Query 039786
Match_columns 210
No_of_seqs 122 out of 1194
Neff 10.5
Searched_HMMs 13730
Date Mon Mar 25 22:56:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039786.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039786hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1p9ag_ c.10.2.7 (G:) von Will 99.7 1.7E-16 1.3E-20 118.1 10.2 174 4-184 31-206 (266)
2 d1ogqa_ c.10.2.8 (A:) Polygala 99.6 1.3E-15 9.2E-20 115.9 10.5 180 2-184 74-279 (313)
3 d1ozna_ c.10.2.7 (A:) Reticulo 99.5 1.9E-14 1.4E-18 107.8 11.0 175 5-183 33-235 (284)
4 d1h6ta2 c.10.2.1 (A:31-240) In 99.5 2.4E-14 1.7E-18 102.7 9.2 164 3-182 45-209 (210)
5 d2astb2 c.10.1.3 (B:2136-2419) 99.5 2.6E-15 1.9E-19 112.7 2.5 179 3-183 45-235 (284)
6 d2omxa2 c.10.2.1 (A:37-235) In 99.5 1.6E-13 1.2E-17 97.5 11.5 140 25-177 58-198 (199)
7 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 9.5E-14 6.9E-18 100.6 8.8 166 3-184 40-206 (227)
8 d1p9ag_ c.10.2.7 (G:) von Will 99.5 5.1E-14 3.7E-18 104.5 7.4 173 3-185 9-184 (266)
9 d1h6ua2 c.10.2.1 (A:36-262) In 99.4 4.4E-13 3.2E-17 97.1 11.2 165 2-182 61-226 (227)
10 d1xkua_ c.10.2.7 (A:) Decorin 99.4 3.6E-13 2.6E-17 101.6 9.4 37 147-184 217-253 (305)
11 d2omxa2 c.10.2.1 (A:37-235) In 99.4 5.2E-13 3.8E-17 94.8 9.5 147 26-185 37-184 (199)
12 d1ozna_ c.10.2.7 (A:) Reticulo 99.4 8.4E-13 6.1E-17 98.7 10.4 152 29-184 32-212 (284)
13 d1h6ta2 c.10.2.1 (A:31-240) In 99.4 3.7E-13 2.7E-17 96.4 7.2 146 27-185 44-190 (210)
14 d2omza2 c.10.2.1 (A:33-416) In 99.4 1.3E-12 9.3E-17 101.2 10.8 167 2-184 195-362 (384)
15 d1ogqa_ c.10.2.8 (A:) Polygala 99.4 1.9E-12 1.4E-16 97.9 10.6 178 4-184 50-255 (313)
16 d1xkua_ c.10.2.7 (A:) Decorin 99.4 2.1E-12 1.5E-16 97.4 10.2 108 76-185 170-284 (305)
17 d2astb2 c.10.1.3 (B:2136-2419) 99.4 1.1E-13 8.3E-18 103.6 3.0 157 2-160 69-236 (284)
18 d1a9na_ c.10.2.4 (A:) Spliceso 99.3 3.5E-13 2.6E-17 92.5 4.3 125 56-185 19-151 (162)
19 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.3 6.6E-11 4.8E-15 86.0 13.2 174 4-184 29-212 (242)
20 d2omza2 c.10.2.1 (A:33-416) In 99.2 1.8E-11 1.3E-15 94.6 10.2 166 2-183 217-383 (384)
21 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.2 7.5E-11 5.5E-15 85.7 11.1 177 2-182 51-234 (242)
22 d1a9na_ c.10.2.4 (A:) Spliceso 99.2 1E-11 7.2E-16 85.1 4.0 103 3-111 17-122 (162)
23 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.1 1.4E-10 1E-14 81.5 7.4 104 55-160 29-137 (192)
24 d1dcea3 c.10.2.2 (A:444-567) R 99.0 8.2E-11 6E-15 76.8 4.2 81 25-109 16-98 (124)
25 d1m9la_ c.10.3.1 (A:) Outer ar 99.0 3.8E-12 2.8E-16 90.2 -2.6 84 20-109 39-123 (198)
26 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.0 3.9E-10 2.8E-14 79.1 7.2 106 29-136 29-137 (192)
27 d1dcea3 c.10.2.2 (A:444-567) R 99.0 4.8E-10 3.5E-14 73.1 6.9 71 33-109 2-73 (124)
28 d1jl5a_ c.10.2.6 (A:) Leucine 98.9 5.1E-09 3.7E-13 79.4 10.4 36 53-89 96-132 (353)
29 d1m9la_ c.10.3.1 (A:) Outer ar 98.8 2.8E-11 2.1E-15 85.6 -4.7 102 2-111 46-150 (198)
30 d2ifga3 c.10.2.7 (A:36-191) Hi 98.7 1.7E-08 1.3E-12 68.1 6.7 87 21-109 23-111 (156)
31 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.5 1.1E-08 8.3E-13 77.8 2.1 127 56-183 159-312 (344)
32 d2ifga3 c.10.2.7 (A:36-191) Hi 98.5 1.3E-07 9.2E-12 63.8 6.3 59 50-109 27-88 (156)
33 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.4 1.2E-08 8.8E-13 77.6 -1.2 108 76-184 157-284 (344)
34 d1jl5a_ c.10.2.6 (A:) Leucine 98.4 1.6E-06 1.2E-10 65.1 10.7 91 5-111 39-130 (353)
35 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.7 9.1E-06 6.7E-10 63.0 3.2 105 4-110 2-121 (460)
36 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.5 9E-06 6.6E-10 63.0 0.8 105 30-136 3-123 (460)
37 d1koha1 c.10.2.3 (A:201-362) m 97.1 2.1E-05 1.6E-09 52.8 -0.8 79 52-131 63-152 (162)
38 d1pgva_ c.10.1.1 (A:) Tropomod 97.0 0.00011 7.8E-09 49.4 1.8 35 75-109 70-108 (167)
39 d1koha1 c.10.2.3 (A:201-362) m 96.9 5.9E-05 4.3E-09 50.5 -0.0 87 69-155 57-152 (162)
40 d1pgva_ c.10.1.1 (A:) Tropomod 96.3 0.0012 8.6E-08 44.1 2.9 17 23-39 38-54 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 96.1 0.00089 6.5E-08 44.6 1.7 36 74-109 71-110 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 95.6 0.0022 1.6E-07 42.6 2.0 18 22-39 39-56 (166)
No 1
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.7e-16 Score=118.13 Aligned_cols=174 Identities=20% Similarity=0.147 Sum_probs=128.8
Q ss_pred CCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCccEE
Q 039786 4 RQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLIRL 82 (210)
Q Consensus 4 ~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~~L 82 (210)
++|++|++++ +....-.+.+++++++|++|++++|... . +..+..++ +|++|++++ .++..+..+..+++|+.|
T Consensus 31 ~~l~~L~Ls~-N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~--l~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~l~~L~~L 105 (266)
T d1p9ag_ 31 KDTTILHLSE-NLLYTFSLATLMPYTRLTQLNLDRAELT-K--LQVDGTLP-VLGTLDLSHNQLQSLPLLGQTLPALTVL 105 (266)
T ss_dssp TTCCEEECTT-SCCSEEEGGGGTTCTTCCEEECTTSCCC-E--EECCSCCT-TCCEEECCSSCCSSCCCCTTTCTTCCEE
T ss_pred cCCCEEECcC-CcCCCcCHHHhhcccccccccccccccc-c--cccccccc-cccccccccccccccccccccccccccc
Confidence 4788999885 2222222456888999999999886543 2 23345566 899999988 777777788888999999
Q ss_pred EEEeecCCCcchhhhhcCCCccEEEecCccCCcceEecCCCCCcccEEEecccCcceeeEEc-cCCCCcccEEEeccCCC
Q 039786 83 GLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVIIE-KGAVPDIRELRIGPCPL 161 (210)
Q Consensus 83 ~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~-~~~~~~L~~L~i~~~~~ 161 (210)
++++|.+.......+..+++++.|.+..+............+++++.+++.++. +..++.. .+.+++|++|++++|.
T Consensus 106 ~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~- 183 (266)
T d1p9ag_ 106 DVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN-LTELPAGLLNGLENLDTLLLQENS- 183 (266)
T ss_dssp ECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC-CSCCCTTTTTTCTTCCEEECCSSC-
T ss_pred cccccccceeeccccccccccccccccccccceeccccccccccchhccccccc-ccccCccccccccccceeecccCC-
Confidence 999988777666777888999999987432222112223457889999998764 4444432 4568999999999998
Q ss_pred CCcccccccccccccceeeecch
Q 039786 162 LMEIPIGIEHLKNLKLLKFAGMV 184 (210)
Q Consensus 162 l~~lp~~l~~l~~L~~l~l~~~~ 184 (210)
++.+|.++..+++|+.|++.++|
T Consensus 184 L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 184 LYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp CCCCCTTTTTTCCCSEEECCSCC
T ss_pred CcccChhHCCCCCCCEEEecCCC
Confidence 88999999999999999999854
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.61 E-value=1.3e-15 Score=115.85 Aligned_cols=180 Identities=19% Similarity=0.101 Sum_probs=102.2
Q ss_pred CCCCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCc-cCChhhhcCCCc
Q 039786 2 KLRQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMK-KLPDWIFKLKNL 79 (210)
Q Consensus 2 ~L~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~-~~p~~~~~l~~L 79 (210)
+|++|++|++++++...+.+|++++++++|++|++++|......+ ..+..+. +|+.+++.. .+. .+|.+++.++.|
T Consensus 74 ~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~-~~~~~~~-~L~~l~l~~N~~~~~~p~~l~~l~~L 151 (313)
T d1ogqa_ 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIP-DFLSQIK-TLVTLDFSYNALSGTLPPSISSLPNL 151 (313)
T ss_dssp GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECC-GGGGGCT-TCCEEECCSSEEESCCCGGGGGCTTC
T ss_pred cCccccccccccccccccccccccccccccchhhhcccccccccc-ccccchh-hhcccccccccccccCchhhccCccc
Confidence 456666666653112233455566666666666666654333221 2233333 566666654 222 356666666777
Q ss_pred cEEEEEeecCCCcchhhhhcCCCc-cEEEecCc-cC----------------------CcceEecCCCCCcccEEEeccc
Q 039786 80 IRLGLELSGLAEEPIRVLQASPNL-LEILLTGT-YD----------------------YELFHFEAGWFPKLQKLLLWDF 135 (210)
Q Consensus 80 ~~L~l~~~~l~~~~~~~l~~l~~L-~~L~l~~~-~~----------------------~~~~~~~~~~~~~L~~L~l~~~ 135 (210)
+++++++|.+....+..+..++.+ +.+.++.. .. ...++.....+++++.+++.++
T Consensus 152 ~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~ 231 (313)
T d1ogqa_ 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN 231 (313)
T ss_dssp CEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSS
T ss_pred ceeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 777776666544434445555444 44443311 00 0001111234466777776655
Q ss_pred CcceeeEEccCCCCcccEEEeccCCCCCcccccccccccccceeeecch
Q 039786 136 IAVKSVIIEKGAVPDIRELRIGPCPLLMEIPIGIEHLKNLKLLKFAGMV 184 (210)
Q Consensus 136 ~~l~~~~~~~~~~~~L~~L~i~~~~~l~~lp~~l~~l~~L~~l~l~~~~ 184 (210)
.. ...+...+.+++|+.|++++|.....+|..++.+++|++|+++++.
