BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039790
(1395 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LTT8|VCS_ARATH Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana GN=VCS
PE=1 SV=1
Length = 1344
Score = 1369 bits (3544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 734/1307 (56%), Positives = 926/1307 (70%), Gaps = 61/1307 (4%)
Query: 107 LYPQQ---IPQPP----SPSHNPNPNSTSSSSSGNNLLMAFFANQHQHQPPSPTLPPPSD 159
L+PQ+ P PP SP N NP + + N A ANQ PS LP +
Sbjct: 81 LHPQRTLSYPTPPLNLQSPRSNHNPGTHILALLNNTNNGAPVANQE----PSHQLPVVNH 136
Query: 160 STVV--IPSAP-PVRLRSSKVPKGRHLIGNHSVYDIDVRLDGEVQPQLEVTPITKYISDP 216
+ + P P+R+ S K+PKGR LIG H+VYD+DVRL GE+QPQLEVTPITKY SDP
Sbjct: 137 NEIARSFPGGSGPIRVPSCKLPKGRRLIGEHAVYDVDVRLQGEIQPQLEVTPITKYGSDP 196
Query: 217 GLVLGRQIAVNRNYICYGLKLGNIRILNIITALRSLLRGHTQRVTDMAFFAEDVHLLASA 276
LV+GRQIAVN+ YICYGLK GNIR+LNI TALRSL RGH+QRVTDMAFFAEDV +LAS
Sbjct: 197 QLVVGRQIAVNKVYICYGLKGGNIRVLNINTALRSLFRGHSQRVTDMAFFAEDVDMLASV 256
Query: 277 SVDGRFFIWNITEGPDEEDKPQILGKIVVAIQILADGDSVHPRVCWHPHKQEILMLAIGN 336
S+DG+ F+W I+EG + ED+PQI GKIV+A+QIL + D+ HPRVCWH HKQEIL+++IG
Sbjct: 257 SLDGKVFVWKISEGSEGEDQPQITGKIVLALQILGEEDTKHPRVCWHCHKQEILVVSIGK 316
Query: 337 RILKIDSNRVGKGERFSAEEPLKCPVDELINGVQLVGKHDGEITELSMCQWLTTRLASAS 396
+L+ID+ +VG+GE FSAE PL+CP+D+LI+GVQ+VGKHDGE+T+LSMCQW+TTRL S+S
Sbjct: 317 HVLRIDTTKVGRGEVFSAEAPLQCPLDKLIDGVQIVGKHDGEVTDLSMCQWMTTRLVSSS 376
Query: 397 LDGTVKIWDDRKSTPLAVLRPYDGHPVNCVTFLIGP-HPQHIVLITGGPLNRELKIWASA 455
+DGT+KIW DRK+ PL VLRP+DGHPV+ TF+ P P HI+LITGGPLNRE+KIW SA
Sbjct: 377 VDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMKIWVSA 436
Query: 456 EEEGWLLPSDIESWKCTQTLELKSSAELRLEDAFFNQVVALNRAGLFLLANAKKNAIYAI 515
EEGWLLP+D ESW+CTQTL+LKSS E R E+AFFNQV+AL+ AGL LLANAK+NA+YA+
Sbjct: 437 GEEGWLLPADAESWRCTQTLDLKSSTEPRAEEAFFNQVIALSEAGLLLLANAKRNALYAV 496
Query: 516 HMDYGPNPASTRMDYIAEFTVTMPILSLTGTTTDASPDGEHIVQIYCVQTQAIQQYALDL 575
H+DYG +P TRMDY++EFTVTMPILS GT P E IV++YCVQT AIQQY LDL
Sbjct: 497 HLDYGSSPVGTRMDYLSEFTVTMPILSFIGTN---DPPEEPIVKVYCVQTLAIQQYTLDL 553
Query: 576 SQCLPPPLENAELEKTDSNATRAFDVANPDGSASLESSHGTKSADVGTTSLVPP--ILSS 633
CLPPP+EN LEK+DS+ +R ++ + G K D+ + VP I+ +
Sbjct: 554 CLCLPPPIENMGLEKSDSSVSREANLVE-----GMSEPSGLKPTDLPSVDSVPKPSIIVN 608
Query: 634 STESVPIASRPEGLPSSEVSSLSENASGAETKPSALPS--GNAENIHSASPPLPLSPRLS 691
+ES S PS+E +S + E K S LPS A + ++ P LPLSPRLS
Sbjct: 609 RSESANKLS----FPSAEATSQAIVPPNGEPKTSGLPSQTSGAGSAYATLPQLPLSPRLS 664
Query: 692 RKSSGYRSPSNGFEPSAQPNEHGSEQAVTDYSVDRRTNTSKEKMADVPSSGDNLWKGDRN 751
K SGY +P EP +E G + DYSVDR+ + E+ DV S + D N
Sbjct: 665 SKLSGYHTPVEAIEPVIPHHELGGKTPSADYSVDRQMDAVGERNLDVSSVEEISRSKDSN 724
Query: 752 -SAQNDISMVPDPPVVFKHPTHLVTPSEILSTAASSSENSQFSQRMNVGEAKVQDAVVNN 810
+ +D+S + P FKHPTHLVTPSEIL SS+E S ++ +A +QD VNN
Sbjct: 725 VTPDDDVSGMRSPSAFFKHPTHLVTPSEIL-MGVSSAEASITTEDRRDRDANIQD--VNN 781
Query: 811 DAEGVEVEVKVVGETGGLKN-EFNSR-ESHATVTEKKEKSFYSQASDLGIQMARDCCMGT 868
D EVEVK + E +N E N E+ +E +EK F SQ S+L +MARDC T
Sbjct: 782 DPRDTEVEVKEISEARSTQNGEINDHDETENCTSENREKVFCSQVSNLSTEMARDCYPST 841
Query: 869 YNVDGIRQASDVEAQDRPSNNGEVEEQDMSKDTPAKVGASEASMVILQSPSPAAKGRKQK 928
+G + +A +P G+ D S+ PAK+ KG+KQK
Sbjct: 842 ---EGTFIPGESKAYGQPIKAGDESGVD-SRGGPAKL----------------LKGKKQK 881
Query: 929 GKNSQISGTSSPSPSPYNSADSSNEPACISGAPSTDATMSQLLAMQDMLNQMMSTQKEIQ 988
KNSQ G SS S + N ADS NE + P TD + QLLAMQ+ +NQ+M++QKE+Q
Sbjct: 882 AKNSQGPGLSSTSSNVANLADSFNEQSQSLSHPMTD-LLPQLLAMQETMNQVMASQKEMQ 940
