Query 039739
Match_columns 628
No_of_seqs 258 out of 3077
Neff 10.8
Searched_HMMs 13730
Date Mon Mar 25 22:14:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039739.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039739hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.9 2.8E-23 2E-27 208.6 33.2 190 284-491 194-383 (384)
2 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 1.4E-25 1E-29 218.1 14.4 256 312-596 51-312 (313)
3 d2omza2 c.10.2.1 (A:33-416) In 99.9 8.2E-23 6E-27 205.1 33.6 343 133-587 41-383 (384)
4 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 2.3E-24 1.7E-28 209.5 14.0 250 287-565 50-303 (313)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.9 3.6E-21 2.6E-25 186.0 27.2 265 313-590 12-285 (305)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.9 9.2E-21 6.7E-25 183.1 27.8 262 312-583 32-304 (305)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 8.9E-21 6.5E-25 180.9 21.7 206 360-590 32-238 (284)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 5.2E-21 3.8E-25 182.6 19.2 258 314-601 14-272 (284)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.8 4E-20 2.9E-24 174.2 21.0 197 361-589 11-207 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.8 3.5E-19 2.6E-23 167.6 21.4 198 337-566 11-208 (266)
11 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.7 2.9E-20 2.1E-24 191.1 -2.6 127 360-486 312-459 (460)
12 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.7 3.4E-20 2.5E-24 190.5 -3.8 114 82-198 3-125 (460)
13 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 2.5E-15 1.8E-19 147.8 31.4 293 262-601 38-347 (353)
14 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 1.3E-16 9.6E-21 146.0 19.4 187 384-586 40-226 (227)
15 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 1.5E-16 1.1E-20 147.5 14.8 199 386-586 30-234 (242)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 1.7E-15 1.2E-19 138.5 21.1 186 335-561 40-225 (227)
17 d2astb2 c.10.1.3 (B:2136-2419) 99.7 7.6E-17 5.6E-21 152.6 11.2 263 315-608 4-277 (284)
18 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 1.4E-15 1E-19 136.8 16.3 165 384-586 45-209 (210)
19 d2omxa2 c.10.2.1 (A:37-235) In 99.6 2.4E-15 1.8E-19 134.0 17.5 141 430-582 59-199 (199)
20 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.6 1E-15 7.3E-20 141.8 14.8 219 314-560 11-232 (242)
21 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 7.6E-14 5.6E-18 137.0 29.1 283 287-614 38-341 (353)
22 d2astb2 c.10.1.3 (B:2136-2419) 99.6 2.9E-16 2.1E-20 148.6 9.1 184 260-443 44-235 (284)
23 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 2.5E-15 1.8E-19 135.2 14.9 164 30-218 45-208 (210)
24 d2omxa2 c.10.2.1 (A:37-235) In 99.6 1E-14 7.5E-19 129.9 18.1 160 385-558 40-199 (199)
25 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.6 3.1E-15 2.2E-19 132.5 9.2 128 363-494 11-139 (192)
26 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.5 8.1E-15 5.9E-19 129.8 10.8 108 434-542 30-139 (192)
27 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.5 1.2E-14 9.1E-19 141.9 5.5 110 22-149 22-134 (344)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 1.4E-13 9.9E-18 117.2 10.1 127 453-583 14-145 (162)
29 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 7.5E-14 5.5E-18 136.3 5.4 245 335-600 30-324 (344)
30 d1a9na_ c.10.2.4 (A:) Spliceso 99.3 1.2E-12 8.9E-17 111.2 8.8 129 356-488 14-146 (162)
31 d1dcea3 c.10.2.2 (A:444-567) R 99.3 8E-12 5.8E-16 100.6 11.7 101 437-566 2-103 (124)
32 d1dcea3 c.10.2.2 (A:444-567) R 99.3 3.8E-12 2.8E-16 102.6 9.0 103 111-223 1-103 (124)
33 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 6E-13 4.3E-17 117.5 -3.4 133 450-590 41-185 (198)
34 d2ifga3 c.10.2.7 (A:36-191) Hi 99.1 3.3E-10 2.4E-14 95.2 11.7 87 503-590 30-116 (156)
35 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 8E-12 5.8E-16 110.1 1.4 130 48-191 41-180 (198)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 99.0 2.8E-10 2.1E-14 95.6 9.4 105 411-516 10-115 (156)
37 d1koha1 c.10.2.3 (A:201-362) m 98.1 8.5E-07 6.2E-11 74.4 4.5 88 25-114 59-152 (162)
38 d1pgva_ c.10.1.1 (A:) Tropomod 98.1 7.9E-07 5.8E-11 75.0 4.0 40 28-67 12-55 (167)
39 d1pgva_ c.10.1.1 (A:) Tropomod 98.1 3.6E-07 2.6E-11 77.2 1.8 67 3-69 13-85 (167)
40 d1io0a_ c.10.1.1 (A:) Tropomod 97.9 3E-06 2.2E-10 71.4 3.1 26 27-52 13-39 (166)
41 d1koha1 c.10.2.3 (A:201-362) m 97.8 2.5E-06 1.8E-10 71.5 2.4 59 525-583 87-152 (162)
42 d1io0a_ c.10.1.1 (A:) Tropomod 97.7 6.9E-06 5E-10 69.1 3.2 51 3-53 15-68 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.93 E-value=2.8e-23 Score=208.60 Aligned_cols=190 Identities=26% Similarity=0.382 Sum_probs=117.0
Q ss_pred hcCccCcEEEeecCCCCCCCCcccccCCccCEEEccCCcCCcccchhhhhhCCCccEEEcccccCCCcccccccCCCCcc
Q 039739 284 ENNTKLRQLSLVNDSLGGPFQLPIHSHKRLGMLDISNNNFRGHIPVEIGDVLPSLFSLNISMNALDGSIPSSFGNMKFLQ 363 (628)
Q Consensus 284 ~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~L~ 363 (628)
..+++++.+.++++.+.+.. ....+++|+++++++|.+. .++ .+. .+++|+.+++.+|.+++.. .+..+++|+
T Consensus 194 ~~l~~~~~l~l~~n~i~~~~--~~~~~~~L~~L~l~~n~l~-~~~-~l~-~l~~L~~L~l~~n~l~~~~--~~~~~~~L~ 266 (384)
T d2omza2 194 AKLTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLK-DIG-TLA-SLTNLTDLDLANNQISNLA--PLSGLTKLT 266 (384)
T ss_dssp GGCTTCSEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCC-CCG-GGG-GCTTCSEEECCSSCCCCCG--GGTTCTTCS
T ss_pred ccccccceeeccCCccCCCC--cccccCCCCEEECCCCCCC-Ccc-hhh-cccccchhccccCccCCCC--cccccccCC
Confidence 45566666666666655432 2345566777777777665 333 222 3667777777777666432 256667777
Q ss_pred EEECcCCcccCccchhhhcCCccccEEEccCCccCCcccccccCCCCCcEEEccCccCcCcccccccCCCcccEEEccCC
Q 039739 364 ILDLSNNHLTGEIPEHLVVGCVNLESLALSNNSLEGHMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNN 443 (628)
Q Consensus 364 ~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~ 443 (628)
.++++++++. .++. +..++.++.+.++.|.+.+ ...+..+++++.|++++|.+.+.. .+..+++|++|++++|
T Consensus 267 ~L~l~~~~l~-~~~~--~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n 339 (384)
T d2omza2 267 ELKLGANQIS-NISP--LAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANN 339 (384)
T ss_dssp EEECCSSCCC-CCGG--GTTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSS
T ss_pred EeeccCcccC-CCCc--ccccccccccccccccccc--ccccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCC
Confidence 7777777665 3333 3346667777777766654 233556677777777777666432 2566677777777777
Q ss_pred cCCCccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCC
Q 039739 444 SLSGKIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDN 491 (628)
Q Consensus 444 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~ 491 (628)
.+++ ++ .+.++++|++|++++|++++..| +.++++|+.|++++|
T Consensus 340 ~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 340 KVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 6653 22 46667777777777777664433 666777777777665
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.92 E-value=1.4e-25 Score=218.10 Aligned_cols=256 Identities=30% Similarity=0.428 Sum_probs=157.0
Q ss_pred ccCEEEccCCcCCc--ccchhhhhhCCCccEEEccc-ccCCCcccccccCCCCccEEECcCCcccCccchhhhcCCcccc
Q 039739 312 RLGMLDISNNNFRG--HIPVEIGDVLPSLFSLNISM-NALDGSIPSSFGNMKFLQILDLSNNHLTGEIPEHLVVGCVNLE 388 (628)
Q Consensus 312 ~L~~L~l~~~~i~~--~~~~~~~~~~~~L~~L~L~~-~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~ 388 (628)
+++.|+++++.+.+ .+|..+.. +++|+.|++++ |.+.+.+|..+.++++|++|++++|++. ..+...+..+++|+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~-L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~-~~~~~~~~~~~~L~ 128 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLAN-LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVS-GAIPDFLSQIKTLV 128 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGG-CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCE-EECCGGGGGCTTCC
T ss_pred EEEEEECCCCCCCCCCCCChHHhc-Cccccccccccccccccccccccccccccchhhhcccccc-ccccccccchhhhc
Confidence 46666666666554 34555554 66666666665 4555566666666666666666666655 33333334455666
Q ss_pred EEEccCCccCCcccccccCCCCCcEEEccCccCcCcccccccCCCcc-cEEEccCCcCCCccCccccCCCCcceEECCCC
Q 039739 389 SLALSNNSLEGHMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVL-EGLFLNNNSLSGKIPRWLGNLTRLQHIMMPKN 467 (628)
Q Consensus 389 ~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L-~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~ 467 (628)
.++++.|.+....+..+..++.++.+++++|.+.+.+|..+..+..+ +.+++++|.+.+..+..+..+..+ .+++.++
T Consensus 129 ~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~ 207 (313)
T d1ogqa_ 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRN 207 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSS
T ss_pred ccccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 66666665555555555555666666666665555555555554443 555555555554444444443332 3555555
Q ss_pred cCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcCcCCCCccccccCCCccEEECCCcccCCccch
Q 039739 468 HLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNGNISD 547 (628)
Q Consensus 468 ~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~ 547 (628)
...+..|..+..+++|+.++++++.+. +.++. +..+++|+.|++++|++++.+|+
T Consensus 208 ~~~~~~~~~~~~~~~l~~l~~~~~~l~-----------------------~~~~~--~~~~~~L~~L~Ls~N~l~g~iP~ 262 (313)
T d1ogqa_ 208 MLEGDASVLFGSDKNTQKIHLAKNSLA-----------------------FDLGK--VGLSKNLNGLDLRNNRIYGTLPQ 262 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEEC-----------------------CBGGG--CCCCTTCCEEECCSSCCEECCCG
T ss_pred ccccccccccccccccccccccccccc-----------------------ccccc--cccccccccccCccCeecccCCh
Confidence 444444444445555555555444443 33332 56678888888888888888888
Q ss_pred hhcCCCCCcEEECCCCcCCccCCccccCCCCCcEEECCCCc-cccc-cccc
Q 039739 548 WVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNS-LHGS-IPLC 596 (628)
Q Consensus 548 ~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~-~~~~-ip~~ 596 (628)
.++++++|++|+|++|++++.+|+ +.++++|+.+++.+|+ +.|. +|.|
T Consensus 263 ~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~l~g~plp~c 312 (313)
T d1ogqa_ 263 GLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred HHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCccccCCCCCCC
Confidence 888888899999999988887875 5778888888888887 4444 5655
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.92 E-value=8.2e-23 Score=205.09 Aligned_cols=343 Identities=24% Similarity=0.268 Sum_probs=175.2
Q ss_pred cCCCCCcEEEccCCcccccCchhhhcCCCCCEEEccccccccccCCCCCCCCCcccEEEcccCeeeeecCCCCcCCCCcc
Q 039739 133 CSLVHLQVLNIAYNDLRGSLPWCLANMTSLRILDVSSNQLTGSISSSPLVHLTSIEELYLSNNHFQIPISLEPFFNHSRL 212 (628)
Q Consensus 133 ~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~l~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L 212 (628)
..+.+|++|+++++.+... ..+..+++|++|++++|+++ .++. ++++++|++|++++|.+... ..+..+++|
T Consensus 41 ~~l~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~-~l~~--l~~L~~L~~L~L~~n~i~~i---~~l~~l~~L 112 (384)
T d2omza2 41 TDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLT-DITP--LKNLTKLVDILMNNNQIADI---TPLANLTNL 112 (384)
T ss_dssp HHHTTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCC---GGGTTCTTC
T ss_pred HHhCCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCC-CCcc--ccCCcccccccccccccccc---ccccccccc
Confidence 4566788888888888742 45778888888888888887 5654 78888888888888877632 236667777
Q ss_pred cEEeccCCcccccccccccCccCcccceeeeccCCCCCCcccccccccCCCccEEEccCCcccCcCchhHHhcCccCcEE
Q 039739 213 KSFYADNNEINAEITQSHSLTAPNFQLSRLSLSSGYGDGFIFPKFLYHQHDLEYVDLSHIKMNGEFPTWLLENNTKLRQL 292 (628)
Q Consensus 213 ~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L 292 (628)
+.+++.++.+.+... ......+.......+.+....... ....
