID+ + IN
Sbjct: 18 SDRYELVKDIGAGNFGVAR--LMRDKQANELVAVKYIERGEKIDENVKREIINH----RS 71
Query: 387 INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXX 446
+ H +IV+ L +V EY S G L I +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN-----------------AGRFSE 114
Query: 447 NRVRVACE-VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA--KVSDFGTSR-SVPND 502
+ R + + V+Y H+ + + HRD+K N LLD + K++DFG S+ SV +
Sbjct: 115 DEARFFFQQLISGVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHS 171
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDK-SDVYSFGVVLLELLTGKKPICLTREEEERNL 561
+ +AV GT Y PE +Y K +DV+S GV L +L G P EE +N
Sbjct: 172 QP--KSAV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNF 226
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVAT 190
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 34/227 (14%)
Query: 339 SRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQ-IEQFINEVVILSQINHRHIVKLL 396
S LGQG V++G G + A+K I + ++ + E +L ++NH++IVKL
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 397 GCCLETEV--PVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
ET VL+ E+ G+L + + + V +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEE-------------PSNAYGLPESEFLIVLRD 120
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILL----DDKFSAKVSDFGTSRSVPNDKTHLTTAV 510
V G + ++ I HR+IK NI+ D + K++DFG +R + +D+ ++ +
Sbjct: 121 VVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--L 175
Query: 511 QGTFGYFDPEYFQSS--------QYTDKSDVYSFGVVLLELLTGKKP 549
GT Y P+ ++ + +Y D++S GV TG P
Sbjct: 176 YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 95/231 (41%), Gaps = 48/231 (20%)
Query: 336 YNQSRFLGQGGFGTVYKGMLPDG-SIVAVKRSRAIDKTQ--IEQFINEVVILSQINHRHI 392
Y + +G+G +GTV+K + IVA+KR R D + + E+ +L ++ H++I
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 393 VKLLGCCLETEVPVLVYEYIS----------NGTLSHHIHDHXXXXXXXXXXXXXXXXXX 442
V+L + LV+E+ NG L I
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKS------------------ 105
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS--VP 500
++ + + HS + HRD+K N+L++ K+++FG +R+ +P
Sbjct: 106 --------FLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154
Query: 501 NDKTHLTTAVQGTFGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGKKPI 550
+A T Y P+ F + Y+ D++S G + EL +P+
Sbjct: 155 ---VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-------------- 123
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 124 -------LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GT 171
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-------------- 130
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 -------LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GT 178
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 34/228 (14%)
Query: 339 SRFLGQGGFGTVYKGMLPD-GSIVAVKRSRAIDKTQ-IEQFINEVVILSQINHRHIVKLL 396
S LGQG V++G G + A+K I + ++ + E +L ++NH++IVKL
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 397 GCCLETEV--PVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACE 454
ET VL+ E+ G+L + + + V +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF-------------LIVLRD 120
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILL----DDKFSAKVSDFGTSRSVPNDKTHLTTAV 510
V G + ++ I HR+IK NI+ D + K++DFG +R + +D+ + +
Sbjct: 121 VVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV--XL 175
Query: 511 QGTFGYFDPEYFQSS--------QYTDKSDVYSFGVVLLELLTGKKPI 550
GT Y P+ ++ + +Y D++S GV TG P
Sbjct: 176 YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 94/237 (39%), Gaps = 36/237 (15%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGMLPDGS--IVAVK---RSRAIDKTQIEQFINEVVILSQI 387
+D Y + +G G FG V + M S +VAVK R ID+ + IN +
Sbjct: 17 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSL 71
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H +IV+ L +V EY S G L I +
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---------- 121
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA--KVSDFGTSRSVPNDKTH 505
++ V+Y H+ + + HRD+K N LLD + K+ DFG S+S
Sbjct: 122 ------QLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 172
Query: 506 LTTAVQGTFGYFDPEYFQSSQYTDK-SDVYSFGVVLLELLTGKKPICLTREEEERNL 561
+T GT Y PE +Y K +DV+S GV L +L G P EE +N
Sbjct: 173 KSTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNF 225
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-------------- 130
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GT 178
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 140 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVAT 192
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 140 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVAT 192
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 117/296 (39%), Gaps = 38/296 (12%)
Query: 327 EELQRATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRA-IDKTQIEQFINEVVIL 384
E + D+ LG+G +G V K +P G I AVKR RA ++ + ++ + ++ I
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDIS 86
Query: 385 SQ-INHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
+ ++ V G E V + + + +L
Sbjct: 87 XRTVDCPFTVTFYGALFR-EGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILG------ 139
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
++A + A+ ++HS S+ HRD+K SN+L++ K DFG S + +D
Sbjct: 140 ------KIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINALGQVKXCDFGISGYLVDDV 191
Query: 504 THLTTAVQGTFGYFDPEY----FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEER 559
A G Y PE Y+ KSD++S G+ +EL + P
Sbjct: 192 AKDIDA--GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP---------- 239
Query: 560 NLVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
Y +L ++++ + ++ + CL+ NSK+RPT ++
Sbjct: 240 ----YDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVAT 191
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGXVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 140 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVAT 192
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 135 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVAT 187
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 156 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 208
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 144 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 196
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 197 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 191
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 145 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 197
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 145 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 197
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 153 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 205
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 191
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 190
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 143 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 195
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 196 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 145 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 197
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 198 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 139 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 191
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 135 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 187
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 135 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 187
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 152 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 204
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 138 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 190
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 191 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 130 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 182
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 132 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 184
