BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039745
(127 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRP--LKS--RKEVDLLKNQLQAVITADESARRSMVDPA 56
G+L +K D+Y FG++L E++ R ++S R+ V+L + AV + + +VDP
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE---WAVESHNNGQLEQIVDPN 272
Query: 57 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
+ ESL+ + V+CL + +RPS+ DVLW L++A ++Q++
Sbjct: 273 LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRP--LKS--RKEVDLLKNQLQAVITADESARRSMVDPA 56
G+L +K D+Y FG++L E++ R ++S R+ V+L + AV + + +VDP
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE---WAVESHNNGQLEQIVDPN 272
Query: 57 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDA 103
+ ESL+ + V+CL + +RPS+ DVLW L++A ++Q++
Sbjct: 273 LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGR------PLKSRKEVDLLKNQLQAVITADESARRSMVD 54
GK +K D++ +G++LLE+I G+ L + +V LL + ++ ++ E ++VD
Sbjct: 218 GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL-DWVKGLLK--EKKLEALVD 274
Query: 55 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHS-QSSEGSP 113
+ DE ++ +++V + C +P ERP + +V+ L+ + + W Q E
Sbjct: 275 VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE-GDGLAERWEEWQKEEMFR 333
Query: 114 ISPPWPSH 121
+P+H
Sbjct: 334 QDFNYPTH 341
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGR------PLKSRKEVDLLKNQLQAVITADESARRSMVD 54
GK +K D++ +G++LLE+I G+ L + +V LL + ++ ++ E ++VD
Sbjct: 210 GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL-DWVKGLLK--EKKLEALVD 266
Query: 55 PAVNKACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
+ DE ++ +++V + C +P ERP + +V+ L+
Sbjct: 267 VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRP-LKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ K DIY FG++LLEII G P + +E LL + + + E +D +N
Sbjct: 203 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE-EKTIEDYIDKKMND 261
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
A S++ M V +CL + +RP ++ V LQ
Sbjct: 262 AD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRP-LKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ K DIY FG++LLEII G P + +E LL + + + E +D +N
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE-EKTIEDYIDKKMND 267
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
A S++ M V +CL + +RP ++ V LQ
Sbjct: 268 AD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRP-LKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ K DIY FG++LLEII G P + +E LL + + + E +D +N
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE-EKTIEDYIDKKMND 267
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
A S++ M V +CL + +RP ++ V LQ
Sbjct: 268 AD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRP-LKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ K DIY FG++LLEII G P + +E LL + + + E +D N
Sbjct: 200 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE-EKTIEDYIDKKXND 258
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQ 95
A S++ V +CL + +RP ++ V LQ
Sbjct: 259 AD-STSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 5 DKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
+K D++ +G+IL E+I RK D + ++ A + R P + L +
Sbjct: 183 EKCDVFSWGIILWEVIT-----RRKPFDEIGGPAFRIMWAVHNGTRP---PLIKN--LPK 232
Query: 65 SLKTMMEVCVRCLLKNPAERPSVEDVL 91
++++M RC K+P++RPS+E+++
Sbjct: 233 PIESLM---TRCWSKDPSQRPSMEEIV 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 5 DKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
+K D++ +G+IL E+I RK D + ++ A + R P + L +
Sbjct: 182 EKCDVFSWGIILWEVIT-----RRKPFDEIGGPAFRIMWAVHNGTRP---PLIKN--LPK 231
Query: 65 SLKTMMEVCVRCLLKNPAERPSVEDVL 91
++++M RC K+P++RPS+E+++
Sbjct: 232 PIESLM---TRCWSKDPSQRPSMEEIV 255
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 22/94 (23%)
Query: 1 GKLEDKIDIYDFGLILLEIIV-GR---PLKSRKEVDLLKNQLQAVITADESARRSMVDPA 56
G K D++ FG++L+EI+ GR P S E VI A E R M P
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE----------VIRALERGYR-MPRP- 391
Query: 57 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 90
+ C +E MM RC P ERP+ E +
Sbjct: 392 --ENCPEELYNIMM----RCWKNRPEERPTFEYI 419
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 22/94 (23%)
Query: 1 GKLEDKIDIYDFGLILLEIIV-GR---PLKSRKEVDLLKNQLQAVITADESARRSMVDPA 56
G K D++ FG++L+EI+ GR P S E VI A E R M P
Sbjct: 187 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE----------VIRALERGYR-MPRP- 234
Query: 57 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 90
+ C +E MM RC P ERP+ E +
Sbjct: 235 --ENCPEELYNIMM----RCWKNRPEERPTFEYI 262
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 22/94 (23%)
Query: 1 GKLEDKIDIYDFGLILLEIIV-GR---PLKSRKEVDLLKNQLQAVITADESARRSMVDPA 56
G K D++ FG++L+EI+ GR P S E VI A E R M P
Sbjct: 360 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE----------VIRALERGYR-MPRP- 407
Query: 57 VNKACLDESLKTMMEVCVRCLLKNPAERPSVEDV 90
+ C +E MM RC P ERP+ E +
Sbjct: 408 --ENCPEELYNIMM----RCWKNRPEERPTFEYI 435
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + E R + P ++K K
Sbjct: 207 DVYAFGIVLYELMTGQLPYSN-----INNRDQII----EMVGRGSLSPDLSK-VRSNCPK 256
Query: 68 TMMEVCVRCLLKNPAERPSVEDVL 91
M + CL K ERPS +L
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRIL 280
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + E R + P ++K K
Sbjct: 207 DVYAFGIVLYELMTGQLPYSN-----INNRDQII----EMVGRGSLSPDLSK-VRSNCPK 256