T Consensus 113 ~~L~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~l~~~~~~~---~~~~---- 155 (384)
T d2omza2 113 TGLTLFNNQITDIDP------------------------------LKNLTNLNRLELSSNTISDISALS---GLTS---- 155 (384)
T ss_dssp CEEECCSSCCCCCGG------------------------------GTTCTTCSEEEEEEEEECCCGGGT---TCTT----
T ss_pred ccccccccccccccc------------------------------cccccccccccccccccccccccc---cccc----
Confidence 777766654432111 011112222222222221100000 0000
Q ss_pred EeecCCCCCCCCcccccCCccCEEEccCCcCCcccchhhhhhCCCccEEEcccccCCCcccccccCCCCccEEECcCCcc
Q 039739 293 SLVNDSLGGPFQLPIHSHKRLGMLDISNNNFRGHIPVEIGDVLPSLFSLNISMNALDGSIPSSFGNMKFLQILDLSNNHL 372 (628)
Q Consensus 293 ~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 372 (628)
............. ..+.. .+.........+... .......+++++.++++++.+
T Consensus 156 ------------------~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~--~~~~~~~l~~~~~l~l~~n~i 209 (384)
T d2omza2 156 ------------------LQQLSFGNQVTDL-----KPLAN-LTTLERLDISSNKVS--DISVLAKLTNLESLIATNNQI 209 (384)
T ss_dssp ------------------CSEEEEEESCCCC-----GGGTT-CTTCCEEECCSSCCC--CCGGGGGCTTCSEEECCSSCC
T ss_pred ------------------ccccccccccchh-----hhhcc-ccccccccccccccc--cccccccccccceeeccCCcc
Confidence 0000000000000 00100 112222222222211 122234445555555555554
Q ss_pred cCccchhhhcCCccccEEEccCCccCCcccccccCCCCCcEEEccCccCcCcccccccCCCcccEEEccCCcCCCccCcc
Q 039739 373 TGEIPEHLVVGCVNLESLALSNNSLEGHMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGKIPRW 452 (628)
Q Consensus 373 ~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 452 (628)
. .++. ...+++|++|++++|.++. ...+..+++|+.|++++|.+++.. .+..+++|++|+++++.+.+.. .
T Consensus 210 ~-~~~~--~~~~~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~~--~ 280 (384)
T d2omza2 210 S-DITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNIS--P 280 (384)
T ss_dssp C-CCGG--GGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG--G
T ss_pred C-CCCc--ccccCCCCEEECCCCCCCC--cchhhcccccchhccccCccCCCC--cccccccCCEeeccCcccCCCC--c
Confidence 4 2221 1224455555555555443 123344555555555555544321 2344455555555554443221 2
Q ss_pred ccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcCcCCCCccccccCCCcc
Q 039739 453 LGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNMLHGQLKRGTFFNSYSLV 532 (628)
Q Consensus 453 ~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~ 532 (628)
+..++.++.+.+.+|.+.+. ..+..+++++.|++++| ++.+ +++ +..+++|+
T Consensus 281 ~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n-----------------------~l~~-l~~--l~~l~~L~ 332 (384)
T d2omza2 281 LAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFN-----------------------NISD-ISP--VSSLTKLQ 332 (384)
T ss_dssp GTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSS-----------------------CCSC-CGG--GGGCTTCC
T ss_pred cccccccccccccccccccc--cccchhcccCeEECCCC-----------------------CCCC-Ccc--cccCCCCC
Confidence 34444445555554444321 22444444444444444 4432 221 56678888
Q ss_pred EEECCCcccCCccchhhcCCCCCcEEECCCCcCCccCCccccCCCCCcEEECCCC
Q 039739 533 TLDLSYNRLNGNISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNN 587 (628)
Q Consensus 533 ~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~ 587 (628)
.|++++|++++ ++ .++.+++|++|++++|++++. +. +.++++|+.|+|++|
T Consensus 333 ~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l-~~-l~~l~~L~~L~L~~N 383 (384)
T d2omza2 333 RLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDL-TP-LANLTRITQLGLNDQ 383 (384)
T ss_dssp EEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBC-GG-GTTCTTCSEEECCCE
T ss_pred EEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCC-hh-hccCCCCCEeeCCCC
Confidence 88888888874 33 578888888888888888843 32 788888888888876
No 4
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.91 E-value=2.3e-24 Score=209.50 Aligned_cols=250 Identities=26% Similarity=0.374 Sum_probs=209.3
Q ss_pred ccCcEEEeecCCCCC--CCCcccccCCccCEEEccC-CcCCcccchhhhhhCCCccEEEcccccCCCcccccccCCCCcc
Q 039739 287 TKLRQLSLVNDSLGG--PFQLPIHSHKRLGMLDISN-NNFRGHIPVEIGDVLPSLFSLNISMNALDGSIPSSFGNMKFLQ 363 (628)
Q Consensus 287 ~~L~~L~l~~~~~~~--~~~~~l~~~~~L~~L~l~~-~~i~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~L~ 363 (628)
.+++.|+++++.+.+ ..+..+..++.|++|++++ |.+.+.+|..+.. +++|+.|++++|.+.+..+..+..++.|+
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~-L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~ 128 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAK-LTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGG-CTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCcccccccccccccccccccccccc-ccccchhhhccccccccccccccchhhhc
Confidence 368899999998877 3667899999999999987 7888899999877 89999999999999988888899999999
Q ss_pred EEECcCCcccCccchhhhcCCccccEEEccCCccCCcccccccCCCCC-cEEEccCccCcCcccccccCCCcccEEEccC
Q 039739 364 ILDLSNNHLTGEIPEHLVVGCVNLESLALSNNSLEGHMFSRNFNLTNL-RWLQLEGNHFVGEIPQSLSKCFVLEGLFLNN 442 (628)
Q Consensus 364 ~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L-~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 442 (628)
.+++++|.+...+|..+ ..++.++.+++++|.+.+..+..+..+..+ +.+.+++|.+++..+..+..+..+ .+++..
T Consensus 129 ~l~l~~N~~~~~~p~~l-~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~ 206 (313)
T d1ogqa_ 129 TLDFSYNALSGTLPPSI-SSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSR 206 (313)
T ss_dssp EEECCSSEEESCCCGGG-GGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCS
T ss_pred ccccccccccccCchhh-ccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-cccccc
Confidence 99999999886666554 469999999999999988777777777775 889999999998888777776544 799999
Q ss_pred CcCCCccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcCcCCCCc
Q 039739 443 NSLSGKIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNMLHGQLKR 522 (628)
Q Consensus 443 ~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~ 522 (628)
+...+..+..+..+++++.+++.++.+.+.. ..+..+++|+.|++++|++++ .+|.
T Consensus 207 ~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~-~~~~~~~~L~~L~Ls~N~l~g-----------------------~iP~ 262 (313)
T d1ogqa_ 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYG-----------------------TLPQ 262 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBG-GGCCCCTTCCEEECCSSCCEE-----------------------CCCG
T ss_pred ccccccccccccccccccccccccccccccc-cccccccccccccCccCeecc-----------------------cCCh
Confidence 9988888999999999999999999998554 468888899999998888874 4555
Q ss_pred cccccCCCccEEECCCcccCCccchhhcCCCCCcEEECCCCcC
Q 039739 523 GTFFNSYSLVTLDLSYNRLNGNISDWVDGLSQLSHLILGHNNL 565 (628)
Q Consensus 523 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i 565 (628)
. +.++++|+.|+|++|++++.+|+ ++++++|+.+++++|+.
T Consensus 263 ~-l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~ 303 (313)
T d1ogqa_ 263 G-LTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKC 303 (313)
T ss_dssp G-GGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSE
T ss_pred H-HhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCcc
Confidence 4 66777888888888888777764 46777788888888864
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.88 E-value=3.6e-21 Score=185.97 Aligned_cols=265 Identities=20% Similarity=0.224 Sum_probs=169.1
Q ss_pred cCEEEccCCcCCcccchhhhhhCCCccEEEcccccCCCcccccccCCCCccEEECcCCcccCccchhhhcCCccccEEEc
Q 039739 313 LGMLDISNNNFRGHIPVEIGDVLPSLFSLNISMNALDGSIPSSFGNMKFLQILDLSNNHLTGEIPEHLVVGCVNLESLAL 392 (628)
Q Consensus 313 L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l 392 (628)
.+.++-++..++ .+|..+ .++++.|++++|.++...+..|..+++|++|+++++.+. .++...+.++++|+.|++
T Consensus 12 ~~~~~C~~~~L~-~lP~~l---~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~-~i~~~~f~~l~~L~~L~l 86 (305)
T d1xkua_ 12 LRVVQCSDLGLE-KVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS-KISPGAFAPLVKLERLYL 86 (305)
T ss_dssp TTEEECTTSCCC-SCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCC-CBCTTTTTTCTTCCEEEC
T ss_pred CCEEEecCCCCC-ccCCCC---CCCCCEEECcCCcCCCcChhHhhcccccccccccccccc-ccchhhhhCCCccCEecc
Confidence 444555554554 555544 246666666666666433345666666777777666665 454444555666677777
Q ss_pred cCCccCCcccccccCCCCCcEEEccCccCcCcccccccCCCcccEEEccCCcCC--CccCccccCCCCcceEECCCCcCC
Q 039739 393 SNNSLEGHMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLS--GKIPRWLGNLTRLQHIMMPKNHLE 470 (628)
Q Consensus 393 ~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~--~~~~~~~~~~~~L~~L~l~~~~~~ 470 (628)
++|+++..... ..+.++.|...++.+....+..+.....+..+....+... ...+..+.++++|+.+++++|.+.
T Consensus 87 ~~n~l~~l~~~---~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~ 163 (305)
T d1xkua_ 87 SKNQLKELPEK---MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 163 (305)
T ss_dssp CSSCCSBCCSS---CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred cCCccCcCccc---hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc
Confidence 66666543221 2345666666666666444445555566666666655332 223445666677777777777665
Q ss_pred CCCcccccCCCCCCEEEccCCcCcCCCCCCCC-CCcccEEecCCCcCcCCCCccccccCCCccEEECCCcccCCccchhh
Q 039739 471 GPIPVEFCQLDWLQILDISDNNISGSLPSCFH-PLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNGNISDWV 549 (628)
Q Consensus 471 ~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~-~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 549 (628)
. .+.. .+++|+.|++++|......+..+. ...++.|++++|.+. .++...+.++++|+.|++++|+++ .+|.++
T Consensus 164 ~-l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~-~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l 238 (305)
T d1xkua_ 164 T-IPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS-AVDNGSLANTPHLRELHLNNNKLV-KVPGGL 238 (305)
T ss_dssp S-CCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC-EECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred c-cCcc--cCCccCEEECCCCcCCCCChhHhhcccccccccccccccc-ccccccccccccceeeeccccccc-cccccc
Confidence 3 2322 356777777777766655554443 566777777777775 444455888899999999999988 467788
Q ss_pred cCCCCCcEEECCCCcCCccCCcc------ccCCCCCcEEECCCCccc
Q 039739 550 DGLSQLSHLILGHNNLEGEVPVQ------LCKLNQLQLLDLSNNSLH 590 (628)
Q Consensus 550 ~~l~~L~~L~l~~~~i~~~~~~~------l~~l~~L~~L~l~~~~~~ 590 (628)
..+++|+.|++++|+|+...... +....+|+.|++.+|++.
T Consensus 239 ~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 239 ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred ccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 89999999999999988433333 345678999999999875
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.88 E-value=9.2e-21 Score=183.09 Aligned_cols=262 Identities=20% Similarity=0.193 Sum_probs=153.4
Q ss_pred ccCEEEccCCcCCcccchhhhhhCCCccEEEcccccCCCcccccccCCCCccEEECcCCcccCccchhhhcCCccccEEE
Q 039739 312 RLGMLDISNNNFRGHIPVEIGDVLPSLFSLNISMNALDGSIPSSFGNMKFLQILDLSNNHLTGEIPEHLVVGCVNLESLA 391 (628)
Q Consensus 312 ~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~ 391 (628)
.+++|++++|.++ .++...+..+++|+.|++++|.+....|..|..+++|+.|++++|++. .++... .+.++.|.
T Consensus 32 ~l~~L~Ls~N~i~-~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~-~l~~~~---~~~l~~L~ 106 (305)
T d1xkua_ 32 DTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKM---PKTLQELR 106 (305)
T ss_dssp TCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSC---CTTCCEEE
T ss_pred CCCEEECcCCcCC-CcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccC-cCccch---hhhhhhhh
Confidence 4555555555554 444322222555555555555555444555555566666666666554 444322 34555555
Q ss_pred ccCCccCCcccccccCCCCCcEEEccCccCc--CcccccccCCCcccEEEccCCcCCCccCccccCCCCcceEECCCCcC
Q 039739 392 LSNNSLEGHMFSRNFNLTNLRWLQLEGNHFV--GEIPQSLSKCFVLEGLFLNNNSLSGKIPRWLGNLTRLQHIMMPKNHL 469 (628)
Q Consensus 392 l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~--~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 469 (628)
+..+.+.......+.....++.+....+... ...+..+..+++|+++++++|.+.. .+.. .+++|++|++++|..
T Consensus 107 ~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~-l~~~--~~~~L~~L~l~~n~~ 183 (305)
T d1xkua_ 107 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQG--LPPSLTELHLDGNKI 183 (305)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSS--CCTTCSEEECTTSCC
T ss_pred ccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc-cCcc--cCCccCEEECCCCcC
Confidence 5555555444444444555555555554332 1223445556666666666665542 2222 245666666666666
Q ss_pred CCCCcccccCCCCCCEEEccCCcCcCCCCCCCC-CCcccEEecCCCcCcCCCCccccccCCCccEEECCCcccCCccchh
Q 039739 470 EGPIPVEFCQLDWLQILDISDNNISGSLPSCFH-PLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNGNISDW 548 (628)
Q Consensus 470 ~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~-~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 548 (628)
....+..+..++.++.|++++|.+.+..+..+. .++|+.|++++|++. .++.+ +..+++|+.|++++|+++......
