BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039778
(459 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 148/317 (46%), Gaps = 19/317 (5%)
Query: 149 SLKTLYLKSNNFAKTVTTTQGLCELVH--LQDLYIDRNDFIGSLPWCLANLTSLRVLHVP 206
SL TL L SNNF+ + LC+ LQ+LY+ N F G +P L+N + L LH+
Sbjct: 366 SLLTLDLSSNNFSGPILPN--LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 423
Query: 207 DNQLTGNLSSSPLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFHANNSLSGPFRLP 266
N L+G + SS L L+ + L L N + I E + + + N L+G
Sbjct: 424 FNYLSGTIPSS-LGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 482
Query: 267 TRSRKNIIALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPSSFGDMNSLIYLD 326
+ N+ + +S N+L G IP IG+ L NL L ++ N+F+G+IP+ GD SLI+LD
Sbjct: 483 LSNCTNLNWISLSNNRLTGEIPKWIGR-LENLAILKLSNNSFSGNIPAELGDCRSLIWLD 541
Query: 327 LSNNQLTGEIPEHLAMGCFNLEYXXXXXXXXXXXXFSXXXXXXXXXXXXXDGN--HFIGD 384
L+ N G IP + + + GN F G
Sbjct: 542 LNTNLFNGTIPAAMFK-----QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGI 596
Query: 385 IPESLSNCSSLQGLYISDNDITG-SIPTWI--GNISFLDAIIMPDNHLEGPIPSEFCQLD 441
E L+ S+ I+ G + PT+ G++ FLD M N L G IP E +
Sbjct: 597 RSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD---MSYNMLSGYIPKEIGSMP 653
Query: 442 YLEILDLSKNNIAGSLP 458
YL IL+L N+I+GS+P
Sbjct: 654 YLFILNLGHNDISGSIP 670
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 144/316 (45%), Gaps = 34/316 (10%)
Query: 149 SLKTLYLKSNNFAKTVTT-TQGLCELVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPD 207
SL+ L L N F + G C+ L L + N F G++P + + L L +
Sbjct: 267 SLQYLSLAENKFTGEIPDFLSGACD--TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 324
Query: 208 NQLTGNLSSSPLMHLTSIEVLLLSNNHF--QIPISLEPFFNYSKLKIFHANNSLSGPF-- 263
N +G L L+ + ++VL LS N F ++P SL + S L + ++N+ SGP
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL-SASLLTLDLSSNNFSGPILP 383
Query: 264 RLPTRSRKNIIALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPSSFGDMNSLI 323
L + + L + N G IP + L L ++FN +G+IPSS G ++ L
Sbjct: 384 NLCQNPKNTLQELYLQNNGFTGKIPPTLSNC-SELVSLHLSFNYLSGTIPSSLGSLSKLR 442
Query: 324 YLDLSNNQLTGEIPEHLAMGCFNLEYXXXXXXXXXXXXFSXXXXXXXXXXXXXDGNHFIG 383
L L N L GEIP+ L M LE D N G
Sbjct: 443 DLKLWLNMLEGEIPQEL-MYVKTLE------------------------TLILDFNDLTG 477
Query: 384 DIPESLSNCSSLQGLYISDNDITGSIPTWIGNISFLDAIIMPDNHLEGPIPSEFCQLDYL 443
+IP LSNC++L + +S+N +TG IP WIG + L + + +N G IP+E L
Sbjct: 478 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 537
Query: 444 EILDLSKNNIAGSLPS 459
LDL+ N G++P+
Sbjct: 538 IWLDLNTNLFNGTIPA 553
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 152/341 (44%), Gaps = 15/341 (4%)
Query: 124 LRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCELVHLQDLYIDR 183
L FLD+S G L G +L+ L + N + + C L+ L I
Sbjct: 199 LEFLDVSSNNFSTGIPFL---GDCSALQHLDISGNKLSGDFSRAISTC--TELKLLNISS 253
Query: 184 NDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNHFQIPISLEP 243
N F+G +P L SL+ L + +N+ TG + ++ L LS NHF + P
Sbjct: 254 NQFVGPIP--PLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAV--PP 309
Query: 244 FFNYSKLKIFHAN--NSLSGPFRLPTRSR-KNIIALDISYNKLQGHIPVEIGKVLPNLGF 300
FF L A N+ SG + T + + + LD+S+N+ G +P + + +L
Sbjct: 310 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 369
Query: 301 LSITFNAFNGSIPSSFGD--MNSLIYLDLSNNQLTGEIPEHLAMGCFNLEYXXXXXXXXX 358
L ++ N F+G I + N+L L L NN TG+IP L+ C L
Sbjct: 370 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS-NCSELVSLHLSFNYLS 428
Query: 359 XXXFSXXXXXXXXXXXXXDGNHFIGDIPESLSNCSSLQGLYISDNDITGSIPTWIGNISF 418
S N G+IP+ L +L+ L + ND+TG IP+ + N +
Sbjct: 429 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 488
Query: 419 LDAIIMPDNHLEGPIPSEFCQLDYLEILDLSKNNIAGSLPS 459
L+ I + +N L G IP +L+ L IL LS N+ +G++P+
Sbjct: 489 LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 529
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 154/374 (41%), Gaps = 43/374 (11%)
Query: 118 YRGLRKLRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCELVHLQ 177
++ L LDLS + L S+GS LK L + SN + GL +L L+
Sbjct: 93 FKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLE 151
Query: 178 DLYIDRNDFIGS--LPWCLAN-LTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNH 234
L + N G+ + W L++ L+ L + N+++G++ S ++L E L +S+N+
Sbjct: 152 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNL---EFLDVSSNN 208
Query: 235 FQIPISLEPFF-NYSKLKIFH-ANNSLSGPFRLPTRSRKNIIALDISYNKLQGHIPVEIG 292
F I PF + S L+ + N LSG F + + L+IS N+ G IP
Sbjct: 209 FSTGI---PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--- 262
Query: 293 KVLPNLGFLSITFNAFNGSIPSSF-GDMNSLIYLDLSNNQLTGEIPEHLAMGCFNLEYXX 351
L +L +LS+ N F G IP G ++L LDLS N G +P
Sbjct: 263 LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLAL 322
Query: 352 XXXXXXXXXXFSXXXXXXXXXXXXXDGNHFIGDIPESLSNCSS----------------- 394
N F G++PESL+N S+
Sbjct: 323 SSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL 382
Query: 395 ----------LQGLYISDNDITGSIPTWIGNISFLDAIIMPDNHLEGPIPSEFCQLDYLE 444
LQ LY+ +N TG IP + N S L ++ + N+L G IPS L L
