Query 039787
Match_columns 278
No_of_seqs 223 out of 1609
Neff 11.6
Searched_HMMs 29240
Date Mon Mar 25 22:57:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039787.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039787hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 100.0 1.3E-31 4.4E-36 223.8 22.8 226 36-265 5-236 (494)
2 3pm0_A Cypib1, cytochrome P450 100.0 1.2E-31 4.1E-36 224.7 20.3 229 36-266 6-244 (507)
3 2hi4_A Cytochrome P450 1A2; CY 100.0 1.3E-30 4.5E-35 217.7 22.0 228 34-264 11-250 (495)
4 3qz1_A Steroid 21-hydroxylase; 100.0 1E-31 3.4E-36 224.7 13.8 225 30-265 20-247 (496)
5 3s79_A Cytochrome P450 19A1; o 100.0 6.7E-30 2.3E-34 214.0 17.5 220 37-267 43-268 (503)
6 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.7E-29 5.8E-34 210.5 19.7 226 33-265 18-261 (482)
7 3e6i_A CYPIIE1, P450-J, cytoch 100.0 3.5E-29 1.2E-33 208.2 21.1 222 36-265 7-236 (476)
8 3czh_A Cytochrome P450 2R1; vi 100.0 3.4E-29 1.2E-33 208.4 19.1 223 37-264 10-241 (481)
9 3gw9_A Sterol 14alpha-demethyl 100.0 1.1E-29 3.8E-34 209.8 15.7 219 38-265 2-224 (450)
10 1r9o_A Cytochrome P450 2C9; mo 100.0 8.3E-29 2.9E-33 206.0 19.2 220 38-264 10-237 (477)
11 2fdv_A Cytochrome P450 2A6; CY 100.0 7.9E-29 2.7E-33 206.0 18.7 220 38-264 9-236 (476)
12 3nxu_A Cytochrome P450 3A4; al 100.0 4.3E-30 1.5E-34 214.2 11.1 158 38-200 13-171 (485)
13 1po5_A Cytochrome P450 2B4; ox 100.0 9.1E-29 3.1E-33 205.7 18.8 219 38-264 9-236 (476)
14 3tbg_A Cytochrome P450 2D6; mo 100.0 5.4E-28 1.8E-32 201.3 21.2 224 37-265 8-240 (479)
15 3ld6_A Lanosterol 14-alpha dem 100.0 7.4E-29 2.5E-33 205.4 11.2 218 37-265 9-227 (461)
16 2ij2_A Cytochrome P450 BM3; mo 100.0 5.1E-27 1.7E-31 194.8 21.1 218 39-264 3-226 (470)
17 3n9y_A Cholesterol SIDE-chain 99.9 1.6E-26 5.5E-31 192.8 19.6 224 34-265 4-248 (487)
18 3i3k_A Lanosterol 14-alpha dem 99.9 1.8E-27 6.1E-32 197.2 11.0 219 35-265 7-227 (461)
19 2ve3_A Putative cytochrome P45 99.9 1.7E-26 5.8E-31 190.3 16.4 210 35-264 8-217 (444)
20 2cib_A Cytochrome P450 51; hem 99.9 2.2E-26 7.4E-31 190.3 14.7 212 39-265 4-216 (455)
21 3dbg_A Putative cytochrome P45 99.9 6.2E-27 2.1E-31 194.2 10.5 212 38-264 22-237 (467)
22 3mdm_A Cholesterol 24-hydroxyl 99.9 2.1E-23 7.3E-28 172.5 22.3 204 57-267 9-219 (456)
23 3v8d_A Cholesterol 7-alpha-mon 99.9 2.6E-25 8.9E-30 185.6 6.4 216 36-262 10-233 (491)
24 2cd8_A Cytochrome P450 monooxy 99.9 1.1E-23 3.8E-28 172.8 15.5 198 38-264 25-228 (436)
25 1izo_A P450bsbeta, cytochrome 99.9 9.3E-23 3.2E-27 166.7 18.4 194 47-264 8-204 (417)
26 1n97_A CYP175A1; electron tran 99.9 1.2E-24 4.1E-29 176.2 7.1 198 43-261 3-201 (389)
27 3awm_A Fatty acid alpha-hydrox 99.9 1.7E-22 5.8E-27 165.0 17.7 197 41-264 4-203 (415)
28 1jfb_A Nitric-oxide reductase 99.9 1.6E-21 5.3E-26 158.8 20.3 199 40-264 2-206 (404)
29 1ued_A P450 OXYC, P450 monooxy 99.9 2.6E-21 8.9E-26 157.4 17.0 193 38-264 9-213 (406)
30 2zbx_A Cytochrome P450-SU1; be 99.9 3.3E-20 1.1E-24 151.2 20.7 196 39-264 5-210 (412)
31 1cpt_A Cytochrome P450-TERP; o 99.9 3.6E-21 1.2E-25 157.7 13.2 210 37-264 4-233 (428)
32 3dax_A Cytochrome P450 7A1; ch 99.8 2.1E-21 7.3E-26 162.0 9.6 159 38-201 12-176 (491)
33 3dsk_A Cytochrome P450 74A, ch 99.8 1.5E-20 5.2E-25 157.0 11.2 162 36-200 25-203 (495)
34 3oo3_A OXY protein; cytochrome 99.8 2.1E-19 7.2E-24 145.3 17.6 180 57-264 11-194 (384)
35 3b6h_A Prostacyclin synthase; 99.8 3.5E-20 1.2E-24 154.9 12.2 159 36-201 15-176 (498)
36 2jjn_A Cytochrome P450 113A1; 99.8 8E-20 2.8E-24 148.9 13.5 194 33-264 13-207 (411)
37 2zwu_A Camphor 5-monooxygenase 99.8 1.9E-19 6.5E-24 146.7 15.3 197 35-264 7-215 (415)
38 3ivy_A Cytochrome P450 CYP125; 99.8 4.4E-20 1.5E-24 151.4 11.4 201 39-265 18-235 (433)
39 1s1f_A Putative cytochrome P45 99.8 1.3E-19 4.6E-24 147.4 13.8 193 39-263 8-208 (406)
40 3abb_A CYP105D6, cytochrome P4 99.8 3.2E-19 1.1E-23 145.2 15.7 181 54-264 20-209 (408)
41 3aba_A Cytochrome P450; oxidor 99.8 1.1E-18 3.6E-23 142.0 18.5 180 56-264 17-203 (403)
42 2wm5_A CYP124, putative cytoch 99.8 7.2E-19 2.5E-23 144.2 16.8 186 58-264 44-240 (435)
43 3dan_A Cytochrome P450 74A2; A 99.8 8.9E-20 3.1E-24 151.5 11.3 163 36-201 6-186 (473)
44 3tyw_A Putative cytochrome P45 99.8 1.2E-18 4.2E-23 142.2 17.7 180 56-264 27-215 (417)
45 3ejb_B Biotin biosynthesis cyt 99.8 4E-18 1.4E-22 138.7 19.6 185 57-264 12-201 (404)
46 3tkt_A Cytochrome P450; aromat 99.8 1.4E-18 4.7E-23 143.2 16.9 192 60-265 47-256 (450)
47 1odo_A Putative cytochrome P45 99.8 1.3E-18 4.4E-23 141.7 15.6 183 55-264 12-205 (408)
48 1z8o_A 6-deoxyerythronolide B 99.8 2.3E-18 7.8E-23 140.1 17.0 180 56-264 12-206 (404)
49 2y5n_A MYCG, P-450-like protei 99.8 1.7E-18 5.7E-23 141.2 15.7 181 56-264 35-220 (417)
50 2xbk_A PIMD protein; epoxidati 99.8 6.5E-18 2.2E-22 137.1 19.0 178 56-264 24-212 (404)
51 3a4g_A Vitamin D hydroxylase; 99.8 3.4E-18 1.2E-22 139.2 16.4 178 56-264 18-201 (411)
52 2xkr_A CYP142, putative cytoch 99.8 5.2E-18 1.8E-22 137.7 17.0 179 57-264 17-196 (398)
53 4fb2_A P450CIN; heme, monooxyg 99.8 1.7E-18 5.7E-23 140.6 13.8 179 56-264 17-198 (398)
54 3b98_A Prostaglandin I2 syntha 99.8 3E-19 1E-23 148.4 8.8 155 37-199 16-174 (475)
55 1q5d_A P450 epoxidase; cytochr 99.8 3.4E-18 1.2E-22 139.7 14.6 186 56-264 24-219 (419)
56 2z36_A MOXA, cytochrome P450 t 99.8 1.2E-17 3.9E-22 136.2 16.0 192 40-264 8-211 (413)
57 2z3t_A Cytochrome P450; monoxy 99.8 1.3E-17 4.5E-22 136.3 16.3 185 57-264 19-220 (425)
58 3r9b_A Cytochrome P450 164A2; 99.8 9.9E-18 3.4E-22 137.0 15.5 186 57-264 28-222 (418)
59 1gwi_A CYP154C1, cytochrome P4 99.8 1.3E-17 4.6E-22 135.8 15.8 181 55-264 14-208 (411)
60 2dkk_A Cytochrome P450; CYP158 99.8 7.3E-18 2.5E-22 137.2 14.2 179 57-264 26-212 (411)
61 3lxh_A Cytochrome P450; heme, 99.8 1.2E-17 4.3E-22 136.4 15.6 184 57-264 37-222 (421)
62 2uuq_A CYP130, cytochrome P450 99.8 1.2E-17 4.2E-22 136.1 15.1 179 57-264 24-214 (414)
63 3buj_A CALO2; heme, iron, meta 99.8 4E-17 1.4E-21 132.4 16.9 180 58-264 13-200 (397)
64 1lfk_A OXYB, P450 monooxygenas 99.7 2.2E-17 7.5E-22 134.0 13.6 175 61-264 16-204 (398)
65 3mgx_A Putative P450 monooxyge 99.7 1E-17 3.5E-22 136.5 10.8 182 57-264 36-224 (415)
66 3nc3_A Cytochrome P450 CYPX; c 99.7 1.3E-17 4.4E-22 137.0 10.9 183 57-264 52-235 (441)
67 3oft_A Cytochrome P450, CYP101 99.7 4.7E-17 1.6E-21 132.0 11.1 178 56-264 22-200 (396)
68 3rwl_A Cytochrome P450 alkane 99.7 1.6E-15 5.3E-20 124.1 16.3 182 57-262 37-229 (426)
69 3b4x_A 367AA long hypothetical 99.7 4.3E-16 1.5E-20 125.0 12.3 169 61-264 2-181 (367)
70 2wiy_A XPLA-heme, cytochrome P 99.7 2.5E-15 8.5E-20 121.7 15.9 181 58-264 20-200 (394)
71 1n40_A P450 MT2, cytochrome P4 99.7 7.7E-16 2.6E-20 124.8 11.6 145 56-215 14-167 (396)
72 3p3o_A Cytochrome P450; monoox 99.6 1.9E-15 6.6E-20 123.2 10.3 181 57-264 32-220 (416)
73 1io7_A Cytochrome P450 CYP119; 99.6 4.1E-15 1.4E-19 119.4 11.9 128 60-201 1-139 (368)
74 2rfb_A Cytochrome P450; heme, 99.6 5.2E-15 1.8E-19 117.6 9.7 127 69-216 2-129 (343)
75 4dxy_A Cytochrome P450, CYP101 99.4 4.5E-12 1.5E-16 103.2 15.8 184 58-265 37-222 (417)
76 4dnj_A Putative cytochrome P45 99.4 3.5E-12 1.2E-16 103.8 10.5 146 45-199 18-170 (412)
77 2yjn_B Erycii, DTDP-4-keto-6-d 98.5 5.6E-10 1.9E-14 89.3 -8.3 130 40-201 35-180 (381)
78 2diu_A KIAA0430 protein; struc 76.4 6.6 0.00023 24.1 4.9 60 48-108 12-75 (96)
79 1s79_A Lupus LA protein; RRM, 75.8 12 0.0004 23.2 7.2 51 47-99 13-71 (103)
80 3lqv_A PRE-mRNA branch site pr 74.4 13 0.00046 23.2 7.8 57 40-98 3-65 (115)
81 3d2w_A TAR DNA-binding protein 72.9 12 0.00043 22.2 5.9 53 42-96 8-64 (89)
82 1iqt_A AUF1, heterogeneous nuc 67.7 14 0.00048 20.8 5.7 42 59-100 11-61 (75)
83 2krb_A Eukaryotic translation 66.2 16 0.00056 21.0 7.6 51 49-99 5-66 (81)
84 2knc_A Integrin alpha-IIB; tra 61.7 17 0.00057 19.6 4.1 14 23-36 27-40 (54)
85 2mss_A Protein (musashi1); RNA 60.2 21 0.00071 20.1 6.2 48 50-99 4-60 (75)
86 2nlw_A Eukaryotic translation 51.8 39 0.0013 20.7 7.3 53 47-99 17-80 (105)
87 1x4e_A RNA binding motif, sing 47.8 38 0.0013 19.5 5.1 51 46-98 6-65 (85)
88 3beg_B Splicing factor, argini 45.9 53 0.0018 20.5 7.6 58 47-106 18-78 (115)
89 1sjq_A Polypyrimidine tract-bi 44.9 54 0.0019 20.4 6.7 54 43-98 14-70 (105)
90 3s8s_A Histone-lysine N-methyl 44.0 56 0.0019 20.3 6.0 51 47-99 8-67 (110)
91 2l8s_A Integrin alpha-1; trans 43.0 25 0.00087 18.8 2.7 13 24-36 25-37 (54)
92 1x4c_A Splicing factor, argini 42.9 56 0.0019 20.0 7.3 50 48-99 18-69 (108)
93 2cqc_A Arginine/serine-rich sp 41.7 53 0.0018 19.3 6.7 55 43-99 13-76 (95)
94 2a3j_A U1 small nuclear ribonu 41.1 70 0.0024 20.6 6.4 53 47-99 31-91 (127)
95 2jwn_A Embryonic polyadenylate 41.1 65 0.0022 20.2 5.3 47 49-97 40-95 (124)
96 2pe8_A Splicing factor 45; RRM 40.3 64 0.0022 19.9 5.2 64 42-105 5-82 (105)
97 3s7r_A Heterogeneous nuclear r 39.9 54 0.0018 18.9 5.0 51 47-99 13-72 (87)
98 4f25_A Polyadenylate-binding p 39.6 67 0.0023 20.0 6.0 50 48-99 8-64 (115)
99 4fxv_A ELAV-like protein 1; RN 38.8 64 0.0022 19.5 6.2 50 48-99 22-80 (99)
100 1p27_B RNA-binding protein 8A; 37.8 67 0.0023 19.4 7.0 50 48-99 26-84 (106)
101 2dnz_A Probable RNA-binding pr 37.0 64 0.0022 19.0 7.8 58 47-106 7-74 (95)
102 2ad9_A Polypyrimidine tract-bi 36.9 81 0.0028 20.1 6.6 51 46-98 32-85 (119)
103 1rk8_A CG8781-PA, CG8781-PA pr 36.6 95 0.0033 20.8 6.7 50 48-99 75-133 (165)
104 3ex7_B RNA-binding protein 8A; 36.4 80 0.0027 19.9 6.6 57 48-106 25-91 (126)
105 1x4d_A Matrin 3; structural ge 36.3 75 0.0025 19.5 5.7 56 42-98 12-70 (102)
106 1whx_A Hypothetical protein ri 36.0 77 0.0026 19.6 6.7 57 49-107 14-74 (111)
107 2jvr_A Nucleolar protein 3; RN 35.8 80 0.0027 19.7 6.1 51 47-99 30-86 (111)
108 4f02_A Polyadenylate-binding p 35.7 1E+02 0.0034 21.7 6.0 55 43-99 13-76 (213)
109 2voo_A Lupus LA protein; RNA-b 35.6 78 0.0027 22.1 5.2 49 49-99 113-169 (193)
110 2d9o_A DNAJ (HSP40) homolog, s 34.8 78 0.0027 19.3 5.6 40 60-99 30-73 (100)
111 2kxn_B Transformer-2 protein h 34.8 90 0.0031 20.0 9.1 54 44-99 45-107 (129)
112 2err_A Ataxin-2-binding protei 34.6 80 0.0027 19.4 4.9 50 48-99 32-88 (109)
113 3s6e_A RNA-binding protein 39; 33.9 57 0.0019 20.6 3.9 65 41-105 3-81 (114)
114 1oo0_B CG8781-PA, drosophila Y 33.9 81 0.0028 19.2 6.9 50 48-99 29-87 (110)
115 2wbr_A GW182, gawky, LD47780P; 33.7 79 0.0027 19.0 6.8 50 47-98 9-61 (89)
116 2kvi_A Nuclear polyadenylated 32.8 79 0.0027 18.7 7.3 56 48-104 13-70 (96)
117 2la6_A RNA-binding protein FUS 32.7 80 0.0027 18.8 7.4 51 46-98 14-81 (99)
118 1uaw_A Mouse-musashi-1; RNP-ty 32.4 67 0.0023 17.8 5.2 49 50-100 5-62 (77)
119 2cq4_A RNA binding motif prote 32.2 90 0.0031 19.2 5.4 48 49-98 29-85 (114)
120 1wf0_A TDP-43, TAR DNA-binding 32.0 64 0.0022 18.7 3.8 47 48-96 8-58 (88)
121 3bs9_A Nucleolysin TIA-1 isofo 31.9 75 0.0026 18.2 5.5 50 48-99 9-67 (87)
122 2cq1_A PTB-like protein L; RRM 31.8 89 0.003 19.0 6.2 51 46-98 16-69 (101)
123 2dnr_A Synaptojanin-1; RRM dom 31.6 63 0.0022 19.6 3.5 38 62-99 30-68 (91)
124 2d9p_A Polyadenylate-binding p 31.6 86 0.0029 18.8 7.1 56 42-99 12-74 (103)
125 2bz2_A Negative elongation fac 31.4 1E+02 0.0034 19.5 5.9 48 48-99 42-92 (121)
126 2dgu_A Heterogeneous nuclear r 31.4 87 0.003 18.8 6.8 51 47-99 13-64 (103)
127 1x4b_A Heterogeneous nuclear r 31.3 77 0.0026 19.6 4.3 49 49-99 31-88 (116)
128 2cjk_A Nuclear polyadenylated 31.3 1.1E+02 0.0039 20.1 6.0 50 49-100 91-149 (167)
129 2fy1_A RNA-binding motif prote 31.2 97 0.0033 19.3 5.9 56 48-105 10-74 (116)
130 1sjr_A Polypyrimidine tract-bi 31.0 1.3E+02 0.0043 20.6 6.8 49 49-99 50-103 (164)
131 2hvz_A Splicing factor, argini 30.9 87 0.003 18.7 6.2 47 50-98 5-55 (101)
132 1whw_A Hypothetical protein ri 30.9 86 0.0029 18.6 6.8 50 48-99 11-69 (99)
133 2cpi_A CCR4-NOT transcription 30.7 73 0.0025 19.6 4.0 51 47-99 17-82 (111)
134 2dgv_A HnRNP M, heterogeneous 30.3 84 0.0029 18.3 7.3 50 48-99 11-67 (92)
135 2dnh_A Bruno-like 5, RNA bindi 29.7 94 0.0032 18.7 6.0 50 47-98 17-74 (105)
136 2e5h_A Zinc finger CCHC-type a 29.4 88 0.003 18.3 6.8 52 46-99 17-77 (94)
137 2jrs_A RNA-binding protein 39; 29.4 1E+02 0.0034 18.9 7.2 49 48-98 29-86 (108)
138 3zzy_A Polypyrimidine tract-bi 29.1 1.2E+02 0.0041 19.7 5.7 48 49-98 32-84 (130)
139 1x4g_A Nucleolysin TIAR; struc 29.1 1E+02 0.0034 18.8 6.8 51 47-99 27-80 (109)
140 1x5p_A Negative elongation fac 29.0 94 0.0032 18.4 6.9 49 47-99 17-68 (97)
141 2ywk_A Putative RNA-binding pr 28.3 93 0.0032 18.2 5.9 49 48-98 19-75 (95)
142 1b35_D CRPV, protein (cricket 28.2 39 0.0013 17.5 1.8 28 45-72 29-56 (57)
143 1x4f_A Matrin 3; structural ge 28.0 1.2E+02 0.0039 19.1 5.0 54 44-98 24-80 (112)
144 2khc_A Testis-specific RNP-typ 27.9 1.1E+02 0.0038 18.9 4.7 49 49-99 44-101 (118)
145 1p1t_A Cleavage stimulation fa 27.8 1E+02 0.0035 18.4 6.3 50 48-99 11-69 (104)
146 2do4_A Squamous cell carcinoma 27.7 1E+02 0.0034 18.3 7.3 52 46-99 18-77 (100)
147 2x1f_A MRNA 3'-END-processing 27.7 98 0.0034 18.2 6.7 49 49-99 6-63 (96)
148 2cqi_A Nucleolysin TIAR; RNA r 27.4 1E+02 0.0035 18.4 6.8 50 47-98 17-73 (103)
149 2div_A TRNA selenocysteine ass 27.4 1E+02 0.0034 18.3 5.9 52 46-99 10-71 (99)
150 3v4m_A Splicing factor U2AF 65 27.3 1.1E+02 0.0038 18.7 5.8 45 62-106 30-86 (105)
151 3md3_A Nuclear and cytoplasmic 27.3 1.3E+02 0.0045 19.6 6.0 47 50-98 5-59 (166)
152 3pgw_S U1-70K; protein-RNA com 27.2 1.7E+02 0.0059 23.7 6.5 51 47-99 104-163 (437)
153 3ctr_A Poly(A)-specific ribonu 26.8 80 0.0027 19.5 3.4 41 59-99 17-58 (101)
154 2adc_A Polypyrimidine tract-bi 26.6 1.7E+02 0.006 20.8 7.5 57 48-105 37-98 (229)
155 2dnq_A RNA-binding protein 4B; 26.6 99 0.0034 17.9 6.7 50 47-98 10-60 (90)
156 1l3k_A Heterogeneous nuclear r 26.4 1.5E+02 0.0053 20.1 5.9 52 47-100 15-75 (196)
157 2qgu_A Probable signal peptide 26.3 1.8E+02 0.0061 20.8 6.3 64 154-217 33-106 (211)
158 3ucg_A Polyadenylate-binding p 26.1 99 0.0034 17.7 5.2 48 49-98 10-66 (89)
159 3mdf_A Peptidyl-prolyl CIS-tra 26.0 96 0.0033 17.6 7.1 50 47-98 9-67 (85)
160 2dgs_A DAZ-associated protein 25.5 1.1E+02 0.0038 18.1 7.7 57 47-105 12-77 (99)
161 2xnq_A Nuclear polyadenylated 25.4 1.1E+02 0.0038 18.2 7.0 51 48-99 25-76 (97)
162 3ue2_A Poly(U)-binding-splicin 25.4 1.3E+02 0.0045 19.0 5.6 64 44-107 19-99 (118)
163 1u6f_A Tcubp1, RNA-binding pro 25.3 1.4E+02 0.0047 19.1 6.3 49 49-99 46-103 (139)
164 2dgx_A KIAA0430 protein; RRM d 24.9 1.1E+02 0.0039 18.0 6.8 49 48-98 12-70 (96)
165 3md1_A Nuclear and cytoplasmic 24.9 1E+02 0.0034 17.4 5.8 48 50-99 6-62 (83)
166 2xs2_A Deleted in azoospermia- 24.6 73 0.0025 19.1 3.2 49 48-98 12-68 (102)
167 2cq3_A RNA-binding protein 9; 24.3 1.2E+02 0.0041 18.1 7.6 51 47-99 17-74 (103)
168 2dh8_A DAZ-associated protein 24.3 1.2E+02 0.0042 18.2 5.1 51 48-100 19-78 (105)
169 2dnp_A RNA-binding protein 14; 24.1 1.1E+02 0.0038 17.7 8.0 53 45-99 9-62 (90)
170 1whv_A Poly(A)-specific ribonu 23.9 1.3E+02 0.0046 18.5 5.2 41 58-98 26-67 (100)
171 3cra_A Protein MAZG; tandem-re 23.8 2.3E+02 0.0079 21.2 7.6 45 150-198 32-76 (265)
172 3ulh_A THO complex subunit 4; 23.8 1.3E+02 0.0043 18.1 6.1 50 48-99 32-89 (107)
173 2rs2_A Musashi-1, RNA-binding 23.7 1.3E+02 0.0045 18.3 5.6 51 47-99 27-86 (109)
174 3r27_A HnRNP L, heterogeneous 23.6 1.3E+02 0.0046 18.4 7.0 53 44-98 20-75 (100)
175 2dgo_A Cytotoxic granule-assoc 23.5 1.3E+02 0.0046 18.4 6.2 51 47-99 17-76 (115)
176 2jvo_A Nucleolar protein 3; nu 23.5 1.3E+02 0.0046 18.3 5.8 49 49-99 35-84 (108)
177 1nu4_A U1A RNA binding domain; 23.4 1.2E+02 0.0041 17.8 6.6 51 47-99 10-70 (97)
178 1why_A Hypothetical protein ri 23.3 1.2E+02 0.0042 17.8 7.2 52 46-99 18-72 (97)
179 3fgx_A Rbstp2171; structural g 23.1 52 0.0018 20.8 2.1 17 63-79 9-25 (114)
180 2dgt_A RNA-binding protein 30; 23.0 1.2E+02 0.0041 17.6 6.6 51 47-99 12-63 (92)
181 2cpf_A RNA binding motif prote 22.9 1.2E+02 0.0043 17.8 6.9 51 47-99 7-69 (98)
182 2cq0_A Eukaryotic translation 22.6 1E+02 0.0034 18.5 3.6 51 47-99 17-76 (103)
183 3ns6_A Eukaryotic translation 22.6 1.3E+02 0.0045 17.9 5.8 51 48-98 9-72 (100)
184 1wex_A Hypothetical protein (r 22.6 1.4E+02 0.0048 18.2 6.9 51 46-98 16-69 (104)
185 1x4h_A RNA-binding protein 28; 22.1 1.4E+02 0.0048 18.1 8.5 53 45-99 15-76 (111)
186 1wg5_A Heterogeneous nuclear r 22.1 1.4E+02 0.0047 18.0 6.8 58 47-106 17-83 (104)
187 2qfj_A FBP-interacting repress 22.0 2E+02 0.0069 19.9 7.9 49 49-99 32-89 (216)
188 3n9u_C Cleavage and polyadenyl 21.4 1.9E+02 0.0064 19.3 6.1 41 59-99 67-118 (156)
189 2dnm_A SRP46 splicing factor; 21.1 1.4E+02 0.0049 17.7 7.3 56 47-104 15-80 (103)
190 1wi8_A EIF-4B, eukaryotic tran 20.9 1.5E+02 0.005 17.8 5.7 53 43-98 13-75 (104)
191 2dhg_A TRNA selenocysteine ass 20.8 1.4E+02 0.005 17.7 8.7 56 42-99 6-70 (104)
192 2dis_A Unnamed protein product 20.7 1.5E+02 0.0051 17.9 6.7 50 48-99 11-71 (109)
193 3tyt_A Heterogeneous nuclear r 20.7 2.2E+02 0.0077 19.9 6.2 51 47-98 6-60 (205)
194 2ghp_A U4/U6 snRNA-associated 20.4 1.8E+02 0.0061 21.6 5.2 56 47-104 43-105 (292)
195 2dit_A HIV TAT specific factor 20.1 1.6E+02 0.0055 18.0 4.6 58 42-99 12-83 (112)
196 2ki2_A SS-DNA binding protein 20.1 1.4E+02 0.0047 17.2 4.9 47 50-99 6-61 (90)
197 1h2v_Z 20 kDa nuclear CAP bind 20.1 1.9E+02 0.0067 18.9 6.2 51 47-99 41-100 (156)
198 3ezq_A Tumor necrosis factor r 20.0 1.8E+02 0.0061 18.5 4.6 38 132-169 20-61 (115)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=1.3e-31 Score=223.85 Aligned_cols=226 Identities=22% Similarity=0.335 Sum_probs=176.6
Q ss_pred CCCCCCCCCCCCCeeeccccCC--CCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhh
Q 039787 36 GSEQQPPGPTPYPVIGNLLELG--DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA 113 (278)
Q Consensus 36 ~~~~~~pgp~~~p~~g~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~ 113 (278)
+..+.||||+++|++||++.+. +.++..+.+|+++|||||++++|+.+.|+++||+++++++.++...|.+++.....
T Consensus 5 ~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~ 84 (494)
T 3swz_A 5 TGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATL 84 (494)
T ss_dssp -------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHH
T ss_pred CCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence 3467899999999999999883 35788999999999999999999999999999999999999888899988876655
Q ss_pred hhcccCcccccccCCCchHHHHHhhhhhhccCc--chhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHH
Q 039787 114 CSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSS--HKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVL 191 (278)
Q Consensus 114 ~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~--~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi 191 (278)
..+...+.|++++++|+.|+.+|++++ ++|+. ..+..+.+.+.++++.+++.+.+ ..+.++|+.+.+..+++|+|
T Consensus 85 ~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~t~dvi 161 (494)
T 3swz_A 85 DIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLAT--HNGQSIDISFPVFVAVTNVI 161 (494)
T ss_dssp HHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHH--TTTEEECCHHHHHHHHHHHH
T ss_pred HHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHH--cCCCcccHHHHHHHHHHHHH
Confidence 555444678888877999999999999 98874 55778899999999999999974 25678999999999999999
Q ss_pred HHHHhcccccC--ccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 192 SNTIFSVDLVD--PTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 192 ~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
+.++||.++.. +....+......+........+.+++||++++| ....++..+..+.+.++++++++++++..
T Consensus 162 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 236 (494)
T 3swz_A 162 SLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFP-NKTLEKLKSHVKIRNDLLNKILENYKEKF 236 (494)
T ss_dssp HHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSC-CSHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999832 222333333444444444445777889988873 34456677788888889999998877543
No 2
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=224.75 Aligned_cols=229 Identities=19% Similarity=0.265 Sum_probs=164.4
Q ss_pred CCCCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhh
Q 039787 36 GSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACS 115 (278)
Q Consensus 36 ~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~ 115 (278)
++.+.||||+++|++|+++.+..+++..+.+|+++||+||++++|+.+.|+++||+++++|+.++...|.+++.......
T Consensus 6 ~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~ 85 (507)
T 3pm0_A 6 SSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRV 85 (507)
T ss_dssp ----------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHHH
T ss_pred CCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHHh
Confidence 34568999999999999999888899999999999999999999999999999999999999887788887776554433
Q ss_pred cccCcccccccCCCchHHHHHhhhhhhccCcchh------hhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHH
Q 039787 116 YNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKL------DANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLN 189 (278)
Q Consensus 116 ~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l------~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~ 189 (278)
.. .|.|++++.+|+.|+++|++++ +.|+.... +.+.+.+.++++++++.+.+...++.++|+.+.+..+++|
T Consensus 86 ~~-~g~~l~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d 163 (507)
T 3pm0_A 86 VS-GGRSMAFGHYSEHWKVQRRAAH-SMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVAN 163 (507)
T ss_dssp GG-GGTCSSSSCSSHHHHHHHHHHH-HHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHHHH
T ss_pred hc-CCCceEECCCChHHHHHHHHHH-HHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHHHH
Confidence 33 3677877767999999999998 87654333 3388999999999999997655567789999999999999
Q ss_pred HHHHHHhcccccC--ccHHHHHHHHHHHHHHhCCCccccccccccccchh--hHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 190 VLSNTIFSVDLVD--PTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQ--GIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 190 vi~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
+++.++||.++.. +...++.+.+.++........+...+||+.++|.. ...++..++.+.+.+++.++|+++++..
T Consensus 164 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 243 (507)
T 3pm0_A 164 VMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESL 243 (507)
T ss_dssp HHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999832 23344555555666655544566778888887321 2456777888899999999999888754
Q ss_pred h
Q 039787 266 Q 266 (278)
Q Consensus 266 ~ 266 (278)
.
T Consensus 244 ~ 244 (507)
T 3pm0_A 244 R 244 (507)
T ss_dssp C
T ss_pred c
Confidence 3
No 3
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=217.72 Aligned_cols=228 Identities=15% Similarity=0.267 Sum_probs=175.5
Q ss_pred cCCCCCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhh
Q 039787 34 KAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA 113 (278)
Q Consensus 34 ~~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~ 113 (278)
..++.+.+|||+++|++|+++.+.++++..+.+++++||||+++++|+.+.++++||+++++|+.++...|.+++.....
T Consensus 11 ~~~~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~ 90 (495)
T 2hi4_A 11 VPKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTS 90 (495)
T ss_dssp CCTTCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHH
T ss_pred CCCCCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHH
Confidence 33344556999999999999888778889999999999999999999999999999999999998766678776654433
Q ss_pred hhcccCccccccc-CCCchHHHHHhhhhhhccC---cchh---h---hhHHHHHHHHHHHHHHHHHhccCCCccchHHHH
Q 039787 114 CSYNHQEIGMVWL-PVSTPWKNLRKICNLHIFS---SHKL---D---ANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV 183 (278)
Q Consensus 114 ~~~~~~g~~~~~~-~~g~~w~~~R~~~~~~~f~---~~~l---~---~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~ 183 (278)
.... .+.|++++ ++|+.|+++|++++ ++|+ ..++ + .+.+.+.++++++++.|.+...+++++|+.+.+
T Consensus 91 ~~~~-~~~~l~~~~~~g~~w~~~Rr~~~-~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~ 168 (495)
T 2hi4_A 91 TLIT-DGQSLTFSTDSGPVWAARRRLAQ-NALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQV 168 (495)
T ss_dssp HTST-TSCCTTTSSCCSHHHHHHHHHHH-HHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHH
T ss_pred HHhc-CCCCEEEcCCCChHHHHHHHHHH-HHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHH
Confidence 3222 35777777 45999999999999 8754 3333 2 688999999999999997544466789999999
Q ss_pred HHHHHHHHHHHHhcccccC--ccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 039787 184 FNTSLNVLSNTIFSVDLVD--PTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQR 261 (278)
Q Consensus 184 ~~~~~~vi~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 261 (278)
..+++|+|+.++||.++.. ++..++.+...++........+...+|+++++| ....++..++.+.+.+++.++|+++
T Consensus 169 ~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp-~~~~~~~~~~~~~~~~~~~~~i~~r 247 (495)
T 2hi4_A 169 VVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLP-NPALQRFKAFNQRFLWFLQKTVQEH 247 (495)
T ss_dssp HHHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSC-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcC-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998732 223344444455554433333566788887763 2345667788889999999999998
Q ss_pred HHh
Q 039787 262 LDQ 264 (278)
Q Consensus 262 ~~~ 264 (278)
++.
T Consensus 248 ~~~ 250 (495)
T 2hi4_A 248 YQD 250 (495)
T ss_dssp HHT
T ss_pred HHh
Confidence 875
No 4
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.97 E-value=1e-31 Score=224.67 Aligned_cols=225 Identities=15% Similarity=0.166 Sum_probs=169.4
Q ss_pred hhhccCCCCCCCCCCCCCCeeeccccC-CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCC
Q 039787 30 YKRRKAGSEQQPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRM 108 (278)
Q Consensus 30 ~~~~~~~~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~ 108 (278)
++++..++.+.||||++ ++.+ .++++..+.+|+++||||+++++|+.+.|+++||+++++|+.++...|.+++
T Consensus 20 ~~~~~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~ 93 (496)
T 3qz1_A 20 WGRWKLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP 93 (496)
T ss_dssp ---------CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCC
T ss_pred HhhhhccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCC
Confidence 33344455789999986 3444 6788999999999999999999999999999999999999988777888777
Q ss_pred chhhhhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHH
Q 039787 109 VPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSL 188 (278)
Q Consensus 109 ~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~ 188 (278)
..........++.|++++++|+.|+++|++++ ++|+...++.+.+.+.++++++++.+.+ ..++++|+.+.+..+++
T Consensus 94 ~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~ 170 (496)
T 3qz1_A 94 QIPSYKLVSQRCQDISLGDYSLLWKAHKKLTR-SALLLGTRSSMEPWVDQLTQEFCERMRV--QAGAPVTIQKEFSLLTC 170 (496)
T ss_dssp CCTTTTTSCTTCCCSSSSCCSHHHHHHHHHHH-HHHHC--CCCHHHHHHHHHHHHHHHHHT--TCSCCCHHHHHHTHHHH
T ss_pred CcchHHHhcCCCCceEECCCCHHHHHHHHHHH-HHHhhccHhhHHHHHHHHHHHHHHHHHh--cCCCccCHHHHHHHHHH
Confidence 65544333322337887777999999999999 9999777888999999999999999974 35678999999999999
Q ss_pred HHHHHHHhcccccCccHHHHHHHHHHHHHHhCC--CccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 189 NVLSNTIFSVDLVDPTAREFKDIVWGIMTELGK--PNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 189 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
|+|+.++||. ..++....+.+.+.+.+..... ..+...+|+++++| ....++..++.+.+.+++.++|+++++..
