Query 039774
Match_columns 303
No_of_seqs 297 out of 2009
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 22:44:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039774.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039774hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 1.2E-65 4.3E-70 482.5 19.0 258 43-303 4-276 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 4.6E-58 1.6E-62 425.0 14.5 213 83-303 3-222 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.7E-57 6E-62 420.3 17.5 219 82-303 5-236 (312)
4 1dcs_A Deacetoxycephalosporin 100.0 8E-56 2.7E-60 408.9 14.6 210 82-303 3-231 (311)
5 3on7_A Oxidoreductase, iron/as 100.0 1.5E-54 5E-59 394.8 19.4 206 82-303 2-219 (280)
6 1odm_A Isopenicillin N synthas 100.0 2E-54 6.9E-59 402.8 13.2 212 82-303 7-258 (331)
7 3dkq_A PKHD-type hydroxylase S 77.8 4.3 0.00015 35.1 6.3 58 238-301 100-174 (243)
8 3itq_A Prolyl 4-hydroxylase, a 58.2 22 0.00075 29.9 6.5 72 212-298 94-179 (216)
9 1m5a_B Insulin B chain; alpha 50.3 16 0.00056 20.8 2.9 18 99-116 9-26 (30)
10 4ay7_A Methylcobalamin\: coenz 49.8 46 0.0016 29.8 7.6 43 97-139 302-348 (348)
11 2jig_A Prolyl-4 hydroxylase; h 48.5 29 0.001 28.9 5.7 15 284-298 170-184 (224)
12 2da7_A Zinc finger homeobox pr 44.2 4.3 0.00015 28.1 -0.2 39 195-233 16-54 (71)
13 2opi_A L-fuculose-1-phosphate 42.3 13 0.00043 31.2 2.4 36 83-122 125-160 (212)
14 2x4k_A 4-oxalocrotonate tautom 40.2 25 0.00085 22.4 3.2 24 205-228 18-41 (63)
15 2do1_A Nuclear protein HCC-1; 38.5 35 0.0012 22.2 3.6 40 86-136 7-46 (55)
16 3abf_A 4-oxalocrotonate tautom 37.5 33 0.0011 22.1 3.5 24 205-228 16-39 (64)
17 3o2g_A Gamma-butyrobetaine dio 37.4 14 0.00047 34.1 2.0 52 83-140 122-173 (388)
18 2fk5_A Fuculose-1-phosphate al 36.7 20 0.0007 29.6 2.8 36 83-122 117-153 (200)
19 1y66_A Engrailed homeodomain; 35.4 25 0.00086 21.6 2.3 42 190-231 3-44 (52)
20 1pvt_A Sugar-phosphate aldolas 35.3 20 0.00069 30.4 2.6 36 83-122 161-196 (238)
21 1e4c_P L-fuculose 1-phosphate 34.9 19 0.00066 30.1 2.4 36 83-122 122-157 (215)
22 1otf_A 4-oxalocrotonate tautom 33.6 36 0.0012 21.6 3.2 25 204-228 14-38 (62)
23 2opa_A Probable tautomerase YW 33.6 37 0.0013 21.5 3.2 25 204-228 14-38 (61)
24 2dbn_A Hypothetical protein YB 33.3 20 0.00067 33.9 2.3 53 82-139 99-151 (461)
25 2irp_A Putative aldolase class 31.6 26 0.00088 29.0 2.6 35 83-122 139-176 (208)
26 2v9l_A Rhamnulose-1-phosphate 31.1 23 0.00078 30.9 2.3 36 83-122 179-214 (274)
27 1otj_A Alpha-ketoglutarate-dep 30.0 51 0.0017 28.3 4.4 52 81-139 15-66 (283)
28 2nys_A AGR_C_3712P; SSPB, stri 28.4 35 0.0012 27.7 2.7 62 204-282 14-81 (176)
29 3ry0_A Putative tautomerase; o 28.0 51 0.0017 21.4 3.2 25 204-228 14-38 (65)
30 2hbt_A EGL nine homolog 1; pro 27.7 71 0.0024 27.2 4.8 161 101-300 15-190 (247)
31 2ww6_A Fibritin, T4 fibritin; 27.0 46 0.0016 18.2 2.1 13 276-288 12-24 (27)
32 2qas_A SSPB, hypothetical prot 26.6 33 0.0011 27.4 2.2 62 204-282 22-89 (157)
33 3ocr_A Class II aldolase/adduc 26.3 35 0.0012 29.8 2.6 37 83-122 156-192 (273)
34 2iuw_A Alkylated repair protei 25.8 97 0.0033 26.2 5.3 58 238-301 127-203 (238)
35 3r1j_A Alpha-ketoglutarate-dep 25.8 78 0.0027 27.8 4.9 53 81-140 19-72 (301)
36 3m21_A Probable tautomerase HP 25.7 59 0.002 21.3 3.2 25 204-228 17-41 (67)
37 1oih_A Putative alkylsulfatase 25.7 67 0.0023 27.9 4.4 52 81-139 25-77 (301)
38 3m20_A 4-oxalocrotonate tautom 25.2 52 0.0018 21.2 2.8 25 204-228 13-37 (62)
39 3tht_A Alkylated DNA repair pr 24.9 76 0.0026 28.7 4.7 57 238-301 199-262 (345)
40 1gyx_A YDCE, B1461, hypothetic 24.3 63 0.0021 21.8 3.2 25 204-228 15-39 (76)
41 3mb2_A 4-oxalocrotonate tautom 24.1 62 0.0021 21.5 3.1 25 204-228 15-39 (72)
42 1zav_A 50S ribosomal protein L 24.1 1.5E+02 0.0052 23.8 6.0 40 98-137 8-48 (180)
43 2qt7_A Receptor-type tyrosine- 23.6 45 0.0016 24.1 2.3 32 210-241 19-51 (91)
44 2j01_J 50S ribosomal protein L 23.3 1.5E+02 0.0052 23.6 5.8 39 98-136 6-46 (173)
45 3i3q_A Alpha-ketoglutarate-dep 22.6 78 0.0027 26.4 4.0 57 238-301 106-172 (211)
46 3jsy_A Acidic ribosomal protei 21.6 91 0.0031 26.0 4.2 38 98-135 5-43 (213)
47 3m0z_A Putative aldolase; MCSG 20.1 1.3E+02 0.0044 25.7 4.7 41 95-136 169-210 (249)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1.2e-65 Score=482.50 Aligned_cols=258 Identities=30% Similarity=0.478 Sum_probs=222.9
Q ss_pred ccchHHHHhcCCCCCCccccCCCCCCCCCCCC--CC---CCCCCCCcceeeCCCCCC--CCChHHHHHHHHHHHhhcCeE
Q 039774 43 KVGVKGLVDLGVTAIPRFFIHPPATLADLRPK--SK---TRPVSDVVPTIDLSGVDS--DDLRPTIVEKIACASRELGFF 115 (303)
Q Consensus 43 ~~~v~~l~~~~~~~vP~~f~~p~~~~~~~~~~--~~---~~~~~~~iPvIDls~l~~--~~~r~~~~~~l~~A~~~~GFF 115 (303)
.++||+|+++|+++||++|++|+++++..... .. . ..+||||||+.+.+ +..|.+++++|++||++||||
T Consensus 4 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~---~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF 80 (356)
T 1gp6_A 4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKED---GPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVM 80 (356)
T ss_dssp CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCC---SCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEE
T ss_pred cccHHHHHhcCCCCCCHHhcCCchhccccccccccccccc---CCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEE
Confidence 46899999999999999999998887752110 00 1 13699999999862 234678999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHhCCCccccccccccCC-CCceeeccccccccccCCCcccceeeeccCCC-CCCccch-
Q 039774 116 QVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRREN-TKGVSYISNIDLFHSKAASWRDTLQIRLGLTE-PELEEVP- 192 (303)
Q Consensus 116 ~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~-~~~~gY~~~~~~~~~~~~d~~e~~~~~~~p~~-~~p~~~P- 192 (303)
||+||||+.++++++++.+++||+||.|+|+++..... ....||+........+..||+|.|++...|.. ..++.||
T Consensus 81 ~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~ 160 (356)
T 1gp6_A 81 HLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPK 160 (356)
T ss_dssp EEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCC
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCC
Confidence 99999999999999999999999999999999965543 46789987655555667899999998765532 2344555
Q ss_pred --hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCChhhhhhccc---CCCceeeeecCCCCCCCCCcccccccccCCceEE
Q 039774 193 --EICRKEAVEWNHHVKQLGELLFGLLCEGLGLKTDKLKENTF---LEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTI 267 (303)
Q Consensus 193 --~~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~~~~~~~~~---~~~~~lr~~~YP~~~~~~~~~g~~~HtD~g~lTl 267 (303)
+.||+++++|+++|.+|+.+|+++||++|||++++|.+.+. ...+.||+||||||++++.++|+++|||+|+|||
