Query 039754
Match_columns 147
No_of_seqs 124 out of 586
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 22:29:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039754.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039754hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pxz_A Major pollen allergen J 100.0 4.4E-50 1.5E-54 343.3 13.0 128 17-145 1-129 (346)
2 3zsc_A Pectate trisaccharide-l 99.9 6.9E-28 2.4E-32 206.6 7.4 91 40-144 13-105 (340)
3 1idk_A Pectin lyase A; signal, 99.9 2.2E-26 7.4E-31 197.9 8.1 96 36-144 2-147 (359)
4 3vmv_A Pectate lyase; polysacc 99.9 1.3E-25 4.3E-30 191.4 7.9 93 39-144 2-117 (326)
5 2qy1_A Pectate lyase II; GAG l 99.9 5.6E-25 1.9E-29 186.7 5.9 90 40-144 1-109 (330)
6 1qcx_A Pectin lyase B; beta-he 99.9 3.3E-24 1.1E-28 184.2 8.9 96 36-144 2-147 (359)
7 1pcl_A Pectate lyase E; lyase 99.9 8.6E-24 2.9E-28 181.5 9.2 94 36-142 3-116 (355)
8 1pe9_A Pectate lyase A; parall 99.9 1.3E-23 4.3E-28 181.1 8.5 91 40-143 13-127 (361)
9 1vbl_A Pectate lyase 47; PL 47 99.9 3.4E-22 1.1E-26 175.0 9.3 92 39-143 9-169 (416)
10 2o04_A Pectate lyase, PL; hexa 99.9 4.8E-22 1.6E-26 173.2 9.3 90 39-142 9-162 (399)
11 1air_A Pectate lyase C, PELC; 99.6 6.8E-16 2.3E-20 132.4 5.8 88 40-142 3-123 (353)
12 1xg2_A Pectinesterase 1; prote 92.5 0.39 1.3E-05 40.2 7.5 66 74-142 17-102 (317)
13 1gq8_A Pectinesterase; hydrola 91.6 0.51 1.7E-05 39.6 7.2 66 74-142 21-106 (319)
14 1ru4_A Pectate lyase, PEL9A; p 90.8 3 0.0001 35.7 11.4 86 52-141 12-126 (400)
15 2nsp_A Pectinesterase A; micha 83.2 3.8 0.00013 34.5 7.5 68 73-143 19-109 (342)
16 1dbg_A Chondroitinase B; beta 76.3 5.8 0.0002 35.2 6.7 66 74-142 33-106 (506)
17 3uw0_A Pectinesterase; right-h 76.1 9.9 0.00034 32.4 7.9 68 73-143 45-135 (364)
18 1nhc_A Polygalacturonase I; be 70.5 9.4 0.00032 31.5 6.3 20 123-142 102-121 (336)
19 2iq7_A Endopolygalacturonase; 68.7 9.5 0.00033 31.5 5.9 20 123-142 102-121 (339)
20 1ia5_A Polygalacturonase; glyc 64.9 13 0.00043 30.8 5.9 20 123-142 106-125 (339)
21 2inu_A Insulin fructotransfera 57.7 11 0.00036 33.1 4.4 26 91-116 63-89 (410)
22 1h80_A IOTA-carrageenase; hydr 55.1 22 0.00076 31.1 6.0 18 124-141 135-152 (464)
23 3grh_A YBHC, acyl-COA thioeste 50.4 31 0.001 30.3 6.1 40 74-115 91-138 (422)
24 1czf_A Polygalacturonase II; b 50.1 31 0.0011 28.8 5.9 20 123-142 128-147 (362)
25 1bhe_A PEHA, polygalacturonase 49.2 16 0.00053 30.4 3.9 20 122-141 152-171 (376)
26 3n6z_A Putative immunoglobulin 41.1 29 0.001 29.5 4.4 111 12-143 2-139 (363)
27 1ogo_X Dextranase; hydrolase, 38.3 50 0.0017 29.7 5.7 14 128-141 331-344 (574)
28 1rmg_A Rgase A, rhamnogalactur 36.0 35 0.0012 29.0 4.2 9 106-114 109-117 (422)
29 3jur_A EXO-poly-alpha-D-galact 35.6 23 0.00078 30.7 3.0 19 123-141 192-210 (448)
30 1ep7_A Thioredoxin CH1, H-type 32.6 25 0.00084 22.4 2.1 28 53-90 1-32 (112)
31 2iq7_A Endopolygalacturonase; 31.7 83 0.0028 25.7 5.6 20 121-140 154-173 (339)
32 1ia5_A Polygalacturonase; glyc 30.6 89 0.003 25.6 5.6 20 121-140 158-177 (339)
33 1ti3_A Thioredoxin H, PTTRXH1; 29.8 27 0.00093 22.1 1.9 30 51-90 1-34 (113)
34 1bhe_A PEHA, polygalacturonase 28.3 86 0.0029 25.9 5.2 59 82-140 149-220 (376)
35 1hg8_A Endopolygalacturonase; 28.3 62 0.0021 26.7 4.3 21 121-141 166-186 (349)
36 1vib_A Neurotoxin B-IV; hydrox 28.0 13 0.00044 23.8 0.1 19 20-38 20-38 (55)
37 3jur_A EXO-poly-alpha-D-galact 27.2 85 0.0029 27.0 5.2 60 82-141 188-258 (448)
38 1rmg_A Rgase A, rhamnogalactur 26.9 1.2E+02 0.0043 25.6 6.1 19 122-140 151-169 (422)
39 1qcx_A Pectin lyase B; beta-he 26.2 1.1E+02 0.0036 25.8 5.5 23 120-142 152-174 (359)
40 1nhc_A Polygalacturonase I; be 24.0 1.3E+02 0.0045 24.5 5.5 20 121-140 153-172 (336)
41 2pyg_A Poly(beta-D-mannuronate 21.0 2.9E+02 0.0098 22.0 6.9 40 74-114 21-70 (377)
42 1ru4_A Pectate lyase, PEL9A; p 20.2 1.1E+02 0.0037 26.0 4.4 22 122-144 130-151 (400)
43 3gqn_A Preneck appendage prote 20.0 36 0.0012 32.1 1.4 22 122-143 135-156 (772)
No 1
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=100.00 E-value=4.4e-50 Score=343.26 Aligned_cols=128 Identities=44% Similarity=0.805 Sum_probs=122.7
Q ss_pred CCCCcccccCCcchhccccCccCCCcccccCCCCCCCCcEEEEcCCCCCCCCCCCCchHHHHHhcCCCeEEEEeeceEEE
Q 039754 17 TNPVDRCWRCWKDWANYRPKLADCVPGFGHKITGGQKGPIYIVTDSSDNDFINSKPGTLCHAVIQNGPLWIIFARDMHIK 96 (147)
Q Consensus 17 ~n~id~cwr~~~~W~~~r~~la~~a~GfG~~ttGGrgG~vy~VT~l~d~d~~~p~~GsLr~Av~~~~P~~IvF~vsG~I~ 96 (147)
+||||+||||+++|+++||+|++||+|||++||||+||++|+||+++| |+++|+|||||+|+++++|+||+|+++|+|+
T Consensus 1 ~~~~~~c~~~~~~w~~~~~~~~~~a~Gfg~~ttGG~gG~v~~VT~~~d-~~~~~~~GsLr~av~~~~P~~Ivf~~~g~I~ 79 (346)
T 1pxz_A 1 DNPIDSCWRGDSNWDQNRMKLADCAVGFGSSTMGGKGGDFYTVTSTDD-NPVNPTPGTLRYGATREKALWIIFSQNMNIK 79 (346)
T ss_dssp CCTTHHHHHSSCCTTTCGGGGGGCCCGGGTTCCTTTTSEEEEECCCCC-CTTSCCTTSHHHHHHCSSCEEEEESSCEEEC
T ss_pred CCccchhhccCcchhhhhhhcccCCccccCCCcCCCCccEEEECChHH-cccccCcchhHHHhccCCCeEEEEcCCcEEe
Confidence 599999999999999999999999999999999999999999999977 6999999999999999999999999999999
Q ss_pred eCceeecCCCceEeccCCeeEEec-CCcEEEeccCcEEEEceEEeeeecC
Q 039754 97 LSQELIMTNDKTIDARGADVHIAY-GAGIMIQHVKNVILHGHSIHYIFPA 145 (147)
Q Consensus 97 L~~~L~v~s~kTI~G~ga~v~I~~-G~Gi~i~~~sNVIIrnL~I~~v~~~ 145 (147)
|+++|.|.|||||+|||++++|.+ |.||+|++++|||||||+|+++.+.