T Consensus 171 dvi~~~~fG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 247 (496)
T 3qz1_A 171 SIICYLTFGN-KEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFP-NPGLWRLKQAIENRDHMVEKQLRRHKESM 247 (496)
T ss_dssp HHTTTTSTTC-CCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhcCC-CCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999 2223334444444444333322 13456788888873 34467788889999999999999998764
No 5
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.97 E-value=6.7e-30 Score=213.99 Aligned_cols=220 Identities=15% Similarity=0.182 Sum_probs=163.4
Q ss_pred CCCCCCCCCCCCeeeccccCC----CCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhh
Q 039787 37 SEQQPPGPTPYPVIGNLLELG----DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDA 112 (278)
Q Consensus 37 ~~~~~pgp~~~p~~g~~~~~~----~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~ 112 (278)
+.+.||||+++|++||++.+. ...+..+.+|+++||||+++++|+.+.|+++||+++++++.+ ..|.+++....
T Consensus 43 ~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~~ 120 (503)
T 3s79_A 43 GTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSKL 120 (503)
T ss_dssp --CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCHH
T ss_pred ccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhhh
Confidence 457899999999999998873 244567889999999999999999999999999999999954 35666654332
Q ss_pred h-hhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHH
Q 039787 113 A-CSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVL 191 (278)
Q Consensus 113 ~-~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi 191 (278)
. ......|.|+++..+|+.|+++|++++ ++|+...++.+.+.+.++++++++.|.+..+.++++|+.++++.+++|++
T Consensus 121 ~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi 199 (503)
T 3s79_A 121 GLQCIGMHEKGIIFNNNPELWKTTRPFFM-KALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTS 199 (503)
T ss_dssp HHHHHTCTTSSSTTCCCHHHHHHHHHHHH-HHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHH
T ss_pred hhhhhccCCCceeeCCCccHHHHHHHhhh-HhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHH
Confidence 2 222234678777777999999999999 99999999999999999999999988654456678999999999999999
Q ss_pred HHHHhcccccCccHHHHHHHHHHHHHHhCCCc-cccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 039787 192 SNTIFSVDLVDPTAREFKDIVWGIMTELGKPN-LSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQRQE 267 (278)
Q Consensus 192 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 267 (278)
+.++||.++++ .++.+.+.+.+....... ....+. .+ +...++..++.+.+.+++.++|+++++..+.
T Consensus 200 ~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 268 (503)
T 3s79_A 200 NTLFLRIPLDE---SAIVVKIQGYFDAWQALLIKPDIFF---KI--SWLYKKYEKSVKDLKDAIEVLIAEKRRRIST 268 (503)
T ss_dssp HHHHTCCCCCH---HHHHHHHHHHHHHHHHHTTCCHHHH---HS--GGGTHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCcccCc---hhHHHHHHHHHHHHHHHhcCcHHHh---hc--chhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999998742 233333333333221100 001111 11 1113556678889999999999998876543
No 6
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.97 E-value=1.7e-29 Score=210.47 Aligned_cols=226 Identities=22% Similarity=0.364 Sum_probs=172.8
Q ss_pred ccCCCCCCCCCCCCCCeeeccccC-----CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCC
Q 039787 33 RKAGSEQQPPGPTPYPVIGNLLEL-----GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNR 107 (278)
Q Consensus 33 ~~~~~~~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~ 107 (278)
...++.+.+|||+++|++||++.+ .++++..+.+|+++||||+++++|+.+.|+++||+++++|+.+ ...|.++
T Consensus 18 ~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~-~~~~~~r 96 (482)
T 3k9v_A 18 GETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRT-ESAHPQR 96 (482)
T ss_dssp -CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHT-CCSSCCC
T ss_pred cccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHh-cCCCCCC
Confidence 345567789999999999999876 2357888999999999999999999999999999999999977 4567777
Q ss_pred Cchhh---hhhcccCcccccccCCCchHHHHHhhhhhhcc-CcchhhhhHHHHHHHHHHHHHHHHHhcc-CCCccchHHH
Q 039787 108 MVPDA---ACSYNHQEIGMVWLPVSTPWKNLRKICNLHIF-SSHKLDANQDIRRKKIKHLLAYVEENCR-VGQAIVIGQA 182 (278)
Q Consensus 108 ~~~~~---~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~vd~~~~ 182 (278)
+.... .......+.|+++.+ |+.|+++||+++ +.| +.+.++.+.+.+.++++++++.+.+... .++++|+.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~~~-~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~ 174 (482)
T 3k9v_A 97 LEIKPWKAYRDHRNEAYGLMILE-GQEWQRVRSAFQ-KKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSE 174 (482)
T ss_dssp CCCHHHHHHHHHHTCCCCTTTCC-HHHHHHHHHHHH-HHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHH
T ss_pred CCchHHHHHHHhcCCCCCceeCC-CchHHHHHHHhh-HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHH
Confidence 64321 222222367787776 999999999999 775 7888999999999999999999976443 4668999999
Q ss_pred HHHHHHHHHHHHHhcccc---cC---ccHHHHHHHHHHHHHHhCCCccccccc--cccccchhhHHHHHHHHHHHHHHHH
Q 039787 183 VFNTSLNVLSNTIFSVDL---VD---PTAREFKDIVWGIMTELGKPNLSDNFP--LLKKLDLQGIRRRMTIHYSKIFEVF 254 (278)
Q Consensus 183 ~~~~~~~vi~~~~fG~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p--~l~~~~~~~~~~~~~~~~~~~~~~~ 254 (278)
+..+++|+|+.++||.++ ++ +...++.+.+..++..... ...+| ++.++ .....++..+..+.+.+++
T Consensus 175 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~l-~~~~~~~~~~~~~~~~~~~ 250 (482)
T 3k9v_A 175 LNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGK---MMVTPVELHKRL-NTKVWQAHTLAWDTIFKSV 250 (482)
T ss_dssp HHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGG---GSSSCHHHHHHH-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHH---HHhhhHHHHHhc-CCHHHHHHHHHHHHHHHHH
Confidence 999999999999999988 21 2345677777666554332 12233 23333 2233566667778888999
Q ss_pred HHHHHHHHHhh
Q 039787 255 DRLIDQRLDQR 265 (278)
Q Consensus 255 ~~~i~~~~~~~ 265 (278)
.++|++++++.
T Consensus 251 ~~~i~~r~~~~ 261 (482)
T 3k9v_A 251 KPCIDNRLQRY 261 (482)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999888654
No 7
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.97 E-value=3.5e-29 Score=208.23 Aligned_cols=222 Identities=23% Similarity=0.364 Sum_probs=171.8
Q ss_pred CCCCCCCCCCCCCeeeccccC-CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhh
Q 039787 36 GSEQQPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAAC 114 (278)
Q Consensus 36 ~~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~ 114 (278)
++.+.||||+++|++||++.+ ..+++..+.+|+++||+||++++|+.+.|+++||+++++|+.++...|.+++......
T Consensus 7 ~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~ 86 (476)
T 3e6i_A 7 SKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFH 86 (476)
T ss_dssp ---CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGGG
T ss_pred CCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchhh
Confidence 346789999999999999998 5788999999999999999999999999999999999999988777888776555444
Q ss_pred hcccCcccccccCCCchHHHHHhhhhhhccCcchh--hhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHH
Q 039787 115 SYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKL--DANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLS 192 (278)
Q Consensus 115 ~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~ 192 (278)
.+. +.|+++++ |+.|+++|++.. +.|+...+ ..+.+.+.++++++++.+.+. .+.++|+.+.+..+++|+|+
T Consensus 87 ~~~--~~~l~~~~-g~~w~~~Rr~~~-~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~dvi~ 160 (476)
T 3e6i_A 87 AHR--DRGIIFNN-GPTWKDIRRFSL-TTLRNYGMGKQGNESRIQREAHFLLEALRKT--QGQPFDPTFLIGCAPCNVIA 160 (476)
T ss_dssp GGT--TSSSTTCC-STTHHHHHHHHH-HHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT--TTSCBCTHHHHTHHHHHHHH
T ss_pred eec--CCCEEecC-CcHHHHHHHHHH-HHHHhcCCCchHHHHHHHHHHHHHHHHHHHh--CCCCcChHHHHHHHHHHHHH
Confidence 333 23777776 999999999988 77765443 346789999999999999742 46789999999999999999
Q ss_pred HHHhcccccC--ccHHHHHHHHHHHHHHhCCC--ccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 193 NTIFSVDLVD--PTAREFKDIVWGIMTELGKP--NLSDNFP-LLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 193 ~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
.++||.++.. +...++...+.+.+...... .+...+| ++.++ +...++..++.+.+.+++.++|+++++..
T Consensus 161 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l--p~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 236 (476)
T 3e6i_A 161 DILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYL--PGSHRKVIKNVAEVKEYVSERVKEHHQSL 236 (476)
T ss_dssp HHHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTS--CSHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999832 23344555555555544322 2334456 56554 33456777888999999999999988754
No 8
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.97 E-value=3.4e-29 Score=208.45 Aligned_cols=223 Identities=20% Similarity=0.327 Sum_probs=171.6
Q ss_pred CCCCCCCCCCCCeeeccccCCCC---chHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhh
Q 039787 37 SEQQPPGPTPYPVIGNLLELGDK---PHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA 113 (278)
Q Consensus 37 ~~~~~pgp~~~p~~g~~~~~~~~---~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~ 113 (278)
+.+.||||+++|++|+++.+... ++..+.+++++||||+++++++.+.++++||+.+++|+.++...|++++.....
T Consensus 10 ~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~~ 89 (481)
T 3czh_A 10 PMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLF 89 (481)
T ss_dssp --CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHH
T ss_pred CCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHHH
Confidence 35689999999999999877323 788999999999999999999999999999999999998766678777654333
Q ss_pred hhcccCcccccccCCCchHHHHHhhhhhhccCcchh--hhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHH
Q 039787 114 CSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKL--DANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVL 191 (278)
Q Consensus 114 ~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi 191 (278)
..+. .+.|+++..+|+.|+++|++++ ++|+...+ ..+.+.+.++++++++.+.+. .++++|+.+.+..+++|+|
T Consensus 90 ~~~~-~~~~~~~~~~g~~w~~~R~~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi 165 (481)
T 3czh_A 90 MKMT-KMGGLLNSRYGRGWVDHRRLAV-NSFRYFGYGQKSFESKILEETKFFNDAIETY--KGRPFDFKQLITNAVSNIT 165 (481)
T ss_dssp HHHH-TTCSSTTCCSSHHHHHHHHHHH-HHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT--TTCCBCCHHHHHHHHHHHH
T ss_pred Hhhc-CCCCeEeCCCChHHHHHHHHHH-HHHHHhcCChHHHHHHHHHHHHHHHHHHHHc--CCCCcCHHHHHHHHHHHHH
Confidence 3232 2346666556999999999999 99976544 678899999999999999742 4567999999999999999
Q ss_pred HHHHhccccc--CccHHHHHHHHHHHHHHhCCCc--cccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 192 SNTIFSVDLV--DPTAREFKDIVWGIMTELGKPN--LSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 192 ~~~~fG~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+.++||.++. +++..++.+.+.+.+....... +...+|+++++| ....++..++.+.+.+++.++|+++++.
T Consensus 166 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp-~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 241 (481)
T 3czh_A 166 NLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILP-FGKHQQLFRNAAVVYDFLSRLIEKASVN 241 (481)
T ss_dssp HHHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCS-SSHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCC-chHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999873 2333445555555555433221 455678876653 2345667788889999999999998864
No 9
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.97 E-value=1.1e-29 Score=209.81 Aligned_cols=219 Identities=14% Similarity=0.189 Sum_probs=176.6
Q ss_pred CCCCCCCCC-CCeeeccccCCCCchHHHHHHHHHhC-CceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhh
Q 039787 38 EQQPPGPTP-YPVIGNLLELGDKPHKSLAKLAKIHG-PIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACS 115 (278)
Q Consensus 38 ~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~ 115 (278)
.+.||||++ +|++||++.+..+++.++.+|+++|| +||++++++.+.|+++||+++++++.++...|++++.......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 81 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP 81 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence 467899665 99999998887788999999999999 9999999999999999999999999877777777765444333
Q ss_pred cccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHH-HHHHhccCCCccchHHHHHHHHHHHHHHH
Q 039787 116 YNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLA-YVEENCRVGQAIVIGQAVFNTSLNVLSNT 194 (278)
Q Consensus 116 ~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~-~~~~~~~~~~~vd~~~~~~~~~~~vi~~~ 194 (278)
.. |.|+++..+|+.|+++|++++ ++|+.++++.+.+.+.++++++++ .|.+ .++++|+.+.+..+++++++.+
T Consensus 82 ~~--g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~---~~~~vd~~~~~~~~~~~~i~~~ 155 (450)
T 3gw9_A 82 VF--GEGVAYAAPYPRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFMAANWDK---DEGEINLLEDCSTMIINTACQC 155 (450)
T ss_dssp HH--CTTSGGGSCHHHHHHHHHHHH-HTTSGGGCTTHHHHHHHHHHHHHHHHSCS---SEEEEEHHHHHHHHHHHHHHHH
T ss_pred Hh--cCCcccCCCcHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHhcc---CCCcccHHHHHHHHHHHHHHHH
Confidence 32 567777656999999999999 999999999999999999999999 6642 3457999999999999999999
Q ss_pred HhcccccC-ccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 195 IFSVDLVD-PTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 195 ~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
+||.++.. .+..++.+.+..+..... .+...+|++.++| ....++..++.+.+.+++.++|+++++..
T Consensus 156 ~fG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~lp-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 224 (450)
T 3gw9_A 156 LFGEDLRKRLDARRFAQLLAKMESSLI--PAAVFLPILLKLP-LPQSARCHEARTELQKILSEIIIARKEEE 224 (450)
T ss_dssp HSCHHHHHHSCHHHHHHHHHHHHHTCC--GGGGTCGGGGGSC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCcchhhhhhhHHHHHHHHHHHhccc--cchhcccchhccC-CchhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99998832 224566666666544332 3455788887773 34456777888999999999999888643
No 10
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.96 E-value=8.3e-29 Score=205.98 Aligned_cols=220 Identities=21% Similarity=0.332 Sum_probs=159.4
Q ss_pred CCCCCCCCCCCeeeccccC-CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhc
Q 039787 38 EQQPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSY 116 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 116 (278)
.+.||||+++|++|+++.+ .++++..+.+++++||||+++++++.+.|+++||+.+++|+.++...|.+++........
T Consensus 10 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~ 89 (477)
T 1r9o_A 10 GKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERA 89 (477)
T ss_dssp CBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCTT
T ss_pred CCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhhc
Confidence 4578999999999999887 456788899999999999999998889999999999999997666677765543222222
Q ss_pred ccCcccccccCCCchHHHHHhhhhhhccCcc--hhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHH
Q 039787 117 NHQEIGMVWLPVSTPWKNLRKICNLHIFSSH--KLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNT 194 (278)
Q Consensus 117 ~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~ 194 (278)
. .|.|+++++ |+.|+++|+++. +.|+.. .++.+.+.+.++++++++.|.+. .++++|+.+.+..+++|+|+.+
T Consensus 90 ~-~~~~l~~~~-g~~w~~~Rr~~~-~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~~ 164 (477)
T 1r9o_A 90 N-RGFGIVFSN-GKKWKEIRRFSL-MTLRNFGMGKRSIEDRVQEEARCLVEELRKT--KASPCDPTFILGCAPCNVICSI 164 (477)
T ss_dssp T-CTTSSTTCC-HHHHHHHHHHHH-HHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT--TTSCBCTHHHHHHHHHHHHHHH
T ss_pred c-CCCceEecC-ChHHHHHHHHHH-HHHHHhCCChHHHHHHHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHHHHH
Confidence 1 356777775 999999999998 899887 45678999999999999999742 3568999999999999999999
Q ss_pred HhcccccC--ccHHHHHHHHHHHHHHhCCC--cccccccc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 195 IFSVDLVD--PTAREFKDIVWGIMTELGKP--NLSDNFPL-LKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 195 ~fG~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+||.++.. ++...+.+.+.+.+...... .+...+|+ ++++ +...++..++.+.+.+++.++|+++++.
T Consensus 165 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l--p~~~~~~~~~~~~~~~~~~~~i~~r~~~ 237 (477)
T 1r9o_A 165 IFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYF--PGTHNKLLKNVAFMKSYILEKVKEHQES 237 (477)
T ss_dssp HHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCCSCC--TTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhc--chHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998732 22334444444444332211 23446676 4343 3334566778888999999999998864
No 11
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.96 E-value=7.9e-29 Score=206.05 Aligned_cols=220 Identities=20% Similarity=0.304 Sum_probs=171.8
Q ss_pred CCCCCCCCCCCeeeccccC-CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhc
Q 039787 38 EQQPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSY 116 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 116 (278)
.+.||||+++|++|+++.+ .++++..+.+++++||||+++++++.+.|+++||+.+++|+.++...|.+++........
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~ 88 (476)
T 2fdv_A 9 GKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWV 88 (476)
T ss_dssp CBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHH
T ss_pred CCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhh
Confidence 3578999999999999988 577889999999999999999999999999999999999997666677765543322222
Q ss_pred ccCcccccccCCCchHHHHHhhhhhhccCcchh--hhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHH
Q 039787 117 NHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKL--DANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNT 194 (278)
Q Consensus 117 ~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~ 194 (278)
. .+.|+++++ |+.|+++|++++ ++|+...+ +.+.+.+.++++++++.|.+. .+.++|+.+++..+++|+|+.+
T Consensus 89 ~-~~~~l~~~~-g~~~~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~~ 163 (476)
T 2fdv_A 89 F-KGYGVVFSN-GERAKQLRRFSI-ATLRDFGVGKRGIEERIQEEAGFLIDALRGT--GGANIDPTFFLSRTVSNVISSI 163 (476)
T ss_dssp H-TTCSSSSCC-HHHHHHHHHHHH-HHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHHH
T ss_pred c-CCCCeEecC-chHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHHHHH
Confidence 2 256787775 999999999999 99988766 789999999999999999742 4568999999999999999999
Q ss_pred Hhccccc--CccHHHHHHHHHHHHHHhCCC--cccccccc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 195 IFSVDLV--DPTAREFKDIVWGIMTELGKP--NLSDNFPL-LKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 195 ~fG~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+||.++. +++..++.+.+.+.+...... .+...+|+ ++++ +...++..++.+.+.+++.++|+++++.
T Consensus 164 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 236 (476)
T 2fdv_A 164 VFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHL--PGPQQQAFQLLQGLEDFIAKKVEHNQRT 236 (476)
T ss_dssp HHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTS--CSHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhc--CcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999883 223345555555555433211 13345676 5554 2345667788889999999999998864
No 12
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.96 E-value=4.3e-30 Score=214.23 Aligned_cols=158 Identities=23% Similarity=0.317 Sum_probs=138.3
Q ss_pred CCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhc-CCCCCCCCchhhhhhc
Q 039787 38 EQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNH-DSSFCNRMVPDAACSY 116 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~-~~~~~~~~~~~~~~~~ 116 (278)
++.+|||+++|++||++.+..+++.++.+|+++||||+++++|+.+.|+++||+++++|+.++ ...|.+++.......
T Consensus 13 ~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~- 91 (485)
T 3nxu_A 13 KLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF- 91 (485)
T ss_dssp HHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGG-
T ss_pred hCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccccc-
Confidence 456899999999999999877888999999999999999999999999999999999999776 466766654433221
Q ss_pred ccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHh
Q 039787 117 NHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIF 196 (278)
Q Consensus 117 ~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~f 196 (278)
.+.++++.+ |+.|+++|++++ ++|+.++++.+.+.+.++++++++.+.+....+.++|+.+.+..+++|+|+.++|
T Consensus 92 --~~~~l~~~~-g~~w~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~f 167 (485)
T 3nxu_A 92 --MKSAISIAE-DEEWKRLRSLLS-PTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSF 167 (485)
T ss_dssp --GGGSTTTCC-HHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHH
T ss_pred --cccCccccC-CcHHHHHHhhcC-hhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHc
Confidence 256676666 999999999999 9999999999999999999999999976555678899999999999999999999
Q ss_pred cccc
Q 039787 197 SVDL 200 (278)
Q Consensus 197 G~~~ 200 (278)
|.++
T Consensus 168 G~~~ 171 (485)
T 3nxu_A 168 GVNI 171 (485)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 9998
No 13
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.96 E-value=9.1e-29 Score=205.68 Aligned_cols=219 Identities=17% Similarity=0.303 Sum_probs=167.3
Q ss_pred CCCCCCCCCCCeeeccccC-CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhc
Q 039787 38 EQQPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSY 116 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 116 (278)
.+.||||+++|++|+++.+ .++++..+.+++++||||+++++++.+.|+++||+.+++|+.++...|.+++........
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~ 88 (476)
T 1po5_A 9 GKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPI 88 (476)
T ss_dssp CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCSC
T ss_pred CCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhh
Confidence 4678999999999999988 678899999999999999999999999999999999999997766777766543333222
Q ss_pred ccCcccccccCCCchHHHHHhhhhhhccCcc--hhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHH
Q 039787 117 NHQEIGMVWLPVSTPWKNLRKICNLHIFSSH--KLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNT 194 (278)
Q Consensus 117 ~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~--~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~ 194 (278)
. .+.|+++++ |+.|+++|++++ +.|+.. .++.+.+.+.++++++++.|.+. .++++|+.+.+..+++|+|+.+
T Consensus 89 ~-~~~~l~~~~-g~~w~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~ 163 (476)
T 1po5_A 89 F-QGYGVIFAN-GERWRALRRFSL-ATMRDFGMGKRSVEERIQEEARCLVEELRKS--KGALLDNTLLFHSITSNIICSI 163 (476)
T ss_dssp C-SSCCCCCSS-HHHHHHHHHHHH-HHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHHH
T ss_pred c-CCCceEecC-CcHHHHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHhc--CCCccCHHHHHHHHHHHHHHHH
Confidence 2 356787775 999999999998 899877 45778999999999999999742 4568999999999999999999
Q ss_pred HhcccccCccHHHHHHHHHHHHHHhCC---C--cccccccc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 195 IFSVDLVDPTAREFKDIVWGIMTELGK---P--NLSDNFPL-LKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 195 ~fG~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~p~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+||.++...+ .++......+...... . .+...+|+ ++++ +...++..++.+.+.+++.++|+++++.
T Consensus 164 ~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~l--p~~~~~~~~~~~~~~~~~~~~i~~r~~~ 236 (476)
T 1po5_A 164 VFGKRFDYKD-PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHF--PGTHRQIYRNLQEINTFIGQSVEKHRAT 236 (476)
T ss_dssp HHSSCCCTTC-HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTS--SCSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HcCCCCCCCC-HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhc--CcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999874222 2343333333332211 1 12335665 4443 2224566778889999999999998864
No 14
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.96 E-value=5.4e-28 Score=201.26 Aligned_cols=224 Identities=15% Similarity=0.231 Sum_probs=162.3
Q ss_pred CCCCCCCCCCCCeeeccccC-CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhh
Q 039787 37 SEQQPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACS 115 (278)
Q Consensus 37 ~~~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~ 115 (278)
+.++||||+++|++||++.+ ..+.+..+.+|+++|||||++++|+.++|+|+||+++++|+.+++..|++++.......
T Consensus 8 ~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~ 87 (479)
T 3tbg_A 8 KGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQI 87 (479)
T ss_dssp -CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGG
T ss_pred CCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHH
Confidence 35789999999999999988 56788899999999999999999999999999999999999888888888876655543
Q ss_pred cc--cCcccccccCCCchHHHHHhhhhhhccCcchhhh--hHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHH
Q 039787 116 YN--HQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDA--NQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVL 191 (278)
Q Consensus 116 ~~--~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~--~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi 191 (278)
+. ..+.+++++.+|+.|+++|+++. +.|+...+.. +.+.+......+.+.+. ...+..+|+.+.+..+++|++
T Consensus 88 ~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~ 164 (479)
T 3tbg_A 88 LGFGPRSQGVFLARYGPAWREQRRFSV-STLRNLGLGKKSLEQWVTEEAACLCAAFA--NHSGRPFRPNGLLDKAVSNVI 164 (479)
T ss_dssp GTCBTTBCCSTTCCSSHHHHHHHHHHH-HHHHHTTSTTCHHHHHHHHHHHHHHHHHH--TTTTCCBCTHHHHHHHHHHHH
T ss_pred hccCCCCCceeeCCCCHHHHHHHHHHH-HHhcchhhhHHHHHHHHHHHHHHHHHHHH--hccCCcccHHHHHHHHHHHHH
Confidence 32 22456777777999999999999 8887776653 44555666666666655 235678999999999999999
Q ss_pred HHHHhcccccC--ccHHHHHHHHHHHHHHhCCC--ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 192 SNTIFSVDLVD--PTAREFKDIVWGIMTELGKP--NLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 192 ~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
+.++||.++.. +....+.+............ ......|+..++ ....++.....+...+.+.+.++++++..
T Consensus 165 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (479)
T 3tbg_A 165 ASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAFLTQLDELLTEHRMTW 240 (479)
T ss_dssp HHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999832 22333444444333333221 122233444332 33344555666777777777777766543
No 15
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.96 E-value=7.4e-29 Score=205.42 Aligned_cols=218 Identities=13% Similarity=0.142 Sum_probs=167.6
Q ss_pred CCCCCCCCCC-CCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhh
Q 039787 37 SEQQPPGPTP-YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACS 115 (278)
Q Consensus 37 ~~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~ 115 (278)
..+.||+|++ +|++||++.+..+++.++.+++++|||||++++++.+.|+++||+++++++.++...|.+++.......
T Consensus 9 g~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~ 88 (461)
T 3ld6_A 9 GVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT 88 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH
T ss_pred CCCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhh
Confidence 3457788875 999999998888899999999999999999999999999999999999999887777777654433321
Q ss_pred cccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHH
Q 039787 116 YNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTI 195 (278)
Q Consensus 116 ~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~ 195 (278)
.. .|.|+++..+|+.|+++|++++ ++|+...++.+.+.+.++++++++.|. ++..+|+.+.+..+++++++.++
T Consensus 89 ~~-~g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~ 162 (461)
T 3ld6_A 89 PV-FGKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWG----ESGEKNVFEALSELIILTASHCL 162 (461)
T ss_dssp HH-HCTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGC----SEEEEEHHHHHHHHHHHHHHHHH
T ss_pred cc-CCCccccCCCcHHHHHHHHhcc-ccccHHHHhhhhHHHHHHHHHHHHHHh----hcCCccHHHHHHHHHHHHHHHHH
Confidence 11 2577777666999999999999 999999999999999999999998885 34568999999999999999999
Q ss_pred hcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 196 FSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 196 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
||.++.....+.+......+..... .....+|. ++|.+ ..++..++.+.+.+++.+.|+++++..
T Consensus 163 fG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~-~~~~~~~~~~~l~~~~~~~i~~r~~~~ 227 (461)
T 3ld6_A 163 HGKEIRSQLNEKVAQLYADLDGGFS--HAAWLLPG--WLPLP-SFRRRDRAHREIKDIFYKAIQKRRQSQ 227 (461)
T ss_dssp TCHHHHHTCCHHHHHHHHHHHTTSS--HHHHHSCT--TSCCH-HHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCcchhhhhhhhhhhhhhhhhhhhh--hHHHhhhh--hccCc-HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9998833333344444443333222 12222332 22223 355667788899999999999887654
No 16
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.95 E-value=5.1e-27 Score=194.76 Aligned_cols=218 Identities=17% Similarity=0.192 Sum_probs=163.4
Q ss_pred CCCCCCCCCCeeeccccC-CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhc-
Q 039787 39 QQPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSY- 116 (278)
Q Consensus 39 ~~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~- 116 (278)
+.+|||+++|++|+++.+ .++++..+.+|+++||||+++++++.+.|+++||+++++|+.+ ..|.+... .....+
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~--~~f~~~~~-~~~~~~~ 79 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE--SRFDKNLS-QALKFVR 79 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCT--TTEEECCC-HHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhh--cCcCcCch-hHHHHHH
Confidence 468999999999999888 4578888999999999999999999999999999999999953 23433222 111111
Q ss_pred ccCccccccc-CCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHH
Q 039787 117 NHQEIGMVWL-PVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTI 195 (278)
Q Consensus 117 ~~~g~~~~~~-~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~ 195 (278)
...+.|+++. .+|+.|+++|++++ ++|+...++.+.+.+.++++++++.|.+. ..++++|+.+.+..+++|+|+.++
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~ 157 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLCG 157 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEHHHHHHHHHHHHHHHHH
Confidence 1124677776 45999999999999 99999999999999999999999999742 235689999999999999999999
Q ss_pred hcccccC---ccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 196 FSVDLVD---PTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 196 fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
||.+++. ++...+.+.+...+...... ....|++.++ +....++..++.+.+.+++.++|++|++.
T Consensus 158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 226 (470)
T 2ij2_A 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNK--LQRANPDDPA-YDENKRQFQEDIKVMNDLVDKIIADRKAS 226 (470)
T ss_dssp HSCCCCGGGCSSCCHHHHHHHHHHHHHHHT--C---CTTSGG-GHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccccCCCCHHHHHHHHHHHHHHHH--HhhhhhHhhc-cchHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998732 23345666555554432211 0112444444 33345666778888999999999988764
No 17
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.95 E-value=1.6e-26 Score=192.77 Aligned_cols=224 Identities=17% Similarity=0.217 Sum_probs=161.9
Q ss_pred cCCCCCCCCCCCCCCeeeccccC-----CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCC
Q 039787 34 KAGSEQQPPGPTPYPVIGNLLEL-----GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRM 108 (278)
Q Consensus 34 ~~~~~~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~ 108 (278)
..++++.+|||+..++. +++.+ .+.++..+.+|+++|||||++++|+.+.|+++||+++++|+.++ ..|.+++
T Consensus 4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~ 81 (487)
T 3n9y_A 4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPERF 81 (487)
T ss_dssp CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCC
T ss_pred CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCC
Confidence 34557788999877765 65544 13677889999999999999999999999999999999999765 4677766
Q ss_pred chhhh---hhcccCcccccccCCCchHHHHHhhhhhh-ccCcchhhhhHHHHHHHHHHHHHHHHHhc----cCCCccchH
Q 039787 109 VPDAA---CSYNHQEIGMVWLPVSTPWKNLRKICNLH-IFSSHKLDANQDIRRKKIKHLLAYVEENC----RVGQAIVIG 180 (278)
Q Consensus 109 ~~~~~---~~~~~~g~~~~~~~~g~~w~~~R~~~~~~-~f~~~~l~~~~~~~~~~~~~l~~~~~~~~----~~~~~vd~~ 180 (278)
..... ......+.|+++.+ |+.|+++|++++ + +|+.+.++.+.+.+.++++++++.|.+.. .++.++|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~l~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~ 159 (487)
T 3n9y_A 82 LIPPWVAYHQYYQRPIGVLLKK-SAAWKKDRVALN-QEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDIS 159 (487)
T ss_dssp CCHHHHHHHHHTTCCCCGGGCC-HHHHHHHHHHHH-HHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCH
T ss_pred CCcHHHHHHHHccccCCCccCC-cHHHHHHHHhcC-cccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHH
Confidence 43321 12222356777665 999999999999 7 59999999999999999999999996422 234579999
Q ss_pred HHHHHHHHHHHHHHHhccccc---C---ccHHHHHHHHHHHHHHhCCCccccccc-c-ccccchhhHHHHHHHHHHHHHH
Q 039787 181 QAVFNTSLNVLSNTIFSVDLV---D---PTAREFKDIVWGIMTELGKPNLSDNFP-L-LKKLDLQGIRRRMTIHYSKIFE 252 (278)
Q Consensus 181 ~~~~~~~~~vi~~~~fG~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~p-~-l~~~~~~~~~~~~~~~~~~~~~ 252 (278)
+.+..+++|+|+.++||.++. + .....+.+.+..++.... ....+| + +.++ .....++..+..+.+.+
T Consensus 160 ~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~l~~~~-~~~~~~~~~~~~~~~~~ 235 (487)
T 3n9y_A 160 DDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSV---PMLNLPPDLFRLF-RTKTWKDHVAAWDVIFS 235 (487)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHG---GGTTSCHHHHHHH-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHH---HHHhcCHHHHhhc-ccHHHHHHHHHHHHHHH
Confidence 999999999999999999982 1 123446666665555443 122333 2 2222 22334455556666777
Q ss_pred HHHHHHHHHHHhh
Q 039787 253 VFDRLIDQRLDQR 265 (278)
Q Consensus 253 ~~~~~i~~~~~~~ 265 (278)
++.++|++++++.
T Consensus 236 ~~~~~i~~~~~~~ 248 (487)
T 3n9y_A 236 KADIYTQNFYWEL 248 (487)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777777665543
No 18
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.94 E-value=1.8e-27 Score=197.19 Aligned_cols=219 Identities=13% Similarity=0.165 Sum_probs=165.1
Q ss_pred CCCCCCCCC-CCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhh
Q 039787 35 AGSEQQPPG-PTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA 113 (278)
Q Consensus 35 ~~~~~~~pg-p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~ 113 (278)
.++.+.||| |+++|++||++.+..+++.++.+++++|||||++++++.+.|++++|+.+++++.++...+.+++.....
T Consensus 7 ~~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~ 86 (461)
T 3i3k_A 7 PAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL 86 (461)
T ss_dssp ---CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred CCCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHh
Confidence 344678999 8899999999888778899999999999999999999999999999999999998766665543322211
Q ss_pred -hhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHH
Q 039787 114 -CSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLS 192 (278)
Q Consensus 114 -~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~ 192 (278)
..+ .|.|+++..+|+.|+++|+++. +.|+...++.+.+.+.++++++++.|. .+..+|+.+.+..+++++++
T Consensus 87 ~~~~--~g~g~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~~~ 159 (461)
T 3i3k_A 87 TTPV--FGKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWG----ESGEKNVFEALSELIILTAS 159 (461)
T ss_dssp HHHH--HCTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGC----SEEEEEHHHHHHHHHHHHHH
T ss_pred hhhh--cCCeeeeCCCcHHHHHHHHHHh-hhhCHHHHHHHHHHHHHHHHHHHHHhh----hcCCcCHHHHHHHHHHHHHH
Confidence 122 2577777766999999999999 999999999999999999999999885 23458999999999999999
Q ss_pred HHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 193 NTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 193 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
+++||.++.......+.+.+..+..... .....+| .+++. ...++..++.+.+.+++.++|+++++..
