Query 039787
Match_columns 278
No_of_seqs 223 out of 1609
Neff 11.6
Searched_HMMs 46136
Date Fri Mar 29 13:10:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039787.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039787hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.3E-36 5E-41 246.6 26.2 227 38-265 25-258 (489)
2 PLN02687 flavonoid 3'-monooxyg 100.0 6.1E-34 1.3E-38 238.9 25.2 230 35-265 30-263 (517)
3 PLN00110 flavonoid 3',5'-hydro 100.0 6.9E-32 1.5E-36 225.4 26.7 247 18-264 10-259 (504)
4 PLN03234 cytochrome P450 83B1; 100.0 1.1E-31 2.4E-36 224.9 26.2 231 34-264 23-257 (499)
5 PLN03112 cytochrome P450 famil 100.0 2E-31 4.3E-36 224.0 26.7 237 28-265 21-264 (514)
6 PLN02971 tryptophan N-hydroxyl 100.0 7.9E-31 1.7E-35 221.0 27.3 230 35-264 53-295 (543)
7 PTZ00404 cytochrome P450; Prov 100.0 2.6E-31 5.6E-36 221.8 23.3 233 28-264 18-256 (482)
8 PLN02183 ferulate 5-hydroxylas 100.0 6.8E-31 1.5E-35 220.5 25.6 224 37-264 34-257 (516)
9 PLN02966 cytochrome P450 83A1 100.0 3.4E-30 7.5E-35 215.7 23.7 237 25-262 15-256 (502)
10 PLN00168 Cytochrome P450; Prov 100.0 1.1E-29 2.3E-34 213.5 26.6 228 35-264 31-264 (519)
11 PLN02290 cytokinin trans-hydro 100.0 3E-29 6.6E-34 211.0 22.3 222 38-265 41-282 (516)
12 PLN02655 ent-kaurene oxidase 100.0 1.1E-28 2.4E-33 204.8 23.7 225 41-265 1-238 (466)
13 PLN02500 cytochrome P450 90B1 100.0 1.2E-28 2.5E-33 206.1 22.6 216 33-265 32-253 (490)
14 PLN02394 trans-cinnamate 4-mon 100.0 5.1E-28 1.1E-32 203.1 26.4 168 34-201 25-194 (503)
15 KOG0158 Cytochrome P450 CYP3/C 100.0 9.7E-28 2.1E-32 193.9 21.0 181 35-218 27-213 (499)
16 KOG0157 Cytochrome P450 CYP4/C 100.0 1.7E-27 3.7E-32 197.9 21.2 223 37-267 33-263 (497)
17 PLN02196 abscisic acid 8'-hydr 100.0 2.4E-27 5.2E-32 196.6 21.0 211 35-264 31-242 (463)
18 PF00067 p450: Cytochrome P450 100.0 2.2E-28 4.7E-33 203.7 13.2 224 41-268 1-234 (463)
19 PLN03018 homomethionine N-hydr 100.0 3.8E-26 8.2E-31 191.6 26.6 226 38-264 39-281 (534)
20 PLN02302 ent-kaurenoic acid ox 100.0 7.2E-26 1.6E-30 189.8 25.9 213 34-265 37-257 (490)
21 PLN02774 brassinosteroid-6-oxi 99.9 2E-26 4.4E-31 191.2 17.7 209 38-264 30-239 (463)
22 PLN03195 fatty acid omega-hydr 99.9 9.1E-26 2E-30 189.9 20.0 220 40-265 31-259 (516)
23 PLN02169 fatty acid (omega-1)- 99.9 2.3E-25 5E-30 186.0 21.4 217 40-264 32-265 (500)
24 PLN02987 Cytochrome P450, fami 99.9 5.2E-25 1.1E-29 182.4 20.8 224 21-265 13-242 (472)
25 PLN03141 3-epi-6-deoxocathaste 99.9 5E-25 1.1E-29 182.5 19.8 213 35-265 3-221 (452)
26 PLN02936 epsilon-ring hydroxyl 99.9 1.5E-24 3.2E-29 181.1 19.6 220 39-265 12-243 (489)
27 KOG0159 Cytochrome P450 CYP11/ 99.9 1.7E-24 3.7E-29 172.2 18.6 228 38-270 49-294 (519)
28 PLN02738 carotene beta-ring hy 99.9 1.1E-24 2.5E-29 185.1 18.6 207 51-263 143-355 (633)
29 PLN02426 cytochrome P450, fami 99.9 1.2E-20 2.5E-25 157.8 21.5 210 47-264 49-272 (502)
30 PLN02648 allene oxide synthase 99.9 1.1E-21 2.4E-26 161.9 12.0 159 37-201 15-193 (480)
31 KOG0684 Cytochrome P450 [Secon 99.8 5.4E-18 1.2E-22 132.6 17.5 217 39-266 31-249 (486)
32 COG2124 CypX Cytochrome P450 [ 99.5 9.4E-13 2E-17 107.7 15.3 183 61-264 25-212 (411)
33 PF06643 DUF1158: Protein of u 82.6 3.9 8.4E-05 24.0 3.9 34 1-34 45-78 (82)
34 KOG0114 Predicted RNA-binding 70.7 26 0.00056 22.7 5.8 60 38-99 11-76 (124)
35 COG4736 CcoQ Cbb3-type cytochr 57.8 34 0.00075 19.6 4.3 9 24-32 24-32 (60)
36 COG3105 Uncharacterized protei 50.0 42 0.00091 22.6 4.0 28 1-28 1-28 (138)
37 PF01102 Glycophorin_A: Glycop 49.4 32 0.00069 23.1 3.5 6 27-32 86-91 (122)
38 PF13625 Helicase_C_3: Helicas 47.6 62 0.0013 21.9 4.9 39 59-99 75-113 (129)
39 PRK12333 nucleoside triphospha 45.9 1.2E+02 0.0027 22.5 7.2 46 150-199 26-71 (204)
40 cd08318 Death_NMPP84 Death dom 41.1 88 0.0019 19.4 5.1 39 129-170 18-59 (86)
41 PF13893 RRM_5: RNA recognitio 40.8 63 0.0014 17.6 4.1 34 65-98 2-39 (56)
42 PF08138 Sex_peptide: Sex pept 39.5 16 0.00035 20.1 0.8 6 40-45 32-37 (56)
43 PF07125 DUF1378: Protein of u 38.4 73 0.0016 17.7 3.7 15 248-262 26-40 (59)
44 PRK14759 potassium-transportin 36.7 53 0.0011 15.6 3.4 7 20-26 15-21 (29)
45 PF09926 DUF2158: Uncharacteri 36.2 36 0.00077 19.0 1.9 18 71-88 3-20 (53)
46 cd08780 Death_TRADD Death Doma 34.8 1.2E+02 0.0026 19.1 5.3 69 129-197 13-89 (90)
47 PRK02302 hypothetical protein; 34.4 1.2E+02 0.0025 19.2 4.0 31 69-99 24-54 (89)
48 KOG3653 Transforming growth fa 33.1 2.6E+02 0.0056 24.2 6.9 14 70-83 222-235 (534)
49 PF07659 DUF1599: Domain of Un 32.8 89 0.0019 18.1 3.1 11 126-136 3-13 (61)
50 COG1707 ACT domain-containing 32.5 47 0.001 23.6 2.4 38 57-94 153-195 (218)
51 PF15330 SIT: SHP2-interacting 32.1 1.5E+02 0.0032 19.5 5.2 11 46-56 45-55 (107)
52 KOG0107 Alternative splicing f 31.5 1.3E+02 0.0028 21.9 4.3 47 49-97 14-64 (195)
53 cd08777 Death_RIP1 Death Domai 31.0 1.4E+02 0.0029 18.6 5.9 39 129-170 13-56 (86)
54 PLN03134 glycine-rich RNA-bind 30.9 1.8E+02 0.004 20.1 6.1 49 49-99 38-95 (144)
55 PLN03120 nucleic acid binding 30.9 2.6E+02 0.0056 21.8 7.0 57 49-107 8-70 (260)
56 PRK02886 hypothetical protein; 30.7 1.4E+02 0.0031 18.7 4.1 31 69-99 22-52 (87)
57 COG4471 Uncharacterized protei 30.2 1.4E+02 0.0031 18.7 4.1 32 68-99 22-53 (90)
58 PF14991 MLANA: Protein melan- 29.4 18 0.00039 23.7 0.0 13 85-97 96-108 (118)
59 PRK14473 F0F1 ATP synthase sub 29.2 98 0.0021 22.0 3.7 32 177-209 122-153 (164)
60 PF08780 NTase_sub_bind: Nucle 28.6 1.7E+02 0.0037 19.7 4.6 34 121-157 72-108 (124)
61 PRK11677 hypothetical protein; 28.4 88 0.0019 21.5 3.1 10 13-22 8-17 (134)
62 PRK15117 ABC transporter perip 27.5 2.7E+02 0.0058 20.9 6.2 64 154-217 29-102 (211)
63 PRK14471 F0F1 ATP synthase sub 27.2 1.1E+02 0.0024 21.7 3.7 23 178-201 123-145 (164)
64 PF08539 HbrB: HbrB-like; Int 25.4 2.5E+02 0.0055 19.9 5.3 33 129-162 6-38 (158)
65 PRK13460 F0F1 ATP synthase sub 25.4 1.2E+02 0.0026 21.8 3.6 24 177-201 130-153 (173)
66 COG1742 Uncharacterized conser 23.5 30 0.00066 22.3 0.2 50 26-77 21-70 (109)
67 PF10653 Phage-A118_gp45: Prot 22.1 1.2E+02 0.0027 16.5 2.3 30 135-169 22-51 (62)
68 PF14840 DNA_pol3_delt_C: Proc 21.8 2.2E+02 0.0048 19.2 4.1 56 130-191 64-119 (125)
69 PF13120 DUF3974: Domain of un 21.1 1.3E+02 0.0029 18.9 2.7 10 59-68 42-51 (126)
70 COG4052 Uncharacterized protei 20.9 1.6E+02 0.0035 22.4 3.5 25 245-269 199-223 (310)
71 PF09902 DUF2129: Uncharacteri 20.5 2.1E+02 0.0045 17.2 4.0 31 69-99 18-48 (71)
72 PRK10597 DNA damage-inducible 20.3 2.3E+02 0.005 17.5 4.2 36 63-98 25-68 (81)
73 TIGR01661 ELAV_HUD_SF ELAV/HuD 20.0 3.5E+02 0.0075 21.9 5.8 49 49-99 273-330 (352)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.3e-36 Score=246.60 Aligned_cols=227 Identities=30% Similarity=0.519 Sum_probs=197.3
Q ss_pred CCCCCCCCCCCeeeccccCCCC-chHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCc-hhhhhh
Q 039787 38 EQQPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMV-PDAACS 115 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~~~~~~-~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~-~~~~~~ 115 (278)
.+.||||+++|++||++++... +|..+.+|.++|||++.+++|..++|+++|+++++|++.+++..|++|+. ......
T Consensus 25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~ 104 (489)
T KOG0156|consen 25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY 104 (489)
T ss_pred CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence 7899999999999999999766 99999999999999999999999999999999999999999999999997 224455
Q ss_pred cccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHH
Q 039787 116 YNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTI 195 (278)
Q Consensus 116 ~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~ 195 (278)
+..++.|++++++|+.||.+||+.....|+...++.....-.++++.+++.+.+ ...+.+||+.+.+..++.+||++++
T Consensus 105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~~ 183 (489)
T KOG0156|consen 105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRML 183 (489)
T ss_pred hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHHH
Confidence 555679999998899999999999988899999999888889999999999976 3233789999999999999999999
Q ss_pred hcccccC---ccHHHHHHHHHHHHHHhCCCccccccc-cccccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 196 FSVDLVD---PTAREFKDIVWGIMTELGKPNLSDNFP-LLKKLD-LQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 196 fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
||.++.. +...++.+.+.+.....+.....+++| ++.+++ ..+..++......++..+++++|++|++..
T Consensus 184 fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~ 258 (489)
T KOG0156|consen 184 FGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI 258 (489)
T ss_pred hCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999943 344558889999999988888889999 677764 234566777777779999999999998865
No 2
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=6.1e-34 Score=238.94 Aligned_cols=230 Identities=33% Similarity=0.557 Sum_probs=181.3
Q ss_pred CCCCCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhh
Q 039787 35 AGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAAC 114 (278)
Q Consensus 35 ~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~ 114 (278)
++..+.||||.++|++|+++.+..+++..+.+|+++||++|++++|+.+.|+++||+++++++.++...|.+++......
T Consensus 30 ~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~ 109 (517)
T PLN02687 30 KHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAE 109 (517)
T ss_pred CCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchh
Confidence 34456889999999999998886678899999999999999999999999999999999999988778888876554433
Q ss_pred hcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHH
Q 039787 115 SYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNT 194 (278)
Q Consensus 115 ~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~ 194 (278)
.+...+.+.+++.+|+.|+++|+++++++|+.++++.+.+.+.++++++++.|.+.. +++++|+.+.++.+++|+++.+
T Consensus 110 ~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~~t~dvi~~~ 188 (517)
T PLN02687 110 HMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GTAPVNLGQLVNVCTTNALGRA 188 (517)
T ss_pred hhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHH
Confidence 333224456666669999999999975789999999999999999999999997532 4568999999999999999999
Q ss_pred Hhccccc----CccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 195 IFSVDLV----DPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 195 ~fG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
+||.++. ++..+.+.+.+.+++.......+...+|++.++++....++..+..+.+.+++.++|+++++..