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 185 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 140 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 192
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 153 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 205
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 152 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 204
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 205 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 130 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 182
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 183 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 135 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 187
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 188 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 131 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 183
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 181
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 181
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 181
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 25/228 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
D+Y+ LG G FG V++ G+ A K ++ E E+ +S + H +
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V L + V++YE++S G L + D V
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA---------------VEYM 261
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA--KVSDFG-TSRSVPNDKTHLTTA 509
+V + +MH + H D+K NI+ K S K+ DFG T+ P +TT
Sbjct: 262 RQVCKGLCHMHENNYV---HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT- 317
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEE 557
GT + PE + +D++S GV+ LL+G P ++E
Sbjct: 318 --GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y + +G G G V Y +L VA+K+ SR ++T ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + L I DH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY------------- 130
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 --------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--G 177
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ + T T Y PE Y + D++S G ++ E++ G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y + +G G G V Y +L VA+K+ SR ++T ++ E+V++ +NH+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + L I DH
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY------------- 131
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 132 --------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--G 178
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ + T T Y PE Y + D++S G ++ E++ G
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 32/221 (14%)
Query: 336 YNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFIN-EVVILSQINHRHIVK 394
Y + +G G FG V++ L + VA+K+ Q ++F N E+ I+ + H ++V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-----LQDKRFKNRELQIMRIVKHPNVVD 96
Query: 395 LLGCCL-----ETEVPV-LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
L + EV + LV EY+ H
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMY-------- 148
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA-KVSDFGTSRSVPNDKTHLT 507
++ ++AY+HS I I HRDIK N+LLD K+ DFG+++ + + +++
Sbjct: 149 -----QLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS 200
Query: 508 TAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE F ++ YT D++S G V+ EL+ G+
Sbjct: 201 XICSRY--YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-------------- 124
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 125 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GT 172
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-------------- 124
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 125 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GT 172
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-------------- 123
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 124 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GT 171
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 41/224 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y + +G G G V Y +L VA+K+ SR ++T ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + L I DH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY------------- 130
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 --------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--G 177
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ + T T Y PE Y + D++S G ++ E++ G
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-------------- 130
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GT 178
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-------------- 131
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 132 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GT 179
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-------------- 131
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 132 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GT 179
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 88/231 (38%), Gaps = 25/231 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQI 387
D Y +G+G F V + G IV V + + E E I +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H HIV+LL + +V+E++ L I +
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI---------VKRADAGFVYSEAVASH 134
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA---KVSDFGTSRSVPNDKT 504
+R ++ A+ Y H I HRD+K N+LL K ++ K+ DFG + + +
Sbjct: 135 YMR---QILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQL-GESG 187
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTRE 555
+ GT + PE + Y DV+ GV+L LL+G P T+E
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L + ++ K SR ++T ++ E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-------------- 130
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GT 178
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ + T T Y PE Y + D++S G ++ E++ G
Sbjct: 179 SFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-------------- 130
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GT 178
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-------------- 168
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 169 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GT 216
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 83
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 84 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-------------- 129
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 130 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GT 177
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 178 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYF 517
+ Y+HSA I HRD+K SN+ +++ ++ DFG +R + T T Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWYR 195
Query: 518 DPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
PE Y D++S G ++ ELL GK
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 25/228 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYK-GMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHI 392
D+Y+ LG G FG V++ G+ A K ++ E E+ +S + H +
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 393 VKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVA 452
V L + V++YE++S G L + D V
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA---------------VEYM 155
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA--KVSDFG-TSRSVPNDKTHLTTA 509
+V + +MH + H D+K NI+ K S K+ DFG T+ P +TT
Sbjct: 156 RQVCKGLCHMHENNYV---HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT- 211
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEE 557
GT + PE + +D++S GV+ LL+G P ++E
Sbjct: 212 --GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 257
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L D ++ K SR ++T ++ E+V++ +NH++
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-------------- 168
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 169 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GT 216