T Consensus 184 ~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~-l~~l~~L~~L~Ls~N~i~~i~~~~ 261 (305)
T d1xkua_ 184 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGG-LADHKYIQVVYLHNNNISAIGSND 261 (305)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTT-TTTCSSCCEEECCSSCCCCCCTTS
T ss_pred CCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccc-cccccCCCEEECCCCccCccChhh
Confidence 655556666666666777666666655454443 566777777777664 55554 788899999999999888554333
Q ss_pred h------cCCCCCcEEECCCCcCC--ccCCccccCCCCCcEEE
Q 039739 549 V------DGLSQLSHLILGHNNLE--GEVPVQLCKLNQLQLLD 583 (628)
Q Consensus 549 ~------~~l~~L~~L~l~~~~i~--~~~~~~l~~l~~L~~L~ 583 (628)
| ...++|+.|++++|++. ...|..|..+.....++
T Consensus 262 f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~~~f~~~~~~~~~~ 304 (305)
T d1xkua_ 262 FCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQ 304 (305)
T ss_dssp SSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEE
T ss_pred ccCcchhcccCCCCEEECCCCcCccCcCCHhHhcccccCcccc
Confidence 3 45688999999999886 24466666666655554
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=8.9e-21 Score=180.91 Aligned_cols=206 Identities=26% Similarity=0.226 Sum_probs=110.7
Q ss_pred CCccEEECcCCcccCccchhhhcCCccccEEEccCCccCCcccccccCCCCCcEEEcc-CccCcCcccccccCCCcccEE
Q 039739 360 KFLQILDLSNNHLTGEIPEHLVVGCVNLESLALSNNSLEGHMFSRNFNLTNLRWLQLE-GNHFVGEIPQSLSKCFVLEGL 438 (628)
Q Consensus 360 ~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~-~~~~~~~~~~~~~~~~~L~~L 438 (628)
+++++|++++|+++ .++...+.++++|++|+++++.+.......+..++.++.+.+. .+.+....+..+..+++|++|
T Consensus 32 ~~~~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L 110 (284)
T d1ozna_ 32 AASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (284)
T ss_dssp TTCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEECcCCcCC-CCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEE
Confidence 34556666665554 5554444455555555555555554444444445555555443 223333334444555555555
Q ss_pred EccCCcCCCccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcCcC
Q 039739 439 FLNNNSLSGKIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNMLHG 518 (628)
Q Consensus 439 ~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~ 518 (628)
++++|.+....+..+...++|+.+++++|.+++..+..|..+++|+.|++++|++.
T Consensus 111 ~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~------------------------ 166 (284)
T d1ozna_ 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS------------------------ 166 (284)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC------------------------
T ss_pred ecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCccc------------------------
Confidence 55555544333444444555555555555554444444444555555555555444
Q ss_pred CCCccccccCCCccEEECCCcccCCccchhhcCCCCCcEEECCCCcCCccCCccccCCCCCcEEECCCCccc
Q 039739 519 QLKRGTFFNSYSLVTLDLSYNRLNGNISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNSLH 590 (628)
Q Consensus 519 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~~~ 590 (628)
.+++.++.++++|+.+++++|++++..|..|..+++|+.|++++|++.+..++.|.++++|++|++++|++.
T Consensus 167 ~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 167 SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 333344556666666666666666555666666666666666666666555556666666666666666655
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=5.2e-21 Score=182.55 Aligned_cols=258 Identities=22% Similarity=0.201 Sum_probs=196.5
Q ss_pred CEEEccCCcCCcccchhhhhhCCCccEEEcccccCCCcccccccCCCCccEEECcCCcccCccchhhhcCCccccEEEcc
Q 039739 314 GMLDISNNNFRGHIPVEIGDVLPSLFSLNISMNALDGSIPSSFGNMKFLQILDLSNNHLTGEIPEHLVVGCVNLESLALS 393 (628)
Q Consensus 314 ~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~ 393 (628)
..+..++..++ .+|..+ .+.++.|+|++|.++...+..|..+++|+.|+++++.+. .++...+.+++.++.+...
T Consensus 14 ~~v~c~~~~L~-~iP~~i---p~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~-~i~~~~~~~~~~~~~l~~~ 88 (284)
T d1ozna_ 14 VTTSCPQQGLQ-AVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA-RIDAAAFTGLALLEQLDLS 88 (284)
T ss_dssp CEEECCSSCCS-SCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECC
T ss_pred eEEEcCCCCCC-ccCCCC---CCCCCEEECcCCcCCCCCHHHhhcccccccccccccccc-ccccccccccccccccccc
Confidence 34666776776 777755 357999999999999666667999999999999999987 7777777778899998775
Q ss_pred C-CccCCcccccccCCCCCcEEEccCccCcCcccccccCCCcccEEEccCCcCCCccCccccCCCCcceEECCCCcCCCC
Q 039739 394 N-NSLEGHMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGKIPRWLGNLTRLQHIMMPKNHLEGP 472 (628)
Q Consensus 394 ~-~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~ 472 (628)
. +.+.......+.++++|++|++++|.+....+..+..+.+|+.+++++|.++...+..|..+++|++|++++|.+...
T Consensus 89 ~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l 168 (284)
T d1ozna_ 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168 (284)
T ss_dssp SCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred cccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCccccc
Confidence 4 456666677788999999999999998866777888899999999999999877778899999999999999999987
Q ss_pred CcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcCcCCCCccccccCCCccEEECCCcccCCccchhhcCC
Q 039739 473 IPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNGNISDWVDGL 552 (628)
Q Consensus 473 ~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l 552 (628)
.+..|..+++|+++++++|++++..+.. |..+++|+.|++++|++.+..+..|+.+
T Consensus 169 ~~~~f~~l~~L~~l~l~~N~l~~i~~~~------------------------f~~l~~L~~L~l~~N~i~~~~~~~~~~~ 224 (284)
T d1ozna_ 169 PERAFRGLHSLDRLLLHQNRVAHVHPHA------------------------FRDLGRLMTLYLFANNLSALPTEALAPL 224 (284)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTT------------------------TTTCTTCCEEECCSSCCSCCCHHHHTTC
T ss_pred chhhhccccccchhhhhhccccccChhH------------------------hhhhhhcccccccccccccccccccccc
Confidence 7888999999999999999887433332 5666777777777777776666677777
Q ss_pred CCCcEEECCCCcCCccCCccccCCCCCcEEECCCCcccccccccccccc
Q 039739 553 SQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNSLHGSIPLCLDNTT 601 (628)
Q Consensus 553 ~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~~~~~ip~~~~~~~ 601 (628)
++|++|++++|++...-+ .-.-...++++....+.+.-+.|..+...+
T Consensus 225 ~~L~~L~l~~N~l~C~C~-~~~l~~~l~~~~~~~~~~~C~~p~~l~g~~ 272 (284)
T d1ozna_ 225 RALQYLRLNDNPWVCDCR-ARPLWAWLQKFRGSSSEVPCSLPQRLAGRD 272 (284)
T ss_dssp TTCCEEECCSSCEECSGG-GHHHHHHHHHCCSEECCCBEEESGGGTTCB
T ss_pred cccCEEEecCCCCCCCcc-chHHHHHHHhCcCCCCceEeCCchHHcCCc
Confidence 777777777777663211 100011234445555555555555554433
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4e-20 Score=174.18 Aligned_cols=197 Identities=24% Similarity=0.231 Sum_probs=102.6
Q ss_pred CccEEECcCCcccCccchhhhcCCccccEEEccCCccCCcccccccCCCCCcEEEccCccCcCcccccccCCCcccEEEc
Q 039739 361 FLQILDLSNNHLTGEIPEHLVVGCVNLESLALSNNSLEGHMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVLEGLFL 440 (628)
Q Consensus 361 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l 440 (628)
.+.+++.+++.++ .+|..+ .+++++|++++|.++......+.++++|++|++++|.++. ++ .+..+++|++|++
T Consensus 11 ~~~~v~C~~~~L~-~iP~~l---p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~L 84 (266)
T d1p9ag_ 11 SHLEVNCDKRNLT-ALPPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDL 84 (266)
T ss_dssp TCCEEECTTSCCS-SCCSCC---CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEEC
T ss_pred CCeEEEccCCCCC-eeCcCc---CcCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccccccccccccc
Confidence 3444455554444 444322 2345555555555544444444455555555555555442 22 2334555555555
Q ss_pred cCCcCCCccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcCcCCC
Q 039739 441 NNNSLSGKIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNMLHGQL 520 (628)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~ 520 (628)
++|.+. ..+..+.++++|+.|+++++.+....+..+..+.+++.|++++|.+.. +
T Consensus 85 s~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~------------------------l 139 (266)
T d1p9ag_ 85 SHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT------------------------L 139 (266)
T ss_dssp CSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC------------------------C
T ss_pred cccccc-ccccccccccccccccccccccceeeccccccccccccccccccccce------------------------e
Confidence 555554 223345555555555555555554444445555555555555555442 3
Q ss_pred CccccccCCCccEEECCCcccCCccchhhcCCCCCcEEECCCCcCCccCCccccCCCCCcEEECCCCcc
Q 039739 521 KRGTFFNSYSLVTLDLSYNRLNGNISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNSL 589 (628)
Q Consensus 521 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~~~~ 589 (628)
+...+..+++|+.|++++|++++..+..|..+++|++|+|++|+++ .+|+.+..+++|+.|+|++|+.
T Consensus 140 ~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 140 PPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred ccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCC
Confidence 3333444555666666666665555555566666666666666665 5555555666666666666554
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=3.5e-19 Score=167.62 Aligned_cols=198 Identities=24% Similarity=0.181 Sum_probs=125.0
Q ss_pred CccEEEcccccCCCcccccccCCCCccEEECcCCcccCccchhhhcCCccccEEEccCCccCCcccccccCCCCCcEEEc
Q 039739 337 SLFSLNISMNALDGSIPSSFGNMKFLQILDLSNNHLTGEIPEHLVVGCVNLESLALSNNSLEGHMFSRNFNLTNLRWLQL 416 (628)
Q Consensus 337 ~L~~L~L~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l 416 (628)
.+.+++.+++.++ .+|..+. +++++|++++|++. .++...+.++++|++|++++|.++.. ..++.+++|++|++
T Consensus 11 ~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~-~l~~~~f~~l~~L~~L~L~~N~l~~l--~~~~~l~~L~~L~L 84 (266)
T d1p9ag_ 11 SHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLY-TFSLATLMPYTRLTQLNLDRAELTKL--QVDGTLPVLGTLDL 84 (266)
T ss_dssp TCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCS-EEEGGGGTTCTTCCEEECTTSCCCEE--ECCSCCTTCCEEEC
T ss_pred CCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCC-CcCHHHhhcccccccccccccccccc--cccccccccccccc
Confidence 3444455555555 3443332 35666666666665 55555555566666666666666532 23345677777777
Q ss_pred cCccCcCcccccccCCCcccEEEccCCcCCCccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCcCC
Q 039739 417 EGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGKIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGS 496 (628)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~ 496 (628)
++|++. ..+..+..+++|++|+++++.+....+..+..+.++++|++++|.+....+..+..+++|+.+++++|+++..
T Consensus 85 s~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~ 163 (266)
T d1p9ag_ 85 SHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163 (266)
T ss_dssp CSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC
T ss_pred cccccc-ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccccccc
Confidence 777766 3455667777788888887777766666777788888888888888766666677788888888888877643
Q ss_pred CCCCCCCCcccEEecCCCcCcCCCCccccccCCCccEEECCCcccCCccchhhcCCCCCcEEECCCCcCC
Q 039739 497 LPSCFHPLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNGNISDWVDGLSQLSHLILGHNNLE 566 (628)
Q Consensus 497 ~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~ 566 (628)
.+.. +..+++|+.|+|++|+++ .+|+.+.++++|+.|+|++|++.
T Consensus 164 ~~~~------------------------~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 164 PAGL------------------------LNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CTTT------------------------TTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred Cccc------------------------cccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 3322 444555666666666655 44555555566666666666554
No 11
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.9e-20 Score=191.07 Aligned_cols=127 Identities=19% Similarity=0.067 Sum_probs=65.5
Q ss_pred CCccEEECcCCcccCccchh---hhcCCccccEEEccCCccCCcccccc----c-CCCCCcEEEccCccCcCc----ccc
Q 039739 360 KFLQILDLSNNHLTGEIPEH---LVVGCVNLESLALSNNSLEGHMFSRN----F-NLTNLRWLQLEGNHFVGE----IPQ 427 (628)
Q Consensus 360 ~~L~~L~l~~~~~~~~~~~~---~~~~~~~L~~L~l~~~~l~~~~~~~~----~-~~~~L~~L~l~~~~~~~~----~~~ 427 (628)
..|+.++++++.+....... +....++|++|++++|.+.+.....+ . ..+.|++|++++|.+++. +..
T Consensus 312 ~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~ 391 (460)
T d1z7xw1 312 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 391 (460)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred cccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHH
Confidence 45666666666554222111 12234566666666666544322221 1 244567777777766532 233
Q ss_pred cccCCCcccEEEccCCcCCCccCcc----cc-CCCCcceEECCCCcCCCCCccc----ccCCCCCCEE
Q 039739 428 SLSKCFVLEGLFLNNNSLSGKIPRW----LG-NLTRLQHIMMPKNHLEGPIPVE----FCQLDWLQIL 486 (628)
Q Consensus 428 ~~~~~~~L~~L~l~~~~~~~~~~~~----~~-~~~~L~~L~l~~~~~~~~~~~~----l~~l~~L~~L 486 (628)
.+..+++|++|++++|.+.+..... +. +...|+.|++.++.+....... ....|+|++|
T Consensus 392 ~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~~~~~l~~~ 459 (460)
T d1z7xw1 392 TLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459 (460)
T ss_dssp HHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHHHHHHHHHCTTSEEE
T ss_pred HHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCHHHHHHHHHHHHhCCCCEEe
Confidence 4555667777777777665432222 22 2346777777777665333322 2244555554
No 12
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.4e-20 Score=190.54 Aligned_cols=114 Identities=22% Similarity=0.217 Sum_probs=56.0
Q ss_pred ccceeecccchhhcCcchhhhhhccCCCccEEeeccccCCCCCCccccccccCCCCCcEEEccCCcccccCc----hhhh
Q 039739 82 SLEHLDMEGALIALNTSFLQIIGESMPSLKYLSLFGSILGTNSSRILDRGLCSLVHLQVLNIAYNDLRGSLP----WCLA 157 (628)
Q Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~----~~l~ 157 (628)
+|++|+++++ .+.+.....+...++++++|+|++|.+++.+.+...+++..+++|++|+|++|.+.+... ..+.