T Consensus 80 l~~~l~V~sn~TI~G~ga~~~i~G~G~gi~i~~a~NVIIrnl~i~~~~~~ 129 (346)
T 1pxz_A 80 LKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTS 129 (346)
T ss_dssp CSSCEECCSSEEEECTTSCEEEETTSCCEEEESCEEEEEESCEEECCCCC
T ss_pred cCccEEecCCeEEEccCCceEEeCCcceEEEEccCCEEEEeeEEEeeccC
Confidence 999999999999999999999994 4899999999999999999998643
No 2
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=99.94 E-value=6.9e-28 Score=206.60 Aligned_cols=91 Identities=24% Similarity=0.368 Sum_probs=85.5
Q ss_pred CCcccccCCCCCCCCcEEEEcCCCCCCCCCCCCchHHHHHhcCCCeEEEEeeceEEEeC--ceeecCCCceEeccCCeeE
Q 039754 40 CVPGFGHKITGGQKGPIYIVTDSSDNDFINSKPGTLCHAVIQNGPLWIIFARDMHIKLS--QELIMTNDKTIDARGADVH 117 (147)
Q Consensus 40 ~a~GfG~~ttGGrgG~vy~VT~l~d~d~~~p~~GsLr~Av~~~~P~~IvF~vsG~I~L~--~~L~v~s~kTI~G~ga~v~ 117 (147)
.|||||++||||+||++|+|||++| ||+|+++++||||+| +|+|+++ .+|+|.|||||+|||++ +
T Consensus 13 ~AeG~g~~ttGG~gG~v~~VTtl~d----------Lr~al~~~~PriIvv--~G~I~~~~~~~l~v~snkTI~G~ga~-~ 79 (340)
T 3zsc_A 13 PTADLPEGTVGGLGGEIVFVRTAEE----------LEKYTTAEGKYVIVV--DGTIVFEPKREIKVLSDKTIVGINDA-K 79 (340)
T ss_dssp CCSSCTTSCCTTTTSEEEEECSHHH----------HHHHHTSSSCEEEEE--EEEEEEEEEEEEEECSSEEEEEEEEE-E
T ss_pred cccccCCCCccCCCceEEEeCCHHH----------HHHHHhCCCCEEEEE--CcEEEeCCcceEEecCCCEEEeccCc-E
Confidence 5788999999999999999999987 999999999999997 7888887 89999999999999998 8
Q ss_pred EecCCcEEEeccCcEEEEceEEeeeec
Q 039754 118 IAYGAGIMIQHVKNVILHGHSIHYIFP 144 (147)
Q Consensus 118 I~~G~Gi~i~~~sNVIIrnL~I~~v~~ 144 (147)
|. |.||+|++++|||||||+||++.+
T Consensus 80 I~-G~Gi~I~~a~NVIIrnl~i~~~~~ 105 (340)
T 3zsc_A 80 IV-GGGLVIKDAQNVIIRNIHFEGFYM 105 (340)
T ss_dssp EE-EEEEEEESCEEEEEESCEEECCCC
T ss_pred Ee-cCceEEEcCceEEEeCeEEECCcc
Confidence 98 999999999999999999999863
No 3
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=99.93 E-value=2.2e-26 Score=197.93 Aligned_cols=96 Identities=19% Similarity=0.336 Sum_probs=89.9
Q ss_pred CccCCCcccccCCCCCCCCcEEEEcCCCCCCCCCCCCchHHHHHhcCCCeEEEEeeceEEEeC-----------------
Q 039754 36 KLADCVPGFGHKITGGQKGPIYIVTDSSDNDFINSKPGTLCHAVIQNGPLWIIFARDMHIKLS----------------- 98 (147)
Q Consensus 36 ~la~~a~GfG~~ttGGrgG~vy~VT~l~d~d~~~p~~GsLr~Av~~~~P~~IvF~vsG~I~L~----------------- 98 (147)
.++++|+|||++||||++|++|+||+++| ||+|+++++|+||+| +|+|+++
T Consensus 2 ~~~~~a~Gfa~~tTGG~~g~~~~Vtt~~d----------L~~al~~~~prvIvv--~gti~~~~~~G~~t~~~c~~~~~~ 69 (359)
T 1idk_A 2 GVSGSAEGFAKGVTGGGSATPVYPDTIDE----------LVSYLGDDEARVIVL--TKTFDFTDSEGTTTGTGCAPWGTA 69 (359)
T ss_dssp CCCSCCCGGGTTCCTTTTCCCBCCCSHHH----------HHHHHHSSSCEEEEE--CSEEECTTTTCEEEEEEECTTCSS
T ss_pred CCCCCCccccCCCCCCCCceEEecCCHHH----------HHHHHcCCCceEEEE--CCEEEeccccCccccccccccccc
Confidence 57889999999999999999999999987 999999999999998 8999974
Q ss_pred --------------------------------ceeecCCCceEeccCCeeEEecCCcEEEe-ccCcEEEEceEEeeeec
Q 039754 99 --------------------------------QELIMTNDKTIDARGADVHIAYGAGIMIQ-HVKNVILHGHSIHYIFP 144 (147)
Q Consensus 99 --------------------------------~~L~v~s~kTI~G~ga~v~I~~G~Gi~i~-~~sNVIIrnL~I~~v~~ 144 (147)
.+|+|.|||||+|+|++++|. |.||+|+ +++|||||||+||++++
T Consensus 70 ~~~~~~~~~~~w~~~~~~~~~~~~~t~~~~~~~~l~v~snkTI~G~G~~~~i~-G~gl~i~~~a~NVIIrnL~i~~~~~ 147 (359)
T 1idk_A 70 SACQVAIDQDDWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIK-GKGLRIVSGAENIIIQNIAVTDINP 147 (359)
T ss_dssp TTBCEEECGGGHHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEE-SCCEEECTTCEEEEEESCEEEEECT
T ss_pred cccccccccccccccccccCccccccccccccceEEeCCCceEEEecCCeEEe-cceEEEecCCCcEEEeCeEEEcccc
Confidence 358999999999999999999 9999998 89999999999999875
No 4
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=99.92 E-value=1.3e-25 Score=191.43 Aligned_cols=93 Identities=20% Similarity=0.333 Sum_probs=87.0
Q ss_pred CCCccccc---CCCCCCCCcEEEEcCCCCCCCCCCCCchHHHHHh-------cCCCeEEEEeeceEEEeC----ceeecC
Q 039754 39 DCVPGFGH---KITGGQKGPIYIVTDSSDNDFINSKPGTLCHAVI-------QNGPLWIIFARDMHIKLS----QELIMT 104 (147)
Q Consensus 39 ~~a~GfG~---~ttGGrgG~vy~VT~l~d~d~~~p~~GsLr~Av~-------~~~P~~IvF~vsG~I~L~----~~L~v~ 104 (147)
++|+|||+ +||||+||++|+|||++| ||+|++ +++|++|+ |+|+|+|+ ++|.|+
T Consensus 2 ~~~~Gfa~~nggTtGG~gG~vv~Vttl~d----------L~~Al~~~~~~~~~~~p~iI~--V~G~I~l~~~~~~~i~v~ 69 (326)
T 3vmv_A 2 NGPQGYASMNGGTTGGAGGRVEYASTGAQ----------IQQLIDNRSRSNNPDEPLTIY--VNGTITQGNSPQSLIDVK 69 (326)
T ss_dssp -CCSGGGGSTTCCCTTTTSEEEEESSHHH----------HHHHHHHHHHSSCTTSCEEEE--ECSEEESTTCSSSSEEES
T ss_pred CCCceeeecCCCCccCCCCeEEEECCHHH----------HHHHHhhcccccCCCCCEEEE--EeeEEecCCCCCceEEEe
Confidence 47899999 699999999999999988 999999 89999998 79999999 889998
Q ss_pred ---------CCceEeccCCeeEEecCCcEEEeccCcEEEEceEEeeeec
Q 039754 105 ---------NDKTIDARGADVHIAYGAGIMIQHVKNVILHGHSIHYIFP 144 (147)
Q Consensus 105 ---------s~kTI~G~ga~v~I~~G~Gi~i~~~sNVIIrnL~I~~v~~ 144 (147)
|||||+|+|++++|. |.||+|++++|||||||+|+++..
