Query 039742
Match_columns 183
No_of_seqs 172 out of 312
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 22:17:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039742.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039742hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x5wa2 g.37.1.1 (A:36-64) Zin 24.8 9.3 0.00068 20.4 0.4 20 146-169 8-27 (29)
2 d1owxa_ d.58.7.1 (A:) Lupus LA 16.3 99 0.0072 19.8 4.6 40 1-43 5-44 (113)
3 d1y9ua_ c.94.1.1 (A:) Ferric-b 15.5 91 0.0066 22.1 4.6 37 2-43 22-59 (318)
4 d1p8ba_ g.3.6.4 (A:) Pab1, sub 15.2 15 0.0011 20.6 -0.1 10 153-162 2-11 (37)
5 d1y4ta_ c.94.1.1 (A:) Ferric-b 14.1 24 0.0018 25.8 0.8 36 2-41 22-58 (317)
6 d1xvxa_ c.94.1.1 (A:) Ferric-b 13.6 25 0.0018 26.4 0.8 36 2-41 25-61 (311)
7 d1amfa_ c.94.1.1 (A:) Molybdat 13.3 46 0.0034 22.6 2.2 45 2-52 23-67 (231)
8 d1ju8a_ g.3.6.4 (A:) Leginsuli 12.6 23 0.0017 19.8 0.2 10 153-162 2-11 (37)
9 d1q35a_ c.94.1.1 (A:) Ferric-b 12.3 55 0.004 24.2 2.5 35 2-41 23-58 (318)
10 d1nnfa_ c.94.1.1 (A:) Ferric-b 11.5 66 0.0048 23.2 2.7 36 2-41 21-57 (308)
No 1
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.78 E-value=9.3 Score=20.35 Aligned_cols=20 Identities=35% Similarity=0.443 Sum_probs=14.2
Q ss_pred eeeeeecccccccchHHHHHHhhc
Q 039742 146 CVASFDWSCSGICKSVERMKIGHN 169 (183)
Q Consensus 146 c~~~~~~~c~g~c~~~~~~~~~h~ 169 (183)
| |||.+-.. +-...|+.+|.
T Consensus 8 C--sFDtkq~S--nL~kH~kk~H~ 27 (29)
T d1x5wa2 8 C--SFDTKQPS--NLSKHMKKFHG 27 (29)
T ss_dssp S--SCEESSHH--HHHHHHHHHHS
T ss_pred e--cccccCcc--hHHHHHHHHcc
Confidence 7 88885444 56678888885
No 2
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.28 E-value=99 Score=19.82 Aligned_cols=40 Identities=13% Similarity=0.209 Sum_probs=29.2
Q ss_pred CCCCCCeEEEEEeecCCCCChhHHHHHHHHHHhcCCEEeecch
Q 039742 1 MEKGKGIVIRFVIGHSATPGGVLDKAIDAEDAEHQDFLTLNHV 43 (183)
Q Consensus 1 le~~~gv~~rFvIG~s~~~~~~ld~~L~~E~~~ygDiL~ld~~ 43 (183)
+|.-.|++.+||=+..... ..+.|.+--.+||+|..++..
T Consensus 5 ~~~~~g~~~~fvgnL~~~~---tee~Lk~~F~~fG~V~~v~i~ 44 (113)
T d1owxa_ 5 LEEKIGCLLKFSGDLDDQT---CREDLHILFSNHGEIKWIDFV 44 (113)
T ss_dssp CSCCCCCEEEEEESCCSSC---CHHHHHHHTCSSCCEEEEECC
T ss_pred cCCCCCCeEEEECCCCCCC---CHHHHHHHHHhcCChheEEEe
Confidence 4667898888875554332 346788888999999999854
No 3
>d1y9ua_ c.94.1.1 (A:) Ferric-binding protein FbpA {Bordetella pertussis [TaxId: 520]}
Probab=15.45 E-value=91 Score=22.05 Aligned_cols=37 Identities=27% Similarity=0.358 Sum_probs=24.2
Q ss_pred CCCCCeEEEEEeecCCCCChhHHHHHHHHHHh-cCCEEeecch
Q 039742 2 EKGKGIVIRFVIGHSATPGGVLDKAIDAEDAE-HQDFLTLNHV 43 (183)
Q Consensus 2 e~~~gv~~rFvIG~s~~~~~~ld~~L~~E~~~-ygDiL~ld~~ 43 (183)
|+++||.|+++-+.+ + +..+|..|... --|++.....