T Consensus 3 ~l~~ld~~~~--~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~ 80 (460)
T d1z7xw1 3 DIQSLDIQCE--ELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 80 (460)
T ss_dssp EEEEEEEESC--CCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CCCEEEeeCC--cCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHh
Confidence 4556666655 333332222222266666666666655432222222345566666666666666543211 1111
Q ss_pred -cCCCCCEEEccccccccc----cCCCCCCCCCcccEEEcccCeee
Q 039739 158 -NMTSLRILDVSSNQLTGS----ISSSPLVHLTSIEELYLSNNHFQ 198 (628)
Q Consensus 158 -~l~~L~~L~l~~~~~~~~----l~~~~l~~l~~L~~L~l~~~~~~ 198 (628)
...+|++|++++|.+++. ++. .+..+++|++|++++|.+.
T Consensus 81 ~~~~~L~~L~L~~n~it~~~~~~l~~-~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 81 TPSCKIQKLSLQNCCLTGAGCGVLSS-TLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHH-HTTSCTTCCEEECCSSBCH
T ss_pred cCCCCCCEEECCCCCccccccccccc-hhhccccccccccccccch
Confidence 123566666666665421 122 3455666666666666543
No 13
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.73 E-value=2.5e-15 Score=147.80 Aligned_cols=293 Identities=27% Similarity=0.340 Sum_probs=172.0
Q ss_pred CCccEEEccCCcccCcCchhHHhcCccCcEEEeecCCCCCCCCcccccCCccCEEEccCCcCCcccchhhhhhCCCccEE
Q 039739 262 HDLEYVDLSHIKMNGEFPTWLLENNTKLRQLSLVNDSLGGPFQLPIHSHKRLGMLDISNNNFRGHIPVEIGDVLPSLFSL 341 (628)
Q Consensus 262 ~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L 341 (628)
.+++.|+++++.++ .+|+. .++|++|+++++.++.. +. ...+|++|+++++.++ .++. ..+.|+.|
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~----~~~L~~L~Ls~N~l~~l-p~---~~~~L~~L~l~~n~l~-~l~~----lp~~L~~L 103 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL----PPHLESLVASCNSLTEL-PE---LPQSLKSLLVDNNNLK-ALSD----LPPLLEYL 103 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC----CTTCSEEECCSSCCSSC-CC---CCTTCCEEECCSSCCS-CCCS----CCTTCCEE
T ss_pred cCCCEEEeCCCCCC-CCCCC----CCCCCEEECCCCCCccc-cc---chhhhhhhhhhhcccc-hhhh----hccccccc
Confidence 35677777777665 45532 35677777777776632 22 2356777777777665 4442 13467778
Q ss_pred EcccccCCCcccccccCCCCccEEECcCCcccCccchhhhcCCccccEEEccCCccCCcccccccCCCCCcEEEccCccC
Q 039739 342 NISMNALDGSIPSSFGNMKFLQILDLSNNHLTGEIPEHLVVGCVNLESLALSNNSLEGHMFSRNFNLTNLRWLQLEGNHF 421 (628)
Q Consensus 342 ~L~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~ 421 (628)
++++|.+. .+|. +..+++|+.|+++++.+. ..+. ....+..+.+..+.... ...+..++.++.+.++++..
T Consensus 104 ~L~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~-~~~~----~~~~l~~l~~~~~~~~~--~~~l~~l~~l~~L~l~~n~~ 174 (353)
T d1jl5a_ 104 GVSNNQLE-KLPE-LQNSSFLKIIDVDNNSLK-KLPD----LPPSLEFIAAGNNQLEE--LPELQNLPFLTAIYADNNSL 174 (353)
T ss_dssp ECCSSCCS-SCCC-CTTCTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCSS--CCCCTTCTTCCEEECCSSCC
T ss_pred cccccccc-cccc-hhhhccceeecccccccc-cccc----ccccccchhhccccccc--cccccccccceecccccccc
Confidence 88777776 3443 466777788887777665 3322 14556666665554332 33445567777777777655
Q ss_pred cCcccccccCCCcccEEEccCCcCCCccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCC
Q 039739 422 VGEIPQSLSKCFVLEGLFLNNNSLSGKIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCF 501 (628)
Q Consensus 422 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~ 501 (628)
... +. .....+.+...++.+. ..+ .+..++.|+.+++++|.... .+ ....++..+.+.++.+........
T Consensus 175 ~~~-~~---~~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~~-~~---~~~~~l~~~~~~~~~~~~~~~~~~ 244 (353)
T d1jl5a_ 175 KKL-PD---LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LP---DLPPSLEALNVRDNYLTDLPELPQ 244 (353)
T ss_dssp SSC-CC---CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CC---SCCTTCCEEECCSSCCSCCCCCCT
T ss_pred ccc-cc---cccccccccccccccc-ccc-cccccccccccccccccccc-cc---cccccccccccccccccccccccc
Confidence 421 11 1122344444444332 222 34556667777776665442 11 223445555665555442211100
Q ss_pred C-----------------CCcccEEecCCCcCcCCCCccccccCCCccEEECCCcccCCccchhhcCCCCCcEEECCCCc
Q 039739 502 H-----------------PLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNGNISDWVDGLSQLSHLILGHNN 564 (628)
Q Consensus 502 ~-----------------~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~ 564 (628)
. .......++..+.+. .+ ...+++|+.|++++|+++ .+|. .+++|+.|++++|+
T Consensus 245 ~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~-~~----~~~~~~L~~L~Ls~N~l~-~lp~---~~~~L~~L~L~~N~ 315 (353)
T d1jl5a_ 245 SLTFLDVSENIFSGLSELPPNLYYLNASSNEIR-SL----CDLPPSLEELNVSNNKLI-ELPA---LPPRLERLIASFNH 315 (353)
T ss_dssp TCCEEECCSSCCSEESCCCTTCCEEECCSSCCS-EE----CCCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSC
T ss_pred cccccccccccccccccccchhcccccccCccc-cc----cccCCCCCEEECCCCccC-cccc---ccCCCCEEECCCCc
Confidence 0 112223333333332 11 233679999999999998 4554 36789999999999
Q ss_pred CCccCCccccCCCCCcEEECCCCcccccccccccccc
Q 039739 565 LEGEVPVQLCKLNQLQLLDLSNNSLHGSIPLCLDNTT 601 (628)
Q Consensus 565 i~~~~~~~l~~l~~L~~L~l~~~~~~~~ip~~~~~~~ 601 (628)
++ .+|+. +++|++|++++|++. .+|+.+.+++
T Consensus 316 L~-~l~~~---~~~L~~L~L~~N~L~-~lp~~~~~L~ 347 (353)
T d1jl5a_ 316 LA-EVPEL---PQNLKQLHVEYNPLR-EFPDIPESVE 347 (353)
T ss_dssp CS-CCCCC---CTTCCEEECCSSCCS-SCCCCCTTCC
T ss_pred CC-ccccc---cCCCCEEECcCCcCC-CCCccccccC
Confidence 98 67764 468999999999987 7887776654
No 14
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=1.3e-16 Score=145.99 Aligned_cols=187 Identities=18% Similarity=0.228 Sum_probs=107.5
Q ss_pred CccccEEEccCCccCCcccccccCCCCCcEEEccCccCcCcccccccCCCcccEEEccCCcCCCccCccccCCCCcceEE
Q 039739 384 CVNLESLALSNNSLEGHMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGKIPRWLGNLTRLQHIM 463 (628)
Q Consensus 384 ~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~ 463 (628)
+.+|++|++.+|.++.. ..+..+++|+.|++++|.+.+.. .+..++.++++++++|.++. + ..+.++++|+.+.
T Consensus 40 l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n~~~~-i-~~l~~l~~L~~l~ 113 (227)
T d1h6ua2 40 LDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGNPLKN-V-SAIAGLQSIKTLD 113 (227)
T ss_dssp HHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSCCCSC-C-GGGTTCTTCCEEE
T ss_pred cCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeeccc--cccccccccccccccccccc-c-ccccccccccccc
Confidence 34455555555544431 23444555555555555544322 14455555555555554431 1 2344555555555
Q ss_pred CCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcCcCCCCccccccCCCccEEECCCcccCC
Q 039739 464 MPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNG 543 (628)
Q Consensus 464 l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 543 (628)
++++..... ..+...+.++.+.++++.+... ......++++.|++++|.+.. .+ .+.++++|+.|++++|++++
T Consensus 114 l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~L~~L~l~~n~~~~-~~--~l~~l~~L~~L~Ls~n~l~~ 187 (227)
T d1h6ua2 114 LTSTQITDV--TPLAGLSNLQVLYLDLNQITNI-SPLAGLTNLQYLSIGNAQVSD-LT--PLANLSKLTTLKADDNKISD 187 (227)
T ss_dssp CTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCCEEECCSSCCCC-CG--GGTTCTTCCEEECCSSCCCC
T ss_pred ccccccccc--chhccccchhhhhchhhhhchh-hhhcccccccccccccccccc-ch--hhcccccceecccCCCccCC
Confidence 555554422 2244555566666655555422 222334556666666665532 21 16778889999999998875
Q ss_pred ccchhhcCCCCCcEEECCCCcCCccCCccccCCCCCcEEECCC
Q 039739 544 NISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSN 586 (628)
Q Consensus 544 ~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~ 586 (628)
.. .++.+++|++|++++|+++ .++ .+.++++|++|++++
T Consensus 188 l~--~l~~l~~L~~L~Ls~N~lt-~i~-~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 188 IS--PLASLPNLIEVHLKNNQIS-DVS-PLANTSNLFIVTLTN 226 (227)
T ss_dssp CG--GGGGCTTCCEEECTTSCCC-BCG-GGTTCTTCCEEEEEE
T ss_pred Ch--hhcCCCCCCEEECcCCcCC-CCc-ccccCCCCCEEEeeC
Confidence 32 3788889999999999888 444 378889999998864
No 15
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=1.5e-16 Score=147.51 Aligned_cols=199 Identities=18% Similarity=0.132 Sum_probs=101.2
Q ss_pred cccEEEccCCccCCcccccccCCCCCcEEEccCccCcCcc-cccccCCCcccEEEccC-CcCCCccCccccCCCCcceEE
Q 039739 386 NLESLALSNNSLEGHMFSRNFNLTNLRWLQLEGNHFVGEI-PQSLSKCFVLEGLFLNN-NSLSGKIPRWLGNLTRLQHIM 463 (628)
Q Consensus 386 ~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~-~~~~~~~~~L~~L~l~~-~~~~~~~~~~~~~~~~L~~L~ 463 (628)
++++|++++|.++......|.++++|++|++++|.+...+ +.+|..++.++++.+.. +.+....+..|.++++|++++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 4444455444444333333444455555555555443322 23344455555554433 233333444455555555555
Q ss_pred CCCCcCCCCCccc-ccCCCCCCEEEccCCcCcCCCCCCCC--CCcccEEecCCCcCcCCCCccccccCCCccEE-ECCCc
Q 039739 464 MPKNHLEGPIPVE-FCQLDWLQILDISDNNISGSLPSCFH--PLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTL-DLSYN 539 (628)
Q Consensus 464 l~~~~~~~~~~~~-l~~l~~L~~L~l~~~~~~~~~~~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L-~l~~~ 539 (628)
++++.+....+.. +..++.+..+...++.+....+..+. ...++.+++.+|+++ .++..++. .++++.+ .+++|
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~-~i~~~~~~-~~~l~~~~~l~~n 187 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNCAFN-GTQLDELNLSDNN 187 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTTTT-TCCEEEEECTTCT
T ss_pred cchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccc-cccccccc-chhhhcccccccc
Confidence 5555554322211 22334444444444444433333332 335556666666664 44444333 3444444 45667
Q ss_pred ccCCccchhhcCCCCCcEEECCCCcCCccCCccccCCCCCcEEECCC
Q 039739 540 RLNGNISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSN 586 (628)
Q Consensus 540 ~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~ 586 (628)
+++...+..|.++++|+.|++++|+++...+..|.++++|+.+++.+
T Consensus 188 ~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 188 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp TCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred ccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCC
Confidence 77755555677788888888888888744344566666666655543
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68 E-value=1.7e-15 Score=138.54 Aligned_cols=186 Identities=22% Similarity=0.278 Sum_probs=117.3
Q ss_pred CCCccEEEcccccCCCcccccccCCCCccEEECcCCcccCccchhhhcCCccccEEEccCCccCCcccccccCCCCCcEE
Q 039739 335 LPSLFSLNISMNALDGSIPSSFGNMKFLQILDLSNNHLTGEIPEHLVVGCVNLESLALSNNSLEGHMFSRNFNLTNLRWL 414 (628)
Q Consensus 335 ~~~L~~L~L~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L 414 (628)
+.+|+.|++.+|.++. + .++..+++|++|++++|.+. .+.. +..+++++.+.+++|.++. ...++.+++|+.+
T Consensus 40 l~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~-~~~~--l~~l~~l~~l~~~~n~~~~--i~~l~~l~~L~~l 112 (227)
T d1h6ua2 40 LDGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQIT-DLAP--LKNLTKITELELSGNPLKN--VSAIAGLQSIKTL 112 (227)
T ss_dssp HHTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCC-CCGG--GTTCCSCCEEECCSCCCSC--CGGGTTCTTCCEE
T ss_pred cCCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceee-cccc--ccccccccccccccccccc--ccccccccccccc
Confidence 4567777777777663 3 34666777777777777665 3332 4456777777777766654 2345567777777
Q ss_pred EccCccCcCcccccccCCCcccEEEccCCcCCCccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCc
Q 039739 415 QLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGKIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNIS 494 (628)
Q Consensus 415 ~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 494 (628)
.++++...+. ..+...+.++.+.++++.+... ..+.++++|++|++++|.+.... .+.++++|+.|++++|+++
T Consensus 113 ~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~ 186 (227)
T d1h6ua2 113 DLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKIS 186 (227)
T ss_dssp ECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred cccccccccc--chhccccchhhhhchhhhhchh--hhhccccccccccccccccccch--hhcccccceecccCCCccC
Confidence 7776665432 2345566667777766665422 23555666777777776665322 2566666666666666554
Q ss_pred CCCCCCCCCCcccEEecCCCcCcCCCCccccccCCCccEEECCCcccCCccchhhcCCCCCcEEECC
Q 039739 495 GSLPSCFHPLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNGNISDWVDGLSQLSHLILG 561 (628)
Q Consensus 495 ~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~ 561 (628)
+ ++. +..+++|++|++++|++++..+ ++++++|+.|+++
T Consensus 187 ~------------------------l~~--l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 187 D------------------------ISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp C------------------------CGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred C------------------------Chh--hcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence 2 222 5667888888888888875433 7788888888875
No 17
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=7.6e-17 Score=152.62 Aligned_cols=263 Identities=17% Similarity=0.158 Sum_probs=167.7
Q ss_pred EEEccCCcCCcccchhhhhhCCCccEEEcccccCCCcccccccCCCCccEEECcCCcccCccchhhhcCCccccEEEccC
Q 039739 315 MLDISNNNFRGHIPVEIGDVLPSLFSLNISMNALDGSIPSSFGNMKFLQILDLSNNHLTGEIPEHLVVGCVNLESLALSN 394 (628)
Q Consensus 315 ~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~ 394 (628)
+++++++.+.......... .....+.+......... .......+|++|+++++.+++.....++.++++|++|++++
T Consensus 4 ~lDLs~~~l~~~~l~~l~~--~~~~~lrl~~~~~~~~~-~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~ 80 (284)
T d2astb2 4 TLDLTGKNLHPDVTGRLLS--QGVIAFRCPRSFMDQPL-AEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 80 (284)
T ss_dssp EEECTTCBCCHHHHHHHHH--TTCSEEECTTCEECSCC-CSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred EEECCCCCCCchHHHHHHh--ccceEeeccccccccch-hhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence 5777776554332223322 23555666555444222 22334568999999988877555556677889999999999
Q ss_pred CccCCcccccccCCCCCcEEEccCcc-CcCc-ccccccCCCcccEEEccCCcC-CCc-cCccc-cCCCCcceEECCCCc-
Q 039739 395 NSLEGHMFSRNFNLTNLRWLQLEGNH-FVGE-IPQSLSKCFVLEGLFLNNNSL-SGK-IPRWL-GNLTRLQHIMMPKNH- 468 (628)
Q Consensus 395 ~~l~~~~~~~~~~~~~L~~L~l~~~~-~~~~-~~~~~~~~~~L~~L~l~~~~~-~~~-~~~~~-~~~~~L~~L~l~~~~- 468 (628)
|.+++.....++.+++|+.|++++|. +++. +......+++|++|++++|.. ++. ....+ ..++.|++|+++++.