Sbjct: 383 PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLR 442
Query: 445 ILDLSKNNIAGSLP 458
L L N + G +P
Sbjct: 443 DLKLWLNMLEGEIP 456
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 52/275 (18%)
Query: 113 VVPKDYRGLRKLRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCE 172
+P L KLR L L L + +G ++ + +L+TL L N+ + + GL
Sbjct: 430 TIPSSLGSLSKLRDLKL-WLNMLEG-EIPQELMYVKTLETLILDFNDLTGEIPS--GLSN 485
Query: 173 LVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSN 232
+L + + N G +P + L +L +L + +N +GN+ + L S+ L L+
Sbjct: 486 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE-LGDCRSLIWLDLNT 544
Query: 233 NHFQIPISLEPF---------FNYSKLKIFHANNSLSGPF------------------RL 265
N F I F F K ++ N+ + RL
Sbjct: 545 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 604
Query: 266 PTRSRKNIIA-------------------LDISYNKLQGHIPVEIGKVLPNLGFLSITFN 306
TR+ NI + LD+SYN L G+IP EIG +P L L++ N
Sbjct: 605 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHN 663
Query: 307 AFNGSIPSSFGDMNSLIYLDLSNNQLTGEIPEHLA 341
+GSIP GD+ L LDLS+N+L G IP+ ++
Sbjct: 664 DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 698
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 254 HANNSLSGPFRLPTRSRKNIIALDISYNKLQGHIPV--EIGKVLPNLGFLSITFNA--FN 309
H N S+SG + ++ +LD+S N L G + +G L FL+++ N F
Sbjct: 85 HINGSVSG-----FKCSASLTSLDLSRNSLSGPVTTLTSLGSC-SGLKFLNVSSNTLDFP 138
Query: 310 GSIPSSFGDMNSLIYLDLSNNQLTGE--IPEHLAMGCFNLEYXXXXXXXXXXXXFSXXXX 367
G + +NSL LDLS N ++G + L+ GC L++
Sbjct: 139 GKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAI--------------- 182
Query: 368 XXXXXXXXXDGNHFIGDIPESLSNCSSLQGLYISDNDITGSIPTWIGNISFLDAIIMPDN 427
GN GD+ +S C +L+ L +S N+ + IP ++G+ S L + + N
Sbjct: 183 ---------SGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGN 230
Query: 428 HLEGPIPSEFCQLDYLEILDLSKNNIAGSLP 458
L G L++L++S N G +P
Sbjct: 231 KLSGDFSRAISTCTELKLLNISSNQFVGPIP 261
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 179 LYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNL--SSSPLMHLTSIEVLLLSNNHFQ 236
L + ND GS+P + +L L +L + N+L G + + S L LT I+ LSNN+
Sbjct: 658 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID---LSNNNLS 714
Query: 237 IPI 239
PI
Sbjct: 715 GPI 717
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 148/317 (46%), Gaps = 19/317 (5%)
Query: 149 SLKTLYLKSNNFAKTVTTTQGLCELVH--LQDLYIDRNDFIGSLPWCLANLTSLRVLHVP 206
SL TL L SNNF+ + LC+ LQ+LY+ N F G +P L+N + L LH+
Sbjct: 369 SLLTLDLSSNNFSGPILPN--LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426
Query: 207 DNQLTGNLSSSPLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFHANNSLSGPFRLP 266
N L+G + SS L L+ + L L N + I E + + + N L+G
Sbjct: 427 FNYLSGTIPSS-LGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 485
Query: 267 TRSRKNIIALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPSSFGDMNSLIYLD 326
+ N+ + +S N+L G IP IG+ L NL L ++ N+F+G+IP+ GD SLI+LD
Sbjct: 486 LSNCTNLNWISLSNNRLTGEIPKWIGR-LENLAILKLSNNSFSGNIPAELGDCRSLIWLD 544
Query: 327 LSNNQLTGEIPEHLAMGCFNLEYXXXXXXXXXXXXFSXXXXXXXXXXXXXDGN--HFIGD 384
L+ N G IP + + + GN F G
Sbjct: 545 LNTNLFNGTIPAAMFK-----QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGI 599
Query: 385 IPESLSNCSSLQGLYISDNDITG-SIPTWI--GNISFLDAIIMPDNHLEGPIPSEFCQLD 441
E L+ S+ I+ G + PT+ G++ FLD M N L G IP E +
Sbjct: 600 RSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD---MSYNMLSGYIPKEIGSMP 656
Query: 442 YLEILDLSKNNIAGSLP 458
YL IL+L N+I+GS+P
Sbjct: 657 YLFILNLGHNDISGSIP 673
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 144/316 (45%), Gaps = 34/316 (10%)
Query: 149 SLKTLYLKSNNFAKTVTT-TQGLCELVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPD 207
SL+ L L N F + G C+ L L + N F G++P + + L L +
Sbjct: 270 SLQYLSLAENKFTGEIPDFLSGACD--TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 327
Query: 208 NQLTGNLSSSPLMHLTSIEVLLLSNNHF--QIPISLEPFFNYSKLKIFHANNSLSGPF-- 263
N +G L L+ + ++VL LS N F ++P SL + S L + ++N+ SGP
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL-SASLLTLDLSSNNFSGPILP 386
Query: 264 RLPTRSRKNIIALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPSSFGDMNSLI 323
L + + L + N G IP + L L ++FN +G+IPSS G ++ L
Sbjct: 387 NLCQNPKNTLQELYLQNNGFTGKIPPTLSNC-SELVSLHLSFNYLSGTIPSSLGSLSKLR 445
Query: 324 YLDLSNNQLTGEIPEHLAMGCFNLEYXXXXXXXXXXXXFSXXXXXXXXXXXXXDGNHFIG 383
L L N L GEIP+ L M LE D N G
Sbjct: 446 DLKLWLNMLEGEIPQEL-MYVKTLE------------------------TLILDFNDLTG 480
Query: 384 DIPESLSNCSSLQGLYISDNDITGSIPTWIGNISFLDAIIMPDNHLEGPIPSEFCQLDYL 443
+IP LSNC++L + +S+N +TG IP WIG + L + + +N G IP+E L
Sbjct: 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 540
Query: 444 EILDLSKNNIAGSLPS 459
LDL+ N G++P+
Sbjct: 541 IWLDLNTNLFNGTIPA 556
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 152/341 (44%), Gaps = 15/341 (4%)
Query: 124 LRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCELVHLQDLYIDR 183
L FLD+S G L G +L+ L + N + + C L+ L I
Sbjct: 202 LEFLDVSSNNFSTGIPFL---GDCSALQHLDISGNKLSGDFSRAISTC--TELKLLNISS 256