Query: 989 KQMNSVVSAPVNKEGKRLEASLGRSIEKVVKANSDALWARFQEENAKHEKLERDRMQQIT 1048
+Q+++ + P+ KE KRLE +LGR IEK K+N+DALWAR QEE K+EK RD QQI
Sbjct: 941 RQLSNAATGPIGKESKRLEVALGRMIEKSSKSNADALWARIQEETVKNEKALRDHAQQIV 1000
Query: 1049 NLITNTINKDLPAILEKTLKKEIAAVGPAVARAISPTLEKSISSAIMESFQKGVGEKAVS 1108
N TN ++K+L A+ EKT+KKE+AA+GPA+AR++ P +EK++SSAI ESFQ+G+G+KAV+
Sbjct: 1001 NATTNFMSKELNAMFEKTIKKELAAIGPALARSVVPVIEKTVSSAITESFQRGIGDKAVN 1060
Query: 1109 QLEKSVSSKLETTVARQIQAQFQTSGKQALQDALRSNLETSIIPAFEMSCKAMFEQIDST 1168
QL+KSV+ KLE TVARQIQAQFQTSGKQALQ+ LRS++E+S+IP+FE +CKAMF+QIDS
Sbjct: 1061 QLDKSVNIKLEATVARQIQAQFQTSGKQALQEGLRSSVESSVIPSFEKACKAMFDQIDSA 1120
Query: 1169 FQKGLIKHTTAIQQQFETAHSPMAIALRDAINSATSITQTLSGELADGQRKLLAMAAAGA 1228
FQKG+ +HT A QQ+F++ HS +A L+++I SA+S+ Q LS ELA+ QR LLA+AAAGA
Sbjct: 1121 FQKGIAEHTNAAQQRFDSGHSQLAHTLKESITSASSVAQALSRELAETQRNLLALAAAGA 1180
Query: 1229 NTKTGTSLVTQSSNGPLAGLHEMVEAPLDPTKELSRLIAERKYEEAFTGALHRSDVSIVS 1288
N+ SLVTQ S GPL L E VEAP+DPT ELSRLI+ERKYEE+FT AL RSDVSIVS
Sbjct: 1181 NSGGSNSLVTQLSGGPLGALLEKVEAPMDPTTELSRLISERKYEESFTSALQRSDVSIVS 1240
Query: 1289 WLCSQVDLPGILSTVPLPLSQGVLLALLQQLACDISKETPRKLAWMTDVAVAINPADPMI 1348
WLCSQVDL G+L+ PLPLSQGVLL+LLQQLACDISK+T RKLAWMTDV AINP+D MI
Sbjct: 1241 WLCSQVDLRGLLAMNPLPLSQGVLLSLLQQLACDISKDTSRKLAWMTDVVAAINPSDQMI 1300
Query: 1349 SMHVRPIFEQVYQILGHQRNLPSTSASEANSIRLLMHVINSVLMSCK 1395
++H RPIFEQVYQIL H RN P S+ ++IRL+MHVINS+LM CK
Sbjct: 1301 AVHARPIFEQVYQILHHHRNAP---GSDVSAIRLIMHVINSMLMGCK 1344
>sp|Q9LTT9|VCR_ARATH Varicose-related protein OS=Arabidopsis thaliana GN=VCR PE=2 SV=1
Length = 1340
Score = 1351 bits (3497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 737/1402 (52%), Positives = 950/1402 (67%), Gaps = 105/1402 (7%)
Query: 22 FDMNKLLKPSSNPMNMIPNSTNLTTSPSFPSPSSVSSPSPYLTPSSSYPPPTGPYPPYHY 81
FD+ + KPSSNP YPPPTGP+ Y
Sbjct: 16 FDLGTIFKPSSNP----------------------------------YPPPTGPFLNNQY 41
Query: 82 ----YPSP-----PPPQHQLFQQQQQQQQNRPQILYPQQI---------PQPPSPSHNPN 123
Y P P P +Q QQ + L PQ+ PQ P +HNP
Sbjct: 42 NQQLYAPPGIAAQPSPVNQ--TQQDVSSSSSATNLQPQRTLSYPTPPLNPQSPRVNHNPG 99
Query: 124 PNSTSSSSSGNNLLMAFFANQH--QHQPPSPTLPPPSDSTVVIPSAPPVRLRSSKVPKGR 181
+ + ++G + ANQ H + P S P+ + S K+PKGR
Sbjct: 100 THILALLNNGGAV-----ANQEPSHHNEIARAFPGGSG---------PIHVPSGKMPKGR 145
Query: 182 HLIGNHSVYDIDVRLDGEVQPQLEVTPITKYISDPGLVLGRQIAVNRNYICYGLKLGNIR 241
L+G H+VYD+DVRL GE+QPQLEVTPITKY SDP LVLGRQIAVN+ YICYGLK G+IR
Sbjct: 146 RLVGEHAVYDVDVRLQGEIQPQLEVTPITKYGSDPQLVLGRQIAVNKVYICYGLKGGSIR 205
Query: 242 ILNIITALRSLLRGHTQRVTDMAFFAEDVHLLASASVDGRFFIWNITEGPDEEDKPQILG 301
+LNI TALRSL RGH+QRVTDMAFFAEDVHLLAS S+DG+ F+W I+EG + +++ QI G
Sbjct: 206 VLNINTALRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKISEGSEGDEQSQITG 265
Query: 302 KIVVAIQILADGDSVHPRVCWHPHKQEILMLAIGNRILKIDSNRVGKGERFSAEEPLKCP 361
KIVVA+QIL + D+ HPRVCWH HKQEIL+++IG +L+ID+ +VG+GE FSAE PL+C
Sbjct: 266 KIVVALQILGEEDTKHPRVCWHCHKQEILVVSIGKHVLRIDTTKVGRGEVFSAEAPLQCH 325
Query: 362 VDELINGVQLVGKHDGEITELSMCQWLTTRLASASLDGTVKIWDDRKSTPLAVLRPYDGH 421
+D+LI+GVQ+VGKHDGE+T+LSMCQW+TTRL S+S+DGTVKIW DRK+ PL VLRP+DG
Sbjct: 326 LDKLIDGVQIVGKHDGEVTDLSMCQWMTTRLVSSSVDGTVKIWQDRKTQPLVVLRPHDGL 385
Query: 422 PVNCVTFLIGP-HPQHIVLITGGPLNRELKIWASAEEEGWLLPSDIESWKCTQTLELKSS 480
PVN F+ P P HI+LITGGPLNRE+KIW SA EEGWLLP+D ESW+CTQTL+LKSS
Sbjct: 386 PVNSAIFVTSPERPDHIILITGGPLNREIKIWVSAGEEGWLLPADTESWRCTQTLDLKSS 445
Query: 481 AELRLEDAFFNQVVALNRAGLFLLANAKKNAIYAIHMDYGPNPASTRMDYIAEFTVTMPI 540
E + E AFFNQV+AL+ AGL LLANA++NAIY++H+DYG +P T MDY++EFTVTMPI