Query: 68 TMMEVCVRCLLKNPAERPSVEDVL 91
M + CL K ERPS +L
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + E R + P ++K K
Sbjct: 195 DVYAFGIVLYELMTGQLPYSN-----INNRDQII----EMVGRGSLSPDLSK-VRSNCPK 244
Query: 68 TMMEVCVRCLLKNPAERPSVEDVL 91
M + CL K ERPS +L
Sbjct: 245 RMKRLMAECLKKKRDERPSFPRIL 268
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + R + P ++K K
Sbjct: 196 DVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPDLSK-VRSNCPK 245
Query: 68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 99
M + CL K ERP +L +++ A+
Sbjct: 246 AMKRLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + R + P ++K K
Sbjct: 196 DVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPDLSK-VRSNCPK 245
Query: 68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 99
M + CL K ERP +L +++ A+
Sbjct: 246 AMKRLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + R + P ++K K
Sbjct: 219 DVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPDLSK-VRSNCPK 268
Query: 68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 99
M + CL K ERP +L +++ A+
Sbjct: 269 AMKRLMAECLKKKRDERPLFPQILASIELLAR 300
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + R + P ++K K
Sbjct: 193 DVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPDLSK-VRSNCPK 242
Query: 68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 99
M + CL K ERP +L +++ A+
Sbjct: 243 AMKRLMAECLKKKRDERPLFPQILASIELLAR 274
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + R + P ++K K
Sbjct: 218 DVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPDLSK-VRSNCPK 267
Query: 68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 99
M + CL K ERP +L +++ A+
Sbjct: 268 AMKRLMAECLKKKRDERPLFPQILASIELLAR 299
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + R + P ++K K
Sbjct: 211 DVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPDLSK-VRSNCPK 260
Query: 68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 99
M + CL K ERP +L +++ A+
Sbjct: 261 AMKRLMAECLKKKRDERPLFPQILASIELLAR 292
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + R + P ++K K
Sbjct: 219 DVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPDLSK-VRSNCPK 268
Query: 68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 99
M + CL K ERP +L +++ A+
Sbjct: 269 AMKRLMAECLKKKRDERPLFPQILASIELLAR 300
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + R + P ++K K
Sbjct: 191 DVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPDLSK-VRSNCPK 240
Query: 68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 99
M + CL K ERP +L +++ A+
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + R + P ++K K
Sbjct: 191 DVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPDLSK-VRSNCPK 240
Query: 68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 99
M + CL K ERP +L +++ A+
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y FG++L E++ G+ S + N+ Q + R + P ++K K
Sbjct: 191 DVYAFGIVLYELMTGQLPYSN-----INNRDQIIFMVG----RGYLSPDLSK-VRSNCPK 240
Query: 68 TMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQ 99
M + CL K ERP +L +++ A+
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A D R S V+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQDTYKRISRVEFTFP- 226
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 227 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 227
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGS 112
D + ++ R L NP++RP + +VL + A +SQ+ E +
Sbjct: 228 ---DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNSQNKESA 277
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E++ K R + N+ E R P
Sbjct: 181 GRFTIKSDVWSFGILLTELVT----KGRVPYPGMNNR-----EVLEQVERGYRMP----- 226
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C + ++ E+ + C K+P ERP+ E
Sbjct: 227 CPQDCPISLHELMIHCWKKDPEERPTFE 254
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESAR--RSMV-----DPAV-NK 59
D+Y FGLIL E V R S V+ + ++ +D S R +V P+ N+
Sbjct: 234 DMYSFGLILWE--VARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNR 291
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVLWNLQFAAQVQD 102
DE L+ M ++ C NPA R + V L ++ QD
Sbjct: 292 WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
++K+D++ FG++L EII GR + D L + + R +D + C
Sbjct: 200 DEKVDVFSFGIVLCEII-GR---VNADPDYLPRTMDFGLNV-----RGFLD----RYCPP 246
Query: 64 ESLKTMMEVCVRCLLKNPAERPS 86
+ + VRC +P +RPS
Sbjct: 247 NCPPSFFPITVRCCDLDPEKRPS 269
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 252
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 253 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 228
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 229 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 182 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 228
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 229 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 231
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 232 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 252
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 253 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 229
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 230 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 226
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 227 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 229
