Query 039737
Match_columns 144
No_of_seqs 46 out of 48
Neff 3.4
Searched_HMMs 13730
Date Mon Mar 25 22:12:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039737.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039737hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1urua_ a.238.1.1 (A:) Amphiph 52.8 28 0.0021 23.2 13.8 67 35-101 12-79 (217)
2 d1gs9a_ a.24.1.1 (A:) Apolipop 49.5 32 0.0023 22.9 12.3 102 39-140 11-125 (144)
3 d1ud0a_ a.8.4.1 (A:) DnaK {Rat 47.9 6.1 0.00044 24.9 2.7 24 118-141 54-77 (84)
4 d1jiga_ a.25.1.1 (A:) Dodecame 44.3 37 0.0027 22.1 10.2 72 66-140 48-136 (146)
5 d2pila_ d.24.1.1 (A:) Pilin Gc 42.0 18 0.0013 22.6 4.3 20 24-43 11-30 (158)
6 d1eq1a_ a.63.1.1 (A:) Apolipop 40.8 39 0.0028 24.2 6.6 20 87-106 81-100 (166)
7 d1nkpa_ a.38.1.1 (A:) Myc prot 38.7 40 0.0029 20.8 6.1 35 89-123 47-81 (88)
8 d1xcga1 a.87.1.1 (A:714-941) R 33.8 64 0.0047 21.8 7.2 35 87-122 191-225 (228)
9 d1seta1 a.2.7.1 (A:1-110) Sery 31.8 58 0.0042 20.6 7.2 29 110-138 66-94 (110)
10 d2spca_ a.7.1.1 (A:) Spectrin 29.4 29 0.0021 20.8 3.7 7 79-85 31-37 (107)
11 d2jf2a1 b.81.1.1 (A:1-262) UDP 28.3 29 0.0021 25.3 4.1 47 86-132 205-251 (262)
12 d2fjca1 a.25.1.1 (A:27-177) Do 28.2 73 0.0053 20.7 8.6 16 65-80 50-65 (151)
13 d2c1xa1 c.87.1.10 (A:7-456) UD 27.1 50 0.0036 23.6 5.2 34 68-101 412-446 (450)
14 d1a87a_ f.1.1.1 (A:) Colicin N 25.8 90 0.0066 24.6 6.8 56 27-84 81-140 (297)
15 d2acva1 c.87.1.10 (A:3-463) Tr 24.2 95 0.0069 21.8 6.2 29 75-103 413-441 (461)
16 d1n1qa_ a.25.1.1 (A:) Dodecame 23.4 91 0.0066 20.2 8.7 48 91-140 92-139 (149)
17 d1nlwa_ a.38.1.1 (A:) Mad prot 23.1 74 0.0054 19.0 5.8 45 78-122 22-75 (79)
18 d3cx5d2 f.23.11.1 (D:261-307) 22.8 43 0.0031 19.7 3.3 23 23-45 12-36 (47)
19 d2bykb1 a.22.1.3 (B:11-99) Chr 22.5 84 0.0061 19.4 5.7 54 81-139 11-80 (89)
20 d2c1xa1 c.87.1.10 (A:7-456) UD 21.0 36 0.0026 24.5 3.3 35 35-69 407-445 (450)
21 d1ppjd2 f.23.11.1 (D:196-241) 20.9 49 0.0036 19.2 3.3 23 23-45 12-36 (46)
22 d1ji5a_ a.25.1.1 (A:) Dodecame 20.1 1.1E+02 0.0077 19.6 10.2 44 95-140 89-132 (142)
23 d1ykhb1 a.252.1.1 (B:2-130) RN 20.0 1.2E+02 0.0088 20.3 8.2 48 73-120 69-117 (129)
No 1
>d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=52.77 E-value=28 Score=23.15 Aligned_cols=67 Identities=10% Similarity=0.210 Sum_probs=51.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCcchHHHHHHHHHHHH
Q 039737 35 PFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVEKVATVAENVSAEVAEIL-PDHTKFKDAALFVERVAK 101 (144)
Q Consensus 35 Pf~~~kw~~l~~ie~evE~vie~vE~vaEvVE~VAe~tEKvAeevA~~l-PengkLk~aA~~VE~vae 101 (144)
+.|...+..+..++..+..++..+..-...+...+.....++..+.+-. |..+.........+.+.+