Sbjct: 446 TEPQAEKAFFNQVIALSEAGLLLLANARRNAIYSVHLDYGSSPVETLMDYLSEFTVTMPI 505
Query: 541 LSLTGTTTDASPDGEHIVQIYCVQTQAIQQYALDLSQCLPPPLENAELEKTDSNATRAFD 600
LS G T+ P+ E V++YCVQT AIQQY LDL C+PPP EN EK+DS +R +
Sbjct: 506 LSFIG--TNDHPE-EPFVKVYCVQTLAIQQYTLDLFLCMPPPRENVGFEKSDSTVSREAN 562
Query: 601 VANPDGSASLESSHGTKSADVGTTSLVPP--ILSSSTESVPIASRPEGLPSSEVSSLSEN 658
+ ++LE+S G K ++ + VP IL + +E+ + S P G S+ ++ +
Sbjct: 563 LVE----STLETS-GMKPTELPSVGSVPKPSILVNRSENANMLSFPAGPASAGITPPAIV 617
Query: 659 ASGAETKPSALPS--GNAENIHSASPPLPLSPRLSRKSSGYRSPSNGFEPSAQPNEHGSE 716
E K S +PS + ++ ++ SP LPLSPRLS K SGY +P FE ++ G +
Sbjct: 618 PPNGEPKTSGMPSETSDVDSAYAPSPQLPLSPRLSSKLSGYHTPVEAFEQVLPHHKLGGK 677
Query: 717 QAVTDYSVDRRTNTSKEKMADVPSSGDNLWKGDRN-SAQNDISMVPDPPVVFKHPTHLVT 775
+ DY R+T+ + DV S +N D N + +D+S + P FK PTHLVT
Sbjct: 678 TSSADYFYVRQTDDVGGRNLDVSSVEENCRSKDTNVTPDDDVSGIRSPSAFFKQPTHLVT 737
Query: 776 PSEILSTAASSSENSQFSQRMNVGEAKVQDAVVNNDAEGVEVEVKVVGETGGLKN-EFNS 834
PSEIL SS+E S ++ +A +++ VNNDA G+EVE+K VGE +N E N
Sbjct: 738 PSEIL-MGVSSTEASITTEDKRDRDANIEE--VNNDARGLEVELKEVGEAQTSQNGEINY 794
Query: 835 RESHATVT-EKKEKSFYSQASDLGIQMARDCCMGTYNVDGIRQASDVEAQDRPSNNGEVE 893
E+ T E +E F SQAS+L +MARD T +G D A +P G+
Sbjct: 795 HETTENHTSESRENIFCSQASNLSTEMARDRHPIT---EGSAIPGDSMAYGQPLQAGDER 851
Query: 894 EQDMSKDTPAKVGASEASMVILQSPSPAAKGRKQKGKNSQISGTSSPSPSPYNSADSSNE 953
D S+D AK+ S +S ++ + S KG+KQK KNSQ G SS S + N ADS NE
Sbjct: 852 GLD-SRDVSAKLPESGSSSGLVATNS---KGKKQKAKNSQGPGLSSTSSNVANLADSFNE 907
Query: 954 PACISGAPSTDATMSQLLAMQDMLNQMMSTQKEIQKQMNSVVSAPVNKEGKRLEASLGRS 1013
+ P D + QLLA+Q+ + Q+M++QKE+Q+Q+++ V+ P+ KEGK+LE +LGR
Sbjct: 908 QSQSLNHPMAD-LLPQLLALQETMTQVMASQKEMQRQLSNAVTGPIVKEGKKLEVALGRM 966
Query: 1014 IEKVVKANSDALWARFQEENAKHEKLERDRMQQITNLITNTINKDLPAILEKTLKKEIAA 1073
IEK K+N+DALWA FQEE K+EK RD QQI N TN +K+L A+ EKT+KKE A+
Sbjct: 967 IEKSSKSNADALWAHFQEEAVKNEKALRDHGQQIMNETTNFTSKELNAMFEKTMKKEFAS 1026
Query: 1074 VGPAVARAISPTLEKSISSAIMESFQKGVGEKAVSQLEKSVSSKLETTVARQIQAQFQTS 1133
VGP +AR ++P +EK++SSAI ESFQ+G+G+KAV+QLEKSV+SKLETTVARQIQAQFQTS
Sbjct: 1027 VGPTLARVVTPVIEKTVSSAITESFQRGIGDKAVNQLEKSVNSKLETTVARQIQAQFQTS 1086
Query: 1134 GKQALQDALRSNLETSIIPAFEMSCKAMFEQIDSTFQKGLIKHTTAIQQQFETAHSPMAI 1193
G+Q LQ+ LRS++E+S+IP+FE SCK MFEQ+DST QKG+ KHT+A QQ+ ++ S +A
Sbjct: 1087 GRQVLQEGLRSSMESSVIPSFERSCKTMFEQVDSTLQKGIGKHTSATQQRIDSGQSQLAH 1146
Query: 1194 ALRDAINSATSITQTLSGELADGQRKLLAMAAAGANTKTGTSLVTQSSNGPLAGLHEMVE 1253
LR+ I+SA+S+TQ L+ ELA+ QR LA+ AAG+N LVTQ SNGPL L E VE
Sbjct: 1147 TLRETISSASSVTQALNRELAESQRNRLALTAAGSN-----PLVTQLSNGPLGALLEKVE 1201
Query: 1254 APLDPTKELSRLIAERKYEEAFTGALHRSDVSIVSWLCSQVDLPGILSTVPLPLSQGVLL 1313
AP+DPT ELSRLI+ERKYEE+FT AL RSDVSIVSWLCSQVDL G+L+ PLPLSQGVLL
Sbjct: 1202 APMDPTTELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVLL 1261
Query: 1314 ALLQQLACDISKETPRKLAWMTDVAVAINPADPMISMHVRPIFEQVYQILGHQRNLPSTS 1373
+LLQQLACDIS +T RKL WMTDV AINP+D MI++H RPIFEQVYQIL H RN P
Sbjct: 1262 SLLQQLACDISTDTSRKLGWMTDVVTAINPSDQMIAVHARPIFEQVYQILHHHRNAP--- 1318
Query: 1374 ASEANSIRLLMHVINSVLMSCK 1395
S+ +++RL+MHVINS+LMSCK
Sbjct: 1319 GSDVSAVRLIMHVINSLLMSCK 1340
>sp|Q7ZXT3|EDC4_XENLA Enhancer of mRNA-decapping protein 4 OS=Xenopus laevis GN=edc4 PE=2
SV=1
Length = 1391
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 167/377 (44%), Gaps = 68/377 (18%)
Query: 203 QLEVTPITKYISDPGLVLGRQIAVNRNYICYGLKLGN----IRILNIITALRSLLRGHTQ 258
++++ P+ KY + G IAV+ +YI Y + N +R+L++ TA R LL+G T