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 230 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 231
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 232 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 226
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 227 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 227
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 228 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 227
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 228 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 229
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 230 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 231
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 232 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 179 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 225
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 226 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 226
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 227 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 185 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 231
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 232 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 226
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 227 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 197 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 243
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 244 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 226
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 227 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 229
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 230 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 16/88 (18%)
Query: 4 EDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
++K+D++ G++ E +VG+P +A + R S V+ D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP----D 232
Query: 64 ESLKTMMEVCVRCLLKNPAERPSVEDVL 91
+ ++ R L NP++RP + +VL
Sbjct: 233 FVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 226
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 227 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 230
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 231 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 28.9 bits (63), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 229
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 230 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 28.9 bits (63), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 183 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 229
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 230 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 177 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 223
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 224 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 1 GKLED-KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNK 59
G++ D K+D++ G++ E +VG+P +A + R S V+
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKP------------PFEANTYQETYKRISRVEFTFP- 226
Query: 60 ACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
D + ++ R L NP++RP + +VL
Sbjct: 227 ---DFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|4IZO|A Chain A, Crystal Structure Of Kinase Phosphoribosylaminoimidazole
Carboxylase, Atpase Subunit From Burkholderia
Thailandensis
Length = 419
Score = 28.5 bits (62), Expect = 0.93, Method: Composition-based stats.
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 102 DAWHSQSSEGSPISPPW 118
D W + + G P++PPW
Sbjct: 349 DVWFASGASGEPVTPPW 365
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 9/42 (21%)
Query: 75 RCLLKNPAERPSVEDVLWNLQFAAQVQDAWHSQSSEGSPISP 116
RCL P+ RPS+E++L D W +E P++P
Sbjct: 266 RCLAPKPSSRPSLEEIL---------LDPWMQTPAEDVPLNP 298
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 190 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 235
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K+P ERP+ E
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 190 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 235
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K+P ERP+ E
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 190 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 235
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K+P ERP+ E
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 190 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 235
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K+P ERP+ E
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 179 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 224
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K+P ERP+ E
Sbjct: 225 CPPECPESLHDLMCQCWRKDPEERPTFE 252
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 190 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 235
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K+P ERP+ E
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 28.1 bits (61), Expect = 1.5, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 357 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYR--------MP 402
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K+P ERP+ E