T Consensus 70 ~~~~~~~~~sn~TI~G~g~~~~i~-G~gl~i~~a~NVIIrNl~i~~~~~ 117 (326)
T 3vmv_A 70 NHRGKAHEIKNISIIGVGTNGEFD-GIGIRLSNAHNIIIQNVSIHHVRE 117 (326)
T ss_dssp CTTCTTSCEEEEEEEECTTCCEEE-SCCEEEESEEEEEEESCEEECCCS
T ss_pred cccccccCCCCeEEEecCCCeEEe-CcEEEEEecceEEEECeEEEcCCC
Confidence 999999999999999 999999999999999999998763
No 5
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=99.91 E-value=5.6e-25 Score=186.67 Aligned_cols=90 Identities=21% Similarity=0.275 Sum_probs=82.7
Q ss_pred CCcccccCCCCCCCCcEEEEcCCCCCCCCCCCCchHHHHHhc---CCCeEEEEeeceEEEeCc---------------ee
Q 039754 40 CVPGFGHKITGGQKGPIYIVTDSSDNDFINSKPGTLCHAVIQ---NGPLWIIFARDMHIKLSQ---------------EL 101 (147)
Q Consensus 40 ~a~GfG~~ttGGrgG~vy~VT~l~d~d~~~p~~GsLr~Av~~---~~P~~IvF~vsG~I~L~~---------------~L 101 (147)
+|+|||++||||++|++|+|||+++ |++|+++ ++|+||+| +|+|+++. +|
T Consensus 1 ga~Gfa~~ttGG~gg~~~~Vtt~~~----------L~~al~~~~~~~p~iI~~--~G~i~~~~~~~~c~~~~~~~~~~~l 68 (330)
T 2qy1_A 1 GPVGYGAGTTGGGNKVPVNVATFEA----------MQSAIDSYSGSGGLVLNY--TGKFDFGTIKDVCAQWKLPAKTVQI 68 (330)
T ss_dssp CCCSTTTTCCTTTTSCCEEECSHHH----------HHHHHHHSCSSSCEEEEE--CCBCCGGGCCCGGGSTTSCCCEEEE
T ss_pred CCceeecCCCCCCCceEEEcCCHHH----------HHHHHhccCCCCCEEEEE--ccEEecccccccccccccccceeEE
Confidence 5899999999999999999999976 9999985 89999998 89999985 89
Q ss_pred ecCCCceEeccCCeeEEecCCcEEEe-ccCcEEEEceEEeeeec
Q 039754 102 IMTNDKTIDARGADVHIAYGAGIMIQ-HVKNVILHGHSIHYIFP 144 (147)
Q Consensus 102 ~v~s~kTI~G~ga~v~I~~G~Gi~i~-~~sNVIIrnL~I~~v~~ 144 (147)
++.|||||+|+++ +|. |.||+|+ +++|||||||+|+++.+
T Consensus 69 ~v~sn~TI~G~~a--~i~-g~gl~i~~~~~NVIIrnl~i~~~~~ 109 (330)
T 2qy1_A 69 KNKSDVTIKGANG--SAA-NFGIRVVGNAHNVIIQNMTIGLLQG 109 (330)
T ss_dssp ESCCSEEEEECTT--CBB-SSEEEEESSCEEEEEESCEEESCSS
T ss_pred EcCCCeEEECCCc--EEe-eeeEEEeCCCCeEEEeCeEEeCCCC
Confidence 9999999988775 677 9999999 99999999999998875
No 6
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=99.90 E-value=3.3e-24 Score=184.22 Aligned_cols=96 Identities=26% Similarity=0.429 Sum_probs=86.4
Q ss_pred CccCCCcccccCCCCCCCCcEEEEcCCCCCCCCCCCCchHHHHHhcCCCeEEEEeeceEEEeC-----------------
Q 039754 36 KLADCVPGFGHKITGGQKGPIYIVTDSSDNDFINSKPGTLCHAVIQNGPLWIIFARDMHIKLS----------------- 98 (147)
Q Consensus 36 ~la~~a~GfG~~ttGGrgG~vy~VT~l~d~d~~~p~~GsLr~Av~~~~P~~IvF~vsG~I~L~----------------- 98 (147)
++.+.|||||++||||++|++|+|||++| |++|+++++|++|+| +|+|++.
T Consensus 2 ~~~~~a~Gfa~~tTGG~gg~~v~Vtt~~~----------L~~al~~~~prvIvv--~gtid~~g~~g~~~~~~c~~~~~~ 69 (359)
T 1qcx_A 2 GVVGAAEGFAHGVTGGGSASPVYPTTTDE----------LVSYLGDNEPRVIIL--DQTFDFTGTEGTETTTGCAPWGTA 69 (359)
T ss_dssp CCCSCCCGGGTTCCTTTTCCCBCCCSHHH----------HHHHHHSSSCEEEEE--CSEEECTTTTCEEEEEEECTTCSS
T ss_pred CcCCCcceeecCCcCCCCcceEEeCCHHH----------HHHHHcCCCCeEEEE--CcEEeecccccccccccccccccc
Confidence 46678999999999999999999999987 999999999999994 5555531
Q ss_pred --------------------------------ceeecCCCceEeccCCeeEEecCCcEEEe-ccCcEEEEceEEeeeec
Q 039754 99 --------------------------------QELIMTNDKTIDARGADVHIAYGAGIMIQ-HVKNVILHGHSIHYIFP 144 (147)
Q Consensus 99 --------------------------------~~L~v~s~kTI~G~ga~v~I~~G~Gi~i~-~~sNVIIrnL~I~~v~~ 144 (147)
.+|+|.|||||+|+|++++|. |.||+|+ +++|||||||+||++.+
T Consensus 70 ~~~~~~i~~~~~~~~~~~~~p~~ti~~~~a~~~~i~v~snkTI~G~g~~~~I~-G~gl~i~~~a~NVIIrnl~i~~~~~ 147 (359)
T 1qcx_A 70 SQCQVAINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIK-GKGLRVVSGAKNVIIQNIAVTDINP 147 (359)
T ss_dssp TTBCEEECGGGHHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEE-SCCEEEETTCCCEEEESCEEEEECT
T ss_pred ccccceecccccccccccCCccceeeecccccceEEeCCCceEEecCCceEEe-cceEEEecCCCCEEEeCcEEEecCC
Confidence 368899999999999999999 9999999 99999999999999875
No 7
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=99.89 E-value=8.6e-24 Score=181.53 Aligned_cols=94 Identities=24% Similarity=0.317 Sum_probs=84.9
Q ss_pred CccCCCccccc---CCCCCCCCc-EEEEcCCCCCCCCCCCCchHHHHH--hcCCCeEEEEeeceEEEeCc----------
Q 039754 36 KLADCVPGFGH---KITGGQKGP-IYIVTDSSDNDFINSKPGTLCHAV--IQNGPLWIIFARDMHIKLSQ---------- 99 (147)
Q Consensus 36 ~la~~a~GfG~---~ttGGrgG~-vy~VT~l~d~d~~~p~~GsLr~Av--~~~~P~~IvF~vsG~I~L~~---------- 99 (147)
..+.+++|||+ +||||++|+ +|+|||++| |++|+ +.++|++| .|+|+|++..
T Consensus 3 ~~~~~~~G~a~~~~gtTGG~~g~~v~~Vtt~~~----------L~~al~~~~~~p~VI--~V~GtI~~~~~~~~~s~~~~ 70 (355)
T 1pcl_A 3 ETDAATTGWATQNGGTTGGAKAAKAVEVKNISD----------FKKALNGTDSSAKII--KVTGPIDISGGKAYTSFDDQ 70 (355)
T ss_pred ccccCCcceeecCCCCccCCCCceEEEeCCHHH----------HHHHHhhCCCCcEEE--EECCEEecCCcccccccccc
Confidence 34458999998 899999997 799999988 99999 67899955 5799999974
Q ss_pred ----eeecCCCceEeccCCeeEEecCCcEEEeccCcEEEEceEEeee
Q 039754 100 ----ELIMTNDKTIDARGADVHIAYGAGIMIQHVKNVILHGHSIHYI 142 (147)
Q Consensus 100 ----~L~v~s~kTI~G~ga~v~I~~G~Gi~i~~~sNVIIrnL~I~~v 142 (147)
+|+|.|||||+|+|.+++|. |.||+|++++|||||||+|++.
T Consensus 71 ~~~~~l~v~sn~TI~G~G~~~~i~-g~gl~i~~~~NVIIrnl~i~~~ 116 (355)
T 1pcl_A 71 KARSQISIPSNTTIIGVGSNGKFT-NGSLVIKGVKNVILRNLYIETP 116 (355)
T ss_pred ccceeEEeCCCeEEEEecCCeEEe-cCEEEEecCCeEEEeeeEEEcC
Confidence 78999999999999999999 9999999999999999999975
No 8
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=99.89 E-value=1.3e-23 Score=181.08 Aligned_cols=91 Identities=24% Similarity=0.332 Sum_probs=83.7
Q ss_pred CCccccc---CCCCCCCC---cEEEEcCCCCCCCCCCCCchHHHHH-hcCCCeEEEEeeceEEEeCc-------------
Q 039754 40 CVPGFGH---KITGGQKG---PIYIVTDSSDNDFINSKPGTLCHAV-IQNGPLWIIFARDMHIKLSQ------------- 99 (147)
Q Consensus 40 ~a~GfG~---~ttGGrgG---~vy~VT~l~d~d~~~p~~GsLr~Av-~~~~P~~IvF~vsG~I~L~~------------- 99 (147)
+++|||+ +||||++| +||+|||++| |++|+ ++++|++|+ |+|+|++..
T Consensus 13 ~~~Gfa~~~~gtTGG~~g~~~~v~~Vtt~~d----------L~~al~~~~~p~vI~--V~GtI~~~~~~~~~s~~~~~~~ 80 (361)
T 1pe9_A 13 PTVGWASQNGFTTGGAAATSDNIYIVTNISE----------FTSALSAGAEAKIIQ--IKGTIDISGGTPYTDFADQKAR 80 (361)
T ss_dssp CSSSGGGSSSCCCTTTTCCGGGEEEECSHHH----------HHHHHTTTTSCEEEE--ECSEEETTTTCCCCSHHHHHHH
T ss_pred CCCceeecCCCCcCCCCCccccEEEeCCHHH----------HHHHHhcCCCcEEEE--ECCEEecCCccccccccccccc
Confidence 4899995 99999998 7999999988 99999 899999875 699999974
Q ss_pred -eeecCCCceEeccCCeeEEecCCcEEE---eccCcEEEEceEEeeee
Q 039754 100 -ELIMTNDKTIDARGADVHIAYGAGIMI---QHVKNVILHGHSIHYIF 143 (147)
Q Consensus 100 -~L~v~s~kTI~G~ga~v~I~~G~Gi~i---~~~sNVIIrnL~I~~v~ 143 (147)
+|+|.|||||+|+|.+++|. |.||+| ++++|||||||+|+++.