Sbjct: 114 KVKIQPVAKYDWEQKYYCGNLIAVSNDYIAYATRGANGSAMVRVLSLTTAERILLKGITG 173
Query: 259 RVTDMAFFAEDVHLLASASVDGRFFIWNI--TEGPDEEDKPQILGKIVVAIQ-----ILA 311
VTD+AF + LA G F+W + T G ++D IVV I+ +L
Sbjct: 174 SVTDLAFAHLKSNHLACLDEAGSLFVWQLTMTNGKIQDD-------IVVHIRRPENTVL- 225
Query: 312 DGDSVHPRVCWHPH----KQEILMLAIGNRI--LKIDSNRVGKGERFSAEEPLKCPVD-- 363
S+ R+ W P+ +E ++ I L D V E PVD
Sbjct: 226 ---SIFRRIIWCPYIPEENEENVVDDTSQTIALLHEDKAEVWDLEIIQTNHN-TWPVDVS 281
Query: 364 ELINGVQLVGKHDGEITELSMCQWLTTRLASASLDGTVKIWD---DRKSTP--LAVLRPY 418
E+ G +V H G ++E ++ T LA+AS DG VK W + + P L +P+
Sbjct: 282 EIKEGFIIVKGHSGRLSEGALSP-DGTVLATASHDGYVKFWQIYIEGQDQPRCLHEWKPH 340
Query: 419 DGHPVNCVTFLIGPHPQH------IVLITGGPLNRELKIWASAEEEGWLLPSDIESWKCT 472
+G P++C+ F Q LITG NRELK+W + SW
Sbjct: 341 NGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKVWCTV------------SWTSL 388
Query: 473 QTLELKSSAELRLEDAFFNQVV-----ALNRAGLFL-LANAKKNAIYAIHMDYGPNPAST 526
QT++ D F + V+ +L+ + FL L + ++ +Y + ++ +
Sbjct: 389 QTIQFSP-------DPFSSGVLPGLKASLDLSAEFLILTDVQRKVLYVMELNQNQDEGKA 441
Query: 527 RMDYIAEFTVTMPILSL 543
I+EF +T P+LS
Sbjct: 442 TFTSISEFLLTHPVLSF 458
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/537 (20%), Positives = 229/537 (42%), Gaps = 56/537 (10%)
Query: 871 VDGIRQASDVEAQDRPSNNGEVEEQDMSKDTPAKVGASEASMVILQSPSPAAKGRKQKGK 930
VD R D +N + +Q S+D A+ + + L S S + G+ Q
Sbjct: 835 VDSSRNGQDRGDSSFHRHNYHLLQQHDSQDASAEQSDHDDEVASLASISGSFGGKGQHLL 894
Query: 931 NSQISGTSSPSPSPYNSADSSNEPACISGAPSTDATMSQLLAMQDMLNQMMSTQKEIQ-- 988
SP SP S + ++ +P + L +++L + S QKE+
Sbjct: 895 IKDWKSKLSPRSSPKLRRKSKKDEMELAKSPRVSDHLVNLELQEELLCMLRSQQKELSDL 954
Query: 989 KQMNSVVSAPVNKEGKRLEASLGRSIEKVVKANSDALWARFQ-------EENAK-HEKLE 1040
+Q + + +++S+ +E+V+ + R + E N + E L
Sbjct: 955 RQNQLELMKKLTDHMDAVQSSIMGHVERVIDTQQEQEQRRVERILSDGHERNGQLQEYLS 1014
Query: 1041 RDRMQQITNLITNTINKDLPAILEKTLKKEIAAVGPAVARAISPTLEKSISSAIMESFQK 1100
+ ++ ++N ++K + ++KT+ + I+ VA ++ ++ +++ +
Sbjct: 1015 QQLSHSLSGSLSNRVDKIIREEMKKTVSQCISKTLDPVAAQLTSSVAAKVTAV------E 1068
Query: 1101 GVGEKAVSQLEKSVSSKLETTVARQIQAQFQTSGKQALQDALRSNLETSIIPAFEMSCKA 1160
GV ++ V+++ KS + + R QT + A R ++ ++PAFE SC++
Sbjct: 1069 GVLKENVTKMVKS--KNVTDAIGRVAADSLQT----VIHSAYREAFQSIVLPAFERSCQS 1122
Query: 1161 MFEQIDSTFQKG-------LIKHTTAIQQQFETAHSPMAIALRDAINSATSITQTLSGEL 1213
MF+Q++++F++G L H +I+ + P+ L+ ++S ++T L+ +
Sbjct: 1123 MFQQVNNSFKQGTQDYMQQLEAHLRSIKMNEQETRDPVVTQLQQMVDSLQTVTDQLASNI 1182
Query: 1214 ADGQRK----------------LLAMAAAGANTKTGTSLVTQSSNGPLAGLHEMVEAPLD 1257
R +L+ + ++ Q + + + M A
Sbjct: 1183 TSNVRSEVQHQLHIAVGNMQDSILSQVQRIIKEEVSHAMKEQQAAVTSSIMQAMRSAAGT 1242
Query: 1258 PT-----------KELSRLIAERKYEEAFTGALHRSDVSIVSWLCSQVDLPGILSTVPLP 1306
P + +L+ + + +AF AL SD++++ ++C VD + P P
Sbjct: 1243 PIPSSHMDFHSQQTHILQLMQQGQINQAFQQALTASDLNLILYVCETVDPQQVFGQHPCP 1302
Query: 1307 LSQGVLLALLQQLACDISKETPRKLAWMTDVAVAINPADPMISMHVRPIFEQVYQIL 1363
L+Q VLL+L+QQL+ D T KL ++ + + ++ +DP+ H+ + QV Q L
Sbjct: 1303 LTQPVLLSLIQQLSFDFGSRTEIKLNYLEEAVMNLDHSDPVTRDHMGTVLNQVRQKL 1359
>sp|Q1LUT1|EDC4_DANRE Enhancer of mRNA-decapping protein 4 OS=Danio rerio GN=edc4 PE=2
SV=1
Length = 1384
Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 199/494 (40%), Gaps = 102/494 (20%)
Query: 203 QLEVTPITKYISDPGLVLGRQIAVNRNYICYGLKLGN----IRILNIITALRSLLRGHTQ 258
++++ P+ KY + G IAV+ Y+ Y ++ N IR+L++ + RSLL+G T
Sbjct: 115 KVKIQPVAKYDWEHKYYYGNLIAVSNTYLAYAIRGANNHSMIRVLHLSSTERSLLKGFTG 174
Query: 259 RVTDMAFFAEDVHLLASASVDGRFFIWNITEGPDEEDKPQILGKIVVAIQILADGD-SVH 317