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKF----SAKVSDFGTSRSVPNDKTHLTTAV 510
+ V Y+H+ + HRD+K SNIL D+ S ++ DFG ++ + + L T
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC 181
Query: 511 QGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
T + PE + Y D++S GV+L +LTG P
Sbjct: 182 Y-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFA 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 90/232 (38%), Gaps = 38/232 (16%)
Query: 334 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFINEVVI 383
D Y+ LG G F V K G+ + +R+ R + + IE+ EV I
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSI 67
Query: 384 LSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
L +I H +++ L +L+ E ++ G L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA----------- 116
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGTSRSV 499
++ V Y+HS + I H D+K NI+L D K K+ DFG + +
Sbjct: 117 -----TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 169 --DFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYF 517
+ Y+HSA I HRD+K SN+ +++ ++ DFG +R + T T Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWYR 195
Query: 518 DPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
PE Y D++S G ++ ELL GK
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 31/165 (18%)
Query: 453 CEVAGAVAYMHSAASIPIFHRDIKSSNILLD-DKFSAKVSDFGTSRSVPNDKTHLTTAVQ 511
+V AV + H+ + HRDIK NIL+D ++ K+ DFG+ + K + T
Sbjct: 164 WQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFD 217
Query: 512 GTFGYFDPEYFQSSQYTDKS-DVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISLAK 570
GT Y PE+ + +Y +S V+S G++L +++ G P +EE +F
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP--FEHDEEIIRGQVFF----- 270
Query: 571 ENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQV 615
RV+ E + L CL L RPT +++
Sbjct: 271 --------RQRVSSECQ--------HLIRWCLALRPSDRPTFEEI 299
>pdb|4EBY|A Chain A, Crystal Structure Of The Ectodomain Of A Receptor Like
Kinase
pdb|4EBZ|A Chain A, Crystal Structure Of The Ectodomain Of A Receptor Like
Kinase
Length = 212
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 90 VIVPVSCSC-SGSLYQHNAPYTTKPNDTYFLVANNTYQGLTTCQALLGQNYYDEKNLGSG 148
V+VP C C G HN Y+ + DTY VA + Y LTT ++L +N + N+
Sbjct: 61 VLVPFPCECQPGDFLGHNFSYSVRQEDTYERVAISNYANLTTMESLQARNPFPATNIPLS 120
Query: 149 VELTVPIRCACATANQTENGVTYLLAYMAQAGDNMSFIGNEFGV 192
L V + C+C + +++ + Y + D++S I GV
Sbjct: 121 ATLNVLVNCSCGDESVSKD-FGLFVTYPLRPEDSLSSIARSSGV 163
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T T
Sbjct: 162 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVAT 214
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 43/252 (17%)
Query: 312 LSSCGSSEKAKIFTAEELQRAT----DNYNQSRFLGQGGFGTV---YKGMLPDGSIVAVK 364
L S S++ F + E+ +T Y + +G G G V Y +L + ++ K
Sbjct: 3 LGSMSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKK 61
Query: 365 RSRAI-DKTQIEQFINEVVILSQINHRHIVKLLGC-----CLETEVPVLVYEYISNGTLS 418
SR ++T ++ E+V++ +NH++I+ LL LE V + + + L
Sbjct: 62 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 121
Query: 419 HHIH---DHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDI 475
I DH + ++ + ++HSA I HRD+
Sbjct: 122 QVIQMELDHERMSY---------------------LLYQMLCGIKHLHSAG---IIHRDL 157
Query: 476 KSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYS 535
K SNI++ + K+ DFG +R+ + + T T Y PE Y + D++S
Sbjct: 158 KPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWS 215
Query: 536 FGVVLLELLTGK 547
G ++ E++ K
Sbjct: 216 VGCIMGEMVCHK 227
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYF 517
+ Y+HSA I HRD+K SN+ +++ ++ DFG +R + T T Y
Sbjct: 135 GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATRWYR 187
Query: 518 DPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
PE Y D++S G ++ ELL GK
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ D+G +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 99/249 (39%), Gaps = 39/249 (15%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRA----IDKTQIEQFIN 379
Q+ D Y+ LG G F V K G+ + ++SRA + + +IE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER--- 64
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL Q+ H +++ L VL+ E +S G L +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----------------AQ 108
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF----SAKVSDFGT 495
++ V Y+H+ I H D+K NI+L DK K+ DFG
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP-ICLTR 554
+ + D + GT + PE ++D++S GV+ LL+G P + T+
Sbjct: 166 AHEI-EDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
Query: 555 EEEERNLVA 563
+E N+ A
Sbjct: 224 QETLANITA 232
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 99/249 (39%), Gaps = 39/249 (15%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRA----IDKTQIEQFIN 379
Q+ D Y+ LG G F V K G+ + ++SRA + + +IE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER--- 64
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL Q+ H +++ L VL+ E +S G L +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----------------AQ 108
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF----SAKVSDFGT 495
++ V Y+H+ I H D+K NI+L DK K+ DFG
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP-ICLTR 554
+ + D + GT + PE ++D++S GV+ LL+G P + T+
Sbjct: 166 AHEI-EDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
Query: 555 EEEERNLVA 563
+E N+ A
Sbjct: 224 QETLANITA 232
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 28/187 (14%)
Query: 374 IEQFINEVVILSQINHRHIVKLLGCCLETEVPVL--VYEYISNGTLSHHIHDHXXXXXXX 431
IEQ E+ IL +++H ++VKL+ + L V+E ++ G +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME------------ 127
Query: 432 XXXXXXXXXXXXXXXNRVRVAC-EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKV 490
++ R ++ + Y+H I HRDIK SN+L+ + K+
Sbjct: 128 ------VPTLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKI 178
Query: 491 SDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQ--YTDKS-DVYSFGVVLLELLTGK 547
+DFG S L+ V GT + PE ++ ++ K+ DV++ GV L + G+
Sbjct: 179 ADFGVSNEFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
Query: 548 KPICLTR 554
P R
Sbjct: 238 CPFMDER 244
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 126/313 (40%), Gaps = 72/313 (23%)
Query: 343 GQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIVKLL-----G 397
+G FG V+K L + VAVK DK Q Q E+ + H ++++ + G
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDK-QSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 398 CCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAG 457
LE E+ L+ + G+L+ ++ + VA ++
Sbjct: 82 SNLEVEL-WLITAFHDKGSLTDYLKGNIITWNEL-----------------CHVAETMSR 123
Query: 458 AVAYMHSAASIP----------IFHRDIKSSNILLDDKFSAKVSDFGTS-RSVPNDKTHL 506
++Y+H +P I HRD KS N+LL +A ++DFG + R P
Sbjct: 124 GLSYLHE--DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGD 181
Query: 507 TTAVQGTFGYFDPEY------FQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERN 560
T GT Y PE FQ + + D+Y+ G+VL EL++ K +E
Sbjct: 182 THGQVGTRRYMAPEVLEGAINFQRDAFL-RIDMYAMGLVLWELVSRCKAADGPVDE---- 236
Query: 561 LVAYFISLAKENKLLEILDARVAKEAREEDIEAVAELAMGCLRLNSKKRPTMKQVSMDLE 620
Y + +E + + E+++ V ++ K RPT+K +
Sbjct: 237 ---YMLPFEEE----------IGQHPSLEELQEVV--------VHKKMRPTIKDHWLKHP 275
Query: 621 GLRRSQRCVEIDK 633
GL +Q CV I++
Sbjct: 276 GL--AQLCVTIEE 286
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T
Sbjct: 153 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGXVAT 205
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T
Sbjct: 129 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVAT 181
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 29/170 (17%)
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF---SAKVSDFGTSRSVPNDKTH 505
+R+ ++ V Y+H I H D+K NILL + K+ DFG SR + +
Sbjct: 134 IRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE- 189
Query: 506 LTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYF 565
+ GT Y PE T +D+++ G++ LLT P F
Sbjct: 190 -LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP---------------F 233
Query: 566 ISLAKENKLLEILDARVAKEAREEDIEAVAELA----MGCLRLNSKKRPT 611