T Consensus 232 ~l-~~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~ 279 (313)
T d1ogqa_ 232 SL-AFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279 (313)
T ss_dssp EE-CCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSE
T ss_pred cc-cccccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCc
Confidence 42 2222345568899999999998545899999999999999999874
No 3
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=1.9e-14 Score=107.78 Aligned_cols=175 Identities=15% Similarity=0.092 Sum_probs=120.3
Q ss_pred CCcEEEEEecCCCcchHH-HHhhcCCCCceEEEEecCccc------------------------ccccccccCCccCceE
Q 039786 5 QLRKLSIRPQNGNGKDLC-GLIANLKNLESLTVEMTSKEE------------------------ILDLLSLSSPPQYLQR 59 (210)
Q Consensus 5 ~L~~L~l~~~~~~~~~~~-~~l~~l~~L~~L~l~~~~~~~------------------------~~~~~~~~~~~~~L~~ 59 (210)
++++|++++ .....++ .++.++++|++|+++++.... ..+...+..++ +|++
T Consensus 33 ~~~~L~Ls~--N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~-~L~~ 109 (284)
T d1ozna_ 33 ASQRIFLHG--NRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLG-RLHT 109 (284)
T ss_dssp TCSEEECTT--SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCT-TCCE
T ss_pred CCCEEECcC--CcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccc-cCCE
Confidence 678888885 2233333 467888899999998754311 11112334455 7888
Q ss_pred EEeec-cCccCC-hhhhcCCCccEEEEEeecCCCcchhhhhcCCCccEEEecCccCCcceE-ecCCCCCcccEEEecccC
Q 039786 60 LYLTG-NMKKLP-DWIFKLKNLIRLGLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFH-FEAGWFPKLQKLLLWDFI 136 (210)
Q Consensus 60 L~l~~-~~~~~p-~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~~~ 136 (210)
|++.+ .+..++ ..+..+++|+.+++.+|.++..+...+..+++|+.|+++++.- ..+. ....++++|+.+.+.++.
T Consensus 110 L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l-~~l~~~~f~~l~~L~~l~l~~N~ 188 (284)
T d1ozna_ 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI-SSVPERAFRGLHSLDRLLLHQNR 188 (284)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC-CEECTTTTTTCTTCCEEECCSSC
T ss_pred EecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcc-cccchhhhccccccchhhhhhcc
Confidence 88887 555543 3566778899999999888877777788889999999874432 2222 223556788999988765
Q ss_pred cceeeEEccCCCCcccEEEeccCCCCCcccccccccccccceeeecc
Q 039786 137 AVKSVIIEKGAVPDIRELRIGPCPLLMEIPIGIEHLKNLKLLKFAGM 183 (210)
Q Consensus 137 ~l~~~~~~~~~~~~L~~L~i~~~~~l~~lp~~l~~l~~L~~l~l~~~ 183 (210)
.....+.....+++|++|++++|...+..+..++.+++|++|++.++
T Consensus 189 l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N 235 (284)
T d1ozna_ 189 VAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235 (284)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSS
T ss_pred ccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCC
Confidence 43322334556789999999999844444556788999999999884
No 4
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.52 E-value=2.4e-14 Score=102.70 Aligned_cols=164 Identities=21% Similarity=0.293 Sum_probs=110.5
Q ss_pred CCCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCccE
Q 039786 3 LRQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLIR 81 (210)
Q Consensus 3 L~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~~ 81 (210)
|.+|++|++++ .....+ ..+..+++|++|++++|.... +..+..++ +|++|++.+ .++.+| .+..+++|+.
T Consensus 45 L~~L~~L~l~~--~~i~~l-~~l~~l~~L~~L~L~~n~i~~---l~~~~~l~-~L~~L~l~~n~i~~l~-~l~~l~~L~~ 116 (210)
T d1h6ta2 45 LNSIDQIIANN--SDIKSV-QGIQYLPNVTKLFLNGNKLTD---IKPLANLK-NLGWLFLDENKVKDLS-SLKDLKKLKS 116 (210)
T ss_dssp HHTCCEEECTT--SCCCCC-TTGGGCTTCCEEECCSSCCCC---CGGGTTCT-TCCEEECCSSCCCCGG-GGTTCTTCCE
T ss_pred hcCccEEECcC--CCCCCc-hhHhhCCCCCEEeCCCccccC---ccccccCc-cccccccccccccccc-cccccccccc
Confidence 45778888775 222222 246778888888888764322 23345565 788888877 777776 4677888888
Q ss_pred EEEEeecCCCcchhhhhcCCCccEEEecCccCCcceEecCCCCCcccEEEecccCcceeeEEccCCCCcccEEEeccCCC
Q 039786 82 LGLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVIIEKGAVPDIRELRIGPCPL 161 (210)
Q Consensus 82 L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~L~~L~i~~~~~ 161 (210)
|++.+|.+.. +..+..++.++.++++.+.... . .....+++|+.+++.++. +..++ ....+++|+.|++++|.
T Consensus 117 L~l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~-~-~~~~~l~~L~~l~l~~n~-l~~i~-~l~~l~~L~~L~Ls~N~- 189 (210)
T d1h6ta2 117 LSLEHNGISD--INGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQ-ISDIV-PLAGLTKLQNLYLSKNH- 189 (210)
T ss_dssp EECTTSCCCC--CGGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSC-CCCCG-GGTTCTTCCEEECCSSC-
T ss_pred cccccccccc--cccccccccccccccccccccc-c-cccccccccccccccccc-ccccc-cccCCCCCCEEECCCCC-
Confidence 8888887654 4467788888888886332111 1 123456788888888764 33332 24568888999998886
Q ss_pred CCcccccccccccccceeeec
Q 039786 162 LMEIPIGIEHLKNLKLLKFAG 182 (210)
Q Consensus 162 l~~lp~~l~~l~~L~~l~l~~ 182 (210)
++.+| .+..+++|++|++++
T Consensus 190 i~~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 190 ISDLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp CCBCG-GGTTCTTCSEEEEEE
T ss_pred CCCCh-hhcCCCCCCEEEccC
Confidence 67776 578888888888864
No 5
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=2.6e-15 Score=112.69 Aligned_cols=179 Identities=18% Similarity=0.220 Sum_probs=123.3
Q ss_pred CCCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec--cCcc--CChhhhcCCC
Q 039786 3 LRQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG--NMKK--LPDWIFKLKN 78 (210)
Q Consensus 3 L~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~--~~~~--~p~~~~~l~~ 78 (210)
..+|++|+++++......+...+.++++|++|++.+|.. ....+..+...+ +|++|++.+ .++. +......+++
T Consensus 45 ~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l-~~~~~~~l~~~~-~L~~L~Ls~c~~itd~~l~~l~~~~~~ 122 (284)
T d2astb2 45 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRL-SDPIVNTLAKNS-NLVRLNLSGCSGFSEFALQTLLSSCSR 122 (284)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBC-CHHHHHHHTTCT-TCSEEECTTCBSCCHHHHHHHHHHCTT
T ss_pred CCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCC-CcHHHHHHhcCC-CCcCccccccccccccccchhhHHHHh
Confidence 468899999852223455566788899999999998753 222334556666 899999987 3442 3333467899
Q ss_pred ccEEEEEeec-CCCcchh-hhh-cCCCccEEEecCcc-C--CcceEecCCCCCcccEEEecccCcceee-EEccCCCCcc
Q 039786 79 LIRLGLELSG-LAEEPIR-VLQ-ASPNLLEILLTGTY-D--YELFHFEAGWFPKLQKLLLWDFIAVKSV-IIEKGAVPDI 151 (210)
Q Consensus 79 L~~L~l~~~~-l~~~~~~-~l~-~l~~L~~L~l~~~~-~--~~~~~~~~~~~~~L~~L~l~~~~~l~~~-~~~~~~~~~L 151 (210)
|++|++++|. +++.... .+. ..++|+.|+++.+. . ...+......+|+|+.|++.+|..+... ......+++|
T Consensus 123 L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L 202 (284)
T d2astb2 123 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYL 202 (284)
T ss_dssp CCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTC
T ss_pred ccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcC
Confidence 9999999986 6554443 333 35789999997442 1 1112222345789999999988766532 2234568999
Q ss_pred cEEEeccCCCCCc-ccccccccccccceeeecc
Q 039786 152 RELRIGPCPLLME-IPIGIEHLKNLKLLKFAGM 183 (210)
Q Consensus 152 ~~L~i~~~~~l~~-lp~~l~~l~~L~~l~l~~~ 183 (210)
++|++.+|..++. ....+..+++|++|++.+|
T Consensus 203 ~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 203 QHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp CEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 9999999986652 3344677899999999987
No 6
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.49 E-value=1.6e-13 Score=97.50 Aligned_cols=140 Identities=18% Similarity=0.204 Sum_probs=61.1
Q ss_pred hhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCccEEEEEeecCCCcchhhhhcCCCc
Q 039786 25 IANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLIRLGLELSGLAEEPIRVLQASPNL 103 (210)
Q Consensus 25 l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L 103 (210)
++.+++|++|++++|.... +..+..++ +|++|++.+ .+..++ .++.++.|+.|++.+|.... ...+..+++|
T Consensus 58 l~~l~nL~~L~Ls~N~l~~---~~~l~~l~-~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~~~~~~--~~~~~~l~~L 130 (199)
T d2omxa2 58 VEYLNNLTQINFSNNQLTD---ITPLKNLT-KLVDILMNNNQIADIT-PLANLTNLTGLTLFNNQITD--IDPLKNLTNL 130 (199)
T ss_dssp GGGCTTCCEEECCSSCCCC---CGGGTTCT-TCCEEECCSSCCCCCG-GGTTCTTCSEEECCSSCCCC--CGGGTTCTTC
T ss_pred cccCCCcCcCccccccccC---cccccCCc-cccccccccccccccc-cccccccccccccccccccc--ccccchhhhh
Confidence 4455555555555542211 11233444 555555554 333343 24455555555555554332 2234455555
Q ss_pred cEEEecCccCCcceEecCCCCCcccEEEecccCcceeeEEccCCCCcccEEEeccCCCCCcccccccccccccc
Q 039786 104 LEILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVIIEKGAVPDIRELRIGPCPLLMEIPIGIEHLKNLKL 177 (210)
Q Consensus 104 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~L~~L~i~~~~~l~~lp~~l~~l~~L~~ 177 (210)
+.|+++++.. ..+ .....+++++.|.+.++. +..++ ..+.+++|++|++++|. ++.++ .++.+++|++
T Consensus 131 ~~L~l~~n~l-~~~-~~l~~~~~L~~L~l~~n~-l~~l~-~l~~l~~L~~L~ls~N~-i~~i~-~l~~L~~L~~ 198 (199)
T d2omxa2 131 NRLELSSNTI-SDI-SALSGLTSLQQLNFSSNQ-VTDLK-PLANLTTLERLDISSNK-VSDIS-VLAKLTNLES 198 (199)
T ss_dssp SEEECCSSCC-CCC-GGGTTCTTCSEEECCSSC-CCCCG-GGTTCTTCCEEECCSSC-CCCCG-GGGGCTTCSE
T ss_pred HHhhhhhhhh-ccc-cccccccccccccccccc-ccCCc-cccCCCCCCEEECCCCC-CCCCc-cccCCCCCCc
Confidence 5555542211 111 122344555555555432 22221 12345555555555554 44443 3444444443
No 7
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.46 E-value=9.5e-14 Score=100.64 Aligned_cols=166 Identities=17% Similarity=0.180 Sum_probs=98.6
Q ss_pred CCCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCccE
Q 039786 3 LRQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLIR 81 (210)
Q Consensus 3 L~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~~ 81 (210)
|.+|++|++.+ .....+ +.++++++|++|++++|..... ..+..++ +++++.+.+ .++.++ .+..+++|+.