T Consensus 161 ~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTl 240 (356)
T 1gp6_A 161 TPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF 240 (356)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEE
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEE
Confidence 58999999999999999999999999999999999998775 3567899999999999999999999999999999
Q ss_pred EecCCCCCceEEeCCeEEEeccCCCcEEEeeCccCC
Q 039774 268 LLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQ 303 (303)
Q Consensus 268 L~qd~~~GLQV~~~g~Wv~V~p~pgalvVNvGD~Lq 303 (303)
|+||+++||||+++|+|++|+|+||+|||||||+||
T Consensus 241 L~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~ 276 (356)
T 1gp6_A 241 ILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLE 276 (356)
T ss_dssp EEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred EEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHH
Confidence 999999999999999999999999999999999986
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=4.6e-58 Score=425.02 Aligned_cols=213 Identities=31% Similarity=0.523 Sum_probs=187.4
Q ss_pred CcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCceeeccc
Q 039774 83 VVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISN 162 (303)
Q Consensus 83 ~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~gY~~~ 162 (303)
+||||||+.+. +.+|.+++++|++||++||||||+|||||.++++++++.+++||+||.|+|+++... ..||...
T Consensus 3 ~iPvIDls~l~-~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy~~~ 77 (319)
T 1w9y_A 3 NFPIISLDKVN-GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKALEGV 77 (319)
T ss_dssp CCCEEEGGGGG-STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTC
T ss_pred CCCEEECcccC-cccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCCCcc
Confidence 59999999875 456888999999999999999999999999999999999999999999999997432 2477543
Q ss_pred cccccccCCCcccceeeeccCCCCCCccch---hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCChhhhhhcccC---CC
Q 039774 163 IDLFHSKAASWRDTLQIRLGLTEPELEEVP---EICRKEAVEWNHHVKQLGELLFGLLCEGLGLKTDKLKENTFL---EG 236 (303)
Q Consensus 163 ~~~~~~~~~d~~e~~~~~~~p~~~~p~~~P---~~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~~~~~~~~~~---~~ 236 (303)
. ...+..||+|.|.+...|.. .++.|| +.||+++++|+++|.+|+.+|+++||++|||++++|.+.+.. ..
T Consensus 78 ~--~e~~~~d~ke~~~~~~~p~~-~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~ 154 (319)
T 1w9y_A 78 Q--AEVTDMDWESTFFLKHLPIS-NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPN 154 (319)
T ss_dssp C--CCGGGCCCCEEEEEEEESCC-GGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCE
T ss_pred c--ccCCCCChhhheeeecCCcc-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCcc
Confidence 2 22456899999998766542 344555 689999999999999999999999999999999999987642 34
Q ss_pred ceeeeecCCCCCCCCCcccccccccCCceEEEecC-CCCCceEEeCCeEEEeccCCCcEEEeeCccCC
Q 039774 237 RMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQD-DKGGLQIKHGEEWVDVKPVPGALVINIGDILQ 303 (303)
Q Consensus 237 ~~lr~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLQV~~~g~Wv~V~p~pgalvVNvGD~Lq 303 (303)
+.+|+||||||++|+.++|+++|||+|+||||+|| +++||||+++|+|++|+|+||+|||||||+||
T Consensus 155 ~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~ 222 (319)
T 1w9y_A 155 FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLE 222 (319)
T ss_dssp EEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred ceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHH
Confidence 68999999999999999999999999999999995 79999999999999999999999999999986
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.7e-57 Score=420.30 Aligned_cols=219 Identities=19% Similarity=0.273 Sum_probs=186.8
Q ss_pred CCcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCceeecc
Q 039774 82 DVVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYIS 161 (303)
Q Consensus 82 ~~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~gY~~ 161 (303)
.+||||||+.+. .++++++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++... ....+||..
T Consensus 5 ~~iPvIDls~~~--~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~Gy~~ 81 (312)
T 3oox_A 5 SAIDPVSFSLYA--KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGYIP 81 (312)
T ss_dssp CSSCCEETHHHH--HCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSEEEC
T ss_pred CCCCeEEChHhc--ccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCcccccc
Confidence 579999999775 26788999999999999999999999999999999999999999999999998654 445678864
Q ss_pred cccc--ccccCCCcccceeeecc-CC-C-----CCCccch---hhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCChhhhh
Q 039774 162 NIDL--FHSKAASWRDTLQIRLG-LT-E-----PELEEVP---EICRKEAVEWNHHVKQLGELLFGLLCEGLGLKTDKLK 229 (303)
Q Consensus 162 ~~~~--~~~~~~d~~e~~~~~~~-p~-~-----~~p~~~P---~~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~~~~~ 229 (303)
.... ......||+|.|.+... +. . ..++.|| +.||+++++|+++|.+|+.+|+++||++|||++++|.
T Consensus 82 ~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~ 161 (312)
T 3oox_A 82 FGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFK 161 (312)
T ss_dssp CCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTH
T ss_pred ccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHH
Confidence 3221 12356899999987431 11 1 1245565 6799999999999999999999999999999999999
Q ss_pred hcccCCCceeeeecCCCCCCCCCcccccccccCCceEEEecCCCCCceEEe-CCeEEEeccCCCcEEEeeCccCC
Q 039774 230 ENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH-GEEWVDVKPVPGALVINIGDILQ 303 (303)
Q Consensus 230 ~~~~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLQV~~-~g~Wv~V~p~pgalvVNvGD~Lq 303 (303)
+.+....+.+|+||||||++++..+|+++|||+|+||||+||+++||||+. +|+|++|+|+||+|||||||+||
T Consensus 162 ~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~ 236 (312)
T 3oox_A 162 PTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLE 236 (312)
T ss_dssp HHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHH
T ss_pred HHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHH
Confidence 987766778999999999987656999999999999999999999999975 59999999999999999999986
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=8e-56 Score=408.86 Aligned_cols=210 Identities=15% Similarity=0.171 Sum_probs=171.8
Q ss_pred CCcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCCCHHHHHHHHHHHHHHhCCC-ccccccccccCCCCceeec
Q 039774 82 DVVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQP-PEIKAPVYRRENTKGVSYI 160 (303)
Q Consensus 82 ~~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP-~eeK~~~~~~~~~~~~gY~ 160 (303)
.+||||||+.+.++.. .++|++||++||||||+||||+.++++++++.+++||+|| .|+|+++........+||.