Query: 184 NDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNHFQIPISLEP 243
N F+G +P L SL+ L + +N+ TG + ++ L LS NHF + P
Sbjct: 257 NQFVGPIP--PLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAV--PP 312
Query: 244 FFNYSKLKIFHAN--NSLSGPFRLPTRSR-KNIIALDISYNKLQGHIPVEIGKVLPNLGF 300
FF L A N+ SG + T + + + LD+S+N+ G +P + + +L
Sbjct: 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 372
Query: 301 LSITFNAFNGSIPSSFGD--MNSLIYLDLSNNQLTGEIPEHLAMGCFNLEYXXXXXXXXX 358
L ++ N F+G I + N+L L L NN TG+IP L+ C L
Sbjct: 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS-NCSELVSLHLSFNYLS 431
Query: 359 XXXFSXXXXXXXXXXXXXDGNHFIGDIPESLSNCSSLQGLYISDNDITGSIPTWIGNISF 418
S N G+IP+ L +L+ L + ND+TG IP+ + N +
Sbjct: 432 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 491
Query: 419 LDAIIMPDNHLEGPIPSEFCQLDYLEILDLSKNNIAGSLPS 459
L+ I + +N L G IP +L+ L IL LS N+ +G++P+
Sbjct: 492 LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 532
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 154/374 (41%), Gaps = 43/374 (11%)
Query: 118 YRGLRKLRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCELVHLQ 177
++ L LDLS + L S+GS LK L + SN + GL +L L+
Sbjct: 96 FKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLE 154
Query: 178 DLYIDRNDFIGS--LPWCLAN-LTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNH 234
L + N G+ + W L++ L+ L + N+++G++ S ++L E L +S+N+
Sbjct: 155 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNL---EFLDVSSNN 211
Query: 235 FQIPISLEPFF-NYSKLKIFH-ANNSLSGPFRLPTRSRKNIIALDISYNKLQGHIPVEIG 292
F I PF + S L+ + N LSG F + + L+IS N+ G IP
Sbjct: 212 FSTGI---PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--- 265
Query: 293 KVLPNLGFLSITFNAFNGSIPSSF-GDMNSLIYLDLSNNQLTGEIPEHLAMGCFNLEYXX 351
L +L +LS+ N F G IP G ++L LDLS N G +P
Sbjct: 266 LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLAL 325
Query: 352 XXXXXXXXXXFSXXXXXXXXXXXXXDGNHFIGDIPESLSNCSS----------------- 394
N F G++PESL+N S+
Sbjct: 326 SSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL 385
Query: 395 ----------LQGLYISDNDITGSIPTWIGNISFLDAIIMPDNHLEGPIPSEFCQLDYLE 444
LQ LY+ +N TG IP + N S L ++ + N+L G IPS L L
Sbjct: 386 PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLR 445
Query: 445 ILDLSKNNIAGSLP 458
L L N + G +P
Sbjct: 446 DLKLWLNMLEGEIP 459
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 52/275 (18%)
Query: 113 VVPKDYRGLRKLRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCE 172
+P L KLR L L L + +G ++ + +L+TL L N+ + + GL
Sbjct: 433 TIPSSLGSLSKLRDLKL-WLNMLEG-EIPQELMYVKTLETLILDFNDLTGEIPS--GLSN 488
Query: 173 LVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSN 232
+L + + N G +P + L +L +L + +N +GN+ + L S+ L L+
Sbjct: 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE-LGDCRSLIWLDLNT 547
Query: 233 NHFQIPISLEPF---------FNYSKLKIFHANNSLSGPF------------------RL 265
N F I F F K ++ N+ + RL
Sbjct: 548 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 607
Query: 266 PTRSRKNIIA-------------------LDISYNKLQGHIPVEIGKVLPNLGFLSITFN 306
TR+ NI + LD+SYN L G+IP EIG +P L L++ N
Sbjct: 608 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHN 666
Query: 307 AFNGSIPSSFGDMNSLIYLDLSNNQLTGEIPEHLA 341
+GSIP GD+ L LDLS+N+L G IP+ ++
Sbjct: 667 DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 254 HANNSLSGPFRLPTRSRKNIIALDISYNKLQGHIPV--EIGKVLPNLGFLSITFNA--FN 309
H N S+SG + ++ +LD+S N L G + +G L FL+++ N F
Sbjct: 88 HINGSVSG-----FKCSASLTSLDLSRNSLSGPVTTLTSLGSC-SGLKFLNVSSNTLDFP 141
Query: 310 GSIPSSFGDMNSLIYLDLSNNQLTGE--IPEHLAMGCFNLEYXXXXXXXXXXXXFSXXXX 367
G + +NSL LDLS N ++G + L+ GC L++
Sbjct: 142 GKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAI--------------- 185
Query: 368 XXXXXXXXXDGNHFIGDIPESLSNCSSLQGLYISDNDITGSIPTWIGNISFLDAIIMPDN 427
GN GD+ +S C +L+ L +S N+ + IP ++G+ S L + + N
Sbjct: 186 ---------SGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGN 233
Query: 428 HLEGPIPSEFCQLDYLEILDLSKNNIAGSLP 458
L G L++L++S N G +P
Sbjct: 234 KLSGDFSRAISTCTELKLLNISSNQFVGPIP 264
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 179 LYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNL--SSSPLMHLTSIEVLLLSNNHFQ 236
L + ND GS+P + +L L +L + N+L G + + S L LT I+ LSNN+
Sbjct: 661 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID---LSNNNLS 717
Query: 237 IPI 239
PI
Sbjct: 718 GPI 720
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 108/280 (38%), Gaps = 32/280 (11%)
Query: 159 NFAKTVTTTQGLCELVHLQDLYIDR-NDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSS 217
N K L L +L LYI N+ +G +P +A LT L L++ ++G +
Sbjct: 61 NLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD- 119
Query: 218 PLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFHANNSLSGPFRLPTRSRKNIIALD 277
L+ I+ L ++L+ F+Y N+LSG S N++ +
Sbjct: 120 ---FLSQIKTL----------VTLD--FSY---------NALSGTLPPSISSLPNLVGIT 155
Query: 278 ISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQLTGEIP 337
N++ G IP G ++I+ N G IP +F ++N L ++DLS N L G+
Sbjct: 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGD-- 212