T Consensus 189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 263 (517)
T PLN02687 189 MVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAG 263 (517)
T ss_pred HhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999872 2334567777777666544322335667665553333345666778889999999999887653
No 3
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=6.9e-32 Score=225.44 Aligned_cols=247 Identities=31% Similarity=0.477 Sum_probs=187.8
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHH
Q 039787 18 FTWLFVMALSSFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAIL 97 (278)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~ 97 (278)
.+++..+..+++.+....+..+.||||+++|++|+++.+...++..+.+++++||+++++++|+++.|+++||+++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl 89 (504)
T PLN00110 10 ATLLFFITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFL 89 (504)
T ss_pred HHHHHHHHHHHHHHHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHH
Confidence 34444445555555555555778999999999999887766678899999999999999999999999999999999999
Q ss_pred HhcCCCCCCCCchhhhhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCcc
Q 039787 98 QNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAI 177 (278)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~v 177 (278)
.++...|.+++..........++.+.+++.+|+.|+++|++++.++|+.++++.+.+.+.++++.+++.+.+...+|+++
T Consensus 90 ~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~ 169 (504)
T PLN00110 90 KTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPV 169 (504)
T ss_pred HhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcE
Confidence 88777888877544322221222334445559999999999984579999999999999999999999997644567789
Q ss_pred chHHHHHHHHHHHHHHHHhcccc-c--CccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHH
Q 039787 178 VIGQAVFNTSLNVLSNTIFSVDL-V--DPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVF 254 (278)
Q Consensus 178 d~~~~~~~~~~~vi~~~~fG~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~ 254 (278)
|+.+.+..+++|+|++++||.++ . +.+.+++.+++.+.+.......+...+|++.+++..+..+...+..+.+.+++
T Consensus 170 ~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~ 249 (504)
T PLN00110 170 VVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLL 249 (504)
T ss_pred eHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986 2 22345677777777665443334456776655433334466667788888999
Q ss_pred HHHHHHHHHh
Q 039787 255 DRLIDQRLDQ 264 (278)
Q Consensus 255 ~~~i~~~~~~ 264 (278)
.++|+++++.
T Consensus 250 ~~~i~~~~~~ 259 (504)
T PLN00110 250 TRMIEEHTAS 259 (504)
T ss_pred HHHHHHHHhh
Confidence 9999887764
No 4
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=1.1e-31 Score=224.94 Aligned_cols=231 Identities=25% Similarity=0.462 Sum_probs=178.4
Q ss_pred cCCCCCCCCCCCCCCeeeccccCCC-CchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhh
Q 039787 34 KAGSEQQPPGPTPYPVIGNLLELGD-KPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDA 112 (278)
Q Consensus 34 ~~~~~~~~pgp~~~p~~g~~~~~~~-~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~ 112 (278)
.+++.+.||||+++|++|+++.+.. +++.++.+++++||++|++++|+.++|+++||+++++|+.++...|.+++....
T Consensus 23 ~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~ 102 (499)
T PLN03234 23 TKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKG 102 (499)
T ss_pred cCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence 3444678999999999999988843 688899999999999999999999999999999999999887778888775433
Q ss_pred hhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHH
Q 039787 113 ACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLS 192 (278)
Q Consensus 113 ~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~ 192 (278)
.......+.++.+..+++.|+++|+.+..++|+.++++.+.+.+.+++++++++|.+....++++|+.+.+..+++|+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~ 182 (499)
T PLN03234 103 QQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVC 182 (499)
T ss_pred hhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHH
Confidence 32222223444444558999999998533899999999999999999999999997655567789999999999999999
Q ss_pred HHHhcccccC--ccHHHHHHHHHHHHHHhCCCccccccccccccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 193 NTIFSVDLVD--PTAREFKDIVWGIMTELGKPNLSDNFPLLKKLD-LQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 193 ~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+++||.+++. .+..++.+.+.+.............+|++.+++ +.+..++..++.+.+.+++.++|+++++.
T Consensus 183 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 257 (499)
T PLN03234 183 RQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDP 257 (499)
T ss_pred HHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999832 234556666665554433323344556544331 23445677889999999999999987653
No 5
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=2e-31 Score=224.03 Aligned_cols=237 Identities=27% Similarity=0.479 Sum_probs=179.8
Q ss_pred HHhhhccCCCCCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCC
Q 039787 28 SFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNR 107 (278)
Q Consensus 28 ~~~~~~~~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~ 107 (278)
.+.+++..++.+.||||+++|++||++.+..+++..+.+++++||+++++++++.+.|+++||+++++++.++...|.++
T Consensus 21 ~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~ 100 (514)
T PLN03112 21 RWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASR 100 (514)
T ss_pred HHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccC
Confidence 33344445556789999999999999887667888999999999999999999999999999999999998888888887
Q ss_pred Cchhhhhh-cccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHH
Q 039787 108 MVPDAACS-YNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNT 186 (278)
Q Consensus 108 ~~~~~~~~-~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~ 186 (278)
+....... ..+.+. .++..+|+.|+++|+++.+++|+.++++.+.+.+.++++.+++.+.+....+.++|+.+.++.+
T Consensus 101 ~~~~~~~~~~~g~~~-~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~ 179 (514)
T PLN03112 101 PRTLAAVHLAYGCGD-VALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAF 179 (514)
T ss_pred CCcccceeeccCCCc-eEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHH
Confidence 65432221 111223 3344459999999999654789999999999999999999999875433456789999999999
Q ss_pred HHHHHHHHHhcccccC------ccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 039787 187 SLNVLSNTIFSVDLVD------PTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQ 260 (278)
Q Consensus 187 ~~~vi~~~~fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (278)
++|++++++||.++.. ++..++.+.+..+........+...+|++.++++....++..++.+.+.++++++|++
T Consensus 180 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 259 (514)
T PLN03112 180 SMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDE 259 (514)
T ss_pred HHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998721 2234566666666554432233445676655422233466777888899999999988
Q ss_pred HHHhh
Q 039787 261 RLDQR 265 (278)
Q Consensus 261 ~~~~~ 265 (278)
+++..
T Consensus 260 ~~~~~ 264 (514)
T PLN03112 260 HRRAR 264 (514)
T ss_pred HHHhh
Confidence 77643
No 6
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=7.9e-31 Score=221.02 Aligned_cols=230 Identities=21% Similarity=0.311 Sum_probs=168.2
Q ss_pred CCCCCCCCCCCCCCeeeccccCC-CC-chHHHHHHHHHhC-CceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchh
Q 039787 35 AGSEQQPPGPTPYPVIGNLLELG-DK-PHKSLAKLAKIHG-PIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPD 111 (278)
Q Consensus 35 ~~~~~~~pgp~~~p~~g~~~~~~-~~-~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~ 111 (278)
.++.+.||||+++|++|+++.+. +. .+..+.+|.++|| +++++++|+.++|+++||+++++++.++...|.+++...
T Consensus 53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~ 132 (543)
T PLN02971 53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY 132 (543)
T ss_pred CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence 34567899999999999998773 22 3677889999999 899999999999999999999999998888898887544
Q ss_pred hhhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHH
Q 039787 112 AACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVL 191 (278)
Q Consensus 112 ~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi 191 (278)
....+..+..++++..+|+.|+++|++++++.|+...++.+.+.+.++++.+++.+.+...+++++|+.+.++++++|++
T Consensus 133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi 212 (543)
T PLN02971 133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAI 212 (543)
T ss_pred chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHH
Confidence 33333221123455556999999999997466776677778888888888888887654445668999999999999999
Q ss_pred HHHHhcccccC-------ccHHHHHHHHHHHHHHhCC---CccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 039787 192 SNTIFSVDLVD-------PTAREFKDIVWGIMTELGK---PNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQR 261 (278)
Q Consensus 192 ~~~~fG~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 261 (278)
++++||.++.. +...++.+.+.+.+..... ..+.+.+|++++++..+..+...++.+.+.+++.++|+++
T Consensus 213 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 292 (543)
T PLN02971 213 KRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDER 292 (543)
T ss_pred HHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998621 1112334444444433221 1234566766654323344556667788899999999888
Q ss_pred HHh
Q 039787 262 LDQ 264 (278)
Q Consensus 262 ~~~ 264 (278)
++.
T Consensus 293 ~~~ 295 (543)
T PLN02971 293 IKM 295 (543)
T ss_pred HHH
Confidence 654
No 7
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=2.6e-31 Score=221.81 Aligned_cols=233 Identities=21% Similarity=0.312 Sum_probs=175.6
Q ss_pred HHhhhccCCCCCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCC
Q 039787 28 SFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNR 107 (278)
Q Consensus 28 ~~~~~~~~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~ 107 (278)
..++...+...+.+|||+++|++|+++.+..+++..+.+++++||++|++++|++++|+++||+++++++.++...|.++
T Consensus 18 ~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r 97 (482)
T PTZ00404 18 NAYKKYKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDR 97 (482)
T ss_pred HHHHHhhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCC
Confidence 33444434446778999999999999888667899999999999999999999999999999999999998766667766
Q ss_pred CchhhhhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHH
Q 039787 108 MVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTS 187 (278)
Q Consensus 108 ~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~ 187 (278)
+......... .++|++..+ |+.|+++|++++ ++|+.++++.+.+.+.++++.+++.|.+....++++|+.+.+.+++
T Consensus 98 ~~~~~~~~~~-~~~~l~~~~-g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~ 174 (482)
T PTZ00404 98 PKIPSIKHGT-FYHGIVTSS-GEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFT 174 (482)
T ss_pred CCcceeeeec-cCCceeccC-hHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHH
Confidence 5443322111 257777765 999999999999 9999999999999999999999999975444567899999999999
Q ss_pred HHHHHHHHhcccccC-c-----cHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 039787 188 LNVLSNTIFSVDLVD-P-----TAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQR 261 (278)
Q Consensus 188 ~~vi~~~~fG~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 261 (278)
+|++++++||.++.. + ...++.+.+.+++...........++++..+ +..+.....+..+.+.+++.+.++++
T Consensus 175 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~ 253 (482)
T PTZ00404 175 MSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEH 253 (482)
T ss_pred HHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998732 1 1245677777766655433233333332221 12222334456777888888888776
Q ss_pred HHh
Q 039787 262 LDQ 264 (278)
Q Consensus 262 ~~~ 264 (278)
+++
T Consensus 254 ~~~ 256 (482)
T PTZ00404 254 LKT 256 (482)
T ss_pred HHc
Confidence 653
No 8
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=6.8e-31 Score=220.55 Aligned_cols=224 Identities=27% Similarity=0.491 Sum_probs=171.7
Q ss_pred CCCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhc
Q 039787 37 SEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSY 116 (278)
Q Consensus 37 ~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 116 (278)
..+.||||+++|++|+++.+....+..+.+|+++||++|++++++.+.|+++||+++++|+.++...|..++........
T Consensus 34 ~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~ 113 (516)
T PLN02183 34 RLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYL 113 (516)
T ss_pred CCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhcc
Confidence 35789999999999999877555677899999999999999999999999999999999998877778777654333223
Q ss_pred ccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHh
Q 039787 117 NHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIF 196 (278)
Q Consensus 117 ~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~f 196 (278)
...+.+.+++.+|+.|+++|+++..++|+.++++.+.+. .++++.+++.|.+ ..+.++|+.+.+.++++|++++++|
T Consensus 114 ~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~vi~~~~f 190 (516)
T PLN02183 114 TYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSS--NIGKPVNIGELIFTLTRNITYRAAF 190 (516)
T ss_pred ccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHHHHhHhh
Confidence 222223444445999999999853389999999988886 5688999999963 2467899999999999999999999
Q ss_pred cccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 197 SVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 197 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
|.+.+. ..+++.+.+..+............+|++.++++....++..++.+.+.+++.++|++++++
T Consensus 191 G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 257 (516)
T PLN02183 191 GSSSNE-GQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQK 257 (516)
T ss_pred cCcccc-hHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 998743 2356777776666554433345667776654222335667778888999999999887654
No 9
>PLN02966 cytochrome P450 83A1
Probab=99.98 E-value=3.4e-30 Score=215.73 Aligned_cols=237 Identities=27% Similarity=0.463 Sum_probs=170.3
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCeeeccccC-CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCC
Q 039787 25 ALSSFYKRRKAGSEQQPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSS 103 (278)
Q Consensus 25 ~~~~~~~~~~~~~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~ 103 (278)
+.++.+.+...+..+.||||+++|++|+++.+ ..+++..+.+|+++||++|++++++.+.|+++||+.+++|+.++...
T Consensus 15 ~~~~~~~~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~ 94 (502)
T PLN02966 15 LLFFLYQKPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVN 94 (502)
T ss_pred HHHHHHhccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCccc
Confidence 33444444444456789999999999999887 44688899999999999999999999999999999999999877777
Q ss_pred CCCCCchhhhhhcccCcccccccCCCchHHHHHhh-hhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHH
Q 039787 104 FCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKI-CNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQA 182 (278)
Q Consensus 104 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~-~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~ 182 (278)
|.+++..........+..++.+..+|+.|+++|++ ++ ++|+.++++.+.+.+.++++++++.|.+....++++|+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~ 173 (502)
T PLN02966 95 FADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMN-HLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISEL 173 (502)
T ss_pred ccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHH
Confidence 77665433222221122334344459999999999 65 99999999999999999999999999765455678999999
Q ss_pred HHHHHHHHHHHHHhcccccC--ccHHHHHHHHHHHHHHhCCCccccccccccccc-hhhHHHHHHHHHHHHHHHHHHHHH
Q 039787 183 VFNTSLNVLSNTIFSVDLVD--PTAREFKDIVWGIMTELGKPNLSDNFPLLKKLD-LQGIRRRMTIHYSKIFEVFDRLID 259 (278)
Q Consensus 183 ~~~~~~~vi~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~ 259 (278)
+..+++|+|+.++||.+++. ++..++.+++...........+...+|++..++ +++..+....+.+.+.+++.++++
T Consensus 174 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 253 (502)
T PLN02966 174 MLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVN 253 (502)
T ss_pred HHHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998832 233455555555444443333344555433221 222223334455666666777766
Q ss_pred HHH
Q 039787 260 QRL 262 (278)
Q Consensus 260 ~~~ 262 (278)
++.
T Consensus 254 ~~~ 256 (502)
T PLN02966 254 ETL 256 (502)
T ss_pred HHH
Confidence 654
No 10
>PLN00168 Cytochrome P450; Provisional
Probab=99.98 E-value=1.1e-29 Score=213.51 Aligned_cols=228 Identities=18% Similarity=0.266 Sum_probs=169.3
Q ss_pred CCCCCCCCCCCCCCeeeccccCC---CCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchh
Q 039787 35 AGSEQQPPGPTPYPVIGNLLELG---DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPD 111 (278)
Q Consensus 35 ~~~~~~~pgp~~~p~~g~~~~~~---~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~ 111 (278)
.+..+.||||+++|++|+++.+. ..++..+.+|+++||++|++++|+.+.|+++||+++++++.++...|.+++...