T Consensus 81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 160 (284)
T d2astb2 81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK 160 (284)
T ss_dssp CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG
T ss_pred cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccc
Confidence 98877777777788899999998874 3322 223345688888998888743 321 11222 335778888888763
Q ss_pred -CCCCCc-ccccCCCCCCEEEccCCc-CcCCCCCCCCCCcccEEecCCCcCcCCCCccccccCCCccEEECCCc-ccCCc
Q 039739 469 -LEGPIP-VEFCQLDWLQILDISDNN-ISGSLPSCFHPLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLDLSYN-RLNGN 544 (628)
Q Consensus 469 -~~~~~~-~~l~~l~~L~~L~l~~~~-~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~-~~~~~ 544 (628)
+++... .....+++|++|++++|. +++ ..... +..+++|++|++++| .+++.
T Consensus 161 ~i~~~~l~~l~~~~~~L~~L~L~~~~~itd-----------------------~~~~~-l~~~~~L~~L~L~~C~~i~~~ 216 (284)
T d2astb2 161 NLQKSDLSTLVRRCPNLVHLDLSDSVMLKN-----------------------DCFQE-FFQLNYLQHLSLSRCYDIIPE 216 (284)
T ss_dssp GSCHHHHHHHHHHCTTCSEEECTTCTTCCG-----------------------GGGGG-GGGCTTCCEEECTTCTTCCGG
T ss_pred ccccccccccccccccccccccccccCCCc-----------------------hhhhh-hcccCcCCEEECCCCCCCChH
Confidence 222111 123467788888887764 331 12222 566788999999986 47666
Q ss_pred cchhhcCCCCCcEEECCCCcCCccC-CccccCCCCCcEEECCCCccccccccccccccccccccC
Q 039739 545 ISDWVDGLSQLSHLILGHNNLEGEV-PVQLCKLNQLQLLDLSNNSLHGSIPLCLDNTTLHESYNN 608 (628)
Q Consensus 545 ~~~~~~~l~~L~~L~l~~~~i~~~~-~~~l~~l~~L~~L~l~~~~~~~~ip~~~~~~~~~~~~~~ 608 (628)
....++++++|+.|++++| ++... +.....+|+|+ +..++++...|+.+.+-.....|+.
T Consensus 217 ~l~~L~~~~~L~~L~l~~~-~~d~~l~~l~~~lp~L~---i~~~~ls~~~~~~~~~~~~~~iw~~ 277 (284)
T d2astb2 217 TLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQ---INCSHFTTIARPTIGNKKNQEIWGI 277 (284)
T ss_dssp GGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSE---ESCCCSCCTTCSSCSSTTCCCBTTB
T ss_pred HHHHHhcCCCCCEEeeeCC-CCHHHHHHHHHhCcccc---ccCccCCCCCCCccCccccchhccc
Confidence 6667888899999999988 44222 32234466654 5777788777777777666666654
No 18
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65 E-value=1.4e-15 Score=136.82 Aligned_cols=165 Identities=23% Similarity=0.346 Sum_probs=102.7
Q ss_pred CccccEEEccCCccCCcccccccCCCCCcEEEccCccCcCcccccccCCCcccEEEccCCcCCCccCccccCCCCcceEE
Q 039739 384 CVNLESLALSNNSLEGHMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGKIPRWLGNLTRLQHIM 463 (628)
Q Consensus 384 ~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~ 463 (628)
+.+|++|++++|.+... ..+..+++|++|++++|++++.. .+..+++|++|++++|.+++ ++ .+.++++|+.|+
T Consensus 45 L~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (210)
T ss_dssp HHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred hcCccEEECcCCCCCCc--hhHhhCCCCCEEeCCCccccCcc--ccccCccccccccccccccc-cc-cccccccccccc
Confidence 45666666666665542 23455666666666666665322 24555666666666665542 22 355555555555
Q ss_pred CCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcCcCCCCccccccCCCccEEECCCcccCC
Q 039739 464 MPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNG 543 (628)
Q Consensus 464 l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 543 (628)
+++|.+... ..+..+++++.+++++|.++ + .+ .+..+++|+.+++++|++++
T Consensus 119 l~~~~~~~~--~~l~~l~~l~~l~~~~n~l~-----------------------~-~~--~~~~l~~L~~l~l~~n~l~~ 170 (210)
T d1h6ta2 119 LEHNGISDI--NGLVHLPQLESLYLGNNKIT-----------------------D-IT--VLSRLTKLDTLSLEDNQISD 170 (210)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCC-----------------------C-CG--GGGGCTTCSEEECCSSCCCC
T ss_pred ccccccccc--cccccccccccccccccccc-----------------------c-cc--cccccccccccccccccccc
Confidence 555554421 23445555555555555443 2 11 15567889999999998875
Q ss_pred ccchhhcCCCCCcEEECCCCcCCccCCccccCCCCCcEEECCC
Q 039739 544 NISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSN 586 (628)
Q Consensus 544 ~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~ 586 (628)
.. .+..+++|++|++++|+++ .++ .+.++++|++|+|++
T Consensus 171 i~--~l~~l~~L~~L~Ls~N~i~-~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 171 IV--PLAGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp CG--GGTTCTTCCEEECCSSCCC-BCG-GGTTCTTCSEEEEEE
T ss_pred cc--cccCCCCCCEEECCCCCCC-CCh-hhcCCCCCCEEEccC
Confidence 43 3788899999999999988 454 588999999999874
No 19
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.64 E-value=2.4e-15 Score=134.01 Aligned_cols=141 Identities=24% Similarity=0.306 Sum_probs=67.0
Q ss_pred cCCCcccEEEccCCcCCCccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEE
Q 039739 430 SKCFVLEGLFLNNNSLSGKIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQV 509 (628)
Q Consensus 430 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L 509 (628)
..+++|++|++++|.+++.. .+.++++|++|++++|.+.... .+..+++|+.|++++|.... .+....++.|+.+
T Consensus 59 ~~l~nL~~L~Ls~N~l~~~~--~l~~l~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~l~~~~~~~-~~~~~~l~~L~~L 133 (199)
T d2omxa2 59 EYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADIT--PLANLTNLTGLTLFNNQITD-IDPLKNLTNLNRL 133 (199)
T ss_dssp GGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCC-CGGGTTCTTCSEE
T ss_pred ccCCCcCcCccccccccCcc--cccCCccccccccccccccccc--cccccccccccccccccccc-ccccchhhhhHHh
Confidence 33444444444444443221 1444444444444444443211 24444444444444444332 1111123333333
Q ss_pred ecCCCcCcCCCCccccccCCCccEEECCCcccCCccchhhcCCCCCcEEECCCCcCCccCCccccCCCCCcEE
Q 039739 510 HLSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNGNISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLL 582 (628)
Q Consensus 510 ~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L 582 (628)
++++|++. .++ .+..+++|+.|++++|++++.. .++++++|+.|++++|+++ .++ .++.+++|++|
T Consensus 134 ~l~~n~l~-~~~--~l~~~~~L~~L~l~~n~l~~l~--~l~~l~~L~~L~ls~N~i~-~i~-~l~~L~~L~~L 199 (199)
T d2omxa2 134 ELSSNTIS-DIS--ALSGLTSLQQLNFSSNQVTDLK--PLANLTTLERLDISSNKVS-DIS-VLAKLTNLESL 199 (199)
T ss_dssp ECCSSCCC-CCG--GGTTCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCC-CCG-GGGGCTTCSEE
T ss_pred hhhhhhhc-ccc--cccccccccccccccccccCCc--cccCCCCCCEEECCCCCCC-CCc-cccCCCCCCcC
Confidence 33333332 222 1555667777777777666432 3666777777777777766 332 46666666654
No 20
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1e-15 Score=141.79 Aligned_cols=219 Identities=17% Similarity=0.185 Sum_probs=117.0
Q ss_pred CEEEccCCcCCcccchhhhhhCCCccEEEcccccCCCcccccccCCCCccEEECcCCcccCccchhhhcCCccccEEEcc
Q 039739 314 GMLDISNNNFRGHIPVEIGDVLPSLFSLNISMNALDGSIPSSFGNMKFLQILDLSNNHLTGEIPEHLVVGCVNLESLALS 393 (628)
Q Consensus 314 ~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~ 393 (628)
+.++.++..++ .+|..+ +++++.|++++|.++...+..|.++++|++|++++|.+...++...+.+++.++++.+.
T Consensus 11 ~~i~c~~~~l~-~iP~~l---~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~ 86 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 86 (242)
T ss_dssp SEEEEESCSCS-SCCSCS---CSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE
T ss_pred CEEEEeCCCCC-CcCCCC---CCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccc
Confidence 34555555554 455433 23555666666555533333455555566665555555433444444445555555443
Q ss_pred C-CccCCcccccccCCCCCcEEEccCccCcCcccccccCCCcccEEEccCCcCCCccCccccCCCCcceEECCCCcCCCC
Q 039739 394 N-NSLEGHMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGKIPRWLGNLTRLQHIMMPKNHLEGP 472 (628)
Q Consensus 394 ~-~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~ 472 (628)
. +.+.......+.++++|++++++++.+....+ + ..+..++.++.+...++.+...
T Consensus 87 ~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~--~---------------------~~~~~l~~l~~~~~~n~~l~~i 143 (242)
T d1xwdc1 87 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD--V---------------------HKIHSLQKVLLDIQDNINIHTI 143 (242)
T ss_dssp CCTTCCEECTTSEECCTTCCEEEEESCCCCSCCC--C---------------------TTTCBSSCEEEEEESCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhccccc--c---------------------cccccccccccccccccccccc
Confidence 3 23333333334444555555554444432111 1 1122233444444444444433
Q ss_pred CcccccCCC-CCCEEEccCCcCcCCCCCCCCCCcccEEe-cCCCcCcCCCCccccccCCCccEEECCCcccCCccchhhc
Q 039739 473 IPVEFCQLD-WLQILDISDNNISGSLPSCFHPLSVEQVH-LSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNGNISDWVD 550 (628)
Q Consensus 473 ~~~~l~~l~-~L~~L~l~~~~~~~~~~~~~~~~~L~~L~-l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 550 (628)
.+..+..++ .++.|++++|+++......+....++.+. +.+|.+. .++..+|.++++|+.|++++|+++...+..|.