T Consensus 160 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P--~~l~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 227 (461)
T 3i3k_A 160 HCLHGKEIRSQLNEKVAQLYADLDGGFS--HAAWLLP--GWLPL-PSFRRRDRAHREIKDIFYKAIQKRRQSQ 227 (461)
T ss_dssp HHHTCHHHHHTCCHHHHHHHHHHHTTSS--HHHHHSC--TTSCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHccHhhhhHHHHHHHHHHHHHHhccc--cchhhcc--cccCC-HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999998732222344444443332211 1122333 22322 2356677888999999999999887643
No 19
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.94 E-value=1.7e-26 Score=190.30 Aligned_cols=210 Identities=14% Similarity=0.150 Sum_probs=157.5
Q ss_pred CCCCCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhh
Q 039787 35 AGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAAC 114 (278)
Q Consensus 35 ~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~ 114 (278)
.++.+.||||+++|++|+++.+..+++ ++.+++++|||+++++++|.+.|+++||+.+++|+.++...|+.+... ...
T Consensus 8 ~~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~-~~~ 85 (444)
T 2ve3_A 8 LNSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPL-STR 85 (444)
T ss_dssp -CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCH-HHH
T ss_pred CCCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhH-HHH
Confidence 344678999999999999987744556 788999999999999988889999999999999997655556532211 111
Q ss_pred hcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHH
Q 039787 115 SYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNT 194 (278)
Q Consensus 115 ~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~ 194 (278)
... +..++++.+ |+.|+++|++++ ++|+.++++.+.+.+.++++++++.|. .++++|+.+.+..+++|+++++
T Consensus 86 ~~~-g~~~l~~~~-g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~----~~~~vd~~~~~~~~~~~vi~~~ 158 (444)
T 2ve3_A 86 ILL-GPNALATQM-GEIHRSRRKILY-QAFLPRTLDSYLPKMDGIVQGYLEQWG----KANEVIWYPQLRRMTFDVAATL 158 (444)
T ss_dssp HHH-CTTSGGGCC-HHHHHHHHHHHH-GGGCHHHHHTTHHHHHHHHHHHHHHHH----HSSEEEHHHHHHHHHHHHHHHH
T ss_pred HHh-CccccccCC-chHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhc----CCCcEeHHHHHHHHHHHHHHHH
Confidence 221 123676665 999999999999 999999999999999999999999996 3568999999999999999999
Q ss_pred HhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 195 IFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 195 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+|| +...++ .++.+.+......... +|+ .+|.. ..++..++.+.+.+++.++|++++++
T Consensus 159 ~fG-~~~~~~-~~~~~~~~~~~~~~~~------~~~--~~p~~-~~~~~~~~~~~~~~~~~~~i~~r~~~ 217 (444)
T 2ve3_A 159 FMG-EKVSQN-PQLFPWFETYIQGLFS------LPI--PLPNT-LFGKSQRARALLLAELEKIIKARQQQ 217 (444)
T ss_dssp HTC-HHHHSC-TTHHHHHHHHHHHHSS------CCC--CSTTS-HHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HcC-CCcccH-HHHHHHHHHHHHHHhc------CCc--cCCCc-HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999 442222 4455555554443321 121 12122 23556677888999999999998865
No 20
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.94 E-value=2.2e-26 Score=190.27 Aligned_cols=212 Identities=12% Similarity=0.149 Sum_probs=146.5
Q ss_pred CCCCC-CCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcc
Q 039787 39 QQPPG-PTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYN 117 (278)
Q Consensus 39 ~~~pg-p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~ 117 (278)
+.||| |+++|++|+++.+..+++..+.+++++||||+++++++.+.++++||+.+++|+.++...|++++.........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 83 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF 83 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH
T ss_pred CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc
Confidence 57887 88899999998887788999999999999999999999999999999999999977656676665432222221
Q ss_pred cCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHhc
Q 039787 118 HQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFS 197 (278)
Q Consensus 118 ~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG 197 (278)
|.+++ .+ |+.|+++|++++ ++|+.++++.+.+.+.++++++++.|. .++++|+.+.+..+++|+++.++||
T Consensus 84 --g~~~~-~~-~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~~~----~~~~vd~~~~~~~~~~~vi~~~~fG 154 (455)
T 2cib_A 84 --GEGVV-FD-ASPERRKEMLHN-AALRGEQMKGHAATIEDQVRRMIADWG----EAGEIDLLDFFAELTIYTSSACLIG 154 (455)
T ss_dssp --C-----------------------CCHHHHHHHHHHHHHHHHHHHTTCC----SEEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred --CCccc-cC-cHHHHHHHhhhc-cccCHHHHHHHHHHHHHHHHHHHHHhC----CCCcEeHHHHHHHHHHHHHHHHHcC
Confidence 34543 44 999999999998 999999999999999999999999875 2357999999999999999999999
Q ss_pred ccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 198 VDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
.++......++.+.+..+..... .+...+||+ +.+ ..++..++.+.+.+++.++|++|++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l---~~~-~~~~~~~~~~~~~~~~~~~i~~r~~~~ 216 (455)
T 2cib_A 155 KKFRDQLDGRFAKLYHELERGTD--PLAYVDPYL---PIE-SFRRRDEARNGLVALVADIMNGRIANP 216 (455)
T ss_dssp HHHHTTCCHHHHHHHHHHHTTCC--GGGGTCTTC---SCH-HHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCcchhhhHHHHHHHHHHHhhhh--HHHHhcccC---CCh-hHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99843222456666555533221 122344532 122 245566788889999999999988654
No 21
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.94 E-value=6.2e-27 Score=194.19 Aligned_cols=212 Identities=16% Similarity=0.227 Sum_probs=141.5
Q ss_pred CCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCC-CCCCchhhhhhc
Q 039787 38 EQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSF-CNRMVPDAACSY 116 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~-~~~~~~~~~~~~ 116 (278)
...||||+++|++|+++.+..+++.++.++++ ||||+++++++.+.++++||+.+++|+.++ .| .+++........
T Consensus 22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~ 98 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGL 98 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-------------
T ss_pred CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHh
Confidence 44678999999999999887788999999988 999999999999999999999999999765 55 333322222222
Q ss_pred ccCc-ccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHH
Q 039787 117 NHQE-IGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTI 195 (278)
Q Consensus 117 ~~~g-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~ 195 (278)
.| .++++.+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|. .++++|+.+.+..+++++++.++
T Consensus 99 --~g~~~l~~~d-g~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~vi~~~~ 170 (467)
T 3dbg_A 99 --LGKEGVATAN-GPLHRRQRRTIQ-PAFRLDAIPAYGPIMEEEAHALTERWQ----PGKTVDATSESFRVAVRVAARCL 170 (467)
T ss_dssp --------------------CGGGH-HHHSTTTSTTTHHHHHHHHHHHHHHSC----TTSCEEHHHHHHHHHHHHHHHHH
T ss_pred --cCCCCcccCC-cHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhc----cCCcCcHHHHHHHHHHHHHHHHH
Confidence 23 6676665 999999999999 999999999999999999999999985 46789999999999999999999
Q ss_pred hcccccCccHHHHHHHHHHHHHHhCCCccccccc--cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 196 FSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFP--LLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 196 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
||.++..+....+...+..+...... ...+| ++.++ +....++..++.+.+.+++.++|++++++
T Consensus 171 ~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 237 (467)
T 3dbg_A 171 LRGQYMDERAERLCVALATVFRGMYR---RMVVPLGPLYRL-PLPANRRFNDALADLHLLVDEIIAERRAS 237 (467)
T ss_dssp SCSSCCHHHHHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHHHHHTTC
T ss_pred hCCcccchhHHHHHHHHHHHHHHHHH---HhccchhhhhhC-CChHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998544455666666666554322 12333 23333 22334566778889999999999988764
No 22
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.92 E-value=2.1e-23 Score=172.48 Aligned_cols=204 Identities=15% Similarity=0.176 Sum_probs=151.2
Q ss_pred CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhh-hhhc---ccCcccccccCCCchH
Q 039787 57 GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDA-ACSY---NHQEIGMVWLPVSTPW 132 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~~~g~~w 132 (278)
+..++..+.+|+++|||||++++++.+.|+++||+++++|+.+ ..|.+++.... .... ...|.|+++..+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 4567888999999999999999999999999999999999953 34444433221 1111 1125677777669999
Q ss_pred HHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHhcccccC--ccHHHHHH
Q 039787 133 KNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLVD--PTAREFKD 210 (278)
Q Consensus 133 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~--~~~~~~~~ 210 (278)
+++|++++ ++|+.++++.+.+.+.++++++++.+.+....+.++|+.+.+..+++|+++.++||.++.. ....++..
T Consensus 87 ~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~ 165 (456)
T 3mdm_A 87 HKQRRVID-LAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQ 165 (456)
T ss_dssp HHHHHHHG-GGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHH
T ss_pred HHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHH
Confidence 99999999 9999999999999999999999999976555667899999999999999999999999832 22245555
Q ss_pred HHHHHHHHhCCCccccccccccccch-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 039787 211 IVWGIMTELGKPNLSDNFPLLKKLDL-QGIRRRMTIHYSKIFEVFDRLIDQRLDQRQE 267 (278)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 267 (278)
.+..+...+.. ...|++.++|. ....+...++.+.+.+++.++|+++++....
T Consensus 166 ~~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~ 219 (456)
T 3mdm_A 166 AVKLMLEGITA----SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKR 219 (456)
T ss_dssp HHHHHHHHHHH----HHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH----HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 55555443321 11233334321 1223456677788889999999988876543
No 23
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.91 E-value=2.6e-25 Score=185.60 Aligned_cols=216 Identities=14% Similarity=0.111 Sum_probs=155.2
Q ss_pred CCCCCCCCCCC-CCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCC-CCCCCCchhhh
Q 039787 36 GSEQQPPGPTP-YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDS-SFCNRMVPDAA 113 (278)
Q Consensus 36 ~~~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~-~~~~~~~~~~~ 113 (278)
+..+.||||++ +|++|+++.+..+++.++.+++++||||+++++++.++++++||+.+++++.++.. .+..++.....
T Consensus 10 ~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~~~~ 89 (491)
T 3v8d_A 10 RQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFALSA 89 (491)
T ss_dssp CCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHHHHH
T ss_pred cCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHHHHH
Confidence 34678999998 79999999998999999999999999999999999999999999999999965431 22222211111
Q ss_pred hhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhcc---CCCccchHHHHHHHHHHH
Q 039787 114 CSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCR---VGQAIVIGQAVFNTSLNV 190 (278)
Q Consensus 114 ~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~---~~~~vd~~~~~~~~~~~v 190 (278)
..+ |.+.+...+|+.|+++|+.+. ++|+.+.++.+.+.+.+++.++++.+..... .+..+++.+++..+++++
T Consensus 90 ~~~---g~~~~~~~~g~~~~~~Rr~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 165 (491)
T 3v8d_A 90 KAF---GHRSIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEA 165 (491)
T ss_dssp HHH---TCCCCCGGGSSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHHH
T ss_pred Hhc---CCcccccccchhHHHHHHHHH-HHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHHH
Confidence 222 334444445999999999998 9999999999999999999999986522111 345689999999999999
Q ss_pred HHHHHhcccccC--ccHHHHHHHHHHHHHHhCCCccccccccccc-cchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 039787 191 LSNTIFSVDLVD--PTAREFKDIVWGIMTELGKPNLSDNFPLLKK-LDLQGIRRRMTIHYSKIFEVFDRLIDQRL 262 (278)
Q Consensus 191 i~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 262 (278)
++.++||.++.. +..+.+.+.+.++.. +...+|++.+ + +....++..++.+++.+++.+.+++++
T Consensus 166 ~~~~~fG~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~-p~~~~~~~~~a~~~l~~~~~~~~~~~~ 233 (491)
T 3v8d_A 166 GYLTIFGRDLTRRDTQKAHILNNLDNFKQ------FDKVFPALVAGL-PIHMFRTAHNAREKLAESLRHENLQKR 233 (491)
T ss_dssp HHHHHHCBCCSCGGGHHHHHHHHHHHHHH------HHHHHHHHHTTC-CGGGCHHHHHHHHHHHHHTSHHHHTTC
T ss_pred HHHHHcCccccccchhhhhhHHHHHHHHH------HHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999998732 222334444433322 2233443222 2 233356667777777777776665443
No 24
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.91 E-value=1.1e-23 Score=172.85 Aligned_cols=198 Identities=15% Similarity=0.188 Sum_probs=143.3
Q ss_pred CCCCCCCCCCCeeeccc-cCCCCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhh
Q 039787 38 EQQPPGPTPYPVIGNLL-ELGDKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACS 115 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~-~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~ 115 (278)
.+.||||+++|++|++. .+..+++..+.++ ++||||+++++ ++.+.|+++||+.+++|+.++ .|.+++.......
T Consensus 25 ~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~ 101 (436)
T 2cd8_A 25 QQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTPL 101 (436)
T ss_dssp ---------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSCC
T ss_pred ccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccccccc
Confidence 46789999999999976 4456789999999 89999999997 778899999999999999764 5666543211111
Q ss_pred c---ccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHH
Q 039787 116 Y---NHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVL 191 (278)
Q Consensus 116 ~---~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi 191 (278)
. ...+.++++.+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ ..++++|+.+.+ ..+++++|
T Consensus 102 ~~~~~~~~~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~vi 177 (436)
T 2cd8_A 102 TEAEAALNHNMLESD-PPRHTRLRKLVA-REFTMRRVELLRPRVQEIVDGLVDAMLA--APDGRADLMESLAWPLPITVI 177 (436)
T ss_dssp CTTGGGTCCSGGGCC-TTHHHHHHHHHG-GGSSHHHHHTTHHHHHHHHHHHHHHHHT--CTTSCEEHHHHTTTHHHHHHH
T ss_pred ccccccccccccccC-chHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCcchHHHHHHHHHHHHH
Confidence 0 11246676655 999999999999 9999999999999999999999999974 135689999977 57999999
Q ss_pred HHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 192 SNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 192 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+. +||.+.. +.+++.+....++.. . + + ++..++.+.+.+++.++|+++++.
T Consensus 178 ~~-~~G~~~~--~~~~~~~~~~~~~~~------~---~------~----~~~~~~~~~~~~~~~~~i~~r~~~ 228 (436)
T 2cd8_A 178 SE-LLGVPEP--DRAAFRVWTDAFVFP------D---D------P----AQAQTAMAEMSGYLSRLIDSKRGQ 228 (436)
T ss_dssp HH-HHTCCGG--GHHHHHHHHHHHHSC------S---S------T----THHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HH-HhCCCHH--HHHHHHHHHHHHhcc------C---C------H----HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 98 7999863 234555544443320 0 0 1 234567788888999999887753
No 25
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.90 E-value=9.3e-23 Score=166.69 Aligned_cols=194 Identities=10% Similarity=0.039 Sum_probs=147.3
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhC-CceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchh--hhhhcccCcccc
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHG-PIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPD--AACSYNHQEIGM 123 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~g~~~ 123 (278)
.|++|++..+..+++.++.+++++|| ||+++.+++.+.++++||+.++.++ + ...|.+.+... ....+. +..++
T Consensus 8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~-~~~~~~~~~~~~~~~~~~~-g~~~l 84 (417)
T 1izo_A 8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-D-TDRFQRQNALPKRVQKSLF-GVNAI 84 (417)
T ss_dssp CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-C-TTTEECTTCSCHHHHTTTT-CTTCG
T ss_pred CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-c-ccccccccccccchhhhhc-cccce
Confidence 38999998887788999999999998 9999998889999999999998654 3 33454432221 112222 12456
Q ss_pred cccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHhcccccCc
Q 039787 124 VWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLVDP 203 (278)
Q Consensus 124 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~ 203 (278)
++.+ |+.|+++|++++ ++|+.+.++.+.+.+.+.++++++.|. .++++|+.+.+..+++++|+.+ ||.++++.
T Consensus 85 ~~~d-g~~h~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~----~~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~ 157 (417)
T 1izo_A 85 QGMD-GSAHIHRKMLFL-SLMTPPHQKRLAELMTEEWKAAVTRWE----KADEVVLFEEAKEILCRVACYW-AGVPLKET 157 (417)
T ss_dssp GGCC-HHHHHHHHHHHH-HTSSHHHHHHHHHHHHHHHHHHHHHHT----TSSEEEHHHHHHHHHHHHHHHH-HTCCCCTT
T ss_pred eecC-ChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHh----cCCCeeHHHHHHHHHHHHHHHH-cCCCCCch
Confidence 6555 999999999999 999999999999999999999999996 3568999999999999999998 69988544
Q ss_pred cHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 204 TAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+..++.+.+..++..... + .+ ..++..++.+.+.+++.++|++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~------------~-~~-~~~~~~~~~~~~~~~~~~~i~~r~~~ 204 (417)
T 1izo_A 158 EVKERADDFIDMVDAFGA------------V-GP-RHWKGRRARPRAEEWIEVMIEDARAG 204 (417)
T ss_dssp THHHHHHHHHHHHHHTTC------------C-SH-HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhccc------------C-Cc-cchhHHHHHHHHHHHHHHHHHHHHhh
Confidence 445555555444443211 0 11 13445678889999999999998875
No 26
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.90 E-value=1.2e-24 Score=176.24 Aligned_cols=198 Identities=14% Similarity=0.183 Sum_probs=151.7
Q ss_pred CCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCC-chhhhhhcccCcc
Q 039787 43 GPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRM-VPDAACSYNHQEI 121 (278)
Q Consensus 43 gp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~g~ 121 (278)
+++.+|++||++.+..+++..+.+++++||||++ ++++.+.++++||+.+++|+.++ .|.+++ .......+. |.
T Consensus 3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~--g~ 77 (389)
T 1n97_A 3 RLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT--GR 77 (389)
T ss_dssp ECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--CS
T ss_pred ccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--CC
Confidence 4456799999988866788999999999999999 88888999999999999999765 777765 222222222 46
Q ss_pred cccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHhccccc
Q 039787 122 GMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLV 201 (278)
Q Consensus 122 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~ 201 (278)
++++.+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|. ++++|+.+.+..+++|+++.++||.++.
T Consensus 78 ~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~-----~~~~dl~~~~~~~~~~vi~~~~fG~~~~ 150 (389)
T 1n97_A 78 GLLTDW-GESWKEARKALK-DPFLPKNVRGYREAMEEEARAFFGEWR-----GEERDLDHEMLALSLRLLGRALFGKPLS 150 (389)
T ss_dssp STTTCC-HHHHHHHHHHHC-GGGSHHHHHTTHHHHHHHHHHHHHTCC-----SCCEEHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccccCC-cHHHHHHHHHhC-cccCHHHHHHHHHHHHHHHHHHHHHcc-----CCcCcHHHHHHHHHHHHHHHHHcCCcch
Confidence 777765 999999999999 999999999999999999999999875 4689999999999999999999999975
Q ss_pred CccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 039787 202 DPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQR 261 (278)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 261 (278)
+ ++.+.+.++...... ..++++.++|. ...++..++.+.+.+++.++|+++
T Consensus 151 -~---~~~~~~~~~~~~~~~----~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~i~~r 201 (389)
T 1n97_A 151 -P---SLAEHALKALDRIMA----QTRSPLALLDL-AAEARFRKDRGALYREAEALIVHP 201 (389)
T ss_dssp -H---HHHHHHHHHHHHHHH----HHHCGGGGGCH-HHHHHHHHHHHHHHHHHGGGTTST
T ss_pred -H---HHHHHHHHHHHHHHH----HHhhHHHhcCC-chhHHHHHHHHHHHHHHHHHHHHH
Confidence 2 566666555543321 11122233322 234556677777888887777654
No 27
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.90 E-value=1.7e-22 Score=165.05 Aligned_cols=197 Identities=11% Similarity=0.072 Sum_probs=145.1
Q ss_pred CCCCCCCCeeeccccCCCCchHHHHHHHHHh-CCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchh--hhhhcc
Q 039787 41 PPGPTPYPVIGNLLELGDKPHKSLAKLAKIH-GPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPD--AACSYN 117 (278)
Q Consensus 41 ~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~y-G~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~--~~~~~~ 117 (278)
|||| |++|+++.+..+++.++.+++++| |||+++.+++.+.+++++|+.++ ++.+ ...|++.+... ....+.
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~-~~~f~~~~~~~~~~~~~~~ 78 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYD-TTRFEREGAMPVAIQKTLL 78 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTC-TTTEECTTCSCHHHHTTTS
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhc-ccccccccccchhhhhhcc
Confidence 6776 889999888678899999999999 79999998888999999999986 6644 34565543221 112221
Q ss_pred cCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHhc
Q 039787 118 HQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFS 197 (278)
Q Consensus 118 ~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG 197 (278)
+..+++..+ |+.|+++|++++ ++|+.+.++.+.+.+.+.++++++.|.+ ++++|+.+.+..+++++++.+ ||
T Consensus 79 -g~~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~~~~----~~~vdl~~~~~~~~~~vi~~~-~G 150 (415)
T 3awm_A 79 -GQGGVQGLD-GETHRHRKQMFM-GLMTPERVRALAQLFEAEWRRAVPGWTR----KGEIVFYDELHEPLTRAVCAW-AG 150 (415)
T ss_dssp -CSSSGGGCC-HHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHHHH----HSEEEHHHHHHHHHHHHHHHH-HT
T ss_pred -CCcceeecC-cHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHhhcc----CCcEeHHHHHHHHHHHHHHHH-cC
Confidence 124566555 999999999999 9999999999999999999999999973 357999999999999999999 89
Q ss_pred ccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 198 VDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.++.+.+..++.+.+..++.... + +....++..++.+.+.+++.++|++++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~---------~-----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 203 (415)
T 3awm_A 151 VPLPDDEAGNRAGELRALFDAAG---------S-----ASPRHLWSRLARRRVDAWAKRIIEGIRAG 203 (415)
T ss_dssp CCCCGGGHHHHHHHHHHHHHSTT---------C-----SSHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCcchHHHHHHHHHHHHHHhc---------c-----cCchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98744433444444433333211 0 11123456678889999999999998875
No 28
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.89 E-value=1.6e-21 Score=158.80 Aligned_cols=199 Identities=14% Similarity=0.146 Sum_probs=142.8
Q ss_pred CCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc-CeeEEEecCHHHHHHHHHhcC-CCCCCCCchhhhh---
Q 039787 40 QPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-QVTTVVVSSASMAKAILQNHD-SSFCNRMVPDAAC--- 114 (278)
Q Consensus 40 ~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~i~dp~~~~~i~~~~~-~~~~~~~~~~~~~--- 114 (278)
.||||+++|++|++.. +++..+.+|+ +||||+++.++ |.+.+++++++.+++++.++. ..+..++......
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~ 77 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG 77 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence 4899999999999864 7888999996 69999999864 667778999999999997652 2233333221111
Q ss_pred -hcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHH
Q 039787 115 -SYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSN 193 (278)
Q Consensus 115 -~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~ 193 (278)
....++.++++.+ |+.|+++|++++ ++|+.++++.+.+.+.++++++++.|.+....+.++|+.+.+...+.++++.
T Consensus 78 ~~~~~~~~~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~ 155 (404)
T 1jfb_A 78 KQAAKAKPTFVDMD-PPEHMHQRSMVE-PTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIY 155 (404)
T ss_dssp HHHTTSCCCGGGCC-TTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHH
T ss_pred cchhcccCcccccC-chhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHH
Confidence 0111234566665 999999999999 9999999999999999999999999975443456899999999999999999
Q ss_pred HHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 194 TIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 194 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.+||.++++ .++.......+. .+ . ...++..++.+.+.+++.++|++++++
T Consensus 156 ~~~G~~~~~---~~~~~~~~~~~~-----------~~---~---~~~~~~~~~~~~~~~~~~~~i~~r~~~ 206 (404)
T 1jfb_A 156 TLLGVPFND---LEYLTQQNAIRT-----------NG---S---STAREASAANQELLDYLAILVEQRLVE 206 (404)
T ss_dssp HHHTCCGGG---HHHHHHHHHHHH-----------CT---T---SCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHcCCCHHH---HHHHHHHHHHHh-----------cc---C---cchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999998632 233332222111 00 0 113455677788999999999988764
No 29
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.87 E-value=2.6e-21 Score=157.43 Aligned_cols=193 Identities=13% Similarity=0.128 Sum_probs=142.2
Q ss_pred CCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEe----c-cC-eeEEEecCHHHHHHHH-HhcCCCCCCCCch
Q 039787 38 EQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLK----F-GQ-VTTVVVSSASMAKAIL-QNHDSSFCNRMVP 110 (278)
Q Consensus 38 ~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~----~-~~-~~~v~i~dp~~~~~i~-~~~~~~~~~~~~~ 110 (278)
.+.||||+++|+. +..+++..+.+| ++||||++++ + ++ .+.|+++||+.+++|+ .++ .|.+++..
T Consensus 9 ~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~~ 80 (406)
T 1ued_A 9 APLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQF 80 (406)
T ss_dssp CCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCCC
T ss_pred CCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--cccccccc
Confidence 5578999999876 457889999999 9999999999 6 78 8999999999999999 443 34454431
Q ss_pred hhhh-hcc---cCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHH-
Q 039787 111 DAAC-SYN---HQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFN- 185 (278)
Q Consensus 111 ~~~~-~~~---~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~- 185 (278)
.... .+. ..+.++++.+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ .|+++|+.+.+..
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~-g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~ 155 (406)
T 1ued_A 81 TQSKSGAHVEAQFVGQISTYD-PPEHTRLRKMLT-PEFTVRRIRRMEPAIQSLIDDRLDLLEA---EGPSADLQGLFADP 155 (406)
T ss_dssp ---------CGGGTTCGGGCC-TTHHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH---HCTTEEHHHHTHHH
T ss_pred cccccccccccccccccccCC-CHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHHHH
Confidence 1110 010 0134666665 999999999999 9999999999999999999999999973 3568999998875
Q ss_pred HHHHHHHHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 186 TSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 186 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+++++++ .+||.+.. +.+++.+.+..++.. .. . .++..++.+.+.+++.++|++++++
T Consensus 156 ~~~~vi~-~~~G~~~~--~~~~~~~~~~~~~~~--------------~~-~---~~~~~~~~~~~~~~~~~~i~~r~~~ 213 (406)
T 1ued_A 156 VGAHALC-ELLGIPRD--DQREFVRRIRRNADL--------------SR-G---LKARAADSAAFNRYLDNLLARQRAD 213 (406)
T ss_dssp HHHHHHH-HHHTCCHH--HHHHHHHHHHHCC-----------------C-C---HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHH-HHcCCCHH--HHHHHHHHHHHHHhc--------------cC-C---HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999 57999752 223444433322110 00 1 2345677788999999999988764
No 30
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.86 E-value=3.3e-20 Score=151.21 Aligned_cols=196 Identities=13% Similarity=0.144 Sum_probs=143.4
Q ss_pred CCCCCCCCCCeeeccccCCCCchHHHHHHHHHh-CCceEEec-cCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhc
Q 039787 39 QQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIH-GPIMTLKF-GQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSY 116 (278)
Q Consensus 39 ~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~y-G~i~~~~~-~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 116 (278)
..||+|+++|.+.....+..+++..+.+| ++| |||+++++ ++.+.++++||+.+++|+.++ .+.+++........
T Consensus 5 ~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~ 81 (412)
T 2zbx_A 5 ATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDNFPAT 81 (412)
T ss_dssp ---CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTTSCCC
T ss_pred CCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCccccccccc
Confidence 45778888886633344567899999999 788 99999997 789999999999999999653 24443321111111
Q ss_pred -------ccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHH-HHHH
Q 039787 117 -------NHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVF-NTSL 188 (278)
Q Consensus 117 -------~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~-~~~~ 188 (278)
...+.++++.+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ .++++|+.+.+. .+++
T Consensus 82 ~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~ 156 (412)
T 2zbx_A 82 SPRFEAVRESPQAFIGLD-PPEHGTRRRMTI-SEFTVKRIKGMRPEVEEVVHGFLDEMLA---AGPTADLVSQFALPVPS 156 (412)
T ss_dssp SGGGC----CCCCGGGCC-TTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHH
T ss_pred ccccccccccccccccCC-cHHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHH
Confidence 00134666665 999999999999 9999999999999999999999999973 356899999887 4999
Q ss_pred HHHHHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 189 NVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 189 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
++++. +||.+.+ +.+.+...+..++.. ... ++..++.+.+.+++.++|+++++.
T Consensus 157 ~vi~~-~~G~~~~--~~~~~~~~~~~~~~~-----------------~~~--~~~~~~~~~~~~~~~~~i~~r~~~ 210 (412)
T 2zbx_A 157 MVICR-LLGVPYA--DHEFFQDASKRLVQS-----------------TDA--QSALTARNDLAGYLDGLITQFQTE 210 (412)
T ss_dssp HHHHH-HHTCCGG--GHHHHHHHHHHHHHC-----------------SSH--HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHH-HcCCCHH--HHHHHHHHHHHHhcc-----------------CcH--HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99997 7999863 234555554443321 011 455677888999999999988764
No 31
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.86 E-value=3.6e-21 Score=157.72 Aligned_cols=210 Identities=9% Similarity=0.046 Sum_probs=144.6
Q ss_pred CCCCCCCCCCCCeeeccccCC-----CCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHhcCCCCCCCCc-
Q 039787 37 SEQQPPGPTPYPVIGNLLELG-----DKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQNHDSSFCNRMV- 109 (278)
Q Consensus 37 ~~~~~pgp~~~p~~g~~~~~~-----~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~- 109 (278)
.++.||| ++|++.... .+++..+.++++ ||||++++. |+.+.+++++++.+++++.+ ...|++++.
T Consensus 4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~-~~~fs~r~~~ 76 (428)
T 1cpt_A 4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQ-PGLFSNAEGS 76 (428)
T ss_dssp TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHC-TTTEESSSSC
T ss_pred ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcC-chhccCcccc
Confidence 3567888 788765442 347778888876 799999997 67899999999999999965 456777654
Q ss_pred hhhh---h-h-c---cc----CcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCcc
Q 039787 110 PDAA---C-S-Y---NH----QEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAI 177 (278)
Q Consensus 110 ~~~~---~-~-~---~~----~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~v 177 (278)
.... . . + .+ .+.++++.+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ .++++
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~-g~~~~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~ 151 (428)
T 1cpt_A 77 EILYDQNNEAFMRSISGGCPHVIDSLTSMD-PPTHTAYRGLTL-NWFQPASIRKLEENIRRIAQASVQRLLD---FDGEC 151 (428)
T ss_dssp SSCCCHHHHHHHHHHTTTSSCSSCCGGGCC-TTHHHHHHHHHH-TTSSHHHHGGGHHHHHHHHHHHHHHHHT---SSSEE
T ss_pred ccCCcccccchhccccccccccccccccCC-hHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHH---hCCCe
Confidence 2211 1 1 1 11 134666665 999999999999 9999999999999999999999999974 23579
Q ss_pred chHHH-HHHHHHHHHHHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHH
Q 039787 178 VIGQA-VFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDR 256 (278)
Q Consensus 178 d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (278)
|+.+. ...+++|+|+.+ ||.+.++ .+++.+....+..... .....+||+..+ .+...++..++.+.+.+++.+
T Consensus 152 d~~~~~~~~~~~~vi~~~-fG~~~~~--~~~~~~~~~~~~~~~~--~~~~~~P~l~~~-~~~~~~~~~~~~~~~~~~~~~ 225 (428)
T 1cpt_A 152 DFMTDCALYYPLHVVMTA-LGVPEDD--EPLMLKLTQDFFGVHE--PDEQAVAAPRQS-ADEAARRFHETIATFYDYFNG 225 (428)
T ss_dssp EHHHHTTTTHHHHHHHHH-HTCCGGG--HHHHHHHHHTTTCC-------------------CHHHHHHHHHHHHHHHHHH
T ss_pred ehHHHHHhhhHHHHHHHH-cCCCHhH--HHHHHHHHHHHHhccc--cccccccccccc-chhhHHHHHHHHHHHHHHHHH
Confidence 99755 467999999999 9998632 3345444333322111 112234555443 123345677888899999999
Q ss_pred HHHHHHHh
Q 039787 257 LIDQRLDQ 264 (278)
Q Consensus 257 ~i~~~~~~ 264 (278)
+|++++++
T Consensus 226 ~i~~r~~~ 233 (428)
T 1cpt_A 226 FTVDRRSC 233 (428)
T ss_dssp HHHHHTTS
T ss_pred HHHHHHcC
Confidence 99988763
No 32
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.85 E-value=2.1e-21 Score=161.98 Aligned_cols=159 Identities=14% Similarity=0.140 Sum_probs=121.1
Q ss_pred CCCCCCCCC-CCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchh-hhhh
Q 039787 38 EQQPPGPTP-YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPD-AACS 115 (278)
Q Consensus 38 ~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~-~~~~ 115 (278)
.+.||||++ +|++||++.+..+++..+.+++++||+||++++++.++|+++||+++++++.++.. +..++... ....
T Consensus 12 ~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~~~~~~ 90 (491)
T 3dax_A 12 TGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHFATSAK 90 (491)
T ss_dssp TTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHHHHHHH
T ss_pred CCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHHHHHHH
Confidence 567899887 89999999887788999999999999999999999999999999999999965431 22221111 1111
Q ss_pred cccCccccc-ccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHh---ccCCCccchHHHHHHHHHHHH
Q 039787 116 YNHQEIGMV-WLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEEN---CRVGQAIVIGQAVFNTSLNVL 191 (278)
Q Consensus 116 ~~~~g~~~~-~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~---~~~~~~vd~~~~~~~~~~~vi 191 (278)
.. |.+++ ..+ |+.|+++|+.+. ++|+.+.++.+.+.+.+++.++++..... ......+++...+..++++++
T Consensus 91 ~~--g~~~~~~~~-g~~w~~~r~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 166 (491)
T 3dax_A 91 AF--GHRSIDPMD-GNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAG 166 (491)
T ss_dssp HH--TCCCCCGGG-TSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHHH
T ss_pred Hc--CCCcccccc-hhHHHHHHHHHH-HhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHHh
Confidence 11 44555 444 899999999998 89999999988888888888777665321 112346789999999999999
Q ss_pred HHHHhccccc
Q 039787 192 SNTIFSVDLV 201 (278)
Q Consensus 192 ~~~~fG~~~~ 201 (278)
+.++||.++.
T Consensus 167 ~~~~fG~~~~ 176 (491)
T 3dax_A 167 YLTIFGRDLT 176 (491)
T ss_dssp HHHHHCBCST
T ss_pred HHHHcCcccc
Confidence 9999999873
No 33
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.83 E-value=1.5e-20 Score=156.99 Aligned_cols=162 Identities=10% Similarity=0.128 Sum_probs=122.6
Q ss_pred CCCCCCCCCCCCCeeeccccC-----CCCchHHHHHHHHHhCC-ceEEeccCeeE-------EEecCHHHHHHHHHhcC-
Q 039787 36 GSEQQPPGPTPYPVIGNLLEL-----GDKPHKSLAKLAKIHGP-IMTLKFGQVTT-------VVVSSASMAKAILQNHD- 101 (278)
Q Consensus 36 ~~~~~~pgp~~~p~~g~~~~~-----~~~~~~~~~~~~~~yG~-i~~~~~~~~~~-------v~i~dp~~~~~i~~~~~- 101 (278)
.+.+.||||.++|++|+++.+ ..+++.++.+++++||+ ||++++++.++ +++.+++..+.++....
T Consensus 25 ~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v 104 (495)
T 3dsk_A 25 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKV 104 (495)
T ss_dssp CCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTE
T ss_pred CCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccccc
Confidence 356789999999999998766 47889999999999999 99999988777 66777776666553211
Q ss_pred ---CCCCCCCchhhhhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccc
Q 039787 102 ---SSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIV 178 (278)
Q Consensus 102 ---~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd 178 (278)
..+........ ..+...+...+...+|+.|+++|+++. +.|+... +.+.+.+.++++++++.|.+....++++|
T Consensus 105 ~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~-~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~~vd 181 (495)
T 3dsk_A 105 EKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLF-FLLKSSR-NRIFPEFQATYSELFDSLEKELSLKGKAD 181 (495)
T ss_dssp ECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHH-HHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHSSEE
T ss_pred cccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 22212111111 222111123333345999999999999 9998755 88999999999999999975433456899
Q ss_pred hHHHHHHHHHHHHHHHHhcccc
Q 039787 179 IGQAVFNTSLNVLSNTIFSVDL 200 (278)
Q Consensus 179 ~~~~~~~~~~~vi~~~~fG~~~ 200 (278)
+.++++.++++++++++||.+.