T Consensus 31 ~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~ 110 (519)
T PLN00168 31 KKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA 110 (519)
T ss_pred CCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence 34467899999999999987552 346788999999999999999999999999999999999988888888877644
Q ss_pred hhhhcccCcccccc-cCCCchHHHHHh-hhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHH
Q 039787 112 AACSYNHQEIGMVW-LPVSTPWKNLRK-ICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLN 189 (278)
Q Consensus 112 ~~~~~~~~g~~~~~-~~~g~~w~~~R~-~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~ 189 (278)
....+. .+.+++. ..+|+.|+++|| +++ ++|+.++++.+.+.+.++++++++.|.+....+..+|+.+.++.++++
T Consensus 111 ~~~~~~-~~~~~~~~~~~G~~Wk~~Rr~~~~-~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ 188 (519)
T PLN00168 111 SSRLLG-ESDNTITRSSYGPVWRLLRRNLVA-ETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFC 188 (519)
T ss_pred chhhhc-cCCCceeCCCCCHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHH
Confidence 333332 2233443 346999999987 566 999999999999999999999999997644444578999999999999
Q ss_pred HHHHHHhcccccCccHHHHHHHHHHHHHHhCC-CccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 190 VLSNTIFSVDLVDPTAREFKDIVWGIMTELGK-PNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 190 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+++.++||.++++...+.+.....+....... ..+...+|++.+....+..++..++.+.+.+++.++|+++++.
T Consensus 189 ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (519)
T PLN00168 189 LLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREY 264 (519)
T ss_pred HHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998543333343444333322221 1344556644322012224556678889999999999988764
No 11
>PLN02290 cytokinin trans-hydroxylase
Probab=99.97 E-value=3e-29 Score=210.97 Aligned_cols=222 Identities=15% Similarity=0.225 Sum_probs=161.6
Q ss_pred CCCCCCCCCCCeeeccccCC-------------------CCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHH
Q 039787 38 EQQPPGPTPYPVIGNLLELG-------------------DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~~~~-------------------~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~ 98 (278)
.+.||||+++|++||++.+. ++....+.+|+++||++|++++|+.+.|+++||+++++++.
T Consensus 41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~ 120 (516)
T PLN02290 41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT 120 (516)
T ss_pred HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence 55789999999999987762 12233568899999999999999999999999999999998
Q ss_pred hcCCCCCCCCchhhhhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCC-Ccc
Q 039787 99 NHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVG-QAI 177 (278)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~-~~v 177 (278)
++ ..+..++...........|.|+++++ |+.|+++|++++ ++|+.++++.+.+.+.++++++++.|.+....+ .++
T Consensus 121 ~~-~~~~~r~~~~~~~~~~~~g~~l~~~~-g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~v 197 (516)
T PLN02290 121 KY-NTVTGKSWLQQQGTKHFIGRGLLMAN-GADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEV 197 (516)
T ss_pred cC-CCCCCCcchhhhHHHHHhcCCccccC-chHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 75 33445543221111111256777766 999999999999 999999999999999999999999997643333 579
Q ss_pred chHHHHHHHHHHHHHHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHH
Q 039787 178 VIGQAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRL 257 (278)
Q Consensus 178 d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (278)
|+.+.++.+++|++++++||.++... +++.+.+.++............+|++.++ +.+..++.....+.+.+++.++
T Consensus 198 d~~~~~~~~~~~vi~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-p~~~~~~~~~~~~~~~~~~~~~ 274 (516)
T PLN02290 198 EIGEYMTRLTADIISRTEFDSSYEKG--KQIFHLLTVLQRLCAQATRHLCFPGSRFF-PSKYNREIKSLKGEVERLLMEI 274 (516)
T ss_pred EhHHHHHHHHHHHHHHHHcCCccccc--hHHHHHHHHHHHHHHHhhhhhcCchhhhC-CChhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987322 23333333333222111111234544444 2333456667788899999999
Q ss_pred HHHHHHhh
Q 039787 258 IDQRLDQR 265 (278)
Q Consensus 258 i~~~~~~~ 265 (278)
|+++++..
T Consensus 275 i~~~~~~~ 282 (516)
T PLN02290 275 IQSRRDCV 282 (516)
T ss_pred HHHHHHHh
Confidence 99887644
No 12
>PLN02655 ent-kaurene oxidase
Probab=99.97 E-value=1.1e-28 Score=204.81 Aligned_cols=225 Identities=21% Similarity=0.264 Sum_probs=167.1
Q ss_pred CCCCCCCCeeeccccCC-CCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcccC
Q 039787 41 PPGPTPYPVIGNLLELG-DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQ 119 (278)
Q Consensus 41 ~pgp~~~p~~g~~~~~~-~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 119 (278)
||||+++|++||++++. .+++..+.+|+++||++|++++|+.+.|+++||+++++++.++...|.+++.......+.+.
T Consensus 1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~ 80 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD 80 (466)
T ss_pred CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence 68999999999998884 55889999999999999999999999999999999999999888888887654433333322
Q ss_pred cccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhcc--CCCccchHHHHHHHHHHHHHHHHhc
Q 039787 120 EIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCR--VGQAIVIGQAVFNTSLNVLSNTIFS 197 (278)
Q Consensus 120 g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~--~~~~vd~~~~~~~~~~~vi~~~~fG 197 (278)
+.++++.++|+.|+++|+++.+++|+...++.+.+.+.+.++.+++.+.+... .++++|+.+.++.+|+|+++.++||
T Consensus 81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG 160 (466)
T PLN02655 81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG 160 (466)
T ss_pred CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence 33455555699999999877647788888888999999999999998864322 4567999999999999999999999
Q ss_pred ccccCcc----------HHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 198 VDLVDPT----------AREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 198 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
.+++... .+.+...+.+++.......+.+.+|++++++.....+...+....+.+++.++|++++++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 238 (466)
T PLN02655 161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRI 238 (466)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9873211 1223333444444433223445677766664333334444445566788888888877653
No 13
>PLN02500 cytochrome P450 90B1
Probab=99.97 E-value=1.2e-28 Score=206.10 Aligned_cols=216 Identities=16% Similarity=0.207 Sum_probs=158.2
Q ss_pred ccCCCCCCCCCCCCCCeeeccccC-C----CCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCC
Q 039787 33 RKAGSEQQPPGPTPYPVIGNLLEL-G----DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNR 107 (278)
Q Consensus 33 ~~~~~~~~~pgp~~~p~~g~~~~~-~----~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~ 107 (278)
...++.+.||||+++|++||++.+ . ..++..+.+++++||+++++++|++++|+++||+++++++.++...|.++
T Consensus 32 ~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~ 111 (490)
T PLN02500 32 PKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECS 111 (490)
T ss_pred cccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEee
Confidence 334556789999999999997643 1 34567789999999999999999999999999999999998777667544
Q ss_pred CchhhhhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhh-hHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHH
Q 039787 108 MVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDA-NQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNT 186 (278)
Q Consensus 108 ~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~ 186 (278)
........+ ++.++++.+ |+.|+++|++++ ++|+..+++. +.+.+.+.+..+++.|. .+..+|+.+.++++
T Consensus 112 ~~~~~~~~~--g~~~~~~~~-g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~ 183 (490)
T PLN02500 112 YPRSIGGIL--GKWSMLVLV-GDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWK----ENSTFSAQDEAKKF 183 (490)
T ss_pred CchHHHHHh--CcccccccC-CHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhC----CCCCEEehHHHHHH
Confidence 322222222 134677765 999999999998 9999999887 56788888888888775 34579999999999
Q ss_pred HHHHHHHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 187 SLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 187 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
++|++++++||.+.++.+.+++.+.+.+....... .|+ .+|.. ..++..++.+.+.+++.++|++++++.
T Consensus 184 ~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~p~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~ 253 (490)
T PLN02500 184 TFNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVS------APL--NFPGT-AYRKALKSRATILKFIERKMEERIEKL 253 (490)
T ss_pred HHHHHHHHHhCCCCCchHHHHHHHHHHHHHhhhhc------chh--cCCCc-ccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999986433344455544444433211 111 11111 134555678899999999999887654
No 14
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.97 E-value=5.1e-28 Score=203.06 Aligned_cols=168 Identities=24% Similarity=0.429 Sum_probs=137.9
Q ss_pred cCCCCCCCCCCCCCCeeeccccCCCC-chHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhh
Q 039787 34 KAGSEQQPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDA 112 (278)
Q Consensus 34 ~~~~~~~~pgp~~~p~~g~~~~~~~~-~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~ 112 (278)
..++.+.||||++.|++|+++.+..+ .+..+.+|+++||+++++++|+++.|+++||+.+++++.++...|.+++....
T Consensus 25 ~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~ 104 (503)
T PLN02394 25 RGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV 104 (503)
T ss_pred hcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence 33457889999999999999887433 57888999999999999999999999999999999999877777777654443
Q ss_pred hhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhcc-CCCccchHHHHHHHHHHHH
Q 039787 113 ACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCR-VGQAIVIGQAVFNTSLNVL 191 (278)
Q Consensus 113 ~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~vd~~~~~~~~~~~vi 191 (278)
...+.+.+.+.++..+|+.|+++|+++..++|+.++++.+.+.+.++++++++.|.+... .+..+|+.+.++.+++|++
T Consensus 105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi 184 (503)
T PLN02394 105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIM 184 (503)
T ss_pred HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHH
Confidence 343333344455555699999999998658899999999999999999999999965322 2456899999999999999
Q ss_pred HHHHhccccc
Q 039787 192 SNTIFSVDLV 201 (278)
Q Consensus 192 ~~~~fG~~~~ 201 (278)
++++||.++.
T Consensus 185 ~~~~fG~~~~ 194 (503)
T PLN02394 185 YRMMFDRRFE 194 (503)
T ss_pred HHHHhCCCcc
Confidence 9999999983
No 15
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.96 E-value=9.7e-28 Score=193.94 Aligned_cols=181 Identities=21% Similarity=0.304 Sum_probs=139.1
Q ss_pred CCCCCCCCCCCCCCeeeccccC--CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCC--ch
Q 039787 35 AGSEQQPPGPTPYPVIGNLLEL--GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRM--VP 110 (278)
Q Consensus 35 ~~~~~~~pgp~~~p~~g~~~~~--~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~--~~ 110 (278)
.+.++..|+|++.|++||+..+ .+.......+...++||++.++.+.++.++|.|||++++|+.++.++|.++. ..
T Consensus 27 yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~ 106 (499)
T KOG0158|consen 27 YWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIY 106 (499)
T ss_pred hhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCc
Confidence 3345577999999999999888 2333444444334449999999999999999999999999999999999853 22
Q ss_pred hhhhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHH
Q 039787 111 DAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNV 190 (278)
Q Consensus 111 ~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~v 190 (278)
..... .....+++.+. |+.||+.|..++ |.||+.+++.+.+.|.++++++++.+.+....+..+++.+.+.++|.||
T Consensus 107 ~d~~~-~l~~~~Lf~~~-g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DV 183 (499)
T KOG0158|consen 107 GDPED-PLSALNLFFLR-GERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDV 183 (499)
T ss_pred CCCCC-cccccCchhcc-CchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHH
Confidence 22221 11125566666 999999999999 9999999999999999999999999976443335788999999999999
Q ss_pred HHHHHhccccc--CccHHHHHHHHHHHHHH
Q 039787 191 LSNTIFSVDLV--DPTAREFKDIVWGIMTE 218 (278)
Q Consensus 191 i~~~~fG~~~~--~~~~~~~~~~~~~~~~~ 218 (278)
|++++||.+.+ .+...+|..........
T Consensus 184 I~~~AfG~~~~s~~d~~~~F~~~~~~~~~~ 213 (499)
T KOG0158|consen 184 IGSCAFGLDANSLRDPKAEFRRMGRRAFFL 213 (499)
T ss_pred HhHhhcccchhhhcCchHHHHHhhHHHHHH
Confidence 99999999982 23335566544444444
No 16
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.96 E-value=1.7e-27 Score=197.88 Aligned_cols=223 Identities=19% Similarity=0.303 Sum_probs=174.3
Q ss_pred CCCCCCCCCCCCeeeccccCC---CCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchh-h
Q 039787 37 SEQQPPGPTPYPVIGNLLELG---DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPD-A 112 (278)
Q Consensus 37 ~~~~~pgp~~~p~~g~~~~~~---~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~-~ 112 (278)
..+.||||+++|++|++..+. .....++.++..+||++|+.|+|+.+.|+++||+.+++|+.++...+.+.+.+. .
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~ 112 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES 112 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence 456789999999999998883 246667788999999999999999999999999999999976556555555444 3
Q ss_pred hhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHH
Q 039787 113 ACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLS 192 (278)
Q Consensus 113 ~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~ 192 (278)
...+ .|.|+++++ |+.|+++||+++ |+|+.+.++.+...+.+++..+...+.... .+..+|+++.++++|+|+||
T Consensus 113 ~~~~--lG~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tld~i~ 187 (497)
T KOG0157|consen 113 LKPW--LGDGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAA-SGEEVDLQDLLKRLTLDIIC 187 (497)
T ss_pred HHHH--hcCccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHHHHHH
Confidence 3333 367999998 999999999999 999999999999999999999888886522 33339999999999999999
Q ss_pred HHHhcccc---cCccHHHHHHHHHHHHHHhCCCccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 039787 193 NTIFSVDL---VDPTAREFKDIVWGIMTELGKPNLSDNFP-LLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQRQE 267 (278)
Q Consensus 193 ~~~fG~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 267 (278)
.++||... +.....++..++.++...+..+ ...| +..++.-.+..++..++.+.++++++++|++|+++..+
T Consensus 188 ~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~ 263 (497)
T KOG0157|consen 188 KTAMGPESLDAEGPELFEYVQAFDDLTELISKR---INLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEK 263 (497)
T ss_pred HHhcCCccccccCCcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999322 2334457777777666655432 1233 33332111257888999999999999999999987654
No 17
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.96 E-value=2.4e-27 Score=196.60 Aligned_cols=211 Identities=18% Similarity=0.232 Sum_probs=157.0
Q ss_pred CCCCCCCCCCCCCCeeeccccC-CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhh
Q 039787 35 AGSEQQPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA 113 (278)
Q Consensus 35 ~~~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~ 113 (278)
.++.+.||||+++|++|+++.+ .++++.++.+++++||+++++++++++.|+++||+++++++.++...|... .....