VTD+AF D LL G FIW +T +I +++V I+ D + +
Sbjct: 175 AVTDLAFAHLDSTLLGCVDEAGNMFIWQLTS-----HSSKIQDEVIVHIRRPEDTPLNSN 229
Query: 318 PRVCWHPHKQE-----------ILMLAIGNR--ILKIDSNRVGKGERFSAEEPLKCPVD- 363
R+ W P E L L +R + +D R PVD
Sbjct: 230 RRLIWCPFIPEDNDESPEDACQTLALLHEDRAEVWDLDILRSNNS---------SWPVDA 280
Query: 364 -ELINGVQLVGKHDGEITELSMCQWLTTRLASASLDGTVKIWD---DRKSTP--LAVLRP 417
EL G + H I+E ++ T LA+AS DG VK W + + P L +P
Sbjct: 281 TELKEGFITIRGHAARISEGALSPDGTV-LATASHDGYVKFWQIYIEGQDQPRCLHEWQP 339
Query: 418 YDGHPVNCVTFLIGPHPQH------IVLITGGPLNRELKIWASAEEEGWLLPSDIESWKC 471
++G P++C+ F Q LITG N+ELK+W + SW C
Sbjct: 340 HNGQPLSCLLFCDNHKKQDPDVPFWRFLITGADQNQELKMWCTV------------SWTC 387
Query: 472 TQTLELKSSAELRLEDAFFNQVVALNRAGL------FLLANAKKNAIYAIHMDYGPNPAS 525
QT+ D F V+ +A L +L++ ++ +Y + +
Sbjct: 388 LQTIRFSP-------DPFNCGVLPSLKASLDLSAEFLILSDVQRKVLYVMELLQDQEKGR 440
Query: 526 TRMDYIAEFTVTMPIL-------------------------SLTGTTTDASPDGEHIVQI 560
++EF +T P+L S+T + + +QI
Sbjct: 441 ASFTAVSEFLLTHPVLSFGVQDVSRARLRHTEVLPPEEESESMTAEGNQGTSESRSGIQI 500
Query: 561 --YCVQTQAIQQYALDLSQCLPPPLENAELEKTDSNATRAFDVANPDGSASLES-SHGTK 617
YCV T+++Q + P +++ L S + F ++P ++E+ S +
Sbjct: 501 KLYCVHTKSLQDVQIWFQ---PNQGDSSSLFMPQSGSQDGFSFSDPLADLNVEAMSSDKE 557
Query: 618 SADVGTTSLVPPIL 631
S D G+ + + IL
Sbjct: 558 SGDSGSQNDLSKIL 571
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 211/475 (44%), Gaps = 67/475 (14%)
Query: 938 SSPSPSPYNSADSSNEPACISGAPSTDATMSQLLAMQDMLNQMM-STQKEI----QKQMN 992
+SP SP S + S + ++ MS +QD L QM+ S Q+EI Q Q++
Sbjct: 899 TSPRSSPKLKRKSKKDEGESSQSRQIESQMS--TEVQDELLQMLRSQQREIAELRQNQLD 956
Query: 993 SVVSAPVNKEGKRLEASLGRSIEKVVKANSDALWARFQEENAKHEKLERDRMQQITNLIT 1052
+ V +++S+ IE + A + R + + + + Q+ +
Sbjct: 957 LL--QRVTSHMDAVQSSMMAHIEHAMLAQQEQEQRRMERILVEGQSRNQQLQDQLVQQLV 1014
Query: 1053 NTINKDLPAILEKTLKKEIAAVGPAVARAISPTLE------KSISSAIMESFQKGVGEKA 1106
T+N L LEK L++E+ P + IS +LE S +A + + + + E
Sbjct: 1015 QTLNNSLCNRLEKVLREEMKKTVP---QTISKSLEPVTGQMNSTIAAKLTAVEGALKENV 1071
Query: 1107 VSQLE-KSVSSKLETTVARQIQAQFQTSGKQALQDALRSNLETSIIPAFEMSCKAMFEQI 1165
++ K+ + + A +Q Q + K+ Q + ++P FE C++MF+QI
Sbjct: 1072 TKVVKSKNTTDAIGRAAAEAMQGPIQAAYKETFQ--------SIVLPVFERGCQSMFQQI 1123
Query: 1166 DSTFQKG-------LIKHTTAIQQQFETAHSPMAIALRDAINS--------ATSITQTLS 1210
+ +F++G L H +Q+ + P+ L+ I+S A+++T ++S
Sbjct: 1124 NDSFKQGTNEYIQQLETHIKNRKQRDQDTRDPVIGQLQQMIDSLQSSQDQLASTVTASVS 1183
Query: 1211 -----------GELADG-----QRKL-----LAMAAAGANTKTGTSLVTQSSNG-PLAGL 1248
G L D QR + LAM A + +S+ G P+
Sbjct: 1184 SDVQHQLHMIVGNLQDSILTQVQRIVKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPVPSA 1243
Query: 1249 HEMVEAPLDPTKELSRLIAERKYEEAFTGALHRSDVSIVSWLCSQVDLPGILSTVPLPLS 1308
H +A + +L+ + + EAF AL +D+++V ++C +D + P PL
Sbjct: 1244 HLDYQAQ---QASILQLLQQGQLNEAFQQALSAADLNLVLYVCETIDSQQVFGQQPCPLH 1300
Query: 1309 QGVLLALLQQLACDISKETPRKLAWMTDVAVAINPADPMISMHVRPIFEQVYQIL 1363
Q VLL+L+QQL+ ++S T K++++ D + ++ DP+ H+ + QV Q L
Sbjct: 1301 QAVLLSLIQQLSTNLSTRTELKISYLEDAVMNLDHGDPVTRDHMSAVLTQVRQKL 1355
>sp|Q6P2E9|EDC4_HUMAN Enhancer of mRNA-decapping protein 4 OS=Homo sapiens GN=EDC4 PE=1
SV=1
Length = 1401
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 46/339 (13%)
Query: 1063 LEKTLKKEIA-AVGPAVARAISPT---LEKSISSAIMESFQKGVGEKAVSQLEKSVSSKL 1118
LE++++ EI V P V+R++ P L S+++ + + +G ++ +S+L KS L
Sbjct: 1039 LERSIRDEIKKTVPPCVSRSLEPMAGQLSNSVATKL--TAVEGSMKENISKLLKS--KNL 1094
Query: 1119 ETTVARQIQAQFQTSGKQALQDALRSNLETSIIPAFEMSCKAMFEQIDSTFQKG------ 1172