Query: 338 EHLAMGCFNLEYXXXXXXXXXXXXFSXXXXXXXXXXXXXDGNHFIGDIPESLSNCSSLQG 397
+ G N G +P+ L+ L
Sbjct: 213 ASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHS 272
Query: 398 LYISDNDITGSIPTWIGNISFLDAIIMPDNH--LEGPIPS 435
L +S N++ G IP GN+ D +N P+P+
Sbjct: 273 LNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGSPLPA 311
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 30/237 (12%)
Query: 127 LDLSGLRIRDGSKVLHSIGSFPSLKTLYLKS-NNFAKTVTTTQGLCELVHLQDLYIDRND 185
LDLSGL + + S+ + P L LY+ NN + + +L L LYI +
Sbjct: 55 LDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPI--PPAIAKLTQLHYLYITHTN 112
Query: 186 FIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNHFQIPISLEPFF 245
G++P L+ + +L L N L+G L S + L ++ + N I + +
Sbjct: 113 VSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS-ISSLPNLVGITFDGNRISGAIP-DSYG 170
Query: 246 NYSKL--KIFHANNSLSGPFRLPTRSRKNIIALDISYNKLQGHIPV-------------- 289
++SKL + + N L+G PT + N+ +D+S N L+G V
Sbjct: 171 SFSKLFTSMTISRNRLTGKIP-PTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229
Query: 290 ------EIGKV--LPNLGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQLTGEIPE 338
++GKV NL L + N G++P + L L++S N L GEIP+
Sbjct: 230 KNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 28/163 (17%)
Query: 295 LPNLGFLSIT-FNAFNGSIPSSFGDMNSLIYLDLSNNQLTGEIPEHLAMGCFNLEYXXXX 353
LP L FL I N G IP + + L YL +++ ++G IP+ L+
Sbjct: 75 LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ----------- 123
Query: 354 XXXXXXXXFSXXXXXXXXXXXXXDGNHFIGDIPESLSNCSSLQGLYISDNDITGSIPTWI 413
FS N G +P S+S+ +L G+ N I+G+IP
Sbjct: 124 IKTLVTLDFSY--------------NALSGTLPPSISSLPNLVGITFDGNRISGAIPDSY 169
Query: 414 GNISFL-DAIIMPDNHLEGPIPSEFCQLDYLEILDLSKNNIAG 455
G+ S L ++ + N L G IP F L+ L +DLS+N + G
Sbjct: 170 GSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEG 211
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 379 NHFIGDIPESLSNCSSLQGLYISDNDITGSIPTWIGNISFLDAIIMPDNHLEGPIPSEFC 438
N+ +G IP +++ + L LYI+ +++G+IP ++ I L + N L G +P
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 439 QLDYLEILDLSKNNIAGSLP 458
L L + N I+G++P
Sbjct: 147 SLPNLVGITFDGNRISGAIP 166
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 37/241 (15%)
Query: 114 VPKDYRGLRKLRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCEL 173
+P G+ L+ L L+ ++ + SFPSL+ LY+K N K T+ L +L
Sbjct: 292 LPSGIEGMNSLKKLVLNANSFDQLCQI--NAASFPSLRDLYIKG-NMRKLDLGTRCLEKL 348
Query: 174 VHLQDLYIDRNDFIGSLPWC---LANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLL 230
+LQ L + +D S C L NL L+ L++ N+ G L +E+L +
Sbjct: 349 ENLQKLDLSHSDIEAS-DCCNLQLKNLRHLQYLNLSYNEPLG-LEDQAFKECPQLELLDV 406
Query: 231 SNNHFQIPISLEPFFNYSKLKIFHANNSLSGPFRLPTRSRKNIIAL-DISYNKLQG---- 285
+ H + PF N L++ + ++ L L T ++ + L D+ + LQG
Sbjct: 407 AFTHLHVKAPHSPFQNLHLLRVLNLSHCL-----LDTSNQHLLAGLQDLRHLNLQGNSFQ 461
Query: 286 -------HIPVEIGK----VLPNLGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQLTG 334
++ +G +L + LSI AF+G + ++ +LDLS+N LTG
Sbjct: 462 DGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHG--------LRNVNHLDLSHNSLTG 513
Query: 335 E 335
+
Sbjct: 514 D 514
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 111/240 (46%), Gaps = 23/240 (9%)
Query: 114 VPKDYRGLRKLRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCE- 172
+P GL L+ L LS + + ++ S +FPSL L +K N K + G E
Sbjct: 293 LPSGLVGLSTLKKLVLSANKFENLCQI--SASNFPSLTHLSIKGN--TKRLELGTGCLEN 348
Query: 173 LVHLQDLYIDRNDFIGSLPWC---LANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLL 229
L +L++L + +D I + C L NL+ L+ L++ N+ +L + +E+L
Sbjct: 349 LENLRELDLSHDD-IETSDCCNLQLRNLSHLQSLNLSYNE-PLSLKTEAFKECPQLELLD 406
Query: 230 LSNNHFQIPISLEPFFNYSKLKIFHANNSLSGPFRLPTRSRKNIIAL-DISYNKLQG-HI 287
L+ ++ + PF N LK+ + ++SL L S + L + + LQG H
Sbjct: 407 LAFTRLKVKDAQSPFQNLHLLKVLNLSHSL-----LDISSEQLFDGLPALQHLNLQGNHF 461
Query: 288 P---VEIGKVLPNLGFLSI---TFNAFNGSIPSSFGDMNSLIYLDLSNNQLTGEIPEHLA 341
P ++ L LG L I +F + +F + + ++DLS+N+LT E L+
Sbjct: 462 PKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALS 521
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 113 VVPKDY-RGLRKLRFLDLS-GLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGL 170
+VP + + L+ L FLDLS L + + K G++PSL+TL L N+ T + L
Sbjct: 324 LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEIL 383
Query: 171 CELVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLL 230
L +L L I RN F +P +R L++ + + P ++EVL +
Sbjct: 384 LTLKNLTSLDISRNTF-HPMPDSCQWPEKMRFLNLSSTGIRVVKTCIP----QTLEVLDV 438
Query: 231 SNNHFQ-----IPISLEPFFNYSKLKIFHANNSLSGPFRLPTRSRKNIIALDISYNKLQG 285
SNN+ +P E + + +KLK +L P ++ + IS N+L+
Sbjct: 439 SNNNLDSFSLFLPRLQELYISRNKLK------TLPDASLFPV-----LLVMKISRNQLKS 487
Query: 286 HIPVEIGKVLPNLGFLSITFNAFNGSIP 313
+P I L +L + + N ++ S P
Sbjct: 488 -VPDGIFDRLTSLQKIWLHTNPWDCSCP 514
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 16/139 (11%)
Query: 119 RGLRKLRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCELVHLQD 178
GL+ ++ LDL+ +I D + + +L+ LYL N +T L L +LQ