+ + L I ++V + EE +V++LA L N +KRPT
Sbjct: 234 VGEDNQETYLNI--SQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPT 281
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 41/224 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y + +G G G V Y +L VA+K+ SR ++T ++ E+V++ +NH+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 85
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + L I DH
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY------------- 132
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 133 --------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 181
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTG 546
+ V T Y PE Y + D++S G ++ E++ G
Sbjct: 182 FMMVPFVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 90/232 (38%), Gaps = 38/232 (16%)
Query: 334 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFINEVVI 383
D Y+ LG G F V K G+ + +R+ R + + IE+ EV I
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSI 67
Query: 384 LSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
L +I H +++ L +L+ E ++ G L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA----------- 116
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGTSRSV 499
++ V Y+HS + I H D+K NI+L D K K+ DFG + +
Sbjct: 117 -----TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTHLTTAVQ 511
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 124 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 179
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y PE +Y D++S GV++ LL G P
Sbjct: 180 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFIN 379
+ D Y+ LG G F V K G+ + +R+ R + + IE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER--- 63
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL +I H +++ L +L+ E ++ G L + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA------- 116
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGT 495
++ V Y+HS + I H D+K NI+L D K K+ DFG
Sbjct: 117 ---------TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 165 AHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFIN 379
+ D Y+ LG G F V K G+ + +R+ R + + IE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER--- 63
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL +I H +++ L +L+ E ++ G L + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA------- 116
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGT 495
++ V Y+HS + I H D+K NI+L D K K+ DFG
Sbjct: 117 ---------TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 165 AHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRA----IDKTQIEQFIN 379
Q+ D Y+ LG G F V K G+ + ++SRA + + +IE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER--- 64
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL Q+ H +++ L VL+ E +S G L +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----------------AQ 108
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF----SAKVSDFGT 495
++ V Y+H+ I H D+K NI+L DK K+ DFG
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + GT + PE ++D++S GV+ LL+G P
Sbjct: 166 AHEI-EDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTHLTTAVQ 511
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 125 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 180
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y PE +Y D++S GV++ LL G P
Sbjct: 181 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 90/232 (38%), Gaps = 38/232 (16%)
Query: 334 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFINEVVI 383
D Y+ LG G F V K G+ + +R+ R + + IE+ EV I
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER---EVSI 67
Query: 384 LSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
L +I H +++ L +L+ E ++ G L + +
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA----------- 116
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGTSRSV 499
++ V Y+HS + I H D+K NI+L D K K+ DFG + +
Sbjct: 117 -----TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTHLTTAVQ 511
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 131 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 186
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y PE +Y D++S GV++ LL G P
Sbjct: 187 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTHLTTAVQ 511
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 176 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 231
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y PE +Y D++S GV++ LL G P
Sbjct: 232 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTHLTTAVQ 511
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 140 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 195
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y PE +Y D++S GV++ LL G P
Sbjct: 196 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTHLTTAVQ 511
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 130 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 185
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y PE +Y D++S GV++ LL G P
Sbjct: 186 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTHLTTAVQ 511
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 132 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 187
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y PE +Y D++S GV++ LL G P
Sbjct: 188 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRA----IDKTQIEQFIN 379
Q+ D Y+ LG G F V K G+ + ++SRA + + +IE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER--- 64
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL Q+ H +++ L VL+ E +S G L +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----------------AQ 108
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF----SAKVSDFGT 495
++ V Y+H+ I H D+K NI+L DK K+ DFG
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + GT + PE ++D++S GV+ LL+G P
Sbjct: 166 AHEI-EDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTHLTTAVQ 511
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 126 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 181
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y PE +Y D++S GV++ LL G P
Sbjct: 182 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFIN 379
+ D Y+ LG G F V K G+ + +R+ R + + IE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER--- 63
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL +I H +++ L +L+ E ++ G L + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA------- 116
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGT 495
++ V Y+HS + I H D+K NI+L D K K+ DFG
Sbjct: 117 ---------TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 165 AHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRA----IDKTQIEQFIN 379
Q+ D Y+ LG G F V K G+ + ++SRA + + +IE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER--- 64
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL Q+ H +++ L VL+ E +S G L +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----------------AQ 108
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF----SAKVSDFGT 495
++ V Y+H+ I H D+K NI+L DK K+ DFG
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + GT + PE ++D++S GV+ LL+G P
Sbjct: 166 AHEI-EDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFIN 379
+ D Y+ LG G F V K G+ + +R+ R + + IE+
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER--- 63
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL +I H +++ L +L+ E ++ G L + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA------- 116
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGT 495
++ V Y+HS + I H D+K NI+L D K K+ DFG
Sbjct: 117 ---------TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 165 AHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTHLTTAVQ 511
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 170 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 225
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y PE +Y D++S GV++ LL G P
Sbjct: 226 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
AV Y+H I HRD+K N+LL ++ K++DFG S+ + +T L + GT
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 186