T Consensus 3 ~~iPvIDls~l~~~~~----~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~ 78 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLH----QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFT 78 (311)
T ss_dssp CCCCEEEHHHHHTTCS----HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEE
T ss_pred CCCcEEEchhhcCCCH----HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCcee
Confidence 4699999997752222 1389999999999999999999999999999999999999 9999999765555678997
Q ss_pred ccccc------ccccCCCcccceeeeccCCCCCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCC----Chhhhhh
Q 039774 161 SNIDL------FHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQLGELLFGLLCEGLGL----KTDKLKE 230 (303)
Q Consensus 161 ~~~~~------~~~~~~d~~e~~~~~~~p~~~~p~~~P~~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl----~~~~~~~ 230 (303)
..+.. ...+..||+|.|.+...|+ .|| |+.||+++++|+++|.+|+.+|+++|+++||| ++++|.+
T Consensus 79 ~~~~e~~~~~~~~~~~~d~~E~~~~~~~~n-~wP---~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~ 154 (311)
T 1dcs_A 79 GLESESTAQITNTGSYSDYSMCYSMGTADN-LFP---SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLD 154 (311)
T ss_dssp EC-----------------CEEEEECSSSC-CCS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHS
T ss_pred eccccccccccCCCCCCCcceeeeccCCCC-CCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhh
Confidence 65432 2245789999999876544 455 57899999999999999999999999999999 8888876
Q ss_pred cccCCCceeeeecCCCCCCCC--C--cccccccccCCceEEEecC-CCCC---ceEEeCCeEEEeccCCCcEEEeeCccC
Q 039774 231 NTFLEGRMMVGHYYPYCPQPD--L--TVGITSHTDPGPLTILLQD-DKGG---LQIKHGEEWVDVKPVPGALVINIGDIL 302 (303)
Q Consensus 231 ~~~~~~~~lr~~~YP~~~~~~--~--~~g~~~HtD~g~lTlL~qd-~~~G---LQV~~~g~Wv~V~p~pgalvVNvGD~L 302 (303)
. .+.+|+||||||++++ . .+|+++|||+|+||||+|| +++| |||+++|+|++|+|+||+|||||||+|
T Consensus 155 ~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l 230 (311)
T 1dcs_A 155 C----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIA 230 (311)
T ss_dssp C----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHH
T ss_pred c----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHH
Confidence 5 5689999999999874 3 6789999999999999998 8999 999999999999999999999999998
Q ss_pred C
Q 039774 303 Q 303 (303)
Q Consensus 303 q 303 (303)
|
T Consensus 231 ~ 231 (311)
T 1dcs_A 231 T 231 (311)
T ss_dssp H
T ss_pred H
Confidence 6
No 5
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.5e-54 Score=394.84 Aligned_cols=206 Identities=21% Similarity=0.268 Sum_probs=171.6
Q ss_pred CCcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCceeecc
Q 039774 82 DVVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYIS 161 (303)
Q Consensus 82 ~~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~gY~~ 161 (303)
++||||||+.. +++++|.+||++||||||+|||||.++++++++.+++||+| |+|+++.. ++....||.+
T Consensus 2 ~~IPvIDls~~-------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~-~~~~~~GY~~ 71 (280)
T 3on7_A 2 MKLETIDYRAA-------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMF-NRETHDGFFP 71 (280)
T ss_dssp --CCEEETTST-------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBC-CTTTCCEEEC
T ss_pred CCCCEEECCCh-------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhcc-CCCCCCcccc
Confidence 46999999863 26899999999999999999999999999999999999997 88999854 3456789976
Q ss_pred cc-c--cccccCCCcccceeeeccCCCCCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCh--hh---hhhccc
Q 039774 162 NI-D--LFHSKAASWRDTLQIRLGLTEPELEEVPEICRKEAVEWNHHVKQLGELLFGLLCEGLGLKT--DK---LKENTF 233 (303)
Q Consensus 162 ~~-~--~~~~~~~d~~e~~~~~~~p~~~~p~~~P~~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~--~~---~~~~~~ 233 (303)
.. . .......||+|.|.+. | |+ .+|+.||+++++|+++|.+|+.+|+++||++||++. ++ |.+.+.
T Consensus 72 ~~~~e~~~~~~~~D~kE~~~~~--p---~~-~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~ 145 (280)
T 3on7_A 72 ASISETAKGHTVKDIKEYYHVY--P---WG-RIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIA 145 (280)
T ss_dssp CC--------CCCCSCEEEEEC--T---TS-CCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHT
T ss_pred CccccccCCCCcccHHHHHhcC--C---CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhc
Confidence 43 1 1123468999998763 3 33 357899999999999999999999999999999863 33 444444
Q ss_pred CCC-ceeeeecCCCCCCCC--CcccccccccCCceEEEecCCCCCceEEe-CCeEEEeccCCCcEEEeeCccCC
Q 039774 234 LEG-RMMVGHYYPYCPQPD--LTVGITSHTDPGPLTILLQDDKGGLQIKH-GEEWVDVKPVPGALVINIGDILQ 303 (303)
Q Consensus 234 ~~~-~~lr~~~YP~~~~~~--~~~g~~~HtD~g~lTlL~qd~~~GLQV~~-~g~Wv~V~p~pgalvVNvGD~Lq 303 (303)
... +.+|+||||||+.++ .++|+++|||+|+||||+||+++||||+. +|+|++|+|+||++||||||+||
T Consensus 146 ~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~ 219 (280)
T 3on7_A 146 NSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQ 219 (280)
T ss_dssp TCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHH
T ss_pred CCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHH
Confidence 443 789999999999765 57999999999999999999999999995 59999999999999999999986
No 6
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=2e-54 Score=402.79 Aligned_cols=212 Identities=22% Similarity=0.274 Sum_probs=181.1
Q ss_pred CCcceeeCCCCC--CCCChHHHHHHHHHHHhhcCeEEEEcCCCCHHHHHHHHHHHHHH-hCCCccccccccccCCCCcee
Q 039774 82 DVVPTIDLSGVD--SDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGF-HEQPPEIKAPVYRRENTKGVS 158 (303)
Q Consensus 82 ~~iPvIDls~l~--~~~~r~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~F-F~lP~eeK~~~~~~~~~~~~g 158 (303)
.+||||||+.|. +++.|.+++++|++||++||||||+|||| +++++++.+++| |+||.|+|+++.. +|
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------~G 77 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------RA 77 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC------TT
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh------cC
Confidence 579999999885 22457789999999999999999999999 999999999999 9999999999853 35
Q ss_pred eccccc--ccc------ccCCCcccceeeeccCC-----------CCCCccch-----hhhhhhHHHHHHHHHHHHHHHH
Q 039774 159 YISNID--LFH------SKAASWRDTLQIRLGLT-----------EPELEEVP-----EICRKEAVEWNHHVKQLGELLF 214 (303)
Q Consensus 159 Y~~~~~--~~~------~~~~d~~e~~~~~~~p~-----------~~~p~~~P-----~~fr~~~~~y~~~~~~l~~~Ll 214 (303)
|..... ... .+..||+|.|++...+. ...++.|| ++||+++++|+++|.+|+.+|+
T Consensus 78 y~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll 157 (331)
T 1odm_A 78 YNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALL 157 (331)
T ss_dssp TCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 543211 111 25689999998864321 01244555 4799999999999999999999
Q ss_pred HHHHhhcCCChhhhhhcccCCCceee--eecCC------C---CCCCCC-cccccccccCCceEEEecCCCCCceEE-eC
Q 039774 215 GLLCEGLGLKTDKLKENTFLEGRMMV--GHYYP------Y---CPQPDL-TVGITSHTDPGPLTILLQDDKGGLQIK-HG 281 (303)
