BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039787
(278 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 33 RKAGSEQQPPGPTPYPVIGNLLELGDKP-HKSLAKLAKIHGPIMTLKFGQXXXXXXXXAS 91
+K S+ +PPGPTP PVIGN+L++G K KSL L+K++GP+ TL FG
Sbjct: 3 KKTSSKGRPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYE 62
Query: 92 MAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKI 138
K L + F R + A N + G+V+ WK +R+
Sbjct: 63 AVKEALIDLGEEFSGRGIFPLAERAN-RGFGIVF-SNGKKWKEIRRF 107
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 31 KRRKAGSEQQPPGPTPYPVIGNLLELGDKP-HKSLAKLAKIHGPIMTLKFGQXXXXXXXX 89
K+ +G + PPGPTP PVIGN+L++G K KSL L+K++GP+ TL FG
Sbjct: 3 KKTSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHG 62
Query: 90 ASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKI 138
K L + F R + A N + G+V+ WK +R+
Sbjct: 63 YEAVKEALIDLGEEFSGRGIFPLAERAN-RGFGIVF-SNGKKWKEIRRF 109
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 31 KRRKAGSEQQPPGPTPYPVIGNLLELGDKP-HKSLAKLAKIHGPIMTLKFGQXXXXXXXX 89
K+ +G + PPGPTP PVIGN+L++ K KSL L+KI+GP+ TL FG
Sbjct: 3 KKTSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHG 62
Query: 90 ASMAKAILQNHDSSFCNR 107
+ K L + F R
Sbjct: 63 YEVVKEALIDLGEEFSGR 80
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 32 RRKAGSEQQPPGPTPYPVIGNL--LELGDKPHKSLAKLAKIHGPIMTLKFGQXXXXXXXX 89
++ + + PPGP P P+IGNL LEL + P KS +LA+ GP+ TL G
Sbjct: 3 KKTSSKGKLPPGPFPLPIIGNLFQLELKNIP-KSFTRLAQRFGPVFTLYVGSQRMVVMHG 61
Query: 90 ASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKI 138
K L ++ F R D + H++ G+++ T WK++R+
Sbjct: 62 YKAVKEALLDYKDEFSGRG--DLPAFHAHRDRGIIFNNGPT-WKDIRRF 107
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 32 RRKAGSEQQPPGPTPYPVIGNLLELGDKP-HKSLAKLAKIHGPIMTLKFGQXXXXXXXXA 90
++ + + PPGPTP+P+IGN+L++ K KSL K ++ +GP+ T+ G
Sbjct: 3 KKTSSKGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGY 62
Query: 91 SMAKAILQNHDSSFCNR-MVPDAACSYNHQEIGMVWLPVSTPWKNLRKI 138
K L + F R VP + +G+ + T WK +R+
Sbjct: 63 EAVKEALVDLGEEFAGRGSVP--ILEKVSKGLGIAFSNAKT-WKEMRRF 108
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 32 RRKAGSEQQPPGPTPYPVIGNLLELGDKP-HKSLAKLAKIHGPIMTLKFGQXXXXXXXXA 90
++ + + PPGPTP P+IGN+L++ K KS +K++GP+ T+ FG
Sbjct: 3 KKTSSKGKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGY 62
Query: 91 SMAKAILQNHDSSFCNR 107
K L ++ F R
Sbjct: 63 EAVKEALIDNGEEFSGR 79
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 33 RKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQXXXXXXXXASM 92
+K S+ +PPGP +P+IGN +G H S A+LA+ +G + ++ G
Sbjct: 3 KKTSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERA 62
Query: 93 AKAILQNHDSSFCNR 107
L S+F +R
Sbjct: 63 IHQALVQQGSAFADR 77
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 41 PPGPTPYPVIGNLLELG-DKPHKSLAKLAKIHGPIMTLKFGQXXXXXXXXASMAKAILQN 99
PPGPTP P IGN L+L ++ + SL K+++ +GP+ T+ G + L +
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 100 HDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRK--ICNLHIFSSHKLDANQDIRR 157
F R A + + G+V+ K LR+ I L F K +
Sbjct: 72 QAEEFSGRG-EQATFDWVFKGYGVVF-SNGERAKQLRRFSIATLRDFGVGKRGIEE---- 125
Query: 158 KKIKHLLAYVEENCRVGQAIVIGQAVF--NTSLNVLSNTIFSVDLVDPTAREF 208
+I+ ++ + R I F T NV+S+ +F D D +EF
Sbjct: 126 -RIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFG-DRFDYKDKEF 176
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 41 PPGPTPYPVIGNLLELG-DKPHKSLAKLAKIHGPIMTLKFGQXXXXXXXXASMAKAILQN 99
PPGPTP P IGN L+L ++ + SL K+++ +GP+ T+ G + L +