T Consensus 182 l~~~~~~~~~~~i~~~~~G~~~ 203 (495)
T 3dsk_A 182 FGGSSDGTAFNFLARAFYGTNP 203 (495)
T ss_dssp SHHHHHHHHHHHHHHHHHSCCG
T ss_pred HHHHHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999987
No 34
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.83 E-value=2.1e-19 Score=145.27 Aligned_cols=180 Identities=14% Similarity=0.129 Sum_probs=136.3
Q ss_pred CCCchHHHHHHHHHhCCceEEeccC----eeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcccCcccccccCCCchH
Q 039787 57 GDKPHKSLAKLAKIHGPIMTLKFGQ----VTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPW 132 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG~i~~~~~~~----~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 132 (278)
..+++..+.++ ++||||+++++++ .+.++++||+.+++++ ++...|.+++...........+.+++.. +|+.|
T Consensus 11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~-~g~~~ 87 (384)
T 3oo3_A 11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAIL-ADHERFSSMRPVDDEADRALLPGILQAY-DPPDH 87 (384)
T ss_dssp TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHH-HCTTTEECSCCCC-----CCCTTCGGGC-CTTHH
T ss_pred ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHH-hCchhccCCccccccccccccccccccC-CChhH
Confidence 57899999999 5999999999876 8999999999999999 4456787776544322212223444444 49999
Q ss_pred HHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHhcccccCccHHHHHHHH
Q 039787 133 KNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLVDPTAREFKDIV 212 (278)
Q Consensus 133 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~ 212 (278)
+++|++++ ++|+.++++.+.+.+.++++++++.|.+ .++++|+.+.+...+.+++...+||.+.++ .+++.+.+
T Consensus 88 ~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~--~~~~~~~~ 161 (384)
T 3oo3_A 88 TRLRRTVA-PAYSARRMERLRPRIEEIVEECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLGVPRDD--QAELSRMI 161 (384)
T ss_dssp HHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHTCCGGG--HHHHHHHH
T ss_pred HHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcCCCHHH--HHHHHHHH
Confidence 99999999 9999999999999999999999999964 567899999999988777777889998632 34555555
Q ss_pred HHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 213 WGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 213 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
..++. . ...++..++.+.+.+++.++|++++++
T Consensus 162 ~~~~~--~-----------------~~~~~~~~~~~~~~~~~~~~i~~~~~~ 194 (384)
T 3oo3_A 162 RESRE--S-----------------RLPRQRTLSGLGIVNYTKRLTSGKRRD 194 (384)
T ss_dssp HHHHH--C-----------------SCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhc--c-----------------CChHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 54443 0 013455677788899999999888764
No 35
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.83 E-value=3.5e-20 Score=154.92 Aligned_cols=159 Identities=12% Similarity=0.122 Sum_probs=119.0
Q ss_pred CCCCCCCCCCC-CCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchh-hh
Q 039787 36 GSEQQPPGPTP-YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPD-AA 113 (278)
Q Consensus 36 ~~~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~-~~ 113 (278)
+..+.||||++ +|++||++.+..+++.++.+|+++|||||++++++.++|+++||+++++++.++...+..++... ..
T Consensus 15 ~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~ 94 (498)
T 3b6h_A 15 RRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLM 94 (498)
T ss_dssp CCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHHH
T ss_pred cCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHHH
Confidence 33568899988 89999998886678999999999999999999999999999999999999966543233322221 11
Q ss_pred hhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHh-ccCCCccchHHHHHHHHHHHHH
Q 039787 114 CSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEEN-CRVGQAIVIGQAVFNTSLNVLS 192 (278)
Q Consensus 114 ~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~vd~~~~~~~~~~~vi~ 192 (278)
... .|.+++..+ |+.| |+++. ++|+.+.++.+.+.+.+++.+.++..... ......+++...+..+++++++
T Consensus 95 ~~~--~g~~~~~~~-~~~~---rr~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~ 167 (498)
T 3b6h_A 95 ERI--FDVQLPHYS-PSDE---KARMK-LTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGY 167 (498)
T ss_dssp HHT--SCCCCTTCC-HHHH---HHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHH
T ss_pred HHH--cCCCccccC-HHHH---HHHHH-HhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHH
Confidence 112 245555544 6666 55666 78888888888888877777777665321 2233457899999999999999
Q ss_pred HHHhccccc
Q 039787 193 NTIFSVDLV 201 (278)
Q Consensus 193 ~~~fG~~~~ 201 (278)
.++||.+++
T Consensus 168 ~~~fG~~~~ 176 (498)
T 3b6h_A 168 LTLYGIEAL 176 (498)
T ss_dssp HHHHCBSCS
T ss_pred HhhcCcccc
Confidence 999999873
No 36
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.83 E-value=8e-20 Score=148.94 Aligned_cols=194 Identities=12% Similarity=0.130 Sum_probs=137.3
Q ss_pred ccCCCCCCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhh
Q 039787 33 RKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDA 112 (278)
Q Consensus 33 ~~~~~~~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~ 112 (278)
+..++.+.+|||+. ..+++..+.++++ |||| +.++.+.++++||+.+++++.++ ..|++++....
T Consensus 13 ~~~~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~ 77 (411)
T 2jjn_A 13 RTLTTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRVI 77 (411)
T ss_dssp ----CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGGS
T ss_pred cccCCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcccccC
Confidence 34555777888871 2467888889976 9998 45567899999999999999764 46777654321
Q ss_pred hhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHH-HHHHHHHHH
Q 039787 113 ACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQA-VFNTSLNVL 191 (278)
Q Consensus 113 ~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~-~~~~~~~vi 191 (278)
......+.++++.+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++. .++++|+.+. ...+++|+|
T Consensus 78 -~~~~~~~~~~~~~~-g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~------~~~~~d~~~~~~~~~~~~vi 148 (411)
T 2jjn_A 78 -EGASPTPGMIHEID-PPEHRALRKVVS-SAFTPRTISDLEPRIRDVTRSLLAD------AGESFDLVDVLAFPLPVTIV 148 (411)
T ss_dssp -TTCCCCTTCGGGCC-TTHHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHT------SCSEEEHHHHTTTHHHHHHH
T ss_pred -CcccccccccccCC-chHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHhc------CCCceeHHHHHHHHHHHHHH
Confidence 11112345676665 999999999999 9999999999999999999999987 2347999855 468999999
Q ss_pred HHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 192 SNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 192 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+.+ ||.+.++. +++.+....+..... |. ++ .+...++..++.+.+.+++.++|++++++
T Consensus 149 ~~~-fG~~~~~~--~~~~~~~~~~~~~~~--------~~--~~-~p~~~~~~~~~~~~~~~~~~~~i~~r~~~ 207 (411)
T 2jjn_A 149 AEL-LGLPPMDH--EQFGDWSGALVDIQM--------DD--PT-DPALAERIADVLNPLTAYLKARCAERRAD 207 (411)
T ss_dssp HHH-HTCCSCCC--STTCCHHHHHHHSCC--------SC--TT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHH-cCCCHHHH--HHHHHHHHHHHhccC--------cc--cc-chHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 998 99987322 233333343333211 11 11 12334566778889999999999998864
No 37
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.82 E-value=1.9e-19 Score=146.75 Aligned_cols=197 Identities=8% Similarity=0.048 Sum_probs=142.6
Q ss_pred CCCCCCCCCCCCCCee--ecccc-----CCCCchHHHHHHHHHhC--CceEEeccCeeEEEecCHHHHHHHHHhcCCCCC
Q 039787 35 AGSEQQPPGPTPYPVI--GNLLE-----LGDKPHKSLAKLAKIHG--PIMTLKFGQVTTVVVSSASMAKAILQNHDSSFC 105 (278)
Q Consensus 35 ~~~~~~~pgp~~~p~~--g~~~~-----~~~~~~~~~~~~~~~yG--~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~ 105 (278)
.++.+.||||.+.|.. +.+-. +..+++..+.+|+ +|| ||+++...| +.++++||+.+++++.+ ...|+
T Consensus 7 ~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~f~ 83 (415)
T 2zwu_A 7 QSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRHFS 83 (415)
T ss_dssp ----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTTEE
T ss_pred cCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-ccccC
Confidence 4457899999998864 43221 2346788888885 799 999998323 68999999999999964 45677
Q ss_pred CCC-chhhhhhcccCccc-ccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH
Q 039787 106 NRM-VPDAACSYNHQEIG-MVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV 183 (278)
Q Consensus 106 ~~~-~~~~~~~~~~~g~~-~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~ 183 (278)
+++ ........ .+.+ +++.+ |+.|+++|++++ ++|+...++.+.+.+.++++++++.|.+ . +++|+.+.+
T Consensus 84 ~~~~~~~~~~~~--~~~~~l~~~~-g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~---~-~~~d~~~~~ 155 (415)
T 2zwu_A 84 SECPFIPREAGE--AYDFIPTSMD-PPEQRQFRALAN-QVVGMPVVDKLENRIQELACSLIESLRP---Q-GQCNFTEDY 155 (415)
T ss_dssp TTSCSSSHHHHH--HCCCTTTTCC-TTTTHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHGG---G-TEEEHHHHT
T ss_pred CCcccCCCCccc--cccccCccCC-CcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---c-CCccHHHHH
Confidence 765 22211111 1455 76665 999999999999 9999999999999999999999999973 2 379999765
Q ss_pred -HHHHHHHHHHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 039787 184 -FNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRL 262 (278)
Q Consensus 184 -~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 262 (278)
..+++++++.+ ||.++.+ .+++.+....++... .| . +..++.+.+.+++.++|++++
T Consensus 156 ~~~~~~~vi~~~-~G~~~~~--~~~~~~~~~~~~~~~--------~P------~-----~~~~~~~~~~~~~~~~i~~r~ 213 (415)
T 2zwu_A 156 AEPFPIRIFMLL-AGLPEED--IPHLKYLTDQMTRPD--------GS------M-----TFAEAKEALYDYLIPIIEQRR 213 (415)
T ss_dssp TTHHHHHHHHHH-HTCCGGG--HHHHHHHHHHHHSCC--------SS------S-----CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-cCCCHHH--HHHHHHHHHHHHhcc--------CH------H-----HHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999 9998742 345555544443210 12 1 344667788899999999888
Q ss_pred Hh
Q 039787 263 DQ 264 (278)
Q Consensus 263 ~~ 264 (278)
++
T Consensus 214 ~~ 215 (415)
T 2zwu_A 214 QK 215 (415)
T ss_dssp HS
T ss_pred hC
Confidence 64
No 38
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.82 E-value=4.4e-20 Score=151.42 Aligned_cols=201 Identities=12% Similarity=0.118 Sum_probs=139.7
Q ss_pred CCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEe--------ccCeeEEEecCHHHHHHHHHhcCCCCCCCCch
Q 039787 39 QQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLK--------FGQVTTVVVSSASMAKAILQNHDSSFCNRMVP 110 (278)
Q Consensus 39 ~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~--------~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~ 110 (278)
..||+|..+++++......++++.++.++ ++||||+++. +|+.+.+++++|+.+++++.+ ...|++++..
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~ 95 (433)
T 3ivy_A 18 PSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRH-SDVFSSYENG 95 (433)
T ss_dssp --CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHC-TTTEESTTTC
T ss_pred CCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcC-hhhccCCccc
Confidence 45667766776655443346799999999 7899999998 445799999999999999955 4567665543
Q ss_pred hhhh--------hcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHH
Q 039787 111 DAAC--------SYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQA 182 (278)
Q Consensus 111 ~~~~--------~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~ 182 (278)
.... .....+.+++..+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ ++++|+.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~~ 169 (433)
T 3ivy_A 96 VIPRFKNDIAREDIEVQRFVMLNMD-APHHTRLRKIIS-RGFTPRAVGRLHDELQERAQKIAAEAAA----AGSGDFVEQ 169 (433)
T ss_dssp SCCCCCTTCCHHHHHGGGGSGGGCC-TTHHHHHHHHHG-GGSCHHHHHTTHHHHHHHHHHHHHHHHH----HCEEEHHHH
T ss_pred ccccccccccccccccccCCccccC-hHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh----CCCeeHHHH
Confidence 2211 1112256677665 999999999999 9999999999999999999999999973 346899888
Q ss_pred H-HHHHHHHHHHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 039787 183 V-FNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQR 261 (278)
Q Consensus 183 ~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 261 (278)
+ ..+++++|+.+ ||.+. ++.+.+.+. ...+.. ...|.... .+..++.+.+.+++.++|+++
T Consensus 170 ~~~~~~~~vi~~l-~G~~~--~~~~~~~~~----~~~~~~----~~~p~~~~-------~~~~~~~~~~~~~~~~~i~~r 231 (433)
T 3ivy_A 170 VSCELPLQAIAGL-LGVPQ--EDRGKLFHW----SNEMTG----NEDPEYAH-------IDPKASSAELIGYAMKMAEEK 231 (433)
T ss_dssp TTSHHHHHHHHHH-HTCCH--HHHHHHHHH----HTTCSC----CCCGGGTT-------CCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH-cCCCH--HHHHHHHHH----HHHHhc----cCCchhhh-------HHHHHHHHHHHHHHHHHHHHH
Confidence 7 99999999996 99753 222233322 222111 11221110 134566778889999999888
Q ss_pred HHhh
Q 039787 262 LDQR 265 (278)
Q Consensus 262 ~~~~ 265 (278)
+++.
T Consensus 232 ~~~~ 235 (433)
T 3ivy_A 232 AKNP 235 (433)
T ss_dssp ----
T ss_pred hcCC
Confidence 7643
No 39
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.82 E-value=1.3e-19 Score=147.38 Aligned_cols=193 Identities=16% Similarity=0.220 Sum_probs=141.0
Q ss_pred CCCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEec-cCee-EEEecCHHHHHHHHHhcCCCCCCCCchhhh---
Q 039787 39 QQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKF-GQVT-TVVVSSASMAKAILQNHDSSFCNRMVPDAA--- 113 (278)
Q Consensus 39 ~~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~-~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~--- 113 (278)
+.+|+|+.+|+.++. ..+++.++.+++ +||||+++.+ +|.+ .++++||+.+++|+.+ ..|.+++.....
T Consensus 8 ~~~~~~~~~p~~~~~---~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~ 81 (406)
T 1s1f_A 8 QAVPPVRDWPAVDLP---GSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVTR 81 (406)
T ss_dssp CCSCCEEECCCCCCC---TTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBCB
T ss_pred hhccCCCCCCCCccc---ccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCccc
Confidence 456777777877663 578899999885 7999999986 5666 9999999999999965 356666433211
Q ss_pred -hh-cccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHH
Q 039787 114 -CS-YNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNV 190 (278)
Q Consensus 114 -~~-~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~v 190 (278)
.. ....+.++++.+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ .++++|+.+.+ ..+++++
T Consensus 82 ~~~~~~~~~~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v 156 (406)
T 1s1f_A 82 LAPHFIPARGAVGFLD-PPDHTRLRRSVA-AAFTARGVERVRERSRGMLDELVDAMLR---AGPPADLTEAVLSPFPIAV 156 (406)
T ss_dssp SSSSCSSCTTSGGGCC-TTHHHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTHHHHHH
T ss_pred ccccccccccccccCC-chHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHhhHhHHHH
Confidence 11 211256777766 999999999999 9999999999999999999999999974 34589998766 4799999
Q ss_pred HHHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039787 191 LSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLD 263 (278)
Q Consensus 191 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 263 (278)
++. +||.+.++ .+.+......++.... | . ++..++.+.+.+++.++|+++++
T Consensus 157 i~~-~~G~~~~~--~~~~~~~~~~~~~~~~--------~------~----~~~~~~~~~~~~~~~~~i~~r~~ 208 (406)
T 1s1f_A 157 ICE-LMGVPATD--RHSMHTWTQLILSSSH--------G------A----EVSERAKNEMNAYFSDLIGLRSD 208 (406)
T ss_dssp HHH-HHTCCGGG--HHHHHHHHHHHHHHHT--------T------C----CCCHHHHTHHHHHHHHHHHTSCC
T ss_pred HHH-HhCCCHHH--HHHHHHHHHHHHhccC--------C------H----HHHHHHHHHHHHHHHHHHHHHHh
Confidence 999 59998632 3455555554443221 1 0 12234556677788888877654
No 40
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.82 E-value=3.2e-19 Score=145.24 Aligned_cols=181 Identities=8% Similarity=0.117 Sum_probs=129.4
Q ss_pred ccCCCCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhh---ccc----Ccccccc
Q 039787 54 LELGDKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACS---YNH----QEIGMVW 125 (278)
Q Consensus 54 ~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~---~~~----~g~~~~~ 125 (278)
..+..+++..+.+| ++||||+++++ ++.+.|+++||+.+++|+.++ .|.+++....... +.. .+.++++
T Consensus 20 ~~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (408)
T 3abb_A 20 RTCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFPLIG 96 (408)
T ss_dssp CSSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCTTTT
T ss_pred cccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCcccccccccccc
Confidence 34467899999999 89999999997 789999999999999999653 2444332011100 100 1245666
Q ss_pred cCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHH-HHHHHHHHHHHhcccccCcc
Q 039787 126 LPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVF-NTSLNVLSNTIFSVDLVDPT 204 (278)
Q Consensus 126 ~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~-~~~~~vi~~~~fG~~~~~~~ 204 (278)
. +|+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ .+.++|+.+.+. .+++++++. +||.+.. +
T Consensus 97 ~-~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~--~ 168 (408)
T 3abb_A 97 V-DDPVHARQRRMLI-PSFGVKRMNAIRPRLQSLVDRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLGVPYG--D 168 (408)
T ss_dssp C-CTTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHTCCGG--G
T ss_pred C-CchHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHH--H
Confidence 5 4999999999999 9999999999999999999999999973 456899998876 599999997 7999863 2
Q ss_pred HHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 205 AREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.+.+...+..++... .+ ++..++.+.+.+++.++|++++++
T Consensus 169 ~~~~~~~~~~~~~~~--------~~-----------~~~~~~~~~~~~~~~~~i~~r~~~ 209 (408)
T 3abb_A 169 HDFFEECSRNFVGAA--------TS-----------AEADAAFGELYTYLHGLVGRKQAE 209 (408)
T ss_dssp HHHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhccc--------ch-----------HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344554443332200 01 222345566778888888887764
No 41
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.82 E-value=1.1e-18 Score=141.95 Aligned_cols=180 Identities=16% Similarity=0.217 Sum_probs=134.5
Q ss_pred CCCCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHhcCCCCCCCCc--h-hhhhhcc--cCcccccccCCC
Q 039787 56 LGDKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQNHDSSFCNRMV--P-DAACSYN--HQEIGMVWLPVS 129 (278)
Q Consensus 56 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~--~-~~~~~~~--~~g~~~~~~~~g 129 (278)
+..+++..+.++ ++||||+++++ ++.+.++++||+.+++++.++ .|.+++. . .....+. ..+.++++.+ |
T Consensus 17 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g 92 (403)
T 3aba_A 17 CPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQD-E 92 (403)
T ss_dssp STTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCC-T
T ss_pred cccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCC-c
Confidence 456888899999 89999999997 789999999999999999763 4666532 1 1110011 1256676665 9
Q ss_pred chHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCccHHHH
Q 039787 130 TPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPTAREF 208 (278)
Q Consensus 130 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~ 208 (278)
+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ .++++|+.+.+ ..+++++++. +||.+..+ .+.+
T Consensus 93 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~~ 165 (403)
T 3aba_A 93 PEHTSDRKLLA-KEFTVRRMQALRPNIQRIVDEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFGVPVER--RAEF 165 (403)
T ss_dssp THHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGG--HHHH
T ss_pred hhHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HHHH
Confidence 99999999999 9999999999999999999999999974 35679998766 4799999998 79998632 2344
Q ss_pred HHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 209 KDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
......+.... . .+ ++..++.+.+.+++.++|+++++.
T Consensus 166 ~~~~~~~~~~~-------------~--~p---~~~~~~~~~~~~~~~~~i~~r~~~ 203 (403)
T 3aba_A 166 QDIAEAMMRVD-------------Q--DA---AATEAAGMRLGGLLYQLVQERRAN 203 (403)
T ss_dssp HHHHHHHSBSS-------------S--CH---HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhcc-------------C--cH---HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44333222100 0 11 455677888999999999988865
No 42
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.81 E-value=7.2e-19 Score=144.18 Aligned_cols=186 Identities=12% Similarity=0.041 Sum_probs=139.8
Q ss_pred CCchHHHHHHHHHhCCceEEecc-------CeeEEEecCHHHHHHHHHhcCCCCCCCCch--h-hhhhcccCcccccccC
Q 039787 58 DKPHKSLAKLAKIHGPIMTLKFG-------QVTTVVVSSASMAKAILQNHDSSFCNRMVP--D-AACSYNHQEIGMVWLP 127 (278)
Q Consensus 58 ~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~--~-~~~~~~~~g~~~~~~~ 127 (278)
.+++..+.+|+ +||||+++.++ +.+.++++||+.+++|+.++ ..|++++.. . ....+...+.++++.+
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~d 121 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLD 121 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCC
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCC
Confidence 45778888885 69999999886 66899999999999999764 467776532 1 1111111156777776
Q ss_pred CCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCccHH
Q 039787 128 VSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPTAR 206 (278)
Q Consensus 128 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~ 206 (278)
|+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+. .++.++|+.+.+ ..+++++++.+ ||.++++ .+
T Consensus 122 -g~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~--~~ 195 (435)
T 2wm5_A 122 -DPRHQRLRSIVS-RAFTPKVVARIEAAVRDRAHRLVSSMIAN-NPDRQADLVSELAGPLPLQIICDM-MGIPKAD--HQ 195 (435)
T ss_dssp -TTHHHHHHHHHH-HTCCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG--HH
T ss_pred -cHHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcEehHHHHHHHHHHHHHHHH-cCCCHHH--HH
Confidence 999999999999 99999999999999999999999999753 234589998766 78999999999 9998742 34
Q ss_pred HHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 207 EFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
++.+....++.... |++.. ..++..++.+.+.+++.++|++++++
T Consensus 196 ~~~~~~~~~~~~~~--------p~~~~-----~~~~~~~~~~~~~~~~~~~i~~r~~~ 240 (435)
T 2wm5_A 196 RIFHWTNVILGFGD--------PDLAT-----DFDEFMQVSADIGAYATALAEDRRVN 240 (435)
T ss_dssp HHHHHHHHHHHTTC--------TTSCC-----CHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCC--------cchhh-----hHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 56666555544221 32111 13456778889999999999998864
No 43
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.81 E-value=8.9e-20 Score=151.49 Aligned_cols=163 Identities=9% Similarity=0.091 Sum_probs=119.6
Q ss_pred CCCCCCCCCCCCCeeeccccC-----CC-CchHHHHHHHHHhCC-ceEEecc-------CeeEEEecCHHHHHHHHHh--
Q 039787 36 GSEQQPPGPTPYPVIGNLLEL-----GD-KPHKSLAKLAKIHGP-IMTLKFG-------QVTTVVVSSASMAKAILQN-- 99 (278)
Q Consensus 36 ~~~~~~pgp~~~p~~g~~~~~-----~~-~~~~~~~~~~~~yG~-i~~~~~~-------~~~~v~i~dp~~~~~i~~~-- 99 (278)
.+.+.+|||.++|++|++..+ .. +++.++.+++++||+ ||+++++ +...|++.+++..+.++..
T Consensus 6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~ 85 (473)
T 3dan_A 6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK 85 (473)
T ss_dssp SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence 457788999999999998764 34 788999999999999 9999986 3455556666655455421
Q ss_pred --cCCCCCCCCchhhhhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCcc
Q 039787 100 --HDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAI 177 (278)
Q Consensus 100 --~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~v 177 (278)
+...+....... .....+.....+...+|+.|+++|++++ ++|+. .++.+.+.+.++++++++.|.+...+++++
T Consensus 86 ~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~h~~~R~~~~-~~f~~-~~~~~~~~i~~~~~~ll~~~~~~~~~~~~v 162 (473)
T 3dan_A 86 VEKKDLFTGTYMPS-TKLTGGYRVLSYLDPSEPRHAQLKNLLF-FMLKN-SSNRVIPQFETTYTELFEGLEAELAKNGKA 162 (473)
T ss_dssp EECSSCTTSSSCCC-GGGGTTSCCGGGCCTTSHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred eeccccccccccCC-ccccCCCcceeeeCCCcHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 112222211111 1112111123333445999999999999 99998 489999999999999999997543345689
Q ss_pred chHHHHHHHHHHHHHHHHhccccc
Q 039787 178 VIGQAVFNTSLNVLSNTIFSVDLV 201 (278)
Q Consensus 178 d~~~~~~~~~~~vi~~~~fG~~~~ 201 (278)
|+.+++..++++++++++||.++.
T Consensus 163 dl~~~~~~~~~~~i~~~~~G~~~~ 186 (473)
T 3dan_A 163 AFNDVGEQAAFRFLGRAYFNSNPE 186 (473)
T ss_dssp ECHHHHHHHHHHHHHHHHHSCCGG
T ss_pred cHHHHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999883
No 44
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.81 E-value=1.2e-18 Score=142.23 Aligned_cols=180 Identities=12% Similarity=0.135 Sum_probs=135.9
Q ss_pred CCCCchHHHHHHHHHhCCceEEecc-CeeEEEecCHHHHHHHHHhcCCCCCCCCch---hhhhhcc----cCcccccccC
Q 039787 56 LGDKPHKSLAKLAKIHGPIMTLKFG-QVTTVVVSSASMAKAILQNHDSSFCNRMVP---DAACSYN----HQEIGMVWLP 127 (278)
Q Consensus 56 ~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~---~~~~~~~----~~g~~~~~~~ 127 (278)
+..+++..+.+|+++ |||++++++ |.+.++++||+.+++++.++ .|++++.. ....... ..+.++++.+
T Consensus 27 ~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 103 (417)
T 3tyw_A 27 CPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTD 103 (417)
T ss_dssp STTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCC
T ss_pred cccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcC
Confidence 357899999999988 999999986 58999999999999999764 56554321 1111100 1356777766
Q ss_pred CCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCccHH
Q 039787 128 VSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPTAR 206 (278)
Q Consensus 128 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~ 206 (278)
|+.|+++|++++ ++|+.++++.+.+.+.++++++++.|.+ .+.++|+.+.+ ..+++++++.+ ||.+..+. +
T Consensus 104 -g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~--~ 175 (417)
T 3tyw_A 104 -APEHTRYRRMLL-PAFTVRRVRAMRPAVQARVDEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LGIPRHDL--E 175 (417)
T ss_dssp -HHHHHHHHHHHG-GGGCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT--T
T ss_pred -CcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH--H
Confidence 999999999999 9999999999999999999999999975 46679999987 58999999997 99987432 3
Q ss_pred HHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 207 EFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.+......+.... + ..++..++.+.+.+++.++|++++++
T Consensus 176 ~~~~~~~~~~~~~---------~---------~~~~~~~~~~~l~~~~~~~i~~r~~~ 215 (417)
T 3tyw_A 176 FFRDVTRISGSRN---------S---------TAEQVSEALGGLFGLLGGLVAERREE 215 (417)
T ss_dssp HHHHHHHHHHSSS---------S---------CTTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhccc---------C---------CHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 4444333322210 0 12345667788899999999988764
No 45
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.81 E-value=4e-18 Score=138.69 Aligned_cols=185 Identities=16% Similarity=0.175 Sum_probs=137.9
Q ss_pred CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhh----hhcccCcccccccCCCchH
Q 039787 57 GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA----CSYNHQEIGMVWLPVSTPW 132 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~g~~w 132 (278)
..+++..+.++ ++||||+++++++.+.++++||+.+++++.++ ..|++++..... ......+.++++.+ |+.|
T Consensus 12 ~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h 88 (404)
T 3ejb_B 12 LKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQN-QPDH 88 (404)
T ss_dssp HHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGCC-TTHH
T ss_pred ccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhcC-CchH
Confidence 46788889888 58999999999999999999999999999765 566666532111 00111246676666 9999
Q ss_pred HHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHH-HHHHHHHHHHHHHhcccccCccHHHHHHH
Q 039787 133 KNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQA-VFNTSLNVLSNTIFSVDLVDPTAREFKDI 211 (278)
Q Consensus 133 ~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 211 (278)
+++|++++ ++|+.+.++.+.+.+.++++++++.|. .++.+|+... ...+++++++.+ ||.+.. +.+.+.+.
T Consensus 89 ~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~--~~~~~~~~ 160 (404)
T 3ejb_B 89 RRLRTLAS-GAFTPRTTESYQPYIIETVHHLLDQVQ----GKKKMEVISDFAFPLASFVIANI-IGVPEE--DREQLKEW 160 (404)
T ss_dssp HHHHHHHH-GGGSHHHHHTTHHHHHHHHHHHHHTTT----TTSEEEHHHHTHHHHHHHHHHHH-HTCCGG--GHHHHHHH
T ss_pred HHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhh----hcCCcchHHHHHHHHHHHHHHHH-cCCCHH--HHHHHHHH
Confidence 99999999 999999999999999999999999986 3567898655 456999999995 898763 23455555
Q ss_pred HHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 212 VWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 212 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
...+...... |+ .....++..++.+.+.+++.++|+++++.
T Consensus 161 ~~~~~~~~~~-------p~-----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 201 (404)
T 3ejb_B 161 AASLIQTIDF-------TR-----SRKALTEGNIMAVQAMAYFKELIQKRKRH 201 (404)
T ss_dssp HHHHHGGGST-------TC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhccC-------CC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5444333221 21 12235666788889999999999988864
No 46
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.80 E-value=1.4e-18 Score=143.17 Aligned_cols=192 Identities=14% Similarity=0.059 Sum_probs=136.2
Q ss_pred chHHHHHHHHHhCCce--EEe-ccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhc-------------ccCcccc
Q 039787 60 PHKSLAKLAKIHGPIM--TLK-FGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSY-------------NHQEIGM 123 (278)
Q Consensus 60 ~~~~~~~~~~~yG~i~--~~~-~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~-------------~~~g~~~ 123 (278)
++..+.++ ++||||+ ++. +++.+.+++++++.+++++.+. ..|++++........ ...+.++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 77788888 6789999 887 6778999999999999999654 667776543221100 0123466
Q ss_pred cccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccC
Q 039787 124 VWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVD 202 (278)
Q Consensus 124 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~ 202 (278)
+..+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ .++++|+.+.+ ..+++++|+.+ ||.+.
T Consensus 125 ~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~dl~~~~~~~~~~~vi~~l-~G~~~-- 196 (450)
T 3tkt_A 125 VQMD-APKHPKLRRLTQ-DWFMPKNLARLDGEIRKIANEAIDRMLG---AGEEGDFMALVAAPYPLHVVMQI-LGVPP-- 196 (450)
T ss_dssp GGCC-TTHHHHHHHHHH-TTTSHHHHGGGHHHHHHHHHHHHHHHHH---TCSEEEHHHHTTTHHHHHHHHHH-TTCCG--
T ss_pred ccCC-CHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEeeHHHHHHHHHHHHHHHH-cCCCh--
Confidence 6665 999999999999 9999999999999999999999999974 36789998887 69999999996 99875
Q ss_pred ccHHHHHHHHHHHHHHhCCCcccccccccccc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 203 PTAREFKDIVWGIMTELGKPNLSDNFPLLKKL-DLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
++...+.+....+..... ....++..++ ++....++..++.+.+.+++.++|++++++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 256 (450)
T 3tkt_A 197 EDEPKMLFLTQQMFGGQD----EDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP 256 (450)
T ss_dssp GGHHHHHHHHHTTSCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHhcccc----chhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 233445554444332111 1122222222 1233456777888999999999999988753
No 47
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.80 E-value=1.3e-18 Score=141.71 Aligned_cols=183 Identities=19% Similarity=0.255 Sum_probs=134.4
Q ss_pred cCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCc--hhh---hh---hcc--cCccccc
Q 039787 55 ELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMV--PDA---AC---SYN--HQEIGMV 124 (278)
Q Consensus 55 ~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~--~~~---~~---~~~--~~g~~~~ 124 (278)
.+..+++..+.+| ++||||+++++++.+.|+++||+.+++|+.++. +++++. +.. .. .+. ..+.+++
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMF 88 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGG
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccc
Confidence 3467899999999 999999999988899999999999999996532 333321 110 00 000 0134666
Q ss_pred ccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHH-HHHHHHHHHHHhcccccCc
Q 039787 125 WLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVF-NTSLNVLSNTIFSVDLVDP 203 (278)
Q Consensus 125 ~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~-~~~~~vi~~~~fG~~~~~~ 203 (278)
+.+ |+.|+++|++++ ++|+...++.+.+.+.++++++++.|.+. ..++++|+.+.+. .+++|+|+. +||.+..
T Consensus 89 ~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~-- 162 (408)
T 1odo_A 89 TAY-GPNHRKLRRLVA-PAFSARRVDAMRPAVEAMVTGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMGVPQD-- 162 (408)
T ss_dssp GCC-HHHHHHHHHTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHTCCHH--
T ss_pred ccC-ChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhCCCHH--
Confidence 555 999999999999 99999999999999999999999999753 2367899998887 599999996 7999753
Q ss_pred cHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 204 TAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+.+++...+..++... . . .++..++.+.+.+++.++|++++++
T Consensus 163 ~~~~~~~~~~~~~~~~--------------~-~---~~~~~~~~~~~~~~~~~~i~~r~~~ 205 (408)
T 1odo_A 163 RRDGFRALVDGVFDTT--------------L-D---QAEAQANTARLYEVLDQLIAAKRAT 205 (408)
T ss_dssp HHHHHHHHHHHHHCTT--------------C-C---HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhccc--------------C-C---HHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 2234544444333200 0 1 1345567788899999999988764
No 48
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.80 E-value=2.3e-18 Score=140.07 Aligned_cols=180 Identities=15% Similarity=0.142 Sum_probs=136.3
Q ss_pred CCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCch--h----hhh---hc-c----cCcc
Q 039787 56 LGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVP--D----AAC---SY-N----HQEI 121 (278)
Q Consensus 56 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~--~----~~~---~~-~----~~g~ 121 (278)
+..+++..+.++ ++||||+++++++.+.++++||+.+++++.++ .|++++.. . ... .+ . ..+.
T Consensus 12 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (404)
T 1z8o_A 12 FHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT 88 (404)
T ss_dssp GTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS
T ss_pred cccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc
Confidence 356889999999 89999999999899999999999999999764 56666432 1 000 11 0 0246
Q ss_pred cccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccc
Q 039787 122 GMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDL 200 (278)
Q Consensus 122 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~ 200 (278)
++++.+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|. .++++|+.+.+ ..+++++|+.+ ||.+.
T Consensus 89 ~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~~vi~~~-~G~~~ 161 (404)
T 1z8o_A 89 NMGTSD-PPTHTRLRKLVS-QEFTVRRVEAMRPRVEQITAELLDEVG----DSGVVDIVDRFAHPLPIKVICEL-LGVDE 161 (404)
T ss_dssp SGGGCC-TTHHHHHHHHHH-TTSCHHHHHHTHHHHHHHHHHHHHTSC----SSSEEEHHHHTTTHHHHHHHHHH-TTCCG
T ss_pred ccccCC-CcHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhhh----hcCCcchHHHHhHHHHHHHHHHH-hCCCH
Confidence 676665 999999999999 999999999999999999999999886 35689998765 68999999985 99986
Q ss_pred cCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 201 VDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.+ .+.+......++. . . .+. .++..++.+.+.+++.++|++++++
T Consensus 162 ~~--~~~~~~~~~~~~~-~--------~-------~p~-~~~~~~~~~~~~~~~~~~i~~r~~~ 206 (404)
T 1z8o_A 162 KY--RGEFGRWSSEILV-M--------D-------PER-AEQRGQAAREVVNFILDLVERRRTE 206 (404)
T ss_dssp GG--TTTHHHHHHHHHC-C--------C-------GGG-HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HH--HHHHHHHHHHHhc-c--------C-------Chh-HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 32 2345444444332 1 0 111 4556678888999999999988864
No 49
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.80 E-value=1.7e-18 Score=141.25 Aligned_cols=181 Identities=13% Similarity=0.161 Sum_probs=133.3
Q ss_pred CCCCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHhcCCCCCCCCch-hhhhhcc--cCcccccccCCCch
Q 039787 56 LGDKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQNHDSSFCNRMVP-DAACSYN--HQEIGMVWLPVSTP 131 (278)
Q Consensus 56 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~-~~~~~~~--~~g~~~~~~~~g~~ 131 (278)
+..+++..+.++ ++||||+++++ ++.+.++++||+.+++|+.++ .|.+++.. .....+. ..+.++++.+ |+.