Sbjct: 104 AGLQSIKTLDLTSTQITD----VTPLAGLSNLQVLYLDLNQ----ITNISPLAGLTNLQY 155
Query: 179 LYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNHFQIP 238
L I P LANL+ L L DN+++ SPL L ++ + L NN
Sbjct: 156 LSIGNAQVSDLTP--LANLSKLTTLKADDNKIS---DISPLASLPNLIEVHLKNNQIS-- 208
Query: 239 ISLEPFFNYSKLKIFHANN 257
+ P N S L I N
Sbjct: 209 -DVSPLANTSNLFIVTLTN 226
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 120 GLRKLRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCELVHLQDL 179
GL+ ++ LDL+ +I D + + +L+ LYL N +T L L +LQ L
Sbjct: 111 GLQSIKTLDLTSTQITD----VTPLAGLSNLQVLYLDLNQ----ITNISPLAGLTNLQYL 162
Query: 180 YIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNHFQIPI 239
I N P LANL+ L L DN+++ SPL L ++ + L +N
Sbjct: 163 SIGNNQVNDLTP--LANLSKLTTLRADDNKIS---DISPLASLPNLIEVHLKDNQIS--- 214
Query: 240 SLEPFFNYSKLKIF 253
+ P N S L I
Sbjct: 215 DVSPLANLSNLFIV 228
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 41/243 (16%)
Query: 114 VPKDYRGLRKLRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCE- 172
+P +GL L+ L LS ++ S +FPSL LY++ N K + G E
Sbjct: 290 LPSGMKGLNLLKKLVLSVNHFDQLCQI--SAANFPSLTHLYIRGN--VKKLHLGVGCLEK 345
Query: 173 LVHLQDLYIDRNDFIGSLPWC---LANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLL 229
L +LQ L + ND S C L NL+ L+ L++ N+ G L S +E+L
Sbjct: 346 LGNLQTLDLSHNDIEAS-DCCSLQLKNLSHLQTLNLSHNEPLG-LQSQAFKECPQLELLD 403
Query: 230 LSNNHFQIPISLEPFFNYSKLKIFHANNSLSGPFRLPTRSRKNIIA-------LDISYNK 282
L+ I PF N L++ L+ + S ++++A L++ N
Sbjct: 404 LAFTRLHINAPQSPFQNLHFLQV------LNLTYCFLDTSNQHLLAGLPVLRHLNLKGNH 457
Query: 283 LQ------GHIPVEIGK----VLPNLGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQL 332
Q ++ +G +L + G LSI AF+ S G M+ ++DLS+N L
Sbjct: 458 FQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQQAFH-----SLGKMS---HVDLSHNSL 509
Query: 333 TGE 335
T +
Sbjct: 510 TCD 512
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 113 VVPKDY-RGLRKLRFLDLS-GLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGL 170
+VP + + L+ L FLDLS L + + K G++PSL+TL L N+ T + L
Sbjct: 350 LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEIL 409
Query: 171 CELVHLQDLYIDRNDF 186
L +L L I RN F
Sbjct: 410 LTLKNLTSLDISRNTF 425
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 29/143 (20%)
Query: 197 LTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNHFQ-IPISLEPFFNYSKLKIFHA 255
LT LR+L++ DN+L L + L ++E L +++N Q +PI + + +L
Sbjct: 60 LTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGV-----FDQLV---- 109
Query: 256 NNSLSGPFRLPTRSRKNIIALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPSS 315
N+ L + N+L+ +P + L L +LS+ +N
Sbjct: 110 ----------------NLAELRLDRNQLKS-LPPRVFDSLTKLTYLSLGYNELQSLPKGV 152
Query: 316 FGDMNSLIYLDLSNNQLTGEIPE 338
F + SL L L NNQL +PE
Sbjct: 153 FDKLTSLKELRLYNNQLK-RVPE 174
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 242 EPFFNYSKLKIFHAN-NSLSGPFRLPT---RSRKNIIALDISYNKLQGHIPVEIGKVLPN 297
+ F +KL++ + N N L LP + KN+ L ++ NKLQ +P+ + L N
Sbjct: 55 KAFHRLTKLRLLYLNDNKLQT---LPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVN 110
Query: 298 LGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQLTGEIPEHLAMGCFN 346
L L + N P F + L YL L N+L + L G F+
Sbjct: 111 LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNEL-----QSLPKGVFD 154
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 172 ELVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLS 231
+LV+L +L +DRN P +LT L L + N+L +L LTS++ L L
Sbjct: 107 QLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLY 165
Query: 232 NNHFQ-IPISLEPFFNYSKLKIFHANN 257
NN + +P F ++LK +N
Sbjct: 166 NNQLKRVPEG--AFDKLTELKTLKLDN 190
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 31/139 (22%)
Query: 148 PSLKTLYLKSNNFAKTVTTTQGLCE-----LVHLQDLYIDRNDFIGSL-PWCLANLTSLR 201
PSL+ L+L N T LC L HLQ LY++ N ++ SL P ++LT+LR
Sbjct: 451 PSLEQLFLGENMLQLAWETE--LCWDVFEGLSHLQVLYLNHN-YLNSLPPGVFSHLTALR 507
Query: 202 VLHVPDNQLTG-------------NLSSSPLMH-----LTSIEVLLLSNNHFQIPISLEP 243
L + N+LT ++S + L+ S+ VL +++N F L
Sbjct: 508 GLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECELST 567
Query: 244 FFNYSKLKIFHANNSLSGP 262
F N+ + H N +++GP
Sbjct: 568 FINW----LNHTNVTIAGP 582
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 121 LRKLRFLDLS-GLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCELVHLQDL 179
L+ L +LDLS L + + K ++PSL+TL L+ N+ A T + L L +L ++
Sbjct: 333 LKSLEYLDLSENLMVEEYLKNSACEDAWPSLQTLILRQNHLASLEKTGETLLTLKNLTNI 392
Query: 180 YIDRNDF 186
I +N F
Sbjct: 393 DISKNSF 399
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 36/201 (17%)
Query: 157 SNNFAKTVTTTQGLCELVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSS 216
SNN +T + L +LV D+ ++ N P LANLT+L L + +NQ+T
Sbjct: 76 SNNQLTDITPLKNLTKLV---DILMNNNQIADITP--LANLTNLTGLTLFNNQIT---DI 127
Query: 217 SPLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFHANNSLSGPFRLPTRSRKNIIAL 276
PL +LT++ L LS+N +L + +L + L L T R L
Sbjct: 128 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLER-----L 182