T Consensus 12 ~~fe~~~~~~~~~e~~l~~l~k~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 79 (217)
T d1urua_ 12 EIFDDHLNNFNRQQASANRLQKEFNNYIRCVRAAQAASKTLMDSVCEIYEPQWSGYDALQAQTGASES 79 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHH
Confidence 4577788899999999999999999999999999999999999988753 333444444444444443
No 2
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=49.54 E-value=32 Score=22.89 Aligned_cols=102 Identities=14% Similarity=0.164 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHhhCCCC-cch-HHHHHHHHHHHHHHHhhHHHH
Q 039737 39 QKWEKLKQIEGEAEMVIEEVE------KAAEVVEKVATVAENVSAEVAEILPDH-TKF-KDAALFVERVAKETAHDAQLT 110 (144)
Q Consensus 39 ~kw~~l~~ie~evE~vie~vE------~vaEvVE~VAe~tEKvAeevA~~lPen-gkL-k~aA~~VE~vae~v~~dA~~a 110 (144)
++|.-+..+.+.++.+++... .+..-+.+..+....-++++..+|--. .-+ .+....++.+-..+..+.+.+
T Consensus 11 ~f~~y~~~l~~~a~~~~~~l~~sel~~el~~~l~e~~~~l~~~~~~l~~~l~p~~~e~~~~l~~~~e~lr~~l~~~lee~ 90 (144)
T d1gs9a_ 11 RFWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQARLGADMEDV 90 (144)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 456667888888777766543 122223333333333334444555332 222 233445555556666666666
Q ss_pred HHHHH-hHHHHHHhH----HHHHHhhhhHHHHHHh
Q 039737 111 ENFIH-KVDEVKQDI----NDLEKLVEPVVDKFVE 140 (144)
Q Consensus 111 e~~I~-KVeei~~~i----d~~e~~Vepvid~~~k 140 (144)
..-+. .+++++.++ +++..-+.|.++++.+
T Consensus 91 r~kl~~~~eel~~~~~~~~ee~r~~l~p~~eel~~ 125 (144)
T d1gs9a_ 91 RGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRK 125 (144)
T ss_dssp HHHHHHHHHHHHTSTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55443 556655544 4888888888888754
No 3
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=47.94 E-value=6.1 Score=24.87 Aligned_cols=24 Identities=25% Similarity=0.620 Sum_probs=18.7
Q ss_pred HHHHHhHHHHHHhhhhHHHHHHhh
Q 039737 118 DEVKQDINDLEKLVEPVVDKFVEE 141 (144)
Q Consensus 118 eei~~~id~~e~~Vepvid~~~k~ 141 (144)
++++++.++|+..+.||+.++-++
T Consensus 54 ee~~~k~~eLe~~~~PI~~k~y~~ 77 (84)
T d1ud0a_ 54 EEFEHQQKELEKVCNPIITKLYQS 77 (84)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
Confidence 556667778889999999998554
No 4
>d1jiga_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-2 [TaxId: 1392]}
Probab=44.27 E-value=37 Score=22.10 Aligned_cols=72 Identities=10% Similarity=0.112 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHH--hhCCCCcchHHHH---------------HHHHHHHHHHHhhHHHHHHHHHhHHHHHHhHHHHH
Q 039737 66 EKVATVAENVSAEVA--EILPDHTKFKDAA---------------LFVERVAKETAHDAQLTENFIHKVDEVKQDINDLE 128 (144)
Q Consensus 66 E~VAe~tEKvAeevA--~~lPengkLk~aA---------------~~VE~vae~v~~dA~~ae~~I~KVeei~~~id~~e 128 (144)
+.+.+.++.+|+.+. +..|. |++.+.. ..+..+.+.-..-......+|+..++..+. -..