Q Consensus 215 ~~la~~Lgl~~~~~~~~~~~~~~~lr--~~~YP------~---~~~~~~-~~g~~~HtD~g~lTlL~qd~~~GLQV~-~~ 281 (303)
++||++|||++++|.+.+....+.+| +|||| | |++|+. .+|+++|||+|+||||+||+++||||+ ++
T Consensus 158 ~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~~ 237 (331)
T 1odm_A 158 KGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETAA 237 (331)
T ss_dssp HHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEETT
T ss_pred HHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEcCC
Confidence 99999999999999998776777899 99999 8 888887 899999999999999999999999999 45
Q ss_pred CeEEEeccCCCcEEEeeCccCC
Q 039774 282 EEWVDVKPVPGALVINIGDILQ 303 (303)
Q Consensus 282 g~Wv~V~p~pgalvVNvGD~Lq 303 (303)
| |++|+|+||+|||||||+||
T Consensus 238 g-Wi~V~p~pgalvVNiGD~l~ 258 (331)
T 1odm_A 238 G-YQDIEADDTGYLINCGSYMA 258 (331)
T ss_dssp E-EEECCCCTTSEEEEECHHHH
T ss_pred C-eEECCCCCCeEEEEccHHHH
Confidence 8 99999999999999999986
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=77.85 E-value=4.3 Score=35.11 Aligned_cols=58 Identities=21% Similarity=0.161 Sum_probs=36.6
Q ss_pred eeeeecCCCCCCCCCcccccccccCC-----------ceEEEec--C----CCCCceEEeCCeEEEeccCCCcEEEeeCc
Q 039774 238 MMVGHYYPYCPQPDLTVGITSHTDPG-----------PLTILLQ--D----DKGGLQIKHGEEWVDVKPVPGALVINIGD 300 (303)
Q Consensus 238 ~lr~~~YP~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d----~~~GLQV~~~g~Wv~V~p~pgalvVNvGD 300 (303)
-++++.|.+-. -..+|.|.. .+|+++. | +.|.|.+.....=..|+|..|.+|+.-.+
T Consensus 100 ~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s~ 173 (243)
T 3dkq_A 100 PPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPSS 173 (243)
T ss_dssp EEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEETT
T ss_pred cceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECCC
Confidence 46778887631 145676652 4666654 4 23456666554457899999999987654
Q ss_pred c
Q 039774 301 I 301 (303)
Q Consensus 301 ~ 301 (303)
+
T Consensus 174 ~ 174 (243)
T 3dkq_A 174 S 174 (243)
T ss_dssp S
T ss_pred C
Confidence 3
No 8
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=58.18 E-value=22 Score=29.94 Aligned_cols=72 Identities=17% Similarity=0.070 Sum_probs=38.7
Q ss_pred HHHHHHHhhcCCChhhhhhcccCCCceeeeecCCCCCCCCCcccccccccCC-----------ceEEEec--C-CCCCce
Q 039774 212 LLFGLLCEGLGLKTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPG-----------PLTILLQ--D-DKGGLQ 277 (303)
Q Consensus 212 ~Ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d-~~~GLQ 277 (303)
.|.+.|+..+|++.+.. -.+++.+|.+... ..+|.|+. .+|+|+- | ..||==
T Consensus 94 ~i~~Ri~~~~gl~~~~~--------E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPASHG--------EGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGGGB--------CCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceeccc--------cceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 34444444567754221 1355666755321 35666653 4788775 2 223422
Q ss_pred EEeCCeEEEeccCCCcEEEee
Q 039774 278 IKHGEEWVDVKPVPGALVINI 298 (303)
Q Consensus 278 V~~~g~Wv~V~p~pgalvVNv 298 (303)
+..+ .=+.|+|..|..|+.-
T Consensus 160 ~Fp~-~~~~V~P~~G~al~f~ 179 (216)
T 3itq_A 160 FFPK-LNLSVHPRKGMAVYFE 179 (216)
T ss_dssp EETT-TTEEECCCTTCEEEEE
T ss_pred EecC-CCCEEecCCCeEEEEe
Confidence 3332 1278999999988754
No 9
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=50.27 E-value=16 Score=20.76 Aligned_cols=18 Identities=33% Similarity=0.521 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHhhcCeEE
Q 039774 99 PTIVEKIACASRELGFFQ 116 (303)
Q Consensus 99 ~~~~~~l~~A~~~~GFF~ 116 (303)
..+++.|.-.|.+-|||+
T Consensus 9 s~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHhccCcccc
Confidence 467889999999999998
No 10
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=49.81 E-value=46 Score=29.75 Aligned_cols=43 Identities=19% Similarity=0.030 Sum_probs=34.7
Q ss_pred ChHHHHHHHHHHHhhcCeEEEEcCCCC----HHHHHHHHHHHHHHhC
Q 039774 97 LRPTIVEKIACASRELGFFQVVNHGIG----VEVLERMVRAIKGFHE 139 (303)
Q Consensus 97 ~r~~~~~~l~~A~~~~GFF~v~nHGi~----~~l~~~~~~~~~~FF~ 139 (303)
..+++.+++++.++.-||..=.+|||+ .+-+..+.+++++||+
T Consensus 302 ~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 302 PVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 456677778888888888766789975 6889999999999985
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=48.48 E-value=29 Score=28.94 Aligned_cols=15 Identities=27% Similarity=0.441 Sum_probs=12.5
Q ss_pred EEEeccCCCcEEEee
Q 039774 284 WVDVKPVPGALVINI 298 (303)
Q Consensus 284 Wv~V~p~pgalvVNv 298 (303)
-+.|+|..|.+|+.-
T Consensus 170 ~~~V~P~~G~al~f~ 184 (224)
T 2jig_A 170 GLAVKPIKGDALMFY 184 (224)
T ss_dssp SEEECCCTTCEEEEE
T ss_pred ceEEecccCcEEEEE
Confidence 489999999988863
No 12
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.20 E-value=4.3 Score=28.13 Aligned_cols=39 Identities=10% Similarity=-0.093 Sum_probs=33.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhcCCChhhhhhccc
Q 039774 195 CRKEAVEWNHHVKQLGELLFGLLCEGLGLKTDKLKENTF 233 (303)
Q Consensus 195 fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~~~~~~~~~ 233 (303)
-+.+++.|+..-.+-...-+..||+.+||+.+.+...|+
T Consensus 16 ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 16 HMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp HHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 467899999998888888899999999999988776664
No 13
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=42.27 E-value=13 Score=31.16 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=28.7
Q ss_pred CcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCC
Q 039774 83 VVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGI 122 (303)
Q Consensus 83 ~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi 122 (303)
.||++++... ...++++.+.+++.+.-.+.+.|||+
T Consensus 125 ~v~~~~y~~~----g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRP----GSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCT----TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCC----CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999988643 24567888999998888888899995
No 14
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=40.15 E-value=25 Score=22.36 Aligned_cols=24 Identities=13% Similarity=0.147 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHhhcCCChhhh
Q 039774 205 HVKQLGELLFGLLCEGLGLKTDKL 228 (303)
Q Consensus 205 ~~~~l~~~Ll~~la~~Lgl~~~~~ 228 (303)
+-.+|+..|.+++++.||.+++++
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 457789999999999999998754
No 15
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=38.51 E-value=35 Score=22.24 Aligned_cols=40 Identities=13% Similarity=0.319 Sum_probs=29.9
Q ss_pred eeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCCCHHHHHHHHHHHHH
Q 039774 86 TIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKG 136 (303)
Q Consensus 86 vIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~ 136 (303)
++|++.+. +.+|.+.|+.+| +.--|.-.++++++......