+AR Q +Q A R ++ ++PAFE SC+AMF+QI+ +F+ G
Sbjct: 1095 TDAIARAAADTLQG----PMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQEYLQ 1150
Query: 1173 -LIKHTTAIQQQFETAHSPMAIALRDAINSATSITQTLSGELADG--------------- 1216
L H + + + + A P+ LR +++ S T+ ++ +A
Sbjct: 1151 QLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVAGSVRAEVQHQLHVAVGS 1210
Query: 1217 -QRKLLAMAAAGANTKTGTSLVTQSSNGPLAGLHEMVEAPLDPT-----------KELSR 1264
Q +LA + +L Q + + + M A P + +
Sbjct: 1211 LQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLDCQAQQAHILQ 1270
Query: 1265 LIAERKYEEAFTGALHRSDVSIVSWLCSQVDLPGILSTVPLPLSQGVLLALLQQLACDIS 1324
L+ + +AF AL +D+++V ++C VD + P PLSQ VLL+L+QQLA D+
Sbjct: 1271 LLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLSLIQQLASDLG 1330
Query: 1325 KETPRKLAWMTDVAVAINPADPMISMHVRPIFEQVYQIL 1363
T KL+++ + + ++ +DP+ H+ + QV Q L
Sbjct: 1331 TRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKL 1369
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 142/589 (24%), Positives = 237/589 (40%), Gaps = 113/589 (19%)
Query: 203 QLEVTPITKYISDPGLVLGRQIAVNRNYICYGLKLGN-----IRILNIITALRSLLRGHT 257
++++ P+ KY + G IAV+ +++ Y ++ N +R++++ T+ R+LL+G T
Sbjct: 117 KVKIQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFT 176
Query: 258 QRVTDMAFFAEDVHLLASASVDGRFFIWNI--TEGPDEEDKPQILGKIVVAIQILADGDS 315
V D+AF + LA G F+W + G +E+ I+V I+
Sbjct: 177 GSVADLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEE-------ILVHIRQPEGTPL 229
Query: 316 VH-PRVCWHPHKQEILMLAIGNR-----ILKIDSNRVGKGERF-SAEEPLKCPVDELING 368
H R+ W P E +L D V + S+ V ++ G
Sbjct: 230 NHFRRIIWCPFIPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQG 289
Query: 369 VQLVGKHDGEITELSMCQWLTTRLASASLDGTVKIWD---DRKSTP--LAVLRPYDGHPV 423
+V H ++E ++ T LA+AS DG VK W + + P L +P+DG P+
Sbjct: 290 FIVVKGHSTCLSEGALSP-DGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPL 348
Query: 424 NCVTFLIGPHPQH------IVLITGGPLNRELKIWASAEEEGWLLPSDIESWKCTQTLEL 477
+C+ F Q LITG NRELK+W + SW C QT
Sbjct: 349 SCLLFCDNHKKQDPDVPFWRFLITGADQNRELKMWCTV------------SWTCLQT--- 393
Query: 478 KSSAELRLEDAFFNQV-------VALNRAGLFL-LANAKKNAIYAIHMDYGPNPASTRMD 529
+R F+ V V L+ + +L L++ ++ +Y + +
Sbjct: 394 -----IRFSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQEEGHACFS 448
Query: 530 YIAEFTVTMPILSLTGTT--------TDASP----------DGEH-----------IVQI 560
I+EF +T P+LS T+ P DG H ++++
Sbjct: 449 SISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEEENDSLGADGTHGAGAMESAAGVLIKL 508
Query: 561 YCVQTQAIQQYALDLSQCLPPPLENAELEKTDSNATRAFDVANPD-GSASLES-SHGTKS 618
+CV T+A+Q + L P + A L ++ F + P+ GS L S +HG++
Sbjct: 509 FCVHTKALQDVQIRFQPQLNPDV-VAPLPTHTAHEDFTFGESRPELGSEGLGSAAHGSQP 567
Query: 619 ADVGTTSLVPP--ILSSSTESVPIASRPEGL--PSSEVSSLSENASGAE----------- 663
L P LS S+E+ P P+ PS+ + ++ + S +
Sbjct: 568 DLRRIVELPAPADFLSLSSETKPKLMTPDAFMTPSASLQQITASPSSSSSGSSSSSSSSS 627
Query: 664 ---TKPSALPSGNAENIHSASPP--LPLSPRLSRKSSGYRSPSNGFEPS 707
T SA+ S +A + PP L LSP+L S S S + S
Sbjct: 628 SSLTAVSAMSSTSAVDPSLTRPPEELTLSPKLQLDGSLTMSSSGSLQAS 676
>sp|Q3UJB9|EDC4_MOUSE Enhancer of mRNA-decapping protein 4 OS=Mus musculus GN=Edc4 PE=1
SV=2
Length = 1406
Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 170/363 (46%), Gaps = 48/363 (13%)
Query: 1063 LEKTLKKEIA-AVGPAVARAISPT---LEKSISSAIMESFQKGVGEKAVSQLEKSVSSKL 1118
LE++++ EI V P V+R++ P L S+++ + + +G ++ +S+L KS L
Sbjct: 1044 LERSVRDEIKKTVPPCVSRSLEPVAGQLSNSVATKL--TAVEGSMKENISKLLKS--KNL 1099
Query: 1119 ETTVARQIQAQFQTSGKQALQDALRSNLETSIIPAFEMSCKAMFEQIDSTFQKG------ 1172