T Consensus 144 ~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~l~-~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~ 222 (242)
T d1xwdc1 144 ERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLE 222 (242)
T ss_dssp CTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTTCC-CCCTTTTTTSCCCSEEECTTSCCCCCCSSSCT
T ss_pred cccccccccccceeeecccccccccccccccchhhhccccccccccc-cccHHHhcCCCCCCEEECCCCcCCccCHHHHc
Confidence 334444443 66677777777765555555555655553 4556663 67777788899999999999999866555666
Q ss_pred CCCCCcEEEC
Q 039739 551 GLSQLSHLIL 560 (628)
Q Consensus 551 ~l~~L~~L~l 560 (628)
++++|+.+++
T Consensus 223 ~l~~L~~l~~ 232 (242)
T d1xwdc1 223 NLKKLRARST 232 (242)
T ss_dssp TCCEEESSSE
T ss_pred CCcccccCcC
Confidence 6666655444
No 21
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.63 E-value=7.6e-14 Score=136.99 Aligned_cols=283 Identities=27% Similarity=0.308 Sum_probs=197.1
Q ss_pred ccCcEEEeecCCCCCCCCcccccCCccCEEEccCCcCCcccchhhhhhCCCccEEEcccccCCCcccccccCCCCccEEE
Q 039739 287 TKLRQLSLVNDSLGGPFQLPIHSHKRLGMLDISNNNFRGHIPVEIGDVLPSLFSLNISMNALDGSIPSSFGNMKFLQILD 366 (628)
Q Consensus 287 ~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~L~~L~ 366 (628)
.++++|+++++.++. .+. ..++|++|++++|.++ .+|.. +.+|+.|++.+|.++. ++.. .+.|++|+
T Consensus 38 ~~l~~LdLs~~~L~~-lp~---~~~~L~~L~Ls~N~l~-~lp~~----~~~L~~L~l~~n~l~~-l~~l---p~~L~~L~ 104 (353)
T d1jl5a_ 38 RQAHELELNNLGLSS-LPE---LPPHLESLVASCNSLT-ELPEL----PQSLKSLLVDNNNLKA-LSDL---PPLLEYLG 104 (353)
T ss_dssp HTCSEEECTTSCCSC-CCS---CCTTCSEEECCSSCCS-SCCCC----CTTCCEEECCSSCCSC-CCSC---CTTCCEEE
T ss_pred cCCCEEEeCCCCCCC-CCC---CCCCCCEEECCCCCCc-ccccc----hhhhhhhhhhhcccch-hhhh---cccccccc
Confidence 578999999998875 332 3578999999999998 77753 4689999999998873 3321 24699999
Q ss_pred CcCCcccCccchhhhcCCccccEEEccCCccCCcccccccCCCCCcEEEccCccCcCcccccccCCCcccEEEccCCcCC
Q 039739 367 LSNNHLTGEIPEHLVVGCVNLESLALSNNSLEGHMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLS 446 (628)
Q Consensus 367 l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 446 (628)
+++|.+. .++. +..+++|+.|+++++.+.... ...+.+..+.+..+... ....+..++.++.+.+..+...
T Consensus 105 L~~n~l~-~lp~--~~~l~~L~~L~l~~~~~~~~~----~~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 105 VSNNQLE-KLPE--LQNSSFLKIIDVDNNSLKKLP----DLPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp CCSSCCS-SCCC--CTTCTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCS
T ss_pred ccccccc-cccc--hhhhccceeeccccccccccc----cccccccchhhcccccc--ccccccccccceeccccccccc
Confidence 9999987 6765 345899999999988775422 23466778887766554 2345677889999999988765
Q ss_pred CccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcCcCCCCccccc
Q 039739 447 GKIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNMLHGQLKRGTFF 526 (628)
Q Consensus 447 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~ 526 (628)
.. + ......+.+....+.+. .. ..+..++.|+.+++++|.... .+. ...++..+.+..+.+... +..
T Consensus 176 ~~-~---~~~~~~~~l~~~~~~~~-~~-~~~~~l~~L~~l~l~~n~~~~-~~~--~~~~l~~~~~~~~~~~~~-~~~--- 242 (353)
T d1jl5a_ 176 KL-P---DLPLSLESIVAGNNILE-EL-PELQNLPFLTTIYADNNLLKT-LPD--LPPSLEALNVRDNYLTDL-PEL--- 242 (353)
T ss_dssp SC-C---CCCTTCCEEECCSSCCS-SC-CCCTTCTTCCEEECCSSCCSS-CCS--CCTTCCEEECCSSCCSCC-CCC---
T ss_pred cc-c---ccccccccccccccccc-cc-ccccccccccccccccccccc-ccc--cccccccccccccccccc-ccc---
Confidence 32 2 12234456666666554 22 246788999999999987663 332 245566777777666421 111
Q ss_pred cCCCcc--------------------EEECCCcccCCccchhhcCCCCCcEEECCCCcCCccCCccccCCCCCcEEECCC
Q 039739 527 NSYSLV--------------------TLDLSYNRLNGNISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSN 586 (628)
Q Consensus 527 ~~~~L~--------------------~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~ 586 (628)
..++. ..++..+.+. .....+++|++|++++|+++ .+|.. +++|++|++++
T Consensus 243 -~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~----~~~~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~ 313 (353)
T d1jl5a_ 243 -PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIR----SLCDLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASF 313 (353)
T ss_dssp -CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCS----EECCCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCS
T ss_pred -cccccccccccccccccccccchhcccccccCccc----cccccCCCCCEEECCCCccC-ccccc---cCCCCEEECCC
Confidence 12233 3333333332 12234689999999999999 67754 57899999999
Q ss_pred Ccccccccccccccc-ccccccCCccccc
Q 039739 587 NSLHGSIPLCLDNTT-LHESYNNSSSLDK 614 (628)
Q Consensus 587 ~~~~~~ip~~~~~~~-~~~~~~~~~~~~~ 614 (628)
|+++ .||+.+.+++ ++..+|+..+++.
T Consensus 314 N~L~-~l~~~~~~L~~L~L~~N~L~~lp~ 341 (353)
T d1jl5a_ 314 NHLA-EVPELPQNLKQLHVEYNPLREFPD 341 (353)
T ss_dssp SCCS-CCCCCCTTCCEEECCSSCCSSCCC
T ss_pred CcCC-ccccccCCCCEEECcCCcCCCCCc
Confidence 9998 8999999988 6666777777763
No 22
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=2.9e-16 Score=148.56 Aligned_cols=184 Identities=23% Similarity=0.229 Sum_probs=107.7
Q ss_pred cCCCccEEEccCCcccCcCchhHHhcCccCcEEEeecCCCCCCCCcccccCCccCEEEccCC-cCCcccchhhhhhCCCc
Q 039739 260 HQHDLEYVDLSHIKMNGEFPTWLLENNTKLRQLSLVNDSLGGPFQLPIHSHKRLGMLDISNN-NFRGHIPVEIGDVLPSL 338 (628)
Q Consensus 260 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~-~i~~~~~~~~~~~~~~L 338 (628)
...+|++|+++++.+.+.....++..+++|++|.+++|.+.+.....+..+++|++|++++| .+++.....+...+++|
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L 123 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 123 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhc
Confidence 44578899998888776666666788888888888888776655566677788888888876 34422222334456777
Q ss_pred cEEEccccc-CCCc-ccccc-cCCCCccEEECcCCc--ccCccchhhhcCCccccEEEccCCc-cCCcccccccCCCCCc
Q 039739 339 FSLNISMNA-LDGS-IPSSF-GNMKFLQILDLSNNH--LTGEIPEHLVVGCVNLESLALSNNS-LEGHMFSRNFNLTNLR 412 (628)
Q Consensus 339 ~~L~L~~~~-~~~~-~~~~~-~~~~~L~~L~l~~~~--~~~~~~~~~~~~~~~L~~L~l~~~~-l~~~~~~~~~~~~~L~ 412 (628)
++|++++|. ++.. +...+ ..+++|+.|+++++. +++.....++.++++|++|++++|. +++.....+..+++|+
T Consensus 124 ~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~ 203 (284)
T d2astb2 124 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 203 (284)
T ss_dssp CEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred cccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCC
Confidence 777777764 3321 11112 224567777776642 2222222333446666666666543 4444445555566666
Q ss_pred EEEccCc-cCcCcccccccCCCcccEEEccCC
Q 039739 413 WLQLEGN-HFVGEIPQSLSKCFVLEGLFLNNN 443 (628)
Q Consensus 413 ~L~l~~~-~~~~~~~~~~~~~~~L~~L~l~~~ 443 (628)
+|++++| .+++.....+.++++|++|++++|
T Consensus 204 ~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 204 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 6666664 233333334445555555555554
No 23
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.62 E-value=2.5e-15 Score=135.15 Aligned_cols=164 Identities=23% Similarity=0.366 Sum_probs=89.0
Q ss_pred CCCCcEEecCCCCCCCcchhHhhccCCCCceEecccccccccccCCCccccCccceeecccchhhcCcchhhhhhccCCC
Q 039739 30 FTNLEYLTLDSSSLHISLLQSIASIFPSLKNLSMIGCEVNGLVRGQGFPHFKSLEHLDMEGALIALNTSFLQIIGESMPS 109 (628)
Q Consensus 30 ~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~ 109 (628)
+..|++|++++|.+.+. ..+.. +++|++|++++|.+.+. + .+.++++|++|++++| .+.+ ++ .+.. +++
T Consensus 45 L~~L~~L~l~~~~i~~l--~~l~~-l~~L~~L~L~~n~i~~l-~--~~~~l~~L~~L~l~~n--~i~~-l~-~l~~-l~~ 113 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSV--QGIQY-LPNVTKLFLNGNKLTDI-K--PLANLKNLGWLFLDEN--KVKD-LS-SLKD-LKK 113 (210)
T ss_dssp HHTCCEEECTTSCCCCC--TTGGG-CTTCCEEECCSSCCCCC-G--GGTTCTTCCEEECCSS--CCCC-GG-GGTT-CTT
T ss_pred hcCccEEECcCCCCCCc--hhHhh-CCCCCEEeCCCccccCc-c--ccccCccccccccccc--cccc-cc-cccc-ccc
Confidence 44566666666655432 22444 66666666666655532 1 2455666666666665 2222 22 3444 666
Q ss_pred ccEEeeccccCCCCCCccccccccCCCCCcEEEccCCcccccCchhhhcCCCCCEEEccccccccccCCCCCCCCCcccE
Q 039739 110 LKYLSLFGSILGTNSSRILDRGLCSLVHLQVLNIAYNDLRGSLPWCLANMTSLRILDVSSNQLTGSISSSPLVHLTSIEE 189 (628)
Q Consensus 110 L~~L~l~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~l~~~~l~~l~~L~~ 189 (628)
|++|+++++.... ++ .+..+++++.+++++|.+.+ +..+..+++|+++++++|++. .++. +.++++|++
T Consensus 114 L~~L~l~~~~~~~----~~--~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~-~i~~--l~~l~~L~~ 182 (210)
T d1h6ta2 114 LKSLSLEHNGISD----IN--GLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQIS-DIVP--LAGLTKLQN 182 (210)
T ss_dssp CCEEECTTSCCCC----CG--GGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCC-CCGG--GTTCTTCCE
T ss_pred ccccccccccccc----cc--cccccccccccccccccccc--ccccccccccccccccccccc-cccc--ccCCCCCCE
Confidence 6666666655533 22 45566666666666665542 234555666666666666665 3433 556666666
Q ss_pred EEcccCeeeeecCCCCcCCCCcccEEecc
Q 039739 190 LYLSNNHFQIPISLEPFFNHSRLKSFYAD 218 (628)
Q Consensus 190 L~l~~~~~~~~~~~~~l~~l~~L~~L~l~ 218 (628)
|++++|.++. + ..+.++++|++|+++
T Consensus 183 L~Ls~N~i~~-l--~~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 183 LYLSKNHISD-L--RALAGLKNLDVLELF 208 (210)
T ss_dssp EECCSSCCCB-C--GGGTTCTTCSEEEEE
T ss_pred EECCCCCCCC-C--hhhcCCCCCCEEEcc
Confidence 6666665542 1 235566666666654
No 24
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.61 E-value=1e-14 Score=129.90 Aligned_cols=160 Identities=25% Similarity=0.309 Sum_probs=83.4
Q ss_pred ccccEEEccCCccCCcccccccCCCCCcEEEccCccCcCcccccccCCCcccEEEccCCcCCCccCccccCCCCcceEEC
Q 039739 385 VNLESLALSNNSLEGHMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGKIPRWLGNLTRLQHIMM 464 (628)
Q Consensus 385 ~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l 464 (628)
+++++|+++++.+.. ...+..+++|++|++++|.+++.. .+.++++|++|++++|.+... + .+.+++.|+.|++
T Consensus 40 ~~l~~L~l~~~~i~~--l~~l~~l~nL~~L~Ls~N~l~~~~--~l~~l~~L~~L~l~~n~~~~~-~-~l~~l~~L~~L~l 113 (199)
T d2omxa2 40 DQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADI-T-PLANLTNLTGLTL 113 (199)
T ss_dssp TTCCEEECTTSCCCC--CTTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCC-G-GGTTCTTCSEEEC
T ss_pred cCCCEEECCCCCCCC--ccccccCCCcCcCccccccccCcc--cccCCcccccccccccccccc-c-ccccccccccccc
Confidence 344444444444432 122334444555555554444221 144445555555555444321 1 2445555555555
Q ss_pred CCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcCcCCCCccccccCCCccEEECCCcccCCc
Q 039739 465 PKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNGN 544 (628)
Q Consensus 465 ~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~ 544 (628)
+++..... ..+..+++|+.|++++|++. ..+.....++++.|++.+|++++ ++. ++++++|+.|++++|++++
T Consensus 114 ~~~~~~~~--~~~~~l~~L~~L~l~~n~l~-~~~~l~~~~~L~~L~l~~n~l~~-l~~--l~~l~~L~~L~ls~N~i~~- 186 (199)
T d2omxa2 114 FNNQITDI--DPLKNLTNLNRLELSSNTIS-DISALSGLTSLQQLNFSSNQVTD-LKP--LANLTTLERLDISSNKVSD- 186 (199)
T ss_dssp CSSCCCCC--GGGTTCTTCSEEECCSSCCC-CCGGGTTCTTCSEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-
T ss_pred cccccccc--cccchhhhhHHhhhhhhhhc-ccccccccccccccccccccccC-Ccc--ccCCCCCCEEECCCCCCCC-
Confidence 55544422 22445555555555555544 22333335555555555555542 322 7788999999999999875
Q ss_pred cchhhcCCCCCcEE
Q 039739 545 ISDWVDGLSQLSHL 558 (628)
Q Consensus 545 ~~~~~~~l~~L~~L 558 (628)
++ .++.+++|++|
T Consensus 187 i~-~l~~L~~L~~L 199 (199)
T d2omxa2 187 IS-VLAKLTNLESL 199 (199)
T ss_dssp CG-GGGGCTTCSEE
T ss_pred Cc-cccCCCCCCcC
Confidence 33 47888888876
No 25
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.56 E-value=3.1e-15 Score=132.54 Aligned_cols=128 Identities=22% Similarity=0.300 Sum_probs=86.1
Q ss_pred cEEECcCCcccCccchhhhcCCccccEEEccCCccCC-cccccccCCCCCcEEEccCccCcCcccccccCCCcccEEEcc
Q 039739 363 QILDLSNNHLTGEIPEHLVVGCVNLESLALSNNSLEG-HMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVLEGLFLN 441 (628)
Q Consensus 363 ~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 441 (628)
+.++.++++++ .+|..+ .+.+++|++++|.++. .....+.++++|+.|++++|.+....+..+..+++|++|+++
T Consensus 11 ~~v~Cs~~~L~-~iP~~l---p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDI---PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCC---CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEEeCCCcC-ccCCCC---CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeec
Confidence 35566666655 555543 3566667777776654 334455567777777777777766666666777777777777
Q ss_pred CCcCCCccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCc
Q 039739 442 NNSLSGKIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNIS 494 (628)
Q Consensus 442 ~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 494 (628)
+|.+....+.+|.++++|++|++++|.+....+..|..+++|++|++++|++.