T Consensus 7 ~~~l~klk--------V~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~~ 46 (55)
T 2do1_A 7 GVELHKLK--------LAELKQECLARG---LETKGIKQDLIHRLQAYLEE 46 (55)
T ss_dssp CCCTTTSC--------HHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHHH
T ss_pred ccCHHHCc--------HHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHhc
Confidence 45777664 788999999999 44567778898888765443
No 16
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=37.51 E-value=33 Score=22.06 Aligned_cols=24 Identities=17% Similarity=0.167 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHhhcCCChhhh
Q 039774 205 HVKQLGELLFGLLCEGLGLKTDKL 228 (303)
Q Consensus 205 ~~~~l~~~Ll~~la~~Lgl~~~~~ 228 (303)
+-.+|+..|.+++++.||.+++++
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHhCCCcccE
Confidence 446788999999999999998754
No 17
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=37.39 E-value=14 Score=34.06 Aligned_cols=52 Identities=13% Similarity=0.085 Sum_probs=39.8
Q ss_pred CcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCCCHHHHHHHHHHHHHHhCC
Q 039774 83 VVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQ 140 (303)
Q Consensus 83 ~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~l 140 (303)
++|-||++.+. ..++.+.++.+|+.++|+..+.|-.++.+ ...+.++.|-.+
T Consensus 122 ~~~~~~~~~~l---~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVL---RYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHH---HCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHh---cCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 68999997654 12467889999999999999998888753 455667777554
No 18
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=36.66 E-value=20 Score=29.61 Aligned_cols=36 Identities=22% Similarity=0.154 Sum_probs=28.2
Q ss_pred Cccee-eCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCC
Q 039774 83 VVPTI-DLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGI 122 (303)
Q Consensus 83 ~iPvI-Dls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi 122 (303)
.||++ ++... ...++++.+.+++.+.-.+.+.|||+
T Consensus 117 ~ip~~~~y~~~----g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVS----ATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCS----SSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCC----CcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 77543 34567888999998888888999994
No 19
>1y66_A Engrailed homeodomain; protein design, dioxane, de novo protein; 1.65A {Escherichia coli} PDB: 2p6j_A
Probab=35.44 E-value=25 Score=21.57 Aligned_cols=42 Identities=12% Similarity=0.207 Sum_probs=33.3
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCChhhhhhc
Q 039774 190 EVPEICRKEAVEWNHHVKQLGELLFGLLCEGLGLKTDKLKEN 231 (303)
Q Consensus 190 ~~P~~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~~~~~~~ 231 (303)
.|.......+.+|.+.-.++...-+.-.+.-|||....++.+
T Consensus 3 qwseeverklkefvrrhqeitqetlheyaqklglnqqaieqf 44 (52)
T 1y66_A 3 QWSEEVERKLKEFVRRHQEITQETLHEYAQKLGLNQQAIEQF 44 (52)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHH
Confidence 466666678889999999999999988999999976655443
No 20
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=35.27 E-value=20 Score=30.42 Aligned_cols=36 Identities=11% Similarity=0.019 Sum_probs=28.2
Q ss_pred CcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCC
Q 039774 83 VVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGI 122 (303)
Q Consensus 83 ~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi 122 (303)
.||++++... ...++++.+.+++++.-.+.+.|||+
T Consensus 161 ~v~~~~y~~~----g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 161 GISVVEFEKP----GSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp CCEEECCCST----TCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CceEecCCCC----CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 5889988643 34567888999998888888889995
No 21
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=34.92 E-value=19 Score=30.05 Aligned_cols=36 Identities=17% Similarity=0.220 Sum_probs=28.4
Q ss_pred CcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCC
Q 039774 83 VVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGI 122 (303)
Q Consensus 83 ~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi 122 (303)
.||++++... .-.++++.+.+++.+.-.+.+.|||+
T Consensus 122 ~ip~~~y~~~----g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATF----GTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCT----TCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCC----CcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 6899988653 23467888999998888888899995
No 22
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=33.58 E-value=36 Score=21.61 Aligned_cols=25 Identities=8% Similarity=0.125 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhhh
Q 039774 204 HHVKQLGELLFGLLCEGLGLKTDKL 228 (303)
Q Consensus 204 ~~~~~l~~~Ll~~la~~Lgl~~~~~ 228 (303)
++-.+|+..|.+++.+.||++++..
T Consensus 14 e~k~~l~~~i~~~l~~~lg~p~~~v 38 (62)
T 1otf_A 14 EQKETLIRQVSEAMANSLDAPLERV 38 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCcccE
Confidence 3457889999999999999998643
No 23
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=33.56 E-value=37 Score=21.54 Aligned_cols=25 Identities=20% Similarity=0.234 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhhh
Q 039774 204 HHVKQLGELLFGLLCEGLGLKTDKL 228 (303)
Q Consensus 204 ~~~~~l~~~Ll~~la~~Lgl~~~~~ 228 (303)
++-.+|+..|.+++++.||++++.+
T Consensus 14 eqk~~l~~~i~~~l~~~lg~~~~~v 38 (61)
T 2opa_A 14 EQKRNLVEKVTEAVKETTGASEEKI 38 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCcCeE
Confidence 3457889999999999999998643
No 24
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=33.26 E-value=20 Score=33.90 Aligned_cols=53 Identities=8% Similarity=0.108 Sum_probs=38.8
Q ss_pred CCcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCCCHHHHHHHHHHHHHHhC
Q 039774 82 DVVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHE 139 (303)
Q Consensus 82 ~~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~ 139 (303)
.-||.||++.+.++ .+.++.++..++.|++.|.| -||.+...+..+...+|.+
T Consensus 99 ~~iP~i~f~di~~~----~~s~~~~~~ir~rG~vVIRg-vvp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 99 AVWPVLSYADIKAG----HVTAEQREQIKRRGCAVIKG-HFPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CSSCEEEHHHHHHT----CCCHHHHHHHHHHSEEEEET-SSCHHHHHHHHHHHHHHHH
T ss_pred CCcceecHHHhcCC----CCCHHHHHHHHhccEEEECC-CCCHHHHHHHHHHHHHHHH
Confidence 56999999876411 12345667789999997776 4899888888887777764
No 25
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=31.64 E-value=26 Score=29.02 Aligned_cols=35 Identities=14% Similarity=0.250 Sum_probs=27.2
Q ss_pred CcceeeCCCCCCCCChHHHHHHHHHHHhhcC---eEEEEcCCC
Q 039774 83 VVPTIDLSGVDSDDLRPTIVEKIACASRELG---FFQVVNHGI 122 (303)
Q Consensus 83 ~iPvIDls~l~~~~~r~~~~~~l~~A~~~~G---FF~v~nHGi 122 (303)
.||+++.. .+.+++++.+.+++.+.+ .+.+.|||+
T Consensus 139 ~vp~~~~~-----~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNE-----QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCC-----SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCC-----CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 68888763 245678888999998865 788889995
No 26
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=31.10 E-value=23 Score=30.90 Aligned_cols=36 Identities=14% Similarity=-0.016 Sum_probs=28.6
Q ss_pred CcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCC
Q 039774 83 VVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGI 122 (303)
Q Consensus 83 ~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi 122 (303)
.||++++... ...++++.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~----g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP----GTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCS----SSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCC----CCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 5888887542 34578889999999888888999995
No 27
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=30.01 E-value=51 Score=28.34 Aligned_cols=52 Identities=13% Similarity=0.081 Sum_probs=38.0
Q ss_pred CCCcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCCCHHHHHHHHHHHHHHhC
Q 039774 81 SDVVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHE 139 (303)
Q Consensus 81 ~~~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~ 139 (303)
+.+|+-||++... ..+..++|++++.++|+..+.|-.++.+ +..+.++.|-.