T Consensus 48 ~~~~~~~D~iAERi~~lgg~p~-~~~~~~~~~s~i~e~~~~~~~~~~l~~ll~~~~~~~~~~r~~i~~a~~~~D~--~t~ 124 (146)
T d1jiga_ 48 NEAGTYIDELAERILALEGKPL-ATMKEYLATSSVNEGTSKESAEEMVQTLVNDYSALIQELKEGMEVAGEAGDA--TSA 124 (146)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCC-CCHHHHHHHCCSCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH--HHH
T ss_pred HHHHHHHHHHHHHHHHccCCCc-cCHHHHhhcCcCccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--hHH
Confidence 444555555555554 33343 4444433 345555555554455555555555544332 234
Q ss_pred HhhhhHHHHHHh
Q 039737 129 KLVEPVVDKFVE 140 (144)
Q Consensus 129 ~~Vepvid~~~k 140 (144)
.+++.+++.++|
T Consensus 125 dll~~~~~~~Ek 136 (146)
T d1jiga_ 125 DMLLAIHTTLEQ 136 (146)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 556666666555
No 5
>d2pila_ d.24.1.1 (A:) Pilin Gc {Neisseria gonorrhoeae [TaxId: 485]}
Probab=41.96 E-value=18 Score=22.57 Aligned_cols=20 Identities=20% Similarity=0.388 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhhhhHHHHHH
Q 039737 24 WILGSILSLLLPFWKQKWEK 43 (144)
Q Consensus 24 wvlG~il~~~vPf~~~kw~~ 43 (144)
-|+|.+.++++|-|.+...+
T Consensus 11 aIIgILaaia~P~~~~~~~~ 30 (158)
T d2pila_ 11 AIVGILAAVALPAYQDYTAR 30 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999976543
No 6
>d1eq1a_ a.63.1.1 (A:) Apolipophorin-III {Manduca sexta [TaxId: 7130]}
Probab=40.81 E-value=39 Score=24.18 Aligned_cols=20 Identities=5% Similarity=0.144 Sum_probs=11.6
Q ss_pred cchHHHHHHHHHHHHHHHhh
Q 039737 87 TKFKDAALFVERVAKETAHD 106 (144)
Q Consensus 87 gkLk~aA~~VE~vae~v~~d 106 (144)
+.|..+|..+..+++++.+.
T Consensus 81 ~nle~~Aeelrk~~e~ikq~ 100 (166)
T d1eq1a_ 81 QNVEKTAEELRKAHPDVEKE 100 (166)
T ss_dssp HHHHHHHHGGGGCSHHHHHT
T ss_pred HHHHHHHHHHHHhhHHHHHH
Confidence 45555666666666666555
No 7
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.68 E-value=40 Score=20.81 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHh
Q 039737 89 FKDAALFVERVAKETAHDAQLTENFIHKVDEVKQD 123 (144)
Q Consensus 89 Lk~aA~~VE~vae~v~~dA~~ae~~I~KVeei~~~ 123 (144)
|++|+.+|.++-+.+..--...+.+-.+.+.+.++
T Consensus 47 L~~A~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~ 81 (88)
T d1nkpa_ 47 LKKATAYILSVQAEEQKLISEEDLLRKRREQLKHK 81 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777777777766554444333343344333333
No 8
>d1xcga1 a.87.1.1 (A:714-941) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.76 E-value=64 Score=21.80 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=16.8
Q ss_pred cchHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHH
Q 039737 87 TKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQ 122 (144)
Q Consensus 87 gkLk~aA~~VE~vae~v~~dA~~ae~~I~KVeei~~ 122 (144)
..|.+|...++.++..+.+.....+. .+|+.++.+
T Consensus 191 ~~l~~a~~~~~~~~~~in~~~~~~e~-~~~l~~l~~ 225 (228)
T d1xcga1 191 EKLCRARDQCREILKYVNEAVKQTEN-RHRLEGYQK 225 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 44555555555555555544444333 233444443
No 9
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=31.77 E-value=58 Score=20.64 Aligned_cols=29 Identities=14% Similarity=0.271 Sum_probs=19.5
Q ss_pred HHHHHHhHHHHHHhHHHHHHhhhhHHHHH
Q 039737 110 TENFIHKVDEVKQDINDLEKLVEPVVDKF 138 (144)
Q Consensus 110 ae~~I~KVeei~~~id~~e~~Vepvid~~ 138 (144)
.+.++.++..+++++++++.-...+-+++
T Consensus 66 ~~~l~~~~k~lk~~i~~le~~~~~~~~~l 94 (110)
T d1seta1 66 KEALIARGKALGEEAKRLEEALREKEARL 94 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567777777777777777666665554
No 10
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]}
Probab=29.44 E-value=29 Score=20.76 Aligned_cols=7 Identities=14% Similarity=-0.197 Sum_probs=2.8
Q ss_pred HHhhCCC
Q 039737 79 VAEILPD 85 (144)
Q Consensus 79 vA~~lPe 85 (144)
++..++.