T Consensus 35 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~ 110 (417)
T 2y5n_A 35 HGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMD-PPE 110 (417)
T ss_dssp SSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCC-TTH
T ss_pred hccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCC-chH
Confidence 456889999999 89999999997 789999999999999999653 45555432 1111111 1256676665 999
Q ss_pred HHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHH-HHHHHHHHHHHhcccccCccHHHHHH
Q 039787 132 WKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVF-NTSLNVLSNTIFSVDLVDPTAREFKD 210 (278)
Q Consensus 132 w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~-~~~~~vi~~~~fG~~~~~~~~~~~~~ 210 (278)
|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ ++.++|+.+.+. .+++++|+. +||.+..+ .+.+..
T Consensus 111 h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~--~~~~~~ 183 (417)
T 2y5n_A 111 HSRLRRLVV-KAFTARRAESLRPRAREIAHELVDQMAA---TGQPADLVAMFARQLPVRVICE-LLGVPSAD--HDRFTR 183 (417)
T ss_dssp HHHHHHHHH-HHSCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG--HHHHHH
T ss_pred HHHHHHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHH--HHHHHH
Confidence 999999999 9999999999999999999999999973 222799987764 699999998 69998632 234433
Q ss_pred HHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 211 IVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.... +... +. .+ .++..++.+.+.+++.++|+++++.
T Consensus 184 ~~~~----~~~~-----~~------~~--~~~~~~~~~~l~~~~~~~i~~r~~~ 220 (417)
T 2y5n_A 184 WSGA----FLST-----AE------VT--AEEMQEAAEQAYAYMGDLIDRRRKE 220 (417)
T ss_dssp HHHT----TSTT-----CC------CC--HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHH----Hhcc-----cC------CC--HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3222 1110 00 11 2456677888999999999988864
No 50
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.80 E-value=6.5e-18 Score=137.15 Aligned_cols=178 Identities=15% Similarity=0.142 Sum_probs=133.4
Q ss_pred CCCCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHhcCCCCCCCCchhh-hhhcccCccc--ccccCCC--
Q 039787 56 LGDKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQNHDSSFCNRMVPDA-ACSYNHQEIG--MVWLPVS-- 129 (278)
Q Consensus 56 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~g~~--~~~~~~g-- 129 (278)
+..+++.++.++ ++||||+++++ ++.+.++++||+.+++|+.++ .|.+++.... ..... .+.+ +++.+ |
T Consensus 24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~~-g~~ 98 (404)
T 2xbk_A 24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLISD-ADA 98 (404)
T ss_dssp BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCBC-SCH
T ss_pred cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceeeC-CCC
Confidence 356789999999 89999999997 789999999999999999653 4655543321 11111 2455 66655 9
Q ss_pred ----chHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCcc
Q 039787 130 ----TPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPT 204 (278)
Q Consensus 130 ----~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~ 204 (278)
+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ .|.++|+.+.+ ..+++++++. +||.+.. +
T Consensus 99 ~~~~~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~--~ 171 (404)
T 2xbk_A 99 ESGRRQHAETRRLLT-PLFSARRVLEMQPKVEEAADTLLDAFIA---QGPPGDLHGELTVPFALTVLCE-VIGVPPQ--R 171 (404)
T ss_dssp HHHHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSSEEHHHHTHHHHHHHHHHH-HHTCCGG--G
T ss_pred CCCCchHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHH-HhCCCHH--H
Confidence 99999999999 9999999999999999999999999973 45689998766 5699999997 7999863 2
Q ss_pred HHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 205 AREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.+++.+....+.... . .+ +..++.+.+.+++.++|+++++.
T Consensus 172 ~~~~~~~~~~~~~~~--------------~-~p----~~~~~~~~~~~~~~~~i~~r~~~ 212 (404)
T 2xbk_A 172 RAELTTLLAGIAKLD--------------D-RE----GAVRAQDDLFGYVAGLVEHKRAE 212 (404)
T ss_dssp HHHHHHHHHHHTBSS--------------C-HH----HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcc--------------C-cH----HHHHHHHHHHHHHHHHHHHHHhC
Confidence 234444433322100 0 11 45567788999999999988864
No 51
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.79 E-value=3.4e-18 Score=139.24 Aligned_cols=178 Identities=12% Similarity=0.186 Sum_probs=133.5
Q ss_pred CCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhh-----hhcccCcccccccCCCc
Q 039787 56 LGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA-----CSYNHQEIGMVWLPVST 130 (278)
Q Consensus 56 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~~~~g~ 130 (278)
+..+++..+.++ ++||||+++++++.+.++++||+.+++++.++ . |++++..... ......+.++++.+ |+
T Consensus 18 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 93 (411)
T 3a4g_A 18 FWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDP-R-LSKDWRHTLPEDQRADMPATPTPMMILMD-PP 93 (411)
T ss_dssp GTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCT-T-EESCGGGGSCGGGCTTCCSCSSCCGGGCC-TT
T ss_pred hhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCC-C-cccccccccccccccccCcccccccccCC-ch
Confidence 457889999999 89999999999899999999999999999764 2 7766542211 11111356776665 99
Q ss_pred hHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHH-HHHHHHHHHHHHHhcccccCccHHHHH
Q 039787 131 PWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQA-VFNTSLNVLSNTIFSVDLVDPTAREFK 209 (278)
Q Consensus 131 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~ 209 (278)
.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ ++++|+... ...+++++|+.+ ||.+.+ +.+.+.
T Consensus 94 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~--~~~~~~ 165 (411)
T 3a4g_A 94 DHTRLRKLVG-RSFTVRRMNELEPRITEIADGLLAGLPT----DGPVDLMREYAFQIPVQVICEL-LGVPAE--DRDDFS 165 (411)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHSCS----SSCEEHHHHTTTTHHHHHHHHH-HTCCGG--GHHHHH
T ss_pred HHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCccHHHHHHHHhHHHHHHHH-hCCCHH--HHHHHH
Confidence 9999999999 9999999999999999999999999862 357999754 568999999975 999863 234454
Q ss_pred HHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 210 DIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.....++.. .| + ++..++.+.+.+++.++|+++++.
T Consensus 166 ~~~~~~~~~---------~p------~----~~~~~~~~~~~~~~~~~i~~r~~~ 201 (411)
T 3a4g_A 166 AWSSVLVDD---------SP------A----DDKNAAMGKLHGYLSDLLERKRTE 201 (411)
T ss_dssp HHHHHHTTS---------SC------T----TTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhcc---------CC------H----HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 444332211 11 1 134466778889999999988764
No 52
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.79 E-value=5.2e-18 Score=137.70 Aligned_cols=179 Identities=11% Similarity=0.003 Sum_probs=135.5
Q ss_pred CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcccCcccccccCCCchHHHHH
Q 039787 57 GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLR 136 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R 136 (278)
..+++.++.++++ ||||+++. .+.++++||+.+++++.++ ..|++++... .... .+.++++.+ |+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~--~~~~l~~~~-g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQP--ALPMMIDMD-DPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCT-TTEESTTCSS-TTSC--CCSSGGGCC-TTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCc-ccccCccccC-Cccc--ccccccccC-chHHHHHH
Confidence 4678899999987 99999774 3789999999999999653 4677765432 1112 246676665 99999999
Q ss_pred hhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchH-HHHHHHHHHHHHHHHhcccccCccHHHHHHHHHHH
Q 039787 137 KICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIG-QAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGI 215 (278)
Q Consensus 137 ~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~-~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~ 215 (278)
++++ ++|+.+.++.+.+.+.++++++++.|.+ ++++|+. +....+++++|+.+ ||.+.+ +.+++.+....+
T Consensus 88 ~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~--~~~~~~~~~~~~ 159 (398)
T 2xkr_A 88 KLVN-AGFTRKRVKDKEASIAALCDTLIDAVCE----RGECDFVRDLAAPLPMAVIGDM-LGVRPE--QRDMFLRWSDDL 159 (398)
T ss_dssp HHHG-GGSCHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTTTHHHHHHHHHH-HTCCGG--GHHHHHHHHHHH
T ss_pred HHhh-hhhCHHHHHHHHHHHHHHHHHHHHhhhh----cCCccHHHHHHHHHHHHHHHHH-hCCCHH--HHHHHHHHHHHH
Confidence 9999 9999999999999999999999999863 3479998 44568999999999 999863 234566655555
Q ss_pred HHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 216 MTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 216 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
..... |. ++ +...++..++.+.+.+++.++|+++++.
T Consensus 160 ~~~~~--------~~--~~--p~~~~~~~~~~~~~~~~~~~~i~~r~~~ 196 (398)
T 2xkr_A 160 VTFLS--------SH--VS--QEDFQITMDAFAAYNDFTRATIAARRAD 196 (398)
T ss_dssp HHHHT--------SC--CC--HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HhccC--------cc--cc--hhhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44321 11 11 2234566778889999999999998764
No 53
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.79 E-value=1.7e-18 Score=140.63 Aligned_cols=179 Identities=15% Similarity=0.117 Sum_probs=133.6
Q ss_pred CCCCchHHHHHHHHHh--CCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcccCcccccccCCCchHH
Q 039787 56 LGDKPHKSLAKLAKIH--GPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWK 133 (278)
Q Consensus 56 ~~~~~~~~~~~~~~~y--G~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~ 133 (278)
+..+++..+.+|+++| |||+++.+++ +.++++||+.+++++ ++...|.+++...........+.+++.. +|+.|+
T Consensus 17 ~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~-~g~~~~ 93 (398)
T 4fb2_A 17 PDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVI-QNTKAFSNKGVTFPRYETGEFELMMAGQ-DDPVHK 93 (398)
T ss_dssp TTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHH-TCCSSEEGGGCSSSCC----CCCTTTTC-CTTHHH
T ss_pred hhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHH-hChhhccCCcccccCCCCcccccCcccC-CchHHH
Confidence 4578999999999999 9999999875 589999999999999 4456777665433211111222334444 599999
Q ss_pred HHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHH-HHHHHHHHHHHHHhcccccCccHHHHHHHH
Q 039787 134 NLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQA-VFNTSLNVLSNTIFSVDLVDPTAREFKDIV 212 (278)
Q Consensus 134 ~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~ 212 (278)
++|++++ ++|+.+.++.+.+.+.++++++++.|.+ ++.+|+... ...+++++++. +||.+.. +.+++.+..
T Consensus 94 ~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~--~~~~~~~~~ 165 (398)
T 4fb2_A 94 KYRQLVA-KPFSPEATDLFTEQLRQSTNDLIDARIE----LGEGDAATWLANEIPARLTAI-LLGLPPE--DGDTYRRWV 165 (398)
T ss_dssp HHHHHHH-TTTCHHHHHTTHHHHHHHHHHHHHTTTT----TTEEEHCCCCCTTHHHHHHHH-HTTSCGG--GHHHHHHHH
T ss_pred HHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHH--HHHHHHHHH
Confidence 9999999 9999999999999999999999999863 345786544 46899999999 6998752 334555555
Q ss_pred HHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 213 WGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 213 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
..++.. .. .++..++.+.+.+++.++|++++++
T Consensus 166 ~~~~~~-----------------~~--~~~~~~~~~~~~~~~~~~i~~r~~~ 198 (398)
T 4fb2_A 166 WAITHV-----------------EN--PEEGAEIFAELVAHARTLIAERRTN 198 (398)
T ss_dssp HHHHHC-----------------CC--HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhcC-----------------CC--HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 544431 00 1255677788999999999998874
No 54
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.78 E-value=3e-19 Score=148.38 Aligned_cols=155 Identities=15% Similarity=0.170 Sum_probs=117.6
Q ss_pred CCCCCCCCCC-CCeeeccccCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCch-hhhh
Q 039787 37 SEQQPPGPTP-YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVP-DAAC 114 (278)
Q Consensus 37 ~~~~~pgp~~-~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~-~~~~ 114 (278)
..+.||||++ +|++||++.+..+++.++.+++++|||||++++++.+.++++||+.+++++.++. .+..++.. ....
T Consensus 16 ~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~-~~~~~~~~~~~~~ 94 (475)
T 3b98_A 16 RRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVA-SLDQTSYAQVLMK 94 (475)
T ss_dssp CTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTT-TEESHHHHHHHHH
T ss_pred CCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCcc-cCCchHHHHHHHH
Confidence 3568999998 9999999888678899999999999999999999999999999999999996543 23322211 1111
Q ss_pred hcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhc--cCCCccchHHHHHHHHHHHHH
Q 039787 115 SYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENC--RVGQAIVIGQAVFNTSLNVLS 192 (278)
Q Consensus 115 ~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~--~~~~~vd~~~~~~~~~~~vi~ 192 (278)
.. .|.+++..+ |+.| |+++. ++|+.+.++.+.+.+.+++.++++.+.... .....+++...+..+++++++
T Consensus 95 ~~--~g~~~~~~~-~~~~---R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (475)
T 3b98_A 95 RI--FNMILPSHN-PESE---KKRAE-MHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGY 167 (475)
T ss_dssp HT--TCCCCTTCC-HHHH---HHHHH-HHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHH
T ss_pred HH--hCCCCCCCC-hHHH---HHHHH-HHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhh
Confidence 12 245565554 6655 57777 899999999999999999998888764211 122357888888999999999
Q ss_pred HHHhccc
Q 039787 193 NTIFSVD 199 (278)
Q Consensus 193 ~~~fG~~ 199 (278)
...||.+
T Consensus 168 ~~~~g~~ 174 (475)
T 3b98_A 168 LTVFGAE 174 (475)
T ss_dssp HHHHCCT
T ss_pred hheeCCc
Confidence 8889965
No 55
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.78 E-value=3.4e-18 Score=139.67 Aligned_cols=186 Identities=14% Similarity=0.227 Sum_probs=137.7
Q ss_pred CCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCc-----hh-h--hhhcccC-ccccccc
Q 039787 56 LGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMV-----PD-A--ACSYNHQ-EIGMVWL 126 (278)
Q Consensus 56 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~-----~~-~--~~~~~~~-g~~~~~~ 126 (278)
+..+++..+.++ ++||||++ + ++.+.++++||+.+++++.++ . |++++. .. . ...+... +.++++.
T Consensus 24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~-~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 98 (419)
T 1q5d_A 24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDE-R-FAVSREEWESSAEYSSAIPELSDMKKYGLFGL 98 (419)
T ss_dssp TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCT-T-EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTS
T ss_pred hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCC-C-ccccccccccccccccccchhhhhcccccccC
Confidence 356889999999 78999999 5 677899999999999999765 3 777752 11 1 1111101 4566666
Q ss_pred CCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHH-HHHHHHHHHHHHHhcccccCccH
Q 039787 127 PVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQA-VFNTSLNVLSNTIFSVDLVDPTA 205 (278)
Q Consensus 127 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~-~~~~~~~vi~~~~fG~~~~~~~~ 205 (278)
+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ ++++|+... ...+++|+|+.+ ||.+.+ +.
T Consensus 99 ~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~--~~ 169 (419)
T 1q5d_A 99 P-PEDHARVRKLVN-PSFTSRAIDLLRAEIQRTVDQLLDARSG----QEEFDVVRDYAEGIPMRAISAL-LKVPAE--CD 169 (419)
T ss_dssp C-HHHHHHHHHHHG-GGGSHHHHGGGHHHHHHHHHHHHHHHTT----SSCEETTTTTGGGSHHHHHHHH-TTCCGG--GH
T ss_pred C-chHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH-hCCCHH--HH
Confidence 5 999999999999 9999999999999999999999999963 237998754 489999999998 999863 23
Q ss_pred HHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 206 REFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+.+......+...... ..+|+. + ...++..++.+.+.+++.++|++++++
T Consensus 170 ~~~~~~~~~~~~~~~~----~~~P~~----~-~~~~~~~~~~~~~~~~~~~~i~~r~~~ 219 (419)
T 1q5d_A 170 EKFRRFGSATARALGV----GLVPRV----D-EETKTLVASVTEGLALLHGVLDERRRN 219 (419)
T ss_dssp HHHHHHHHHHHHHTTT----TTSSCC----C-SCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhccc----ccccCC----h-HHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4566665555553321 123322 1 123566778889999999999988764
No 56
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.77 E-value=1.2e-17 Score=136.19 Aligned_cols=192 Identities=15% Similarity=0.148 Sum_probs=136.3
Q ss_pred CCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhh-----
Q 039787 40 QPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA----- 113 (278)
Q Consensus 40 ~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~----- 113 (278)
-.+||.. |+- ..+..+++..+.+|+ +||||+++++ ++.+.++++||+.+++++.+ ..|.+++.....
T Consensus 8 ~~~g~~~-~~~---~~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~ 80 (413)
T 2z36_A 8 ELAGLEL-PVE---RGCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLAD--GRFSSDKRKDGFPLFTL 80 (413)
T ss_dssp --CCCEE-CCC---CCBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHC--TTEECCTTSTTCCCSSC
T ss_pred HhccccC-CCC---cccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcC--CCcccCccccCcccccc
Confidence 3466642 331 234568899999997 7899999997 78999999999999999975 356665432111
Q ss_pred -hhccc---Cccc-ccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHH-HHH
Q 039787 114 -CSYNH---QEIG-MVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVF-NTS 187 (278)
Q Consensus 114 -~~~~~---~g~~-~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~-~~~ 187 (278)
..... .+.+ +++.+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ ..++++|+.+.+. .++
T Consensus 81 ~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~~~d~~~~~~~~~~ 156 (413)
T 2z36_A 81 DAATLQQLRSQPPLMLGMD-GAEHSAARRPVI-GEFTVKRLAALRPRIQDIVDHFIDDMLA--TDQRPVDLVQALSLPVP 156 (413)
T ss_dssp CHHHHHHHTTSCCCGGGCC-HHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTT--CSCSSEEHHHHTTTHHH
T ss_pred ccccccccccccccccccC-chHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCccHHHHHhhhhH
Confidence 01100 2566 66665 999999999999 9999999999999999999999999963 1366899986665 699
Q ss_pred HHHHHHHHhcccccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 188 LNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 188 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+++++.+ ||.+..+ .+.+..... .+.. .. .+ ++..++.+.+.+++.++|++++++
T Consensus 157 ~~vi~~~-~G~~~~~--~~~~~~~~~----~~~~-----------~~-~~---~~~~~~~~~~~~~~~~~i~~r~~~ 211 (413)
T 2z36_A 157 SLVICEL-LGVPYTD--HDFFQSRTT----MMVS-----------RT-SM---EDRRRAFAELRAYIDDLITRKESE 211 (413)
T ss_dssp HHHHHHH-HTCCGGG--HHHHHHHHH----HTTC-----------SS-CH---HHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHH-hCCCHHH--HHHHHHHHH----HHhc-----------cc-Cc---HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999995 9997632 233433322 1111 00 11 455677788899999999988754
No 57
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.77 E-value=1.3e-17 Score=136.34 Aligned_cols=185 Identities=12% Similarity=0.038 Sum_probs=132.0
Q ss_pred CCCchHHHHHHHHHhCCceEEecc--CeeEEEecCHHHHHHHHHhcCCCCCCCCch--------h-hhh-----hcccCc
Q 039787 57 GDKPHKSLAKLAKIHGPIMTLKFG--QVTTVVVSSASMAKAILQNHDSSFCNRMVP--------D-AAC-----SYNHQE 120 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG~i~~~~~~--~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~--------~-~~~-----~~~~~g 120 (278)
..+++.++.+++ +||||+++++| +.+.++++||+.+++|+.++ .|++++.. . ... .....+
T Consensus 19 ~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 357888898986 59999999987 78899999999999999763 67766531 1 000 001113
Q ss_pred ccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhccc
Q 039787 121 IGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVD 199 (278)
Q Consensus 121 ~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~ 199 (278)
.++++.+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ . +++|+.+.+ ..+++++|+.+ ||.+
T Consensus 96 ~~l~~~d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~-g~~dl~~~~~~~~~~~vi~~~-~G~~ 168 (425)
T 2z3t_A 96 NWLVFLD-PPHHTELRSLLT-TEFSPSIVTGLRPRIAELASALLDRLRA---Q-RRPDLVEGFAAPLPILVISAL-LGIP 168 (425)
T ss_dssp TCGGGCC-HHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTT---S-SSCBHHHHTTTHHHHHHHHHH-HTCC
T ss_pred cccccCC-chHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh---c-CCccHHHHHHHHHHHHHHHHH-hCCC
Confidence 6777776 999999999999 9999999999999999999999999963 2 379998754 78999999998 9998
Q ss_pred ccCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 200 LVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.. +.+++.+....+.... ..+| + .+...++..++.+.+.+++.++|++++++
T Consensus 169 ~~--~~~~~~~~~~~~~~~~------~~~~----~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 220 (425)
T 2z3t_A 169 EE--DHTWLRANAVALQEAS------TTRA----R-DGRGYARAEAASQEFTRYFRREVDRRGGD 220 (425)
T ss_dssp GG--GHHHHHHHHHHHHTTC------TTCC----C----HHHHHHHHHHHHHHHHHHHHCC----
T ss_pred HH--HHHHHHHHHHHHHhhc------cccC----C-CHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 63 2345555444443211 1112 1 11224566778888999999999877653
No 58
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.77 E-value=9.9e-18 Score=136.99 Aligned_cols=186 Identities=16% Similarity=0.182 Sum_probs=134.0
Q ss_pred CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcc--------cCcccccccCC
Q 039787 57 GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYN--------HQEIGMVWLPV 128 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~ 128 (278)
..+++.++.++ ++||||+++.+| .++++||+.+++++.+ ...+++++......... ..+.++++.+
T Consensus 28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d- 101 (418)
T 3r9b_A 28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRH-PSSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD- 101 (418)
T ss_dssp TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHC-TTEECCGGGCHHHHHHHC---------CCCGGGCC-
T ss_pred ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcC-cccccCcccccccccccccccccccccccchhhcC-
Confidence 57899999988 578999998765 8999999999999965 34444444322221111 1245677776
Q ss_pred CchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCccHHH
Q 039787 129 STPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPTARE 207 (278)
Q Consensus 129 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~ 207 (278)
|+.|+++|++++ ++|+.+.++.+.+.+.++++++++ +. .++.+|+...+ ..+++++++. +||.+..+ .+.
T Consensus 102 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~-l~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~~ 172 (418)
T 3r9b_A 102 PPDHTRLRGLVS-KAFAPRVIKRLEPEITALVDQLLD-AV----DGPEFNLIDNLAYPLPVAVICR-LLGVPIED--EPK 172 (418)
T ss_dssp TTHHHHHHHHHH-GGGSHHHHGGGHHHHHHHHHHHHH-TC----CSSEEEHHHHTTTHHHHHHHHH-HHTCCGGG--HHH
T ss_pred CchHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHh-hh----ccCCeehHHHHhCcCCHHHHHH-HcCCCHHH--HHH
Confidence 999999999999 999999999999999999999999 75 34578976555 6899999999 89998632 345
Q ss_pred HHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 208 FKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+......+...... .+++.++ .....++..++.+.+.+++.++|++++++
T Consensus 173 ~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~r~~~ 222 (418)
T 3r9b_A 173 FSRASALLAAALDP------FLALTGE-TSDLFDEQMKAGMWLRDYLRALIDERRRT 222 (418)
T ss_dssp HHHHHHHHHHTTSC------HHHHHSS-CCTTHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHhhcCc------ccccccc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55555544433221 1111122 12335677788899999999999988764
No 59
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.77 E-value=1.3e-17 Score=135.77 Aligned_cols=181 Identities=12% Similarity=0.189 Sum_probs=133.9
Q ss_pred cCCCCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHhcCCCCCCCC-chhhhh--hccc--------C-cc
Q 039787 55 ELGDKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQNHDSSFCNRM-VPDAAC--SYNH--------Q-EI 121 (278)
Q Consensus 55 ~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~~~~~~~~~~-~~~~~~--~~~~--------~-g~ 121 (278)
.+..+++..+.++ ++||||+++++ ++.+.++++||+.+++++.++. +.+++ ...... .... . +.
T Consensus 14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (411)
T 1gwi_A 14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGR 90 (411)
T ss_dssp TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccc
Confidence 3457889999999 99999999997 8899999999999999996542 33433 111100 0000 1 34
Q ss_pred cccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHH-HHHHHHHHHHHhcccc
Q 039787 122 GMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVF-NTSLNVLSNTIFSVDL 200 (278)
Q Consensus 122 ~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~-~~~~~vi~~~~fG~~~ 200 (278)
++++.+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ .++++|+.+.+. .+++++++. +||.+.
T Consensus 91 ~l~~~~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~ 164 (411)
T 1gwi_A 91 SMLTVD-GAEHRRLRTLVA-QALTVRRVEHMRGRITELTDRLLDELPA---DGGVVDLKAAFAYPLPMYVVAD-LMGIEE 164 (411)
T ss_dssp SGGGCC-HHHHHHHHHHHT-TTSCHHHHHTTHHHHHHHHHHHHHTSCC---SCCCEEHHHHTTTHHHHHHHHH-HHTCCG
T ss_pred ccccCC-cHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHH---cCCCcchHHHHhhHHHHHHHHH-HhCCCH
Confidence 666555 999999999999 9999999999999999999999999862 356899998886 599999996 799986
Q ss_pred cCccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 201 VDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+ +.+++......++... . . .++..++.+.+.+++.++|++++++
T Consensus 165 ~--~~~~~~~~~~~~~~~~--------------~-~---~~~~~~~~~~~~~~~~~~i~~r~~~ 208 (411)
T 1gwi_A 165 A--RLPRLKVLFEKFFSTQ--------------T-P---PEEVVATLTELASIMTDTVAAKRAA 208 (411)
T ss_dssp G--GHHHHHHHHHHHHCTT--------------S-C---HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred H--HHHHHHHHHHHHhccC--------------C-C---hHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3 2345555544433210 0 1 1345567788999999999988764
No 60
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.77 E-value=7.3e-18 Score=137.22 Aligned_cols=179 Identities=12% Similarity=0.118 Sum_probs=130.3
Q ss_pred CCCchHHHHHHHHHhCCceEEeccC--eeEEEecCHHHHHHHHHhcCCCCCCCCchhh----hhhcccC-cccccccCCC
Q 039787 57 GDKPHKSLAKLAKIHGPIMTLKFGQ--VTTVVVSSASMAKAILQNHDSSFCNRMVPDA----ACSYNHQ-EIGMVWLPVS 129 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG~i~~~~~~~--~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~-g~~~~~~~~g 129 (278)
+++++..+.+++ +||||+++.+++ .+.+++++|+.+++|+.+ ..|.+++.... ....... +.++++.+ |
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLAFAD-Q 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCSTTCC-T
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhccccccccCC-c
Confidence 566778999887 799999998754 789999999999999965 35665543211 1111111 46676665 9
Q ss_pred chHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHH-HHHHHHHHHHHhcccccCccHHHH
Q 039787 130 TPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVF-NTSLNVLSNTIFSVDLVDPTAREF 208 (278)
Q Consensus 130 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~-~~~~~vi~~~~fG~~~~~~~~~~~ 208 (278)
+.|+++|++++ ++|+.++++.+.+.+.+.++++++.|.+ .|.++|+.+.+. .+++++|+. +||.+.. +.+++
T Consensus 102 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~--~~~~~ 174 (411)
T 2dkk_A 102 PDHNRLRRAVA-GAFTVGATKRLRPRAQEILDGLVDGILA---EGPPADLVERVLEPFPIAVVSE-VMGVPAA--DRERV 174 (411)
T ss_dssp THHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCSS--HHHHH
T ss_pred hHHHHHHHHhh-HhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHH--HHHHH
Confidence 99999999999 9999999999999999999999999974 355799997776 699999998 5999863 22333
Q ss_pred HHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 209 KDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.. ....+.. ..+ ..++..++.+.+.+++.++|++++++
T Consensus 175 ~~----~~~~~~~-----~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~ 212 (411)
T 2dkk_A 175 HS----WTRQIIS-----TSG---------GAEAAERAKRGLYGWITETVRARAGS 212 (411)
T ss_dssp HH----HHGGGCS-----SCS---------CSHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred HH----HHHHHHh-----ccc---------hHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 32 2222211 111 12345567788889999999887653
No 61
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.77 E-value=1.2e-17 Score=136.44 Aligned_cols=184 Identities=11% Similarity=0.104 Sum_probs=133.9
Q ss_pred CCCchHHHHHHHHHhC-CceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcccCcccccccCCCchHHHH
Q 039787 57 GDKPHKSLAKLAKIHG-PIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNL 135 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~ 135 (278)
..+++.++.++++++| ||+++..++ +.++++||+.+++|+. +...|++++...........+.+++..+ |+.|+++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~~~d-g~~h~~~ 113 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPREAGEAYDMVPTKLD-PPEHTPY 113 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHHHHHHCCCTTTTCC-TTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCcccccccccCCccCC-cHHHHHH
Confidence 3578889999887655 899998765 4899999999999994 4567777653222111111234555555 9999999
Q ss_pred HhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCccHHHHHHHHHH
Q 039787 136 RKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPTAREFKDIVWG 214 (278)
Q Consensus 136 R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~ 214 (278)
|++++ ++|+.+.++.+.+.+.++++++++.|. .++.+|+...+ ..++.++++. +||.+. ++.+.+.+....
T Consensus 114 R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~~v~~~-~~G~~~--~~~~~~~~~~~~ 185 (421)
T 3lxh_A 114 RKAID-KGLNLAEIRKLEDQIRTIAVEIIEGFA----DRGHCEFGSEFSTVFPVRVFLA-LAGLPV--EDATKLGLLANE 185 (421)
T ss_dssp HHHHH-HHHSHHHHHTTHHHHHHHHHHHHHTTT----TTSEEEHHHHTTTTHHHHHHHH-HHTCCG--GGHHHHHHHHHH
T ss_pred HHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHh----hcCCeehHHHHHHHHHHHHHHH-HcCCCH--HHHHHHHHHHHH
Confidence 99999 999999999999999999999999986 33468875555 6688888886 489875 334556555554
Q ss_pred HHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 215 IMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 215 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
++.... ++ +....++..++.+.+.+++.++|+++++.
T Consensus 186 ~~~~~~------------~~-p~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 222 (421)
T 3lxh_A 186 MTRPSG------------NT-PEEQGRSLEAANKGFFEYVAPIIAARRGG 222 (421)
T ss_dssp HHSCCC------------SS-HHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred Hhcccc------------CC-CchhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 433111 12 22235677788899999999999998865
No 62
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.76 E-value=1.2e-17 Score=136.09 Aligned_cols=179 Identities=15% Similarity=0.107 Sum_probs=131.5
Q ss_pred CCCchHHHHHHHHHhCCce-----EEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchh-hhh--hc-c-cCccccccc
Q 039787 57 GDKPHKSLAKLAKIHGPIM-----TLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPD-AAC--SY-N-HQEIGMVWL 126 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG~i~-----~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~-~~~--~~-~-~~g~~~~~~ 126 (278)
..+++.++.++. +||||+ ++.+ .+.++++||+.+++++.++ ..|++++... ... .+ . ..+.++++.
T Consensus 24 ~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~ 99 (414)
T 2uuq_A 24 WPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQ 99 (414)
T ss_dssp TTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGC
T ss_pred ccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccC
Confidence 367888998885 689999 8765 6789999999999999765 5677765432 111 22 1 235678777
Q ss_pred CCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchH-HHHHHHHHHHHHHHHhcccccCccH
Q 039787 127 PVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIG-QAVFNTSLNVLSNTIFSVDLVDPTA 205 (278)
Q Consensus 127 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~-~~~~~~~~~vi~~~~fG~~~~~~~~ 205 (278)
+ |+.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ . +.+|+. +++..+++++++. +||.+++ +.
T Consensus 100 ~-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~-~~vdl~~~~~~~~~~~vi~~-~~G~~~~--~~ 170 (414)
T 2uuq_A 100 D-PPVHTEFRKLVS-RGFTPRQVETVEPTVRKFVVERLEKLRA---N-GGGDIVTELFKPLPSMVVAH-YLGVPEE--DW 170 (414)
T ss_dssp C-TTHHHHHHHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHH---T-TEEEHHHHTTTHHHHHHHHH-HTTCCGG--GH
T ss_pred C-chhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---c-CCccHHHHHHHHhHHHHHHH-HhCCCHH--HH
Confidence 5 999999999999 9999999999999999999999999974 2 369996 5567999999999 6999874 23
Q ss_pred HHHHHHHHHHHHHhCCCcccccc-ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 206 REFKDIVWGIMTELGKPNLSDNF-PLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~-p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+++......+.... .+ |. . ++..++.+.+.+++.++|++++++
T Consensus 171 ~~~~~~~~~~~~~~-------~~~p~------~---~~~~~~~~~~~~~~~~~i~~r~~~ 214 (414)
T 2uuq_A 171 TQFDGWTQAIVAAN-------AVDGA------T---TGALDAVGSMMAYFTGLIERRRTE 214 (414)
T ss_dssp HHHHHHHHHHHHHH-------HC--------------CCHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhhc-------ccCCc------h---hHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44555444443320 11 21 0 123456677888999999888764
No 63
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.76 E-value=4e-17 Score=132.42 Aligned_cols=180 Identities=14% Similarity=0.104 Sum_probs=131.6
Q ss_pred CCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhh------hcccC-cccccccCCCc
Q 039787 58 DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAAC------SYNHQ-EIGMVWLPVST 130 (278)
Q Consensus 58 ~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~-g~~~~~~~~g~ 130 (278)
.+++.++.++ ++||||++ + |.+.++++||+.+++++.+ ..|.+++...... ..... +.++++.+ |+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQD-EP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCC-TT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccCC-ch
Confidence 4678888777 58999998 6 5789999999999999964 3565543221000 11111 45677665 99
Q ss_pred hHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHH-HHHHHHHHHHHHHhcccccCccHHHHH
Q 039787 131 PWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQA-VFNTSLNVLSNTIFSVDLVDPTAREFK 209 (278)
Q Consensus 131 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~ 209 (278)
.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ ++++|+... ...+++++++.+ ||.+.++ .+.+.
T Consensus 86 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~--~~~~~ 157 (397)
T 3buj_A 86 DHGRLRGVVG-PAFSPSALRRLEPVIAGTVDDLLRPALA----RGAMDVVDELAYPLALRAVLGL-LGLPAAD--WGAVG 157 (397)
T ss_dssp HHHHHHHHHG-GGSSTTTTGGGHHHHHHHHHHHHHHHHT----TTEEEHHHHTHHHHHHHHHHHH-HTCCGGG--HHHHH
T ss_pred hHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHhh----cCCeehHHHHHHHhHHHHHHHH-hCCCHHH--HHHHH
Confidence 9999999999 9999999999999999999999999972 457998754 578999999999 9998632 34555
Q ss_pred HHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 210 DIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.....+..... + .+ .+...++..++.+.+.+++.++|+++++.