T Consensus 87 ~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred cccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence 77776666666777777777777777777666666777777777777777665
No 26
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.55 E-value=8.1e-15 Score=129.76 Aligned_cols=108 Identities=26% Similarity=0.364 Sum_probs=52.1
Q ss_pred cccEEEccCCcCCC-ccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCC-CCcccEEec
Q 039739 434 VLEGLFLNNNSLSG-KIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFH-PLSVEQVHL 511 (628)
Q Consensus 434 ~L~~L~l~~~~~~~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~-~~~L~~L~l 511 (628)
++++|++++|.++. ..+..|.++++|++|++++|.+....+..+..+++|++|++++|++....+..|. ++.|+.|+|
T Consensus 30 ~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L 109 (192)
T d1w8aa_ 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCccccccc
Confidence 45555555555543 2233445555555555555555555555555555555555555555533333322 333333333
Q ss_pred CCCcCcCCCCccccccCCCccEEECCCcccC
Q 039739 512 SKNMLHGQLKRGTFFNSYSLVTLDLSYNRLN 542 (628)
Q Consensus 512 ~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 542 (628)
++|+++ .+++++|..+++|++|+|++|.+.
T Consensus 110 ~~N~l~-~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 110 YDNQIS-CVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CSSCCC-EECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCcccc-ccCHHHhcCCcccccccccccccc
Confidence 333332 333333555555555555555554
No 27
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.46 E-value=1.2e-14 Score=141.92 Aligned_cols=110 Identities=14% Similarity=0.074 Sum_probs=59.0
Q ss_pred chhhhcccCCCCcEEecCCCCCCCcchhHhhcc---CCCCceEecccccccccccCCCccccCccceeecccchhhcCcc
Q 039739 22 TATQELHNFTNLEYLTLDSSSLHISLLQSIASI---FPSLKNLSMIGCEVNGLVRGQGFPHFKSLEHLDMEGALIALNTS 98 (628)
Q Consensus 22 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~---~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~ 98 (628)
.+...+.....|++|+|++|.++......++.. .++|+.|+++++........ .. .....
T Consensus 22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~---------------~~--~~~~~ 84 (344)
T d2ca6a1 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDE---------------IP--EALRL 84 (344)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGG---------------SH--HHHHH
T ss_pred HHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccc---------------cc--hHHHH
Confidence 355567777888888888888776666665542 34555555554322110000 00 00112
Q ss_pred hhhhhhccCCCccEEeeccccCCCCCCccccccccCCCCCcEEEccCCccc
Q 039739 99 FLQIIGESMPSLKYLSLFGSILGTNSSRILDRGLCSLVHLQVLNIAYNDLR 149 (628)
Q Consensus 99 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~ 149 (628)
+...+.. +++|++|++++|.++..++....+.+..+++|++|++++|.+.
T Consensus 85 l~~~l~~-~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~ 134 (344)
T d2ca6a1 85 LLQALLK-CPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 134 (344)
T ss_dssp HHHHHTT-CTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred HHHHHhh-CCCcccccccccccccccccchhhhhcccccchheeccccccc
Confidence 2333444 6667777777766644333333334556667777777766553
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=1.4e-13 Score=117.24 Aligned_cols=127 Identities=20% Similarity=0.159 Sum_probs=77.6
Q ss_pred ccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcCcCCCCccccccCCCcc
Q 039739 453 LGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNMLHGQLKRGTFFNSYSLV 532 (628)
Q Consensus 453 ~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~ 532 (628)
+.++..+++|++++|+++.. +..+..+++|+.|++++|++.. .+....+++|+.|++++|++. .+++..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~-l~~~~~l~~L~~L~ls~N~i~-~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRK-LDGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCE-ECCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCc-cCCcccCcchhhhhccccccc-CCCccccccccccc
Confidence 34445556666666655532 3334555666666666665552 233333455555555555553 44444456678888
Q ss_pred EEECCCcccCCccc-hhhcCCCCCcEEECCCCcCCccCCc----cccCCCCCcEEE
Q 039739 533 TLDLSYNRLNGNIS-DWVDGLSQLSHLILGHNNLEGEVPV----QLCKLNQLQLLD 583 (628)
Q Consensus 533 ~L~l~~~~~~~~~~-~~~~~l~~L~~L~l~~~~i~~~~~~----~l~~l~~L~~L~ 583 (628)
.|++++|++..... ..+..+++|+.|++++|+++ ..|. .+..+|+|+.||
T Consensus 91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~-~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEET
T ss_pred cceeccccccccccccccccccccchhhcCCCccc-cccchHHHHHHHCCCcCeeC
Confidence 88888888774322 45777888888888888887 4443 467788888776
No 29
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.39 E-value=7.5e-14 Score=136.28 Aligned_cols=245 Identities=19% Similarity=0.184 Sum_probs=136.3
Q ss_pred CCCccEEEcccccCCCc----ccccccCCCCccEEECcCCcccCc---cch------hhhcCCccccEEEccCCccCCcc
Q 039739 335 LPSLFSLNISMNALDGS----IPSSFGNMKFLQILDLSNNHLTGE---IPE------HLVVGCVNLESLALSNNSLEGHM 401 (628)
Q Consensus 335 ~~~L~~L~L~~~~~~~~----~~~~~~~~~~L~~L~l~~~~~~~~---~~~------~~~~~~~~L~~L~l~~~~l~~~~ 401 (628)
...++.|++++|.+... +...+...++|+.++++++..... .+. ..+..+++|++|++++|.+....
T Consensus 30 ~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 109 (344)
T d2ca6a1 30 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 109 (344)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccccc
Confidence 56788888888876532 333456677888888877643311 111 11234567777777777665543
Q ss_pred cc----cccCCCCCcEEEccCccCcCcccc-------------cccCCCcccEEEccCCcCCCc----cCccccCCCCcc
Q 039739 402 FS----RNFNLTNLRWLQLEGNHFVGEIPQ-------------SLSKCFVLEGLFLNNNSLSGK----IPRWLGNLTRLQ 460 (628)
Q Consensus 402 ~~----~~~~~~~L~~L~l~~~~~~~~~~~-------------~~~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~ 460 (628)
.. .+...++|+.|++++|.+...... .....+.|+.+.++++.+... +...+..++.|+
T Consensus 110 ~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~ 189 (344)
T d2ca6a1 110 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 189 (344)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred ccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhc
Confidence 22 223456777777777665321110 112344555555555544322 112233445555
Q ss_pred eEECCCCcCCCC-----CcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcCcCCCCccccccCCCccEEE
Q 039739 461 HIMMPKNHLEGP-----IPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLD 535 (628)
Q Consensus 461 ~L~l~~~~~~~~-----~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ 535 (628)
.|++++|.+... ....+..+++|+.|++++|+++.... ..+... +..+++|++|+
T Consensus 190 ~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~-------------------~~L~~~-l~~~~~L~~L~ 249 (344)
T d2ca6a1 190 TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGS-------------------SALAIA-LKSWPNLRELG 249 (344)
T ss_dssp EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHH-------------------HHHHHH-GGGCTTCCEEE
T ss_pred ccccccccccccccccchhhhhcchhhhccccccccccccccc-------------------cccccc-ccccccchhhh
Confidence 555555554321 11223344455555555444331100 012222 56788999999
Q ss_pred CCCcccCCccchh----hcC--CCCCcEEECCCCcCCccC----Ccccc-CCCCCcEEECCCCccccccccccccc
Q 039739 536 LSYNRLNGNISDW----VDG--LSQLSHLILGHNNLEGEV----PVQLC-KLNQLQLLDLSNNSLHGSIPLCLDNT 600 (628)
Q Consensus 536 l~~~~~~~~~~~~----~~~--l~~L~~L~l~~~~i~~~~----~~~l~-~l~~L~~L~l~~~~~~~~ip~~~~~~ 600 (628)
+++|.+++..... +.. .+.|++|++++|+|+... ...+. ++++|++|++++|.+. .-.+...++
T Consensus 250 Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~-~~~~~~~~l 324 (344)
T d2ca6a1 250 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS-EEDDVVDEI 324 (344)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC-TTSHHHHHH
T ss_pred hhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC-CcchHHHHH
Confidence 9999987553333 332 467999999999987543 33342 5788999999999987 344444443
No 30
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=1.2e-12 Score=111.23 Aligned_cols=129 Identities=19% Similarity=0.142 Sum_probs=81.0
Q ss_pred ccCCCCccEEECcCCcccCccchhhhcCCccccEEEccCCccCCcccccccCCCCCcEEEccCccCcCcccccccCCCcc
Q 039739 356 FGNMKFLQILDLSNNHLTGEIPEHLVVGCVNLESLALSNNSLEGHMFSRNFNLTNLRWLQLEGNHFVGEIPQSLSKCFVL 435 (628)
Q Consensus 356 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L 435 (628)
+.++.++++|++++|+++ .++. .+..+++|+.|++++|.+... ..+..+++|++|++++|.++...+..+..+++|
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~-~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred ccCcCcCcEEECCCCCCC-ccCc-cccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCcccccccccc
Confidence 445566777777777776 5543 334567777777777776542 345567777777777777764444445567777
Q ss_pred cEEEccCCcCCCccC-ccccCCCCcceEECCCCcCCCCC---cccccCCCCCCEEEc
Q 039739 436 EGLFLNNNSLSGKIP-RWLGNLTRLQHIMMPKNHLEGPI---PVEFCQLDWLQILDI 488 (628)
Q Consensus 436 ~~L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~~~~~~~~---~~~l~~l~~L~~L~l 488 (628)
++|++++|.+..... ..+..+++|++|++++|.+.... +..+..+|+|+.||-
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETT
T ss_pred ccceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeCC
Confidence 777777777653321 35666777777777777765322 123566777777763
No 31
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.30 E-value=8e-12 Score=100.64 Aligned_cols=101 Identities=28% Similarity=0.333 Sum_probs=49.1
Q ss_pred EEEccCCcCCCccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCCCCcccEEecCCCcC
Q 039739 437 GLFLNNNSLSGKIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSVEQVHLSKNML 516 (628)
Q Consensus 437 ~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~n~~ 516 (628)
+|++++|.++ .++ .+.+++.|++|++++|.+. ..|..+..+++|+.|++++|+++.
T Consensus 2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~--------------------- 57 (124)
T d1dcea3 2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN--------------------- 57 (124)
T ss_dssp EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC---------------------
T ss_pred EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc---------------------
Confidence 4444444444 222 2444555555555555554 233344555555555555554441
Q ss_pred cCCCCccccccCCCccEEECCCcccCCcc-chhhcCCCCCcEEECCCCcCC
Q 039739 517 HGQLKRGTFFNSYSLVTLDLSYNRLNGNI-SDWVDGLSQLSHLILGHNNLE 566 (628)
Q Consensus 517 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-~~~~~~l~~L~~L~l~~~~i~ 566 (628)
++ + +..+++|+.|++++|++++.. ...+..+++|+.|++++|+++
T Consensus 58 ---l~-~-~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 58 ---VD-G-VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp ---CG-G-GTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ---cC-c-cccccccCeEECCCCccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 11 1 444555555555555555332 134555566666666666554
No 32
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.29 E-value=3.8e-12 Score=102.55 Aligned_cols=103 Identities=28% Similarity=0.435 Sum_probs=71.3
Q ss_pred cEEeeccccCCCCCCccccccccCCCCCcEEEccCCcccccCchhhhcCCCCCEEEccccccccccCCCCCCCCCcccEE
Q 039739 111 KYLSLFGSILGTNSSRILDRGLCSLVHLQVLNIAYNDLRGSLPWCLANMTSLRILDVSSNQLTGSISSSPLVHLTSIEEL 190 (628)
Q Consensus 111 ~~L~l~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~l~~~~l~~l~~L~~L 190 (628)
|+|+++++.++. ++ .+..+++|++|++++|.+. .+|..+..+++|++|++++|.+. .++. +..+++|+++
T Consensus 1 R~L~Ls~n~l~~----l~--~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~~--~~~l~~L~~L 70 (124)
T d1dcea3 1 RVLHLAHKDLTV----LC--HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG--VANLPRLQEL 70 (124)
T ss_dssp SEEECTTSCCSS----CC--CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCGG--GTTCSSCCEE
T ss_pred CEEEcCCCCCCC----Cc--ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccCc--cccccccCeE
Confidence 467777777654 43 4677777777777777776 45666777777777777777776 5553 6777777777
Q ss_pred EcccCeeeeecCCCCcCCCCcccEEeccCCccc
Q 039739 191 YLSNNHFQIPISLEPFFNHSRLKSFYADNNEIN 223 (628)
Q Consensus 191 ~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 223 (628)
++++|.+........+..+++|+.+++++|++.