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 100 HDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRK--ICNLHIFSSHKLDANQDIRR 157
F R A + + G+V+ K LR+ I L F K +
Sbjct: 72 QAEEFSGRG-EQATFDWVFKGYGVVF-SNGERAKQLRRFSIATLRDFGVGKRGIEE---- 125
Query: 158 KKIKHLLAYVEENCRVGQAIVIGQAVF--NTSLNVLSNTIFSVDLVDPTAREF 208
+I+ ++ + R I F T NV+S+ +F D D +EF
Sbjct: 126 -RIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFG-DRFDYKDKEF 176
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 41 PPGPTPYPVIGNLLELG-DKPHKSLAKLAKIHGPIMTLKFGQXXXXXXXXASMAKAILQN 99
PPGPTP P IGN L+L ++ + SL K+++ +GP+ T+ G + L +
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 100 HDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRK--ICNLHIFSSHKLDANQDIRR 157
F R A + + G+V+ K LR+ I L F K +
Sbjct: 72 QAEEFSGRG-EQATFDWVFKGYGVVF-SNGERAKQLRRFSIATLRDFGVGKRGIEE---- 125
Query: 158 KKIKHLLAYVEENCRVGQAIVIGQAVF--NTSLNVLSNTIFSVDLVDPTAREF 208
+I+ ++ + R I F T NV+S+ +F D D +EF
Sbjct: 126 -RIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFG-DRFDYKDKEF 176
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 41 PPGPTPYPVIGNLLELG-DKPHKSLAKLAKIHGPIMTLKFGQXXXXXXXXASMAKAILQN 99
PPGPTP P IGN L+L ++ + SL K+++ +GP+ T+ G + L +
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 100 HDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRK--ICNLHIFSSHKLDANQDIRR 157
F R A + + G+V+ K LR+ I L F K +
Sbjct: 72 QAEEFSGRG-EQATFDWVFKGYGVVF-SNGERAKQLRRFSIATLRDFGVGKRGIEE---- 125
Query: 158 KKIKHLLAYVEENCRVGQAIVIGQAVF--NTSLNVLSNTIFSVDLVDPTAREF 208
+I+ ++ + R I F T NV+S+ +F D D +EF
Sbjct: 126 -RIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFG-DRFDYKDKEF 176
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 13/173 (7%)
Query: 41 PPGPTPYPVIGNLLELG-DKPHKSLAKLAKIHGPIMTLKFGQXXXXXXXXASMAKAILQN 99
PPGPTP P IGN L+L ++ + SL K+++ +GP+ T+ G + L +
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 100 HDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRK--ICNLHIFSSHKLDANQDIRR 157
F R A + + G+V+ K LR+ I L F K +
Sbjct: 72 QAEEFSGRG-EQATFDWVFKGYGVVF-SNGERAKQLRRFSIATLRDFGVGKRGIEE---- 125
Query: 158 KKIKHLLAYVEENCRVGQAIVIGQAVF--NTSLNVLSNTIFSVDLVDPTAREF 208
+I+ ++ + R I F T NV+S+ +F D D +EF
Sbjct: 126 -RIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFG-DRFDYKDKEF 176
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 41 PPGPTPYPVIGNLLELG-DKPHKSLAKLAKIHGPIMTLKFGQXXXXXXXXASMAKAILQN 99
PPGPTP P IGN L+L ++ + SL K+++ +GP+ T+ G K L +
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVD 71
Query: 100 HDSSFCNR 107
F R
Sbjct: 72 QAEEFSGR 79
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 31 KRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG 80
K+ + + PPGP +P+IG++L LG PH +L+++++ +G ++ ++ G
Sbjct: 3 KKTSSKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIG 52
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 14/164 (8%)
Query: 42 PGPTPYPVIGNLLELGDKPHKSLA----KLAKIHGPIMTLKFGQXXXXXXXXASMAKAIL 97
PGPTP P +GN+L HK + K +G + GQ M K +L
Sbjct: 18 PGPTPLPFLGNILSY----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVL 73
Query: 98 -QNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIR 156
+ S F NR P + I + WK LR + + F+S KL I
Sbjct: 74 VKECYSVFTNRR-PFGPVGFMKSAISIAE---DEEWKRLRSLLS-PTFTSGKLKEMVPII 128
Query: 157 RKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDL 200
+ L+ + G+ + + S++V+++T F V++
Sbjct: 129 AQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNI 172
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 14/164 (8%)
Query: 42 PGPTPYPVIGNLLELGDKPHKSLA----KLAKIHGPIMTLKFGQXXXXXXXXASMAKAIL 97