Query: 515 GYFDPEYFQS---SQYTDKSDVYSFGVVLLELLTGKKPICLTR 554
Y PE S + Y D +S GV+L L+G P R
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
AV Y+H I HRD+K N+LL ++ K++DFG S+ + +T L + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 180
Query: 515 GYFDPEYFQS---SQYTDKSDVYSFGVVLLELLTGKKPICLTR 554
Y PE S + Y D +S GV+L L+G P R
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
AV Y+H I HRD+K N+LL ++ K++DFG S+ + +T L + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 180
Query: 515 GYFDPEYFQS---SQYTDKSDVYSFGVVLLELLTGKKPICLTR 554
Y PE S + Y D +S GV+L L+G P R
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DFG +R ++ T
Sbjct: 156 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGYVAT 208
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 209 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFIN 379
+ D Y+ LG G F V K G+ + +R+ R + + IE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER--- 63
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL +I H +++ L +L+ E ++ G L + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA------- 116
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGT 495
++ V Y+HS + I H D+K NI+L D K K+ DFG
Sbjct: 117 ---------TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 165 AHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTHLTTAVQ 511
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 126 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 181
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y PE +Y D++S GV++ LL G P
Sbjct: 182 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
AV Y+H I HRD+K N+LL ++ K++DFG S+ + +T L + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 180
Query: 515 GYFDPEYFQS---SQYTDKSDVYSFGVVLLELLTGKKPICLTR 554
Y PE S + Y D +S GV+L L+G P R
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
AV Y+H I HRD+K N+LL ++ K++DFG S+ + +T L + GT
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 179
Query: 515 GYFDPEYFQS---SQYTDKSDVYSFGVVLLELLTGKKPICLTR 554
Y PE S + Y D +S GV+L L+G P R
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFIN 379
+ D Y+ LG G F V K G+ + +R+ R + + IE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER--- 63
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL +I H +++ L +L+ E ++ G L + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA------- 116
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGT 495
++ V Y+HS + I H D+K NI+L D K K+ DFG
Sbjct: 117 ---------TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 165 AHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFIN 379
+ D Y+ LG G F V K G+ + +R+ R + + IE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER--- 62
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL +I H +++ L +L+ E ++ G L + +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA------- 115
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGT 495
++ V Y+HS + I H D+K NI+L D K K+ DFG
Sbjct: 116 ---------TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 164 AHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFIN 379
+ D Y+ LG G F V K G+ + +R+ R + + IE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER--- 63
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL +I H +++ L +L+ E ++ G L + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA------- 116
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGT 495
++ V Y+HS + I H D+K NI+L D K K+ DFG
Sbjct: 117 ---------TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 165 AHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS----AKVSDFGTSRSVPNDKTHLTTAV 510
+ V Y+HS + HRD+K SNIL D+ ++ DFG ++ + + L T
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 511 QGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
T + PE + Y + D++S G++L +L G P
Sbjct: 187 Y-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFA 226
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFIN 379
+ D Y+ LG G F V K G+ + +R+ R + + IE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER--- 62
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL +I H +++ L +L+ E ++ G L + +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA------- 115
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGT 495
++ V Y+HS + I H D+K NI+L D K K+ DFG
Sbjct: 116 ---------TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 164 AHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 26/220 (11%)
Query: 334 DNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRHIV 393
+ Y + LG+G FG V++ + + + + T E+ IL+ HR+I+
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 394 KLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVAC 453
L E V+++E+IS + I+ + V C
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERIN------------TSAFELNEREIVSYVHQVC 112
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA--KVSDFGTSRSV-PNDKTHLT-TA 509
E A+ ++HS I H DI+ NI+ + S+ K+ +FG +R + P D L TA
Sbjct: 113 E---ALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA 166
Query: 510 VQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y+ PE Q + +D++S G ++ LL+G P
Sbjct: 167 PE----YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKF----SAKVSDFGTSRSVPNDKTHLTTAV 510
+ V Y+H+ + HRD+K SNIL D+ S ++ DFG ++ + + L T
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 511 QGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
T + PE + Y D++S GV+L LTG P
Sbjct: 182 Y-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFA 221
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 95/238 (39%), Gaps = 38/238 (15%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGMLPDGS--IVAVK---RSRAIDKTQIEQFINEVVILSQI 387
+D Y + +G G FG V + M S +VAVK R ID+ + IN +
Sbjct: 18 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSL 72
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H +IV+ L +V EY S G L I + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN-----------------AGRFSED 115
Query: 448 RVRVACE-VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA--KVSDFGTSRSVPNDKT 504
R + + V+Y H+ + + HRD+K N LLD + K+ FG S+S
Sbjct: 116 EARFFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ 172
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDK-SDVYSFGVVLLELLTGKKPICLTREEEERNL 561
+T GT Y PE +Y K +DV+S GV L +L G P EE +N
Sbjct: 173 PKSTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNF 226
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFIN 379
+ D Y+ LG G F V K G+ + +R+ R + + IE+
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER--- 63
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL +I H +++ L +L+ E ++ G L + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA------- 116
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGT 495
++ V Y+HS + I H D+K NI+L D K K+ DFG
Sbjct: 117 ---------TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 165 AHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS----AKVSDFGTSRSVPNDKTHLTTAV 510
+ V Y+HS + HRD+K SNIL D+ ++ DFG ++ + + L T
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 511 QGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
T + PE + Y + D++S G++L +L G P
Sbjct: 187 Y-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFA 226
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ FG +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 39/224 (17%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKRSRAI-DKTQIEQFINEVVILSQINHRH 391
Y + +G G G V Y +L + ++ K SR ++T ++ E+V++ +NH++
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAIL-ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 392 IVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXXX 443
I+ LL LE V + + + L I DH
Sbjct: 79 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-------------- 124
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK 503
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 125 -------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GT 172
Query: 504 THLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
+ + T T Y PE Y + D++S G ++ E++ K
Sbjct: 173 SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