T Consensus 71 ~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 71 LLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp ECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ECCCCccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 777777764333445667777777777777664
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.14 E-value=6e-13 Score=117.49 Aligned_cols=133 Identities=23% Similarity=0.300 Sum_probs=85.0
Q ss_pred CccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEccCCcCcCCCCCCCC-CCcccEEecCCCcCcCCCCccccccC
Q 039739 450 PRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFH-PLSVEQVHLSKNMLHGQLKRGTFFNS 528 (628)
Q Consensus 450 ~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~-~~~L~~L~l~~n~~~~~~~~~~~~~~ 528 (628)
+..+..+++|++|++++|.+... + .+..+++|+.|++++|++.. .+.... +++|+.|++++|+++ .++ . +..+
T Consensus 41 ~~sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~~-i~~~~~~~~~L~~L~l~~N~i~-~l~-~-~~~l 114 (198)
T d1m9la_ 41 DATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIA-SLS-G-IEKL 114 (198)
T ss_dssp HHHHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEECS-CSSHHHHHHHCCEEECSEEECC-CHH-H-HHHH
T ss_pred hhHHhcccccceeECcccCCCCc-c-cccCCccccChhhccccccc-cccccccccccccccccccccc-ccc-c-cccc
Confidence 34555566666666666666533 2 35666666677776666652 232222 445666777766664 332 2 6677
Q ss_pred CCccEEECCCcccCCccc-hhhcCCCCCcEEECCCCcCCccCCcc----------ccCCCCCcEEECCCCccc
Q 039739 529 YSLVTLDLSYNRLNGNIS-DWVDGLSQLSHLILGHNNLEGEVPVQ----------LCKLNQLQLLDLSNNSLH 590 (628)
Q Consensus 529 ~~L~~L~l~~~~~~~~~~-~~~~~l~~L~~L~l~~~~i~~~~~~~----------l~~l~~L~~L~l~~~~~~ 590 (628)
++|+.|++++|+++.... ..+..+++|+.|++++|++....+.. +..+|+|+.|| +.+++
T Consensus 115 ~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD--~~~I~ 185 (198)
T d1m9la_ 115 VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES--SGGGT
T ss_pred ccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC--CccCC
Confidence 888899999888875432 46788888999999998876433322 56788888876 55554
No 34
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09 E-value=3.3e-10 Score=95.21 Aligned_cols=87 Identities=23% Similarity=0.154 Sum_probs=63.0
Q ss_pred CCcccEEecCCCcCcCCCCccccccCCCccEEECCCcccCCccchhhcCCCCCcEEECCCCcCCccCCccccCCCCCcEE
Q 039739 503 PLSVEQVHLSKNMLHGQLKRGTFFNSYSLVTLDLSYNRLNGNISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLL 582 (628)
Q Consensus 503 ~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L 582 (628)
.++++.|++.+++....++..+|.++++|+.|++++|+++...+..|..+++|++|+|++|+++ .+|.......+|++|
T Consensus 30 l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~~~~l~~L 108 (156)
T d2ifga3 30 AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQEL 108 (156)
T ss_dssp CSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTCSCCCCEE
T ss_pred ccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-ccChhhhcccccccc
Confidence 3444555554443223566666888888999999988888777788888889999999999888 555544445578899
Q ss_pred ECCCCccc
Q 039739 583 DLSNNSLH 590 (628)
Q Consensus 583 ~l~~~~~~ 590 (628)
+|++|++.
T Consensus 109 ~L~~Np~~ 116 (156)
T d2ifga3 109 VLSGNPLH 116 (156)
T ss_dssp ECCSSCCC
T ss_pred ccCCCccc
Confidence 99888874
No 35
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.08 E-value=8e-12 Score=110.11 Aligned_cols=130 Identities=18% Similarity=0.226 Sum_probs=78.6
Q ss_pred hhHhhccCCCCceEecccccccccccCCCccccCccceeecccchhhcCcchhhhhhccCCCccEEeeccccCCCCCCcc
Q 039739 48 LQSIASIFPSLKNLSMIGCEVNGLVRGQGFPHFKSLEHLDMEGALIALNTSFLQIIGESMPSLKYLSLFGSILGTNSSRI 127 (628)
Q Consensus 48 ~~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 127 (628)
...+.. +++|++|++++|.+... + .+.++++|++|++++|.+ . .++..... +++|++|++++|.+.. +
T Consensus 41 ~~sl~~-L~~L~~L~Ls~n~I~~i-~--~l~~l~~L~~L~Ls~N~i--~-~i~~~~~~-~~~L~~L~l~~N~i~~----l 108 (198)
T d1m9la_ 41 DATLST-LKACKHLALSTNNIEKI-S--SLSGMENLRILSLGRNLI--K-KIENLDAV-ADTLEELWISYNQIAS----L 108 (198)
T ss_dssp HHHHHH-TTTCCEEECSEEEESCC-C--CHHHHTTCCEEECCEEEE--C-SCSSHHHH-HHHCCEEECSEEECCC----H
T ss_pred hhHHhc-ccccceeECcccCCCCc-c--cccCCccccChhhccccc--c-cccccccc-cccccccccccccccc----c
Confidence 455666 77777777777766642 2 466777777777777632 2 22222222 4567777777776654 4
Q ss_pred ccccccCCCCCcEEEccCCcccccC-chhhhcCCCCCEEEccccccccccCCC---------CCCCCCcccEEE
Q 039739 128 LDRGLCSLVHLQVLNIAYNDLRGSL-PWCLANMTSLRILDVSSNQLTGSISSS---------PLVHLTSIEELY 191 (628)
Q Consensus 128 ~~~~l~~l~~L~~L~L~~~~~~~~~-~~~l~~l~~L~~L~l~~~~~~~~l~~~---------~l~~l~~L~~L~ 191 (628)
+ .+..+++|++|++++|.+.... ...+..+++|++|++++|++....+.. .+..+++|+.||
T Consensus 109 ~--~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 109 S--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp H--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred c--cccccccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 2 4666777777777777766321 135667777777777777765322221 134567777775
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.04 E-value=2.8e-10 Score=95.59 Aligned_cols=105 Identities=23% Similarity=0.183 Sum_probs=58.3
Q ss_pred CcEEEccCccCcCcccccccCCCcccEEEccCCc-CCCccCccccCCCCcceEECCCCcCCCCCcccccCCCCCCEEEcc
Q 039739 411 LRWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNS-LSGKIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDIS 489 (628)
Q Consensus 411 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~-~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~ 489 (628)
.++++..++... ..|..+..+++|++|++.++. +....+.+|.++++|+.|++++|++....+..|..+++|++|+++
T Consensus 10 ~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceecc
Confidence 344555555444 334455556666666665443 444444556666666666666666665556666666666666666
Q ss_pred CCcCcCCCCCCCCCCcccEEecCCCcC
Q 039739 490 DNNISGSLPSCFHPLSVEQVHLSKNML 516 (628)
Q Consensus 490 ~~~~~~~~~~~~~~~~L~~L~l~~n~~ 516 (628)
+|++....+..+....++.|++++|++
T Consensus 89 ~N~l~~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 89 FNALESLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCC
T ss_pred CCCCcccChhhhccccccccccCCCcc
Confidence 666664333344333444444444444
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.11 E-value=8.5e-07 Score=74.38 Aligned_cols=88 Identities=23% Similarity=0.198 Sum_probs=55.9
Q ss_pred hhcccCCCCcEEecCCCCCCCcc--hhHhhccCCCCceEecccccccccccCCCccccCccceeecccchhhcCc----c
Q 039739 25 QELHNFTNLEYLTLDSSSLHISL--LQSIASIFPSLKNLSMIGCEVNGLVRGQGFPHFKSLEHLDMEGALIALNT----S 98 (628)
Q Consensus 25 ~~~~~~~~L~~L~l~~~~~~~~~--~~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~----~ 98 (628)
..+..+++|++|++++|.++... ...+.. +++|+.|++++|.+...... .+.+...|+.|++++|++.... .
T Consensus 59 ~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~-l~~L~~L~Ls~N~i~~l~~l-~~l~~~~L~~L~L~~Npl~~~~~~~~~ 136 (162)
T d1koha1 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQK-APNLKILNLSGNELKSEREL-DKIKGLKLEELWLDGNSLSDTFRDQST 136 (162)
T ss_dssp HHHHHCTTCCCCCCCSSCCCCCSGGGTHHHH-STTCCCCCCTTSCCCCGGGH-HHHTTCCCSSCCCTTSTTSSSSSSHHH
T ss_pred HHHHhCCCCCEeeCCCccccCCchhHHHHhh-CCcccccccccCccccchhh-hhhhccccceeecCCCCcCcCcccchh
Confidence 34456888888888888887532 344555 88888888888887754332 2233456888888888542211 1
Q ss_pred hhhhhhccCCCccEEe
Q 039739 99 FLQIIGESMPSLKYLS 114 (628)
Q Consensus 99 ~~~~~~~~~~~L~~L~ 114 (628)
....+.+.+|+|++||
T Consensus 137 y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 137 YISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHTTSTTCCEET
T ss_pred HHHHHHHHCCCCCEEC
Confidence 1123333389999886
No 38
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.09 E-value=7.9e-07 Score=75.00 Aligned_cols=40 Identities=10% Similarity=0.207 Sum_probs=20.0
Q ss_pred ccCCCCcEEecCCC-CCCCcchhHhhcc---CCCCceEeccccc
Q 039739 28 HNFTNLEYLTLDSS-SLHISLLQSIASI---FPSLKNLSMIGCE 67 (628)
Q Consensus 28 ~~~~~L~~L~l~~~-~~~~~~~~~l~~~---~~~L~~L~l~~~~ 67 (628)
.+.+.|++|+|+++ .++......++.. .++|++|++++|.
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~ 55 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTA 55 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSC
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccc
Confidence 34567777777763 4655444444331 2334444444443
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.09 E-value=3.6e-07 Score=77.19 Aligned_cols=67 Identities=15% Similarity=0.212 Sum_probs=46.1
Q ss_pred CCCCCCEEeCCCC-CCCC--ccchhhhcccCCCCcEEecCCCCCCCcchhHhhcc---CCCCceEeccccccc
Q 039739 3 SFPSLNTLYLSSN-NFTD--IATATQELHNFTNLEYLTLDSSSLHISLLQSIASI---FPSLKNLSMIGCEVN 69 (628)
Q Consensus 3 ~l~~L~~L~l~~~-~~~~--~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~---~~~L~~L~l~~~~~~ 69 (628)
+.+.|++|+|+++ .+.. +..+..++...++|++|++++|.+++.....++.. .+.|++|++++|.+.
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~ 85 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 85 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcc
Confidence 5689999999985 4533 23466778889999999999999986555555441 344555555554443
No 40
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.85 E-value=3e-06 Score=71.36 Aligned_cols=26 Identities=23% Similarity=0.345 Sum_probs=13.9
Q ss_pred cccCCCCcEEecCC-CCCCCcchhHhh
Q 039739 27 LHNFTNLEYLTLDS-SSLHISLLQSIA 52 (628)
Q Consensus 27 ~~~~~~L~~L~l~~-~~~~~~~~~~l~ 52 (628)
..+.+.|++|++++ +.++......++
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~ 39 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACA 39 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHH
Confidence 34456666666665 345544444444
No 41
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.85 E-value=2.5e-06 Score=71.46 Aligned_cols=59 Identities=24% Similarity=0.095 Sum_probs=40.8
Q ss_pred cccCCCccEEECCCcccCCccchhhcCCCCCcEEECCCCcCCccCCc-------cccCCCCCcEEE
Q 039739 525 FFNSYSLVTLDLSYNRLNGNISDWVDGLSQLSHLILGHNNLEGEVPV-------QLCKLNQLQLLD 583 (628)
Q Consensus 525 ~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~-------~l~~l~~L~~L~ 583 (628)
+..+++|+.|++++|.+++..+-.+.....|+.|++++|++.....+ .+..+|+|+.||
T Consensus 87 ~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 87 VQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred HhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 56678888888888888754443444455788888888888754332 256678888776
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.72 E-value=6.9e-06 Score=69.09 Aligned_cols=51 Identities=14% Similarity=0.197 Sum_probs=27.7
Q ss_pred CCCCCCEEeCCCC-CCCC--ccchhhhcccCCCCcEEecCCCCCCCcchhHhhc
Q 039739 3 SFPSLNTLYLSSN-NFTD--IATATQELHNFTNLEYLTLDSSSLHISLLQSIAS 53 (628)
Q Consensus 3 ~l~~L~~L~l~~~-~~~~--~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~ 53 (628)
+.+.|++|+++++ .++. +..+..++..+++|++|++++|.++......++.
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~ 68 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAE 68 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHH
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHH
Confidence 3456666666653 3422 1224455555666666666666666555555554
Done!