PGPTP P +GN+L HK + K +G + GQ M K +L
Sbjct: 19 PGPTPLPFLGNILSY----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVL 74
Query: 98 -QNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIR 156
+ S F NR P + I + WK LR + + F+S KL I
Sbjct: 75 VKECYSVFTNRR-PFGPVGFMKSAISIAE---DEEWKRLRSLLS-PTFTSGKLKEMVPII 129
Query: 157 RKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDL 200
+ L+ + G+ + + S++V+++T F V++
Sbjct: 130 AQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNI 173
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 65/164 (39%), Gaps = 14/164 (8%)
Query: 42 PGPTPYPVIGNLLELGDKPHKSLA----KLAKIHGPIMTLKFGQXXXXXXXXASMAKAIL 97
PGPTP P +GN+L HK + K +G + GQ M K +L
Sbjct: 17 PGPTPLPFLGNILSY----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVL 72
Query: 98 -QNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIR 156
+ S F NR P + I + WK LR + + F+S KL I
Sbjct: 73 VKECYSVFTNRR-PFGPVGFMKSAISIAE---DEEWKRLRSLLS-PTFTSGKLKEMVPII 127
Query: 157 RKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDL 200
+ L+ + G+ + + S++V+++T F V++
Sbjct: 128 AQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNI 171
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 16/209 (7%)
Query: 33 RKAGSEQQPPGPTPYPVIGNL--LELGDKPHKSLAKLAKIHGPIMTLKFGQXXXXXXXXA 90
+K G+ + P P++G+L L H + KL K +GPI +++ G
Sbjct: 3 KKTGA-KYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHH 61
Query: 91 SMAKAILQNHDSSFCNR--MVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHK 148
+AK +L F R M S N + G+ + W+ R++ + F+ K
Sbjct: 62 QLAKEVLIKKGKDFSGRPQMATLDIASNNRK--GIAFADSGAHWQLHRRLA-MATFALFK 118
Query: 149 LDANQDIRR---KKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLV--DP 203
D +Q + + ++I L + + GQ+I I VF NV+S F+ DP
Sbjct: 119 -DGDQKLEKIICQEISTLCDMLATHN--GQSIDISFPVFVAVTNVISLICFNTSYKNGDP 175
Query: 204 TAREFKDIVWGIMTELGKPNLSDNFPLLK 232
++ GI+ L K +L D P LK
Sbjct: 176 ELNVIQNYNEGIIDNLSKDSLVDLVPWLK 204
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In
Complex With Alpha-Naphthoflavone
Length = 495
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 24 MALSSFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG 80
MA+ + R + PP P +P++G++L LG PH +L+++++ +G ++ ++ G
Sbjct: 1 MAVLKGLRPRVPKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIG 57
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 32 RRKAGSEQQPPGPTPYPVIGNLLELGDKP-HKSLAKLAKIHGPIMTLKFGQXXXXXXXXA 90
++ + + PPGP+P PV+GNLL++ K +S +L + +G + T+ G
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 91 SMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRK--ICNLHIFSSHK 148
+ L + +F R A Q G+++ W+ LR+ + + F K
Sbjct: 63 DAIREALVDQAEAFSGRG-KIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGK 120
Query: 149 LDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNT-SLNVLSNTIFS--VDLVDP 203
+ I+ + VEE + A++ +F++ + N++ + +F D DP
Sbjct: 121 RSVEERIQEEA----RCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDP 174
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 32 RRKAGSEQQPPGPTPYPVIGNLLELGDKP-HKSLAKLAKIHGPIMTLKFGQXXXXXXXXA 90
++ + + PPGP+P PV+GNLL++ K +S +L + +G + T+ G
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 91 SMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRK--ICNLHIFSSHK 148
+ L + +F R A Q G+++ W+ LR+ + + F K
Sbjct: 63 DAIREALVDQAEAFSGRG-KIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGK 120
Query: 149 LDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNT-SLNVLSNTIFS--VDLVDP 203
+ I+ + VEE + A++ +F++ + N++ + +F D DP