T Consensus 31 ~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~-~~~~~ 109 (463)
T PLN02196 31 STKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPT-FPASK 109 (463)
T ss_pred CCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccccc-CchHH
Confidence 3446788999999999998775 568899999999999999999999999999999999999998776666322 11111
Q ss_pred hhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHH
Q 039787 114 CSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSN 193 (278)
Q Consensus 114 ~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~ 193 (278)
.... ++.++++.+ |+.|+++|++++ +.|+.++++.+.+.+.++++++++.|. ++++|+.+.++.+++|+++.
T Consensus 110 ~~~~-g~~~l~~~~-g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~~ 181 (463)
T PLN02196 110 ERML-GKQAIFFHQ-GDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVALL 181 (463)
T ss_pred HHHc-CcccccccC-cHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHHH
Confidence 2221 234666665 999999999999 999999999999999999999999884 34689999999999999999
Q ss_pred HHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 194 TIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 194 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
++||.+... ....+.+..... .. ....+|+ .+ +....++..++.+.+.+++.++|+++++.
T Consensus 182 ~~fG~~~~~-~~~~~~~~~~~~----~~--~~~~~~~--~~-p~~~~~~~~~a~~~~~~~~~~~i~~~~~~ 242 (463)
T PLN02196 182 SIFGKDEVL-YREDLKRCYYIL----EK--GYNSMPI--NL-PGTLFHKSMKARKELAQILAKILSKRRQN 242 (463)
T ss_pred HHcCCCCch-HHHHHHHHHHHH----hc--chhcccc--cC-CCccchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999998521 112232222211 11 1112332 12 11223566778889999999999888754
No 18
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.96 E-value=2.2e-28 Score=203.70 Aligned_cols=224 Identities=25% Similarity=0.385 Sum_probs=180.9
Q ss_pred CCCCCCCCeeeccccCC--CCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhh--c
Q 039787 41 PPGPTPYPVIGNLLELG--DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACS--Y 116 (278)
Q Consensus 41 ~pgp~~~p~~g~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~--~ 116 (278)
||||+++|++|+++.+. ++++.++.+++++|||||+++++++++++|+||+++++|+.++...++.++....... .
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~ 80 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG 80 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence 79999999999999884 6788889999999999999999999999999999999999887666665533222221 1
Q ss_pred ccCcccccccCCCchHHHHHhhhhhhccCcc-hhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHH
Q 039787 117 NHQEIGMVWLPVSTPWKNLRKICNLHIFSSH-KLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTI 195 (278)
Q Consensus 117 ~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~ 195 (278)
...+.++++.+ |+.|+.+|++++ +.|+.. .+ .+.+.+.++++++++.|.+....++++|+.+.++.+++|++++++
T Consensus 81 ~~~~~~l~~~~-~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~ 157 (463)
T PF00067_consen 81 PFGGKGLFFSD-GERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL 157 (463)
T ss_dssp HHTTTSSTTSS-HHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccc-cccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence 23467888877 899999999999 899888 66 899999999999999998765555589999999999999999999
Q ss_pred hccccc---CccHHHHHHHHHHHHHHhCCC--ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 039787 196 FSVDLV---DPTAREFKDIVWGIMTELGKP--NLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQRQEH 268 (278)
Q Consensus 196 fG~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 268 (278)
||.++. +....++.+.+.++....... .+...+|++.++ +....+...++.+.+.+++.+++++++++.+.+
T Consensus 158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 234 (463)
T PF00067_consen 158 FGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEERREELDDG 234 (463)
T ss_dssp HSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS
T ss_pred ccceeeeccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccc
Confidence 999873 223346677777776544322 245567777766 455677888888999999999999999877665
No 19
>PLN03018 homomethionine N-hydroxylase
Probab=99.96 E-value=3.8e-26 Score=191.62 Aligned_cols=226 Identities=19% Similarity=0.268 Sum_probs=154.4
Q ss_pred CCCCCCCCCCCeeeccccCC-CCch-HHHHHHHHHh-CCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhh
Q 039787 38 EQQPPGPTPYPVIGNLLELG-DKPH-KSLAKLAKIH-GPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAAC 114 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~~~~-~~~~-~~~~~~~~~y-G~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~ 114 (278)
.+.||||+++|++|+++.+. ..+. .++.++.++| |+||++++|+.++|+++||+++++++.++...|++++......
T Consensus 39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~ 118 (534)
T PLN03018 39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME 118 (534)
T ss_pred CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence 45789999999999998873 2232 3455666666 7999999999999999999999999988888888887654444
Q ss_pred hcccCcccccccCCCchHHHHHhhhhhhccCcchhh-hhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHH
Q 039787 115 SYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLD-ANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSN 193 (278)
Q Consensus 115 ~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~-~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~ 193 (278)
.+...+.+++++.+|+.|+++|++++ +.|...... .+.+.+.++++++++.+.+....+.++|+.+.++.+++|++++
T Consensus 119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~ 197 (534)
T PLN03018 119 TIGDNYKSMGTSPYGEQFMKMKKVIT-TEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMR 197 (534)
T ss_pred hhccCCCceEecCCCHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHH
Confidence 34322345777767999999999999 776555444 4445556678999999975333456799999999999999999
Q ss_pred HHhcccccC--------cc-HHHHHHHHHHHHHH---hCCCccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 039787 194 TIFSVDLVD--------PT-AREFKDIVWGIMTE---LGKPNLSDNFP-LLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQ 260 (278)
Q Consensus 194 ~~fG~~~~~--------~~-~~~~~~~~~~~~~~---~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (278)
++||.++.. .. .+.+.......... .......+.+| |+++++..+...+.......+.+++.++|++
T Consensus 198 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 277 (534)
T PLN03018 198 MLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDE 277 (534)
T ss_pred HHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 999998721 11 11122122222221 11111223334 4443212233445555677888999999988
Q ss_pred HHHh
Q 039787 261 RLDQ 264 (278)
Q Consensus 261 ~~~~ 264 (278)
+++.
T Consensus 278 ~~~~ 281 (534)
T PLN03018 278 RVEL 281 (534)
T ss_pred HHHH
Confidence 8754
No 20
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.95 E-value=7.2e-26 Score=189.80 Aligned_cols=213 Identities=16% Similarity=0.180 Sum_probs=152.6
Q ss_pred cCCCCCCCCCCCCCCeeeccccC-----CCCchHHHHHHHHHhCC--ceEEeccCeeEEEecCHHHHHHHHHhcCCCCCC
Q 039787 34 KAGSEQQPPGPTPYPVIGNLLEL-----GDKPHKSLAKLAKIHGP--IMTLKFGQVTTVVVSSASMAKAILQNHDSSFCN 106 (278)
Q Consensus 34 ~~~~~~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~--i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~ 106 (278)
..+..+.||||+++|++|+++.+ .++++.++.+++++||+ ++++++++.+.|+++||+++++|+.++ ..|.+
T Consensus 37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~ 115 (490)
T PLN02302 37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEP 115 (490)
T ss_pred ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Ccccc
Confidence 34446789999999999998765 24688899999999997 799999999999999999999999764 45554
Q ss_pred CCchhhhhhcccCcccccccCCCchHHHHHhhhhhhccC-cchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHH
Q 039787 107 RMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFS-SHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFN 185 (278)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~ 185 (278)
+........+ |.+.+...+|+.|+++|++++ +.|+ .++++.+.+.+.++++++++.|. .++.+|+.+.++.
T Consensus 116 ~~~~~~~~~~---g~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~----~~~~v~~~~~~~~ 187 (490)
T PLN02302 116 GWPESTVELI---GRKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWS----KMGEIEFLTELRK 187 (490)
T ss_pred CCchhHHHHh---ccccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhc----CCCCEehHHHHHH
Confidence 4332222222 333333334999999999999 8885 67899999999999999999986 2346999999999
Q ss_pred HHHHHHHHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 186 TSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 186 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
++++++++++||.++.. ..+++...+........ .++. .+|.. ..++..++.+.+.+++.+.|+++++..
T Consensus 188 ~~~~vi~~~~~G~~~~~-~~~~~~~~~~~~~~~~~------~~~~--~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~ 257 (490)
T PLN02302 188 LTFKIIMYIFLSSESEL-VMEALEREYTTLNYGVR------AMAI--NLPGF-AYHRALKARKKLVALFQSIVDERRNSR 257 (490)
T ss_pred HHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHHhh------hCCc--CCCch-hhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999998632 22333332222221111 0110 11111 133445677888999999999887653
No 21
>PLN02774 brassinosteroid-6-oxidase
Probab=99.95 E-value=2e-26 Score=191.23 Aligned_cols=209 Identities=14% Similarity=0.134 Sum_probs=155.2
Q ss_pred CCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcc
Q 039787 38 EQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYN 117 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~ 117 (278)
.+.||||+++|++|+++.+..++..++.+++++||++|++++++++.++++||+++++++.++...|.++........+
T Consensus 30 ~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~l- 108 (463)
T PLN02774 30 KGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDIL- 108 (463)
T ss_pred CCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHHh-
Confidence 4678999999999998877556778899999999999999999999999999999999998766665443222222222
Q ss_pred cCcccccccCCCchHHHHHhhhhhhccCcchhhh-hHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHh
Q 039787 118 HQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDA-NQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIF 196 (278)
Q Consensus 118 ~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~f 196 (278)
++.+++..+ |+.|+++|++++ ++|+...++. +.+.+.+.+++++++|. .++++|+.+.+..+++++++.++|
T Consensus 109 -g~~~~~~~~-g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~ 181 (463)
T PLN02774 109 -GTCNIAAVH-GSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWD----GLKTIDIQEKTKEMALLSALKQIA 181 (463)
T ss_pred -CccchhhcC-CHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhC----CCCCEEeeHHHHHHHHHHHHHHHc
Confidence 234666655 999999999998 9999999886 78999999999988885 345799999999999999999999
Q ss_pred cccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 197 SVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 197 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
|.+.. ....++.+.+.+..... ..+|. ++|. ...++..++++.+.+++.+.|++++++
T Consensus 182 g~~~~-~~~~~~~~~~~~~~~~~------~~~~~--~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~ 239 (463)
T PLN02774 182 GTLSK-PISEEFKTEFFKLVLGT------LSLPI--DLPG-TNYRSGVQARKNIVRMLRQLIQERRAS 239 (463)
T ss_pred CCCCh-HHHHHHHHHHHHHhccc------ccCCc--CCCC-hhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 98752 21233333333322110 11221 2211 224566678899999999999988754
No 22
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.94 E-value=9.1e-26 Score=189.88 Aligned_cols=220 Identities=15% Similarity=0.154 Sum_probs=152.2
Q ss_pred CCCCCCCCCeeeccccCCCCchHHHHHHHHHh---CCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhh-hh
Q 039787 40 QPPGPTPYPVIGNLLELGDKPHKSLAKLAKIH---GPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA-CS 115 (278)
Q Consensus 40 ~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~y---G~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~-~~ 115 (278)
.+|||+++|++|+++.+.. .+..+.+|.++| |++|++++|+.+.|+++||+.+++|+.++...|.+++..... ..
T Consensus 31 ~~pgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~ 109 (516)
T PLN03195 31 NRKGPKSWPIIGAALEQLK-NYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV 109 (516)
T ss_pred ccCCCCCCCeecchHHHHh-ccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH
Confidence 4689999999999876522 244567777777 899999999999999999999999997755566655332211 12
Q ss_pred cccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHH-HHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHH
Q 039787 116 YNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIR-RKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNT 194 (278)
Q Consensus 116 ~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~-~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~ 194 (278)
+ .|.|++..+ |+.|+++|++++ ++|+.++++.+.+.+ .+.++.+.+.+.+....+.++|+.+.++.+++|+|+.+
T Consensus 110 ~--~g~~l~~~~-g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~ 185 (516)
T PLN03195 110 L--LGDGIFNVD-GELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKV 185 (516)
T ss_pred H--hcCeeeccC-cHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHH
Confidence 2 256776655 999999999999 999999999999876 56677777777653335678999999999999999999
Q ss_pred HhcccccCc----cHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 195 IFSVDLVDP----TAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 195 ~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
+||.++... ....+.+.+.......... ....++.+.++-.....+...++.+.+.+++.++|++++++.
T Consensus 186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 259 (516)
T PLN03195 186 GFGVEIGTLSPSLPENPFAQAFDTANIIVTLR-FIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEM 259 (516)
T ss_pred HhCCCccccccCCCccHHHHHHHHHHHHHHHH-HhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988211 1234555544433221100 111111111110112234455677888999999998887653
No 23
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.94 E-value=2.3e-25 Score=186.04 Aligned_cols=217 Identities=12% Similarity=0.133 Sum_probs=155.3
Q ss_pred CCCCCCCCCeeeccccCCCC---chHHHHHHHHHhCCceE---EeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhh
Q 039787 40 QPPGPTPYPVIGNLLELGDK---PHKSLAKLAKIHGPIMT---LKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA 113 (278)
Q Consensus 40 ~~pgp~~~p~~g~~~~~~~~---~~~~~~~~~~~yG~i~~---~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~ 113 (278)
..|||+++|++|++..+.+. .+..+.+...+||..++ .++|+.+.|+++||+++++|+.++...|.+++.....