T Consensus 31 ~g~d~~~ 37 (107)
T d2spca_ 31 DANAGGN 37 (107)
T ss_dssp HHCCCSC
T ss_pred CCCCHHH
Confidence 3444433
No 11
>d2jf2a1 b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltransferase {Escherichia coli, gene lpxA [TaxId: 562]}
Probab=28.32 E-value=29 Score=25.25 Aligned_cols=47 Identities=6% Similarity=0.117 Sum_probs=34.7
Q ss_pred CcchHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHhHHHHHHhhh
Q 039737 86 HTKFKDAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVE 132 (144)
Q Consensus 86 ngkLk~aA~~VE~vae~v~~dA~~ae~~I~KVeei~~~id~~e~~Ve 132 (144)
+|.+++....+.++-+.+-+.-...++++.++++.+++..++..|++
T Consensus 205 ~g~~~e~i~~lk~~~k~L~~~~~~l~~~~~~l~~~~~~~~~v~~~i~ 251 (262)
T d2jf2a1 205 RGFSREAITAIRNAYKLIYRSGKTLDEVKPEIAELAETYPEVKAFTD 251 (262)
T ss_dssp TTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhccCCHHHHHHHH
Confidence 46677777888888888777777888888888888776555555554
No 12
>d2fjca1 a.25.1.1 (A:27-177) Dodecameric ferritin homolog {Treponema pallidum, TpF1 [TaxId: 160]}
Probab=28.17 E-value=73 Score=20.67 Aligned_cols=16 Identities=6% Similarity=0.152 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHH
Q 039737 65 VEKVATVAENVSAEVA 80 (144)
Q Consensus 65 VE~VAe~tEKvAeevA 80 (144)
.+.+.+.++++||.+.
T Consensus 50 y~~~~~~~D~iAERi~ 65 (151)
T d2fjca1 50 YVSVTEAFDTIAERLL 65 (151)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445555555555554
No 13
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}
Probab=27.11 E-value=50 Score=23.63 Aligned_cols=34 Identities=12% Similarity=0.190 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHhhC-CCCcchHHHHHHHHHHHH
Q 039737 68 VATVAENVSAEVAEIL-PDHTKFKDAALFVERVAK 101 (144)
Q Consensus 68 VAe~tEKvAeevA~~l-PengkLk~aA~~VE~vae 101 (144)
.+..+.++.+..-..+ |++++++.++..||++++
T Consensus 412 ~~~r~~~l~~~~~~a~~~~gss~~~~~~~~e~v~r 446 (450)
T d2c1xa1 412 LRENLRALRETADRAVGPKGSSTENFITLVDLVSK 446 (450)
T ss_dssp HHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhh
Confidence 3444444444333334 555669999999999874
No 14
>d1a87a_ f.1.1.1 (A:) Colicin N {Escherichia coli [TaxId: 562]}
Probab=25.76 E-value=90 Score=24.55 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=30.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhhCC
Q 039737 27 GSILSLLLPFWKQKWEKLKQIEGEAEMVIEEVEKAAEVVE----KVATVAENVSAEVAEILP 84 (144)
Q Consensus 27 G~il~~~vPf~~~kw~~l~~ie~evE~vie~vE~vaEvVE----~VAe~tEKvAeevA~~lP 84 (144)
|++=.++-||.- ...-.+-++|-+.+.++++-.+++=+ +..+...++|.++|+.+=
T Consensus 81 ~~vk~~v~~f~~--~~kee~~~~Ek~alkdAve~ia~~~kkIsEk~G~Kyk~lA~eLA~~aK 140 (297)
T d1a87a_ 81 KLVKRFVSQFLL--FRKEEKEKNEKEALLKASELVSGMGDKLGEYLGVKYKNVAKEVANDIK 140 (297)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444444556652 01223334444445555555555444 455667888888887765
No 15
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=24.16 E-value=95 Score=21.80 Aligned_cols=29 Identities=0% Similarity=0.196 Sum_probs=14.3
Q ss_pred HHHHHHhhCCCCcchHHHHHHHHHHHHHH
Q 039737 75 VSAEVAEILPDHTKFKDAALFVERVAKET 103 (144)
Q Consensus 75 vAeevA~~lPengkLk~aA~~VE~vae~v 103 (144)
++..|.+-|=++.+.|+-|..+...++..