+AR Q +Q A R ++ ++PAFE SC+AMF+QI+ +F+ G
Sbjct: 1100 TDAIARAAADTLQG----PMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQEYLQ 1155
Query: 1173 -LIKHTTAIQQQFETAHSPMAIALRDAINSATSITQTLSGELADG--------------- 1216
L H + + + + A P+ LR +++ S T+ ++ ++
Sbjct: 1156 QLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVSSSVRAEVQHQLHVAVGS 1215
Query: 1217 -QRKLLAMAAAGANTKTGTSLVTQSSNGPLAGLHEMVEAPLDPT-----------KELSR 1264
Q +LA + +L Q + + + M A P + +
Sbjct: 1216 LQESILAQVQRIVKGEVSVALKEQQATVTSSIMQAMRSAAGTPVPSAHLDCQAQQAHILQ 1275
Query: 1265 LIAERKYEEAFTGALHRSDVSIVSWLCSQVDLPGILSTVPLPLSQGVLLALLQQLACDIS 1324
L+ + +AF AL +D+++V ++C VD + P PLSQ VLL+L+QQLA D+
Sbjct: 1276 LLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLSLIQQLASDLG 1335
Query: 1325 KETPRKLAWMTDVAVAINPADPMISMHVRPIFEQVYQILGH--QRNLPSTSASEANSIRL 1382
+ KL+++ + + ++ +DP+ H+ + QV Q L Q + ++ + A + L
Sbjct: 1336 TRSDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQADPHNSLSKAARRLSL 1395
Query: 1383 LMH 1385
++H
Sbjct: 1396 MLH 1398
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 210/510 (41%), Gaps = 93/510 (18%)
Query: 203 QLEVTPITKYISDPGLVLGRQIAVNRNYICYGLKLGN-----IRILNIITALRSLLRGHT 257
++++ P+ KY + G IAV+ +++ Y ++ N +R++++ T+ R+LL+G T
Sbjct: 117 KVKIQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFT 176
Query: 258 QRVTDMAFFAEDVHLLASASVDGRFFIWNITEGPDEEDKPQILGKIVVAIQILADGDSVH 317
V D+AF + LA G F+W + K +I +I+V I+ +G +++
Sbjct: 177 GSVADLAFAHLNSPQLACLDEAGNLFVWRLALV-----KGKIQEEILVHIR-QPEGTALN 230
Query: 318 --PRVCWHPHKQEILMLAIGNR-----ILKIDSNRVGKGERF-SAEEPLKCPVDELINGV 369
R+ W P E +L D V + S+ V ++ G
Sbjct: 231 HFRRIIWCPFIPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHNTWPVDVSQIKQGF 290
Query: 370 QLVGKHDGEITELSMCQWLTTRLASASLDGTVKIWD---DRKSTP--LAVLRPYDGHPVN 424
+V H ++E ++ T LA+AS DG VK W + + P L +P+DG P++
Sbjct: 291 IVVKGHSTCLSEGALSP-DGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLS 349
Query: 425 CVTFLIGPHPQH------IVLITGGPLNRELKIWASAEEEGWLLPSDIESWKCTQTLELK 478
C+ F Q LITG NRELK+W + SW C QT
Sbjct: 350 CLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTV------------SWTCLQT---- 393
Query: 479 SSAELRLEDAFFNQV-------VALNRAGLFL-LANAKKNAIYAIHMDYGPNPASTRMDY 530
+R F+ V V L+ + +L L++ ++ +Y + + +
Sbjct: 394 ----IRFSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQDEGRACFSS 449
Query: 531 IAEFTVTMPILSLTGTT--------TDASPDGEH---------------------IVQIY 561
I+EF +T P+LS T+ P E +++++
Sbjct: 450 ISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEEENDSLGTESSHGAGALESAAGVLIKLF 509
Query: 562 CVQTQAIQQYALDLSQCLPPPLENAELEKTDSNATRAFDVANPD-GSASLES-SHGTKSA 619
CV T+A+Q + L P + A L ++ F + P+ GS L S +HG++
Sbjct: 510 CVHTKALQDVQIRFQPQLNPDV-VAPLSTHTAHEDFTFGESRPELGSEGLASAAHGSQPD 568
Query: 620 DVGTTSLVPP--ILSSSTESVPIASRPEGL 647
L P LS S+E+ P P+
Sbjct: 569 LRRIVELPAPADFLSLSSETKPELMTPDAF 598
>sp|Q3ZAV8|EDC4_RAT Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus GN=Edc4
PE=2 SV=1
Length = 1407
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 169/363 (46%), Gaps = 48/363 (13%)
Query: 1063 LEKTLKKEIA-AVGPAVARAISPT---LEKSISSAIMESFQKGVGEKAVSQLEKSVSSKL 1118
LE++++ EI V P V+R++ P L S+++ + + +G ++ +S+L KS L
Sbjct: 1045 LERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKL--TAVEGSMKENISKLLKS--KNL 1100
Query: 1119 ETTVARQIQAQFQTSGKQALQDALRSNLETSIIPAFEMSCKAMFEQIDSTFQKG------ 1172
+AR Q +Q A R ++ ++PAFE SC+AMF+QI+ +F+ G
Sbjct: 1101 TDAIARAAADTLQG----PMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQEYLQ 1156