T Consensus 32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~ 111 (500)
T PLN02169 32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI 111 (500)
T ss_pred CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence 46899999999998766322 22333444445786655 5778899999999999999998877777776533322
Q ss_pred hhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhh--HHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHH
Q 039787 114 CSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDAN--QDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVL 191 (278)
Q Consensus 114 ~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~--~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi 191 (278)
... .|.|+++++ |+.|+++||+++ |+|+...+..+ .+.+.++++.+++.+.+....+.++|+.+.+.++|+|+|
T Consensus 112 ~~~--~g~gl~~~~-g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi 187 (500)
T PLN02169 112 FDV--LGEGILTVD-FELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS 187 (500)
T ss_pred HHh--hcCcccccC-cHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence 222 368898887 999999999999 99999887643 366778888898888755446678999999999999999
Q ss_pred HHHHhcccccC----ccHHHHHHHHHHHHHHhCCCccccccccc-----cccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 039787 192 SNTIFSVDLVD----PTAREFKDIVWGIMTELGKPNLSDNFPLL-----KKLDLQGIRRRMTIHYSKIFEVFDRLIDQRL 262 (278)
Q Consensus 192 ~~~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 262 (278)
++++||.+.+. ....++.+.+......... ....|++ .++ ..+..++..++.+.+.+++.++|++|+
T Consensus 188 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~I~~r~ 263 (500)
T PLN02169 188 SILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWI-GIGLERKMRTALATVNRMFAKIISSRR 263 (500)
T ss_pred HhheeCCCccccCCCCCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHh-CCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998721 1123555555444332211 1122321 121 234467788899999999999999887
Q ss_pred Hh
Q 039787 263 DQ 264 (278)
Q Consensus 263 ~~ 264 (278)
++
T Consensus 264 ~~ 265 (500)
T PLN02169 264 KE 265 (500)
T ss_pred HH
Confidence 64
No 24
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.94 E-value=5.2e-25 Score=182.40 Aligned_cols=224 Identities=14% Similarity=0.180 Sum_probs=152.6
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCeeeccccCC-----CCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHH
Q 039787 21 LFVMALSSFYKRRKAGSEQQPPGPTPYPVIGNLLELG-----DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKA 95 (278)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~g~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~ 95 (278)
+.++..++..+. ...+.+.||||.++|++|+++.+. .+++.++.+++++||+++++++++.+.|+++||+++++
T Consensus 13 ~~~~~~~~~~~~-~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~ 91 (472)
T PLN02987 13 LAAIFFLLLRRT-RYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRF 91 (472)
T ss_pred HHHHHHHHHHhh-ccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHH
Confidence 333333344443 344467889999999999998762 45788889999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCchhhhhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHH-HHHHHHHHHHHHHHHhccCC
Q 039787 96 ILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQD-IRRKKIKHLLAYVEENCRVG 174 (278)
Q Consensus 96 i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~~~~~~~~~ 174 (278)
++.++...|.++........+ ++.|+++++ |+.|+++|+++. +.++.+.++.+.. .+.+.++..++.|.
T Consensus 92 il~~~~~~f~~~~~~~~~~~l--g~~~l~~~~-g~~wr~~R~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~------ 161 (472)
T PLN02987 92 ILQNEGKLFECSYPGSISNLL--GKHSLLLMK-GNLHKKMHSLTM-SFANSSIIKDHLLLDIDRLIRFNLDSWS------ 161 (472)
T ss_pred HHhCCCceEEecCcHHHHHHh--CcccccccC-cHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHhhc------
Confidence 998877777655432222323 246788876 999999999986 6444445544321 12333333344332
Q ss_pred CccchHHHHHHHHHHHHHHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHH
Q 039787 175 QAIVIGQAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVF 254 (278)
Q Consensus 175 ~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~ 254 (278)
+++++.+.+.+++++++++++||.+..+ ..+.+.+.+....... ....+|++ ....++..++++++.+++
T Consensus 162 ~~v~~~~~~~~~t~~vi~~~~fg~~~~~-~~~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~ 231 (472)
T PLN02987 162 SRVLLMEEAKKITFELTVKQLMSFDPGE-WTESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEAL 231 (472)
T ss_pred cceehHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHH
Confidence 3689999999999999999999987622 1223333333222211 11224432 123567778899999999
Q ss_pred HHHHHHHHHhh
Q 039787 255 DRLIDQRLDQR 265 (278)
Q Consensus 255 ~~~i~~~~~~~ 265 (278)
.++|+++++..
T Consensus 232 ~~~i~~r~~~~ 242 (472)
T PLN02987 232 TLVVMKRRKEE 242 (472)
T ss_pred HHHHHHHHhhh
Confidence 99999988754
No 25
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.94 E-value=5e-25 Score=182.48 Aligned_cols=213 Identities=15% Similarity=0.239 Sum_probs=155.4
Q ss_pred CCCCCCCCCCCCCCeeeccccC-----CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCc
Q 039787 35 AGSEQQPPGPTPYPVIGNLLEL-----GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMV 109 (278)
Q Consensus 35 ~~~~~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~ 109 (278)
+++.+.||||.++|++|+++.+ ..+++.++.+++++||+||++++|+.+.|+++||+++++++.++...|..+..
T Consensus 3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~ 82 (452)
T PLN03141 3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP 82 (452)
T ss_pred CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence 3456788999999999998876 24678889999999999999999999999999999999999887777765532
Q ss_pred hhhhhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhh-hHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHH
Q 039787 110 PDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDA-NQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSL 188 (278)
Q Consensus 110 ~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~ 188 (278)
. ....+.+ +.++++.+ |+.|+++|++++ ++|+..++.. ..+.+.+.++++++.|. .+..+|+.+.+..+++
T Consensus 83 ~-~~~~l~g-~~~~~~~~-g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 154 (452)
T PLN03141 83 K-SLTELMG-KSSILLIN-GSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIAF 154 (452)
T ss_pred h-hHHHHhC-cccccccC-cHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHH
Confidence 2 2222222 24566665 999999999998 8998887765 35566666666666654 4567899999999999
Q ss_pred HHHHHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 189 NVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 189 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
+++++++||.+..+ +..++.+.+.++..... .+|+ ++|.+. .++..++.+++.+++.++|+++++..
T Consensus 155 ~vi~~~~~G~~~~~-~~~~~~~~~~~~~~~~~------~~~~--~~p~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~ 221 (452)
T PLN03141 155 EVLVKALISLEPGE-EMEFLKKEFQEFIKGLM------SLPI--KLPGTR-LYRSLQAKKRMVKLVKKIIEEKRRAM 221 (452)
T ss_pred HHHHHHHcCCCchH-HHHHHHHHHHHHhhhHH------hCcc--CCCchH-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987522 23344444444433221 1221 121222 34455778999999999999887654
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=99.93 E-value=1.5e-24 Score=181.08 Aligned_cols=220 Identities=20% Similarity=0.230 Sum_probs=164.6
Q ss_pred CCCCCCCCCCeeeccccC-----CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhh
Q 039787 39 QQPPGPTPYPVIGNLLEL-----GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA 113 (278)
Q Consensus 39 ~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~ 113 (278)
++-.|-.++|++|..++. .+.++..+.+|+++|||++++++|+.+.|+++||+++++|+.+....|.+++.....
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~ 91 (489)
T PLN02936 12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS 91 (489)
T ss_pred ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence 344678899999987766 577889999999999999999999999999999999999998766777776543322
Q ss_pred hhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHH-HHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHH
Q 039787 114 CSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQD-IRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLS 192 (278)
Q Consensus 114 ~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~ 192 (278)
..+ .|.++++.+ |+.|+++||+++ +.|+..++..+.+ .+.++++.+++.|.+....+.++|+.+.++.+++|+++
T Consensus 92 ~~~--~~~~i~~~~-g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~ 167 (489)
T PLN02936 92 EFL--FGSGFAIAE-GELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIG 167 (489)
T ss_pred HHH--hcCccccCC-chHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence 222 256777766 999999999999 9999888887755 78889999999997655456789999999999999999
Q ss_pred HHHhcccccCc-cHHHHHHHHHHHHHHhCCCccccccccc-----cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 193 NTIFSVDLVDP-TAREFKDIVWGIMTELGKPNLSDNFPLL-----KKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 193 ~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
.++||.+++.. ...++.+.+...+...... ....+|++ .++ .+..++..++.+.+.+++.++|+++++..
T Consensus 168 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~l~~~--~p~~~~~~~~~~~i~~~~~~~i~~~~~~~ 243 (489)
T PLN02936 168 LSVFNYNFDSLTTDSPVIQAVYTALKEAETR-STDLLPYWKVDFLCKI--SPRQIKAEKAVTVIRETVEDLVDKCKEIV 243 (489)
T ss_pred HHHcCCCccccccCcHHHHHHHHHHHHHHHh-hhccchHHhhHHHhcc--ChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998321 1134555554443332211 12233422 121 12345677888999999999998877654
No 27
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=1.7e-24 Score=172.17 Aligned_cols=228 Identities=18% Similarity=0.265 Sum_probs=184.8
Q ss_pred CCCCCCCCCCCeeeccccC----CCCchHHHHHHHHHhCCceEEe-ccCeeEEEecCHHHHHHHHHhcCCCCCCCC-c--
Q 039787 38 EQQPPGPTPYPVIGNLLEL----GDKPHKSLAKLAKIHGPIMTLK-FGQVTTVVVSSASMAKAILQNHDSSFCNRM-V-- 109 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~~~----~~~~~~~~~~~~~~yG~i~~~~-~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~-~-- 109 (278)
...+|||.++|++|.++.+ ..+.|+.....+++|||||+.. +|+...|++.||+.++.++.+.+ .+.-|+ .
T Consensus 49 ~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~~ 127 (519)
T KOG0159|consen 49 FEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLIE 127 (519)
T ss_pred hhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccccc
Confidence 3456899999999998844 3567888899999999999999 78899999999999999997644 345553 1
Q ss_pred -hhhhhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhcc---CCCccchHHHHHH
Q 039787 110 -PDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCR---VGQAIVIGQAVFN 185 (278)
Q Consensus 110 -~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~---~~~~vd~~~~~~~ 185 (278)
....+.......|++..+ |++|++.|..+++...++++++.+.+.+++.++++++.+.+..+ ...+.|+.+.+.+
T Consensus 128 ~w~~~rd~~~~~~Gl~~~~-G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~ 206 (519)
T KOG0159|consen 128 PWVAYRDFRGGVCGLFLLE-GPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYR 206 (519)
T ss_pred hhhhhHHhhccCCCcccCC-CHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence 122344445567888887 99999999999977799999999999999999999999965443 3457899999999
Q ss_pred HHHHHHHHHHhcccc------cCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 039787 186 TSLNVLSNTIFSVDL------VDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLID 259 (278)
Q Consensus 186 ~~~~vi~~~~fG~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 259 (278)
++++.||.++||.++ .+++.+.|++++.+++..... +....++++++ .++.+++..++.+.+.++++++|+
T Consensus 207 wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~--l~~~p~l~r~~-~t~~wk~~~~~~D~i~~~~~~~Id 283 (519)
T KOG0159|consen 207 WSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQ--LMLMPSLWRYF-PTKVWKDFVRAWDQIFDVGDKYID 283 (519)
T ss_pred HHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHH--HHhcchHHHhC-CChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 235678899999999987764 22333677777 677789999999999999999999
Q ss_pred HHHHhhhcCCC
Q 039787 260 QRLDQRQEHGY 270 (278)
Q Consensus 260 ~~~~~~~~~~~ 270 (278)
++.++.+.++.
T Consensus 284 ~~l~~l~~~~~ 294 (519)
T KOG0159|consen 284 NALEELEKQDS 294 (519)
T ss_pred HHHHHHHhccc
Confidence 88877665443
No 28
>PLN02738 carotene beta-ring hydroxylase
Probab=99.93 E-value=1.1e-24 Score=185.06 Aligned_cols=207 Identities=17% Similarity=0.280 Sum_probs=149.3
Q ss_pred eccccC-CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcccCcccccccCCC
Q 039787 51 GNLLEL-GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVS 129 (278)
Q Consensus 51 g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 129 (278)
|++..+ ++..+..+.+++++|||||++++|+.++|+++||+.+++||.++...|.+++........ .+.|+++.+ |
T Consensus 143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~l~~~d-g 219 (633)
T PLN02738 143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKGLIPAD-G 219 (633)
T ss_pred CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCceecCC-c
Confidence 443444 466778899999999999999999999999999999999998776677765433222222 256777665 9
Q ss_pred chHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHhcccccC-ccHHHH
Q 039787 130 TPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLVD-PTAREF 208 (278)
Q Consensus 130 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~-~~~~~~ 208 (278)
+.|+.+|++++ ++|+...++.+.+.+.++++.++++|.+....++++|+.+.++.+|+|||+.++||.+++. .+.+++
T Consensus 220 e~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~ 298 (633)
T PLN02738 220 EIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGI 298 (633)
T ss_pred HHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHH
Confidence 99999999999 9999999999999999999999999976555678999999999999999999999999832 112344
Q ss_pred HHHHHHHHHHhCCCccc----cccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039787 209 KDIVWGIMTELGKPNLS----DNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLD 263 (278)
Q Consensus 209 ~~~~~~~~~~~~~~~~~----~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 263 (278)
.+.+.+.+......... ..+|++..+ +...++..++.+.+.+++.++++.+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~~~~l~~~~~~li~~~~~ 355 (633)
T PLN02738 299 VEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEALKLINDTLDDLIAICKR 355 (633)
T ss_pred HHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444443322111011 112222222 222455556667777777777765543
No 29
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.88 E-value=1.2e-20 Score=157.80 Aligned_cols=210 Identities=14% Similarity=0.099 Sum_probs=147.0
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhC-CceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhh-hhhcccCccccc
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHG-PIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDA-ACSYNHQEIGMV 124 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 124 (278)
.++.|+....-.+.+..+..+.++++ .+++++.++. ++++||+.+++|+.++...|.+...... ...+ .|.|++
T Consensus 49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~--~g~gi~ 124 (502)
T PLN02426 49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL--LGRGIF 124 (502)
T ss_pred CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh--cCCcee
Confidence 45677776543455667767788876 5777766554 8999999999999877667766543322 2222 267888
Q ss_pred ccCCCchHHHHHhhhhhhccCcchhhhhH--HHHHHHHHHHHHHHHHhcc--CCCccchHHHHHHHHHHHHHHHHhcccc
Q 039787 125 WLPVSTPWKNLRKICNLHIFSSHKLDANQ--DIRRKKIKHLLAYVEENCR--VGQAIVIGQAVFNTSLNVLSNTIFSVDL 200 (278)
Q Consensus 125 ~~~~g~~w~~~R~~~~~~~f~~~~l~~~~--~~~~~~~~~l~~~~~~~~~--~~~~vd~~~~~~~~~~~vi~~~~fG~~~ 200 (278)
+++ |+.|+++||+++ +.|+.++++.+. +.+.+.++.+++.+.+..+ .+.++|+.++++++++|+|+.++||.++
T Consensus 125 ~~~-g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~ 202 (502)
T PLN02426 125 NVD-GDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP 202 (502)
T ss_pred ecC-cHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence 776 999999999999 999999998764 6777778888888865332 2467999999999999999999999997
Q ss_pred cC----ccHHHHHHHHHHHHHHhCCCcccccccccc----ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 201 VD----PTAREFKDIVWGIMTELGKPNLSDNFPLLK----KLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 201 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+. ....++.+++..+....... ....+|++. +++ .+..++..++.+.+.+++.++|+++++.