T Consensus 40 l~~L~~L~l~~--~~i~~l-~~l~~l~~L~~L~ls~n~i~~~---~~l~~l~-~l~~l~~~~n~~~~i~-~l~~l~~L~~ 111 (227)
T d1h6ua2 40 LDGITTLSAFG--TGVTTI-EGVQYLNNLIGLELKDNQITDL---APLKNLT-KITELELSGNPLKNVS-AIAGLQSIKT 111 (227)
T ss_dssp HHTCCEEECTT--SCCCCC-TTGGGCTTCCEEECCSSCCCCC---GGGTTCC-SCCEEECCSCCCSCCG-GGTTCTTCCE
T ss_pred cCCcCEEECCC--CCCCcc-hhHhcCCCCcEeecCCceeecc---ccccccc-cccccccccccccccc-cccccccccc
Confidence 56788888875 222333 4578888888888887644332 2355555 788888877 566665 4667788888
Q ss_pred EEEEeecCCCcchhhhhcCCCccEEEecCccCCcceEecCCCCCcccEEEecccCcceeeEEccCCCCcccEEEeccCCC
Q 039786 82 LGLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVIIEKGAVPDIRELRIGPCPL 161 (210)
Q Consensus 82 L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~L~~L~i~~~~~ 161 (210)
+++++|.... ...+...+.+..+.++++..... .....+++|+.|.+.++... .. ...+.+++|++|++++|.
T Consensus 112 l~l~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~Ls~n~- 184 (227)
T d1h6ua2 112 LDLTSTQITD--VTPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVS-DL-TPLANLSKLTTLKADDNK- 184 (227)
T ss_dssp EECTTSCCCC--CGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCC-CC-GGGTTCTTCCEEECCSSC-
T ss_pred cccccccccc--cchhccccchhhhhchhhhhchh--hhhccccccccccccccccc-cc-hhhcccccceecccCCCc-
Confidence 8887775433 23445566666666653321111 12234566677766655321 11 123456677777777664
Q ss_pred CCcccccccccccccceeeecch
Q 039786 162 LMEIPIGIEHLKNLKLLKFAGMV 184 (210)
Q Consensus 162 l~~lp~~l~~l~~L~~l~l~~~~ 184 (210)
++.++ .+..+++|++|++++|.
T Consensus 185 l~~l~-~l~~l~~L~~L~Ls~N~ 206 (227)
T d1h6ua2 185 ISDIS-PLASLPNLIEVHLKNNQ 206 (227)
T ss_dssp CCCCG-GGGGCTTCCEEECTTSC
T ss_pred cCCCh-hhcCCCCCCEEECcCCc
Confidence 55554 35666777777776664
No 8
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=5.1e-14 Score=104.52 Aligned_cols=173 Identities=20% Similarity=0.088 Sum_probs=123.4
Q ss_pred CCCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCccE
Q 039786 3 LRQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLIR 81 (210)
Q Consensus 3 L~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~~ 81 (210)
...+.+++.++ .....+|+.+. ++++.|++++|.. ...+...+..++ +|++|++.+ .++.+|. ++.+++|++
T Consensus 9 ~~~~~~v~C~~--~~L~~iP~~lp--~~l~~L~Ls~N~i-~~l~~~~f~~l~-~L~~L~L~~N~l~~l~~-~~~l~~L~~ 81 (266)
T d1p9ag_ 9 VASHLEVNCDK--RNLTALPPDLP--KDTTILHLSENLL-YTFSLATLMPYT-RLTQLNLDRAELTKLQV-DGTLPVLGT 81 (266)
T ss_dssp STTCCEEECTT--SCCSSCCSCCC--TTCCEEECTTSCC-SEEEGGGGTTCT-TCCEEECTTSCCCEEEC-CSCCTTCCE
T ss_pred cCCCeEEEccC--CCCCeeCcCcC--cCCCEEECcCCcC-CCcCHHHhhccc-ccccccccccccccccc-ccccccccc
Confidence 34455555543 23334444332 5899999998644 444445677787 999999998 7888773 578999999
Q ss_pred EEEEeecCCCcchhhhhcCCCccEEEecCccCCcceEecCCCCCcccEEEecccCcceeeEEc-cCCCCcccEEEeccCC
Q 039786 82 LGLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVIIE-KGAVPDIRELRIGPCP 160 (210)
Q Consensus 82 L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~-~~~~~~L~~L~i~~~~ 160 (210)
|++++|.++.. ...+..+++|++|+++.+............+++++.|.+.++. +..++.. ...+++|+.+++.+|.
T Consensus 82 L~Ls~N~l~~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~-l~~l~~~~~~~l~~l~~l~l~~N~ 159 (266)
T d1p9ag_ 82 LDLSHNQLQSL-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE-LKTLPPGLLTPTPKLEKLSLANNN 159 (266)
T ss_dssp EECCSSCCSSC-CCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECTTSC
T ss_pred ccccccccccc-ccccccccccccccccccccceeeccccccccccccccccccc-cceeccccccccccchhccccccc
Confidence 99999998664 4467889999999998544333233344567889999998764 3444332 2457899999999997
Q ss_pred CCCcccc-cccccccccceeeecchH
Q 039786 161 LLMEIPI-GIEHLKNLKLLKFAGMVK 185 (210)
Q Consensus 161 ~l~~lp~-~l~~l~~L~~l~l~~~~~ 185 (210)
++.+|. .+..+++|++|+++++..
T Consensus 160 -l~~~~~~~~~~l~~L~~L~Ls~N~L 184 (266)
T d1p9ag_ 160 -LTELPAGLLNGLENLDTLLLQENSL 184 (266)
T ss_dssp -CSCCCTTTTTTCTTCCEEECCSSCC
T ss_pred -ccccCccccccccccceeecccCCC
Confidence 666654 468899999999999753
No 9
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.44 E-value=4.4e-13 Score=97.05 Aligned_cols=165 Identities=18% Similarity=0.239 Sum_probs=122.1
Q ss_pred CCCCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCcc
Q 039786 2 KLRQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLI 80 (210)
Q Consensus 2 ~L~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~ 80 (210)
+|++|++|++++ .. ...+ ..++.+++++.++++++... .+..+..++ +|+.+.+.+ ....++ .+...+.++
T Consensus 61 ~l~~L~~L~ls~-n~-i~~~-~~l~~l~~l~~l~~~~n~~~---~i~~l~~l~-~L~~l~l~~~~~~~~~-~~~~~~~~~ 132 (227)
T d1h6ua2 61 YLNNLIGLELKD-NQ-ITDL-APLKNLTKITELELSGNPLK---NVSAIAGLQ-SIKTLDLTSTQITDVT-PLAGLSNLQ 132 (227)
T ss_dssp GCTTCCEEECCS-SC-CCCC-GGGTTCCSCCEEECCSCCCS---CCGGGTTCT-TCCEEECTTSCCCCCG-GGTTCTTCC
T ss_pred cCCCCcEeecCC-ce-eecc-cccccccccccccccccccc---ccccccccc-cccccccccccccccc-hhccccchh
Confidence 689999999996 22 2222 23789999999999886543 234566676 899999987 444443 456678999
Q ss_pred EEEEEeecCCCcchhhhhcCCCccEEEecCccCCcceEecCCCCCcccEEEecccCcceeeEEccCCCCcccEEEeccCC
Q 039786 81 RLGLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVIIEKGAVPDIRELRIGPCP 160 (210)
Q Consensus 81 ~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~L~~L~i~~~~ 160 (210)
.+.+.++.+.. ...+..+++|+.|.+.++.... ......+++|+.|++.++. +..++ ..+.+++|++|++++|.
T Consensus 133 ~l~~~~~~~~~--~~~~~~~~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~Ls~n~-l~~l~-~l~~l~~L~~L~Ls~N~ 206 (227)
T d1h6ua2 133 VLYLDLNQITN--ISPLAGLTNLQYLSIGNAQVSD--LTPLANLSKLTTLKADDNK-ISDIS-PLASLPNLIEVHLKNNQ 206 (227)
T ss_dssp EEECCSSCCCC--CGGGGGCTTCCEEECCSSCCCC--CGGGTTCTTCCEEECCSSC-CCCCG-GGGGCTTCCEEECTTSC
T ss_pred hhhchhhhhch--hhhhcccccccccccccccccc--chhhcccccceecccCCCc-cCCCh-hhcCCCCCCEEECcCCc
Confidence 99998887655 3457789999999998543222 1235678999999999874 55543 24578999999999996
Q ss_pred CCCcccccccccccccceeeec
Q 039786 161 LLMEIPIGIEHLKNLKLLKFAG 182 (210)
Q Consensus 161 ~l~~lp~~l~~l~~L~~l~l~~ 182 (210)
++.++ .++.+++|+.|++++
T Consensus 207 -lt~i~-~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 207 -ISDVS-PLANTSNLFIVTLTN 226 (227)
T ss_dssp -CCBCG-GGTTCTTCCEEEEEE
T ss_pred -CCCCc-ccccCCCCCEEEeeC
Confidence 78777 478999999999875
No 10
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.41 E-value=3.6e-13 Score=101.64 Aligned_cols=37 Identities=22% Similarity=0.442 Sum_probs=28.3
Q ss_pred CCCcccEEEeccCCCCCcccccccccccccceeeecch
Q 039786 147 AVPDIRELRIGPCPLLMEIPIGIEHLKNLKLLKFAGMV 184 (210)
Q Consensus 147 ~~~~L~~L~i~~~~~l~~lp~~l~~l~~L~~l~l~~~~ 184 (210)
.+++|++|++++|. ++.+|.++..+++|++|+++++.
T Consensus 217 ~l~~L~~L~L~~N~-L~~lp~~l~~l~~L~~L~Ls~N~ 253 (305)
T d1xkua_ 217 NTPHLRELHLNNNK-LVKVPGGLADHKYIQVVYLHNNN 253 (305)
T ss_dssp GSTTCCEEECCSSC-CSSCCTTTTTCSSCCEEECCSSC
T ss_pred ccccceeeeccccc-ccccccccccccCCCEEECCCCc
Confidence 45778888888876 67777777788888888887764
No 11
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.41 E-value=5.2e-13 Score=94.78 Aligned_cols=147 Identities=12% Similarity=0.177 Sum_probs=113.2
Q ss_pred hcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCccEEEEEeecCCCcchhhhhcCCCcc
Q 039786 26 ANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLIRLGLELSGLAEEPIRVLQASPNLL 104 (210)
Q Consensus 26 ~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~ 104 (210)
+.+.++++|++.++.... ++++..++ +|++|++++ .++.++. ++.+++|++|++..|.+... ..+++++.|+
T Consensus 37 ~~l~~l~~L~l~~~~i~~---l~~l~~l~-nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~ 109 (199)
T d2omxa2 37 TDLDQVTTLQADRLGIKS---IDGVEYLN-NLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADI--TPLANLTNLT 109 (199)
T ss_dssp HHHTTCCEEECTTSCCCC---CTTGGGCT-TCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCS
T ss_pred HHhcCCCEEECCCCCCCC---ccccccCC-CcCcCccccccccCccc-ccCCcccccccccccccccc--cccccccccc
Confidence 456889999998865432 34566677 999999998 7887774 88999999999999986553 4688999999
Q ss_pred EEEecCccCCcceEecCCCCCcccEEEecccCcceeeEEccCCCCcccEEEeccCCCCCcccccccccccccceeeecch
Q 039786 105 EILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVIIEKGAVPDIRELRIGPCPLLMEIPIGIEHLKNLKLLKFAGMV 184 (210)
Q Consensus 105 ~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~L~~L~i~~~~~l~~lp~~l~~l~~L~~l~l~~~~ 184 (210)
.|+++++.... ......+++|+.+++.++. +..++ ....+++|+.|++.+|. ++.++ .++.+++|++|+++++.
T Consensus 110 ~L~l~~~~~~~--~~~~~~l~~L~~L~l~~n~-l~~~~-~l~~~~~L~~L~l~~n~-l~~l~-~l~~l~~L~~L~ls~N~ 183 (199)
T d2omxa2 110 GLTLFNNQITD--IDPLKNLTNLNRLELSSNT-ISDIS-ALSGLTSLQQLNFSSNQ-VTDLK-PLANLTTLERLDISSNK 183 (199)
T ss_dssp EEECCSSCCCC--CGGGTTCTTCSEEECCSSC-CCCCG-GGTTCTTCSEEECCSSC-CCCCG-GGTTCTTCCEEECCSSC
T ss_pred ccccccccccc--ccccchhhhhHHhhhhhhh-hcccc-ccccccccccccccccc-ccCCc-cccCCCCCCEEECCCCC
Confidence 99998554322 1235678999999998764 33332 35678999999999987 66665 47899999999999985
Q ss_pred H
Q 039786 185 K 185 (210)
Q Consensus 185 ~ 185 (210)
.