T Consensus 22 ek~tGIkV~~~~~~~---~--~~~kl~ae~~~~~~DVv~~~~~ 59 (318)
T d1y9ua_ 22 AKDSGIKVNTVFVKD---G--LLERVRAEGDKSPADVLMTVDI 59 (318)
T ss_dssp HHHHCCEEEEEECSS---C--HHHHHHHHGGGCCCCEEEEESH
T ss_pred HHhhCCEEEEEECCH---H--HHHHHHhcCCCCCCCEEEeCCH
Confidence 677899999864432 2 44577777553 4698876543
No 4
>d1p8ba_ g.3.6.4 (A:) Pab1, subunit b {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=15.20 E-value=15 Score=20.57 Aligned_cols=10 Identities=50% Similarity=1.331 Sum_probs=8.0
Q ss_pred ccccccchHH
Q 039742 153 SCSGICKSVE 162 (183)
Q Consensus 153 ~c~g~c~~~~ 162 (183)
.|+|+|.|-+
T Consensus 2 ~C~G~CSPFe 11 (37)
T d1p8ba_ 2 SCNGVCSPFE 11 (37)
T ss_dssp CCEEEECTTC
T ss_pred cccccccccc
Confidence 4999999865
No 5
>d1y4ta_ c.94.1.1 (A:) Ferric-binding protein FbpA {Campylobacter jejuni [TaxId: 197]}
Probab=14.12 E-value=24 Score=25.75 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=25.5
Q ss_pred CCCCCeEEEEEeecCCCCChhHHHHHHHHHHhc-CCEEeec
Q 039742 2 EKGKGIVIRFVIGHSATPGGVLDKAIDAEDAEH-QDFLTLN 41 (183)
Q Consensus 2 e~~~gv~~rFvIG~s~~~~~~ld~~L~~E~~~y-gDiL~ld 41 (183)
|+++||.|.++-+.++ ++..+|.+|.... .|++...
T Consensus 22 ek~tGIkV~~~~~~~~----~~~~kl~ae~~~~~~Dv~~~~ 58 (317)
T d1y4ta_ 22 EEKTGIKVNHTQAKAS----ELIKRLSLEGSNSPADIFITA 58 (317)
T ss_dssp HHHHCCCEEEEECCHH----HHHHHHHHHGGGCCCCEEEES
T ss_pred HHHhCCEEEEEECCcH----HHHHHHHHcCCCCCCeEEEeC
Confidence 6778999999876542 3556788886654 3888754
No 6
>d1xvxa_ c.94.1.1 (A:) Ferric-binding protein FbpA {Yersinia enterocolitica, YfuA [TaxId: 630]}
Probab=13.58 E-value=25 Score=26.38 Aligned_cols=36 Identities=19% Similarity=0.283 Sum_probs=25.2
Q ss_pred CCCCCeEEEEEeecCCCCChhHHHHHHHHHHhc-CCEEeec
Q 039742 2 EKGKGIVIRFVIGHSATPGGVLDKAIDAEDAEH-QDFLTLN 41 (183)
Q Consensus 2 e~~~gv~~rFvIG~s~~~~~~ld~~L~~E~~~y-gDiL~ld 41 (183)
|+++||.|.++-|.+ +++..+|..|-..- .|++...