T Consensus 203 ~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~I~~r~~~ 272 (502)
T PLN02426 203 GCLELSLPISEFADAFDTASKLSAER-AMAASPLLWKIKRLLN-IGSERKLKEAIKLVDELAAEVIRQRRKL 272 (502)
T ss_pred cccCCCCCccHHHHHHHHHHHHHHHH-HhcchhHHHHHHHhcc-cchhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 21 12345666665544322111 111223221 221 2335677788899999999999998764
No 30
>PLN02648 allene oxide synthase
Probab=99.87 E-value=1.1e-21 Score=161.86 Aligned_cols=159 Identities=8% Similarity=0.082 Sum_probs=126.6
Q ss_pred CCCCCCCCCCCCeeeccccC-----CCCchHHHHHHHHHhCC-ceEEeccCeeE-------EEecCHHHHHHHHHh----
Q 039787 37 SEQQPPGPTPYPVIGNLLEL-----GDKPHKSLAKLAKIHGP-IMTLKFGQVTT-------VVVSSASMAKAILQN---- 99 (278)
Q Consensus 37 ~~~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~-i~~~~~~~~~~-------v~i~dp~~~~~i~~~---- 99 (278)
+.+.|||+.++|++|+...+ ..++..++.+.++|||+ ||+++++|.++ |+++||+.++.++.+
T Consensus 15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~ 94 (480)
T PLN02648 15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD 94 (480)
T ss_pred CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence 45679999999999999754 45667999999999999 99999988665 999999999999964
Q ss_pred cCCCCCCCCchhhhhhcccCcc---cccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCc
Q 039787 100 HDSSFCNRMVPDAACSYNHQEI---GMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQA 176 (278)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~ 176 (278)
+...+..... .... +. ++. +++..+ |+.|+++|+++. ++|+ ..++.+.+.|.++++++++.|......+..
T Consensus 95 ~~~~~~~~~~-~~~~-l~-G~~~~~s~~~~~-g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~ 168 (480)
T PLN02648 95 KRDVFTGTYM-PSTA-FT-GGYRVLSYLDPS-EPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGK 168 (480)
T ss_pred ccccceeeec-cCcc-cc-CCceeeeecCCC-CchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCC
Confidence 3333443222 2223 32 223 444444 999999999999 9999 577899999999999999999643234557
Q ss_pred cchHHHHHHHHHHHHHHHHhccccc
Q 039787 177 IVIGQAVFNTSLNVLSNTIFSVDLV 201 (278)
Q Consensus 177 vd~~~~~~~~~~~vi~~~~fG~~~~ 201 (278)
+|+.+.++++++|++++++||.+.+
T Consensus 169 vdv~~~~~~lt~~vi~~~lfG~~~~ 193 (480)
T PLN02648 169 AEFNDPLDQMAFNFLCKALTGKDPS 193 (480)
T ss_pred ccccchHHHHHHHHHHHHHcCCCcc
Confidence 9999999999999999999999763
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.80 E-value=5.4e-18 Score=132.55 Aligned_cols=217 Identities=12% Similarity=0.086 Sum_probs=152.2
Q ss_pred CCCCCCC-CCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcc
Q 039787 39 QQPPGPT-PYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYN 117 (278)
Q Consensus 39 ~~~pgp~-~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~ 117 (278)
+.||.-. ++|++|....++.++.+++++.++|||+||++.++|+.+-++.+|+....++..+....+-........ ..
T Consensus 31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~-~~ 109 (486)
T KOG0684|consen 31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT-TP 109 (486)
T ss_pred CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh-hh
Confidence 4666544 479999999999999999999999999999999999999999999999999966533433221111111 11
Q ss_pred cCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHH-HHHhccCCCccchHHHHHHHHHHHHHHHHh
Q 039787 118 HQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAY-VEENCRVGQAIVIGQAVFNTSLNVLSNTIF 196 (278)
Q Consensus 118 ~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~-~~~~~~~~~~vd~~~~~~~~~~~vi~~~~f 196 (278)
.-|+|+.....+....++.+++. .+....+++++.+.|.++..+.++. |.+ .|++-.+.+....+.+.+.-.+++
T Consensus 110 vFg~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~ll~ 185 (486)
T KOG0684|consen 110 VFGKGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLLLG 185 (486)
T ss_pred hcCCCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHhhh
Confidence 11677876666788889989887 8899999999999999999998887 542 444444555555555555444445
Q ss_pred cccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 039787 197 SVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQRQ 266 (278)
Q Consensus 197 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 266 (278)
|..... ..+++...+.++...+.. +...||. ++|++. .|+..++++.+.+.+..+|.+||+..+
T Consensus 186 ~e~r~~-~d~~~a~l~~dLd~~F~~--~d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~s 249 (486)
T KOG0684|consen 186 GEVRDQ-LDADVAKLYHDLDQGFQP--FDFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASIS 249 (486)
T ss_pred hhhhhh-hcchHHHHHHHHhccccc--hHhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 554322 123444455555554443 3445663 443444 556669999999999999999987653
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.50 E-value=9.4e-13 Score=107.68 Aligned_cols=183 Identities=19% Similarity=0.176 Sum_probs=128.6
Q ss_pred hHHHHHHHHHhCCceEEeccCee--EEEecCHHHHHHHHHhcCCCCCCCCchhhhh--hcccCccc-ccccCCCchHHHH
Q 039787 61 HKSLAKLAKIHGPIMTLKFGQVT--TVVVSSASMAKAILQNHDSSFCNRMVPDAAC--SYNHQEIG-MVWLPVSTPWKNL 135 (278)
Q Consensus 61 ~~~~~~~~~~yG~i~~~~~~~~~--~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~g~~-~~~~~~g~~w~~~ 135 (278)
......+.+.||.++++...++. .+++++++.+++++.++. .+++........ .....|.+ +++.+ |+.|+++
T Consensus 25 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~d-g~~H~r~ 102 (411)
T COG2124 25 RFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLD-GPEHTRL 102 (411)
T ss_pred hhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecC-CHHHHHH
Confidence 34445667778888888765554 899999999999997653 222221111110 11112444 55555 9999999
Q ss_pred HhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHhcccccCccHHHHHHHHHHH
Q 039787 136 RKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGI 215 (278)
Q Consensus 136 R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~ 215 (278)
||+++ ++|+++.++.+.+.+.+.++++++.+ + .+...++.+.+..+++++|+ .+||.+..+ ...+.......
T Consensus 103 Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~---~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~--~~~~~~~~~~~ 174 (411)
T COG2124 103 RKLLA-PAFTPRALRGYRPLIREIADRLLDDL-W---QGGADLVLDFAAELTLRVIA-ELLGVPLED--RPQLLRWSDAL 174 (411)
T ss_pred HHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-c---cCCchhHHHHhhhhhHHHHH-HHhCCCHHH--HHHHHHHHHHH
Confidence 99999 99999999999999999999999998 3 22678899999999999999 999998622 23333333333
Q ss_pred HHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 216 MTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 216 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
..... |... ......+..++..++.+++.++|++||.+
T Consensus 175 ~~~~~--------~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~~ 212 (411)
T COG2124 175 LLRLD--------PDLG---PEEPWRRARAARRELDAYLRALIAERRAA 212 (411)
T ss_pred HhccC--------cccC---CcccHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 33210 1111 12235677789999999999999999853
No 33
>PF06643 DUF1158: Protein of unknown function (DUF1158); InterPro: IPR010590 This family consists of several enterobacterial YbdJ proteins. The function of this family is unknown
Probab=82.61 E-value=3.9 Score=23.99 Aligned_cols=34 Identities=15% Similarity=0.346 Sum_probs=18.5
Q ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 039787 1 MRVLKMDHMLSCILWLLFTWLFVMALSSFYKRRK 34 (278)
Q Consensus 1 ~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 34 (278)
||++|..+....+..+++..+=+++..++|+++.
T Consensus 45 ~DlnQlYTl~FClWFLlLGaiEy~viRfiwrRwf 78 (82)
T PF06643_consen 45 MDLNQLYTLVFCLWFLLLGAIEYFVIRFIWRRWF 78 (82)
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 4455544444444444455555666677777654
No 34
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=70.70 E-value=26 Score=22.71 Aligned_cols=60 Identities=22% Similarity=0.185 Sum_probs=40.3
Q ss_pred CCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccC------eeEEEecCHHHHHHHHHh
Q 039787 38 EQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQ------VTTVVVSSASMAKAILQN 99 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~------~~~v~i~dp~~~~~i~~~ 99 (278)
.+.||.-..+-++-|++. .-..+.+-++.-+||+|..+.+|. .-.||-.|-..++....+
T Consensus 11 ~rlppevnriLyirNLp~--~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh 76 (124)
T KOG0114|consen 11 IRLPPEVNRILYIRNLPF--KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH 76 (124)
T ss_pred CCCChhhheeEEEecCCc--cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence 445555555556666543 234556778888999999998863 457777787777777644
No 35
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=57.79 E-value=34 Score=19.61 Aligned_cols=9 Identities=11% Similarity=0.180 Sum_probs=3.7
Q ss_pred HHHHHHhhh
Q 039787 24 MALSSFYKR 32 (278)
Q Consensus 24 ~~~~~~~~~ 32 (278)
.+.++.++.
T Consensus 24 avi~~ayr~ 32 (60)
T COG4736 24 AVIYFAYRP 32 (60)
T ss_pred HHHHHHhcc
Confidence 334444443
No 36
>COG3105 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.00 E-value=42 Score=22.62 Aligned_cols=28 Identities=11% Similarity=-0.121 Sum_probs=14.4
Q ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 039787 1 MRVLKMDHMLSCILWLLFTWLFVMALSS 28 (278)
Q Consensus 1 ~~~~~m~~~~~~~~~~~~~~~~~~~~~~ 28 (278)
|++.-|......+.+++++++.+++..+
T Consensus 1 ~nwt~~~W~~a~igLvvGi~IG~li~Rl 28 (138)
T COG3105 1 MNWTFMTWEYALIGLVVGIIIGALIARL 28 (138)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455555555555555555544433
No 37
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=49.41 E-value=32 Score=23.13 Aligned_cols=6 Identities=0% Similarity=-0.114 Sum_probs=2.3
Q ss_pred HHHhhh
Q 039787 27 SSFYKR 32 (278)
Q Consensus 27 ~~~~~~ 32 (278)
++++|+
T Consensus 86 y~irR~ 91 (122)
T PF01102_consen 86 YCIRRL 91 (122)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 38
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=47.58 E-value=62 Score=21.85 Aligned_cols=39 Identities=10% Similarity=0.165 Sum_probs=29.7
Q ss_pred CchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHh
Q 039787 59 KPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 59 ~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~ 99 (278)
+....+.+|.++||.+--. .+...+...|++.++++...
T Consensus 75 ~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~ 113 (129)
T PF13625_consen 75 NVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLAD 113 (129)
T ss_pred HHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhC
Confidence 4455788999999986442 24677888999999999854
No 39
>PRK12333 nucleoside triphosphate pyrophosphohydrolase; Reviewed
Probab=45.91 E-value=1.2e+02 Score=22.53 Aligned_cols=46 Identities=7% Similarity=0.109 Sum_probs=26.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHhccc
Q 039787 150 DANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVD 199 (278)
Q Consensus 150 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~ 199 (278)
.++.+.+.+++.++++.+. .+..-++.+.+..+.+.|+..+-.+.+
T Consensus 26 ~SL~~yllEE~yEv~dAI~----~~d~~~l~EELGDlLlqVvfha~iaee 71 (204)
T PRK12333 26 ESLRPYLLEEAAEAVDALS----EGDPQELAEELGDVLLQVAFHSVIAEE 71 (204)
T ss_pred HHHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777777777765 334445666666666655555554443
No 40
>cd08318 Death_NMPP84 Death domain of Nuclear Matrix Protein P84. Death domain (DD) found in the Nuclear Matrix Protein P84 (also known as HPR1 or THOC1). HPR1/p84 resides in the nuclear matrix and is part of the THO complex, also called TREX (transcription/export) complex, which functions in mRNP biogenesis at the interface between transcription and export of mRNA from the nucleus. Mice lacking THOC1 have abnormal testis development and are sterile. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=41.11 E-value=88 Score=19.42 Aligned_cols=39 Identities=18% Similarity=0.292 Sum_probs=26.6
Q ss_pred CchHHHHHhhhhhhccCcchhhhhHH---HHHHHHHHHHHHHHHh
Q 039787 129 STPWKNLRKICNLHIFSSHKLDANQD---IRRKKIKHLLAYVEEN 170 (278)
Q Consensus 129 g~~w~~~R~~~~~~~f~~~~l~~~~~---~~~~~~~~l~~~~~~~ 170 (278)
|..|++.=+-+. |+...+..+.. -..+.+.+++..|.+.
T Consensus 18 G~~Wk~Lar~LG---ls~~dI~~i~~~~~~~~eq~~~mL~~W~~r 59 (86)
T cd08318 18 GEDWKTLAPHLE---MKDKEIRAIESDSEDIKMQAKQLLVAWQDR 59 (86)
T ss_pred hhhHHHHHHHcC---CCHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 888998755443 66666654442 2468889999999754
No 41
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=40.78 E-value=63 Score=17.65 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=24.8
Q ss_pred HHHHHHhCCceEEecc----CeeEEEecCHHHHHHHHH
Q 039787 65 AKLAKIHGPIMTLKFG----QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 65 ~~~~~~yG~i~~~~~~----~~~~v~i~dp~~~~~i~~ 98 (278)
.+...+||+|..+.+. +.-.|-..+++.++....