T Consensus 184 i 184 (199)
T d2omxa2 184 V 184 (199)
T ss_dssp C
T ss_pred C
Confidence 4
No 12
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=8.4e-13 Score=98.68 Aligned_cols=152 Identities=15% Similarity=0.084 Sum_probs=97.0
Q ss_pred CCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCC--------------------------hhhhcCCCccE
Q 039786 29 KNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLP--------------------------DWIFKLKNLIR 81 (210)
Q Consensus 29 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p--------------------------~~~~~l~~L~~ 81 (210)
+++++|+|++|.. ...+...+..++ +|++|++.+ .+..++ ..+..+++|++
T Consensus 32 ~~~~~L~Ls~N~i-~~i~~~~f~~l~-~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~ 109 (284)
T d1ozna_ 32 AASQRIFLHGNRI-SHVPAASFRACR-NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (284)
T ss_dssp TTCSEEECTTSCC-CEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCCEEECcCCcC-CCCCHHHhhccc-cccccccccccccccccccccccccccccccccccccccccchhhcccccCCE
Confidence 5789999998654 444445677777 899999876 543322 23345566777
Q ss_pred EEEEeecCCCcchhhhhcCCCccEEEecCccCCcceE-ecCCCCCcccEEEecccCcceeeEEc-cCCCCcccEEEeccC
Q 039786 82 LGLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFH-FEAGWFPKLQKLLLWDFIAVKSVIIE-KGAVPDIRELRIGPC 159 (210)
Q Consensus 82 L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~~~~l~~~~~~-~~~~~~L~~L~i~~~ 159 (210)
|++..|.+.......++.+++|+.++++...- ..++ .....+++|+.|++.++. +..++.. ...+++|+.+++.+|
T Consensus 110 L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l-~~i~~~~f~~~~~L~~L~l~~N~-l~~l~~~~f~~l~~L~~l~l~~N 187 (284)
T d1ozna_ 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNAL-QALPDDTFRDLGNLTHLFLHGNR-ISSVPERAFRGLHSLDRLLLHQN 187 (284)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCC-CCCCTTTTTTCTTCCEEECCSSC-CCEECTTTTTTCTTCCEEECCSS
T ss_pred EecCCcccccccccccchhcccchhhhccccc-cccChhHhccccchhhcccccCc-ccccchhhhccccccchhhhhhc
Confidence 77777665555455556667777777662221 1121 123455678888887664 4444322 235678888888888
Q ss_pred CCCCcccccccccccccceeeecch
Q 039786 160 PLLMEIPIGIEHLKNLKLLKFAGMV 184 (210)
Q Consensus 160 ~~l~~lp~~l~~l~~L~~l~l~~~~ 184 (210)
......|..+..+++|++|+++++.
T Consensus 188 ~l~~i~~~~f~~l~~L~~L~l~~N~ 212 (284)
T d1ozna_ 188 RVAHVHPHAFRDLGRLMTLYLFANN 212 (284)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSC
T ss_pred cccccChhHhhhhhhcccccccccc
Confidence 7444446777888899999988864
No 13
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.38 E-value=3.7e-13 Score=96.36 Aligned_cols=146 Identities=16% Similarity=0.216 Sum_probs=109.5
Q ss_pred cCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCccEEEEEeecCCCcchhhhhcCCCccE
Q 039786 27 NLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLIRLGLELSGLAEEPIRVLQASPNLLE 105 (210)
Q Consensus 27 ~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~ 105 (210)
.+.+|++|++.++.... +.++..++ +|++|++++ .++.++ .++.+++|++|++++|.++. +..+..+++|+.
T Consensus 44 ~L~~L~~L~l~~~~i~~---l~~l~~l~-~L~~L~L~~n~i~~l~-~~~~l~~L~~L~l~~n~i~~--l~~l~~l~~L~~ 116 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKS---VQGIQYLP-NVTKLFLNGNKLTDIK-PLANLKNLGWLFLDENKVKD--LSSLKDLKKLKS 116 (210)
T ss_dssp HHHTCCEEECTTSCCCC---CTTGGGCT-TCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCC--GGGGTTCTTCCE
T ss_pred HhcCccEEECcCCCCCC---chhHhhCC-CCCEEeCCCccccCcc-ccccCccccccccccccccc--cccccccccccc
Confidence 45688899998764433 33456666 999999999 788877 46889999999999999876 446889999999
Q ss_pred EEecCccCCcceEecCCCCCcccEEEecccCcceeeEEccCCCCcccEEEeccCCCCCcccccccccccccceeeecchH
Q 039786 106 ILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVIIEKGAVPDIRELRIGPCPLLMEIPIGIEHLKNLKLLKFAGMVK 185 (210)
Q Consensus 106 L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~L~~L~i~~~~~l~~lp~~l~~l~~L~~l~l~~~~~ 185 (210)
|++.++.... + .....++.++.+.+.++.. .... ....+++|+.+++.+|. ++.++ .+..+++|++|+++++..
T Consensus 117 L~l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l-~~~~-~~~~l~~L~~l~l~~n~-l~~i~-~l~~l~~L~~L~Ls~N~i 190 (210)
T d1h6ta2 117 LSLEHNGISD-I-NGLVHLPQLESLYLGNNKI-TDIT-VLSRLTKLDTLSLEDNQ-ISDIV-PLAGLTKLQNLYLSKNHI 190 (210)
T ss_dssp EECTTSCCCC-C-GGGGGCTTCCEEECCSSCC-CCCG-GGGGCTTCSEEECCSSC-CCCCG-GGTTCTTCCEEECCSSCC
T ss_pred cccccccccc-c-ccccccccccccccccccc-cccc-ccccccccccccccccc-ccccc-cccCCCCCCEEECCCCCC
Confidence 9998543222 1 1345567889998876542 2222 24468999999999997 66665 478899999999998854
No 14
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.38 E-value=1.3e-12 Score=101.19 Aligned_cols=167 Identities=17% Similarity=0.196 Sum_probs=82.6
Q ss_pred CCCCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCcc
Q 039786 2 KLRQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLI 80 (210)
Q Consensus 2 ~L~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~ 80 (210)
.+++++.+++++ .....+. ..+..++|+.|++.+|.... +..+..++ +|+.|++.+ .++.++ .++.+++|+
T Consensus 195 ~l~~~~~l~l~~--n~i~~~~-~~~~~~~L~~L~l~~n~l~~---~~~l~~l~-~L~~L~l~~n~l~~~~-~~~~~~~L~ 266 (384)
T d2omza2 195 KLTNLESLIATN--NQISDIT-PLGILTNLDELSLNGNQLKD---IGTLASLT-NLTDLDLANNQISNLA-PLSGLTKLT 266 (384)
T ss_dssp GCTTCSEEECCS--SCCCCCG-GGGGCTTCCEEECCSSCCCC---CGGGGGCT-TCSEEECCSSCCCCCG-GGTTCTTCS
T ss_pred cccccceeeccC--CccCCCC-cccccCCCCEEECCCCCCCC---cchhhccc-ccchhccccCccCCCC-cccccccCC
Confidence 356666776664 1112221 23555677777776653322 22344444 667777666 555554 355566777
Q ss_pred EEEEEeecCCCcchhhhhcCCCccEEEecCccCCcceEecCCCCCcccEEEecccCcceeeEEccCCCCcccEEEeccCC
Q 039786 81 RLGLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVIIEKGAVPDIRELRIGPCP 160 (210)
Q Consensus 81 ~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~L~~L~i~~~~ 160 (210)
.|+++++.++.. ..+..++.++.+.+..+.... + .....+++++.+++.++. +..++ ....+++|++|++.+|.
T Consensus 267 ~L~l~~~~l~~~--~~~~~~~~l~~l~~~~n~l~~-~-~~~~~~~~l~~L~ls~n~-l~~l~-~l~~l~~L~~L~L~~n~ 340 (384)
T d2omza2 267 ELKLGANQISNI--SPLAGLTALTNLELNENQLED-I-SPISNLKNLTYLTLYFNN-ISDIS-PVSSLTKLQRLFFANNK 340 (384)
T ss_dssp EEECCSSCCCCC--GGGTTCTTCSEEECCSSCCSC-C-GGGGGCTTCSEEECCSSC-CSCCG-GGGGCTTCCEEECCSSC
T ss_pred EeeccCcccCCC--Ccccccccccccccccccccc-c-cccchhcccCeEECCCCC-CCCCc-ccccCCCCCEEECCCCC
Confidence 777766665442 234455555555554221111 1 112334555555555442 22221 12345555555555554
Q ss_pred CCCcccccccccccccceeeecch
Q 039786 161 LLMEIPIGIEHLKNLKLLKFAGMV 184 (210)
Q Consensus 161 ~l~~lp~~l~~l~~L~~l~l~~~~ 184 (210)
++.++ ++..+++|++|+++++.
T Consensus 341 -l~~l~-~l~~l~~L~~L~l~~N~ 362 (384)
T d2omza2 341 -VSDVS-SLANLTNINWLSAGHNQ 362 (384)
T ss_dssp -CCCCG-GGGGCTTCCEEECCSSC
T ss_pred -CCCCh-hHcCCCCCCEEECCCCc
Confidence 44443 35555555555555543
No 15
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.36 E-value=1.9e-12 Score=97.92 Aligned_cols=178 Identities=18% Similarity=0.182 Sum_probs=121.0
Q ss_pred CCCcEEEEEe-cCCCcchHHHHhhcCCCCceEEEEecC-cccccccccccCCccCceEEEeec-cCcc-CChhhhcCCCc
Q 039786 4 RQLRKLSIRP-QNGNGKDLCGLIANLKNLESLTVEMTS-KEEILDLLSLSSPPQYLQRLYLTG-NMKK-LPDWIFKLKNL 79 (210)
Q Consensus 4 ~~L~~L~l~~-~~~~~~~~~~~l~~l~~L~~L~l~~~~-~~~~~~~~~~~~~~~~L~~L~l~~-~~~~-~p~~~~~l~~L 79 (210)
.+++.|++++ .......++++++++++|++|++++++ ..+..+ ..+..++ +|++|++++ .+.. .+..+..++.|
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP-~~i~~L~-~L~~L~Ls~N~l~~~~~~~~~~~~~L 127 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIP-PAIAKLT-QLHYLYITHTNVSGAIPDFLSQIKTL 127 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCC-GGGGGCT-TCSEEEEEEECCEEECCGGGGGCTTC
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccc-ccccccc-ccchhhhccccccccccccccchhhh
Confidence 3688899986 222233577899999999999998754 333333 4577777 999999998 6776 45567889999
Q ss_pred cEEEEEeecCCCcchhhhhcCCCccEEEecCccCCcceEecCCCCCcc-cEEEecccC----------------------
Q 039786 80 IRLGLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFHFEAGWFPKL-QKLLLWDFI---------------------- 136 (210)
Q Consensus 80 ~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L-~~L~l~~~~---------------------- 136 (210)
+++++..|.+....+..++.++.++.++++++.....++.....++.+ +.+.+.++.
T Consensus 128 ~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~~l~l~~~ 207 (313)
T d1ogqa_ 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRN 207 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSS
T ss_pred cccccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999998766666789999999999998443222222222333333 444433221
Q ss_pred -cceeeEEccCCCCcccEEEeccCCCCCcccccccccccccceeeecch
Q 039786 137 -AVKSVIIEKGAVPDIRELRIGPCPLLMEIPIGIEHLKNLKLLKFAGMV 184 (210)
Q Consensus 137 -~l~~~~~~~~~~~~L~~L~i~~~~~l~~lp~~l~~l~~L~~l~l~~~~ 184 (210)
.....+...+.+++++.+++.+|. +...+..+..+++|+.|+++++.