Query: 277 DISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIP--------------------SSF 316
DIS NK+ + + L NL L T N + P +
Sbjct: 183 DISSNKVSD---ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTL 239
Query: 317 GDMNSLIYLDLSNNQLTGEIP 337
+ +L LDL+NNQ++ P
Sbjct: 240 ASLTNLTDLDLANNQISNLAP 260
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 36/201 (17%)
Query: 157 SNNFAKTVTTTQGLCELVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSS 216
SNN +T + L +LV D+ ++ N P LANLT+L L + +NQ+T
Sbjct: 75 SNNQLTDITPLKNLTKLV---DILMNNNQIADITP--LANLTNLTGLTLFNNQIT---DI 126
Query: 217 SPLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFHANNSLSGPFRLPTRSRKNIIAL 276
PL +LT++ L LS+N +L + +L + L L T R L
Sbjct: 127 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLER-----L 181
Query: 277 DISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIP--------------------SSF 316
DIS NK+ + + L NL L T N + P +
Sbjct: 182 DISSNKVSD---ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTL 238
Query: 317 GDMNSLIYLDLSNNQLTGEIP 337
+ +L LDL+NNQ++ P
Sbjct: 239 ASLTNLTDLDLANNQISNLAP 259
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 36/201 (17%)
Query: 157 SNNFAKTVTTTQGLCELVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSS 216
SNN +T + L +LV D+ ++ N P LANLT+L L + +NQ+T
Sbjct: 71 SNNQLTDITPLKNLTKLV---DILMNNNQIADITP--LANLTNLTGLTLFNNQIT---DI 122
Query: 217 SPLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFHANNSLSGPFRLPTRSRKNIIAL 276
PL +LT++ L LS+N +L + +L + L L T R L
Sbjct: 123 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLER-----L 177
Query: 277 DISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIP--------------------SSF 316
DIS NK+ + + L NL L T N + P +
Sbjct: 178 DISSNKVSD---ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTL 234
Query: 317 GDMNSLIYLDLSNNQLTGEIP 337
+ +L LDL+NNQ++ P
Sbjct: 235 ASLTNLTDLDLANNQISNLAP 255
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 36/201 (17%)
Query: 157 SNNFAKTVTTTQGLCELVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSS 216
SNN +T + L +LV D+ ++ N P LANLT+L L + +NQ+T
Sbjct: 71 SNNQLTDITPLKNLTKLV---DILMNNNQIADITP--LANLTNLTGLTLFNNQIT---DI 122
Query: 217 SPLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFHANNSLSGPFRLPTRSRKNIIAL 276
PL +LT++ L LS+N +L + +L + L L T R L
Sbjct: 123 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLER-----L 177
Query: 277 DISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIP--------------------SSF 316
DIS NK+ + + L NL L T N + P +
Sbjct: 178 DISSNKVSD---ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTL 234
Query: 317 GDMNSLIYLDLSNNQLTGEIP 337
+ +L LDL+NNQ++ P
Sbjct: 235 ASLTNLTDLDLANNQISNLAP 255
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 117/300 (39%), Gaps = 26/300 (8%)
Query: 137 GSKV--LHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCELVHLQDLYIDRNDFIGSLPWCL 194
G KV + I +L+ L L N +T L LV L +LYI N L
Sbjct: 53 GEKVASIQGIEYLTNLEYLNLNGNQ----ITDISPLSNLVKLTNLYIGTNKITD--ISAL 106
Query: 195 ANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFH 254
NLT+LR L++ ++ ++ SPL +LT L L NH +S P N + L
Sbjct: 107 QNLTNLRELYLNEDNIS---DISPLANLTKXYSLNLGANHNLSDLS--PLSNXTGLNYLT 161
Query: 255 ANNSLSGPFRLPTRSRKNIIALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPS 314
S P + ++ +L ++YN+++ P+ L +L + + N P
Sbjct: 162 VTESKVKDVT-PIANLTDLYSLSLNYNQIEDISPL---ASLTSLHYFTAYVNQITDITP- 216
Query: 315 SFGDMNSLIYLDLSNNQLTGEIPEHLAMGCFNLEYXXXXXXXXXXXXFSXXXXXXXXXXX 374
+ L L + NN++T P NL
Sbjct: 217 -VANXTRLNSLKIGNNKITDLSP------LANLSQLTWLEIGTNQISDINAVKDLTKLKX 269
Query: 375 XXDGNHFIGDIPESLSNCSSLQGLYISDNDITGSIPTWIGNISFLDAIIMPDNHLEGPIP 434
G++ I DI L+N S L L++++N + IG ++ L + + NH+ P
Sbjct: 270 LNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 153 LYLKSNNFA-KTVTTTQG--LCELVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQ 209
+YL+ N + ++T +G L EL+ LQ++ + P+ L LRVL+V NQ
Sbjct: 248 VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQ 307
Query: 210 LTGNLSSSPLMHLTSIEVLLLSNN 233
LT L S + ++E L+L +N
Sbjct: 308 LT-TLEESVFHSVGNLETLILDSN 330
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 112 LVVPKDYRGLRKLRFLDLSGLRIRD-GSKVLHSIGSFPSLKTLYLKSNNFA 161
+V P +RGL LR L++SG ++ V HS+G +L+TL L SN A
Sbjct: 286 VVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVG---NLETLILDSNPLA 333
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 272 NIIALDISYNKLQGHIPVEIG----KVLPNLGFLSITFNAFNGSIPSSFGDMNSLIYLDL 327
N+ LD+SYN L ++G LP+L +LS+ +N P SF +++L YL L
Sbjct: 249 NLTQLDLSYNNLH-----DVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSL 303
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 39/203 (19%)
Query: 157 SNNFAKTVTTTQGLCELVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSS 216
SNN +T + L +LV D+ ++ N P LANLT+L L + +NQ+T
Sbjct: 71 SNNQLTDITPLKNLTKLV---DILMNNNQIADITP--LANLTNLTGLTLFNNQIT---DI 122
Query: 217 SPLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFHANN--SLSGPFRLPTRSRKNII 274
PL +LT++ L LS+N +L + +L F +N L L T R