T Consensus 15 Gaei~gvdl~~~l----~~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G~ 66 (283)
T 1otj_A 15 GAQISGADLTRPL----SDNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFGE 66 (283)
T ss_dssp CEEEESCCSSSCC----CHHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTSC
T ss_pred eEEEECCCcCccC----CHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 4578888998643 2346789999999999999998887764 44455666643
No 28
>2nys_A AGR_C_3712P; SSPB, stringent starvation protein B, NESG, ATR88, structural genomics, PSI-2, protein structure initiative; 2.70A {Agrobacterium tumefaciens str} SCOP: b.136.1.2
Probab=28.40 E-value=35 Score=27.73 Aligned_cols=62 Identities=13% Similarity=0.131 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhh-h-hhcc-cCCCcee---eeecCCCCCCCCCcccccccccCCceEEEecCCCCCce
Q 039774 204 HHVKQLGELLFGLLCEGLGLKTDK-L-KENT-FLEGRMM---VGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQ 277 (303)
Q Consensus 204 ~~~~~l~~~Ll~~la~~Lgl~~~~-~-~~~~-~~~~~~l---r~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLQ 277 (303)
++|+.+.+++|.-++..=|||.+. | --+. ..++..| ....||. =+||.+|.+-..|+
T Consensus 14 ~AlrgVvr~vL~~va~~g~LPg~HHFyITF~T~~pGV~i~~~L~~~YP~-----------------EMTIVLQhQF~dL~ 76 (176)
T 2nys_A 14 DALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKYAE-----------------QMTIVIQHQFWDMK 76 (176)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCTTCCEEEEEESSSTTCBCCHHHHHHSSS-----------------EEEEEESSSCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCCCccEEEEEEecCCCCccCCHHHHhhCCC-----------------ceEEEEEeeecCcE
Confidence 578889999999999866687642 2 2211 1112111 1245664 49999999999999
Q ss_pred EEeCC
Q 039774 278 IKHGE 282 (303)
Q Consensus 278 V~~~g 282 (303)
|..+|
T Consensus 77 V~e~~ 81 (176)
T 2nys_A 77 VTETG 81 (176)
T ss_dssp ECSSE
T ss_pred EecCc
Confidence 97653
No 29
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=28.01 E-value=51 Score=21.41 Aligned_cols=25 Identities=32% Similarity=0.418 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhhh
Q 039774 204 HHVKQLGELLFGLLCEGLGLKTDKL 228 (303)
Q Consensus 204 ~~~~~l~~~Ll~~la~~Lgl~~~~~ 228 (303)
++-++|+..|.+++.+.||++++..
T Consensus 14 eqk~~L~~~it~~~~~~lg~p~~~v 38 (65)
T 3ry0_A 14 QEVAALGEALTAAAHETLGTPVEAV 38 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCcccE
Confidence 4567889999999999999998643
No 30
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=27.68 E-value=71 Score=27.23 Aligned_cols=161 Identities=17% Similarity=0.156 Sum_probs=82.5
Q ss_pred HHHHHHHHHhhcCeEEEEcCCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCceeeccccccccccCCCcccceeee
Q 039774 101 IVEKIACASRELGFFQVVNHGIGVEVLERMVRAIKGFHEQPPEIKAPVYRRENTKGVSYISNIDLFHSKAASWRDTLQIR 180 (303)
Q Consensus 101 ~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~gY~~~~~~~~~~~~d~~e~~~~~ 180 (303)
..+.|..++.+.|++++ ..-+++++++.+.+.++.+-+. .+.+ . ...|- ... ....+.+..-...
T Consensus 15 ~~~~i~~~L~~~g~~Vi-d~fLs~ee~~~L~~~~~~~~~~---g~~~----~--a~i~~-~~~----~~~~~iR~d~i~w 79 (247)
T 2hbt_A 15 ALEYIVPCMNKHGICVV-DDFLGKETGQQIGDEVRALHDT---GKFT----D--GQLVS-QKS----DSSKDIRGDKITW 79 (247)
T ss_dssp HHHTHHHHHHHTSEEEE-SSSSCHHHHHHHHHHHHHHHHT---TCSC----S--CCEEE-CCS----SSTTCEECCEEEE
T ss_pred hHHHHHHHhccCCEEEE-CCCCCHHHHHHHHHHHHhhhhc---CCcc----c--ccccc-ccc----cccccccccceee
Confidence 35678889999998775 4569999999999988875311 1111 0 01110 000 0001111111111
Q ss_pred ccCCCCCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCChhhhhhcccCCCceeeeecCCCCCCCCCcccccccc
Q 039774 181 LGLTEPELEEVPEICRKEAVEWNHHVKQLGELLFGLLCEGLGLKTDKLKENTFLEGRMMVGHYYPYCPQPDLTVGITSHT 260 (303)
Q Consensus 181 ~~p~~~~p~~~P~~fr~~~~~y~~~~~~l~~~Ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~g~~~Ht 260 (303)
..+.. + ..+.+..|.+.|.++.. .+...||+.. +. . ..-+.+.+|++. .-....|.
T Consensus 80 l~~~~------~--~~~~~~~l~~~i~~l~~----~ln~~lGl~~--i~---~--~~e~~~~~Y~~~-----G~~y~~H~ 135 (247)
T 2hbt_A 80 IEGKE------P--GCETIGLLMSSMDDLIR----HCNGKLGSYK--IN---G--RTKAMVACYPGN-----GTGYVRHV 135 (247)
T ss_dssp ECSCS------T--TCHHHHHHHHHHHHHHH----HTTTTSTTCC--EE---E--ECCEEEEEECSS-----SCCEEEEC
T ss_pred ecccc------c--chhHHHHHHHHHHHHHH----HHhhhcCccc--cc---c--cceEEEEEecCC-----CCcccccc
Confidence 11110 1 01223345555544433 2333344321 00 0 112456778751 12356777
Q ss_pred cCC-----ceEEEec--CC------CCCceEEeCC--eEEEeccCCCcEEEeeCc
Q 039774 261 DPG-----PLTILLQ--DD------KGGLQIKHGE--EWVDVKPVPGALVINIGD 300 (303)
Q Consensus 261 D~g-----~lTlL~q--d~------~~GLQV~~~g--~Wv~V~p~pgalvVNvGD 300 (303)
|.. .+|+++. ++ .|-|.+...+ ....|.|..|.+|+.-.+
T Consensus 136 D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~ 190 (247)
T 2hbt_A 136 DNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD 190 (247)
T ss_dssp SSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS
T ss_pred cCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC
Confidence 762 6888875 21 3346777654 678999999999998765
No 31
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=26.95 E-value=46 Score=18.25 Aligned_cols=13 Identities=23% Similarity=0.427 Sum_probs=10.5
Q ss_pred ceEEeCCeEEEec
Q 039774 276 LQIKHGEEWVDVK 288 (303)
Q Consensus 276 LQV~~~g~Wv~V~ 288 (303)
..|+++|.|+...