T Consensus 413 l~~a~~~vl~~d~~~r~~a~~l~~~~r~a 441 (461)
T d2acva1 413 IEKGLKDLMDKDSIVHKKVQEMKEMSRNA 441 (461)
T ss_dssp HHHHHHHHTCTTCTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 33333444422234776666666555544
No 16
>d1n1qa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus brevis, Dps [TaxId: 1393]}
Probab=23.39 E-value=91 Score=20.16 Aligned_cols=48 Identities=13% Similarity=0.120 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHhHHHHHHhhhhHHHHHHh
Q 039737 91 DAALFVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEPVVDKFVE 140 (144)
Q Consensus 91 ~aA~~VE~vae~v~~dA~~ae~~I~KVeei~~~id~~e~~Vepvid~~~k 140 (144)
.+-..+..+.+.-..=......+|...++..+. -...++.-+++.++|
T Consensus 92 ~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~D~--~t~dll~~i~~~~Ek 139 (149)
T d1n1qa_ 92 SAAEMVSSVVNDFVDLVGELKVARDVADEADDE--ATADMLDAIEAGLEK 139 (149)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH--HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHH
Confidence 444455555444444444444444444444332 223455666665555
No 17
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.06 E-value=74 Score=19.02 Aligned_cols=45 Identities=9% Similarity=0.298 Sum_probs=25.3
Q ss_pred HHHhhCCCC---cc------hHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHH
Q 039737 78 EVAEILPDH---TK------FKDAALFVERVAKETAHDAQLTENFIHKVDEVKQ 122 (144)
Q Consensus 78 evA~~lPen---gk------Lk~aA~~VE~vae~v~~dA~~ae~~I~KVeei~~ 122 (144)
++...+|.. +| |+.|+.+|..+-+.+..-....+.+-.+...+.+
T Consensus 22 ~L~~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~L~~~~~~L~~ 75 (79)
T d1nlwa_ 22 KLKGLVPLGPDSSRHTTLSLLTKAKLHIKKLEDSDRKAVHQIDQLQREQRHLKR 75 (79)
T ss_dssp HHHHSSCCCSSSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446677742 33 6677777777776665544444444444444443
No 18
>d3cx5d2 f.23.11.1 (D:261-307) Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.77 E-value=43 Score=19.73 Aligned_cols=23 Identities=35% Similarity=0.573 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHhhhh--HHHHHHHH
Q 039737 23 KWILGSILSLLLPFW--KQKWEKLK 45 (144)
Q Consensus 23 ~wvlG~il~~~vPf~--~~kw~~l~ 45 (144)
+|++.+.+.+++.+| |.+|..+.
T Consensus 12 K~~~i~s~l~~~~~y~KR~kWs~lK 36 (47)
T d3cx5d2 12 KTVIILSSLYLLSIWVKKFKWAGIK 36 (47)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhccccc
Confidence 455555555566665 35688764
No 19
>d2bykb1 a.22.1.3 (B:11-99) Chrac-14 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=22.50 E-value=84 Score=19.41 Aligned_cols=54 Identities=20% Similarity=0.385 Sum_probs=36.5
Q ss_pred hhCCCCcchHHHH---------HHHHHHHHHHHhhHHH-------HHHHHHhHHHHHHhHHHHHHhhhhHHHHHH
Q 039737 81 EILPDHTKFKDAA---------LFVERVAKETAHDAQL-------TENFIHKVDEVKQDINDLEKLVEPVVDKFV 139 (144)
Q Consensus 81 ~~lPengkLk~aA---------~~VE~vae~v~~dA~~-------ae~~I~KVeei~~~id~~e~~Vepvid~~~ 139 (144)
+.+|+++++.+-| .||.+++...-.-|.. .++++.-++++ ++..+++|+-+.+.