T Consensus 208 ~~~~~~~~~~~~~~~l~~l~~~~~~-l~~~~~~~~~~~~L~~L~Ls~N~ 255 (313)
T d1ogqa_ 208 MLEGDASVLFGSDKNTQKIHLAKNS-LAFDLGKVGLSKNLNGLDLRNNR 255 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSE-ECCBGGGCCCCTTCCEEECCSSC
T ss_pred ccccccccccccccccccccccccc-ccccccccccccccccccCccCe
Confidence 111112223456888999988887 44445567888999999998864
No 16
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.35 E-value=2.1e-12 Score=97.38 Aligned_cols=108 Identities=13% Similarity=-0.028 Sum_probs=72.6
Q ss_pred CCCccEEEEEeecCCCcchhhhhcCCCccEEEecCccCCcceEecCCCCCcccEEEecccCcceeeEEccCCCCcccEEE
Q 039786 76 LKNLIRLGLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVIIEKGAVPDIRELR 155 (210)
Q Consensus 76 l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~L~~L~ 155 (210)
+++|+.|++.+|.........+.+++.+++|+++++............+++|++|++.++. +..++.....+++|++|+
T Consensus 170 ~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~-L~~lp~~l~~l~~L~~L~ 248 (305)
T d1xkua_ 170 PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK-LVKVPGGLADHKYIQVVY 248 (305)
T ss_dssp CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSC-CSSCCTTTTTCSSCCEEE
T ss_pred CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccc-ccccccccccccCCCEEE
Confidence 3556666666555544445566677777777776332222112223456899999999874 566665666799999999
Q ss_pred eccCCCCCccccc-------ccccccccceeeecchH
Q 039786 156 IGPCPLLMEIPIG-------IEHLKNLKLLKFAGMVK 185 (210)
Q Consensus 156 i~~~~~l~~lp~~-------l~~l~~L~~l~l~~~~~ 185 (210)
+++|. ++.++.. .....+|+.+++.+++.
T Consensus 249 Ls~N~-i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~ 284 (305)
T d1xkua_ 249 LHNNN-ISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284 (305)
T ss_dssp CCSSC-CCCCCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred CCCCc-cCccChhhccCcchhcccCCCCEEECCCCcC
Confidence 99987 7766543 23568899999999874
No 17
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=1.1e-13 Score=103.60 Aligned_cols=157 Identities=20% Similarity=0.191 Sum_probs=111.0
Q ss_pred CCCCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCcccccccccc-cCCccCceEEEeec--cCcc--CChhhh-c
Q 039786 2 KLRQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSL-SSPPQYLQRLYLTG--NMKK--LPDWIF-K 75 (210)
Q Consensus 2 ~L~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~-~~~~~~L~~L~l~~--~~~~--~p~~~~-~ 75 (210)
++++|++|++++ ....+.....++++++|++|++++|.......+..+ ..++ +|++|++.+ .++. ++..+. .
T Consensus 69 ~c~~L~~L~L~~-~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~-~L~~L~ls~c~~~~~~~~~~~~~~~ 146 (284)
T d2astb2 69 QCSKLQNLSLEG-LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS-RLDELNLSWCFDFTEKHVQVAVAHV 146 (284)
T ss_dssp TBCCCSEEECTT-CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCT-TCCEEECCCCTTCCHHHHHHHHHHS
T ss_pred hCCCcccccccc-cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHH-hccccccccccccccccchhhhccc
Confidence 678999999986 445567778899999999999998876554433333 2345 899999987 3332 332333 3
Q ss_pred CCCccEEEEEeec--CCCcchhhh-hcCCCccEEEecCccCC-cceEecCCCCCcccEEEecccCcceeeE-EccCCCCc
Q 039786 76 LKNLIRLGLELSG--LAEEPIRVL-QASPNLLEILLTGTYDY-ELFHFEAGWFPKLQKLLLWDFIAVKSVI-IEKGAVPD 150 (210)
Q Consensus 76 l~~L~~L~l~~~~--l~~~~~~~l-~~l~~L~~L~l~~~~~~-~~~~~~~~~~~~L~~L~l~~~~~l~~~~-~~~~~~~~ 150 (210)
.++|+.|++.+|. ++...+..+ ..+|+|++|+++.|... +........+++|+.|++.+|..+.... ...+.+++
T Consensus 147 ~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~ 226 (284)
T d2astb2 147 SETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPT 226 (284)
T ss_dssp CTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTT
T ss_pred ccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCC
Confidence 5799999999863 555555544 47899999999865432 2222334568999999999998765322 22356899
Q ss_pred ccEEEeccCC
Q 039786 151 IRELRIGPCP 160 (210)
Q Consensus 151 L~~L~i~~~~ 160 (210)
|+.|++.+|.
T Consensus 227 L~~L~l~~~~ 236 (284)
T d2astb2 227 LKTLQVFGIV 236 (284)
T ss_dssp CCEEECTTSS
T ss_pred CCEEeeeCCC
Confidence 9999999884
No 18
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=3.5e-13 Score=92.53 Aligned_cols=125 Identities=13% Similarity=0.084 Sum_probs=86.1
Q ss_pred CceEEEeec-cCccCChhhhcCCCccEEEEEeecCCCcchhhhhcCCCccEEEecCccCCcceEec-CCCCCcccEEEec
Q 039786 56 YLQRLYLTG-NMKKLPDWIFKLKNLIRLGLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFHFE-AGWFPKLQKLLLW 133 (210)
Q Consensus 56 ~L~~L~l~~-~~~~~p~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~-~~~~~~L~~L~l~ 133 (210)
++++|++++ .++.+|.....+++|++|++++|.++.. ..++.+++|+.|+++++... .+... ...+++|+.|++.
T Consensus 19 ~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~-~l~~~~~~~l~~L~~L~L~ 95 (162)
T d1a9na_ 19 RDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILT 95 (162)
T ss_dssp SCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECC
T ss_pred cCcEEECCCCCCCccCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhccccccc-CCCccccccccccccceec
Confidence 688888888 7777776667778888888888877653 45677888888888744322 22211 2356788888887
Q ss_pred ccCcceeeE--EccCCCCcccEEEeccCCCCCcccc----cccccccccceeeecchH
Q 039786 134 DFIAVKSVI--IEKGAVPDIRELRIGPCPLLMEIPI----GIEHLKNLKLLKFAGMVK 185 (210)
Q Consensus 134 ~~~~l~~~~--~~~~~~~~L~~L~i~~~~~l~~lp~----~l~~l~~L~~l~l~~~~~ 185 (210)
++. +..++ .....+++|++|++.+|+ +...|. .+..+++|+.|+-.....
T Consensus 96 ~N~-i~~~~~l~~l~~l~~L~~L~l~~N~-i~~~~~~r~~~i~~lp~L~~LD~~~i~~ 151 (162)
T d1a9na_ 96 NNS-LVELGDLDPLASLKSLTYLCILRNP-VTNKKHYRLYVIYKVPQVRVLDFQKVKL 151 (162)
T ss_dssp SCC-CCCGGGGGGGGGCTTCCEEECCSSG-GGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred ccc-ccccccccccccccccchhhcCCCc-cccccchHHHHHHHCCCcCeeCCCCCCH
Confidence 764 22222 123468999999999998 555553 467889999998776554
No 19
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=6.6e-11 Score=85.98 Aligned_cols=174 Identities=16% Similarity=0.158 Sum_probs=107.5
Q ss_pred CCCcEEEEEecCCCcchHH-HHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec--cCcc-CChhhhcCCCc
Q 039786 4 RQLRKLSIRPQNGNGKDLC-GLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG--NMKK-LPDWIFKLKNL 79 (210)
Q Consensus 4 ~~L~~L~l~~~~~~~~~~~-~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~--~~~~-~p~~~~~l~~L 79 (210)
+++++|++++ .....++ .++.++++|++|++++|......+...+..++ +++++.+.. .+.. .+.++..+++|
T Consensus 29 ~~l~~L~Ls~--n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~-~l~~l~~~~~n~l~~~~~~~~~~l~~L 105 (242)
T d1xwdc1 29 RNAIELRFVL--TKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLP-KLHEIRIEKANNLLYINPEAFQNLPNL 105 (242)
T ss_dssp SCCSEEEEES--CCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCT-TCCEEEEECCTTCCEECTTSEECCTTC
T ss_pred CCCCEEECcC--CcCCccChhHhhccchhhhhhhccccccceeecccccccc-ccccccccccccccccccccccccccc
Confidence 3789999986 2223333 45788999999999987665555555666676 788887754 4544 44567889999
Q ss_pred cEEEEEeecCCCcch-hhhhcCCCccEEEecCccCCcceEecCCCC----CcccEEEecccCcceeeEEccCCCCcccEE
Q 039786 80 IRLGLELSGLAEEPI-RVLQASPNLLEILLTGTYDYELFHFEAGWF----PKLQKLLLWDFIAVKSVIIEKGAVPDIREL 154 (210)
Q Consensus 80 ~~L~l~~~~l~~~~~-~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~----~~L~~L~l~~~~~l~~~~~~~~~~~~L~~L 154 (210)
+++++.+|.+...+. .....++.+..+...+.. .. .+....| ..++.+++.++ .+..++......++++.+
T Consensus 106 ~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~-l~--~i~~~~~~~~~~~l~~L~l~~n-~l~~i~~~~~~~~~l~~~ 181 (242)
T d1xwdc1 106 QYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNIN-IH--TIERNSFVGLSFESVILWLNKN-GIQEIHNCAFNGTQLDEL 181 (242)
T ss_dssp CEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTT-CC--EECTTSSTTSBSSCEEEECCSS-CCCEECTTTTTTCCEEEE
T ss_pred cccccchhhhcccccccccccccccccccccccc-cc--cccccccccccccceeeecccc-cccccccccccchhhhcc
Confidence 999999998765432 223344444444433221 11 1222222 25566766543 244444333345566666
Q ss_pred EeccCCCCCccccc-ccccccccceeeecch
Q 039786 155 RIGPCPLLMEIPIG-IEHLKNLKLLKFAGMV 184 (210)
Q Consensus 155 ~i~~~~~l~~lp~~-l~~l~~L~~l~l~~~~ 184 (210)
....+..++.+|.. +..+++|++|+++++.
T Consensus 182 ~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~ 212 (242)
T d1xwdc1 182 NLSDNNNLEELPNDVFHGASGPVILDISRTR 212 (242)
T ss_dssp ECTTCTTCCCCCTTTTTTSCCCSEEECTTSC
T ss_pred ccccccccccccHHHhcCCCCCCEEECCCCc
Confidence 65555557777665 4778888888887764
No 20
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.24 E-value=1.8e-11 Score=94.62 Aligned_cols=166 Identities=22% Similarity=0.243 Sum_probs=121.6
Q ss_pred CCCCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCcc
Q 039786 2 KLRQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLI 80 (210)
Q Consensus 2 ~L~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~ 80 (210)
.+++|++|++++ ..... .+.++.+++|+.+++.+|..... ..+..++ +|+.|++.+ .++.++ .+..++.++
T Consensus 217 ~~~~L~~L~l~~--n~l~~-~~~l~~l~~L~~L~l~~n~l~~~---~~~~~~~-~L~~L~l~~~~l~~~~-~~~~~~~l~ 288 (384)
T d2omza2 217 ILTNLDELSLNG--NQLKD-IGTLASLTNLTDLDLANNQISNL---APLSGLT-KLTELKLGANQISNIS-PLAGLTALT 288 (384)
T ss_dssp GCTTCCEEECCS--SCCCC-CGGGGGCTTCSEEECCSSCCCCC---GGGTTCT-TCSEEECCSSCCCCCG-GGTTCTTCS
T ss_pred ccCCCCEEECCC--CCCCC-cchhhcccccchhccccCccCCC---Ccccccc-cCCEeeccCcccCCCC-ccccccccc
Confidence 357899999986 22222 24578889999999998654433 2355566 899999988 777776 466788999
Q ss_pred EEEEEeecCCCcchhhhhcCCCccEEEecCccCCcceEecCCCCCcccEEEecccCcceeeEEccCCCCcccEEEeccCC
Q 039786 81 RLGLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVIIEKGAVPDIRELRIGPCP 160 (210)
Q Consensus 81 ~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~L~~L~i~~~~ 160 (210)
.+++..|.+.. +..+..+++++.|+++.+... .+. ....+++|++|++.+|. +..++ ..+.+++|++|++++|.