Sbjct: 123 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLN-FSSNQVTDLKPLANLTTLER---- 177
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIP--------------------S 314
LDIS NK+ + + L NL L T N + P
Sbjct: 178 -LDISSNKVSD---ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 233
Query: 315 SFGDMNSLIYLDLSNNQLTGEIP 337
+ + +L LDL+NNQ++ P
Sbjct: 234 TLASLTNLTDLDLANNQISNLAP 256
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 39/203 (19%)
Query: 157 SNNFAKTVTTTQGLCELVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSS 216
SNN +T + L +LV D+ ++ N P LANLT+L L + +NQ+T
Sbjct: 71 SNNQLTDITPLKNLTKLV---DILMNNNQIADITP--LANLTNLTGLTLFNNQITD---I 122
Query: 217 SPLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFHANN--SLSGPFRLPTRSRKNII 274
PL +LT++ L LS+N +L + +L F +N L L T R
Sbjct: 123 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS-FSSNQVTDLKPLANLTTLER---- 177
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIP--------------------S 314
LDIS NK+ + + L NL L T N + P
Sbjct: 178 -LDISSNKVSD---ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 233
Query: 315 SFGDMNSLIYLDLSNNQLTGEIP 337
+ + +L LDL+NNQ++ P
Sbjct: 234 TLASLTNLTDLDLANNQISNLAP 256
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 39/203 (19%)
Query: 157 SNNFAKTVTTTQGLCELVHLQDLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSS 216
SNN +T + L +LV D+ ++ N P LANLT+L L + +NQ+T
Sbjct: 71 SNNQLTDITPLKNLTKLV---DILMNNNQIADITP--LANLTNLTGLTLFNNQIT---DI 122
Query: 217 SPLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFHANN--SLSGPFRLPTRSRKNII 274
PL +LT++ L LS+N +L + +L F +N L L T R
Sbjct: 123 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS-FSSNQVTDLKPLANLTTLER---- 177
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIP--------------------S 314
LDIS NK+ + + L NL L T N + P
Sbjct: 178 -LDISSNKVSD---ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 233
Query: 315 SFGDMNSLIYLDLSNNQLTGEIP 337
+ + +L LDL+NNQ++ P
Sbjct: 234 TLASLTNLTDLDLANNQISNLAP 256
>pdb|1LTX|A Chain A, Structure Of Rab Escort Protein-1 In Complex With Rab
Geranylgeranyl Transferase And Isoprenoid
Length = 567
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 173 LVHLQDL----YID-RNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEV 227
L HL+ L ++D ++ + +LP LA L L VL DN L + +L ++
Sbjct: 456 LCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN---VDGVANLPRLQE 512
Query: 228 LLLSNNHFQIPISLEPFFNYSKL 250
LLL NN Q +++P + +L
Sbjct: 513 LLLCNNRLQQSAAIQPLVSCPRL 535
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 29/99 (29%)
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIP----SSFGDMNSLIY------ 324
LD+S+N+LQ +P+ +G+ LP L L ++FN S+P G++ L
Sbjct: 81 TLDLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK 137
Query: 325 ---------------LDLSNNQLTGEIPEHLAMGCFNLE 348
L L+NNQLT E+P L G NL+
Sbjct: 138 TLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLD 175
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 29/99 (29%)
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIP----SSFGDMNSLIY------ 324
LD+S+N+LQ +P+ +G+ LP L L ++FN S+P G++ L
Sbjct: 81 TLDLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK 137
Query: 325 ---------------LDLSNNQLTGEIPEHLAMGCFNLE 348
L L+NNQLT E+P L G NL+
Sbjct: 138 TLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLD 175
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 29/99 (29%)
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIP----SSFGDMNSLIY------ 324
LD+S+N+LQ +P+ +G+ LP L L ++FN S+P G++ L
Sbjct: 81 TLDLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK 137
Query: 325 ---------------LDLSNNQLTGEIPEHLAMGCFNLE 348
L L+NNQLT E+P L G NL+
Sbjct: 138 TLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLD 175
>pdb|1DCE|A Chain A, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
pdb|1DCE|C Chain C, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
Length = 567
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 173 LVHLQDL----YID-RNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEV 227
L HL+ L ++D ++ + +LP LA L L VL DN L + +L ++
Sbjct: 456 LCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN---VDGVANLPRLQE 512
Query: 228 LLLSNNHFQIPISLEPFFNYSKL 250
LLL NN Q +++P + +L
Sbjct: 513 LLLCNNRLQQSAAIQPLVSCPRL 535
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 29/99 (29%)
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIP----SSFGDMNSLIY------ 324
LD+S+N+LQ +P+ +G+ LP L L ++FN S+P G++ L
Sbjct: 81 TLDLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELK 137
Query: 325 ---------------LDLSNNQLTGEIPEHLAMGCFNLE 348
L L+NNQLT E+P L G NL+
Sbjct: 138 TLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLD 175
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 118 YRGLRKLRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCELVHLQ 177
++G++KL ++ RI D + G PSL L+L N K + L L +L
Sbjct: 167 FQGMKKLSYI-----RIADTNITTIPQGLPPSLTELHLDGNKITKVDAAS--LKGLNNLA 219
Query: 178 DLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNHF 235