T Consensus 81 ~~l~v~snkTI~G~G~~~~i~-g~gl~i~~~~~~~NVIIrNl~i~~~~ 127 (361)
T 1pe9_A 81 SQINIPANTTVIGLGTDAKFI-NGSLIIDGTDGTNNVIIRNVYIQTPI 127 (361)
T ss_dssp SEEECCSSEEEEECTTCCEEE-SSEEEEEGGGTCEEEEEESCEEECCC
T ss_pred eeEEecCCcEEEccCCCeEEe-cCEEEEecCCCCceEEEeCeEEEcCc
Confidence 79999999999999999999 999999 79999999999999753
No 9
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=99.86 E-value=3.4e-22 Score=175.02 Aligned_cols=92 Identities=26% Similarity=0.411 Sum_probs=83.5
Q ss_pred CCCccccc---CCCCCCCCc---EEEEcCCCCCCCCCCCCchHHHHHhcC--------CCeEEEEeeceEEEeCc-----
Q 039754 39 DCVPGFGH---KITGGQKGP---IYIVTDSSDNDFINSKPGTLCHAVIQN--------GPLWIIFARDMHIKLSQ----- 99 (147)
Q Consensus 39 ~~a~GfG~---~ttGGrgG~---vy~VT~l~d~d~~~p~~GsLr~Av~~~--------~P~~IvF~vsG~I~L~~----- 99 (147)
..|+|||+ +||||++|. ||+|||++| |++|++++ +|++|+ |+|+|++..
T Consensus 9 ~~~~GfA~~~~gTTGG~~a~~~~v~tVtt~ae----------L~~al~~~~~~~~~~~~priI~--V~GtId~~~~~~g~ 76 (416)
T 1vbl_A 9 KPYDGWAAYGEGTTGGAMASPQNVFVVTNRTE----------LIQALGGNNHTNQYNSVPKIIY--VKGTIDLNVDDNNQ 76 (416)
T ss_dssp CTTSSGGGSTTCCCTTTTCCGGGEEEECSHHH----------HHHHTTSCTTGGGGCCSCEEEE--ECSEEESSBCTTSC
T ss_pred CCCcceeecCCCCcCCCCCccccEEEeCCHHH----------HHHHHhccccccccCCCCEEEE--ECCEEecccCCCCc
Confidence 47999999 999999995 999999987 99999864 899998 699999852
Q ss_pred --------------------------------------------------eeecCCCceEeccCCeeEEecCCcEEEecc
Q 039754 100 --------------------------------------------------ELIMTNDKTIDARGADVHIAYGAGIMIQHV 129 (147)
Q Consensus 100 --------------------------------------------------~L~v~s~kTI~G~ga~v~I~~G~Gi~i~~~ 129 (147)
+|.|.|||||+|+|++++|. |.||+|+++
T Consensus 77 ~~~c~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~-g~gl~i~~~ 155 (416)
T 1vbl_A 77 PVGPDFYKDPHFDFEAYLREYDPATWGKKEVEGPLEEARVRSQKKQKDRIMVYVGSNTSIIGVGKDAKIK-GGGFLIKNV 155 (416)
T ss_dssp BCCHHHHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEECTTCCEEE-SCEEEEESC
T ss_pred cccccccccCCcchhhhhhhhCccccccccCCCCcccccccccccccceeEEEeCCCeeEEecCCCeEEe-cCEEEeecC
Confidence 67889999999999999999 999999999
Q ss_pred CcEEEEceEEeeee
Q 039754 130 KNVILHGHSIHYIF 143 (147)
Q Consensus 130 sNVIIrnL~I~~v~ 143 (147)
+|||||||+|++..
T Consensus 156 ~NVIIrNl~i~~~~ 169 (416)
T 1vbl_A 156 DNVIIRNIEFEAPL 169 (416)
T ss_dssp EEEEEESCEEECCC
T ss_pred ceEEEeCeEEEcCc
Confidence 99999999998753
No 10
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=99.86 E-value=4.8e-22 Score=173.17 Aligned_cols=90 Identities=23% Similarity=0.404 Sum_probs=82.7
Q ss_pred CCCccccc---CCCCCCCCc---EEEEcCCCCCCCCCCCCchHHHHH---hcCCCeEEEEeeceEEEeCc----------
Q 039754 39 DCVPGFGH---KITGGQKGP---IYIVTDSSDNDFINSKPGTLCHAV---IQNGPLWIIFARDMHIKLSQ---------- 99 (147)
Q Consensus 39 ~~a~GfG~---~ttGGrgG~---vy~VT~l~d~d~~~p~~GsLr~Av---~~~~P~~IvF~vsG~I~L~~---------- 99 (147)
..|+|||+ +||||++|. ||+|||++| |++|+ +.++|++|+ ++|+|++..
T Consensus 9 ~~a~Gfa~~~~gTTGG~~a~~~~v~tVtt~ae----------L~~al~~~~~~~priI~--v~GtId~~~~~~g~~~~c~ 76 (399)
T 2o04_A 9 GSNDGWGAYSTGTTGGSKASSSNVYTVSNRNQ----------LVSALGKETNTTPKIIY--IKGTIDMNVDDNLKPLGLN 76 (399)
T ss_dssp CTTSSGGGSTTCCCTTTTCCGGGEEEECSHHH----------HHHHHCCTTCCSCEEEE--ECSEEESSBCTTCCBCCHH
T ss_pred CCCcceeecCCCCcCCCCCccceEEEeCCHHH----------HHHHHHhccCCCCEEEE--EcCEEecccCCcccccccc
Confidence 47999999 999999996 999999987 99999 789999998 599999851
Q ss_pred ---------------------------------------------eeecCCCceEeccCCeeEEecCCcEEEeccCcEEE
Q 039754 100 ---------------------------------------------ELIMTNDKTIDARGADVHIAYGAGIMIQHVKNVIL 134 (147)
Q Consensus 100 ---------------------------------------------~L~v~s~kTI~G~ga~v~I~~G~Gi~i~~~sNVII 134 (147)
+|+|.|||||+|+|++++|. |.||+|+. +||||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~-g~gl~i~~-~NVII 154 (399)
T 2o04_A 77 DYKDPEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVV-GGNFQIKS-DNVII 154 (399)
T ss_dssp HHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEESSSCCEEE-SCEEEECS-EEEEE
T ss_pred ccccCCcchhhhhhcccccccccccCCCcccccccccccccccceEEEeCCCceEEeccCCeEEe-eCEEEeeC-CCEEE
Confidence 67889999999999999999 99999999 99999
Q ss_pred EceEEeee
Q 039754 135 HGHSIHYI 142 (147)
Q Consensus 135 rnL~I~~v 142 (147)
|||+|++.
T Consensus 155 rnl~i~~~ 162 (399)
T 2o04_A 155 RNIEFQDA 162 (399)
T ss_dssp ESCEEECC
T ss_pred eCeEEecC
Confidence 99999875
No 11
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=99.59 E-value=6.8e-16 Score=132.43 Aligned_cols=88 Identities=17% Similarity=0.221 Sum_probs=69.6
Q ss_pred CCccccc---CCCCCCCCcEEEEcCCCCCCCCCCCCchHHHHHhc-----------CCCeEEEEeeceEEEe--------
Q 039754 40 CVPGFGH---KITGGQKGPIYIVTDSSDNDFINSKPGTLCHAVIQ-----------NGPLWIIFARDMHIKL-------- 97 (147)
Q Consensus 40 ~a~GfG~---~ttGGrgG~vy~VT~l~d~d~~~p~~GsLr~Av~~-----------~~P~~IvF~vsG~I~L-------- 97 (147)
..+||+. +|+|| ..+|+||++++ |++|+++ ++++.+||.|+|+|+|
T Consensus 3 ~~~G~at~~Ggt~gg--~~~~tvtt~~~----------L~~al~~~~~~~~g~~~~~~~~p~vi~v~GtId~~~~~~~~~ 70 (353)
T 1air_A 3 DTGGYAATAGGNVTG--AVSKTATSMQD----------IVNIIDAARLDANGKKVKGGAYPLVITYTGNEDSLINAAAAN 70 (353)
T ss_dssp BCSSSCBCCTTCSTT--CEEEEESSHHH----------HHHHHHHTTBCTTSCBCTBCSSCEEEEECCCCHHHHHHHHTS
T ss_pred CCCcceecCCCCCCC--cceEEeCCHHH----------HHHHHHhhccccccccccCCCceEEEEEccEEeccccccccc
Confidence 4689987 44444 36799999976 9999965 3455556778999998
Q ss_pred --------Cceeec---CCCceEeccCCeeEEecCCcEEEeccCcEEEEceEEeee
Q 039754 98 --------SQELIM---TNDKTIDARGADVHIAYGAGIMIQHVKNVILHGHSIHYI 142 (147)
Q Consensus 98 --------~~~L~v---~s~kTI~G~ga~v~I~~G~Gi~i~~~sNVIIrnL~I~~v 142 (147)
+++|.| .|||||+|+++. +. |.||.|++++|||||||+|+++
T Consensus 71 ~~~~~~~~~~~~~i~~~~sn~TI~G~~~~--~~-g~gl~i~~~~NVIIrnl~i~~~ 123 (353)
T 1air_A 71 ICGQWSKDPRGVEIKEFTKGITIIGANGS--SA-NFGIWIKKSSDVVVQNMRIGYL 123 (353)
T ss_dssp GGGSTTSCCCEEEEESBCSCEEEEECTTC--CB-SSEEEEESCCSEEEESCEEESC
T ss_pred cccccccCCCceEEEecCCCEEEEeccCC--CC-CceEEEeccCcEEEeccEEEeC
Confidence 356766 589999999763 55 8899999999999999999975