T Consensus 289 ~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~-~l~-~l~~l~~L~~L~L~~n~-l~~l~-~l~~l~~L~~L~l~~N~ 362 (384)
T d2omza2 289 NLELNENQLED--ISPISNLKNLTYLTLYFNNIS-DIS-PVSSLTKLQRLFFANNK-VSDVS-SLANLTNINWLSAGHNQ 362 (384)
T ss_dssp EEECCSSCCSC--CGGGGGCTTCSEEECCSSCCS-CCG-GGGGCTTCCEEECCSSC-CCCCG-GGGGCTTCCEEECCSSC
T ss_pred ccccccccccc--ccccchhcccCeEECCCCCCC-CCc-ccccCCCCCEEECCCCC-CCCCh-hHcCCCCCCEEECCCCc
Confidence 99999888765 446788999999999844222 221 35678999999999874 44443 35568999999999887
Q ss_pred CCCcccccccccccccceeeecc
Q 039786 161 LLMEIPIGIEHLKNLKLLKFAGM 183 (210)
Q Consensus 161 ~l~~lp~~l~~l~~L~~l~l~~~ 183 (210)
++.++. +..+++|++|+++++
T Consensus 363 -l~~l~~-l~~l~~L~~L~L~~N 383 (384)
T d2omza2 363 -ISDLTP-LANLTRITQLGLNDQ 383 (384)
T ss_dssp -CCBCGG-GTTCTTCSEEECCCE
T ss_pred -CCCChh-hccCCCCCEeeCCCC
Confidence 676663 788999999998764
No 21
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=7.5e-11 Score=85.67 Aligned_cols=177 Identities=18% Similarity=0.154 Sum_probs=113.4
Q ss_pred CCCCCcEEEEEecCCCcchH-HHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCCh--hhhcCC
Q 039786 2 KLRQLRKLSIRPQNGNGKDL-CGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPD--WIFKLK 77 (210)
Q Consensus 2 ~L~~L~~L~l~~~~~~~~~~-~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~--~~~~l~ 77 (210)
++++|++|++++ ......+ ...+..+++++.+.+..++.....+...+..++ +|+++.+.+ .+...+. +...++
T Consensus 51 ~l~~L~~L~ls~-n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~-~L~~l~l~~~~l~~~~~~~~~~~l~ 128 (242)
T d1xwdc1 51 GFGDLEKIEISQ-NDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLP-NLQYLLISNTGIKHLPDVHKIHSLQ 128 (242)
T ss_dssp TCTTCCEEEEES-CTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCT-TCCEEEEESCCCCSCCCCTTTCBSS
T ss_pred ccchhhhhhhcc-ccccceeeccccccccccccccccccccccccccccccccc-cccccccchhhhccccccccccccc
Confidence 589999999996 2222222 345678899999999876655555556677777 999999998 6766553 233445
Q ss_pred CccEEEEEeecCCCcchhhhhcC-CCccEEEecCccCCcceEecCCCCCcccEEEecccCcceeeEEc-cCCCCcccEEE
Q 039786 78 NLIRLGLELSGLAEEPIRVLQAS-PNLLEILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVIIE-KGAVPDIRELR 155 (210)
Q Consensus 78 ~L~~L~l~~~~l~~~~~~~l~~l-~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~-~~~~~~L~~L~ 155 (210)
.+..+...++.+...+...+.++ ..+..|++.+.. ...+.......+++..+....+..+..++.. ...+++|+.|+
T Consensus 129 ~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~-l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~ 207 (242)
T d1xwdc1 129 KVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG-IQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILD 207 (242)
T ss_dssp CEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC-CCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEE
T ss_pred ccccccccccccccccccccccccccceeeeccccc-ccccccccccchhhhccccccccccccccHHHhcCCCCCCEEE
Confidence 55544444545555554555555 477888876332 1223222223355666655555556666543 35689999999
Q ss_pred eccCCCCCccccc-ccccccccceeeec
Q 039786 156 IGPCPLLMEIPIG-IEHLKNLKLLKFAG 182 (210)
Q Consensus 156 i~~~~~l~~lp~~-l~~l~~L~~l~l~~ 182 (210)
+.+|. ++.+|.. +..+++|+.+++.+
T Consensus 208 Ls~N~-l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 208 ISRTR-IHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp CTTSC-CCCCCSSSCTTCCEEESSSEES
T ss_pred CCCCc-CCccCHHHHcCCcccccCcCCC
Confidence 99988 7777664 56777777776654
No 22
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=1e-11 Score=85.13 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=63.6
Q ss_pred CCCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChh-hhcCCCcc
Q 039786 3 LRQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDW-IFKLKNLI 80 (210)
Q Consensus 3 L~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~-~~~l~~L~ 80 (210)
..+||+|++++ .....++..+..+++|++|++++|.... ++.+..++ +|++|++++ .++.+|.. +..+++|+
T Consensus 17 ~~~lr~L~L~~--n~I~~i~~~~~~l~~L~~L~Ls~N~i~~---l~~~~~l~-~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 17 AVRDRELDLRG--YKIPVIENLGATLDQFDAIDFSDNEIRK---LDGFPLLR-RLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp TTSCEEEECTT--SCCCSCCCGGGGTTCCSEEECCSSCCCE---ECCCCCCS-SCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCcCcEEECCC--CCCCccCccccccccCCEEECCCCCCCc---cCCcccCc-chhhhhcccccccCCCccccccccccc
Confidence 45677777775 2223333344566777777777754322 23455565 777777777 66666543 35677777
Q ss_pred EEEEEeecCCCcc-hhhhhcCCCccEEEecCc
Q 039786 81 RLGLELSGLAEEP-IRVLQASPNLLEILLTGT 111 (210)
Q Consensus 81 ~L~l~~~~l~~~~-~~~l~~l~~L~~L~l~~~ 111 (210)
+|++++|.++..+ +..+..+++|++|+++++
T Consensus 91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N 122 (162)
T d1a9na_ 91 ELILTNNSLVELGDLDPLASLKSLTYLCILRN 122 (162)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSS
T ss_pred cceeccccccccccccccccccccchhhcCCC
Confidence 7777777765532 355667777777777633
No 23
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.08 E-value=1.4e-10 Score=81.47 Aligned_cols=104 Identities=15% Similarity=0.168 Sum_probs=67.5
Q ss_pred cCceEEEeec-cCcc-C-ChhhhcCCCccEEEEEeecCCCcchhhhhcCCCccEEEecCccCCcceE-ecCCCCCcccEE
Q 039786 55 QYLQRLYLTG-NMKK-L-PDWIFKLKNLIRLGLELSGLAEEPIRVLQASPNLLEILLTGTYDYELFH-FEAGWFPKLQKL 130 (210)
Q Consensus 55 ~~L~~L~l~~-~~~~-~-p~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~-~~~~~~~~L~~L 130 (210)
.++++|+|.+ .++. + +.++..+++|++|++++|.+...+...+..+++|++|++++..- ..++ ....++++|+.|
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l-~~l~~~~F~~l~~L~~L 107 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI-KEISNKMFLGLHQLKTL 107 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCC-CEECSSSSTTCTTCCEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccc-cccCHHHHhCCCccccc
Confidence 3788888877 6654 3 33557778888888888877776667777788888888873322 2222 223556777777
Q ss_pred EecccCcceeeEEc-cCCCCcccEEEeccCC
Q 039786 131 LLWDFIAVKSVIIE-KGAVPDIRELRIGPCP 160 (210)
Q Consensus 131 ~l~~~~~l~~~~~~-~~~~~~L~~L~i~~~~ 160 (210)
++.++. +..++.. ...+++|+++++.+|+
T Consensus 108 ~L~~N~-l~~i~~~~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 108 NLYDNQ-ISCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp ECCSSC-CCEECTTSSTTCTTCCEEECTTCC
T ss_pred ccCCcc-ccccCHHHhcCCcccccccccccc
Confidence 777654 4444332 2456777777777776
No 24
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.03 E-value=8.2e-11 Score=76.81 Aligned_cols=81 Identities=20% Similarity=0.217 Sum_probs=47.3
Q ss_pred hhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCccEEEEEeecCCCcc-hhhhhcCCC
Q 039786 25 IANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLIRLGLELSGLAEEP-IRVLQASPN 102 (210)
Q Consensus 25 l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~~L~l~~~~l~~~~-~~~l~~l~~ 102 (210)
++++++|++|++++|... ..+ ..+..++ +|+.|++++ .++.+| .+..+++|++|++++|.++..+ +..++.+++
T Consensus 16 l~~l~~L~~L~ls~N~l~-~lp-~~~~~l~-~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~ 91 (124)
T d1dcea3 16 LEQLLLVTHLDLSHNRLR-ALP-PALAALR-CLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPR 91 (124)
T ss_dssp GGGGTTCCEEECCSSCCC-CCC-GGGGGCT-TCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTT
T ss_pred cccCCCCCEEECCCCccC-cch-hhhhhhh-cccccccccccccccC-ccccccccCeEECCCCccCCCCCchhhcCCCC
Confidence 566666666666664332 221 2344454 666666666 556565 3566666666666666665432 345566666
Q ss_pred ccEEEec
Q 039786 103 LLEILLT 109 (210)
Q Consensus 103 L~~L~l~ 109 (210)
|+.|+++
T Consensus 92 L~~L~l~ 98 (124)
T d1dcea3 92 LVLLNLQ 98 (124)
T ss_dssp CCEEECT
T ss_pred CCEEECC
Confidence 6666665
No 25
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.03 E-value=3.8e-12 Score=90.15 Aligned_cols=84 Identities=20% Similarity=0.205 Sum_probs=46.3
Q ss_pred hHHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCccEEEEEeecCCCcchhhhh
Q 039786 20 DLCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLIRLGLELSGLAEEPIRVLQ 98 (210)
Q Consensus 20 ~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~~L~l~~~~l~~~~~~~l~ 98 (210)
.+..+++.+++|++|++++|... . ++.+..++ +|+.|++++ .++.+|.....+++|++|++++|.++. +..+.