T Consensus 11 ~~~p~~~~iskeA~~~i~~aae~FI~~lt~~A~~~a~~~~rKtI~~~dv~~Al~~~-----~f~~~~~~l~~~l~ 80 (89)
T d2bykb1 11 EALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTEL-----DFESFVPSLTQDLE 80 (89)
T ss_dssp HHSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHT-----TCTTTHHHHHHHHH
T ss_pred HhCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCHHHHHHHHHHC-----CcHHHHHHHHHHHH
Confidence 4689988875533 5677777766655553 57888888776 45577777765553
No 20
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}
Probab=20.98 E-value=36 Score=24.46 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=23.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Q 039737 35 PFWKQKWEKLKQIEGEAEMVIEE----VEKAAEVVEKVA 69 (144)
Q Consensus 35 Pf~~~kw~~l~~ie~evE~vie~----vE~vaEvVE~VA 69 (144)
|-|+..+.++.+|...++..++. +++++.-||.|+
T Consensus 407 ~~y~~~~~r~~~l~~~~~~a~~~~gss~~~~~~~~e~v~ 445 (450)
T d2c1xa1 407 EKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 445 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh
Confidence 56777777888887777665543 555666666654
No 21
>d1ppjd2 f.23.11.1 (D:196-241) Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.93 E-value=49 Score=19.16 Aligned_cols=23 Identities=39% Similarity=0.492 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHhhhh--HHHHHHHH
Q 039737 23 KWILGSILSLLLPFW--KQKWEKLK 45 (144)
Q Consensus 23 ~wvlG~il~~~vPf~--~~kw~~l~ 45 (144)
++++.+++.+++.+| |++|..+.
T Consensus 12 Kv~~~l~~l~~l~yy~KR~~Ws~lK 36 (46)
T d1ppjd2 12 KMLLMMGLLLPLVYAMKRHKWSVLK 36 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 344444444455554 35688764
No 22
>d1ji5a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-1 [TaxId: 1392]}
Probab=20.11 E-value=1.1e+02 Score=19.65 Aligned_cols=44 Identities=9% Similarity=0.064 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhhHHHHHHHHHhHHHHHHhHHHHHHhhhhHHHHHHh
Q 039737 95 FVERVAKETAHDAQLTENFIHKVDEVKQDINDLEKLVEPVVDKFVE 140 (144)
Q Consensus 95 ~VE~vae~v~~dA~~ae~~I~KVeei~~~id~~e~~Vepvid~~~k 140 (144)
.++.+.+.-..-......+|+..++..+. -...++.-+++.++|
T Consensus 89 ml~~~~~~~~~~~~~~~~~~~~a~~~~D~--~t~~ll~~~~~~~ek 132 (142)
T d1ji5a_ 89 MVEAIMKDYEMMLVELKKGMEIAQNSDDE--MTSDLLLGIYTELEK 132 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCH--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHH
Confidence 34444444444444444444444443321 223555666665555
No 23
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.01 E-value=1.2e+02 Score=20.32 Aligned_cols=48 Identities=10% Similarity=0.117 Sum_probs=26.4
Q ss_pred HHHHHHHHhhCCCC-cchHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHH
Q 039737 73 ENVSAEVAEILPDH-TKFKDAALFVERVAKETAHDAQLTENFIHKVDEV 120 (144)
Q Consensus 73 EKvAeevA~~lPen-gkLk~aA~~VE~vae~v~~dA~~ae~~I~KVeei 120 (144)
.|-=+.+.++||+- ++=..-+..|..+.++-..-+..-+..+.+=+++
T Consensus 69 akqId~LI~sLP~~~~see~Q~~~i~~Le~E~~~~~~el~~~v~e~e~l 117 (129)
T d1ykhb1 69 TRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKL 117 (129)
T ss_dssp HHHHHHHHHHSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556678999984 3444445556665555544444444444443333
Done!