No 12
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=92.46 E-value=0.39 Score=40.22 Aligned_cols=66 Identities=20% Similarity=0.234 Sum_probs=45.7
Q ss_pred hHHHHHhc----CCCeEEEEeeceEEEeCceeecC---CCceEeccCC-eeEEecC------------CcEEEeccCcEE
Q 039754 74 TLCHAVIQ----NGPLWIIFARDMHIKLSQELIMT---NDKTIDARGA-DVHIAYG------------AGIMIQHVKNVI 133 (147)
Q Consensus 74 sLr~Av~~----~~P~~IvF~vsG~I~L~~~L~v~---s~kTI~G~ga-~v~I~~G------------~Gi~i~~~sNVI 133 (147)
|+.+||.+ +..+++|+=..|+-+ +.|.|. +|+||.|.+. ...|... .-|.+ .++|++
T Consensus 17 TIq~AI~aap~~~~~~~~I~I~~G~Y~--E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~~f~ 93 (317)
T 1xg2_A 17 TLAEAVAAAPDKSKTRYVIYVKRGTYK--ENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAA-VGQGFI 93 (317)
T ss_dssp SHHHHHHHSCSSCSSCEEEEECSEEEE--CCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCCSGGGCSEEE-CSTTCE
T ss_pred cHHHHHhhcccCCCceEEEEEcCCEEe--eeeecCCCCCcEEEEEcCCCCcEEEecccccCCCcccceeEEEE-ECCCEE
Confidence 78999865 122444444678765 556663 6899999985 4556521 23566 799999
Q ss_pred EEceEEeee
Q 039754 134 LHGHSIHYI 142 (147)
Q Consensus 134 IrnL~I~~v 142 (147)
++||.|++-
T Consensus 94 ~~~lt~~Nt 102 (317)
T 1xg2_A 94 LQDICIQNT 102 (317)
T ss_dssp EESCEEEEC
T ss_pred EEEeEEecc
Confidence 999999985
No 13
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=91.59 E-value=0.51 Score=39.59 Aligned_cols=66 Identities=11% Similarity=0.096 Sum_probs=45.4
Q ss_pred hHHHHHhcC----CCeEEEEeeceEEEeCceeecC---CCceEeccCC-eeEEecC------------CcEEEeccCcEE
Q 039754 74 TLCHAVIQN----GPLWIIFARDMHIKLSQELIMT---NDKTIDARGA-DVHIAYG------------AGIMIQHVKNVI 133 (147)
Q Consensus 74 sLr~Av~~~----~P~~IvF~vsG~I~L~~~L~v~---s~kTI~G~ga-~v~I~~G------------~Gi~i~~~sNVI 133 (147)
|+.+||.+- ..+++|+=..|+-+ +.|.|. +|+||.|.+. ...|... .-|.+ .++|++
T Consensus 21 TIq~AI~aap~~~~~~~~I~I~~G~Y~--E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~~f~ 97 (319)
T 1gq8_A 21 TVSEAVAAAPEDSKTRYVIRIKAGVYR--ENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAA-VGAGFL 97 (319)
T ss_dssp SHHHHHHHSCSSCSSCEEEEECSEEEE--CCEEECTTCCSEEEEESCTTTEEEEECCCTTTTCCTGGGCSEEE-CSTTCE
T ss_pred CHHHHHHhccccCCceEEEEEcCCeEe--eeeeccCCCccEEEEEcCCCccEEEecccccCCCCccceEEEEE-ECCCEE
Confidence 789998751 22444444678765 556664 6899999985 4556521 23555 699999
Q ss_pred EEceEEeee
Q 039754 134 LHGHSIHYI 142 (147)
Q Consensus 134 IrnL~I~~v 142 (147)
++||.|++-
T Consensus 98 ~~nlt~~Nt 106 (319)
T 1gq8_A 98 ARDITFQNT 106 (319)
T ss_dssp EEEEEEEEC
T ss_pred EEEeEeEcc
Confidence 999999984
No 14
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=90.77 E-value=3 Score=35.73 Aligned_cols=86 Identities=13% Similarity=0.230 Sum_probs=47.7
Q ss_pred CCCcEEEEcCCCCCCCCCCC-----CchHHHHHhcCCC-eEEEEeeceEEE--eC----ceeecC-CC-----ceEeccC
Q 039754 52 QKGPIYIVTDSSDNDFINSK-----PGTLCHAVIQNGP-LWIIFARDMHIK--LS----QELIMT-ND-----KTIDARG 113 (147)
Q Consensus 52 rgG~vy~VT~l~d~d~~~p~-----~GsLr~Av~~~~P-~~IvF~vsG~I~--L~----~~L~v~-s~-----kTI~G~g 113 (147)
....+|+|....+ | .+++ |-||..|+.+-.| -+|++ ..|+.+ +. ..|.+. |. +||.|.+
T Consensus 12 ~~~~~~yVsp~Gs-d-~~~G~t~~~P~tiq~Ai~~a~pGdtI~l-~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~~~~ 88 (400)
T 1ru4_A 12 STKRIYYVAPNGN-S-SNNGSSFNAPMSFSAAMAAVNPGELILL-KPGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAAN 88 (400)
T ss_dssp CCSCEEEECTTCC-T-TCCSSSTTSCBCHHHHHHHCCTTCEEEE-CSEEEECCCBTTBCCCEEECCCCBTTBCEEEEEGG
T ss_pred cCccEEEEcCCCC-C-CCCCccccCCccHHHHHhhCCCCCEEEE-CCCeEccccccccceeEEecCCCCCCCCEEEEEec
Confidence 3446788854322 2 1223 4499999987444 34444 478877 43 234442 33 6777654
Q ss_pred -CeeEEec----C------CcEEEeccCcEEEEceEEee
Q 039754 114 -ADVHIAY----G------AGIMIQHVKNVILHGHSIHY 141 (147)
Q Consensus 114 -a~v~I~~----G------~Gi~i~~~sNVIIrnL~I~~ 141 (147)
..+.|.. + .+|.| .++++.|++|+|++
T Consensus 89 g~~~vI~~~~~~g~~~~~~~~i~i-~~~~~~i~gl~I~n 126 (400)
T 1ru4_A 89 CGRAVFDFSFPDSQWVQASYGFYV-TGDYWYFKGVEVTR 126 (400)
T ss_dssp GCCEEEECCCCTTCCCTTCCSEEE-CSSCEEEESEEEES
T ss_pred CCCCEEeCCccCCccccceeEEEE-ECCeEEEEeEEEEe
Confidence 2344431 1 45666 66777777777754
No 15
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=83.20 E-value=3.8 Score=34.48 Aligned_cols=68 Identities=19% Similarity=0.284 Sum_probs=46.0
Q ss_pred chHHHHHhcC---CCeEEEEeeceEEEeCceeecC-CCceEeccCC-eeEEecC------------------CcEEEecc
Q 039754 73 GTLCHAVIQN---GPLWIIFARDMHIKLSQELIMT-NDKTIDARGA-DVHIAYG------------------AGIMIQHV 129 (147)
Q Consensus 73 GsLr~Av~~~---~P~~IvF~vsG~I~L~~~L~v~-s~kTI~G~ga-~v~I~~G------------------~Gi~i~~~ 129 (147)
-|+.+||..- ..+++|+=..|+-+ +.|.|. +++||.|.+. ...|... .-|.+ .+
T Consensus 19 ~TIq~Ai~aap~~~~~~~I~I~~G~Y~--E~V~I~k~~Itl~G~g~~~tiI~~~~~~~~~~~~g~~~gT~~satv~v-~a 95 (342)
T 2nsp_A 19 KTIADAIASAPAGSTPFVILIKNGVYN--ERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITI-SA 95 (342)
T ss_dssp SSHHHHHHTSCSSSSCEEEEECSEEEE--CCEEECSTTEEEEESCTTTEEEEECCCTTCBCTTSCBCHHHHTCSEEE-CS
T ss_pred chHHHHHHhcccCCCcEEEEEeCCEEE--EEEEEecCeEEEEecCCCCeEEEecccccccccccCcccccceeEEEE-EC
Confidence 4788998651 12345554678765 456664 6899999985 4555411 23455 68
Q ss_pred CcEEEEceEEeeee
Q 039754 130 KNVILHGHSIHYIF 143 (147)
Q Consensus 130 sNVIIrnL~I~~v~ 143 (147)
+|++++||.|++--
T Consensus 96 ~~f~a~nlt~~Nt~ 109 (342)
T 2nsp_A 96 KDFSAQSLTIRNDF 109 (342)
T ss_dssp BSCEEEEEEEEECC
T ss_pred CCEEEEeeEEEccc
Confidence 99999999999864
No 16
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=76.29 E-value=5.8 Score=35.22 Aligned_cols=66 Identities=24% Similarity=0.174 Sum_probs=41.0
Q ss_pred hHHHHHhcCCC-eEEEEeeceEEEeCceeec------CCCceEeccC-CeeEEecCCcEEEeccCcEEEEceEEeee
Q 039754 74 TLCHAVIQNGP-LWIIFARDMHIKLSQELIM------TNDKTIDARG-ADVHIAYGAGIMIQHVKNVILHGHSIHYI 142 (147)
Q Consensus 74 sLr~Av~~~~P-~~IvF~vsG~I~L~~~L~v------~s~kTI~G~g-a~v~I~~G~Gi~i~~~sNVIIrnL~I~~v 142 (147)
+|..|+.+-.| -+|++ ..|+-+-. .|.+ ...+||.|.+ ..+.|.++..|.| .+++|.|++|+|++.