L + N LAN LR LH+ +N+L L I+V+ L NN+
Sbjct: 220 KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK--VPGGLADHKYIQVVYLHNNNI 275
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 118 YRGLRKLRFLDLSGLRIRDGSKVLHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCELVHLQ 177
++G++KL ++ RI D + G PSL L+L N K + L L +L
Sbjct: 167 FQGMKKLSYI-----RIADTNITTIPQGLPPSLTELHLDGNKITKVDAAS--LKGLNNLA 219
Query: 178 DLYIDRNDFIGSLPWCLANLTSLRVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNHF 235
L + N LAN LR LH+ +N+L L I+V+ L NN+
Sbjct: 220 KLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK--VPGGLADHKYIQVVYLHNNNI 275
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 378 GNHFIGDIPESLSNCSSLQGLYISDNDITGSIPTWIGNISFLD 420
GN + + PE ++ C SL L I NDI NIS LD
Sbjct: 551 GNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKITPNISVLD 593
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 298 LGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQLTGEIPEHLAMGCFNL 347
+G L++ + I + G +N ++L + +L G PE + MG F +
Sbjct: 54 MGRLNVKNEELDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIMGAFKV 103
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 377 DGNHFIGDIPESLSNCSSLQGLYISDNDITGSIPTWIGNISFLDAIIMPDNHLEGPIPSE 436
DGN F +P+ LSN L + +S+N I+ N++ L +I+ N L P
Sbjct: 39 DGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRT 97
Query: 437 FCQLDYLEILDLSKNNIA 454
F L L +L L N+I+
Sbjct: 98 FDGLKSLRLLSLHGNDIS 115
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQL 332
LD+S+N+LQ +P+ +G+ LP L L ++FN + + L L L N+L
Sbjct: 81 TLDLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQL 332
LD+S+N+LQ +P+ +G+ LP L L ++FN + + L L L N+L
Sbjct: 81 TLDLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQL 332
LD+S+N+LQ +P+ +G+ LP L L ++FN + + L L L N+L
Sbjct: 81 TLDLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQL 332
LD+S+N+LQ +P+ +G+ LP L L ++FN + + L L L N+L
Sbjct: 81 TLDLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQL 332
LD+S+N+LQ +P+ +G+ LP L L ++FN + + L L L N+L
Sbjct: 82 TLDLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 137
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 275 ALDISYNKLQGHIPVEIGKVLPNLGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQL 332
LD+S+N+LQ +P+ +G+ LP L L ++FN + + L L L N+L
Sbjct: 81 TLDLSHNQLQS-LPL-LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136
>pdb|1DS9|A Chain A, Solution Structure Of Chlamydomonas Outer Arm Dynein Light
Chain 1
Length = 198
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 20/130 (15%)
Query: 141 LHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCELVHLQDLYIDRNDFIGSLPWCLANLTSL 200
+ S+ +L+ L L N K + + + L++L+I N I SL + L +L
Sbjct: 63 ISSLSGMENLRILSL-GRNLIKKIENLDAVAD--TLEELWISYNQ-IASLS-GIEKLVNL 117
Query: 201 RVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFHANNSLS 260
RVL++ +N++T L L +E LLL+ N P +N K N+ +
Sbjct: 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGN---------PLYNDYK------ENNAT 162
Query: 261 GPFRLPTRSR 270
+R+ R
Sbjct: 163 SEYRIEVVKR 172
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 28.5 bits (62), Expect = 8.0, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 298 LGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQLTGEIPEHLAMGCFNL 347
+G L++ + I + G +N ++L + +L G PE + MG F +
Sbjct: 36 MGRLNVKNEELDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIMGAFKV 85
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 28.5 bits (62), Expect = 8.6, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 298 LGFLSITFNAFNGSIPSSFGDMNSLIYLDLSNNQLTGEIPEHLAMGCFNL 347
+G L++ + I + G +N ++L + +L G PE + MG F +
Sbjct: 41 MGRLNVKNEELDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIMGAFKV 90
>pdb|1M9L|A Chain A, Relaxation-Based Refined Structure Of Chlamydomonas Outer
Arm Dynein Light Chain 1
Length = 199
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 20/130 (15%)
Query: 141 LHSIGSFPSLKTLYLKSNNFAKTVTTTQGLCELVHLQDLYIDRNDFIGSLPWCLANLTSL 200
+ S+ +L+ L L N K + + + L++L+I N I SL + L +L
Sbjct: 64 ISSLSGMENLRILSL-GRNLIKKIENLDAVADT--LEELWISYNQ-IASLS-GIEKLVNL 118
Query: 201 RVLHVPDNQLTGNLSSSPLMHLTSIEVLLLSNNHFQIPISLEPFFNYSKLKIFHANNSLS 260
RVL++ +N++T L L +E LLL+ N P +N K N+ +
Sbjct: 119 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGN---------PLYNDYK------ENNAT 163
Query: 261 GPFRLPTRSR 270
+R+ R
Sbjct: 164 SEYRIEVVKR 173
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,383,596
Number of Sequences: 62578
Number of extensions: 417651
Number of successful extensions: 1207
Number of sequences better than 100.0: 70
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 922
Number of HSP's gapped (non-prelim): 221
length of query: 459
length of database: 14,973,337
effective HSP length: 102
effective length of query: 357
effective length of database: 8,590,381
effective search space: 3066766017
effective search space used: 3066766017
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)