Sbjct: 121 RSVEERIQEEA----RCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDP 174
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 32 RRKAGSEQQPPGPTPYPVIGNLLELGDKP-HKSLAKLAKIHGPIMTLKFGQXXXXXXXXA 90
++ + + PPGP+P PV+GNLL++ K +S +L + +G + T+ G
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 91 SMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRK--ICNLHIFSSHK 148
+ L + +F R A Q G+++ W+ LR+ + + F K
Sbjct: 63 DAIREALVDQAEAFSGRG-KIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGK 120
Query: 149 LDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNT-SLNVLSNTIFS--VDLVDP 203
+ I+ + VEE + A++ +F++ + N++ + +F D DP
Sbjct: 121 RSVEERIQEEA----RCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDP 174
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 32 RRKAGSEQQPPGPTPYPVIGNLLELGDKP-HKSLAKLAKIHGPIMTLKFGQXXXXXXXXA 90
++ + + PPGP+P PV+GNLL++ K +S +L + +G + T+ G
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 91 SMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRK--ICNLHIFSSHK 148
+ L + +F R A Q G+++ W+ LR+ + + F K
Sbjct: 63 DAIREALVDQAEAFSGRG-KIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGK 120
Query: 149 LDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNT-SLNVLSNTIFS--VDLVDP 203
+ I+ + VEE + A++ +F++ + N++ + +F D DP
Sbjct: 121 RSVEERIQEEA----RCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDP 174
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 32 RRKAGSEQQPPGPTPYPVIGNLLELGDKP-HKSLAKLAKIHGPIMTLKFGQXXXXXXXXA 90
++ + + PPGP+P PV+GNLL++ K +S +L + +G + T+ G
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 91 SMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRK--ICNLHIFSSHK 148
+ L + +F R A Q G+++ W+ LR+ + + F K
Sbjct: 63 DAIREALVDQAEAFSGRG-KIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGK 120
Query: 149 LDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNT-SLNVLSNTIFS--VDLVDP 203
+ I+ + VEE + A++ +F++ + N++ + +F D DP
Sbjct: 121 RSVEERIQEEA----RCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDP 174
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 42 PGPTPYPVIGNLLELG-----DKPHKSLAKLAKIHGPIMTLKFGQXXXXXXXXASMAKAI 96
PGPT +P++G+LLE+ K H +LA+ K +G I +K G S+ +A+
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEAL 86
Query: 97 LQNHDS 102
+ +
Sbjct: 87 YRTESA 92
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 27 SSFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLK 78
S Y RR + P P +G+ LE G K L ++ + HG I T++
Sbjct: 7 SVLYGRRTRRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVR 58
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 102 SSFCNRMVPDAACSYNHQEIGM---VWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRK 158
+ F M P CS +H ++ V P P ++C ++ ++ RK
Sbjct: 138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RK 194
Query: 159 KIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVD 199
+ LA NC VG+ +V+ A F S N+ S + D
Sbjct: 195 FVHRDLA--TRNCLVGENMVVKIADFGLSRNIYSADYYKAD 233
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,856,572
Number of Sequences: 62578
Number of extensions: 291525
Number of successful extensions: 592
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 556
Number of HSP's gapped (non-prelim): 34
length of query: 278
length of database: 14,973,337
effective HSP length: 98
effective length of query: 180
effective length of database: 8,840,693
effective search space: 1591324740
effective search space used: 1591324740
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)