BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039784
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LFM2|GASAA_ARATH Gibberellin-regulated protein 10 OS=Arabidopsis thaliana
GN=GASA10 PE=2 SV=1
Length = 89
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Query: 1 MKLALVTFLLVSLVLTSTFFEVSMAGSDFCDSKCAVRCSKAGREDRCLKYCGICCDKC-H 59
MK V L++SL++TS+ F +S A S C KC VRCSKAGR+DRCLKYC ICC+KC +
Sbjct: 1 MKFPAVKVLIISLLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNY 60
Query: 60 CVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
CVPSGTYG+KDECPCYRD+KNSKG KCP
Sbjct: 61 CVPSGTYGNKDECPCYRDMKNSKGTSKCP 89
>sp|O80641|GASA8_ARATH Gibberellin-regulated protein 8 OS=Arabidopsis thaliana
GN=At2g39540 PE=2 SV=1
Length = 87
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
Query: 1 MKLALVTFLLVSLVLTSTFFEVSMAGSDFCDSKCAVRCSKAGREDRCLKYCGICCDKCHC 60
MKL +V F ++SL+LTS+F +S A S C KC VRCSKAG+ + CLKYC ICC KC+C
Sbjct: 1 MKLVVVQFFIISLLLTSSFSVLSSADSS-CGGKCNVRCSKAGQHEECLKYCNICCQKCNC 59
Query: 61 VPSGTYGHKDECPCYRDLKNSKGKPKCP 88
VPSGT+GHKDECPCYRD+KNSKG KCP
Sbjct: 60 VPSGTFGHKDECPCYRDMKNSKGGSKCP 87
>sp|Q948Z4|SNAK1_SOLTU Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1
Length = 88
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 74/88 (84%)
Query: 1 MKLALVTFLLVSLVLTSTFFEVSMAGSDFCDSKCAVRCSKAGREDRCLKYCGICCDKCHC 60
MKL L+T LLV+LV+T + + +MAGS FCDSKC +RCSKAG DRCLKYCGICC++C C
Sbjct: 1 MKLFLLTLLLVTLVITPSLIQTTMAGSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKC 60
Query: 61 VPSGTYGHKDECPCYRDLKNSKGKPKCP 88
VPSGTYG+K ECPCYRD KNSKGK KCP
Sbjct: 61 VPSGTYGNKHECPCYRDKKNSKGKSKCP 88
>sp|P86888|PMLN_PRUPE Peamaclein OS=Prunus persica PE=1 SV=1
Length = 63
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 59/63 (93%)
Query: 26 GSDFCDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKP 85
GS FCDSKC VRCSKAG ++RCLKYCGICC+KCHCVPSGTYG+KDECPCYRDLKNSKG P
Sbjct: 1 GSSFCDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNP 60
Query: 86 KCP 88
KCP
Sbjct: 61 KCP 63
>sp|O82328|GASA7_ARATH Gibberellin-regulated protein 7 OS=Arabidopsis thaliana GN=GASA7
PE=3 SV=1
Length = 108
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 46/60 (76%)
Query: 29 FCDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
+C KC RC +AG +DRCLKYCGICC C CVPSGTYG+K EC CYRD +SKG PKCP
Sbjct: 49 WCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108
>sp|P47926|RSI1_SOLLC Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1
Length = 96
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%)
Query: 3 LALVTFLLVSLVLTSTFFEVSMAGSDFCDSKCAVRCSKAGREDRCLKYCGICCDKCHCVP 62
L L++ L+ L ++ + C +C RCS + C+ +C CC C CVP
Sbjct: 11 LLLISMFLILLTFSNVVEGYNKLRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVP 70
Query: 63 SGTYGHKDECPCYRDLKNSKGKPKCP 88
G YG+K CPCY + K +GKPKCP
Sbjct: 71 KGVYGNKQSCPCYNNWKTQEGKPKCP 96
>sp|P27057|GAST1_SOLLC Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1
Length = 112
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%)
Query: 30 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
C KC RCSK + C+ +C CC KC CVP+GTYG+K CPCY + K +G PKCP
Sbjct: 54 CQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
>sp|P46690|GASA4_ARATH Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4
PE=1 SV=2
Length = 106
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 5 LVTFLLVSLVLTSTFFEVSMAGSDF---------CDSKCAVRCSKAGREDRCLKYCGICC 55
+V F+L ++V+ S+ V + + C S+C RC K C+ +C CC
Sbjct: 14 IVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCC 73
Query: 56 DKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
KC CVP G YG+K C CY + K +G PKCP
Sbjct: 74 RKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106
>sp|Q6NMQ7|GASA6_ARATH Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6
PE=3 SV=1
Length = 101
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 1 MKLALVTFLLVSLVLTSTFFEVSMAG-------------SDFCDSKCAVRCSKAGREDRC 47
M + +FLL++++ T +S S C +C RCS C
Sbjct: 1 MAKLITSFLLLTILFTFVCLTMSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKPC 60
Query: 48 LKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
+ +C CC KC CVP GTYG+K CPCY + K +G PKCP
Sbjct: 61 MFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101
>sp|Q8GWK5|GASA9_ARATH Gibberellin-regulated protein 9 OS=Arabidopsis thaliana GN=GASA9
PE=2 SV=1
Length = 119
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 34/59 (57%)
Query: 30 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
C CA RCSK R+ C + CG CC KC CVP GT G+ CPCY ++ K KCP
Sbjct: 61 CGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119
>sp|F4IQJ4|GASAB_ARATH Gibberellin-regulated protein 11 OS=Arabidopsis thaliana