T Consensus 33 ~Lq~Ai~~A~pGDtI~L-~~GtY~~~-~i~i~~sGt~~~pItl~~~~~~~~vi~G~~~l~i-~g~~v~i~GL~i~~~ 106 (506)
T 1dbg_A 33 TLYQVVKEVKPGGLVQI-ADGTYKDV-QLIVSNSGKSGLPITIKALNPGKVFFTGDAKVEL-RGEHLILEGIWFKDG 106 (506)
T ss_dssp HHHHHHHHCCTTCEEEE-CSEEEETC-EEEECCCCBTTBCEEEEESSTTSEEEEESCEEEE-CSSSEEEESCEEEEE
T ss_pred HHHHHHHhCCCCCEEEE-CCCEEecc-eEEEecCCcCCCCEEEECCCCCccEEeCCceEEE-EcCCEEEECeEEECC
Confidence 59999976444 34443 46776532 4554 3456888764 2466663344666 468888888888765
No 17
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=76.11 E-value=9.9 Score=32.38 Aligned_cols=68 Identities=15% Similarity=0.235 Sum_probs=44.0
Q ss_pred chHHHHHhcCC---CeEEEEeeceEEEeCceeecC-CCceEeccCC-eeEEecC------------------CcEEEecc
Q 039754 73 GTLCHAVIQNG---PLWIIFARDMHIKLSQELIMT-NDKTIDARGA-DVHIAYG------------------AGIMIQHV 129 (147)
Q Consensus 73 GsLr~Av~~~~---P~~IvF~vsG~I~L~~~L~v~-s~kTI~G~ga-~v~I~~G------------------~Gi~i~~~ 129 (147)
-|+.+||..-. -+++|+=..|+-+ +.|.|. +++||.|.+. ...|+.+ .-|.+ .+
T Consensus 45 ~TIq~Ai~aa~~~~~~~~I~I~~G~Y~--E~v~I~k~~itl~G~g~~~TiIt~~~~~~~~~~~g~~~gt~~saTv~V-~a 121 (364)
T 3uw0_A 45 SSINAALKSAPKDDTPFIIFLKNGVYT--ERLEVARSHVTLKGENRDGTVIGANTAAGMLNPQGEKWGTSGSSTVLV-NA 121 (364)
T ss_dssp CCHHHHHHHSCSSSSCEEEEECSEEEC--CCEEECSTTEEEEESCTTTEEEEECCCTTSBCTTCSBCCTTTCCSEEE-CS
T ss_pred ccHHHHHhhcccCCCcEEEEEeCCEEE--EEEEEcCCeEEEEecCCCCeEEEccccccccccccccccccCeeEEEE-EC
Confidence 47888886521 1334443577654 456664 6899999885 3555521 22333 78
Q ss_pred CcEEEEceEEeeee
Q 039754 130 KNVILHGHSIHYIF 143 (147)
Q Consensus 130 sNVIIrnL~I~~v~ 143 (147)
+|++++||.|++--
T Consensus 122 ~~f~a~nitf~Nt~ 135 (364)
T 3uw0_A 122 PNFTAENLTIRNDF 135 (364)
T ss_dssp TTCEEEEEEEEECC
T ss_pred CCEEEEeeeeEcCC
Confidence 99999999998863
No 18
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=70.46 E-value=9.4 Score=31.48 Aligned_cols=20 Identities=20% Similarity=0.308 Sum_probs=17.0
Q ss_pred cEEEeccCcEEEEceEEeee
Q 039754 123 GIMIQHVKNVILHGHSIHYI 142 (147)
Q Consensus 123 Gi~i~~~sNVIIrnL~I~~v 142 (147)
.|.+.+++||.|++|+|.+.
T Consensus 102 ~i~~~~~~nv~i~~i~i~ns 121 (336)
T 1nhc_A 102 FMYIHDVEDSTFKGINIKNT 121 (336)
T ss_dssp CEEEEEEEEEEEESCEEECC
T ss_pred EEEEeeeCcEEEEEEEEEeC
Confidence 47888899999999999864
No 19
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=68.71 E-value=9.5 Score=31.47 Aligned_cols=20 Identities=10% Similarity=0.104 Sum_probs=16.1
Q ss_pred cEEEeccCcEEEEceEEeee
Q 039754 123 GIMIQHVKNVILHGHSIHYI 142 (147)
Q Consensus 123 Gi~i~~~sNVIIrnL~I~~v 142 (147)
.|.+.+++||.|++|+|.+.
T Consensus 102 ~i~~~~~~nv~i~giti~ns 121 (339)
T 2iq7_A 102 FFYAHSLKSSNIKGLNVLNT 121 (339)
T ss_dssp CEEEEEEEEEEEECCEEECC
T ss_pred EEEEeeeCcEEEEEEEEEeC
Confidence 47788888888888888764
No 20
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=64.86 E-value=13 Score=30.78 Aligned_cols=20 Identities=15% Similarity=0.157 Sum_probs=15.9
Q ss_pred cEEEeccCcEEEEceEEeee
Q 039754 123 GIMIQHVKNVILHGHSIHYI 142 (147)
Q Consensus 123 Gi~i~~~sNVIIrnL~I~~v 142 (147)
.|.+.+++||.|++|+|.+.
T Consensus 106 ~i~~~~~~nv~i~~i~i~ns 125 (339)
T 1ia5_A 106 FFAAHSLTNSVISGLKIVNS 125 (339)
T ss_dssp CEEEEEEEEEEEESCEEECC
T ss_pred EEEEeecCcEEEEEEEEEcC
Confidence 47788888888888888764
No 21
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=57.66 E-value=11 Score=33.12 Aligned_cols=26 Identities=15% Similarity=0.164 Sum_probs=20.8
Q ss_pred eceEEEeCceeecC-CCceEeccCCee
Q 039754 91 RDMHIKLSQELIMT-NDKTIDARGADV 116 (147)
Q Consensus 91 vsG~I~L~~~L~v~-s~kTI~G~ga~v 116 (147)
-.|+.+|+..+.|. ||+||.|.+.++
T Consensus 63 ~~G~Y~l~g~ivIdkp~LtL~G~~~g~ 89 (410)
T 2inu_A 63 PPGDYDLHTQVVVDVSYLTIAGFGHGF 89 (410)
T ss_dssp CSEEEEECSCEEECCTTEEEECSCCCC
T ss_pred CCCeeccCCcEEEecCcEEEEecCCCc
Confidence 58999998888886 679999987443
No 22
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=55.13 E-value=22 Score=31.10 Aligned_cols=18 Identities=17% Similarity=0.270 Sum_probs=15.4
Q ss_pred EEEeccCcEEEEceEEee
Q 039754 124 IMIQHVKNVILHGHSIHY 141 (147)
Q Consensus 124 i~i~~~sNVIIrnL~I~~ 141 (147)
|.+.+++||.|+||+|.+
T Consensus 135 i~~~~~~Nv~I~gIti~n 152 (464)
T 1h80_A 135 FKLGDVRNYKISNFTIDD 152 (464)
T ss_dssp EEECSEEEEEEEEEEEEC
T ss_pred EEEEeeccEEEeeeEEec
Confidence 567889999999999875
No 23
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=50.38 E-value=31 Score=30.26 Aligned_cols=40 Identities=15% Similarity=0.050 Sum_probs=27.9
Q ss_pred hHHHHHhc-----CCCeEEEEeeceEEEeCceeec---CCCceEeccCCe
Q 039754 74 TLCHAVIQ-----NGPLWIIFARDMHIKLSQELIM---TNDKTIDARGAD 115 (147)
Q Consensus 74 sLr~Av~~-----~~P~~IvF~vsG~I~L~~~L~v---~s~kTI~G~ga~ 115 (147)
|+.+||.. +..+++||=..|+-+ +.|.| +.++||.|.|.+
T Consensus 91 TIqeAVdaap~~~~~~r~vI~Ik~GvY~--E~V~Ip~~K~~ItL~G~G~~ 138 (422)
T 3grh_A 91 TIQAAVDAAIIKRTNKRQYIAVMPGEYQ--GTVYVPAAPGGITLYGTGEK 138 (422)
T ss_dssp SHHHHHHHHHTTCCSSCEEEEECSEEEE--SCEEECCCSSCEEEEECSSS
T ss_pred CHHHHHHhchhcCCCccEEEEEeCCeEe--eeEEecCCCCcEEEEeccCC
Confidence 78888754 233566665688876 45667 378999998873
No 24
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=50.09 E-value=31 Score=28.81 Aligned_cols=20 Identities=10% Similarity=0.097 Sum_probs=16.6
Q ss_pred cEEEeccCcEEEEceEEeee
Q 039754 123 GIMIQHVKNVILHGHSIHYI 142 (147)
Q Consensus 123 Gi~i~~~sNVIIrnL~I~~v 142 (147)
.|.+.+++||.|++|++.+-
T Consensus 128 ~i~~~~~~nv~i~~iti~ns 147 (362)
T 1czf_A 128 FFYAHGLDSSSITGLNIKNT 147 (362)
T ss_dssp CEEEEEEETEEEESCEEECC
T ss_pred EEEEeecccEEEEEEEEecC
Confidence 47888899999999988764
No 25
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=49.21 E-value=16 Score=30.44 Aligned_cols=20 Identities=30% Similarity=0.175 Sum_probs=13.6
Q ss_pred CcEEEeccCcEEEEceEEee
Q 039754 122 AGIMIQHVKNVILHGHSIHY 141 (147)
Q Consensus 122 ~Gi~i~~~sNVIIrnL~I~~ 141 (147)
..|.+.+++||.|++|+|.+
T Consensus 152 ~~i~~~~~~nv~I~~iti~n 171 (376)
T 1bhe_A 152 RLIQINKSKNFTLYNVSLIN 171 (376)
T ss_dssp CSEEEESCEEEEEEEEEEEC
T ss_pred eEEEEEcceEEEEEeEEEEC
Confidence 45666777777777777765
No 26
>3n6z_A Putative immunoglobulin A1 protease; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.30A {Bacteroides ovatus}
Probab=41.06 E-value=29 Score=29.55 Aligned_cols=111 Identities=13% Similarity=0.112 Sum_probs=47.5
Q ss_pred ccCcCCCCCcccccCCcchhccccCccCCCccccc--------CCCCCCC--CcEEEEcCCCCCCCCCCCCchHHHHHhc
Q 039754 12 GPCQATNPVDRCWRCWKDWANYRPKLADCVPGFGH--------KITGGQK--GPIYIVTDSSDNDFINSKPGTLCHAVIQ 81 (147)
Q Consensus 12 ~~~~~~n~id~cwr~~~~W~~~r~~la~~a~GfG~--------~ttGGrg--G~vy~VT~l~d~d~~~p~~GsLr~Av~~ 81 (147)
.+|.--||+|+-=| .|-|.. +|++|-+. .-.+|.| ...|.+++.+|. --|++.+..