Sbjct: 403 CPPECPESLHDLMCQCWRKDPEERPTFE 430
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 190 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 235
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K+P ERP+ E
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 190 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 235
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K+P ERP+ E
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 190 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 235
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K+P ERP+ E
Sbjct: 236 CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 181 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 226
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K+P ERP+ E
Sbjct: 227 CPPECPESLHDLMCQCWRKDPEERPTFE 254
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 6 KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITAD---ESARRSM-VD---PAV- 57
++DI+ FGL+L E V R + S V+ K V+ D E R+ + VD P +
Sbjct: 203 RVDIWAFGLVLWE--VARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIP 260
Query: 58 NKACLDESLKTMMEVCVRCLLKNPAER 84
N+ D +L ++ ++ C +NP+ R
Sbjct: 261 NRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 187 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 232
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K P ERP+ E
Sbjct: 233 CPPECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 6 KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITAD---ESARRSM-VD---PAV- 57
++DI+ FGL+L E V R + S V+ K V+ D E R+ + VD P +
Sbjct: 203 RVDIWAFGLVLWE--VARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIP 260
Query: 58 NKACLDESLKTMMEVCVRCLLKNPAER 84
N+ D +L ++ ++ C +NP+ R
Sbjct: 261 NRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 6 KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
K DI+ FG+ +E+ G P + +L LQ + E+ + +K L +
Sbjct: 202 KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ-------DKEMLKK 254
Query: 65 SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 96
K+ ++ CL K+P +RP+ ++L + F
Sbjct: 255 YGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 286
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 6 KIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITAD---ESARRSM-VD---PAV- 57
++DI+ FGL+L E V R + S V+ K V+ D E R+ + VD P +
Sbjct: 232 RVDIWAFGLVLWE--VARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIP 289
Query: 58 NKACLDESLKTMMEVCVRCLLKNPAER 84
N+ D +L ++ ++ C +NP+ R
Sbjct: 290 NRWFSDPTLTSLAKLMKECWYQNPSAR 316
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 187 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 232
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K P ERP+ E
Sbjct: 233 CPPECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 180 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 225
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K P ERP+ E
Sbjct: 226 CPPECPESLHDLMCQCWRKEPEERPTFE 253
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 356 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYR--------MP 401
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K P ERP+ E
Sbjct: 402 CPPECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 356 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYR--------MP 401
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K P ERP+ E
Sbjct: 402 CPPECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|3ACB|A Chain A, Crystal Structure Of Hypoxanthine-Guanine
Phosphoribosyltransferase From Thermus Thermophilus Hb8
pdb|3ACC|A Chain A, Crystal Structure Of Hypoxanthine-Guanine
Phosphoribosyltransferase With Gmp From Thermus
Thermophilus Hb8
pdb|3ACD|A Chain A, Crystal Structure Of Hypoxanthine-Guanine
Phosphoribosyltransferase With Imp From Thermus
Thermophilus Hb8
Length = 181
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 22 GRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLKTMMEVCVR--CLLK 79
G KS EV+LLK+ + D +VD + + L + L+ VR LL
Sbjct: 74 GNAFKSSGEVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLS 133
Query: 80 NPAERPSVEDVLWNLQFAAQVQDAW 104
P+ R VE + L F +++DA+
Sbjct: 134 KPSRR-QVEVPIHYLGF--EIEDAY 155
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 6 KIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDE 64
K DI+ FG+ +E+ G P + +L LQ + E+ + +K L +
Sbjct: 207 KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ-------DKEMLKK 259
Query: 65 SLKTMMEVCVRCLLKNPAERPSVEDVLWNLQF 96
K+ ++ CL K+P +RP+ ++L + F
Sbjct: 260 YGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 356 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYR--------MP 401
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K P ERP+ E
Sbjct: 402 CPPECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 183 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYRM--------P 228
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K P ERP+ E
Sbjct: 229 CPPECPESLHDLMCQCWRKEPEERPTFE 256
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACL 62
++ + D+Y G +L E++ G P + D + Q R + P+ L
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQ---------HVREDPIPPSARHEGL 246
Query: 63 DESLKTMMEVCVRCLLKNPAER 84
L V ++ L KNP R
Sbjct: 247 SADLDA---VVLKALAKNPENR 265