T Consensus 158 ~~~~~~~~~~~---------~--~~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 200 (397)
T 3buj_A 158 RWSRDVGRTLD---------R--GA-SAEDMRRGHAAIAEFADYVERALARRRRE 200 (397)
T ss_dssp HHHHHHHGGGC---------S--SC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcC---------C--CC-ChHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 55544443221 1 01 12234566778889999999999988764
No 64
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.74 E-value=2.2e-17 Score=134.00 Aligned_cols=175 Identities=14% Similarity=0.143 Sum_probs=124.2
Q ss_pred hHHHHHHHHHhCCceEEecc-Ce---eEEEecCHHHHHHHHHhcCCCCCCCCc------h---hhhhhcccCcccccccC
Q 039787 61 HKSLAKLAKIHGPIMTLKFG-QV---TTVVVSSASMAKAILQNHDSSFCNRMV------P---DAACSYNHQEIGMVWLP 127 (278)
Q Consensus 61 ~~~~~~~~~~yG~i~~~~~~-~~---~~v~i~dp~~~~~i~~~~~~~~~~~~~------~---~~~~~~~~~g~~~~~~~ 127 (278)
+..+.+|+++ |||+++.++ |. +.|+++||+.+++++.++ ..|++++. . ...... ..+.++++.+
T Consensus 16 ~~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~ 92 (398)
T 1lfk_A 16 LDPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPR-ELVGNLMDYD 92 (398)
T ss_dssp TEECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC--------------CCTTCGGGCC
T ss_pred CChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCccccccc-ccccCccccC
Confidence 3345567776 999999875 55 899999999999999433 34655543 1 111111 1246777765
Q ss_pred CCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHH-HHHHHHHHHHhcccccCccHH
Q 039787 128 VSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFN-TSLNVLSNTIFSVDLVDPTAR 206 (278)
Q Consensus 128 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~-~~~~vi~~~~fG~~~~~~~~~ 206 (278)
|+.|+++|++++ ++|+.++++.+.+.+.++++++++.|.+ .++++|+.+.+.. +++++++. +||.+..+ .+
T Consensus 93 -g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--~~ 164 (398)
T 1lfk_A 93 -PPEHTRLRRKLT-PGFTLRKMQRMAPYIEQIVNDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVGVPRDD--RD 164 (398)
T ss_dssp -TTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG--HH
T ss_pred -CHHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH--HH
Confidence 999999999999 9999999999999999999999999963 3567999999987 99999998 59998632 23
Q ss_pred HHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 207 EFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.+.+....++. .+...++..++.+.+.+++.++|+++++.
T Consensus 165 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 204 (398)
T 1lfk_A 165 MFMKLCHGHLD------------------ASLSQKRRAALGDKFSRYLLAMIARERKE 204 (398)
T ss_dssp HHHHHHHHTTC------------------TTSCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHh------------------cccchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44443332211 01113456677888999999999988864
No 65
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.74 E-value=1e-17 Score=136.45 Aligned_cols=182 Identities=16% Similarity=0.112 Sum_probs=131.0
Q ss_pred CCCchHHHHHHHHHhCCceEEeccC--eeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhc---ccC-cccccccCCCc
Q 039787 57 GDKPHKSLAKLAKIHGPIMTLKFGQ--VTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSY---NHQ-EIGMVWLPVST 130 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG~i~~~~~~~--~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~-g~~~~~~~~g~ 130 (278)
.++++..+.++++ ||||+++...| .+.+++++++.+++++.+ ...|++++........ ... +.+++..+ |+
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~d-g~ 112 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAP-SAPLTSEYGMMIGFDRDHPDNSGGRMMVVSE-HE 112 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCT-TSSEECTTCSSTTCCSSSCCTTTTTSGGGCC-HH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhC-hhhhcCCccccccccccccccccCCCccccC-cH
Confidence 3578999999976 99999996445 789999999999999944 4567766543322111 111 34555555 99
Q ss_pred hHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCccHHHHH
Q 039787 131 PWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPTAREFK 209 (278)
Q Consensus 131 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~ 209 (278)
.|+++|++++ ++|+.+.++.+.+.+.++++++++.|.+ ++++|+.+.+ ..+++++|+. +||.+. ++.+.+.
T Consensus 113 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~--~~~~~~~ 184 (415)
T 3mgx_A 113 QHRKLRKLVG-PLLSRAAARKLAERVRIEVGDVLGRVLD----GEVCDAATAIGPRIPAAVVCE-ILGVPA--EDEDMLI 184 (415)
T ss_dssp HHHHHHHHHG-GGSSHHHHHHSHHHHHHHHHHHTTTSSS----SSCEESTTTTTTHHHHHHHHH-HHTCCG--GGHHHHH
T ss_pred HHHHHHHHhH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCcchHHHHHHHHHHHHHHH-HcCCCH--HHHHHHH
Confidence 9999999999 9999999999999999999999998862 3479998877 6799999998 589764 3345555
Q ss_pred HHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 210 DIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
+....+...... ...| . . ..++.+.+.+++.++|++++++
T Consensus 185 ~~~~~~~~~~~~----~~~~------~-~----~~~~~~~l~~~~~~~i~~rr~~ 224 (415)
T 3mgx_A 185 DLTNHAFGGEDE----LFDG------M-T----PRQAHTEILVYFDELITARRKE 224 (415)
T ss_dssp HHHHHHTSCCC--------C------C-C----HHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHcccCc----ccch------H-H----HHHHHHHHHHHHHHHHHHHHhC
Confidence 555544332110 0011 1 1 1256788899999999998865
No 66
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.73 E-value=1.3e-17 Score=137.03 Aligned_cols=183 Identities=13% Similarity=0.101 Sum_probs=125.1
Q ss_pred CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcccCcccccccCCCchHHHHH
Q 039787 57 GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLR 136 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R 136 (278)
..+++.++.++ ++||||+++..++ .+++++|+.+++|+.++. .|++++......... ++.++++.+ |+.|+++|
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~-~~~~l~~~d-g~~h~~~R 125 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVM-RGPVLAQMH-GKEHSAKR 125 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSC-C--------------CCH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-ccccccccccccccc-CCCccccCC-cHHHHHHH
Confidence 35777888776 6899999987655 899999999999997653 477665443322222 122455555 99999999
Q ss_pred hhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchH-HHHHHHHHHHHHHHHhcccccCccHHHHHHHHHHH
Q 039787 137 KICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIG-QAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGI 215 (278)
Q Consensus 137 ~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~-~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~ 215 (278)
++++ ++|+.+.++.+.+.+.++++++++.|. .++.+|+. +....+++++++. +||.+.. +.+++.+....+
T Consensus 126 r~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~--~~~~~~~~~~~~ 197 (441)
T 3nc3_A 126 RIVV-RSFIGDALDHLSPLIKQNAENLLAPYL----ERGKSDLVNDFGKTFAVCVTMD-MLGLDKR--DHEKISEWHSGV 197 (441)
T ss_dssp HHHH-HHHHHTHHHHHHHHHHHHHHHHHTTTT----TTTEEECCCCCHHHHHHHHHHH-HTTCCGG--GHHHHHHHHHHH
T ss_pred HHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHH----hcCCCcHHHHHHHHHHHHHHHH-HcCCCHH--HHHHHHHHHHHH
Confidence 9999 999999999999999999999999986 34568864 4555799999999 5898763 335566666655
Q ss_pred HHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 216 MTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 216 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
....... .. .....+...++.+.+.+++.++|++++++
T Consensus 198 ~~~~~~~---------~~--~~~~~~~~~~~~~~l~~~~~~~i~~rr~~ 235 (441)
T 3nc3_A 198 ADFITSI---------SQ--SPEARAHSLWCSEQLSQYLMPVIKERRVN 235 (441)
T ss_dssp HHHHHCS---------CC--CHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHhcccc---------cC--ChHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5543211 00 12224556678889999999999998764
No 67
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.71 E-value=4.7e-17 Score=132.05 Aligned_cols=178 Identities=8% Similarity=0.020 Sum_probs=128.8
Q ss_pred CCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcccCcccccccCCCchHHHH
Q 039787 56 LGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNL 135 (278)
Q Consensus 56 ~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~ 135 (278)
+..+++.++.+|+++ |||+++..++ +.++++||+.+++++.+ ...|++++...........+.+++..+ |+.|+++
T Consensus 22 ~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~h~~~ 97 (396)
T 3oft_A 22 VEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGD-AERLSSQCLAVTPGLGKVMQFIPLQQD-GAEHKAF 97 (396)
T ss_dssp TTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHC-TTTEESTTCCSSTTHHHHHCCTTTTCC-HHHHHHH
T ss_pred hhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcC-cccccCCcccCCCccccccccCccccC-CcHHHHH
Confidence 357899999999998 9999998764 48889999999999955 456776653221111111123444454 9999999
Q ss_pred HhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCccHHHHHHHHHH
Q 039787 136 RKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPTAREFKDIVWG 214 (278)
Q Consensus 136 R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~ 214 (278)
|++++ ++|+.+.++.+.+.+.++++++++.|.+ ++.+|+...+ ..++.++++. +||.+. ++...+......
T Consensus 98 R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~--~~~~~~~~~~~~ 169 (396)
T 3oft_A 98 RTPVM-KGLASRFVVALEPKVQAVARKLMESLRP----RGSCDFVSDFAEILPLNIFLT-LIDVPL--EDRPRLRQLGVQ 169 (396)
T ss_dssp HHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHGG----GSEEEHHHHTTTTHHHHHHHH-HTTCCG--GGHHHHHHHHHH
T ss_pred HHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh----cCCccHHHHHHHHHHHHHHHH-HcCCCH--HHHHHHHHHHHH
Confidence 99999 9999999999999999999999999963 3468876555 5677888776 689864 333455555444
Q ss_pred HHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 215 IMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 215 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
++.... .++..++.+.+.+++.++|+++++.
T Consensus 170 ~~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~r~~~ 200 (396)
T 3oft_A 170 LTRPDG-------------------SMTVEQLKQAADDYLWPFIEKRMAQ 200 (396)
T ss_dssp HHSCCS-------------------SCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HhCCCC-------------------HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 332110 1233566788899999999998875
No 68
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.68 E-value=1.6e-15 Score=124.08 Aligned_cols=182 Identities=13% Similarity=0.085 Sum_probs=127.4
Q ss_pred CCCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHhcCCCCCCCCc---hhhhh------hcccCccccccc
Q 039787 57 GDKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQNHDSSFCNRMV---PDAAC------SYNHQEIGMVWL 126 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~---~~~~~------~~~~~g~~~~~~ 126 (278)
..+++.++.+++++ |||+++.. ++.+.+++++++.+++++.+. ..|++++. ..... .....+.+++..
T Consensus 37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 114 (426)
T 3rwl_A 37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAM 114 (426)
T ss_dssp TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGC
T ss_pred cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCccccc
Confidence 35688899999875 99999976 467799999999999999664 45655431 11101 011123456665
Q ss_pred CCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCccH
Q 039787 127 PVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPTA 205 (278)
Q Consensus 127 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~ 205 (278)
+ |+.|+++|++++ ++|+.+.++.+.+.+.+.++++++.|. .++++|+...+ ..+++++++. +||.+..+ .
T Consensus 115 d-g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~--~ 185 (426)
T 3rwl_A 115 D-RPRHDEQRKAVS-PIVAPANLAALEGTIRERVSKTLDGLP----VGEEFDWVDRVSIEITTQMLAT-LFDFPFEE--R 185 (426)
T ss_dssp C-TTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHTSC----SSSCEEHHHHTHHHHHHHHHHH-HHTCCGGG--T
T ss_pred C-chHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhh----cCCCcchHHHHHHHHHHHHHHH-HcCCCHHH--H
Confidence 5 999999999999 999999999999999999999999884 46789977766 6889998886 89987522 2
Q ss_pred HHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 039787 206 REFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRL 262 (278)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 262 (278)
+.+...... +... +... .....+...++.+.+.+++.++|++++
T Consensus 186 ~~~~~~~~~----~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~r~ 229 (426)
T 3rwl_A 186 RKLTRWSDV----TTAA------PGGG---VVESWDQRKTELLECAAYFQVLWNERV 229 (426)
T ss_dssp HHHHHHHHH----HTCC------TTSS---SCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----HHhc------cCcc---ccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334333221 1110 0000 111234555677889999999999884
No 69
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.67 E-value=4.3e-16 Score=124.96 Aligned_cols=169 Identities=14% Similarity=0.186 Sum_probs=121.7
Q ss_pred hHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCc-hh-hh-----h-hcccC--cccccccCCCc
Q 039787 61 HKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMV-PD-AA-----C-SYNHQ--EIGMVWLPVST 130 (278)
Q Consensus 61 ~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~-~~-~~-----~-~~~~~--g~~~~~~~~g~ 130 (278)
+..+.++ ++||||+++. | .++++||+.+++++.++ ..|++++. .. .. . .+.+. +.++++.+ |+
T Consensus 2 ~~~~~~l-r~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~ 74 (367)
T 3b4x_A 2 YDWFKQM-RKESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSD-PP 74 (367)
T ss_dssp HHHHHHH-HHHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCC-TT
T ss_pred CHHHHHH-HHcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCC-ch
Confidence 4567777 4799999987 3 79999999999999764 46776642 21 11 1 12110 26777776 99
Q ss_pred hHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCccHHHHH
Q 039787 131 PWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPTAREFK 209 (278)
Q Consensus 131 ~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~ 209 (278)
.|+++|++++ ++|+.+.++. +.+.++++++++.|. | .+|+.+.+ ..+++++|+. +||.+ . +.+++.
T Consensus 75 ~h~~~R~~~~-~~fs~~~l~~--~~i~~~~~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G~~-~--~~~~~~ 141 (367)
T 3b4x_A 75 LHDELRNLTA-DAFNPSNLPV--DFVREVTVKLLSELD-----E-EFDVIESFAIPLPILVISK-MLGIN-P--DVKKVK 141 (367)
T ss_dssp HHHHHHHTTG-GGGSGGGSCH--HHHHHHHHHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHTCC-C--CHHHHH
T ss_pred hHHHHHHHHH-HhcCHhhhcc--hHHHHHHHHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcCCC-C--cHHHHH
Confidence 9999999999 9999999988 999999999998875 3 49998765 7999999999 79998 3 345666
Q ss_pred HHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 210 DIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.....+..... ..|.. .+.. ++.+.+.+++.++|++++++
T Consensus 142 ~~~~~~~~~~~------~~p~~--------~~~~-~~~~~~~~~~~~~i~~r~~~ 181 (367)
T 3b4x_A 142 DWSDLVALRLG------RADEI--------FSIG-RKYLELISFSKKELDSRKGK 181 (367)
T ss_dssp HHHHHHHTTTT------STTGG--------GCCC-HHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHhccC------CChhh--------HHHH-HHHHHHHHHHHHHHHHHhcC
Confidence 66555443221 12211 1112 56678888999999888754
No 70
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.67 E-value=2.5e-15 Score=121.71 Aligned_cols=181 Identities=15% Similarity=0.145 Sum_probs=128.7
Q ss_pred CCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcccCcccccccCCCchHHHHHh
Q 039787 58 DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRK 137 (278)
Q Consensus 58 ~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~ 137 (278)
.+++..+.++++ +|||+++..| .+++++++.+++++.+ ..|+.++...........+.+++..+ |+.|+++|+
T Consensus 20 ~dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d--~~fs~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~ 92 (394)
T 2wiy_A 20 NNPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKL--PIMSVEPGWADAGPWAVASDTALGSD-PPHHTVLRR 92 (394)
T ss_dssp HCCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTS--TTEECHHHHHTCGGGGGGGGSGGGCC-TTHHHHHHH
T ss_pred cCccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcC--CCccccccccccccchhcccccccCC-chHHHHHHH
Confidence 467888888865 5899987543 6899999999999954 34544322111111111245565555 999999999
Q ss_pred hhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHhcccccCccHHHHHHHHHHHHH
Q 039787 138 ICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMT 217 (278)
Q Consensus 138 ~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~ 217 (278)
+++ ++|+.+.++.+.+.+.+.++++++.|. .++++|+.+.+..+++++++..+||.+.+ +.+.+.+.+.+.+.
T Consensus 93 ~~~-~~fs~~~~~~~~~~i~~~~~~l~~~~~----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~--~~~~~~~~~~~~~~ 165 (394)
T 2wiy_A 93 QTN-KWFTPKLVDGWVRTTRELVGDLLDGVE----AGQVIEARRDLAVVPTHVTMARVLQLPED--DADAVMEAMFEAML 165 (394)
T ss_dssp HHH-TTCSHHHHHHHTHHHHHHHHHHHHTCC----TTCCEEHHHHHTHHHHHHHHHHHHTCCCC--CHHHHHHHHHHHHG
T ss_pred HHH-hccCHHHHHHHHHHHHHHHHHHHHHHh----ccCCeeHHHHHHhhhHHHHHHHHcCCCHh--HHHHHHHHHHHHHH
Confidence 999 999999999999999999999999875 45679999999999999999999999753 34455554433221
Q ss_pred HhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 218 ELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 218 ~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
.. ...| .....++..++...+.+++.++|++++++
T Consensus 166 ~~------~~~p------~~~~~~~~~~~~~~l~~~~~~~i~~rr~~ 200 (394)
T 2wiy_A 166 MQ------SAEP------ADGDVDRAAVAFGYLSARVAEMLEDKRVN 200 (394)
T ss_dssp GG------SSSC------CTTHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hc------cCCc------cchHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 11 0112 11223455567788889999999988764
No 71
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.65 E-value=7.7e-16 Score=124.83 Aligned_cols=145 Identities=13% Similarity=0.128 Sum_probs=110.0
Q ss_pred CCCCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHhcCCCCC-C-CCch--hhhh--hccc-CcccccccC
Q 039787 56 LGDKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQNHDSSFC-N-RMVP--DAAC--SYNH-QEIGMVWLP 127 (278)
Q Consensus 56 ~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~~~~~~~-~-~~~~--~~~~--~~~~-~g~~~~~~~ 127 (278)
+..+++..+.+| ++||||+++++ ++.+.++++||+.+++++.++ .|. + ++.. .... .+.. .+.++++.
T Consensus 14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 89 (396)
T 1n40_A 14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI- 89 (396)
T ss_dssp CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH-
T ss_pred cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH-
Confidence 356889999999 99999999997 789999999999999999653 354 4 3321 1110 0111 24566554
Q ss_pred CCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCccHH
Q 039787 128 VSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPTAR 206 (278)
Q Consensus 128 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~ 206 (278)
.|+++|++++ ++|+.+ ++.+.+.+.++++++++.|.+ .++++|+.+.+ ..+++++++. +||.+.+ +.+
T Consensus 90 ---~h~~~R~~~~-~~fs~~-~~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~--~~~ 158 (396)
T 1n40_A 90 ---ADAGLRKAVM-KAITPK-APGLEQFLRDTANSLLDNLIT---EGAPADLRNDFADPLATALHCK-VLGIPQE--DGP 158 (396)
T ss_dssp ---HHTTCHHHHH-HHTSSC-STTHHHHHHHHHHHHHHHHHH---HCSCEETTTTTHHHHHHHHHHH-HHTCCGG--GHH
T ss_pred ---HHHHHHHHHH-HhhChH-HHHhHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHhHHHHHHH-HhCCChh--hHH
Confidence 9999999999 999999 999999999999999999974 25689998665 4899999999 8999863 234
Q ss_pred HHHHHHHHH
Q 039787 207 EFKDIVWGI 215 (278)
Q Consensus 207 ~~~~~~~~~ 215 (278)
++.+....+
T Consensus 159 ~~~~~~~~~ 167 (396)
T 1n40_A 159 KLFRSLSIA 167 (396)
T ss_dssp HHHHTHHHH
T ss_pred HHHHHHHHH
Confidence 455544433
No 72
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.62 E-value=1.9e-15 Score=123.23 Aligned_cols=181 Identities=13% Similarity=0.105 Sum_probs=125.1
Q ss_pred CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCc-hhhhhh------cccCcccccccCCC
Q 039787 57 GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMV-PDAACS------YNHQEIGMVWLPVS 129 (278)
Q Consensus 57 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~-~~~~~~------~~~~g~~~~~~~~g 129 (278)
..+++.+ ++.++|||++++.+++.. +++++++.+++|+.++. +..... ...... ....+.+++..+ |
T Consensus 32 ~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 105 (416)
T 3p3o_A 32 PNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLD-G 105 (416)
T ss_dssp TTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCC-H
T ss_pred ccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCC-c
Confidence 4567777 445679999999886555 99999999999996643 322211 100000 001134566655 9
Q ss_pred chHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHH-HHHHHHHHHHHHHhcccccCccHHHH
Q 039787 130 TPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQA-VFNTSLNVLSNTIFSVDLVDPTAREF 208 (278)
Q Consensus 130 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~ 208 (278)
+.|+++|++++ ++|+.+.++.+.+.+.++++++++.| + .| .+|+... ...+++++|+. +||.+.. +.+.+
T Consensus 106 ~~h~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l-~---~g-~~d~~~~~~~~~~~~vi~~-l~G~~~~--~~~~~ 176 (416)
T 3p3o_A 106 ADHRRLRGLAT-HPFTPRRITAVQPFVRSTVEQLIDKL-P---QG-DFDFVQHFPHPLPALVMCQ-LLGFPLE--DYDTV 176 (416)
T ss_dssp HHHHHHHHTTC-GGGSHHHHHHHHHHHHHHHHHHHHTC-C---SS-SEEHHHHTTTHHHHHHHHH-HHTCCGG--GHHHH
T ss_pred hHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhh-c---cC-CccHHHHHHHHHHHHHHHH-HhCCCHH--HHHHH
Confidence 99999999999 99999999999999999999999998 3 33 4896554 45799999998 5898752 23344
Q ss_pred HHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039787 209 KDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ 264 (278)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (278)
......+.... .+. ......++..++.+.+.+++.++|++++++
T Consensus 177 ~~~~~~~~~~~---------~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~ 220 (416)
T 3p3o_A 177 GRLSIETNLGL---------ALS---NDQDILVKVEQGLGRMFDYLVAAIEKRKVE 220 (416)
T ss_dssp HHHHHTTCGGG---------TTC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhhc---------ccc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 43333222211 110 023345677788899999999999998865
No 73
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.61 E-value=4.1e-15 Score=119.38 Aligned_cols=128 Identities=17% Similarity=0.212 Sum_probs=100.8
Q ss_pred chHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCc-----hhhh--hh--ccc-CcccccccCCC
Q 039787 60 PHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMV-----PDAA--CS--YNH-QEIGMVWLPVS 129 (278)
Q Consensus 60 ~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~-----~~~~--~~--~~~-~g~~~~~~~~g 129 (278)
++..+.++ ++||||+++ | +.++++||+.+++++.+ ...|++++. .... .. +.. .|.++++.+ |
T Consensus 1 p~~~~~~l-r~~Gpv~~~---g-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-g 73 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD---G-NIWQVFSYRYTKEVLNN-FSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSD-P 73 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC---S-SCEEECSHHHHHHHHHC-TTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCC-T
T ss_pred CCHHHHHH-HhcCCeEeE---C-CEEEEecHHHHHHHHcC-cccccccccccccccccccccccccccccccccccCC-C
Confidence 35567777 589999987 3 58999999999999976 456777764 1101 11 111 125676665 9
Q ss_pred chHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhccccc
Q 039787 130 TPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLV 201 (278)
Q Consensus 130 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~ 201 (278)
+.|+++|++++ ++|+.+.++.+.+.+.++++++++.| + .+ ++|+.+.+ ..+++++|+.+ ||.+.+
T Consensus 74 ~~h~~~R~~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l-~---~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~ 139 (368)
T 1io7_A 74 PLHDELRSMSA-DIFSPQKLQTLETFIRETTRSLLDSI-D---PR-EDDIVKKLAVPLPIIVISKI-LGLPIE 139 (368)
T ss_dssp THHHHHHGGGT-TTTCHHHHHHHHHHHHHHHHHHHHTC-C---TT-SEEHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred hHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHh-h---cC-CccHHHHHHHHHHHHHHHHH-hCCCHH
Confidence 99999999999 99999999999999999999999998 3 33 69999876 78999999999 999863
No 74
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.58 E-value=5.2e-15 Score=117.65 Aligned_cols=127 Identities=17% Similarity=0.172 Sum_probs=98.2
Q ss_pred HHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcccCcccccccCCCchHHHHHhhhhhhccCcch
Q 039787 69 KIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHK 148 (278)
Q Consensus 69 ~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~ 148 (278)
++||||+++ | .++++||+.+++++.++ ..|.+++....... .+.++++.+ |+.|+++|++++ ++|+.++
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~---~~~~l~~~~-g~~~~~~R~~~~-~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSNA---GGISFITMD-NPEHKEFRDISA-PYFLPSK 70 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCGGGGCC-HHHHHHHHHHHH-HHHSHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCCc---cccccccCC-chHHHHHHHHhh-hhcCHHH
Confidence 579999986 4 89999999999999764 46777652111111 256777665 999999999999 9999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCccHHHHHHHHHHHH
Q 039787 149 LDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIM 216 (278)
Q Consensus 149 l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~ 216 (278)
++.+.+.+.++++++++.|. ++|+.+.+ ..+++|+++.+ ||.+.+ +.+++.+....++
T Consensus 71 l~~~~~~i~~~~~~l~~~l~-------~~d~~~~~~~~~~~~vi~~~-~G~~~~--~~~~~~~~~~~~~ 129 (343)
T 2rfb_A 71 INDYKDFIEETSNDLIKNID-------NKDIISEYAVRLPVNIISKI-LGIPDS--DMPLFKLWSDYII 129 (343)
T ss_dssp HGGGHHHHHHHHHHHHTTCT-------TSCHHHHTTTHHHHHHHHHH-HTCCGG--GHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcc-------ccCHHHHHhhhhhHHHHHHH-cCCCHH--HHHHHHHHHHHHh
Confidence 99999999999999998875 68998865 89999999999 999863 2345555544443
No 75
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.44 E-value=4.5e-12 Score=103.15 Aligned_cols=184 Identities=10% Similarity=0.072 Sum_probs=120.8
Q ss_pred CCchHHHHHHHHHhC-CceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhcccCcccccccCCCchHHHHH
Q 039787 58 DKPHKSLAKLAKIHG-PIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLR 136 (278)
Q Consensus 58 ~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R 136 (278)
.+++..+.++++..+ +++..-.+ ....+|++.+.+++|+.+ ...|++........... .+..++...|+++|+++|
T Consensus 37 ~~~~~~~~~lr~~~~~~~~~~~~~-gg~W~vtr~~dv~~vl~d-~~~fs~~~~~~~~~~~~-~~~~~~~~~D~p~H~r~R 113 (417)
T 4dxy_A 37 DGYHEAWKKVQHPGIPDLIWTPFT-GGHWIATNGDTVKEVYSD-PTRFSSEVIFLPKEAGE-KAQMVPTKMDPPEHTPYR 113 (417)
T ss_dssp GCHHHHHHHHSCTTCCSEEEESST-TSEEEECSHHHHHHHHTC-TTTEESSCCSSSTTSSC-SSCTTTTTCCTTTHHHHH
T ss_pred cChHHHHHHHHhhCCCCEEecCCC-CCEEEECCHHHHHHHHcC-chhccCCCccccccccc-ccccCcccCCcHHHHHHH
Confidence 467777777765543 45443232 356788999999999954 45666543322211111 123333344599999999
Q ss_pred hhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-HHHHHHHHHHHHhcccccCccHHHHHHHHHHH
Q 039787 137 KICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV-FNTSLNVLSNTIFSVDLVDPTAREFKDIVWGI 215 (278)
Q Consensus 137 ~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~ 215 (278)
++++ ++|+.++++.+.+.+.+.++++++.+. .++.+|+...+ ..+++.+++. ++|... ++...+.+....+
T Consensus 114 rll~-~~Fs~~~l~~~~~~i~~~~~~lld~l~----~~g~~D~v~~~a~~l~~~vi~~-llg~~~--~d~~~~~~~~~~~ 185 (417)
T 4dxy_A 114 KALD-KGLNLAKIRKVEDKVREVASSLIDSFA----ARGECDFAAEYAELFPVHVFMA-LADLPL--EDIPVLSEYARQM 185 (417)
T ss_dssp HHHH-HHHCHHHHHTTHHHHHHHHHHHHHHHH----TTSEEEHHHHTTTTHHHHHHHH-HTTCCG--GGHHHHHHHHHHH
T ss_pred HHhh-hhcCHHHHHHHHHHHHHHHHHHHHHhh----hcCCeeeHHHHHhhhHHHHHHH-HcCCCH--HHHHHHHhhhhhh
Confidence 9999 999999999999999999999999997 34568865554 4566666665 478764 3334555444433
Q ss_pred HHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787 216 MTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR 265 (278)
Q Consensus 216 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (278)
..... .. ..........+...+.+++.++|++|++..
T Consensus 186 ~~~~~------------~~-~~~~~~~~~~~~~~~~~~~~~li~~rr~~~ 222 (417)
T 4dxy_A 186 TRPEG------------NT-PEEMATDLEAGNNGFYAYVDPIIRARVGGD 222 (417)
T ss_dssp HSCCC------------SS-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccc------------cC-hHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 22111 11 223345666788899999999999887653
No 76
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.36 E-value=3.5e-12 Score=103.80 Aligned_cols=146 Identities=13% Similarity=0.133 Sum_probs=101.7
Q ss_pred CCCCeeeccc---cCCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhh---hhhccc
Q 039787 45 TPYPVIGNLL---ELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDA---ACSYNH 118 (278)
Q Consensus 45 ~~~p~~g~~~---~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~---~~~~~~ 118 (278)
.++|.+|--+ .+..+++..+.+++ ++|||+++ .+...++|++++.+++++.+ ...|++...... ......
T Consensus 18 ~~~P~~~~dp~~~~~~~dP~~~~~~lR-~~gPV~~~--~~~~~~~vt~~~~v~~vl~d-~~~fs~~~~~~~~~~~~~~~~ 93 (412)
T 4dnj_A 18 AGVPHLGIDPFALDYFADPYPEQETLR-EAGPVVYL--DKWNVYGVARYAEVYAVLND-PLTFCSSRGVGLSDFKKEKPW 93 (412)
T ss_dssp TTSCEECCCTTSHHHHHSCHHHHHHHH-HHCSSEEE--TTTTEEEECSHHHHHHHHTC-TTTEESTTCSSSSCTTTSCCS
T ss_pred CCCCccCCCCCCHHHHhCcHHHHHHHH-hcCCEEEE--CCCCEEEECCHHHHHHHHcC-CccccCCCccccccccccccc
Confidence 3567766321 22467888888886 47999865 45568899999999999954 344443322111 111111
Q ss_pred CcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccch-HHHHHHHHHHHHHHHHhc
Q 039787 119 QEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVI-GQAVFNTSLNVLSNTIFS 197 (278)
Q Consensus 119 ~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~-~~~~~~~~~~vi~~~~fG 197 (278)
.+.+.+...+|+.|+++|++++ ++|+.++++.+.+.+.+.++++++.+.. .++.+|+ .+....+++++++.++ |
T Consensus 94 ~~~~~~~~~Dg~~H~r~R~~~~-~~Fs~~~l~~~~~~i~~~~~~l~~~~~~---~~~~~D~v~~~~~~~~~~~i~~l~-g 168 (412)
T 4dnj_A 94 RPPSLILEADPPAHTRTRAVLS-KVLSPATMKRLRDGFAAAADAKIDELLA---RGGNIDAIADLAEAYPLSVFPDAM-G 168 (412)
T ss_dssp SCCCTTTTCCTTHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHH---TTSEEETCCCCCCHHHHHHHHHHH-T
T ss_pred cCCCccccCChHHHHHHHhhcc-cccCHHHHHHhhHHHHHHHHHHHHhhhc---cCCCceeHHHHHhhhhHhHHHHHc-C
Confidence 1233344445999999999999 9999999999999999999999999863 3456664 5566778888888764 5
Q ss_pred cc
Q 039787 198 VD 199 (278)
Q Consensus 198 ~~ 199 (278)
..
T Consensus 169 ~~ 170 (412)
T 4dnj_A 169 LK 170 (412)
T ss_dssp CC
T ss_pred Cc
Confidence 44
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.48 E-value=5.6e-10 Score=89.27 Aligned_cols=130 Identities=12% Similarity=0.146 Sum_probs=85.6
Q ss_pred CCCC-CCCCCeeecccc-----CCCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchh--
Q 039787 40 QPPG-PTPYPVIGNLLE-----LGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPD-- 111 (278)
Q Consensus 40 ~~pg-p~~~p~~g~~~~-----~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~-- 111 (278)
.||| ++++|++|+... +..+++..+.+++++ ||++.. .+.+++++++.+++|+.+ ..|++++...
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~~~ 107 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD--PAFTRATGRTPE 107 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC--SSEESSCCCCCH
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCcccccc
Confidence 3566 446788886533 356889999999875 998764 468999999999999975 3566543211
Q ss_pred h-------hhhcccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHH-
Q 039787 112 A-------ACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAV- 183 (278)
Q Consensus 112 ~-------~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~- 183 (278)
. ...+ +.++++.+ |+.| + ++|+ . .+.+.+.++++++.|. +.+|+...+
T Consensus 108 ~~~~~~~~~~~~---~~~l~~~d-g~~H-------~-~~Ft-----~-~~~i~~~~~~ll~~~~------g~~Dl~~~~a 163 (381)
T 2yjn_B 108 WMRAAGAPPAEW---AQPFRDVH-AASW-------E-GEVP-----D-VGELAESFAGLLPGAG------ARLDLVGDFA 163 (381)
T ss_dssp HHHHHTCCHHHH---THHHHHHH-HCCC-------C-SCCC-----C-CSCHHHHTSTTSCC------------CCCCCC
T ss_pred cccccccccchh---hhhhhhCC-chhh-------h-hccC-----C-hHHHHHHHHHHHHhcc------CcchHHHHHH
Confidence 0 1111 35666666 9999 5 8898 2 6788889999988875 258887665
Q ss_pred HHHHHHHHHHHHhccccc
Q 039787 184 FNTSLNVLSNTIFSVDLV 201 (278)
Q Consensus 184 ~~~~~~vi~~~~fG~~~~ 201 (278)
..+++++|+.+ ||.+.+
T Consensus 164 ~~l~~~vi~~l-~G~~~~ 180 (381)
T 2yjn_B 164 WQVPVQGMTAV-LGAAGV 180 (381)
T ss_dssp THHHHHHHHTC------C
T ss_pred HHHHHHHHHHH-cCCCHH
Confidence 69999999995 999863
No 78
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.44 E-value=6.6 Score=24.13 Aligned_cols=60 Identities=12% Similarity=0.130 Sum_probs=41.8
Q ss_pred CeeeccccCC--CCchHHHHHHHHHhC-CceEEeccCeeEEEecCHHHHHHHHHh-cCCCCCCCC
Q 039787 48 PVIGNLLELG--DKPHKSLAKLAKIHG-PIMTLKFGQVTTVVVSSASMAKAILQN-HDSSFCNRM 108 (278)
Q Consensus 48 p~~g~~~~~~--~~~~~~~~~~~~~yG-~i~~~~~~~~~~v~i~dp~~~~~i~~~-~~~~~~~~~ 108 (278)
-+++|+..-. ......+.++..+|| +|..+ .+|.-.|...+.+.++..+.. +...+..++
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~ 75 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNR 75 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSC
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCce
Confidence 4478886542 122345778899995 99888 469999999999999888753 444444443
No 79
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=75.75 E-value=12 Score=23.21 Aligned_cols=51 Identities=16% Similarity=0.211 Sum_probs=36.9
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc--------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG--------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++.. ......+.++..+||+|..+.+. |.-.|...+++.+..++..
T Consensus 13 ~lfV~~Lp~--~~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~ 71 (103)
T 1s79_A 13 SVYIKGFPT--DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 71 (103)
T ss_dssp CEEEECCCT--TCCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTS
T ss_pred EEEEECCCC--CCCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHc
Confidence 345666653 24456678888999999888653 4567888899999999863
No 80
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=74.41 E-value=13 Score=23.25 Aligned_cols=57 Identities=23% Similarity=0.241 Sum_probs=41.2
Q ss_pred CCCCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc------CeeEEEecCHHHHHHHHH
Q 039787 40 QPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 40 ~~pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~------~~~~v~i~dp~~~~~i~~ 98 (278)
.||.|...-++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.+...+.