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~f~~G~GT~~~pY~I~t~~dL-------~~~~~~vn~ 67 (363)
T 3n6z_A 2 ISCSDPNPLDSYTR-VPFEKT------ETDDGNGDGDGDGAGGLFEKGNGTDSKPYMIMNATQI-------RNMRSVLKS 67 (363)
T ss_dssp ---------CCSSS-CC--------------------CHHHHHTSSBCCSSSSSCEEECSHHHH-------TTHHHHCCT
T ss_pred cccCCCCccccccc-CCCCcc------ccccCCCCCCCCCcccccCCCCCCcCccEEeCCHHHH-------HHHHHhhcc
Confidence 47999999997632 333432 24443321 3344444 356999998772 013343322
Q ss_pred CCCeEEEEeeceEEEeCce---eecC-----CCc-eEeccCCeeEEecCCcEEEe--------ccCcEEEEceEEeeee
Q 039754 82 NGPLWIIFARDMHIKLSQE---LIMT-----NDK-TIDARGADVHIAYGAGIMIQ--------HVKNVILHGHSIHYIF 143 (147)
Q Consensus 82 ~~P~~IvF~vsG~I~L~~~---L~v~-----s~k-TI~G~ga~v~I~~G~Gi~i~--------~~sNVIIrnL~I~~v~ 143 (147)
. .-..|...--|.|... ..|. +++ |.+|++.. |. +|++. ..-+-.||||+|.++.
T Consensus 68 g--~~~~~~L~~DIdl~~~~~w~PIG~~~~~~F~G~FDG~ght--I~---nL~i~~~~~~GLFg~i~g~I~Nl~l~~~~ 139 (363)
T 3n6z_A 68 G--MKVYFQLGADIDMAGIDDWQSLNGSGDFPYEIDFDGDSHV--IK---NFKCSAGDYPSFFGVLCGDCRNVGFVNAS 139 (363)
T ss_dssp T--SCEEEEESSCEECTTCCCCCCTTCSTTCCCCEEEEEEEEE--EE---SCEECSSSSCSSSSEECEEEEEEEEEEEE
T ss_pred C--CceEEEEeCCEecCCCcccccCccCCCCceEEEECCCCeE--Ee---eeEcCCCCceeEEEEeeEEEEEEEEEeee
Confidence 1 1244555556777654 2233 244 88888873 33 23322 1113578888888765
No 27
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=38.29 E-value=50 Score=29.69 Aligned_cols=14 Identities=14% Similarity=0.014 Sum_probs=11.9
Q ss_pred ccCcEEEEceEEee
Q 039754 128 HVKNVILHGHSIHY 141 (147)
Q Consensus 128 ~~sNVIIrnL~I~~ 141 (147)
+++||.|++|+|.+
T Consensus 331 ~c~NV~I~Giti~N 344 (574)
T 1ogo_X 331 GGQTWYCVGPTINA 344 (574)
T ss_dssp SSEEEEEESCEEEC
T ss_pred CceeEEEECeEEEC
Confidence 78889999988876
No 28
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=36.00 E-value=35 Score=29.02 Aligned_cols=9 Identities=11% Similarity=0.213 Sum_probs=5.2
Q ss_pred CceEeccCC
Q 039754 106 DKTIDARGA 114 (147)
Q Consensus 106 ~kTI~G~ga 114 (147)
.=||+|+|.
T Consensus 109 ~G~IdG~G~ 117 (422)
T 1rmg_A 109 KGAVQGFGY 117 (422)
T ss_dssp CCEEECCTH
T ss_pred CEEEECCcc
Confidence 346677663
No 29
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=35.62 E-value=23 Score=30.66 Aligned_cols=19 Identities=21% Similarity=0.296 Sum_probs=13.6
Q ss_pred cEEEeccCcEEEEceEEee
Q 039754 123 GIMIQHVKNVILHGHSIHY 141 (147)
Q Consensus 123 Gi~i~~~sNVIIrnL~I~~ 141 (147)
-|.+.+++||.|++|++.+
T Consensus 192 ~i~~~~~~nv~i~giti~n 210 (448)
T 3jur_A 192 FVQFYRCRNVLVEGVKIIN 210 (448)
T ss_dssp SEEEESCEEEEEESCEEES
T ss_pred EEEEEcccceEEEeeEEEe
Confidence 5667777777777777765
No 30
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=32.56 E-value=25 Score=22.38 Aligned_cols=28 Identities=11% Similarity=0.338 Sum_probs=19.7
Q ss_pred CCcEEEEcCCCCCCCCCCCCchHHHHHhc----CCCeEEEEe
Q 039754 53 KGPIYIVTDSSDNDFINSKPGTLCHAVIQ----NGPLWIIFA 90 (147)
Q Consensus 53 gG~vy~VT~l~d~d~~~p~~GsLr~Av~~----~~P~~IvF~ 90 (147)
||.+..+++.++ |..++.+ +.|..|.|-
T Consensus 1 g~~v~~i~~~~~----------~~~~l~~~~~~~~~~vv~f~ 32 (112)
T 1ep7_A 1 GGSVIVIDSKAA----------WDAQLAKGKEEHKPIVVDFT 32 (112)
T ss_dssp CCSEEEECSHHH----------HHHHHHHHHHHTCCEEEEEE
T ss_pred CCcEEEecCHHH----------HHHHHHhhcccCCeEEEEEE
Confidence 567888887655 7777765 667777774
No 31
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=31.75 E-value=83 Score=25.74 Aligned_cols=20 Identities=10% Similarity=0.238 Sum_probs=15.2
Q ss_pred CCcEEEeccCcEEEEceEEe
Q 039754 121 GAGIMIQHVKNVILHGHSIH 140 (147)
Q Consensus 121 G~Gi~i~~~sNVIIrnL~I~ 140 (147)
..||.+..++||.|+|-.|+
T Consensus 154 tDGid~~~s~nV~I~n~~i~ 173 (339)
T 2iq7_A 154 TDAFDVGSSTGVYISGANVK 173 (339)
T ss_dssp CCSEEEESCEEEEEESCEEE
T ss_pred CCcEEEcCcceEEEEecEEe
Confidence 45777777888888888775
No 32
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=30.57 E-value=89 Score=25.60 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=15.4
Q ss_pred CCcEEEeccCcEEEEceEEe
Q 039754 121 GAGIMIQHVKNVILHGHSIH 140 (147)
Q Consensus 121 G~Gi~i~~~sNVIIrnL~I~ 140 (147)
..||.+..++||.|+|-.|+
T Consensus 158 tDGid~~~s~nV~I~n~~i~ 177 (339)
T 1ia5_A 158 TDAFDIGTSTYVTISGATVY 177 (339)
T ss_dssp CCSEEEESCEEEEEESCEEE
T ss_pred CCcEEecCCceEEEEeeEEE
Confidence 56777877888888887776
No 33
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=29.82 E-value=27 Score=22.13 Aligned_cols=30 Identities=7% Similarity=0.113 Sum_probs=19.7
Q ss_pred CCCCcEEEEcCCCCCCCCCCCCchHHHHHhc----CCCeEEEEe
Q 039754 51 GQKGPIYIVTDSSDNDFINSKPGTLCHAVIQ----NGPLWIIFA 90 (147)
Q Consensus 51 GrgG~vy~VT~l~d~d~~~p~~GsLr~Av~~----~~P~~IvF~ 90 (147)
|.+|.++.+++.++ +...+.. +.|..|.|-
T Consensus 1 ~~~~~v~~i~~~~~----------~~~~~~~~~~~~~~~vv~f~ 34 (113)
T 1ti3_A 1 AEEGQVIACHTVDT----------WKEHFEKGKGSQKLIVVDFT 34 (113)
T ss_dssp CCCCCEEEECSHHH----------HHHHHHHHTTSSSEEEEEEE
T ss_pred CCCCceeEeccHHH----------HHHHHHHhhhcCCeEEEEEE
Confidence 45678899988755 6777765 445555553
No 34
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=28.30 E-value=86 Score=25.88 Aligned_cols=59 Identities=17% Similarity=0.127 Sum_probs=34.4
Q ss_pred CCCeEEEEeeceEEEeCceeecC-----------CCceEeccCCee--EEecCCcEEEeccCcEEEEceEEe
Q 039754 82 NGPLWIIFARDMHIKLSQELIMT-----------NDKTIDARGADV--HIAYGAGIMIQHVKNVILHGHSIH 140 (147)
Q Consensus 82 ~~P~~IvF~vsG~I~L~~~L~v~-----------s~kTI~G~ga~v--~I~~G~Gi~i~~~sNVIIrnL~I~ 140 (147)
..|..|.|..+-.+.++.--..+ ++.+|.+..-.. .-....||.+..++||.|+|-.|.