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 5688999999764
No 32
>2qas_A SSPB, hypothetical protein; SSPB, adaptor, CLPX, unknown function, hydrolase activator; 2.55A {Caulobacter vibrioides} PDB: 2qaz_A
Probab=26.61 E-value=33 Score=27.38 Aligned_cols=62 Identities=18% Similarity=0.067 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhh-h-hhcc-cCCCcee---eeecCCCCCCCCCcccccccccCCceEEEecCCCCCce
Q 039774 204 HHVKQLGELLFGLLCEGLGLKTDK-L-KENT-FLEGRMM---VGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQ 277 (303)
Q Consensus 204 ~~~~~l~~~Ll~~la~~Lgl~~~~-~-~~~~-~~~~~~l---r~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLQ 277 (303)
++|+.+.+++|.-++..=||+.+. | --+. ..++..+ ....||. =+||.+|.+-..|+
T Consensus 22 ~AlrgVvr~vL~~va~~g~LPg~HHFyITF~T~~pGV~i~d~L~~~YP~-----------------EMTIVLQhQF~dL~ 84 (157)
T 2qas_A 22 DALRGVVKAALKKAAAPGGLPEPHHLYITFKTKAAGVSGPQDLLSKYPD-----------------EMTIVLQHQYWDLA 84 (157)
T ss_dssp HHHHHHHHHHHHHHSSTTCSCTTCCEEEEEETTSTTCBCCHHHHHHSSS-----------------EEEEEESSSCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCCCccEEEEEEecCCCCccCCHHHHhhCCC-----------------ceEEEEEeeecCcE
Confidence 578888899998888865587542 2 1111 1112111 1245654 49999999999999
Q ss_pred EEeCC
Q 039774 278 IKHGE 282 (303)
Q Consensus 278 V~~~g 282 (303)
|..++
T Consensus 85 V~e~~ 89 (157)
T 2qas_A 85 PGETF 89 (157)
T ss_dssp ECSSE
T ss_pred EecCc
Confidence 97653
No 33
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=26.35 E-value=35 Score=29.78 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=28.9
Q ss_pred CcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCCC
Q 039774 83 VVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHGI 122 (303)
Q Consensus 83 ~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHGi 122 (303)
.||++|+..+. ...++.+.|.+++.+.-.+.|.|||+
T Consensus 156 ~v~~~~y~~~~---~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIA---LDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSS---CCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCC---CCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 58888886532 24567888999999988999999995
No 34
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=25.81 E-value=97 Score=26.19 Aligned_cols=58 Identities=16% Similarity=0.211 Sum_probs=35.0
Q ss_pred eeeeecCCCCCCCCCcccccccccCC--------ceEEEecCCCCCceEEeC-----------CeEEEeccCCCcEEEee
Q 039774 238 MMVGHYYPYCPQPDLTVGITSHTDPG--------PLTILLQDDKGGLQIKHG-----------EEWVDVKPVPGALVINI 298 (303)
Q Consensus 238 ~lr~~~YP~~~~~~~~~g~~~HtD~g--------~lTlL~qd~~~GLQV~~~-----------g~Wv~V~p~pgalvVNv 298 (303)
...+|+|++- .-++++|.|-. +.||=+-.. .=+.+... +..+.+.-.+|.++|.-
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 3568999863 23688888842 223322211 12333321 36888888999999988
Q ss_pred Ccc
Q 039774 299 GDI 301 (303)
Q Consensus 299 GD~ 301 (303)
|+.
T Consensus 201 G~~ 203 (238)
T 2iuw_A 201 GAT 203 (238)
T ss_dssp ETH
T ss_pred hhh
Confidence 863
No 35
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=25.78 E-value=78 Score=27.79 Aligned_cols=53 Identities=15% Similarity=0.062 Sum_probs=39.4
Q ss_pred CCCcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcC-CCCHHHHHHHHHHHHHHhCC
Q 039774 81 SDVVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNH-GIGVEVLERMVRAIKGFHEQ 140 (303)
Q Consensus 81 ~~~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nH-Gi~~~l~~~~~~~~~~FF~l 140 (303)
+.+|+=|||+... .++..++|++|+.++|+..+.|- .++.+ +..+.++.|=.+
T Consensus 19 Gaei~gvdl~~~L----~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 19 GARVDGVRLGGDL----DDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp CEEEESCCCSTTC----CHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred cceEeCCCccccC----CHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 4678888998422 24567899999999999999987 78774 445667777544
No 36
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=25.72 E-value=59 Score=21.27 Aligned_cols=25 Identities=20% Similarity=0.167 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhhh
Q 039774 204 HHVKQLGELLFGLLCEGLGLKTDKL 228 (303)
Q Consensus 204 ~~~~~l~~~Ll~~la~~Lgl~~~~~ 228 (303)
++-.+|+..|.+++++.||++++..
T Consensus 17 eqK~~l~~~lt~~l~~~lg~p~~~v 41 (67)
T 3m21_A 17 EQKQQLIEGVSDLMVKVLNKNKASI 41 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHCcCcccE
Confidence 3557888999999999999987643
No 37
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=25.65 E-value=67 Score=27.90 Aligned_cols=52 Identities=15% Similarity=0.014 Sum_probs=38.3
Q ss_pred CCCcceeeCCCCCCCCChHHHHHHHHHHHhhcCeEEEEcCC-CCHHHHHHHHHHHHHHhC
Q 039774 81 SDVVPTIDLSGVDSDDLRPTIVEKIACASRELGFFQVVNHG-IGVEVLERMVRAIKGFHE 139 (303)
Q Consensus 81 ~~~iPvIDls~l~~~~~r~~~~~~l~~A~~~~GFF~v~nHG-i~~~l~~~~~~~~~~FF~ 139 (303)
+.+|+-|||+.+. ..+..++|++++.++|+..+.|-. ++. ++..+.++.|-.