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~ 39 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE 39 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 4567889999888753 445667779999888875
No 42
>PF08138 Sex_peptide: Sex peptide (SP) family; InterPro: IPR012608 This family consists of Sex Peptides (SP) that are found in Drosophila. On mating, Drosophila females decreases her remating rate and increases her egg-laying rate due, in part, to the transfer of SP from the male to the female. SP are found in seminal fluids transferred from the male to the female during mating. The male seminal fluid proteins are referred to as accessory gland proteins (Acps). The SP is one of the most interesting Acps and plays an important role in reproduction [].; GO: 0005179 hormone activity, 0046008 regulation of female receptivity, post-mating, 0005576 extracellular region; PDB: 2LAQ_A.
Probab=39.50 E-value=16 Score=20.06 Aligned_cols=6 Identities=33% Similarity=0.739 Sum_probs=2.2
Q ss_pred CCCCCC
Q 039787 40 QPPGPT 45 (278)
Q Consensus 40 ~~pgp~ 45 (278)
..|+|.
T Consensus 32 ~i~sp~ 37 (56)
T PF08138_consen 32 PIPSPN 37 (56)
T ss_dssp SSSS-S
T ss_pred CCCCCC
Confidence 335554
No 43
>PF07125 DUF1378: Protein of unknown function (DUF1378); InterPro: IPR009808 This entry is represented by Bacteriophage 933W, Orf25. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of hypothetical bacterial and phage proteins of around 59 residues in length. Bacterial members of this family seem to be specific to Enterobacteria. The function of this family is unknown.
Probab=38.38 E-value=73 Score=17.72 Aligned_cols=15 Identities=33% Similarity=0.359 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHH
Q 039787 248 SKIFEVFDRLIDQRL 262 (278)
Q Consensus 248 ~~~~~~~~~~i~~~~ 262 (278)
..+++|+++.|+.+-
T Consensus 26 k~IRnY~r~Kid~aA 40 (59)
T PF07125_consen 26 KVIRNYFRRKIDDAA 40 (59)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344555555555443
No 44
>PRK14759 potassium-transporting ATPase subunit F; Provisional
Probab=36.65 E-value=53 Score=15.61 Aligned_cols=7 Identities=14% Similarity=0.316 Sum_probs=2.6
Q ss_pred HHHHHHH
Q 039787 20 WLFVMAL 26 (278)
Q Consensus 20 ~~~~~~~ 26 (278)
+++++++
T Consensus 15 L~vYL~~ 21 (29)
T PRK14759 15 LLIYLTY 21 (29)
T ss_pred HHHHHHH
Confidence 3333333
No 45
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=36.18 E-value=36 Score=18.97 Aligned_cols=18 Identities=28% Similarity=0.361 Sum_probs=15.2
Q ss_pred hCCceEEeccCeeEEEec
Q 039787 71 HGPIMTLKFGQVTTVVVS 88 (278)
Q Consensus 71 yG~i~~~~~~~~~~v~i~ 88 (278)
-|+++++.-||+.+.|..
T Consensus 3 ~GDvV~LKSGGp~MTV~~ 20 (53)
T PF09926_consen 3 IGDVVQLKSGGPRMTVTE 20 (53)
T ss_pred CCCEEEEccCCCCeEEEE
Confidence 389999999999988873
No 46
>cd08780 Death_TRADD Death Domain of Tumor Necrosis Factor Receptor 1-Associated Death Domain protein. Death domain (DD) of TRADD (TNF Receptor 1-Associated Death Domain or TNFRSF1A-associated via death domain) protein. TRADD is a central signaling adaptor for TNF-receptor 1 (TNFR1), mediating activation of Nuclear Factor -kappaB (NF-kB) and c-Jun N-terminal kinase (JNK), as well as caspase-dependent apoptosis. It also carries important immunological roles including germinal center formation, DR3-mediated T-cell stimulation, and TNFalpha-mediated inflammatory responses. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into s
Probab=34.77 E-value=1.2e+02 Score=19.09 Aligned_cols=69 Identities=13% Similarity=0.163 Sum_probs=38.2
Q ss_pred CchHHHHHhhhh--hhccCcchhhhhH----HH-HHHHHHHHHHHHHHhccCCCcc-chHHHHHHHHHHHHHHHHhc
Q 039787 129 STPWKNLRKICN--LHIFSSHKLDANQ----DI-RRKKIKHLLAYVEENCRVGQAI-VIGQAVFNTSLNVLSNTIFS 197 (278)
Q Consensus 129 g~~w~~~R~~~~--~~~f~~~~l~~~~----~~-~~~~~~~l~~~~~~~~~~~~~v-d~~~~~~~~~~~vi~~~~fG 197 (278)
|..||+.=+-+. ..+++...+.... .- +.+.+.+++.+|.........+ .+...+...-++.+..-++|
T Consensus 13 Gr~WK~laR~Lg~~cral~d~~ID~I~~~y~r~gL~EqvyQ~L~~W~~~eg~~Atv~~Lv~AL~~c~l~~lAe~l~~ 89 (90)
T cd08780 13 GKKWKPVGRSLQKNCRALRDPAIDNLAYEYDREGLYEQAYQLLRRFIQSEGKKATLQRLVQALEENGLTSLAEDLLG 89 (90)
T ss_pred hHHHHHHHHHHcccccccchhHHHHHHhhcccccHHHHHHHHHHHHHHhccccchHHHHHHHHHHccchHHHHHHhc
Confidence 889998744432 1236666666543 23 7888999999997532222222 23444444445544444443
No 47
>PRK02302 hypothetical protein; Provisional
Probab=34.38 E-value=1.2e+02 Score=19.17 Aligned_cols=31 Identities=13% Similarity=0.010 Sum_probs=24.1
Q ss_pred HHhCCceEEeccCeeEEEecCHHHHHHHHHh
Q 039787 69 KIHGPIMTLKFGQVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 69 ~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~ 99 (278)
++||+|+.+.--.+-.++-.|-+.+.++..+
T Consensus 24 rkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k 54 (89)
T PRK02302 24 SKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE 54 (89)
T ss_pred hhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 6799999886555677777788888888744
No 48
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=33.09 E-value=2.6e+02 Score=24.17 Aligned_cols=14 Identities=7% Similarity=0.074 Sum_probs=8.1
Q ss_pred HhCCceEEeccCee
Q 039787 70 IHGPIMTLKFGQVT 83 (278)
Q Consensus 70 ~yG~i~~~~~~~~~ 83 (278)
+||.|++-.+-++.
T Consensus 222 rfg~V~KaqL~~~~ 235 (534)
T KOG3653|consen 222 RFGCVWKAQLDNRL 235 (534)
T ss_pred ccceeehhhccCce
Confidence 46777666554433
No 49
>PF07659 DUF1599: Domain of Unknown Function (DUF1599); InterPro: IPR011630 This entry is represented by Clostridium phage phiCTP1, Gp74. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=32.79 E-value=89 Score=18.05 Aligned_cols=11 Identities=18% Similarity=0.564 Sum_probs=8.1
Q ss_pred cCCCchHHHHH
Q 039787 126 LPVSTPWKNLR 136 (278)
Q Consensus 126 ~~~g~~w~~~R 136 (278)
.++|+.|+..|
T Consensus 3 ~DYG~awr~~r 13 (61)
T PF07659_consen 3 HDYGDAWRIMR 13 (61)
T ss_pred ccHHHHHHHHC
Confidence 35788898765
No 50
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=32.52 E-value=47 Score=23.59 Aligned_cols=38 Identities=26% Similarity=0.449 Sum_probs=29.2
Q ss_pred CCCchHHHHHHHHHhC-CceEEeccCe----eEEEecCHHHHH
Q 039787 57 GDKPHKSLAKLAKIHG-PIMTLKFGQV----TTVVVSSASMAK 94 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG-~i~~~~~~~~----~~v~i~dp~~~~ 94 (278)
++...+..+++.+++| |++.++++|. --++++||-.+-
T Consensus 153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAG 195 (218)
T COG1707 153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAG 195 (218)
T ss_pred cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhh
Confidence 5677888999999999 9999987652 346788886543
No 51
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=32.09 E-value=1.5e+02 Score=19.45 Aligned_cols=11 Identities=36% Similarity=0.323 Sum_probs=7.4
Q ss_pred CCCeeeccccC
Q 039787 46 PYPVIGNLLEL 56 (278)
Q Consensus 46 ~~p~~g~~~~~ 56 (278)
.-|..||+...
T Consensus 45 ~~p~YgNL~~~ 55 (107)
T PF15330_consen 45 DDPCYGNLELQ 55 (107)
T ss_pred CCccccccccc
Confidence 35778887654
No 52
>KOG0107 consensus Alternative splicing factor SRp20/9G8 (RRM superfamily) [RNA processing and modification]
Probab=31.49 E-value=1.3e+02 Score=21.85 Aligned_cols=47 Identities=17% Similarity=0.207 Sum_probs=31.7
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEec----cCeeEEEecCHHHHHHHH
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKF----GQVTTVVVSSASMAKAIL 97 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~----~~~~~v~i~dp~~~~~i~ 97 (278)
++||+.. ......++....+||++..+|+ +|.-.|=.-||..+.+..
T Consensus 14 YVGnL~~--~a~k~eLE~~F~~yG~lrsvWvArnPPGfAFVEFed~RDA~DAv 64 (195)
T KOG0107|consen 14 YVGNLGS--RATKRELERAFSKYGPLRSVWVARNPPGFAFVEFEDPRDAEDAV 64 (195)
T ss_pred EeccCCC--CcchHHHHHHHHhcCcceeEEEeecCCCceEEeccCcccHHHHH
Confidence 4566642 2334456777889999999986 345667777777666654
No 53
>cd08777 Death_RIP1 Death Domain of Receptor-Interacting Protein 1. Death domain (DD) found in Receptor-Interacting Protein 1 (RIP1) and related proteins. RIP kinases serve as essential sensors of cellular stress. Vertebrates contain several types containing a homologous N-terminal kinase domain and varying C-terminal domains. RIP1 harbors a C-terminal DD, which binds death receptors (DRs) including TNF receptor 1, Fas, TNF-related apoptosis-inducing ligand receptor 1 (TRAILR1), and TRAILR2. It also interacts with other DD-containing adaptor proteins such as TRADD and FADD. RIP1 plays a crucial role in determining a cell's fate, between survival or death, following exposure to stress signals. It is important in the signaling of NF-kappaB and MAPKs, and it links DR-associated signaling to reactive oxygen species (ROS) production. Abnormal RIP1 function may result in ROS accumulation affecting inflammatory responses, innate immunity, stress responses, and cell survival. In general, DDs ar
Probab=31.02 E-value=1.4e+02 Score=18.63 Aligned_cols=39 Identities=13% Similarity=0.309 Sum_probs=29.3
Q ss_pred CchHHHHHhhhhhhccCcchhhhhHHH-----HHHHHHHHHHHHHHh
Q 039787 129 STPWKNLRKICNLHIFSSHKLDANQDI-----RRKKIKHLLAYVEEN 170 (278)
Q Consensus 129 g~~w~~~R~~~~~~~f~~~~l~~~~~~-----~~~~~~~l~~~~~~~ 170 (278)
|..|+..=+-+- |+...+..+... +.+.+.+++..|.+.
T Consensus 13 G~~Wk~lar~LG---~s~~eI~~ie~~~~r~~~~eq~~~mL~~W~~r 56 (86)
T cd08777 13 GKKWKRCARKLG---FTESEIEEIDHDYERDGLKEKVHQMLHKWKMK 56 (86)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHhcccCCHHHHHHHHHHHHHHc
Confidence 889998755543 787888777643 577899999999753
No 54
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=30.93 E-value=1.8e+02 Score=20.12 Aligned_cols=49 Identities=20% Similarity=0.155 Sum_probs=35.2
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
+++++.. ......+.++.++||+|..+.+. +.-.|-..+++.++.++..
T Consensus 38 fVgnL~~--~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~ 95 (144)
T PLN03134 38 FIGGLSW--GTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 (144)
T ss_pred EEeCCCC--CCCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 4455542 34556788888999998877652 3467788899999999864
No 55
>PLN03120 nucleic acid binding protein; Provisional
Probab=30.91 E-value=2.6e+02 Score=21.85 Aligned_cols=57 Identities=12% Similarity=0.219 Sum_probs=40.1
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEec------cCeeEEEecCHHHHHHHHHhcCCCCCCC
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKF------GQVTTVVVSSASMAKAILQNHDSSFCNR 107 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~------~~~~~v~i~dp~~~~~i~~~~~~~~~~~ 107 (278)
++||+.. .-....++++...||+|..+.+ .+.-.|...+++.++..+.-+...+.++
T Consensus 8 fVgNLs~--~tTE~dLrefFS~~G~I~~V~I~~d~~~~GfAFVtF~d~eaAe~AllLnG~~l~gr 70 (260)
T PLN03120 8 KVSNVSL--KATERDIKEFFSFSGDIEYVEMQSENERSQIAYVTFKDPQGAETALLLSGATIVDQ 70 (260)
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEeCcHHHHHHHHHhcCCeeCCc
Confidence 3455532 3445567788889999988876 2457788889999999986655555444
No 56
>PRK02886 hypothetical protein; Provisional
Probab=30.66 E-value=1.4e+02 Score=18.71 Aligned_cols=31 Identities=10% Similarity=0.127 Sum_probs=24.1
Q ss_pred HHhCCceEEeccCeeEEEecCHHHHHHHHHh
Q 039787 69 KIHGPIMTLKFGQVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 69 ~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~ 99 (278)
++||+|+.+.--.+-.|+-.|-+.+.++..+
T Consensus 22 rkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k 52 (87)
T PRK02886 22 RKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK 52 (87)
T ss_pred hhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 6799999886555677777788888888744
No 57
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.20 E-value=1.4e+02 Score=18.65 Aligned_cols=32 Identities=9% Similarity=0.104 Sum_probs=25.3
Q ss_pred HHHhCCceEEeccCeeEEEecCHHHHHHHHHh
Q 039787 68 AKIHGPIMTLKFGQVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 68 ~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~ 99 (278)
-++||+|+...--.+-.+.-++.+.+.+++.+
T Consensus 22 LrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k 53 (90)
T COG4471 22 LRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK 53 (90)
T ss_pred HHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence 46799999886555677778899999999854
No 58
>PF14991 MLANA: Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P 2GUO_C 3MRQ_P 2GTW_C 3L6F_C 3MRP_P.