T Consensus 3 ~~~~~~~~l~V~nlp~--~~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPY--KITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CCTTCCSEEEEESCCT--TCCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 4555655667788753 34456678888999999888762 356788889998888875
No 81
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=72.90 E-value=12 Score=22.23 Aligned_cols=53 Identities=13% Similarity=0.166 Sum_probs=36.8
Q ss_pred CCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc----CeeEEEecCHHHHHHH
Q 039787 42 PGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG----QVTTVVVSSASMAKAI 96 (278)
Q Consensus 42 pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~v~i~dp~~~~~i 96 (278)
+-|...-++|++.. ....+.++++..+||+|..+.+. |.-.|...+++.++.+
T Consensus 8 ~~~~~~l~V~~Lp~--~~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 8 HHHGSKVFVGRCTE--DMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp ---CCEEEEESCCT--TCCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCC--CCCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 34444556677753 34456688888999999988864 5677888899988853
No 82
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=67.69 E-value=14 Score=20.79 Aligned_cols=42 Identities=10% Similarity=0.227 Sum_probs=30.8
Q ss_pred CchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHhc
Q 039787 59 KPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQNH 100 (278)
Q Consensus 59 ~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~~ 100 (278)
.....+.++..+||+|..+.+. |.-.|-..+++.++..+..+
T Consensus 11 ~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 61 (75)
T 1iqt_A 11 TPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 61 (75)
T ss_dssp CCHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTS
T ss_pred CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhC
Confidence 3455678888899998887652 24567778999999988543
No 83
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=66.20 E-value=16 Score=21.01 Aligned_cols=51 Identities=18% Similarity=0.208 Sum_probs=35.6
Q ss_pred eeeccccCCCC----chHHHHHHHHHhCCceEEecc-------CeeEEEecCHHHHHHHHHh
Q 039787 49 VIGNLLELGDK----PHKSLAKLAKIHGPIMTLKFG-------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 49 ~~g~~~~~~~~----~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~dp~~~~~i~~~ 99 (278)
++|+++.-... ....+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 5 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp EEESCCCCCTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 45666533222 346678888999999888764 4567778899999988853
No 84
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=61.74 E-value=17 Score=19.56 Aligned_cols=14 Identities=7% Similarity=0.033 Sum_probs=6.0
Q ss_pred HHHHHHHhhhccCC
Q 039787 23 VMALSSFYKRRKAG 36 (278)
Q Consensus 23 ~~~~~~~~~~~~~~ 36 (278)
.++.+.+|+.-+++
T Consensus 27 ~li~~~LwK~GFFk 40 (54)
T 2knc_A 27 TILVLAMWKVGFFK 40 (54)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCccc
Confidence 33444444444444
No 85
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=60.17 E-value=21 Score=20.08 Aligned_cols=48 Identities=10% Similarity=0.135 Sum_probs=32.8
Q ss_pred eeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 50 IGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 50 ~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
+|++.. ......+.++..+||+|..+.+. |.-.|-..+++.++.++..
T Consensus 4 v~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 60 (75)
T 2mss_A 4 VGGLSV--NTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 60 (75)
T ss_dssp EECCCS--SCCHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSS
T ss_pred EecCCC--CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHC
Confidence 445432 23455678888999998887652 2356777899999888753
No 86
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=51.82 E-value=39 Score=20.68 Aligned_cols=53 Identities=17% Similarity=0.177 Sum_probs=38.2
Q ss_pred CCeeeccccCCCC----chHHHHHHHHHhCCceEEecc-------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDK----PHKSLAKLAKIHGPIMTLKFG-------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~----~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++..-... ....+.++..+||+|..+.+. |.-.|...+++.+...+..
T Consensus 17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 4567887643222 346688888999999888764 4567778899988888754
No 87
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=47.81 E-value=38 Score=19.49 Aligned_cols=51 Identities=24% Similarity=0.145 Sum_probs=34.7
Q ss_pred CCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHH
Q 039787 46 PYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 46 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~ 98 (278)
..-++|++.. ......+.++..+||+|..+.+. |.-.|...+++.++..+.
T Consensus 6 ~~l~v~nlp~--~~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 6 SGLYIRGLQP--GTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp CEEEEESCCT--TCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred cEEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 3445677653 23445577777889998887642 235677889998888875
No 88
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=45.90 E-value=53 Score=20.51 Aligned_cols=58 Identities=10% Similarity=0.081 Sum_probs=40.6
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc--CeeEEEecCHHHHHHHHHh-cCCCCCC
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG--QVTTVVVSSASMAKAILQN-HDSSFCN 106 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--~~~~v~i~dp~~~~~i~~~-~~~~~~~ 106 (278)
--++|++.. ....+.+.++..+||+|..+.+. +.-.|...+++.++..+.. +...+..
T Consensus 18 ~l~V~nLp~--~~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 78 (115)
T 3beg_B 18 RVVVSGLPP--SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS 78 (115)
T ss_dssp CEEEEECCS--SCCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCC
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 345677763 33455678888999999888764 5677888899999988863 3344443
No 89
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=44.90 E-value=54 Score=20.38 Aligned_cols=54 Identities=15% Similarity=0.154 Sum_probs=39.1
Q ss_pred CCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHH
Q 039787 43 GPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 43 gp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~ 98 (278)
.|...-++|++.. .-....+.++..+||.|..+.+. |.-.|-..+++.+...+.
T Consensus 14 ~~~~~LfV~nLp~--~vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 14 VPSRVIHIRKLPI--DVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCCCEEEECSCCT--TSCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 3334456677753 23455678889999999888764 567888889998888875
No 90
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=43.95 E-value=56 Score=20.28 Aligned_cols=51 Identities=16% Similarity=0.198 Sum_probs=36.5
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
--++|++.. .-....+.++..+||+|..+.+. |.-.|...+++.++..+..
T Consensus 8 ~lfV~nL~~--~~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 8 EVTFARLND--NVRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEEESCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCC--CCCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 345677753 34556678888999999888652 2347888899999998854
No 91
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=43.02 E-value=25 Score=18.84 Aligned_cols=13 Identities=8% Similarity=0.069 Sum_probs=5.3
Q ss_pred HHHHHHhhhccCC
Q 039787 24 MALSSFYKRRKAG 36 (278)
Q Consensus 24 ~~~~~~~~~~~~~ 36 (278)
++.+..|+.-+++
T Consensus 25 Lii~~LwK~GFFK 37 (54)
T 2l8s_A 25 LLILALWKIGFFK 37 (54)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHcCccc
Confidence 3344444443333
No 92
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=42.91 E-value=56 Score=20.00 Aligned_cols=50 Identities=10% Similarity=0.040 Sum_probs=38.0
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc--CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG--QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++.. ......+.++..+||+|..+.+. +.-.|...+++.++..+..
T Consensus 18 l~V~nLp~--~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 18 VVVSGLPP--SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEESCCS--SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 45677753 34566788889999999888763 6778888899999988864
No 93
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=41.68 E-value=53 Score=19.33 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=37.6
Q ss_pred CCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 43 GPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 43 gp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
.|...-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 13 ~~~~~l~v~nlp~--~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 13 DPNCCLGVFGLSL--YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CGGGCEEEESCCS--SCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEECCCC--CCCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3333456677753 24456678888999998888652 1346677899999988853
No 94
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=41.09 E-value=70 Score=20.58 Aligned_cols=53 Identities=21% Similarity=0.233 Sum_probs=35.0
Q ss_pred CCeeeccccCC--CCchHHHHHHHHHhCCceEEecc------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELG--DKPHKSLAKLAKIHGPIMTLKFG------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~------~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++..-. .+....+.++..+||+|..+.+. |.-.|...+++.+...+..
T Consensus 31 ~LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 31 VVLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 34567775321 11122355788999999888652 4567888899988888754
No 95
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=41.07 E-value=65 Score=20.23 Aligned_cols=47 Identities=13% Similarity=0.113 Sum_probs=33.3
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHH
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAIL 97 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~ 97 (278)
++|++.. ......+.++..+||+|..+.+. |.-.|...+++.++..+
T Consensus 40 ~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~ 95 (124)
T 2jwn_A 40 YVGNVDY--GSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAV 95 (124)
T ss_dssp EEEEECT--TCCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHH
Confidence 4565542 23456678888999998877652 23567788999999888
No 96
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=40.26 E-value=64 Score=19.87 Aligned_cols=64 Identities=9% Similarity=0.027 Sum_probs=38.7
Q ss_pred CCCCCCCeeeccccC---CCCchHHHHHHHHHhCCceEEecc----------CeeEEEecCHHHHHHHHHh-cCCCCC
Q 039787 42 PGPTPYPVIGNLLEL---GDKPHKSLAKLAKIHGPIMTLKFG----------QVTTVVVSSASMAKAILQN-HDSSFC 105 (278)
Q Consensus 42 pgp~~~p~~g~~~~~---~~~~~~~~~~~~~~yG~i~~~~~~----------~~~~v~i~dp~~~~~i~~~-~~~~~~ 105 (278)
+.|...-++.|+..- ..+....+.+...+||+|..+.+. |.-.|-..+++.+...... +...|.
T Consensus 5 ~~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~ 82 (105)
T 2pe8_A 5 KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFG 82 (105)
T ss_dssp GSCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEET
T ss_pred CCCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEEC
Confidence 344445566666532 234556677778899998888652 2345667788888877643 344443
No 97
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=39.86 E-value=54 Score=18.92 Aligned_cols=51 Identities=16% Similarity=0.230 Sum_probs=35.7
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++.. .-....+.++..+||+|..+.+. |.-.|...+++.++..+..
T Consensus 13 ~l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 72 (87)
T 3s7r_A 13 KMFVGGLSW--DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 72 (87)
T ss_dssp EEEEECCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHS
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHh
Confidence 445677753 24556678888999998887652 1356677799999888854
No 98
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=39.63 E-value=67 Score=19.97 Aligned_cols=50 Identities=20% Similarity=0.159 Sum_probs=36.0
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc-------CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++.. .-....+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 8 lfV~nLp~--~~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDK--SIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCC--CCCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 45677753 23456788889999999877652 2357888899999998854
No 99
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=38.85 E-value=64 Score=19.47 Aligned_cols=50 Identities=16% Similarity=0.132 Sum_probs=34.9
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc-----C----eeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-----Q----VTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-----~----~~~v~i~dp~~~~~i~~~ 99 (278)
-++||+.. .-....+.++..+||+|..+.+. + .-.|-..+++.++..+..
T Consensus 22 lfV~nLp~--~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 22 LIVNYLPQ--NMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEEESCCT--TCCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 45677753 23456678888999999887652 1 235777899999888753
No 100
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=37.81 E-value=67 Score=19.41 Aligned_cols=50 Identities=14% Similarity=0.159 Sum_probs=35.3
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 26 l~V~nlp~--~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 26 LFVTGVHE--EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEEECCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 35566653 23456678888999999888753 2356777899999888853
No 101
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.96 E-value=64 Score=18.95 Aligned_cols=58 Identities=14% Similarity=0.129 Sum_probs=39.1
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh-cCCCCCC
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN-HDSSFCN 106 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~-~~~~~~~ 106 (278)
.-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+.. +...+..
T Consensus 7 ~l~v~nlp~--~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 74 (95)
T 2dnz_A 7 GLYVGSLHF--NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG 74 (95)
T ss_dssp EEEEESCCT--TCCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSSS
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeCC
Confidence 445677653 24456678888999998887652 2456778899999998863 3344433
No 102
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=36.92 E-value=81 Score=20.09 Aligned_cols=51 Identities=14% Similarity=0.125 Sum_probs=37.4
Q ss_pred CCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHH
Q 039787 46 PYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 46 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~ 98 (278)
..-++|++.. .-....+.++..+||.|..+.+. |.-.|-..+.+.+...+.
T Consensus 32 ~~LfVgNLp~--~vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 32 RVIHIRKLPI--DVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp SEEEEESCCT--TCCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred CEEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 3456787763 23456678889999999888754 567788889988888874
No 103
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=36.64 E-value=95 Score=20.83 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=35.8
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 75 l~V~nLp~--~~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 75 LFVTSIHE--EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 45566653 34566788888999998887653 3456777899998888853
No 104
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=36.41 E-value=80 Score=19.88 Aligned_cols=57 Identities=12% Similarity=0.160 Sum_probs=39.2
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh-cCCCCCC
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN-HDSSFCN 106 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~-~~~~~~~ 106 (278)
-++|++.. ......+.++..+||+|..+.+. +.-.|...+++.+..++.. +...+..
T Consensus 25 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 91 (126)
T 3ex7_B 25 LFVTGVHE--EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMG 91 (126)
T ss_dssp EEEESCCT--TCCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSS
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCC
Confidence 45566653 23456678888999999888762 3467888899999998853 4444433
No 105
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=36.35 E-value=75 Score=19.52 Aligned_cols=56 Identities=13% Similarity=0.028 Sum_probs=39.5
Q ss_pred CCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHH
Q 039787 42 PGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 42 pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~ 98 (278)
+.|...-++||+..- ......+.++..+||.|..+.+. +.-.|-..+++.+...+.
T Consensus 12 ~~p~~~l~V~nLp~~-~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 12 VETRRVVHIMDFQRG-KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CCCCCEEEEESCCCS-SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCC-cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 334445667888630 23445677888999999988864 356788889998888875
No 106
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=35.99 E-value=77 Score=19.57 Aligned_cols=57 Identities=12% Similarity=0.075 Sum_probs=38.9
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHHh-cCCCCCCC
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQN-HDSSFCNR 107 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~~-~~~~~~~~ 107 (278)
++|++.. ......+.++..+||+|..+.+. +.-.|...+++.++..+.. +...+..+
T Consensus 14 ~V~nLp~--~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 74 (111)
T 1whx_A 14 LAKNLPA--GTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHV 74 (111)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSS
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCe
Confidence 4566642 34556688888999999888763 4567788899998888753 34444433
No 107
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=35.78 E-value=80 Score=19.71 Aligned_cols=51 Identities=16% Similarity=0.119 Sum_probs=37.7
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhC-CceEEecc-----CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHG-PIMTLKFG-----QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~-----~~~~v~i~dp~~~~~i~~~ 99 (278)
--++||+.. ....+.+.++..+|| .|..+.+. |.-.|-..+++.++..+..
T Consensus 30 ~l~VgnLp~--~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 30 RITMKNLPE--GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEEECSSC--CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCC--CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 445677753 345677888999999 78777663 5678888899999888854
No 108
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=35.66 E-value=1e+02 Score=21.75 Aligned_cols=55 Identities=20% Similarity=0.237 Sum_probs=37.6
Q ss_pred CCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 43 GPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 43 gp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
.|...-++|++.. .--...+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 13 ~p~~tlfVgnLp~--~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 13 YPMASLYVGDLHP--DVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp --CCEEEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCcEEEEeCCCC--CCCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 3444456788753 34456678888999999887652 2357778899999988854
No 109
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=35.59 E-value=78 Score=22.13 Aligned_cols=49 Identities=16% Similarity=0.245 Sum_probs=35.3
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc--------CeeEEEecCHHHHHHHHHh
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG--------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~dp~~~~~i~~~ 99 (278)
++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 113 ~V~nLp~--~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~ 169 (193)
T 2voo_A 113 YIKGFPT--DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 169 (193)
T ss_dssp EEECCCT--TCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHC
T ss_pred EecCCCC--cCCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHh
Confidence 4566642 34556788889999998877653 3466777899999999854
No 110
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.84 E-value=78 Score=19.32 Aligned_cols=40 Identities=20% Similarity=0.305 Sum_probs=31.9
Q ss_pred chHHHHHHHHHhCCceEEecc----CeeEEEecCHHHHHHHHHh
Q 039787 60 PHKSLAKLAKIHGPIMTLKFG----QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 60 ~~~~~~~~~~~yG~i~~~~~~----~~~~v~i~dp~~~~~i~~~ 99 (278)
....++++..+||+|..+.+. |.-.|...+++.+...+..
T Consensus 30 te~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 30 SKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp CHHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 356788899999999888763 4567888899999988865
No 111
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=34.81 E-value=90 Score=19.99 Aligned_cols=54 Identities=17% Similarity=0.111 Sum_probs=37.8
Q ss_pred CCCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 44 PTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 44 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
|...-++|++.. .-....+.++..+||+|..+.+. |.-.|-..+++.++.++..
T Consensus 45 ~~~~l~V~nLp~--~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 45 PNCCLGVFGLSL--YTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CSSCBCEETCTT--SCCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 333455677653 23455678888999999888763 2456778899999998863
No 112
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.62 E-value=80 Score=19.36 Aligned_cols=50 Identities=12% Similarity=0.078 Sum_probs=34.7
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc-------CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 32 l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~ 88 (109)
T 2err_A 32 LHVSNIPF--RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 88 (109)
T ss_dssp EEEESCCT--TCCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHHH
T ss_pred EEEECCCC--cCCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHHH
Confidence 34566643 24456678888999998777653 4556777888888888753
No 113
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=33.94 E-value=57 Score=20.57 Aligned_cols=65 Identities=17% Similarity=0.198 Sum_probs=39.8
Q ss_pred CCCCCCCCeeeccccCCC--------CchHHHHHHHHHhCCceEEecc-----CeeEEEecCHHHHHHHHHh-cCCCCC
Q 039787 41 PPGPTPYPVIGNLLELGD--------KPHKSLAKLAKIHGPIMTLKFG-----QVTTVVVSSASMAKAILQN-HDSSFC 105 (278)
Q Consensus 41 ~pgp~~~p~~g~~~~~~~--------~~~~~~~~~~~~yG~i~~~~~~-----~~~~v~i~dp~~~~~i~~~-~~~~~~ 105 (278)
+|.|...-++.|+..... .....+.+...+||.|..+.+. |.-.|-..+++.+...+.. ++..|.
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~ 81 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA 81 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEET
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 566666666666655411 1122345666789999888752 4567777788888877643 344443
No 114
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=33.89 E-value=81 Score=19.21 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=36.2
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 29 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 87 (110)
T 1oo0_B 29 LFVTSIHE--EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 87 (110)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 35666653 23456678888999999888763 3467778899999988853
No 115
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=33.66 E-value=79 Score=19.02 Aligned_cols=50 Identities=16% Similarity=0.226 Sum_probs=34.7
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHH
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~ 98 (278)
+-++||+.. .---..++++..+||+|..+.+. |.-.|-..+++.+.....
T Consensus 9 wL~VgNL~~--~~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~ 61 (89)
T 2wbr_A 9 WLLLKNLTA--QIDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQM 61 (89)
T ss_dssp EEEEECCCT--TCCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred eEEEeCCCc--cCCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHH
Confidence 445677743 23456788999999999988752 456777778876666653
No 116
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=32.79 E-value=79 Score=18.73 Aligned_cols=56 Identities=14% Similarity=0.185 Sum_probs=39.3
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHh-cCCCC
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQN-HDSSF 104 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~-~~~~~ 104 (278)
-++|++..- ......+.++..+||+|..+.+ -+.-.|...+++.+...+.. +...+
T Consensus 13 l~V~nlp~~-~~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~ 70 (96)
T 2kvi_A 13 LFIGNLPLK-NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMN 70 (96)
T ss_dssp EEEESSTTS-CCCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHHHTCSSC
T ss_pred EEEeCCCcc-cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCee
Confidence 456777530 2345667888899999988876 35677888899999999864 33333
No 117
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=32.70 E-value=80 Score=18.78 Aligned_cols=51 Identities=25% Similarity=0.187 Sum_probs=34.3
Q ss_pred CCCeeeccccCCCCchHHHHHHHHHhCCceE--------Eecc---------CeeEEEecCHHHHHHHHH
Q 039787 46 PYPVIGNLLELGDKPHKSLAKLAKIHGPIMT--------LKFG---------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 46 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~--------~~~~---------~~~~v~i~dp~~~~~i~~ 98 (278)
..-++|++.. ......+.++..+||.|.. +.+. |.-.|...+++.++..+.
T Consensus 14 ~~l~V~nLp~--~~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~ 81 (99)
T 2la6_A 14 NTIFVQGLGE--NVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAID 81 (99)
T ss_dssp SEEEEECCCS--SCCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHH
T ss_pred CEEEEeCCCC--CCCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHH
Confidence 3456677753 3445667888899998866 4431 234666779998888875
No 118
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=32.44 E-value=67 Score=17.83 Aligned_cols=49 Identities=14% Similarity=0.110 Sum_probs=31.6
Q ss_pred eeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHhc
Q 039787 50 IGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQNH 100 (278)
Q Consensus 50 ~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~~ 100 (278)
+|++.. ......+.++..+||+|..+.+. |.-.|-..+++.++..+...
T Consensus 5 v~nlp~--~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 62 (77)
T 1uaw_A 5 IGGLSW--QTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 62 (77)
T ss_dssp EESCCS--SCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTT
T ss_pred EeCCCC--CCCHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhC
Confidence 455542 23445677888899988776542 23455667888888888543
No 119
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.15 E-value=90 Score=19.19 Aligned_cols=48 Identities=8% Similarity=0.056 Sum_probs=33.5
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHH
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~ 98 (278)
++|++.. ......+.++..+||.|..+.+. |.-.|-..+++.++..+.
T Consensus 29 ~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 85 (114)
T 2cq4_A 29 FCMQLAA--RIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG 85 (114)
T ss_dssp EEESCCT--TCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHH
Confidence 4566643 23455678888999999888763 245677788888888773
No 120
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.99 E-value=64 Score=18.70 Aligned_cols=47 Identities=15% Similarity=0.245 Sum_probs=33.1
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc----CeeEEEecCHHHHHHH
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG----QVTTVVVSSASMAKAI 96 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~v~i~dp~~~~~i 96 (278)
-++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.++.+
T Consensus 8 l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~ 58 (88)
T 1wf0_A 8 VFVGRCTG--DMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 58 (88)
T ss_dssp EEEESCCS--SSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHT
T ss_pred EEEeCCCC--CCCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHH
Confidence 34566653 23456677888999999888764 4567778898888754
No 121
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=31.92 E-value=75 Score=18.20 Aligned_cols=50 Identities=16% Similarity=0.100 Sum_probs=34.7
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 9 l~v~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 9 VFVGDLSP--EITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 35566653 24456678888999998887652 2346677899999988853
No 122
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.76 E-value=89 Score=19.03 Aligned_cols=51 Identities=10% Similarity=0.098 Sum_probs=37.3
Q ss_pred CCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHH
Q 039787 46 PYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 46 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~ 98 (278)
..-++|++.. .-....+.++..+||.|..+.+. |.-.|-..+++.+...+.
T Consensus 16 ~~l~V~nLp~--~~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 16 RVLHIRKLPG--EVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp SEEEEESCCT--TCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3456777763 34455678888999999888753 467788889998888875
No 123
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.62 E-value=63 Score=19.57 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHh
Q 039787 62 KSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 62 ~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~ 99 (278)
..+.+...+||.|..+++ .++-.|...|.+.+..++.-
T Consensus 30 ~~L~~~F~~~G~Vi~vr~~~d~~fVtF~d~~sAlaAi~m 68 (91)
T 2dnr_A 30 DELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSL 68 (91)
T ss_dssp HHHHHHHHTTCCEEEEEECSSSEEEEESSHHHHHHGGGG
T ss_pred HHHHHHHHhCCCeEEEEEecCCEEEEECChHHHHHHHhc
Confidence 445566677999999986 45667777788888777753
No 124
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.61 E-value=86 Score=18.80 Aligned_cols=56 Identities=20% Similarity=0.076 Sum_probs=38.4
Q ss_pred CCCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc-------CeeEEEecCHHHHHHHHHh
Q 039787 42 PGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 42 pgp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~dp~~~~~i~~~ 99 (278)
+.+...-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.+...+..
T Consensus 12 ~~~~~~l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 12 RYQVVNLYVKNLDD--GIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp CSSCCCEEEECCCT--TCCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 33444556777753 23445677888899998888654 2356777899999988863
No 125
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=31.43 E-value=1e+02 Score=19.50 Aligned_cols=48 Identities=15% Similarity=0.086 Sum_probs=35.0
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++ ......+.++..+||+|..+.+. |.-.|...+++.+...+..
T Consensus 42 lfVgnl----~~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 42 LYVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp EEEECS----SCCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEEcCC----CCCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 456663 34456778888999998877664 5567778899988888743
No 126
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=31.40 E-value=87 Score=18.82 Aligned_cols=51 Identities=14% Similarity=0.078 Sum_probs=37.6
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc-CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 13 ~l~V~nl~~--~~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 13 VLFVRNLAN--TVTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp CEEEECCCT--TCCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 445677753 24456678888999999888763 4667788899999998863
No 127
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.33 E-value=77 Score=19.60 Aligned_cols=49 Identities=20% Similarity=0.169 Sum_probs=34.7
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
++|++.. ......+.++..+||+|..+.+. |.-.|...+++.++.++..
T Consensus 31 ~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~ 88 (116)
T 1x4b_A 31 FIGGLSF--ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 88 (116)
T ss_dssp EEECCTT--CCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTS
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHh
Confidence 5566643 24456678888999998777652 2456777899999999854
No 128
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=31.27 E-value=1.1e+02 Score=20.09 Aligned_cols=50 Identities=20% Similarity=0.245 Sum_probs=34.6
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHhc
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQNH 100 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~~ 100 (278)
++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.+..++..+
T Consensus 91 ~V~nlp~--~~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 149 (167)
T 2cjk_A 91 FVGGIGP--DVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNK 149 (167)
T ss_dssp EEEEECT--TCCHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHCS
T ss_pred EECCCCC--CCCHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhCC
Confidence 4455542 23456678888899998887653 24567788999999988643
No 129
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=31.21 E-value=97 Score=19.29 Aligned_cols=56 Identities=21% Similarity=0.271 Sum_probs=38.3
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc--------CeeEEEecCHHHHHHHHHh-cCCCCC
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG--------QVTTVVVSSASMAKAILQN-HDSSFC 105 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~dp~~~~~i~~~-~~~~~~ 105 (278)
-++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.++.++.. +...+.
T Consensus 10 l~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~ 74 (116)
T 2fy1_A 10 LFIGGLNR--ETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLH 74 (116)
T ss_dssp EEEECCTT--TCCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCS
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 45566653 24456678888999998887653 3567778899999998864 333343
No 130
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=31.01 E-value=1.3e+02 Score=20.58 Aligned_cols=49 Identities=10% Similarity=0.072 Sum_probs=35.0
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc-----CeeEEEecCHHHHHHHHHh
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-----QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-----~~~~v~i~dp~~~~~i~~~ 99 (278)
++||+.. .-....++++..+||.|.++.+. +.-.|-..|++.+......
T Consensus 50 ~VgNL~~--~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCS--CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 3566642 34456678889999999888763 2467788899988888753
No 131
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=30.94 E-value=87 Score=18.67 Aligned_cols=47 Identities=19% Similarity=0.225 Sum_probs=33.6
Q ss_pred eeccccCCCCchHHHHHHHHHhCCceEEecc----CeeEEEecCHHHHHHHHH
Q 039787 50 IGNLLELGDKPHKSLAKLAKIHGPIMTLKFG----QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 50 ~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~v~i~dp~~~~~i~~ 98 (278)
+|++.. ......+.++..+||+|..+.+. +.-.|-..+++.+...+.
T Consensus 5 V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~ 55 (101)
T 2hvz_A 5 VGNLGT--GAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 55 (101)
T ss_dssp EECCCS--SCSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHH
T ss_pred EeCCCC--CCCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHH
Confidence 455542 23455678888999998887652 456777889999998885
No 132
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=30.91 E-value=86 Score=18.58 Aligned_cols=50 Identities=20% Similarity=0.210 Sum_probs=35.9
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++.. .-....+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 11 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 11 LFVRNLSY--TSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp EEEECCCT--TCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 45566653 23455678888999999888763 3467788899999998843
No 133
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=30.67 E-value=73 Score=19.62 Aligned_cols=51 Identities=12% Similarity=0.024 Sum_probs=34.8
Q ss_pred CCeeeccccCCCCchHHHH---HHHHHhCCceEEecc------------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLA---KLAKIHGPIMTLKFG------------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~---~~~~~yG~i~~~~~~------------~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++..- ...+.+. ++..+||+|..+.+. |.-.|...+++.++..+..
T Consensus 17 ~l~V~nLp~~--~~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~ 82 (111)
T 2cpi_A 17 LVFVVGLSQR--LADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQC 82 (111)
T ss_dssp CEEEEEECTT--TCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHH
Confidence 4566777542 2334455 777899998887653 2456777899999888864
No 134
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=30.33 E-value=84 Score=18.27 Aligned_cols=50 Identities=18% Similarity=0.090 Sum_probs=35.2
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc-------CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 11 l~V~nlp~--~~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 11 IFVRNLPF--DFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EEECSCCT--TCCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 45566653 34556678888999998887653 3356677899999888753
No 135
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=29.71 E-value=94 Score=18.66 Aligned_cols=50 Identities=20% Similarity=0.175 Sum_probs=35.7
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc--------CeeEEEecCHHHHHHHHH
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG--------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~dp~~~~~i~~ 98 (278)
.-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 17 ~l~v~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~ 74 (105)
T 2dnh_A 17 KLFVGMLNK--QQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 74 (105)
T ss_dssp EEEEESCCT--TCCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHH
Confidence 445677753 23456678888999998888653 335677789999988885
No 136
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.41 E-value=88 Score=18.25 Aligned_cols=52 Identities=12% Similarity=0.117 Sum_probs=37.0
Q ss_pred CCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 46 PYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 46 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
..-+++++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 17 ~~l~V~nlp~--~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 77 (94)
T 2e5h_A 17 STVYVSNLPF--SLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA 77 (94)
T ss_dssp TSEEEESCCT--TSCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCC--CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3456677753 34456678888999999888763 2457788899999888853
No 137
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=29.37 E-value=1e+02 Score=18.89 Aligned_cols=49 Identities=18% Similarity=0.202 Sum_probs=35.1
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHH
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~ 98 (278)
-++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.+..++.
T Consensus 29 l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~ 86 (108)
T 2jrs_A 29 LYVGSLHF--NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 86 (108)
T ss_dssp EEEECCCS--SCCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 45676653 34556678888999998877653 245677889999999885
No 138
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=29.07 E-value=1.2e+02 Score=19.70 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=34.3
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEeccC-----eeEEEecCHHHHHHHHH
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQ-----VTTVVVSSASMAKAILQ 98 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~-----~~~v~i~dp~~~~~i~~ 98 (278)
++||+.. .-....+.++..+||.|.++.+.. .-.|-..+++.++....
T Consensus 32 ~V~NL~~--~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~ 84 (130)
T 3zzy_A 32 IVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 84 (130)
T ss_dssp EEESCCS--CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHH
T ss_pred EECCCCC--CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHH
Confidence 4677742 344556788899999988887532 36788889888888774
No 139
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.06 E-value=1e+02 Score=18.78 Aligned_cols=51 Identities=14% Similarity=0.109 Sum_probs=37.1
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.+...+..
T Consensus 27 ~l~V~nl~~--~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 27 TVYCGGIAS--GLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp EEEEECCSS--CCCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 345677653 34456678888999999888763 5677888899999888743
No 140
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.97 E-value=94 Score=18.40 Aligned_cols=49 Identities=14% Similarity=0.071 Sum_probs=36.3
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++ ......+.++..+||+|..+.++ +.-.|-..+++.+...+..
T Consensus 17 ~l~V~n~----~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 17 TLYVYGE----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp EEEEECS----SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEcCC----CCCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 3456763 34456688888999999888764 4567778899999988854
No 141
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=28.33 E-value=93 Score=18.19 Aligned_cols=49 Identities=16% Similarity=0.182 Sum_probs=34.8
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc--------CeeEEEecCHHHHHHHHH
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG--------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~dp~~~~~i~~ 98 (278)
-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 19 l~v~nlp~--~~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 19 VFVGNLEA--RVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp EEEECCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred EEEECCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 45566653 24456678888999999888653 235677789999988885
No 142
>1b35_D CRPV, protein (cricket paralysis virus, VP4); insect picorna-like virus, icosahedral virus; 2.40A {Cricket paralysis virus} SCOP: b.121.4.1
Probab=28.15 E-value=39 Score=17.50 Aligned_cols=28 Identities=32% Similarity=0.474 Sum_probs=16.2
Q ss_pred CCCCeeeccccCCCCchHHHHHHHHHhC
Q 039787 45 TPYPVIGNLLELGDKPHKSLAKLAKIHG 72 (278)
Q Consensus 45 ~~~p~~g~~~~~~~~~~~~~~~~~~~yG 72 (278)
..+|++||.+.-.........++.+-+|
T Consensus 29 s~ipilgn~fs~pawisa~~~~~~k~~g 56 (57)
T 1b35_D 29 SHIPVLGNIFSTPAWISAKAADLAKLFG 56 (57)
T ss_dssp TCCCCSCCSSSSCTTCCCCHHHHHHHTT
T ss_pred hccccccccccchHHHHHHHHHHHHHhC
Confidence 3479999987654444444444444443
No 143
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.95 E-value=1.2e+02 Score=19.10 Aligned_cols=54 Identities=17% Similarity=0.100 Sum_probs=37.9
Q ss_pred CCCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHH
Q 039787 44 PTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 44 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~ 98 (278)
|...-++||+..- +.....+.++..+||.|..+.+. +.-.|-..+++.+...+.
T Consensus 24 p~~~l~V~NLp~~-~~te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 24 LGRVIHLSNLPHS-GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp CCCEEEEESCCCS-SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEeCCCCc-cCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 3345567777531 13445677888999999888764 456777889998888875
No 144
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=27.86 E-value=1.1e+02 Score=18.88 Aligned_cols=49 Identities=16% Similarity=0.124 Sum_probs=33.7
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
++|++.. ....+.+.++..+||+|..+.+. |.-.|...+++.++..+..
T Consensus 44 ~V~nlp~--~~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 101 (118)
T 2khc_A 44 FIYHLPQ--EFTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKA 101 (118)
T ss_dssp EEECSCT--TCCHHHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 4455542 23456678888899998888653 2356777888988888854
No 145
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.82 E-value=1e+02 Score=18.43 Aligned_cols=50 Identities=14% Similarity=0.255 Sum_probs=34.3
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 11 l~V~nlp~--~~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 11 VFVGNIPY--EATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp EEEESCCT--TSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred EEEeCCCC--cCCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 34566642 23455678888999998777653 2346677899999998853
No 146
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.73 E-value=1e+02 Score=18.34 Aligned_cols=52 Identities=19% Similarity=0.213 Sum_probs=36.6
Q ss_pred CCCeeeccccCCCCchHHHHHHHHHhCCceEEecc--------CeeEEEecCHHHHHHHHHh
Q 039787 46 PYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG--------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 46 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~dp~~~~~i~~~ 99 (278)
..-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 18 ~~l~v~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 18 HKLFISGLPF--SCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp SCEEEESCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCC--CCCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 3455677653 24456678888999998887653 3456778899999988854
No 147
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=27.70 E-value=98 Score=18.22 Aligned_cols=49 Identities=16% Similarity=0.316 Sum_probs=34.8
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 6 ~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 63 (96)
T 2x1f_A 6 YLGSIPY--DQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRN 63 (96)
T ss_dssp EEESCCT--TCCHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHHH
T ss_pred EEECCCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4566542 23456678888999999888762 3457778899999988853
No 148
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.44 E-value=1e+02 Score=18.41 Aligned_cols=50 Identities=24% Similarity=0.151 Sum_probs=36.1
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc-------CeeEEEecCHHHHHHHHH
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~dp~~~~~i~~ 98 (278)
.-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 17 ~l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 17 TLYVGNLSR--DVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp EEEEESCCT--TCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCc--cCCHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 445677653 24456678888999999887653 345777889999988885
No 149
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.36 E-value=1e+02 Score=18.25 Aligned_cols=52 Identities=13% Similarity=0.103 Sum_probs=35.8
Q ss_pred CCCeeeccccCCCCchHHHHHHHHHhCCce-EEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 46 PYPVIGNLLELGDKPHKSLAKLAKIHGPIM-TLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 46 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~-~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
..-++|++.. .-....+.++..+||+|. .+.+. +.-.|-..+++.++..+..