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~-~--i~~l~~l~-~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~--l~~~~ 112 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIE-K--ISSLSGME-NLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS--LSGIE 112 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEES-C--CCCHHHHT-TCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCC--HHHHH
T ss_pred hhhhHHhcccccceeECcccCCC-C--cccccCCc-cccChhhcccccccccccccccccccccccccccccc--ccccc
Confidence 34455666666666666654322 1 22344444 666666665 555565444444566666666666554 23455
Q ss_pred cCCCccEEEec
Q 039786 99 ASPNLLEILLT 109 (210)
Q Consensus 99 ~l~~L~~L~l~ 109 (210)
.+++|+.|+++
T Consensus 113 ~l~~L~~L~L~ 123 (198)
T d1m9la_ 113 KLVNLRVLYMS 123 (198)
T ss_dssp HHHHSSEEEES
T ss_pred ccccccccccc
Confidence 55666666665
No 26
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.00 E-value=3.9e-10 Score=79.13 Aligned_cols=106 Identities=14% Similarity=0.038 Sum_probs=76.4
Q ss_pred CCCceEEEEecCcccccccccccCCccCceEEEeec-cCccC-ChhhhcCCCccEEEEEeecCCCcchhhhhcCCCccEE
Q 039786 29 KNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKL-PDWIFKLKNLIRLGLELSGLAEEPIRVLQASPNLLEI 106 (210)
Q Consensus 29 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~-p~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L 106 (210)
+++++|++++|......+...+..++ +|++|++.+ .+..+ +..+..+++|+.|++++|+++..+..++.++++|++|
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~-~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L 107 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLP-HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTL 107 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCT-TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCc-eEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCccccc
Confidence 58889999886554444445566676 899999987 66664 4466778899999999998888777788889999999
Q ss_pred EecCccCCcceEe-cCCCCCcccEEEecccC
Q 039786 107 LLTGTYDYELFHF-EAGWFPKLQKLLLWDFI 136 (210)
Q Consensus 107 ~l~~~~~~~~~~~-~~~~~~~L~~L~l~~~~ 136 (210)
+|++..- ..+.. ....+++|+++++.+.+
T Consensus 108 ~L~~N~l-~~i~~~~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 108 NLYDNQI-SCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp ECCSSCC-CEECTTSSTTCTTCCEEECTTCC
T ss_pred ccCCccc-cccCHHHhcCCcccccccccccc
Confidence 9974322 22222 23556788888887654
No 27
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.00 E-value=4.8e-10 Score=73.05 Aligned_cols=71 Identities=23% Similarity=0.230 Sum_probs=41.6
Q ss_pred eEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCccEEEEEeecCCCcchhhhhcCCCccEEEec
Q 039786 33 SLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLIRLGLELSGLAEEPIRVLQASPNLLEILLT 109 (210)
Q Consensus 33 ~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~ 109 (210)
.|+++++.... +..+..+. +|++|++++ .++.+|..++.+++|+.|++++|.++.. +.++.+++|+.|+++
T Consensus 2 ~L~Ls~n~l~~---l~~l~~l~-~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l--~~~~~l~~L~~L~l~ 73 (124)
T d1dcea3 2 VLHLAHKDLTV---LCHLEQLL-LVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV--DGVANLPRLQELLLC 73 (124)
T ss_dssp EEECTTSCCSS---CCCGGGGT-TCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCSSCCEEECC
T ss_pred EEEcCCCCCCC---CcccccCC-CCCEEECCCCccCcchhhhhhhhccccccccccccccc--CccccccccCeEECC
Confidence 45555543322 22344444 677777766 6666666666667777777777666553 345666666666665
No 28
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.89 E-value=5.1e-09 Score=79.40 Aligned_cols=36 Identities=22% Similarity=0.372 Sum_probs=23.8
Q ss_pred CccCceEEEeec-cCccCChhhhcCCCccEEEEEeecC
Q 039786 53 PPQYLQRLYLTG-NMKKLPDWIFKLKNLIRLGLELSGL 89 (210)
Q Consensus 53 ~~~~L~~L~l~~-~~~~~p~~~~~l~~L~~L~l~~~~l 89 (210)
+++.|++|++.+ .++.+|. ++.+++|++|++.++.+
T Consensus 96 lp~~L~~L~L~~n~l~~lp~-~~~l~~L~~L~l~~~~~ 132 (353)
T d1jl5a_ 96 LPPLLEYLGVSNNQLEKLPE-LQNSSFLKIIDVDNNSL 132 (353)
T ss_dssp CCTTCCEEECCSSCCSSCCC-CTTCTTCCEEECCSSCC
T ss_pred hccccccccccccccccccc-hhhhccceeeccccccc
Confidence 343677777776 6666664 46677777777776654
No 29
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.81 E-value=2.8e-11 Score=85.57 Aligned_cols=102 Identities=24% Similarity=0.308 Sum_probs=76.4
Q ss_pred CCCCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCccccccccccc-CCccCceEEEeec-cCccCChhhhcCCCc
Q 039786 2 KLRQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSLS-SPPQYLQRLYLTG-NMKKLPDWIFKLKNL 79 (210)
Q Consensus 2 ~L~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~-~~~~~L~~L~l~~-~~~~~p~~~~~l~~L 79 (210)
.|++|++|++++ .....+ +.++.+++|+.|++++|..... ..+. .++ +|++|++.+ .++.++ .+..+++|
T Consensus 46 ~L~~L~~L~Ls~--n~I~~i-~~l~~l~~L~~L~Ls~N~i~~i---~~~~~~~~-~L~~L~l~~N~i~~l~-~~~~l~~L 117 (198)
T d1m9la_ 46 TLKACKHLALST--NNIEKI-SSLSGMENLRILSLGRNLIKKI---ENLDAVAD-TLEELWISYNQIASLS-GIEKLVNL 117 (198)
T ss_dssp HTTTCCEEECSE--EEESCC-CCHHHHTTCCEEECCEEEECSC---SSHHHHHH-HCCEEECSEEECCCHH-HHHHHHHS
T ss_pred cccccceeECcc--cCCCCc-ccccCCccccChhhcccccccc---cccccccc-cccccccccccccccc-cccccccc
Confidence 478999999997 112222 3478899999999998754221 2222 233 799999988 777775 57788999
Q ss_pred cEEEEEeecCCCcc-hhhhhcCCCccEEEecCc
Q 039786 80 IRLGLELSGLAEEP-IRVLQASPNLLEILLTGT 111 (210)
Q Consensus 80 ~~L~l~~~~l~~~~-~~~l~~l~~L~~L~l~~~ 111 (210)
++|++++|.++..+ +..++.+++|++|+++++
T Consensus 118 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N 150 (198)
T d1m9la_ 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSS
T ss_pred cccccccchhccccccccccCCCccceeecCCC
Confidence 99999999987753 467889999999999843
No 30
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.70 E-value=1.7e-08 Score=68.11 Aligned_cols=87 Identities=22% Similarity=0.262 Sum_probs=46.5
Q ss_pred HHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCC-hhhhcCCCccEEEEEeecCCCcchhhhh
Q 039786 21 LCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLP-DWIFKLKNLIRLGLELSGLAEEPIRVLQ 98 (210)
Q Consensus 21 ~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p-~~~~~l~~L~~L~l~~~~l~~~~~~~l~ 98 (210)
++..+..+++|+.|++.+++.....+...|..++ +|+.|++.+ .++.++ ..+..+++|++|+|++|+++..+...+.
T Consensus 23 ~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~-~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~ 101 (156)
T d2ifga3 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLG-ELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQ 101 (156)
T ss_dssp TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCC-CCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTC
T ss_pred CcccccCccccCeeecCCCccccccCchhhcccc-ccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhc
Confidence 3444555566666666554444444444555555 566666665 555543 3455566666666666665554433333
Q ss_pred cCCCccEEEec
Q 039786 99 ASPNLLEILLT 109 (210)
Q Consensus 99 ~l~~L~~L~l~ 109 (210)
. .+|+.|+|+
T Consensus 102 ~-~~l~~L~L~ 111 (156)
T d2ifga3 102 G-LSLQELVLS 111 (156)
T ss_dssp S-CCCCEEECC
T ss_pred c-ccccccccC
Confidence 2 245555554
No 31
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.53 E-value=1.1e-08 Score=77.76 Aligned_cols=127 Identities=17% Similarity=0.165 Sum_probs=68.4
Q ss_pred CceEEEeec-cCcc-----CChhhhcCCCccEEEEEeecCCCcch-----hhhhcCCCccEEEecCccC-Cc---ceEec
Q 039786 56 YLQRLYLTG-NMKK-----LPDWIFKLKNLIRLGLELSGLAEEPI-----RVLQASPNLLEILLTGTYD-YE---LFHFE 120 (210)
Q Consensus 56 ~L~~L~l~~-~~~~-----~p~~~~~l~~L~~L~l~~~~l~~~~~-----~~l~~l~~L~~L~l~~~~~-~~---~~~~~ 120 (210)
.|+.+.+.+ .++. +...+...+.|+.|++..|.+..... ..+...++|+.|+++.+.- .. .+...
T Consensus 159 ~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 238 (344)
T d2ca6a1 159 PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 238 (344)
T ss_dssp CCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred ccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccccccc
Confidence 566666654 3321 22234556777788887777655422 2244667778887763321 11 11112
Q ss_pred CCCCCcccEEEecccCccee----eE--EccCCCCcccEEEeccCCCCC-----ccccccc-ccccccceeeecc
Q 039786 121 AGWFPKLQKLLLWDFIAVKS----VI--IEKGAVPDIRELRIGPCPLLM-----EIPIGIE-HLKNLKLLKFAGM 183 (210)
Q Consensus 121 ~~~~~~L~~L~l~~~~~l~~----~~--~~~~~~~~L~~L~i~~~~~l~-----~lp~~l~-~l~~L~~l~l~~~ 183 (210)
...+++|+.|++.+|.-... +. ......+.|++|++++|. ++ .+...+. +.++|++|++.++
T Consensus 239 l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~-i~~~~~~~l~~~l~~~~~~L~~L~l~~N 312 (344)
T d2ca6a1 239 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE-IELDAVRTLKTVIDEKMPDLLFLELNGN 312 (344)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSC-CBHHHHHHHHHHHHHHCTTCCEEECTTS
T ss_pred ccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCc-CChHHHHHHHHHHHccCCCCCEEECCCC
Confidence 33467778888777652111 00 011234668888888776 33 2333332 5677888888764
No 32
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.49 E-value=1.3e-07 Score=63.76 Aligned_cols=59 Identities=24% Similarity=0.287 Sum_probs=35.3
Q ss_pred ccCCccCceEEEeec--cCccCCh-hhhcCCCccEEEEEeecCCCcchhhhhcCCCccEEEec
Q 039786 50 LSSPPQYLQRLYLTG--NMKKLPD-WIFKLKNLIRLGLELSGLAEEPIRVLQASPNLLEILLT 109 (210)
Q Consensus 50 ~~~~~~~L~~L~l~~--~~~~~p~-~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~ 109 (210)
+...+ +|++|++.+ .++.++. .+..+++|+.|++++|+++..+..++..+++|++|+|+
T Consensus 27 l~~l~-~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 27 LPGAE-NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SCSCS-CCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred ccCcc-ccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceecc
Confidence 44444 666666643 3555543 45556666666666666666555566666666666665
No 33
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.37 E-value=1.2e-08 Score=77.62 Aligned_cols=108 Identities=16% Similarity=0.106 Sum_probs=47.1
Q ss_pred CCCccEEEEEeecCCCcchhh----hhcCCCccEEEecCccCCcc-----eEecCCCCCcccEEEecccCccee----eE
Q 039786 76 LKNLIRLGLELSGLAEEPIRV----LQASPNLLEILLTGTYDYEL-----FHFEAGWFPKLQKLLLWDFIAVKS----VI 142 (210)
Q Consensus 76 l~~L~~L~l~~~~l~~~~~~~----l~~l~~L~~L~l~~~~~~~~-----~~~~~~~~~~L~~L~l~~~~~l~~----~~ 142 (210)
.+.|+.+.+..|.+....... +...+.|+.|+++.+..... +......+++|+.|++.++..... +.
T Consensus 157 ~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~ 236 (344)
T d2ca6a1 157 APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 236 (344)
T ss_dssp CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHH
T ss_pred Ccccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccccc
Confidence 344555555555444333222 23455666666653221110 111123345666666665432110 11
Q ss_pred EccCCCCcccEEEeccCCCCCc-----ccccccc--cccccceeeecch
Q 039786 143 IEKGAVPDIRELRIGPCPLLME-----IPIGIEH--LKNLKLLKFAGMV 184 (210)
Q Consensus 143 ~~~~~~~~L~~L~i~~~~~l~~-----lp~~l~~--l~~L~~l~l~~~~ 184 (210)
......++|++|++++|. ++. +-..+.. .++|++|+++++.