T Consensus 25 Gaei~gvdl~~~l----~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 25 GAEIRGVKLSPDL----DAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp CEEEESCCCCTTC----CHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred ceEEeCCCccccC----CHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 4568888988643 234678999999999999998877 775 455566666654
No 38
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=25.22 E-value=52 Score=21.23 Aligned_cols=25 Identities=16% Similarity=0.228 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhhh
Q 039774 204 HHVKQLGELLFGLLCEGLGLKTDKL 228 (303)
Q Consensus 204 ~~~~~l~~~Ll~~la~~Lgl~~~~~ 228 (303)
++-.+|+..|.+++++.||++++.+
T Consensus 13 eqK~~L~~~it~~~~~~lg~~~~~v 37 (62)
T 3m20_A 13 GKKREFVERLTSVAAEIYGMDRSAI 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSC
T ss_pred HHHHHHHHHHHHHHHHHhCcCcceE
Confidence 3457889999999999999987643
No 39
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=24.90 E-value=76 Score=28.66 Aligned_cols=57 Identities=23% Similarity=0.224 Sum_probs=37.2
Q ss_pred eeeeecCCCCCCCCCcccccccccCC------ceEEEecCCCCCceEEeC-CeEEEeccCCCcEEEeeCcc
Q 039774 238 MMVGHYYPYCPQPDLTVGITSHTDPG------PLTILLQDDKGGLQIKHG-EEWVDVKPVPGALVINIGDI 301 (303)
Q Consensus 238 ~lr~~~YP~~~~~~~~~g~~~HtD~g------~lTlL~qd~~~GLQV~~~-g~Wv~V~p~pgalvVNvGD~ 301 (303)
...+|+|.+- . ++++|.|-. ++||=+- ...=+.+... |.++.+.-.+|+++|.-|+.
T Consensus 199 ~~lvN~Y~~G-----~-~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~ 262 (345)
T 3tht_A 199 QMTINQYEPG-----Q-GIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGES 262 (345)
T ss_dssp EEEEEEECTT-----C-CEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHH
T ss_pred EEEEEEecCC-----C-CEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHH
Confidence 4568999762 2 789999984 2233221 1122444443 67899999999999998863
No 40
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=24.27 E-value=63 Score=21.83 Aligned_cols=25 Identities=12% Similarity=0.171 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhhh
Q 039774 204 HHVKQLGELLFGLLCEGLGLKTDKL 228 (303)
Q Consensus 204 ~~~~~l~~~Ll~~la~~Lgl~~~~~ 228 (303)
++-++|+..|.+++++.||++++.+
T Consensus 15 eqk~~L~~~l~~~l~~~lgip~~~v 39 (76)
T 1gyx_A 15 QQKAALAADITDVIIRHLNSKDSSI 39 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCcCCceE
Confidence 3557889999999999999998754
No 41
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=24.13 E-value=62 Score=21.54 Aligned_cols=25 Identities=8% Similarity=0.134 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhhh
Q 039774 204 HHVKQLGELLFGLLCEGLGLKTDKL 228 (303)
Q Consensus 204 ~~~~~l~~~Ll~~la~~Lgl~~~~~ 228 (303)
++-.+|...|.+++++.||++++.+
T Consensus 15 eqK~~L~~~it~~l~~~lg~p~~~v 39 (72)
T 3mb2_A 15 EQKAELARALSAAAAAAFDVPLAEV 39 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccE
Confidence 3557889999999999999998654
No 42
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=24.12 E-value=1.5e+02 Score=23.78 Aligned_cols=40 Identities=13% Similarity=0.228 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHhhcCeEEEEcC-CCCHHHHHHHHHHHHHH
Q 039774 98 RPTIVEKIACASRELGFFQVVNH-GIGVEVLERMVRAIKGF 137 (303)
Q Consensus 98 r~~~~~~l~~A~~~~GFF~v~nH-Gi~~~l~~~~~~~~~~F 137 (303)
..+.+++|.+.+++...++|+++ |++.+.+.++....++-
T Consensus 8 K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~~ 48 (180)
T 1zav_A 8 KELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREK 48 (180)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 45677888888888888888764 78887777777766643
No 43
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=23.58 E-value=45 Score=24.11 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=24.5
Q ss_pred HHHHHHHHHhhcCCChhhhhhcc-cCCCceeee
Q 039774 210 GELLFGLLCEGLGLKTDKLKENT-FLEGRMMVG 241 (303)
Q Consensus 210 ~~~Ll~~la~~Lgl~~~~~~~~~-~~~~~~lr~ 241 (303)
+.+|++.+|+-|+++..+|.+.- ..+...+|+
T Consensus 19 G~~l~~~la~ll~l~~~~Ft~i~V~g~aVTFrV 51 (91)
T 2qt7_A 19 GVKLLEILAEHVHMSSGSFINISVVGPALTFRI 51 (91)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHhcCCccceeeeEeecceEEEEe
Confidence 67899999999999999998752 334445555
No 44
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=23.28 E-value=1.5e+02 Score=23.61 Aligned_cols=39 Identities=15% Similarity=0.223 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHhhcC-eEEEEc-CCCCHHHHHHHHHHHHH
Q 039774 98 RPTIVEKIACASRELG-FFQVVN-HGIGVEVLERMVRAIKG 136 (303)
Q Consensus 98 r~~~~~~l~~A~~~~G-FF~v~n-HGi~~~l~~~~~~~~~~ 136 (303)
..+.+++|.+.+++.. .++|++ +|++.+.+.++....++
T Consensus 6 K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~ 46 (173)
T 2j01_J 6 NVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQ 46 (173)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4567778888888887 666665 47887777766665543
No 45
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=22.55 E-value=78 Score=26.40 Aligned_cols=57 Identities=14% Similarity=0.099 Sum_probs=36.0
Q ss_pred eeeeecCCCCCCCCCcccccccccC-----C--ceEEEecCCCCCceEEe---CCeEEEeccCCCcEEEeeCcc
Q 039774 238 MMVGHYYPYCPQPDLTVGITSHTDP-----G--PLTILLQDDKGGLQIKH---GEEWVDVKPVPGALVINIGDI 301 (303)
Q Consensus 238 ~lr~~~YP~~~~~~~~~g~~~HtD~-----g--~lTlL~qd~~~GLQV~~---~g~Wv~V~p~pgalvVNvGD~ 301 (303)
...+|+|.+. . +++.|.|- + +++|=+- ...=+.+.+ .+.++.+.-.+|.++|.-|+.
T Consensus 106 ~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~ 172 (211)
T 3i3q_A 106 ACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES 172 (211)
T ss_dssp EEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGG
T ss_pred EEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchH
Confidence 3568999762 3 78999992 2 2233232 112244432 256888989999999998864
No 46
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=21.56 E-value=91 Score=26.03 Aligned_cols=38 Identities=11% Similarity=0.163 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHhhcCeEEEEc-CCCCHHHHHHHHHHHH
Q 039774 98 RPTIVEKIACASRELGFFQVVN-HGIGVEVLERMVRAIK 135 (303)
Q Consensus 98 r~~~~~~l~~A~~~~GFF~v~n-HGi~~~l~~~~~~~~~ 135 (303)
..+.+++|.+.++++..++|++ +|++.+.++++.+..|
T Consensus 5 K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr 43 (213)
T 3jsy_A 5 KIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIR 43 (213)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 4556777777777777666665 5777776666666554
No 47
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=20.15 E-value=1.3e+02 Score=25.68 Aligned_cols=41 Identities=17% Similarity=0.153 Sum_probs=31.8
Q ss_pred CCChHHHHHHHHHHHhhcCeEEEEcC-CCCHHHHHHHHHHHHH
Q 039774 95 DDLRPTIVEKIACASRELGFFQVVNH-GIGVEVLERMVRAIKG 136 (303)
Q Consensus 95 ~~~r~~~~~~l~~A~~~~GFF~v~nH-Gi~~~l~~~~~~~~~~ 136 (303)
+..+.++.+.+.+||-+.|| .+--. ||+.+-+.++.+.+.+
T Consensus 169 Gl~~l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l~ 210 (249)
T 3m0z_A 169 GLKHRAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIALD 210 (249)
T ss_dssp TTTTHHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHHH
Confidence 34577889999999999999 55544 6998877777776643
Done!