T Consensus 10 ~~l~V~nLp~--~~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 71 (99)
T 2div_A 10 ASLWMGDLEP--YMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 71 (99)
T ss_dssp SEEEECSCCT--TCCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHHT
T ss_pred cEEEEeCCCC--CCCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHHH
Confidence 3445677753 244566788889999988 76542 2346677899999998853
No 150
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=27.34 E-value=1.1e+02 Score=18.72 Aligned_cols=45 Identities=13% Similarity=0.147 Sum_probs=30.6
Q ss_pred HHHHHHHHHhCCceEEecc-----------CeeEEEecCHHHHHHHHHh-cCCCCCC
Q 039787 62 KSLAKLAKIHGPIMTLKFG-----------QVTTVVVSSASMAKAILQN-HDSSFCN 106 (278)
Q Consensus 62 ~~~~~~~~~yG~i~~~~~~-----------~~~~v~i~dp~~~~~i~~~-~~~~~~~ 106 (278)
.-+++...+||+|..+.+. |.-.|-..+++.+...+.. +...|..
T Consensus 30 ~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~G 86 (105)
T 3v4m_A 30 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFAN 86 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred HHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCC
Confidence 3466677899999988763 3456777899888877743 3444433
No 151
>3md3_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNP, RBD, poly(U) binding, tandem, acetylation, cytopla nucleus; 2.70A {Saccharomyces cerevisiae}
Probab=27.31 E-value=1.3e+02 Score=19.61 Aligned_cols=47 Identities=26% Similarity=0.311 Sum_probs=33.5
Q ss_pred eeccccCCCCchHHHHHHHHHhCCceEEecc--------CeeEEEecCHHHHHHHHH
Q 039787 50 IGNLLELGDKPHKSLAKLAKIHGPIMTLKFG--------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 50 ~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~dp~~~~~i~~ 98 (278)
+|++.. .-....+.++.++||+|..+.+. |.-.|-..+++.+...+.
T Consensus 5 V~nlp~--~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~g~afV~f~~~~~a~~A~~ 59 (166)
T 3md3_A 5 VGNLDK--AITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQ 59 (166)
T ss_dssp EEEEET--TCCHHHHHHHHGGGSCEEEEEEECCCC-CCEEEEEEEESSHHHHHHHHH
T ss_pred ECCCCC--cCCHHHHHHHHHhcCCeEEEEEEECCCCCCCCEEEEEeCCHHHHHHHHH
Confidence 455542 23455678888999999888762 346777889999998884
No 152
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=27.19 E-value=1.7e+02 Score=23.65 Aligned_cols=51 Identities=10% Similarity=0.126 Sum_probs=36.5
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++||+.. ......+.++..+||+|..+.+. |.-+|...+++.+..++..
T Consensus 104 ~lfV~nL~~--~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 104 TLFVARVNY--DTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred EEEEeCCCC--CCCHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 456677753 23455678888999999888662 3467788899999888854
No 153
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=26.80 E-value=80 Score=19.53 Aligned_cols=41 Identities=17% Similarity=0.109 Sum_probs=30.1
Q ss_pred CchHHHHHHHHHhCCceEEeccC-eeEEEecCHHHHHHHHHh
Q 039787 59 KPHKSLAKLAKIHGPIMTLKFGQ-VTTVVVSSASMAKAILQN 99 (278)
Q Consensus 59 ~~~~~~~~~~~~yG~i~~~~~~~-~~~v~i~dp~~~~~i~~~ 99 (278)
.-..-+.++...||.+.--|+-. .-.+++.+|+.+++++..
T Consensus 17 wKt~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 58 (101)
T 3ctr_A 17 WKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNT 58 (101)
T ss_dssp CCHHHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred hhhHHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 34456777888899665556654 467788999999999963
No 154
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=26.64 E-value=1.7e+02 Score=20.76 Aligned_cols=57 Identities=16% Similarity=0.141 Sum_probs=39.6
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc----CeeEEEecCHHHHHHHHH-hcCCCCC
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG----QVTTVVVSSASMAKAILQ-NHDSSFC 105 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~v~i~dp~~~~~i~~-~~~~~~~ 105 (278)
-++|++... .-....+.++..+||+|..+.+. |.-.|-..+++.++..+. -+...+.
T Consensus 37 l~V~nLp~~-~~te~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~~l~g~~~~ 98 (229)
T 2adc_A 37 LLVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLH 98 (229)
T ss_dssp EEEESCCTT-TCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCS
T ss_pred EEEeCCCcc-cCCHHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHHHhCCCeEC
Confidence 456777531 23446678888999999888764 557888899999999885 3344443
No 155
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.60 E-value=99 Score=17.91 Aligned_cols=50 Identities=16% Similarity=0.250 Sum_probs=36.9
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHH
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~ 98 (278)
.-++|++.. ......+.++..+||+|..+.+ -+.-.|-..+++.++..+.
T Consensus 10 ~l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~ 60 (90)
T 2dnq_A 10 KLFIGNLPR--EATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIR 60 (90)
T ss_dssp EEEEESCCS--SCCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHH
Confidence 345677653 2445667888899999988875 3567778889999998884
No 156
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=26.40 E-value=1.5e+02 Score=20.08 Aligned_cols=52 Identities=15% Similarity=0.108 Sum_probs=37.2
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHhc
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQNH 100 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~~ 100 (278)
.-++|++.. ......+.++..+||+|..+.+. |.-.|...+++.+...+..+
T Consensus 15 ~l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~ 75 (196)
T 1l3k_A 15 KLFIGGLSF--ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 75 (196)
T ss_dssp EEEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTC
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcC
Confidence 345677753 34456678889999998777642 24578888999999998653
No 157
>2qgu_A Probable signal peptide protein; NESG, RSR89, Q8XV73, structural genomics, PSI-2, protein STR initiative; HET: MSE PEF; 1.50A {Ralstonia solanacearum}
Probab=26.33 E-value=1.8e+02 Score=20.75 Aligned_cols=64 Identities=11% Similarity=0.102 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHh--ccCCCccchHHHHHHH-----HHHHHHHHHhcccc---cCccHHHHHHHHHHHHH
Q 039787 154 DIRRKKIKHLLAYVEEN--CRVGQAIVIGQAVFNT-----SLNVLSNTIFSVDL---VDPTAREFKDIVWGIMT 217 (278)
Q Consensus 154 ~~~~~~~~~l~~~~~~~--~~~~~~vd~~~~~~~~-----~~~vi~~~~fG~~~---~~~~~~~~~~~~~~~~~ 217 (278)
..+.+.++++++.+... ...+.+-.+...+... =++.+++.++|... +.+..++|.+.+.+.+.
T Consensus 33 ~~V~~~~~~vl~~lk~~~~~~~~~~~~~~~~v~~~l~p~~D~~~~a~~vLG~~wr~at~~Qr~~F~~~F~~~L~ 106 (211)
T 2qgu_A 33 ATVKTAVDDVLATIKGDPDLRGGNLQKVFQLVDQKIVPRADFKRTTQIAMGRFWSQATPEQQQQIQDGFKSLLI 106 (211)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHTTCHHHHHHHHHHHTGGGBCHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCccccccCHHHHHHHHHHHhhhhcCHHHHHHHHHhHhHhhCCHHHHHHHHHHHHHHHH
Confidence 46677777777777531 1123333344444443 37788999999877 33445667776666544
No 158
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=26.13 E-value=99 Score=17.74 Aligned_cols=48 Identities=13% Similarity=0.099 Sum_probs=32.0
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHH
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~ 98 (278)
++|++.. ......+.++..+||+|..+.+. |.-.|-..+++.++..+.
T Consensus 10 ~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 66 (89)
T 3ucg_A 10 YVGNVDY--GATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLA 66 (89)
T ss_dssp EEESCCT--TCCHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGG
T ss_pred EEeCCCC--CCCHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHh
Confidence 3455532 23455678888999998877652 135677778888888873
No 159
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=26.03 E-value=96 Score=17.58 Aligned_cols=50 Identities=22% Similarity=0.179 Sum_probs=35.6
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHH
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~ 98 (278)
.-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 9 ~l~V~nl~~--~~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 67 (85)
T 3mdf_A 9 VLYVGGLAE--EVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 67 (85)
T ss_dssp EEEEECCCT--TCCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred EEEEECCCC--CCCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHH
Confidence 445667653 23456678888999999888752 235777889999988874
No 160
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.47 E-value=1.1e+02 Score=18.09 Aligned_cols=57 Identities=9% Similarity=0.078 Sum_probs=38.9
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHhcCCCCC
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQNHDSSFC 105 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~~~~~~~ 105 (278)
.-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+.-+...+.
T Consensus 12 ~l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~ 77 (99)
T 2dgs_A 12 KIFVGGIPH--NCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIM 77 (99)
T ss_dssp EEEEESCCS--SCCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSS
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEEC
Confidence 345677653 24455678888999999888762 3457778899999998864444443
No 161
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=25.44 E-value=1.1e+02 Score=18.15 Aligned_cols=51 Identities=16% Similarity=0.227 Sum_probs=36.8
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc-CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++..- ......+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 25 l~V~nLp~~-~~t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 25 LFIGNLPLK-NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp EEEESCCSS-CCCHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCcc-cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 356776520 23456678888999999888763 5667788899999988853
No 162
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=25.36 E-value=1.3e+02 Score=18.95 Aligned_cols=64 Identities=17% Similarity=0.161 Sum_probs=39.6
Q ss_pred CCCCCeeeccccC---CCCchHHHHHHHHHhCCceEEecc-------------CeeEEEecCHHHHHHHHHh-cCCCCCC
Q 039787 44 PTPYPVIGNLLEL---GDKPHKSLAKLAKIHGPIMTLKFG-------------QVTTVVVSSASMAKAILQN-HDSSFCN 106 (278)
Q Consensus 44 p~~~p~~g~~~~~---~~~~~~~~~~~~~~yG~i~~~~~~-------------~~~~v~i~dp~~~~~i~~~-~~~~~~~ 106 (278)
|...-++.|+..- ..+...-+.+...+||+|..+.+. |.-.|-..+++.+...... +...|..
T Consensus 19 ps~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~G 98 (118)
T 3ue2_A 19 ESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAG 98 (118)
T ss_dssp SCCEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECC
Confidence 3345556666433 345566777778899998887653 2235666788888877643 4444444
Q ss_pred C
Q 039787 107 R 107 (278)
Q Consensus 107 ~ 107 (278)
|
T Consensus 99 R 99 (118)
T 3ue2_A 99 R 99 (118)
T ss_dssp E
T ss_pred c
Confidence 3
No 163
>1u6f_A Tcubp1, RNA-binding protein UBP1; trypanosome, mRNA-binding protein, GU-rich RNA, structure; NMR {Trypanosoma cruzi} SCOP: d.58.7.1
Probab=25.32 E-value=1.4e+02 Score=19.13 Aligned_cols=49 Identities=20% Similarity=0.207 Sum_probs=34.4
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
++|++.. .-....+.++..+||+|..+.+. |.-.|...+++.+..++..
T Consensus 46 ~V~nLp~--~~~~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 103 (139)
T 1u6f_A 46 MVNYIPT--TVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAG 103 (139)
T ss_dssp EEESCST--TCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 4566643 23455678888999998887652 2356777899999998864
No 164
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.93 E-value=1.1e+02 Score=18.01 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=34.1
Q ss_pred CeeeccccCCCCchHHHH----HHHHHhCCceEEecc------CeeEEEecCHHHHHHHHH
Q 039787 48 PVIGNLLELGDKPHKSLA----KLAKIHGPIMTLKFG------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~----~~~~~yG~i~~~~~~------~~~~v~i~dp~~~~~i~~ 98 (278)
-++|++..- .....+. ++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 12 l~V~nL~~~--~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~ 70 (96)
T 2dgx_A 12 VQVSNIDYR--LSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN 70 (96)
T ss_dssp EEEESCCTT--SCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred EEEECCCCC--CCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence 456777532 2233344 888999999888764 346777889999988875
No 165
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=24.92 E-value=1e+02 Score=17.39 Aligned_cols=48 Identities=15% Similarity=0.104 Sum_probs=32.7
Q ss_pred eeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 50 IGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 50 ~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
+|++.. ......+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 6 V~nlp~--~~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 6 VGDLNV--NVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp EECCCT--TCCHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EeCCCC--CCCHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 455532 23445677888899998887652 2356778899999988853
No 166
>2xs2_A Deleted in azoospermia-like; RNA binding protein-RNA complex; 1.35A {Mus musculus} PDB: 2xs7_A 2xs5_A 2xsf_A
Probab=24.60 E-value=73 Score=19.07 Aligned_cols=49 Identities=10% Similarity=0.078 Sum_probs=33.3
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc--------CeeEEEecCHHHHHHHHH
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG--------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~dp~~~~~i~~ 98 (278)
-++|++.. ......+.++..+||+|..+.+. |.-.|...+++.++..+.
T Consensus 12 l~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~Ai~ 68 (102)
T 2xs2_A 12 VFVGGIDV--RMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIVE 68 (102)
T ss_dssp EEEECCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSCCCHHHHTT
T ss_pred EEEeCCCC--CCCHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHh
Confidence 34566642 23455678888999998887652 334566778888888875
No 167
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.29 E-value=1.2e+02 Score=18.09 Aligned_cols=51 Identities=12% Similarity=0.065 Sum_probs=36.6
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc-------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++.. ......+.++..+||+|..+.+. +.-.|...+++.++..+..
T Consensus 17 ~l~V~nlp~--~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 17 RLHVSNIPF--RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp EEEEESCCT--TCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 445677753 24455678888999999888763 3567778899999998853
No 168
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.29 E-value=1.2e+02 Score=18.15 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=35.5
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHhc
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQNH 100 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~~ 100 (278)
-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++.++..+
T Consensus 19 l~V~nlp~--~~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~ 78 (105)
T 2dh8_A 19 LFVGGLDW--STTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 78 (105)
T ss_dssp ECCBSCCT--TCCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHC
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhC
Confidence 44566643 24456678888999998877652 23467778999999988653
No 169
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.14 E-value=1.1e+02 Score=17.67 Aligned_cols=53 Identities=19% Similarity=0.167 Sum_probs=38.5
Q ss_pred CCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc-CeeEEEecCHHHHHHHHHh
Q 039787 45 TPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 45 ~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~i~dp~~~~~i~~~ 99 (278)
...-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 9 ~~~l~V~nlp~--~~t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~ 62 (90)
T 2dnp_A 9 TWKIFVGNVSA--ACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQ 62 (90)
T ss_dssp SCCEEEESCCT--TCCHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHH
T ss_pred CCEEEEeCCCC--CCCHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 33456677753 34456678888999999888763 4667778899999888753
No 170
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=23.87 E-value=1.3e+02 Score=18.49 Aligned_cols=41 Identities=15% Similarity=0.113 Sum_probs=30.9
Q ss_pred CCchHHHHHHHHHhCCceEEeccC-eeEEEecCHHHHHHHHH
Q 039787 58 DKPHKSLAKLAKIHGPIMTLKFGQ-VTTVVVSSASMAKAILQ 98 (278)
Q Consensus 58 ~~~~~~~~~~~~~yG~i~~~~~~~-~~~v~i~dp~~~~~i~~ 98 (278)
..-..-+.++...||.+.--|+-. .-.+++.+|+.+++++.
T Consensus 26 ewKt~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~ 67 (100)
T 1whv_A 26 EWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVN 67 (100)
T ss_dssp TCCHHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred hhhhHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence 344556778888999766556654 46778899999999986
No 171
>3cra_A Protein MAZG; tandem-repeat domain, hydrolase; 2.10A {Escherichia coli} PDB: 3crc_A*
Probab=23.82 E-value=2.3e+02 Score=21.18 Aligned_cols=45 Identities=4% Similarity=-0.079 Sum_probs=26.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHhcc
Q 039787 150 DANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSV 198 (278)
Q Consensus 150 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~ 198 (278)
.++.+.+.+++.++++.+. .+..-++.+.+..+.+.|+..+-.+.
T Consensus 32 ~Sl~~yl~eE~~Ev~daI~----~~d~~~l~eELGDvLlqVvf~a~ia~ 76 (265)
T 3cra_A 32 ATIAPYTLEETYEVLDAIA----REDFDDLRGELGDLLFQVVFYAQMAQ 76 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455666777777777765 23344566666666666665555554
No 172
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=23.78 E-value=1.3e+02 Score=18.14 Aligned_cols=50 Identities=12% Similarity=0.087 Sum_probs=34.6
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCCceEEecc--------CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG--------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~--------~~~~v~i~dp~~~~~i~~~ 99 (278)
-+++++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 32 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 32 LLVSNLDF--GVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEEESCCT--TCCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 45566643 23455678888999999877653 2356677799999888863
No 173
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=23.67 E-value=1.3e+02 Score=18.34 Aligned_cols=51 Identities=14% Similarity=0.078 Sum_probs=36.6
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++.. ......+.++..+||+|..+.+. |.-.|...+++.++..+..
T Consensus 27 ~lfV~nLp~--~~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~ 86 (109)
T 2rs2_A 27 KMFIGGLSW--QTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 86 (109)
T ss_dssp CEEEESCCT--TCCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHS
T ss_pred EEEEeCCCC--CCCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 345677653 34455678888999999888653 2457888899999998854
No 174
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=23.64 E-value=1.3e+02 Score=18.37 Aligned_cols=53 Identities=17% Similarity=0.158 Sum_probs=38.7
Q ss_pred CCCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHH
Q 039787 44 PTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 44 p~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~ 98 (278)
|...-++||+.. ......+.++..+||+|..+.+. |.-.|-..+.+.++..+.
T Consensus 20 ps~~l~V~NLp~--~~te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~ 75 (100)
T 3r27_A 20 ASPVVHIRGLID--GVVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVN 75 (100)
T ss_dssp CCSEEEEESCCT--TCCHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCcEEEEeCCCC--CCCHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 334566788763 34456678889999999887653 567888889998888874
No 175
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=23.53 E-value=1.3e+02 Score=18.36 Aligned_cols=51 Identities=14% Similarity=0.072 Sum_probs=36.0
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++.. ......+.++..+||+|..+.+. +.-.|...+++.++..+..
T Consensus 17 ~l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (115)
T 2dgo_A 17 HVFVGDLSP--EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 76 (115)
T ss_dssp EEEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 345677653 24456678888999998887652 2346777899999998853
No 176
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=23.50 E-value=1.3e+02 Score=18.33 Aligned_cols=49 Identities=16% Similarity=0.218 Sum_probs=35.6
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEec-cCeeEEEecCHHHHHHHHHh
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKF-GQVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~-~~~~~v~i~dp~~~~~i~~~ 99 (278)
++|++.. ......+.++..+||+|..+.+ -|.-.|...+++.+...+..
T Consensus 35 ~V~nLp~--~~t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 35 FVRPFPL--DVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp EECSSCT--TCCHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHH
T ss_pred EEECCCC--CCCHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 4566642 2345567888899999888765 46677888899999888853
No 177
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=23.35 E-value=1.2e+02 Score=17.76 Aligned_cols=51 Identities=22% Similarity=0.204 Sum_probs=35.6
Q ss_pred CCeeeccccCCCCchHHHH----HHHHHhCCceEEecc------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLA----KLAKIHGPIMTLKFG------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~----~~~~~yG~i~~~~~~------~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++..- .....+. ++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 10 ~l~V~nLp~~--~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 10 TIYINNLNEK--IKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEEEESCCTT--SCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 3456776532 2233344 888999999888654 5677888899999888853
No 178
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.33 E-value=1.2e+02 Score=17.82 Aligned_cols=52 Identities=19% Similarity=0.149 Sum_probs=37.3
Q ss_pred CCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHHh
Q 039787 46 PYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 46 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~~ 99 (278)
..-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 18 ~~l~V~nlp~--~~t~~~l~~~F~~~G~v~~v~~~~~~g~afV~f~~~~~A~~A~~~ 72 (97)
T 1why_A 18 TRLWVGGLGP--NTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAK 72 (97)
T ss_dssp SCEEEECCCS--SCCHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCC--CCCHHHHHHHHHhcCCeeEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3456677753 24456678888999999888763 3566777899999888753
No 179
>3fgx_A Rbstp2171; structural genomics, PSI-2, Pro structure initiative, midwest center for structural genomic structural genomics; 2.90A {Bacillus stearothermophilus}
Probab=23.11 E-value=52 Score=20.85 Aligned_cols=17 Identities=12% Similarity=0.321 Sum_probs=13.5
Q ss_pred HHHHHHHHhCCceEEec
Q 039787 63 SLAKLAKIHGPIMTLKF 79 (278)
Q Consensus 63 ~~~~~~~~yG~i~~~~~ 79 (278)
...++.+|||.+|++.+
T Consensus 9 ~~~~lk~kygk~y~v~~ 25 (114)
T 3fgx_A 9 NTDELKQKYGRVYEIRI 25 (114)
T ss_dssp CHHHHHHHHSSEEEEEE
T ss_pred cHHHHHHHhCceEEEEe
Confidence 35678899999998854
No 180
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.04 E-value=1.2e+02 Score=17.62 Aligned_cols=51 Identities=16% Similarity=0.160 Sum_probs=36.9
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc-CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.+...+..
T Consensus 12 ~l~V~nLp~--~~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~ 63 (92)
T 2dgt_A 12 KLHVGNISP--TCTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRG 63 (92)
T ss_dssp EEEEESCCS--SCCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 345677753 34556678888999999888764 4566778899999888853
No 181
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.92 E-value=1.2e+02 Score=17.77 Aligned_cols=51 Identities=18% Similarity=0.101 Sum_probs=36.1
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc------------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG------------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~------------~~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 7 ~l~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 7 GLFIKNLNF--STTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp CEEEESCCT--TCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 345677653 24456678888999998877653 2356777899999999864
No 182
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.64 E-value=1e+02 Score=18.48 Aligned_cols=51 Identities=18% Similarity=0.204 Sum_probs=35.2
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEeccC---------eeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQ---------VTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~---------~~~v~i~dp~~~~~i~~~ 99 (278)
.-++|++.. ......+.++..+||+|..+.+.. .-.|-..+++.++..+..
T Consensus 17 ~l~V~nlp~--~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (103)
T 2cq0_A 17 TIRVTNLSE--DTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAG 76 (103)
T ss_dssp EEEEESCCT--TCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhCCCeEEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 345677653 234456777788999988876531 346777899999998863
No 183
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=22.59 E-value=1.3e+02 Score=17.94 Aligned_cols=51 Identities=22% Similarity=0.232 Sum_probs=34.8
Q ss_pred CeeeccccCC----CCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHH
Q 039787 48 PVIGNLLELG----DKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 48 p~~g~~~~~~----~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~ 98 (278)
-++|+++... ......+.++..+||+|..+.+. |.-.|...+++.++..+.
T Consensus 9 vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 9 IVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp EEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 3456665421 12234567788899999888763 345788889999998885
No 184
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.57 E-value=1.4e+02 Score=18.22 Aligned_cols=51 Identities=18% Similarity=0.157 Sum_probs=37.4
Q ss_pred CCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---CeeEEEecCHHHHHHHHH
Q 039787 46 PYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 46 ~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---~~~~v~i~dp~~~~~i~~ 98 (278)
..-++|++.. .-....+.++..+||.|..+.+. +.-.|-..+.+.+...+.
T Consensus 16 ~~l~V~nLp~--~~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 16 PVVHVRGLCE--SVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp SEEEEESCCS--SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCC--CCCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3456677753 23456688889999999888753 457788889998888875
No 185
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.11 E-value=1.4e+02 Score=18.05 Aligned_cols=53 Identities=15% Similarity=0.130 Sum_probs=37.8
Q ss_pred CCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 45 TPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 45 ~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
...-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 15 ~~~l~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 15 GKTVFIRNLSF--DSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp CCCEEEESCCT--TCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred CCEEEEECCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 33456777753 24456678888999999888763 2456777899999998854
No 186
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.08 E-value=1.4e+02 Score=17.99 Aligned_cols=58 Identities=10% Similarity=0.112 Sum_probs=38.4
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceE-Eec--------cCeeEEEecCHHHHHHHHHhcCCCCCC
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMT-LKF--------GQVTTVVVSSASMAKAILQNHDSSFCN 106 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~-~~~--------~~~~~v~i~dp~~~~~i~~~~~~~~~~ 106 (278)
.-++|++.. ......+.++..+||.|.. +.+ -|.-.|-..+++.++..+..+...+..
T Consensus 17 ~l~V~nLp~--~~te~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~~~~~~g 83 (104)
T 1wg5_A 17 FVRLRGLPF--GCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGH 83 (104)
T ss_dssp EEEEESCCT--TCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSS
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCcchhCC
Confidence 345676653 3445667888889998754 433 245678888999999998664444433
No 187
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=22.01 E-value=2e+02 Score=19.87 Aligned_cols=49 Identities=14% Similarity=0.253 Sum_probs=35.6
Q ss_pred eeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 49 VIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 49 ~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
++|++.. .-....+.++..+||+|..+.+. |.-.|-..+++.++..+..
T Consensus 32 ~V~nLp~--~~t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 89 (216)
T 2qfj_A 32 YVGSIYY--ELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 89 (216)
T ss_dssp EEECCCT--TCCHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHHH
T ss_pred EEECCCC--CCCHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHHH
Confidence 4566543 23456678888999999888762 3467888899999999863
No 188
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=21.41 E-value=1.9e+02 Score=19.27 Aligned_cols=41 Identities=24% Similarity=0.400 Sum_probs=30.6
Q ss_pred CchHHHHHHHHHhC--CceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 59 KPHKSLAKLAKIHG--PIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 59 ~~~~~~~~~~~~yG--~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
.....+.++..+|| .|..+.+. |.-.|...+++.+...+..
T Consensus 67 ~te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~ 118 (156)
T 3n9u_C 67 TTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLEL 118 (156)
T ss_dssp CCHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 34456788889999 88887652 2357778899999998865
No 189
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.05 E-value=1.4e+02 Score=17.74 Aligned_cols=56 Identities=13% Similarity=0.054 Sum_probs=38.7
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh-cCCCC
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN-HDSSF 104 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~-~~~~~ 104 (278)
.-++|++.. ......+.++..+||+|..+.+. +.-.|-..+++.++.++.. +...+
T Consensus 15 ~l~V~nLp~--~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~ 80 (103)
T 2dnm_A 15 TLKVDNLTY--RTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAEL 80 (103)
T ss_dssp EEEEESCCT--TCCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCB
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEE
Confidence 345677753 24456678888999999888763 3457778899999888863 33333
No 190
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.86 E-value=1.5e+02 Score=17.77 Aligned_cols=53 Identities=15% Similarity=0.159 Sum_probs=36.0
Q ss_pred CCCCCCeeeccccCCCCchHHHHHHHHHhCCceEEecc----------CeeEEEecCHHHHHHHHH
Q 039787 43 GPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG----------QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 43 gp~~~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----------~~~~v~i~dp~~~~~i~~ 98 (278)
.|...-++|++.. ......+.++..+|| |..+.+. +.-.|-..+++.++..+.
T Consensus 13 ~~~~~l~V~nlp~--~~t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (104)
T 1wi8_A 13 SPPYTAFLGNLPY--DVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALS 75 (104)
T ss_dssp SSCEEEEEESCCS--SCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHG
T ss_pred CCCCEEEEeCCCC--cCCHHHHHHHHHHCC-ceEEEEecCCCCCCCcCeEEEEEECCHHHHHHHHh
Confidence 3333445677753 234556778888999 8888753 235677889999999883
No 191
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.79 E-value=1.4e+02 Score=17.72 Aligned_cols=56 Identities=18% Similarity=0.059 Sum_probs=38.6
Q ss_pred CCCCCCCeeeccccCCCCchHHHHHHHHH-hCCceEEecc--------CeeEEEecCHHHHHHHHHh
Q 039787 42 PGPTPYPVIGNLLELGDKPHKSLAKLAKI-HGPIMTLKFG--------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 42 pgp~~~p~~g~~~~~~~~~~~~~~~~~~~-yG~i~~~~~~--------~~~~v~i~dp~~~~~i~~~ 99 (278)
+.|...-++|++.. ......+.++..+ ||+|..+.+. +.-.|-..+++.+...+..
T Consensus 6 ~~~~~~l~V~nLp~--~~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 6 SGPEYSLFVGDLTP--DVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp SSCCCCEEEECCCT--TCCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCC--CCCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 34444556777763 2345567788888 9998887652 2356777899999998863
No 192
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.75 E-value=1.5e+02 Score=17.86 Aligned_cols=50 Identities=12% Similarity=0.043 Sum_probs=35.9
Q ss_pred CeeeccccCCCCchHHHHHHHHHhCC-ceEEecc----------CeeEEEecCHHHHHHHHHh
Q 039787 48 PVIGNLLELGDKPHKSLAKLAKIHGP-IMTLKFG----------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 48 p~~g~~~~~~~~~~~~~~~~~~~yG~-i~~~~~~----------~~~~v~i~dp~~~~~i~~~ 99 (278)
-++|++.. ......+.++..+||+ |..+.+. |.-.|-..+++.+...+..
T Consensus 11 l~V~nLp~--~~t~~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 71 (109)
T 2dis_A 11 LFIGGIPK--MKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRK 71 (109)
T ss_dssp EEEECCCT--TSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTT
T ss_pred EEEeCCCC--cCCHHHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHH
Confidence 45676653 3445667888899998 8887664 3467778899999998853
No 193
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=20.73 E-value=2.2e+02 Score=19.90 Aligned_cols=51 Identities=10% Similarity=0.075 Sum_probs=36.9
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc----CeeEEEecCHHHHHHHHH
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG----QVTTVVVSSASMAKAILQ 98 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~----~~~~v~i~dp~~~~~i~~ 98 (278)
.-++||+... .-....+.++..+||+|..+.+. |.-.|...+++.++..+.
T Consensus 6 ~l~V~nL~~~-~~~~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~ 60 (205)
T 3tyt_A 6 VLMVYGLDQS-KMNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAIT 60 (205)
T ss_dssp EEEEECCCTT-TCCHHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCcc-cCCHHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHH
Confidence 3456777511 12344677888999999998763 567888899999988875
No 194
>2ghp_A U4/U6 snRNA-associated splicing factor PRP24; RNA chaperone, RNA binding domain, RNA recognition motif, SP factor, snRNP, spliceosome; 2.70A {Saccharomyces cerevisiae} SCOP: d.58.7.1 d.58.7.1 d.58.7.1 PDB: 2go9_A 2kh9_A
Probab=20.44 E-value=1.8e+02 Score=21.57 Aligned_cols=56 Identities=16% Similarity=0.202 Sum_probs=39.0
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc-------CeeEEEecCHHHHHHHHHhcCCCC
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG-------QVTTVVVSSASMAKAILQNHDSSF 104 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~-------~~~~v~i~dp~~~~~i~~~~~~~~ 104 (278)
.-++|++.. .-....+.++..+||+|..+.+. |.-.|...+++.++..+..+...+
T Consensus 43 ~l~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~A~~A~~~~~~~~ 105 (292)
T 2ghp_A 43 TVLVKNLPK--SYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAITKTHKVV 105 (292)
T ss_dssp EEEEEEECT--TCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHTTTTCEE
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEECCCCCcEEEEEEECCHHHHHHHHHhCCcEe
Confidence 456677753 34456678888999998887652 356778889999999985433333
No 195
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.13 E-value=1.6e+02 Score=18.01 Aligned_cols=58 Identities=19% Similarity=0.128 Sum_probs=37.2
Q ss_pred CCCCCCCeeeccccCC---CC------chHHHHHHHHHhCCceEEecc-----CeeEEEecCHHHHHHHHHh
Q 039787 42 PGPTPYPVIGNLLELG---DK------PHKSLAKLAKIHGPIMTLKFG-----QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 42 pgp~~~p~~g~~~~~~---~~------~~~~~~~~~~~yG~i~~~~~~-----~~~~v~i~dp~~~~~i~~~ 99 (278)
|.|...-++.|+..-. .+ ..+.+.+...+||+|..+.+. |.-.|...+++.+...+..
T Consensus 12 ~~~s~~l~l~Nl~~~~~~~~~~~~~~~~e~~l~~~f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai~~ 83 (112)
T 2dit_A 12 MRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQT 83 (112)
T ss_dssp CCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHH
T ss_pred CCCceEEEEEcCCCHHHhccCHHHHHHHHHHHHHHHHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHHHH
Confidence 4454555666664321 01 124567778899998887653 4567777889888888754
No 196
>2ki2_A SS-DNA binding protein 12RNP2; HP0827, RRM, SS-DNA binding proteins, RNA binding protein/SS-DNA binding protein complex; NMR {Helicobacter pylori}
Probab=20.11 E-value=1.4e+02 Score=17.19 Aligned_cols=47 Identities=17% Similarity=0.274 Sum_probs=29.8
Q ss_pred eeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 50 IGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 50 ~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
+|++.. ......+.++..+||+|..+.+. |.-.|-..+++ +...+..
T Consensus 6 V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~-a~~a~~~ 61 (90)
T 2ki2_A 6 VGNLVY--SATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQEES-VSEAIAK 61 (90)
T ss_dssp EEEECT--TSSHHHHTTTHHHHTCCSEEEECCCSSSCCCCEEEEEEECTTH-HHHHHHT
T ss_pred ECCCCC--CCCHHHHHHHHHhcCCEEEEEEEEcCCCCCcceEEEEEECCHH-HHHHHHH
Confidence 455532 23345566777889998877653 23466777888 7777643
No 197
>1h2v_Z 20 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: d.58.7.1 PDB: 1h2u_X* 1h2t_Z 1n52_B* 1n54_B 3fex_B 3fey_B 1h6k_X
Probab=20.07 E-value=1.9e+02 Score=18.92 Aligned_cols=51 Identities=20% Similarity=0.160 Sum_probs=36.7
Q ss_pred CCeeeccccCCCCchHHHHHHHHHhCCceEEecc---------CeeEEEecCHHHHHHHHHh
Q 039787 47 YPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFG---------QVTTVVVSSASMAKAILQN 99 (278)
Q Consensus 47 ~p~~g~~~~~~~~~~~~~~~~~~~yG~i~~~~~~---------~~~~v~i~dp~~~~~i~~~ 99 (278)
.-+++++.. ......+.++..+||+|..+.+. +.-.|...+++.++.++..
T Consensus 41 ~l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 100 (156)
T 1h2v_Z 41 TLYVGNLSF--YTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 (156)
T ss_dssp EEEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 445677653 34456688889999999888762 2346778899999999864
No 198
>3ezq_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS, membrane,receptor, transmembrane; 2.73A {Homo sapiens} SCOP: a.77.1.2 PDB: 1ddf_A
Probab=20.02 E-value=1.8e+02 Score=18.49 Aligned_cols=38 Identities=11% Similarity=0.111 Sum_probs=24.1
Q ss_pred HHHHHhhhhhhccCcchhhhhHH----HHHHHHHHHHHHHHH
Q 039787 132 WKNLRKICNLHIFSSHKLDANQD----IRRKKIKHLLAYVEE 169 (278)
Q Consensus 132 w~~~R~~~~~~~f~~~~l~~~~~----~~~~~~~~l~~~~~~ 169 (278)
|+..+++..+-.++...+..... -..+.+.+++..|.+
T Consensus 20 ~~~wK~laR~LGlse~~Id~I~~d~~~d~~Eq~~qlLr~W~~ 61 (115)
T 3ezq_A 20 LSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQ 61 (115)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHhhHHHHHHcCCCChHHHHHHHHHHHHH
Confidence 44444444434577777775442 255888999999964
Done!