Probab=29.44 E-value=18 Score=23.66 Aligned_cols=13 Identities=23% Similarity=0.194 Sum_probs=0.5
Q ss_pred EEecCHHHHHHHH
Q 039787 85 VVVSSASMAKAIL 97 (278)
Q Consensus 85 v~i~dp~~~~~i~ 97 (278)
||-+-|-+.+.|-
T Consensus 96 vVPnAPPAYeKis 108 (118)
T PF14991_consen 96 VVPNAPPAYEKIS 108 (118)
T ss_dssp -------B-----
T ss_pred cCCCCCchhhhcc
Confidence 4445555555443
No 59
>PRK14473 F0F1 ATP synthase subunit B; Provisional
Probab=29.17 E-value=98 Score=21.97 Aligned_cols=32 Identities=6% Similarity=0.010 Sum_probs=19.9
Q ss_pred cchHHHHHHHHHHHHHHHHhcccccCccHHHHH
Q 039787 177 IVIGQAVFNTSLNVLSNTIFSVDLVDPTAREFK 209 (278)
Q Consensus 177 vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~ 209 (278)
-++...+..+++++...++ |..++......++
T Consensus 122 ~~L~~~i~~la~~~a~kil-~~~l~~~~~~~li 153 (164)
T PRK14473 122 SELKSQIADLVTLTASRVL-GAELQARGHDALI 153 (164)
T ss_pred HHHHHHHHHHHHHHHHHHH-HhHcCHHHHHHHH
Confidence 3677777788887777664 6666444333333
No 60
>PF08780 NTase_sub_bind: Nucleotidyltransferase substrate binding protein like; InterPro: IPR010235 The member of this family from Haemophilus influenzae, HI0074, has been shown by crystal structure to resemble nucleotidyltransferase substrate binding proteins []. It forms a complex with HI0073 (P43933 from SWISSPROT), encoded by the adjacent gene, which contains a nucleotidyltransferase nucleotide binding domain (IPR002934 from INTERPRO). Double- and single-stranded DNA binding assays showed no evidence of DNA binding to HI0074 or to HI0073/HI0074 complex despite the suggestive shape of the putative binding cleft formed by the HI0074 dimer []. ; PDB: 1WWP_A 1JOG_A 1WTY_C 2YWA_B.
Probab=28.56 E-value=1.7e+02 Score=19.67 Aligned_cols=34 Identities=12% Similarity=0.367 Sum_probs=21.0
Q ss_pred ccccccCCCchHHHH---HhhhhhhccCcchhhhhHHHHH
Q 039787 121 IGMVWLPVSTPWKNL---RKICNLHIFSSHKLDANQDIRR 157 (278)
Q Consensus 121 ~~~~~~~~g~~w~~~---R~~~~~~~f~~~~l~~~~~~~~ 157 (278)
.|++ ++++.|... |...+ +.++..........+.
T Consensus 72 ~glI--~d~e~Wl~m~~~RN~ts-HtYde~~a~~i~~~I~ 108 (124)
T PF08780_consen 72 AGLI--DDGEIWLDMLEDRNLTS-HTYDEETAEEIYERIP 108 (124)
T ss_dssp TTSS--SHHHHHHHHHHHHHHGG-GTTSHHHHHHHHHTHH
T ss_pred cCCC--CCHHHHHHHHHHhcccc-CCCCHHHHHHHHHHHH
Confidence 5566 448889865 66776 7776665554444333
No 61
>PRK11677 hypothetical protein; Provisional
Probab=28.41 E-value=88 Score=21.49 Aligned_cols=10 Identities=10% Similarity=-0.247 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 039787 13 ILWLLFTWLF 22 (278)
Q Consensus 13 ~~~~~~~~~~ 22 (278)
+.++++++++
T Consensus 8 i~livG~iiG 17 (134)
T PRK11677 8 IGLVVGIIIG 17 (134)
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 62
>PRK15117 ABC transporter periplasmic binding protein MlaC; Provisional
Probab=27.51 E-value=2.7e+02 Score=20.91 Aligned_cols=64 Identities=2% Similarity=-0.005 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCCccchHHHHHHH-----HHHHHHHHHhcccc---cCccHHHHHHHHHHHHH
Q 039787 154 DIRRKKIKHLLAYVEENCR--VGQAIVIGQAVFNT-----SLNVLSNTIFSVDL---VDPTAREFKDIVWGIMT 217 (278)
Q Consensus 154 ~~~~~~~~~l~~~~~~~~~--~~~~vd~~~~~~~~-----~~~vi~~~~fG~~~---~~~~~~~~~~~~~~~~~ 217 (278)
..+.+.++++++.+.+... .+.+--+...+... =++.+++.++|... +.+..++|.+.+.+.+.
T Consensus 29 ~~V~~~~~~vl~~l~~~~~~~~~~~~~~~~~v~~~l~p~~Df~~~s~~vLG~~wr~as~eQr~~F~~~F~~~Lv 102 (211)
T PRK15117 29 KLMDEAAQKTFDRLKNEQPKIRANPDYLRTIVDQELLPYVQVKYAGALVLGRYYKDATPAQREAYFAAFREYLK 102 (211)
T ss_pred HHHHHHHHHHHHHHHhCHHhhccCHHHHHHHHHHHccccCCHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHH
Confidence 3567777777777753211 12223333333333 37788899999987 34445667777766554
No 63
>PRK14471 F0F1 ATP synthase subunit B; Provisional
Probab=27.18 E-value=1.1e+02 Score=21.72 Aligned_cols=23 Identities=22% Similarity=0.284 Sum_probs=15.3
Q ss_pred chHHHHHHHHHHHHHHHHhccccc
Q 039787 178 VIGQAVFNTSLNVLSNTIFSVDLV 201 (278)
Q Consensus 178 d~~~~~~~~~~~vi~~~~fG~~~~ 201 (278)
++...+..++.++...++ |..++
T Consensus 123 ~l~~~i~~la~~~a~kil-~~~l~ 145 (164)
T PRK14471 123 EIKNQVANLSVEIAEKVL-RKELS 145 (164)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHcC
Confidence 566677777777776664 66653
No 64
>PF08539 HbrB: HbrB-like; InterPro: IPR013745 HbrB is involved in hyphal growth and polarity [].
Probab=25.38 E-value=2.5e+02 Score=19.94 Aligned_cols=33 Identities=12% Similarity=0.273 Sum_probs=23.9
Q ss_pred CchHHHHHhhhhhhccCcchhhhhHHHHHHHHHH
Q 039787 129 STPWKNLRKICNLHIFSSHKLDANQDIRRKKIKH 162 (278)
Q Consensus 129 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~ 162 (278)
++.|......+. +.|..+.++.-..-+.+.+..
T Consensus 6 ~~~W~~~~~~vl-~lF~g~~l~~~iEdlN~lv~~ 38 (158)
T PF08539_consen 6 DDAWNSLCAKVL-PLFQGERLRLPIEDLNELVRF 38 (158)
T ss_pred hhhHHHHHHHHH-HHHcCCCCCcCHHHHHHHHHH
Confidence 789999999998 999999988333333333333
No 65
>PRK13460 F0F1 ATP synthase subunit B; Provisional
Probab=25.36 E-value=1.2e+02 Score=21.80 Aligned_cols=24 Identities=8% Similarity=0.234 Sum_probs=14.9
Q ss_pred cchHHHHHHHHHHHHHHHHhccccc
Q 039787 177 IVIGQAVFNTSLNVLSNTIFSVDLV 201 (278)
Q Consensus 177 vd~~~~~~~~~~~vi~~~~fG~~~~ 201 (278)
-++...+..++.++...++ +..++
T Consensus 130 ~el~~ei~~lA~~~a~kil-~~~l~ 153 (173)
T PRK13460 130 SQLQNQIVEMTITIASKVL-EKQLK 153 (173)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHCC
Confidence 3566677777777766664 44443
No 66
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=23.46 E-value=30 Score=22.31 Aligned_cols=50 Identities=20% Similarity=0.301 Sum_probs=26.2
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEE
Q 039787 26 LSSFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTL 77 (278)
Q Consensus 26 ~~~~~~~~~~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~ 77 (278)
..+.+-+..++..-.+||--.+.++|-+..+ .+...+-+-+..||.||-+
T Consensus 21 l~WlWLR~gks~~~~l~g~~sL~lf~~llT~--~~~~a~GRvYAAYGGvyI~ 70 (109)
T COG1742 21 LVWLWLRLGKSALWLLPGALSLALFGWLLTL--QPAAAFGRVYAAYGGVYIA 70 (109)
T ss_pred HHHHHHHcCCchHhHHHHHHHHHHHHHHHHc--CCchhhhhHHHHhcchHHH
Confidence 3344433333333344554445566666544 3444566667778887643
No 67
>PF10653 Phage-A118_gp45: Protein gp45 of Bacteriophage A118; InterPro: IPR018915 The proteins in this entry represents Gp45 in Listeria phage A118 (Bacteriophage A118) and related proteins; Gp45 is thought to have a function in the phage tail-fibre system.
Probab=22.05 E-value=1.2e+02 Score=16.48 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=19.1
Q ss_pred HHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHH
Q 039787 135 LRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEE 169 (278)
Q Consensus 135 ~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~ 169 (278)
.-|++++|+|..+ .|.+..-|+.+.+.+.+
T Consensus 22 rtkmianpaf~qk-----iplietgcekm~dyiee 51 (62)
T PF10653_consen 22 RTKMIANPAFQQK-----IPLIETGCEKMTDYIEE 51 (62)
T ss_pred hHHHhcCHHHHhc-----cchhhhhhHHHHHHHHH
Confidence 4566666888544 36666667777666654
No 68
>PF14840 DNA_pol3_delt_C: Processivity clamp loader gamma complex DNA pol III C-term; PDB: 3GLG_F 1XXH_A 3GLF_F 1JQJ_C 3GLI_F.
Probab=21.82 E-value=2.2e+02 Score=19.21 Aligned_cols=56 Identities=11% Similarity=0.072 Sum_probs=29.2
Q ss_pred chHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHH
Q 039787 130 TPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVL 191 (278)
Q Consensus 130 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi 191 (278)
..|..++.++. .+.+ .....-.+.+-..+..++...++...-|+...+..+++...
T Consensus 64 rIW~~Rq~l~~-~Al~-----Rls~~~L~~ll~~~a~iD~~iKg~~~~~~W~~L~~L~L~lc 119 (125)
T PF14840_consen 64 RIWQKRQPLYQ-QALQ-----RLSLQQLEQLLQLLAQIDRAIKGNYQGDPWDELEQLSLLLC 119 (125)
T ss_dssp TT-CCHHHHHH-HHHH-----HS-HHHHHHHHHHHHHHHHHHHTSTTSTHHHHHHHHHHHTT
T ss_pred CCCHhHHHHHH-HHHH-----cCCHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHc
Confidence 45766777776 5533 22233333344444444433334456688888887776543
No 69
>PF13120 DUF3974: Domain of unknown function (DUF3974)
Probab=21.11 E-value=1.3e+02 Score=18.89 Aligned_cols=10 Identities=40% Similarity=0.783 Sum_probs=4.2
Q ss_pred CchHHHHHHH
Q 039787 59 KPHKSLAKLA 68 (278)
Q Consensus 59 ~~~~~~~~~~ 68 (278)
..++.++++.
T Consensus 42 rahesiekls 51 (126)
T PF13120_consen 42 RAHESIEKLS 51 (126)
T ss_pred HHHhHHHHhc
Confidence 3344444443
No 70
>COG4052 Uncharacterized protein related to methyl coenzyme M reductase subunit C [General function prediction only]
Probab=20.90 E-value=1.6e+02 Score=22.40 Aligned_cols=25 Identities=20% Similarity=0.324 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCC
Q 039787 245 IHYSKIFEVFDRLIDQRLDQRQEHG 269 (278)
Q Consensus 245 ~~~~~~~~~~~~~i~~~~~~~~~~~ 269 (278)
++.+++.+.+.++|++|++++..++
T Consensus 199 ~aL~klvevvs~ii~errrela~DP 223 (310)
T COG4052 199 RALDKLVEVVSKIISERRRELAKDP 223 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCC
Confidence 5778889999999999998877654
No 71
>PF09902 DUF2129: Uncharacterized protein conserved in bacteria (DUF2129); InterPro: IPR016979 This is a group of uncharacterised conserved proteins.
Probab=20.46 E-value=2.1e+02 Score=17.15 Aligned_cols=31 Identities=13% Similarity=0.130 Sum_probs=23.1
Q ss_pred HHhCCceEEeccCeeEEEecCHHHHHHHHHh
Q 039787 69 KIHGPIMTLKFGQVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 69 ~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~ 99 (278)
++||+|..+.--.+-.++-.|-+.+.++..+
T Consensus 18 ~kfG~i~Y~Skk~kYvvlYvn~~~~e~~~~k 48 (71)
T PF09902_consen 18 RKFGDIHYVSKKMKYVVLYVNEEDVEEIIEK 48 (71)
T ss_pred hhcccEEEEECCccEEEEEECHHHHHHHHHH
Confidence 6799998886545566777788888888743
No 72
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=20.25 E-value=2.3e+02 Score=17.53 Aligned_cols=36 Identities=11% Similarity=0.167 Sum_probs=25.3
Q ss_pred HHHHHHHHhCCc---eEEeccCeeEEEec-----CHHHHHHHHH
Q 039787 63 SLAKLAKIHGPI---MTLKFGQVTTVVVS-----SASMAKAILQ 98 (278)
Q Consensus 63 ~~~~~~~~yG~i---~~~~~~~~~~v~i~-----dp~~~~~i~~ 98 (278)
.-++++.+|.++ +++..++.+.+-|. |.+.+.+++.
T Consensus 25 L~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLq 68 (81)
T PRK10597 25 LSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQ 68 (81)
T ss_pred HHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHH
Confidence 446778888876 89988877777764 3466666664
No 73
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=20.01 E-value=3.5e+02 Score=21.91 Aligned_cols=49 Identities=18% Similarity=0.129 Sum_probs=34.4
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
++||+.. ..-...+.++..+||+|.++.+. |.-.|...+++.+...+..
T Consensus 273 fV~NL~~--~~~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~ 330 (352)
T TIGR01661 273 FVYNLSP--DTDETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILS 330 (352)
T ss_pred EEeCCCC--CCCHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 4556543 34556678888999999888753 2347888899888887753
Done!