AV Y+H I HRD+K N+LL ++ K++DFG S+ + +T L + GT
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 305
Query: 515 GYFDPEYFQS---SQYTDKSDVYSFGVVLLELLTGKKPICLTR 554
Y PE S + Y D +S GV+L L+G P R
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 39/245 (15%)
Query: 334 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKR----SRAIDKTQIEQFINEVVI 383
D+Y LG G F V K G + +R R + + +IE+ EV I
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIER---EVNI 82
Query: 384 LSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
L +I H +I+ L VL+ E +S G L + +
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA----------- 131
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF----SAKVSDFGTSRSV 499
+ ++ V Y+HS I H D+K NI+L DK K+ DFG + +
Sbjct: 132 -----TQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 183
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP-ICLTREEEE 558
+ + + GT + PE ++D++S GV+ LL+G P + T++E
Sbjct: 184 --EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 241
Query: 559 RNLVA 563
N+ A
Sbjct: 242 TNISA 246
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 50/243 (20%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKR-------SRAI----DKTQIEQ 376
EL Y RF+ G +G V G+ +G VA+KR R + D ++
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 377 FINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYI----SNGTLSHHIHDHXXXXXXXX 432
+ E+ +L+ +H +I+ L + E P + Y+ L+ IHD
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD--------- 126
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAY-----MHSAASIPIFHRDIKSSNILLDDKFS 487
R+ ++ + Y +H + HRD+ NILL D
Sbjct: 127 --------------QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND 172
Query: 488 AKVSDFGTSRSVPND--KTHLTTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELL 544
+ DF +R D KTH T Y PE Q +T D++S G V+ E+
Sbjct: 173 ITICDFNLAREDTADANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
Query: 545 TGK 547
K
Sbjct: 229 NRK 231
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 95/243 (39%), Gaps = 48/243 (19%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGMLPDGS--IVAVK---RSRAIDKTQIEQFINEVVILSQI 387
+D Y + +G G FG V + M S +VAVK R ID+ + IN +
Sbjct: 18 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSL 72
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H +IV+ L +V EY S G L I + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN-----------------AGRFSED 115
Query: 448 RVRVACE-VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA--KVSDFGTSRSV----- 499
R + + V+Y H+ + + HRD+K N LLD + K+ FG S+S
Sbjct: 116 EARFFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ 172
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDK-SDVYSFGVVLLELLTGKKPICLTREEEE 558
P D GT Y PE +Y K +DV+S GV L +L G P EE
Sbjct: 173 PKDTV-------GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEP 223
Query: 559 RNL 561
+N
Sbjct: 224 KNF 226
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILL---DDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTF 514
AV Y+H I HRD+K N+LL ++ K++DFG S+ + +T L + GT
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTP 319
Query: 515 GYFDPEYFQS---SQYTDKSDVYSFGVVLLELLTGKKPICLTR 554
Y PE S + Y D +S GV+L L+G P R
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 362
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 39/245 (15%)
Query: 334 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKR----SRAIDKTQIEQFINEVVI 383
D+Y LG G F V K G + +R R + + +IE+ EV I
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER---EVNI 68
Query: 384 LSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
L +I H +I+ L VL+ E +S G L + +
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA----------- 117
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF----SAKVSDFGTSRSV 499
+ ++ V Y+HS I H D+K NI+L DK K+ DFG + +
Sbjct: 118 -----TQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 169
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP-ICLTREEEE 558
+ + + GT + PE ++D++S GV+ LL+G P + T++E
Sbjct: 170 --EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 227
Query: 559 RNLVA 563
N+ A
Sbjct: 228 TNISA 232
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 50/243 (20%)
Query: 328 ELQRATDNYNQSRFLGQGGFGTVYKGMLPDGSIVAVKR-------SRAI----DKTQIEQ 376
EL Y RF+ G +G V G+ +G VA+KR R + D ++
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 377 FINEVVILSQINHRHIVKLLGCCLETEVPVLVYEYI----SNGTLSHHIHDHXXXXXXXX 432
+ E+ +L+ +H +I+ L + E P + Y+ L+ IHD
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD--------- 126
Query: 433 XXXXXXXXXXXXXXNRVRVACEVAGAVAY-----MHSAASIPIFHRDIKSSNILLDDKFS 487
R+ ++ + Y +H + HRD+ NILL D
Sbjct: 127 --------------QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND 172
Query: 488 AKVSDFGTSRSVPND--KTHLTTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLLELL 544
+ DF +R D KTH T Y PE Q +T D++S G V+ E+
Sbjct: 173 ITICDFNLAREDTADANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
Query: 545 TGK 547
K
Sbjct: 229 NRK 231
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 39/245 (15%)
Query: 334 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKR----SRAIDKTQIEQFINEVVI 383
D+Y LG G F V K G + +R R + + +IE+ EV I
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER---EVNI 61
Query: 384 LSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXX 443
L +I H +I+ L VL+ E +S G L + +
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA----------- 110
Query: 444 XXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF----SAKVSDFGTSRSV 499
+ ++ V Y+HS I H D+K NI+L DK K+ DFG + +
Sbjct: 111 -----TQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162
Query: 500 PNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP-ICLTREEEE 558
+ + + GT + PE ++D++S GV+ LL+G P + T++E
Sbjct: 163 --EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL 220
Query: 559 RNLVA 563
N+ A
Sbjct: 221 TNISA 225
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 93/228 (40%), Gaps = 31/228 (13%)
Query: 332 ATDNYNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQ--IEQFINEVVILSQIN 388
+ D Y + LG+G +G VYK + VA+KR R + + I EV +L ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 389 HRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNR 448
HR+I++L L++EY N L ++ +
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEND-LKKYMDKNPDVSMRVIKS-------------- 136
Query: 449 VRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA-----KVSDFGTSRSVPNDK 503
++ V + HS + HRD+K N+LL ++ K+ DFG +R+
Sbjct: 137 --FLYQLINGVNFCHSRRCL---HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI 191
Query: 504 THLTTAVQGTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGKKPI 550
T + T Y PE S+ Y+ D++S + E+L K P+
Sbjct: 192 RQFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM-KTPL 237
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 38/236 (16%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRS----RAIDKTQIEQFIN 379
+ D Y+ LG G F V K G+ + +R+ R + + IE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER--- 63
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL +I H +++ L +L+ E ++ G L + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEA------- 116
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDD----KFSAKVSDFGT 495
++ V Y+HS + I H D+K NI+L D K K+ DFG
Sbjct: 117 ---------TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPIC 551
+ + D + + GT + PE ++D++S GV+ LL+G P
Sbjct: 165 AHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 92/237 (38%), Gaps = 36/237 (15%)
Query: 333 TDNYNQSRFLGQGGFGTVYKGMLPDGS--IVAVK---RSRAIDKTQIEQFINEVVILSQI 387
+D Y + +G G FG V + M S +VAVK R I + IN +
Sbjct: 18 SDRYELVKDIGSGNFG-VARLMRDKQSNELVAVKYIERGEKIAANVKREIINH----RSL 72
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H +IV+ L +V EY S G L I +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---------- 122
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA--KVSDFGTSRSVPNDKTH 505
++ V+Y H+ + + HRD+K N LLD + K+ DFG S+S
Sbjct: 123 ------QLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 173