T Consensus 237 ~~l~~~~~L~~L~Ls~n~-i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~ 284 (344)
T d2ca6a1 237 IALKSWPNLRELGLNDCL-LSARGAAAVVDAFSKLENIGLQTLRLQYNE 284 (344)
T ss_dssp HHGGGCTTCCEEECTTCC-CCHHHHHHHHHHHHTCSSCCCCEEECCSSC
T ss_pred ccccccccchhhhhhcCc-cCchhhHHHHHHhhhccCCCCCEEECCCCc
Confidence 112245666666766665 321 1112211 2456667766653
No 34
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.37 E-value=1.6e-06 Score=65.15 Aligned_cols=91 Identities=30% Similarity=0.244 Sum_probs=58.9
Q ss_pred CCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCcccccccccccCCccCceEEEeec-cCccCChhhhcCCCccEEE
Q 039786 5 QLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDLLSLSSPPQYLQRLYLTG-NMKKLPDWIFKLKNLIRLG 83 (210)
Q Consensus 5 ~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~p~~~~~l~~L~~L~ 83 (210)
++++|++++ .....+++ ..++|++|+++++... ..+ ....+|+.|++.+ .++.++.. .+.|++|+
T Consensus 39 ~l~~LdLs~--~~L~~lp~---~~~~L~~L~Ls~N~l~-~lp-----~~~~~L~~L~l~~n~l~~l~~l---p~~L~~L~ 104 (353)
T d1jl5a_ 39 QAHELELNN--LGLSSLPE---LPPHLESLVASCNSLT-ELP-----ELPQSLKSLLVDNNNLKALSDL---PPLLEYLG 104 (353)
T ss_dssp TCSEEECTT--SCCSCCCS---CCTTCSEEECCSSCCS-SCC-----CCCTTCCEEECCSSCCSCCCSC---CTTCCEEE
T ss_pred CCCEEEeCC--CCCCCCCC---CCCCCCEEECCCCCCc-ccc-----cchhhhhhhhhhhcccchhhhh---cccccccc
Confidence 578888875 23334443 2467888888875432 221 1223788888887 66666532 24688999
Q ss_pred EEeecCCCcchhhhhcCCCccEEEecCc
Q 039786 84 LELSGLAEEPIRVLQASPNLLEILLTGT 111 (210)
Q Consensus 84 l~~~~l~~~~~~~l~~l~~L~~L~l~~~ 111 (210)
+++|.+...+ ..+.+++|+.|+++++
T Consensus 105 L~~n~l~~lp--~~~~l~~L~~L~l~~~ 130 (353)
T d1jl5a_ 105 VSNNQLEKLP--ELQNSSFLKIIDVDNN 130 (353)
T ss_dssp CCSSCCSSCC--CCTTCTTCCEEECCSS
T ss_pred cccccccccc--chhhhccceeeccccc
Confidence 9888876543 4567888999888743
No 35
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.69 E-value=9.1e-06 Score=62.96 Aligned_cols=105 Identities=16% Similarity=0.190 Sum_probs=67.0
Q ss_pred CCCcEEEEEecCCCcchHHHHhhcCCCCceEEEEecCccccccc----ccccCCccCceEEEeec-cCcc--CC---hhh
Q 039786 4 RQLRKLSIRPQNGNGKDLCGLIANLKNLESLTVEMTSKEEILDL----LSLSSPPQYLQRLYLTG-NMKK--LP---DWI 73 (210)
Q Consensus 4 ~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~----~~~~~~~~~L~~L~l~~-~~~~--~p---~~~ 73 (210)
++|++|+++........+...+..+++++.|++.+|... .... ..+...+ +|++|++++ .++. +. ..+
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~-~~~~~~l~~~L~~~~-~L~~LdLs~N~i~~~~~~~l~~~l 79 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLT-EARCKDISSALRVNP-ALAELNLRSNELGDVGVHCVLQGL 79 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCC-HHHHHHHHHHHHTCT-TCCEEECTTCCCHHHHHHHHHHTT
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCC-HHHHHHHHHHHhcCC-CCCEEECcCCcCChHHHHHHHHHH
Confidence 367888888633445556677778888889999887532 2111 2234455 788888877 5542 11 111
Q ss_pred h-cCCCccEEEEEeecCCCcchh----hhhcCCCccEEEecC
Q 039786 74 F-KLKNLIRLGLELSGLAEEPIR----VLQASPNLLEILLTG 110 (210)
Q Consensus 74 ~-~l~~L~~L~l~~~~l~~~~~~----~l~~l~~L~~L~l~~ 110 (210)
. ...+|++|++++|.+++.... .+..+++|++|++++
T Consensus 80 ~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~ 121 (460)
T d1z7xw1 80 QTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSD 121 (460)
T ss_dssp CSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCS
T ss_pred hcCCCCCCEEECCCCCccccccccccchhhcccccccccccc
Confidence 1 124788888888888765533 345678888888873
No 36
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.50 E-value=9e-06 Score=62.99 Aligned_cols=105 Identities=16% Similarity=0.136 Sum_probs=63.0
Q ss_pred CCceEEEEecCccccccccc-ccCCccCceEEEeec-cCcc-----CChhhhcCCCccEEEEEeecCCCcchhhhhc---
Q 039786 30 NLESLTVEMTSKEEILDLLS-LSSPPQYLQRLYLTG-NMKK-----LPDWIFKLKNLIRLGLELSGLAEEPIRVLQA--- 99 (210)
Q Consensus 30 ~L~~L~l~~~~~~~~~~~~~-~~~~~~~L~~L~l~~-~~~~-----~p~~~~~l~~L~~L~l~~~~l~~~~~~~l~~--- 99 (210)
+|+.|+++++.. ....+.. +..+. +++.|+|.+ .++. +...+..+++|+.|++++|.++..+...+..
T Consensus 3 ~l~~ld~~~~~i-~~~~~~~l~~~l~-~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~ 80 (460)
T d1z7xw1 3 DIQSLDIQCEEL-SDARWAELLPLLQ-QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 80 (460)
T ss_dssp EEEEEEEESCCC-CHHHHHHHHHHHT-TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CCCEEEeeCCcC-ChHHHHHHHHhCC-CCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHh
Confidence 578888876443 3322222 23344 788888887 5542 3345567888888888888776555444432
Q ss_pred --CCCccEEEecCccCCcc----eEecCCCCCcccEEEecccC
Q 039786 100 --SPNLLEILLTGTYDYEL----FHFEAGWFPKLQKLLLWDFI 136 (210)
Q Consensus 100 --l~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~~~ 136 (210)
.++|+.|+++++...+. +......+++|+.|++.++.
T Consensus 81 ~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 81 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred cCCCCCCEEECCCCCccccccccccchhhcccccccccccccc
Confidence 25788888874432211 11123456788888887653
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.15 E-value=2.1e-05 Score=52.75 Aligned_cols=79 Identities=25% Similarity=0.214 Sum_probs=49.3
Q ss_pred CCccCceEEEeec-cCccCC---hhhhcCCCccEEEEEeecCCCcchhhhhcCCCccEEEec-CccCCcc------eEec
Q 039786 52 SPPQYLQRLYLTG-NMKKLP---DWIFKLKNLIRLGLELSGLAEEPIRVLQASPNLLEILLT-GTYDYEL------FHFE 120 (210)
Q Consensus 52 ~~~~~L~~L~l~~-~~~~~p---~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~-~~~~~~~------~~~~ 120 (210)
.++ +|+.|++++ .++.++ ..+..+++|+.|++++|.++..+.........|+.|++. +...... ....
T Consensus 63 ~~~-~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i 141 (162)
T d1koha1 63 NIP-ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141 (162)
T ss_dssp HCT-TCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHH
T ss_pred hCC-CCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHH
Confidence 345 788888887 676654 345678888888888888777543333345578888887 3221110 0011
Q ss_pred CCCCCcccEEE
Q 039786 121 AGWFPKLQKLL 131 (210)
Q Consensus 121 ~~~~~~L~~L~ 131 (210)
...||+|+.|+
T Consensus 142 ~~~~P~L~~LD 152 (162)
T d1koha1 142 RERFPKLLRLD 152 (162)
T ss_dssp HTTSTTCCEET
T ss_pred HHHCCCCCEEC
Confidence 34678888775
No 38
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.01 E-value=0.00011 Score=49.45 Aligned_cols=35 Identities=17% Similarity=0.118 Sum_probs=16.4
Q ss_pred cCCCccEEEEEeecCCCcchhh----hhcCCCccEEEec
Q 039786 75 KLKNLIRLGLELSGLAEEPIRV----LQASPNLLEILLT 109 (210)
Q Consensus 75 ~l~~L~~L~l~~~~l~~~~~~~----l~~l~~L~~L~l~ 109 (210)
..+.|+.|++++|.+....... +..-++|++|+++
T Consensus 70 ~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~ 108 (167)
T d1pgva_ 70 TSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKAD 108 (167)
T ss_dssp HCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECC
T ss_pred hcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECC
Confidence 3445555555555554433222 2233455555554
No 39
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.94 E-value=5.9e-05 Score=50.49 Aligned_cols=87 Identities=20% Similarity=0.098 Sum_probs=54.1
Q ss_pred CChhhhcCCCccEEEEEeecCCCcc--hhhhhcCCCccEEEecCccCCcceEecCCCCCcccEEEecccCcceeeE----
Q 039786 69 LPDWIFKLKNLIRLGLELSGLAEEP--IRVLQASPNLLEILLTGTYDYELFHFEAGWFPKLQKLLLWDFIAVKSVI---- 142 (210)
Q Consensus 69 ~p~~~~~l~~L~~L~l~~~~l~~~~--~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~---- 142 (210)
++.....+++|++|++++|.++... ...+..+++|+.|++++...........-...+|+.+++.+++-.....
T Consensus 57 l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~ 136 (162)
T d1koha1 57 LRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136 (162)
T ss_dssp HHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHH
T ss_pred hHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchh
Confidence 3334457899999999999987743 2456789999999998332221111112234578888888776432111
Q ss_pred ---EccCCCCcccEEE
Q 039786 143 ---IEKGAVPDIRELR 155 (210)
Q Consensus 143 ---~~~~~~~~L~~L~ 155 (210)
.....+|+|+.|+
T Consensus 137 y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 137 YISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHTTSTTCCEET
T ss_pred HHHHHHHHCCCCCEEC
Confidence 1123578888774
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.28 E-value=0.0012 Score=44.09 Aligned_cols=17 Identities=24% Similarity=0.313 Sum_probs=8.7
Q ss_pred HHhhcCCCCceEEEEec
Q 039786 23 GLIANLKNLESLTVEMT 39 (210)
Q Consensus 23 ~~l~~l~~L~~L~l~~~ 39 (210)
.++...+.|++|++++|
T Consensus 38 ~~L~~n~~L~~L~Ls~n 54 (167)
T d1pgva_ 38 EAACNSKHIEKFSLANT 54 (167)
T ss_dssp HHHTTCSCCCEEECTTS
T ss_pred HHHhhCCccceeecccc
Confidence 34444455555555554
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.13 E-value=0.00089 Score=44.56 Aligned_cols=36 Identities=22% Similarity=0.262 Sum_probs=16.4
Q ss_pred hcCCCccEEEEEeecCCCcch----hhhhcCCCccEEEec
Q 039786 74 FKLKNLIRLGLELSGLAEEPI----RVLQASPNLLEILLT 109 (210)
Q Consensus 74 ~~l~~L~~L~l~~~~l~~~~~----~~l~~l~~L~~L~l~ 109 (210)
...+.++.+++++|.+..... ..+...++|+.++|.
T Consensus 71 ~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~ 110 (166)
T d1io0a_ 71 KVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRID 110 (166)
T ss_dssp HHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECC
T ss_pred hhcccchhhhhccccccchhHHHHHHHHHhCccccEEeec
Confidence 334555555555555444332 223344555554443
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.64 E-value=0.0022 Score=42.55 Aligned_cols=18 Identities=6% Similarity=0.074 Sum_probs=9.3
Q ss_pred HHHhhcCCCCceEEEEec
Q 039786 22 CGLIANLKNLESLTVEMT 39 (210)
Q Consensus 22 ~~~l~~l~~L~~L~l~~~ 39 (210)
..++...++|++|++++|
T Consensus 39 ~~al~~n~~L~~L~Ls~n 56 (166)
T d1io0a_ 39 AEALKTNTYVKKFSIVGT 56 (166)
T ss_dssp HHHHTTCCSCCEEECTTS
T ss_pred HHHHhcCCccCeeeccCC
Confidence 334444555555655554
Done!