T Consensus 25 ek~tGI~V~~~~~~s----~~l~~ki~aeg~~~~~Dv~~~~ 61 (311)
T d1xvxa_ 25 TKDTGIKVTLRNGGD----SELGNQLVQEGSASPADVFLTE 61 (311)
T ss_dssp HHHHCCCEEEEECCH----HHHHHHHHHHGGGCCCSEEEES
T ss_pred HHhhCCEEEEEECCh----HHHHHHHHHcCCCCCCCEEEEC
Confidence 567899999987654 24667788875433 3998754
No 7
>d1amfa_ c.94.1.1 (A:) Molybdate-binding protein, ModA {Escherichia coli [TaxId: 562]}
Probab=13.25 E-value=46 Score=22.65 Aligned_cols=45 Identities=18% Similarity=0.256 Sum_probs=29.0
Q ss_pred CCCCCeEEEEEeecCCCCChhHHHHHHHHHHhcCCEEeecchhhHHHHHHc
Q 039742 2 EKGKGIVIRFVIGHSATPGGVLDKAIDAEDAEHQDFLTLNHVSMLVNSLAN 52 (183)
Q Consensus 2 e~~~gv~~rFvIG~s~~~~~~ld~~L~~E~~~ygDiL~ld~~~~L~~~L~~ 52 (183)
|+++||.|.++-|.|+ .+.++|+++ ...|++..-....+...+.+
T Consensus 23 ek~~gi~V~~~~~~sg----~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~ 67 (231)
T d1amfa_ 23 KKEKGVDVVSSFASSS----TLARQIEAG--APADLFISADQKWMDYAVDK 67 (231)
T ss_dssp HHHHCCEEEEEEECHH----HHHHHHHHT--CCCSEEECSSHHHHHHHHHT
T ss_pred HHhhCCEEEEEECChH----HHHHHHHhC--CCceEEEecchhhhHHHHhc
Confidence 5678999999888654 356667554 56677666444444455554
No 8
>d1ju8a_ g.3.6.4 (A:) Leginsulin {Soybean (Glycine max) [TaxId: 3847]}
Probab=12.65 E-value=23 Score=19.75 Aligned_cols=10 Identities=40% Similarity=1.145 Sum_probs=7.9
Q ss_pred ccccccchHH
Q 039742 153 SCSGICKSVE 162 (183)
Q Consensus 153 ~c~g~c~~~~ 162 (183)
.|+|+|.|-+
T Consensus 2 ~C~G~CspFe 11 (37)
T d1ju8a_ 2 DCNGACSPFE 11 (37)
T ss_dssp CSCSEECSSS
T ss_pred Cccccccccc
Confidence 3899999864
No 9
>d1q35a_ c.94.1.1 (A:) Ferric-binding protein FbpA {Mannheimia haemolytica [TaxId: 75985]}
Probab=12.29 E-value=55 Score=24.20 Aligned_cols=35 Identities=23% Similarity=0.353 Sum_probs=21.9
Q ss_pred CCCCCeEEEEEeecCCCCChhHHHHHHHHHH-hcCCEEeec
Q 039742 2 EKGKGIVIRFVIGHSATPGGVLDKAIDAEDA-EHQDFLTLN 41 (183)
Q Consensus 2 e~~~gv~~rFvIG~s~~~~~~ld~~L~~E~~-~ygDiL~ld 41 (183)
|+++||.|+++-|.++ +..+|..|.. ---|++...
T Consensus 23 ek~tGIkV~~~~~~~~-----~~~kl~~e~~~~~~Dvv~~~ 58 (318)
T d1q35a_ 23 EKDTGIKVNIIFADKG-----LVDRVKQEGELSPADVLLTV 58 (318)
T ss_dssp HHHHCCEEEEEECC-C-----CHHHHHHHGGGCCCCEEEES
T ss_pred HHhhCCEEEEEECCHH-----HHHHHHhcCCCCCCCEEEEC
Confidence 6778999999866432 2345666654 346876543
No 10
>d1nnfa_ c.94.1.1 (A:) Ferric-binding protein FbpA {Haemophilus influenzae [TaxId: 727]}
Probab=11.50 E-value=66 Score=23.20 Aligned_cols=36 Identities=22% Similarity=0.331 Sum_probs=24.1
Q ss_pred CCCCCeEEEEEeecCCCCChhHHHHHHHHHHhc-CCEEeec
Q 039742 2 EKGKGIVIRFVIGHSATPGGVLDKAIDAEDAEH-QDFLTLN 41 (183)
Q Consensus 2 e~~~gv~~rFvIG~s~~~~~~ld~~L~~E~~~y-gDiL~ld 41 (183)
|+++||+|+++-|.+ +++..+|.+|...- -|++...
T Consensus 21 ek~tGIkV~~~~~~~----~~~~~kl~ae~~~~~~DV~~~~ 57 (308)
T d1nnfa_ 21 EQETGIKVTLNSGKS----EQLAGQLKEEGDKTPADVFYTE 57 (308)
T ss_dssp HHHSCCCEEEEECCH----HHHHHHHHHHGGGCCCSEEEES
T ss_pred HHhhCCEEEEEECCh----HHHHHHHHHccCCCCCCEEEEC
Confidence 677999999986544 23556777775432 3987653
Done!