Query: 506 LTTAVQGTFGYFDPEYFQSSQYTDK-SDVYSFGVVLLELLTGKKPICLTREEEERNL 561
+T GT Y PE +Y K +DV+S GV L +L G P EE +N
Sbjct: 174 KSTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP--FEDPEEPKNF 226
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ D G +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 99/249 (39%), Gaps = 39/249 (15%)
Query: 330 QRATDNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRA----IDKTQIEQFIN 379
Q+ D Y+ LG G F V K G+ + ++SRA + + +IE+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIER--- 64
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
EV IL Q+ H +I+ L VL+ E +S G L +
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK-- 122
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKF----SAKVSDFGT 495
++ V Y+H+ I H D+K NI+L DK K+ DFG
Sbjct: 123 --------------QILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 496 SRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP-ICLTR 554
+ + D + GT + PE ++D++S GV+ LL+G P + T+
Sbjct: 166 AHEI-EDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
Query: 555 EEEERNLVA 563
+E N+ A
Sbjct: 224 QETLANITA 232
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ D G +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ DF +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYF 517
+ Y+HSA + HRD+K N+ +++ K+ DFG +R + T T Y
Sbjct: 156 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYR 208
Query: 518 DPEYFQSS-QYTDKSDVYSFGVVLLELLTGK 547
PE S Y D++S G ++ E+LTGK
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILL--DDKFSAKVSDFGTSR---SVPNDKTHLTT 508
++ A+ Y+H+ I HRDIK N L + F K+ DFG S+ + N + + T
Sbjct: 176 QIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMT 232
Query: 509 AVQGTFGYFDPEYFQSSQ--YTDKSDVYSFGVVLLELLTGKKPI 550
GT + PE ++ Y K D +S GV+L LL G P
Sbjct: 233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA I HRD+K SN+ +++ K+ D G +R ++ T T
Sbjct: 133 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARHTDDE----MTGYVAT 185
Query: 514 FGYFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE Y D++S G ++ ELLTG+
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGT 513
++ + Y+HSA + HRD+K N+ +++ K+ DFG +R + T T
Sbjct: 134 QMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----T 186
Query: 514 FGYFDPEYFQSS-QYTDKSDVYSFGVVLLELLTGK 547
Y PE S Y D++S G ++ E+LTGK
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTHLTTAVQ 511
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LT
Sbjct: 124 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCY 179
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y PE +Y D++S GV++ LL G P
Sbjct: 180 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 45/244 (18%)
Query: 336 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQF----INEVVILSQINHR 390
Y + +GQG FG V+K G VA+K+ + + + E F + E+ IL + H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKILQLLKHE 77
Query: 391 HIVKLLGCCLETEVPV--------LVYEYISN---GTLSHHIHDHXXXXXXXXXXXXXXX 439
++V L+ C P LV+++ + G LS+ +
Sbjct: 78 NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK--------- 128
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS- 498
RV + + Y+H I HRD+K++N+L+ K++DFG +R+
Sbjct: 129 ----------RVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 499 --VPNDKTHLTTAVQGTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGKKPICLTRE 555
N + + T Y PE + Y D++ G ++ E+ T + PI
Sbjct: 176 SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 234
Query: 556 EEER 559
E+ +
Sbjct: 235 EQHQ 238
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 45/244 (18%)
Query: 336 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQF----INEVVILSQINHR 390
Y + +GQG FG V+K G VA+K+ + + + E F + E+ IL + H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKILQLLKHE 77
Query: 391 HIVKLLGCCLETEVPV--------LVYEYISN---GTLSHHIHDHXXXXXXXXXXXXXXX 439
++V L+ C P LV+++ + G LS+ +
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK--------- 128
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS- 498
RV + + Y+H I HRD+K++N+L+ K++DFG +R+
Sbjct: 129 ----------RVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 499 --VPNDKTHLTTAVQGTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGKKPICLTRE 555
N + + T Y PE + Y D++ G ++ E+ T + PI
Sbjct: 176 SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNT 234
Query: 556 EEER 559
E+ +
Sbjct: 235 EQHQ 238
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 45/235 (19%)
Query: 336 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQF----INEVVILSQINHR 390
Y + +GQG FG V+K G VA+K+ + + + E F + E+ IL + H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKILQLLKHE 77
Query: 391 HIVKLLGCCLETEVPV--------LVYEYISN---GTLSHHIHDHXXXXXXXXXXXXXXX 439
++V L+ C P LV+++ + G LS+ +
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK--------- 128
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS- 498
RV + + Y+H I HRD+K++N+L+ K++DFG +R+
Sbjct: 129 ----------RVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 175
Query: 499 --VPNDKTHLTTAVQGTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGKKPI 550
N + + T Y PE + Y D++ G ++ E+ T + PI
Sbjct: 176 SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 45/235 (19%)
Query: 336 YNQSRFLGQGGFGTVYKGM-LPDGSIVAVKRSRAIDKTQIEQF----INEVVILSQINHR 390
Y + +GQG FG V+K G VA+K+ + + + E F + E+ IL + H
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKILQLLKHE 76
Query: 391 HIVKLLGCCLETEVPV--------LVYEYISN---GTLSHHIHDHXXXXXXXXXXXXXXX 439
++V L+ C P LV+++ + G LS+ +
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK--------- 127
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRS- 498
RV + + Y+H I HRD+K++N+L+ K++DFG +R+
Sbjct: 128 ----------RVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF 174
Query: 499 --VPNDKTHLTTAVQGTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGKKPI 550
N + + T Y PE + Y D++ G ++ E+ T + PI
Sbjct: 175 SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 461 YMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPE 520
Y+H+A I HRD+K N+ +++ K+ DFG +R ++ T Y PE
Sbjct: 143 YIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAPE 195
Query: 521 Y-FQSSQYTDKSDVYSFGVVLLELLTGK 547
+YT D++S G ++ E++TGK
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 455 VAGAVAYMHSAASIPIFHRDIKSSNILLDDKFS---AKVSDFGTSRSVPNDKTHLTTAVQ 511
+ A+ Y+HS I I HRD+K N+L K K++DFG ++ + + LTT
Sbjct: 170 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCY 225
Query: 512 GTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKP 549
+ Y PE +Y D +S GV+ LL G P
Sbjct: 226 TPY-YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPP 262
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 28/146 (19%)
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL--DDKFSAK-----------VSDF 493
N + + ++A VA++HS + I HRD+K NIL+ +F+A +SDF
Sbjct: 116 NPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 494 GTSRSVPNDKTHLTTAVQ---GTFGYFDPEYFQSS-------QYTDKSDVYSFGVVLLEL 543
G + + + ++ T + GT G+ PE + S + T D++S G V +
Sbjct: 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 544 LT-GKKPICLTREEEERNLVAYFISL 568
L+ GK P + E N++ SL
Sbjct: 233 LSKGKHPFG-DKYSRESNIIRGIFSL 257
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 41/225 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y + +G G G V Y +L VA+K+ SR ++T ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + L I DH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY------------- 130
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 --------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
V T Y PE Y + D++S G ++ E++ K
Sbjct: 180 FMMEPEVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 35/159 (22%)
Query: 407 LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
LV+E + G++ HIH V +VA A+ ++H+
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV----------------VVQDVASALDFLHNKG 131
Query: 467 SIPIFHRDIKSSNILLDDK---FSAKVSDFGTSRSV-------PNDKTHLTTAVQGTFGY 516
I HRD+K NIL + K+ DFG + P L T G+ Y
Sbjct: 132 ---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC-GSAEY 187
Query: 517 FDPEYFQS-----SQYTDKSDVYSFGVVLLELLTGKKPI 550