GN=GASA11 PE=3 SV=1
Length = 94
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 30 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
C+S+C RCS + R + C + CG CC +C+CV GT G+ D+CPCY L G+ KCP
Sbjct: 36 CNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94
>sp|P46687|GASA3_ARATH Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3
PE=2 SV=1
Length = 99
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 30 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
C +C RCSK+ R + CL+ C CC +C+CVP GT G+ CPCY + G+ KCP
Sbjct: 41 CGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99
>sp|Q93X17|SNAK2_SOLTU Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1
Length = 104
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 6 VTFLLVSLVLTSTFFEVSMAGSDF-CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSG 64
V + V ++ E + + C CA RC + R C + CG CC +C+CVP G
Sbjct: 21 VQSIQTDQVTSNAISEAAYSYKKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPG 80
Query: 65 TYGHKDECPCYRDLKNSKGKPKCP 88
T G+ + CPCY L K KCP
Sbjct: 81 TSGNTETCPCYASLTTHGNKRKCP 104
>sp|Q9LFR3|GASAE_ARATH Gibberellin-regulated protein 14 OS=Arabidopsis thaliana GN=GASA14
PE=1 SV=1
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 30 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDEC-PCYRDLKNSKGKPKCP 88
C C RC + R++ C++ C CC +C CVP GTYG+K++C CY ++K GK KCP
Sbjct: 216 CVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSKCP 275
>sp|P46689|GASA1_ARATH Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1
PE=2 SV=2
Length = 98
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%)
Query: 30 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
C S C RC + R C + CG CC +C+CVP GTYG+ D+C CY L G+ KCP
Sbjct: 40 CGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98
>sp|Q6GKX7|GASAC_ARATH Gibberellin-regulated protein 12 OS=Arabidopsis thaliana GN=GASA12
PE=3 SV=1
Length = 106
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 23/103 (22%)
Query: 9 LLVSLVLTSTFFEVSMAGSDFCDSK-----------------------CAVRCSKAGRED 45
L+V V++S F + D +S+ C RCS
Sbjct: 4 LIVVFVISSLLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHRK 63
Query: 46 RCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
CL +C CC+KC CVPSGTYGHK+ECPCY + +G PKCP
Sbjct: 64 PCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106
>sp|Q84J95|GASA5_ARATH Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5
PE=2 SV=1
Length = 97
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 30 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
C+SKC+ RCS + C+ +C CC KC CVP GT+G+K CPCY + K +G+PKCP
Sbjct: 39 CNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 97
>sp|A8MR46|GASAD_ARATH Gibberellin-regulated protein 13 OS=Arabidopsis thaliana GN=GASA13
PE=3 SV=1
Length = 103
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 36/59 (61%)
Query: 30 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
C +C RCS + CL +C CC+KC CVP GTYG+K CPCY + K G PKCP
Sbjct: 45 CGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103
>sp|P46688|GASA2_ARATH Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2
PE=2 SV=1
Length = 99
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 30 CDSKCAVRCSKAGREDRCLKYCGICCDKCHCVPSGTYGHKDECPCYRDLKNSKGKPKCP 88
C +C RCSK+ R CL+ C CC +C+CVP GT G+ CPCY + G+ KCP
Sbjct: 41 CGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99
>sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens
GN=WDFY3 PE=1 SV=2
Length = 3526
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Query: 26 GSDFCDSKCAVRCSKAGREDRCLKYCG-ICCDKCHCVPSGTYGHKDECP------CYRDL 78
G D C S C+VR S R C + CG + C KC S K P CY +L
Sbjct: 3456 GGDSC-SGCSVRFSLTERRHHC-RNCGQLFCQKCSRFQSEIKRLKISSPVRVCQNCYYNL 3513
Query: 79 KNSKGKPKCP 88
++ +G P
Sbjct: 3514 QHERGSEDGP 3523
>sp|P59496|END4_BUCBP Probable endonuclease 4 OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=nfo PE=3 SV=1
Length = 278
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 1 MKLALVTFLLVSLVLTSTFFEVSMAGSDFCDSKCAVRCSKAGREDRCLKYCGICCDKCHC 60
+ AL + V LV+ +T + S G +C A K +DR GIC D CH
Sbjct: 130 INFALQNTVGVKLVIENTAGQGSNIG--YCFEHLAQIIHKVKEKDRI----GICLDTCHL 183
Query: 61 VPSGTYGHKDECPCYRDLK 79
SG Y K E C + K
Sbjct: 184 HASG-YDLKTELGCRQTFK 201
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.482
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,935,592
Number of Sequences: 539616
Number of extensions: 1158074
Number of successful extensions: 4217
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 4175
Number of HSP's gapped (non-prelim): 67
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)