T Consensus 149 ~rp~~i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~ 220 (376)
T 1bhe_A 149 NTPRLIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIA 220 (376)
T ss_dssp CCCCSEEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEE
T ss_pred CCCeEEEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEe
Confidence 46888888766555554311112 233443321000 001367899999999999999987
No 35
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=28.30 E-value=62 Score=26.73 Aligned_cols=21 Identities=19% Similarity=0.256 Sum_probs=16.4
Q ss_pred CCcEEEeccCcEEEEceEEee
Q 039754 121 GAGIMIQHVKNVILHGHSIHY 141 (147)
Q Consensus 121 G~Gi~i~~~sNVIIrnL~I~~ 141 (147)
..||.+..++||.|+|-.|+.
T Consensus 166 tDGid~~~s~nV~I~n~~i~~ 186 (349)
T 1hg8_A 166 TDGFDISSSDHVTLDNNHVYN 186 (349)
T ss_dssp CCSEEEESCEEEEEEEEEEEC
T ss_pred CCeEEEccccEEEEEeeEEec
Confidence 567888888888888888764
No 36
>1vib_A Neurotoxin B-IV; hydroxylation; HET: HYP; NMR {Cerebratulus lacteus} SCOP: g.2.2.1
Probab=28.00 E-value=13 Score=23.80 Aligned_cols=19 Identities=47% Similarity=0.809 Sum_probs=16.0
Q ss_pred CcccccCCcchhccccCcc
Q 039754 20 VDRCWRCWKDWANYRPKLA 38 (147)
Q Consensus 20 id~cwr~~~~W~~~r~~la 38 (147)
-|+|=||-..|+-+|-.-|
T Consensus 20 yd~ci~cqgkwagkrgkca 38 (55)
T 1vib_A 20 YDLCIRCQGKWAGKRGKCA 38 (55)
T ss_dssp HHHHCCTTGGGTTTHHHHH
T ss_pred hhHHheecceeccccCcch
Confidence 5899999999999886544
No 37
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=27.21 E-value=85 Score=27.02 Aligned_cols=60 Identities=13% Similarity=0.134 Sum_probs=34.5
Q ss_pred CCCeEEEEeeceEEEeCceeecC-----------CCceEeccCCeeEEecCCcEEEeccCcEEEEceEEee
Q 039754 82 NGPLWIIFARDMHIKLSQELIMT-----------NDKTIDARGADVHIAYGAGIMIQHVKNVILHGHSIHY 141 (147)
Q Consensus 82 ~~P~~IvF~vsG~I~L~~~L~v~-----------s~kTI~G~ga~v~I~~G~Gi~i~~~sNVIIrnL~I~~ 141 (147)
..|+.|.|..+-.+.++.--..+ +|.+|.+..-...-.+..||.+..++||.|+|..|..
T Consensus 188 ~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~ 258 (448)
T 3jur_A 188 LRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDT 258 (448)
T ss_dssp CCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEE
T ss_pred CCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEe
Confidence 45888888766555554321112 1334433321110013567888788899999999873
No 38
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=26.90 E-value=1.2e+02 Score=25.59 Aligned_cols=19 Identities=5% Similarity=0.011 Sum_probs=9.7
Q ss_pred CcEEEeccCcEEEEceEEe
Q 039754 122 AGIMIQHVKNVILHGHSIH 140 (147)
Q Consensus 122 ~Gi~i~~~sNVIIrnL~I~ 140 (147)
.+|.+..++||.|+|++|.
T Consensus 151 ~~i~i~~~~nv~I~n~~I~ 169 (422)
T 1rmg_A 151 FHFTMDTCSDGEVYNMAIR 169 (422)
T ss_dssp CSEEEEEEEEEEEEEEEEE
T ss_pred eEEEEeCcCCEEEEeEEEE
Confidence 3444445555555555554
No 39
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=26.19 E-value=1.1e+02 Score=25.77 Aligned_cols=23 Identities=17% Similarity=0.159 Sum_probs=20.4
Q ss_pred cCCcEEEeccCcEEEEceEEeee
Q 039754 120 YGAGIMIQHVKNVILHGHSIHYI 142 (147)
Q Consensus 120 ~G~Gi~i~~~sNVIIrnL~I~~v 142 (147)
++.+|.|.+++||+|.|..|...
T Consensus 152 ~~DaI~i~~s~nvwIDHcs~s~~ 174 (359)
T 1qcx_A 152 GGDAITVDDSDLVWIDHVTTARI 174 (359)
T ss_dssp SCCSEEEESCCCEEEESCEEEEE
T ss_pred cCceeEecCCceEEEEeeEeecc
Confidence 36899999999999999999875
No 40
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=24.00 E-value=1.3e+02 Score=24.46 Aligned_cols=20 Identities=20% Similarity=0.395 Sum_probs=16.2
Q ss_pred CCcEEEeccCcEEEEceEEe
Q 039754 121 GAGIMIQHVKNVILHGHSIH 140 (147)
Q Consensus 121 G~Gi~i~~~sNVIIrnL~I~ 140 (147)
..||.+..++||.|+|-.|+
T Consensus 153 tDGidi~~s~nV~I~n~~i~ 172 (336)
T 1nhc_A 153 TDGFDISESTGVYISGATVK 172 (336)
T ss_dssp CCSEEECSCEEEEEESCEEE
T ss_pred CCcEEecCCCeEEEEeCEEE
Confidence 56788888888888888886
No 41
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=21.01 E-value=2.9e+02 Score=21.98 Aligned_cols=40 Identities=13% Similarity=0.168 Sum_probs=28.4
Q ss_pred hHHHHHhc---CCCeEEEEeeceEEEeCc-------eeecCCCceEeccCC
Q 039754 74 TLCHAVIQ---NGPLWIIFARDMHIKLSQ-------ELIMTNDKTIDARGA 114 (147)
Q Consensus 74 sLr~Av~~---~~P~~IvF~vsG~I~L~~-------~L~v~s~kTI~G~ga 114 (147)
.|..|+.+ .++-+|+|- .|+..+.. .|.+.|++||.|.|.
T Consensus 21 aiq~Ai~~a~~~gg~~v~~p-~G~y~~~~~~~~~~g~l~~~~~v~l~g~g~ 70 (377)
T 2pyg_A 21 SIQAAIDAAYAAGGGTVYLP-AGEYRVSAAGEPGDGCLMLKDGVYLAGAGM 70 (377)
T ss_dssp HHHHHHHHHHHTTSEEEEEC-SEEEEECCCSSGGGCSEECCTTEEEEESSB
T ss_pred HHHHHHHHHHhcCCCEEEEC-CeEEEEcccccCCcccEEecCCeEEEEcCC
Confidence 36666643 345667764 68888764 788889999999874
No 42
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=20.17 E-value=1.1e+02 Score=25.96 Aligned_cols=22 Identities=9% Similarity=0.081 Sum_probs=16.4
Q ss_pred CcEEEeccCcEEEEceEEeeeec
Q 039754 122 AGIMIQHVKNVILHGHSIHYIFP 144 (147)
Q Consensus 122 ~Gi~i~~~sNVIIrnL~I~~v~~ 144 (147)
.||.+.. +|++|+|++||+...
T Consensus 130 ~GI~v~g-s~~~i~n~~i~~n~~ 151 (400)
T 1ru4_A 130 QGAYVIG-SHNTFENTAFHHNRN 151 (400)
T ss_dssp CSEEECS-SSCEEESCEEESCSS
T ss_pred CcEEEeC-CCcEEEeEEEECCCc
Confidence 3787765 777889999987643
No 43
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=20.02 E-value=36 Score=32.15 Aligned_cols=22 Identities=14% Similarity=0.113 Sum_probs=18.5
Q ss_pred CcEEEeccCcEEEEceEEeeee
Q 039754 122 AGIMIQHVKNVILHGHSIHYIF 143 (147)
Q Consensus 122 ~Gi~i~~~sNVIIrnL~I~~v~ 143 (147)
..|.+.+++||.|+|++|.+..
T Consensus 135 ~lI~f~~ckNV~I~gVti~NSp 156 (772)
T 3gqn_A 135 SNLSIRACHNVYIRDIEAVDCT 156 (772)
T ss_dssp CSEEEESCEEEEEEEEEEESCS
T ss_pred cEEEEEeeceEEEEeEEEEeCC
Confidence 3578899999999999998753
Done!