PE ++ S Y + D++S GV+L LL+G P
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 41/225 (18%)
Query: 336 YNQSRFLGQGGFGTV---YKGMLPDGSIVAVKR-SRAI-DKTQIEQFINEVVILSQINHR 390
Y + +G G G V Y +L VA+K+ SR ++T ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 391 HIVKLLGC-----CLETEVPVLVYEYISNGTLSHHIH---DHXXXXXXXXXXXXXXXXXX 442
+I+ LL LE V + + + L I DH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY------------- 130
Query: 443 XXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPND 502
+ ++ + ++HSA I HRD+K SNI++ + K+ DFG +R+
Sbjct: 131 --------LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 503 KTHLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGK 547
V T Y PE Y + D++S G ++ E++ K
Sbjct: 180 FMMEPEVV--TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL--DDKFSAK-----------VSDF 493
N + + ++A VA++HS + I HRD+K NIL+ +F+A +SDF
Sbjct: 134 NPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 494 GTSRSVPNDKTHLTTAVQ---GTFGYFDPEYFQSS---QYTDKSDVYSFGVVLLELLT-G 546
G + + + + + GT G+ PE + S + T D++S G V +L+ G
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 547 KKPICLTREEEERNLVAYFISL 568
K P + E N++ SL
Sbjct: 251 KHPFG-DKYSRESNIIRGIFSL 271
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL--DDKFSAK-----------VSDF 493
N + + ++A VA++HS + I HRD+K NIL+ +F+A +SDF
Sbjct: 134 NPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 494 GTSRSVPNDKTHLTTAVQ---GTFGYFDPEYFQSS---QYTDKSDVYSFGVVLLELLT-G 546
G + + + + + GT G+ PE + S + T D++S G V +L+ G
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 547 KKPICLTREEEERNLVAYFISL 568
K P + E N++ SL
Sbjct: 251 KHPFG-DKYSRESNIIRGIFSL 271
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 454 EVAGAVAYMHSAASIPIFHRDIKSSNILL----DDKFSAKVSDFGTSR--SVPNDKTHLT 507
++ + Y+H+ + HRD+K +NIL+ ++ K++D G +R + P
Sbjct: 136 QILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 508 TAVQGTFGYFDPEYFQSSQ-YTDKSDVYSFGVVLLELLTGKKPICLTREEE 557
V TF Y PE ++ YT D+++ G + ELLT +PI R+E+
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFHCRQED 242
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQGTFGYF 517
A+A++HS + H D+K +NI L + K+ DFG V +G Y
Sbjct: 169 ALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYM 223
Query: 518 DPEYFQSSQYTDKSDVYSFGVVLLEL 543
PE Q S Y +DV+S G+ +LE+
Sbjct: 224 APELLQGS-YGTAADVFSLGLTILEV 248
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 458 AVAYMHSAASIPIFHRDIKSSNILLDDKFSA-KVSDFGTSRS-VPNDKTHLTTAVQGTFG 515
AV ++HS I HRDIK N+L++ K + K+ DFG+++ +P++ + A +
Sbjct: 153 AVGFIHSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAXICSRF 206
Query: 516 YFDPE-YFQSSQYTDKSDVYSFGVVLLELLTGK 547
Y PE +++YT D++S G V EL+ GK
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 94/247 (38%), Gaps = 45/247 (18%)
Query: 331 RATDNYNQSRFLGQGGFGTVYKGMLPDGSI-VAVKRSRAI--DKTQIEQFINEVVILSQI 387
+ DNY +G+G +G VY + + VA+K+ + D ++ + E+ IL+++
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
+I++L + ++ YI I D N
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIV-----LEIADSDLKKLFKTPIFLTEQHVKTILYN 139
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDK---- 503
+ ++H + I HRD+K +N LL+ S K+ DFG +R++ +DK
Sbjct: 140 -------LLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHI 189
Query: 504 ---------------------THLTTAVQGTFGYFDPEY-FQSSQYTDKSDVYSFGVVLL 541
LT+ V T Y PE YT+ D++S G +
Sbjct: 190 VNDLEEKEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIFA 248
Query: 542 ELLTGKK 548
ELL K
Sbjct: 249 ELLNMMK 255
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 470 IFHRDIKSSNILLDDKFSA--KVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQY 527
I H D+K NILL + + KV DFG+S + + T +Q F Y PE ++Y
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRF-YRAPEVILGARY 276
Query: 528 TDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISL 568
D++S G +L ELLTG L E+E + +A I L
Sbjct: 277 GMPIDMWSLGCILAELLTG---YPLLPGEDEGDQLACMIEL 314
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 470 IFHRDIKSSNILLDDKFSA--KVSDFGTSRSVPNDKTHLTTAVQGTFGYFDPEYFQSSQY 527
I H D+K NILL + + KV DFG+S + + T +Q F Y PE ++Y
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRF-YRAPEVILGARY 276
Query: 528 TDKSDVYSFGVVLLELLTGKKPICLTREEEERNLVAYFISL 568
D++S G +L ELLTG L E+E + +A I L
Sbjct: 277 GMPIDMWSLGCILAELLTG---YPLLPGEDEGDQLACMIEL 314
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 85/218 (38%), Gaps = 33/218 (15%)
Query: 342 LGQGGFGTVYKGMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQINHRH--IVKLLGCC 399
+G+G +G V++G+ G VAVK + D+ + + E I + + RH I+ +
Sbjct: 16 VGKGRYGEVWRGLW-HGESVAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 400 LETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAV 459
+ + I+ H H+H +R+A A +
Sbjct: 72 MTSRNSSTQLWLIT------HYHEHGSLYDFLQRQTLEPHLA-------LRLAVSAACGL 118
Query: 460 AYMH-----SAASIPIFHRDIKSSNILLDDKFSAKVSDFGTSRSVPNDKTHLTTAVQ--- 511
A++H + I HRD KS N+L+ ++D G + +L
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV 178
Query: 512 GTFGYFDPEYFQSSQYTD------KSDVYSFGVVLLEL 543
GT Y PE TD +D+++FG+VL E+
Sbjct: 179 GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 28/146 (19%)
Query: 447 NRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL--DDKFSAK-----------VSDF 493
N + + ++A VA++HS + I HRD+K NIL+ +F+A +SDF
Sbjct: 116 NPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 494 GTSRSVPNDKTHLTTAVQ---GTFGYFDPEYFQSS-------QYTDKSDVYSFGVVLLEL 543
G + + + + + GT G+ PE + S + T D++S G V +
Sbjct: 173 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 544 LT-GKKPICLTREEEERNLVAYFISL 568
L+ GK P + E N++ SL
Sbjct: 233 LSKGKHPFG-DKYSRESNIIRGIFSL 257
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 33/158 (20%)
Query: 407 LVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXNRVRVACEVAGAVAYMHSAA 466
LV+E + G++ HIH V +VA A+ ++H+
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV----------------VVQDVASALDFLHNKG 131
Query: 467 SIPIFHRDIKSSNILLDDK---FSAKVSDF--GTSRSVPNDKTHLTTAVQ----GTFGYF 517
I HRD+K NIL + K+ DF G+ + D + ++T G+ Y
Sbjct: 132 ---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 518 DPEYFQS-----SQYTDKSDVYSFGVVLLELLTGKKPI 550
PE ++ S Y + D++S GV+L LL+G P
Sbjct: 189 APEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 86/231 (37%), Gaps = 25/231 (10%)
Query: 334 DNYNQSRFLGQGGFGTVYK------GMLPDGSIVAVKRSRAIDKTQIEQFINEVVILSQI 387
D Y +G+G F V + G IV V + + E E I +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 388 NHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXXXXXXXXXN 447
H HIV+LL + +V+E++ L I +
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI---------VKRADAGFVYSEAVASH 136
Query: 448 RVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILLDDKFSA---KVSDFGTSRSVPNDKT 504
+R ++ A+ Y H I HRD+K +LL K ++ K+ FG + + +
Sbjct: 137 YMR---QILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-GESG 189
Query: 505 HLTTAVQGTFGYFDPEYFQSSQYTDKSDVYSFGVVLLELLTGKKPICLTRE 555
+ GT + PE + Y DV+ GV+L LL+G P T+E
Sbjct: 190 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 23/163 (14%)
Query: 326 AEELQRATDNYNQSRFLGQGGFGTVYKGMLP-DGSIVAVKRSR-----AIDKTQIEQFIN 379
AE R T +++ +G G FG+V+K + DG I A+KRS+ ++D+ + +
Sbjct: 1 AEMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVY 60
Query: 380 EVVILSQINHRHIVKLLGCCLETEVPVLVYEYISNGTLSHHIHDHXXXXXXXXXXXXXXX 439
+L Q H H+V+ E + ++ EY + G+L+ I ++
Sbjct: 61 AHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD- 117
Query: 440 XXXXXXXNRVRVACEVAGAVAYMHSAASIPIFHRDIKSSNILL 482
+ +V + Y+H S+ + H DIK SNI +
Sbjct: 118 -----------LLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,063,318
Number of Sequences: 62578
Number of extensions: 678222
Number of successful extensions: 4453
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 1794
Number of HSP's gapped (non-prelim): 1524
length of query: 633
length of database: 14,973,337
effective HSP length: 105
effective length of query: 528
effective length of database: 8,402,647
effective search space: 4436597616
effective search space used: 4436597616
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)