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 27.3 bits (59), Expect = 2.5, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKA 60
G+ K D++ FG++L E+ K R + N+ V+ E R
Sbjct: 439 GRFTIKSDVWSFGILLTELTT----KGRVPYPGMVNR--EVLDQVERGYR--------MP 484
Query: 61 CLDESLKTMMEVCVRCLLKNPAERPSVE 88
C E +++ ++ +C K P ERP+ E
Sbjct: 485 CPPECPESLHDLMCQCWRKEPEERPTFE 512
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 22/88 (25%)
Query: 8 DIYDFGLILLEIIVGR----PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLD 63
DI+ GL L+E+ VGR P+ + +D + N+ P + A
Sbjct: 188 DIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNE---------------PPPKLPSAVFS 232
Query: 64 ESLKTMMEVCVRCLLKNPAERPSVEDVL 91
+ + +CL+KNPAER ++ ++
Sbjct: 233 LEFQDFVN---KCLIKNPAERADLKQLM 257
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 8 DIYDFGLILLEIIVGRP 24
DIY G++L E++VG P
Sbjct: 194 DIYSIGIVLYEMLVGEP 210
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 26.6 bits (57), Expect = 3.7, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVN- 58
G ++K D++ G+IL ++ G P + E D+LK D R++ D A +
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 59 ---KACLDESLKTMMEVCVR--CLLKNPAERPSVEDV 90
SL+ C+ + K +E P++ D+
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDL 293
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 8 DIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESLK 67
D+Y +G++L E++ G S + N+ Q + R P ++K K
Sbjct: 219 DVYSYGIVLYELMTGELPYSH-----INNRDQIIFMVG----RGYASPDLSK-LYKNCPK 268
Query: 68 TMMEVCVRCLLKNPAERPSVEDVLWNLQF 96
M + C+ K ERP +L +++
Sbjct: 269 AMKRLVADCVKKVKEERPLFPQILSSIEL 297
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Query: 8 DIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACLDESL 66
DI+ GL L+E+ VGR P+ S + L ++ P +
Sbjct: 204 DIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPP--------PKLPSGVFSLEF 255
Query: 67 KTMMEVCVRCLLKNPAERPSVEDVL 91
+ + +CL+KNPAER ++ ++
Sbjct: 256 QDFVN---KCLIKNPAERADLKQLM 277
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACL 62
++ + D+Y G +L E++ G P + V A + R + P+ L
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGD---------SPVSVAYQHVREDPIPPSARHEGL 246
Query: 63 DESLKTMMEVCVRCLLKNPAER 84
L V ++ L KNP R
Sbjct: 247 SADLDA---VVLKALAKNPENR 265
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACL 62
++ + D+Y G +L E++ G P + V A + R + P+ L
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGD---------SPVSVAYQHVREDPIPPSARHEGL 246
Query: 63 DESLKTMMEVCVRCLLKNPAER 84
L V ++ L KNP R
Sbjct: 247 SADLDA---VVLKALAKNPENR 265
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACL 62
++ + D+Y G +L E++ G P + V A + R + P+ L
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGD---------SPVSVAYQHVREDPIPPSARHEGL 246
Query: 63 DESLKTMMEVCVRCLLKNPAER 84
L V ++ L KNP R
Sbjct: 247 SADLDA---VVLKALAKNPENR 265
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACL 62
++ + D+Y G +L E++ G P + V A + R + P+ L
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGD---------SPVSVAYQHVREDPIPPSARHEGL 246
Query: 63 DESLKTMMEVCVRCLLKNPAER 84
L V ++ L KNP R
Sbjct: 247 SADLDA---VVLKALAKNPENR 265
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPA 56
G ++K D++ G+IL ++ G P + E D+LK D R++ D A
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 7 IDIYDFGLILLEIIVGRPL 25
IDI+ G IL E+I G+PL
Sbjct: 190 IDIWSCGCILAEMITGKPL 208
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 25.8 bits (55), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 1 GKLEDKIDIYDFGLILLEIIVGR-PLKSRKEVDLLKNQLQAVITADESARRSMVDPA 56
G ++K D++ G+IL ++ G P + E D+LK D R++ D A
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 3 LEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARRSMVDPAVNKACL 62
++ + D+Y G +L E++ G P + V A + R + P+ L
Sbjct: 213 VDARSDVYSLGCVLYEVLTGEPPFTGD---------SPVSVAYQHVREDPIPPSARHEGL 263
Query: 63 DESLKTMMEVCVRCLLKNPAER 84
L V ++ L KNP R
Sbjct: 264 SADLDA---VVLKALAKNPENR 282
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 25.4 bits (54), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 2 KLEDKIDIYDFGLILLEIIVGRPL 25
K +DI+ G I E+I G+PL
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPL 219
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 19/93 (20%)
Query: 2 KLEDKIDIYDFGLILLEIIVGRPLKSRKEVDLLKNQLQAVITADESARR--SMVDPA-VN 58
K ++ +D+Y FG LE S + A + RR S V PA +
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYPYSECQ------------NAAQIYRRVTSGVKPASFD 252
Query: 59 KACLDESLKTMMEVCVRCLLKNPAERPSVEDVL 91
K + E +K ++E C+R +N ER S++D+L
Sbjct: 253 KVAIPE-VKEIIEGCIR---QNKDERYSIKDLL 281
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 2 KLEDKIDIYDFGLILLEIIVGRPL 25
K +DI+ G I E+I G+PL
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPL 219
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,615,846
Number of Sequences: 62578
Number of extensions: 123009
Number of successful extensions: 754
Number of sequences better than 100.0: 138
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 624
Number of HSP's gapped (non-prelim): 168
length of query: 127
length of database: 14,973,337
effective HSP length: 87
effective length of query: 40
effective length of database: 9,529,051
effective search space: 381162040
effective search space used: 381162040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)