Query: 1173 -LIKHTTAIQQQFETAHSPMAIALRDAINSATSITQTLSGELADG--------------- 1216
L H + + + + A P+ LR +++ + T+ ++ ++
Sbjct: 1157 QLDSHMKSRKAREQEAREPVLAQLRGLVSTLQNATEQMAATVSSSVRAEVQHQLHVAVGS 1216
Query: 1217 -QRKLLAMAAAGANTKTGTSLVTQSSNGPLAGLHEMVEAPLDPT-----------KELSR 1264
Q +LA + +L Q + + + M A P + +
Sbjct: 1217 LQESILAQVQRIVKGEVSVALKEQQATVTSSIMQAMRSAAGTPVPSAHLDCQAQQAHILQ 1276
Query: 1265 LIAERKYEEAFTGALHRSDVSIVSWLCSQVDLPGILSTVPLPLSQGVLLALLQQLACDIS 1324
L+ + +AF AL +D+++V ++C VD + P PLSQ VLL+L+QQLA D+
Sbjct: 1277 LLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLSLIQQLASDLG 1336
Query: 1325 KETPRKLAWMTDVAVAINPADPMISMHVRPIFEQVYQILGH--QRNLPSTSASEANSIRL 1382
+ KL+++ + + ++ +DP+ H+ + QV Q L Q + ++ A + L
Sbjct: 1337 TRSDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQADPHNSLGKAARRLSL 1396
Query: 1383 LMH 1385
++H
Sbjct: 1397 MLH 1399
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 209/510 (40%), Gaps = 93/510 (18%)
Query: 203 QLEVTPITKYISDPGLVLGRQIAVNRNYICYGLKLGN-----IRILNIITALRSLLRGHT 257
++++ P+ KY + G IAV+ +++ Y ++ N +R++++ T+ R+LL+G T
Sbjct: 117 KVKIQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFT 176
Query: 258 QRVTDMAFFAEDVHLLASASVDGRFFIWNITEGPDEEDKPQILGKIVVAIQILADGDSVH 317
V D+AF + LA G F+W + K +I +I+V I+ +G ++
Sbjct: 177 GSVADLAFAHLNSPQLACLDEAGDLFVWRLALV-----KGKIQEEILVHIR-QPEGTPLN 230
Query: 318 --PRVCWHPHKQEILMLAIGNR-----ILKIDSNRVGKGERF-SAEEPLKCPVDELINGV 369
R+ W P E +L D V + S+ V ++ G
Sbjct: 231 HFRRIIWCPFIPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQGF 290
Query: 370 QLVGKHDGEITELSMCQWLTTRLASASLDGTVKIWD---DRKSTP--LAVLRPYDGHPVN 424
+V H ++E ++ T LA+AS DG VK W + + P L +P+DG P++
Sbjct: 291 IVVKGHSTCLSEGALSP-DGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLS 349
Query: 425 CVTFLIGPHPQH------IVLITGGPLNRELKIWASAEEEGWLLPSDIESWKCTQTLELK 478
C+ F Q LITG NRELK+W + SW C QT
Sbjct: 350 CLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTV------------SWTCLQT---- 393
Query: 479 SSAELRLEDAFFNQV-------VALNRAGLFL-LANAKKNAIYAIHMDYGPNPASTRMDY 530
+R F+ V V L+ + +L L++ ++ +Y + + +
Sbjct: 394 ----IRFSPDIFSSVSVPPSLKVCLDLSAEYLILSDVQRKVLYVMELLQNQDEGRACFSS 449
Query: 531 IAEFTVTMPILSLTGTT--------TDASPDGEH---------------------IVQIY 561
I+EF +T P+LS T+ P E +++++
Sbjct: 450 ISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEEESDSLGTESSHGAGTLESAAGVLIKLF 509
Query: 562 CVQTQAIQQYALDLSQCLPPPLENAELEKTDSNATRAFDVANPD-GSASLESS-HGTKSA 619
CV T+A+Q + L P + A L ++ F + P+ GS L S+ HG++
Sbjct: 510 CVHTKALQDVQIRFQPQLNPDV-VAPLSTHTAHEDFTFGESRPELGSEGLASAPHGSQPD 568
Query: 620 DVGTTSLVPP--ILSSSTESVPIASRPEGL 647
L P LS S+E+ P P+
Sbjct: 569 LRRIVELPAPADFLSLSSETKPKLMTPDAF 598
>sp|Q9VKK1|EDC4_DROME Enhancer of mRNA-decapping protein 4 homolog OS=Drosophila
melanogaster GN=Ge-1 PE=1 SV=2
Length = 1354
Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 191/471 (40%), Gaps = 48/471 (10%)
Query: 956 CI--SGAPSTDATMSQLL----AMQDMLNQMMSTQKEIQKQMNSVVSAPVNKE------- 1002
C+ SG +A M L+ A +N++ + ++QKQ + + ++
Sbjct: 885 CVDSSGTGELNAKMELLIDLVKAQSKQINKLENEVNKLQKQQEAAAALHSKQDTSLEPKN 944
Query: 1003 ----GKRLEASLGRSIEKVVKANSDALWARFQEENAKHEKLERDRMQQITNLITNTINKD 1058
++E L + +E+ +K + + E A E R+ + ++ +
Sbjct: 945 LSQLAYKIEMQLSKLMEQYLKRYENEHKKKLTEFLAARESQNRELRDSVLQVLNQYVMNH 1004
Query: 1059 LPAILEKTLKKEIAAVGPAVARAISPTLEKSISSAIMES---FQKGVGEKAVSQLEKSVS 1115
I+ L E+ A L+ + I++ F K V E ++Q+ KS
Sbjct: 1005 FTDIIGNVLNMELQRQLLPRVNANMDQLQAQMQVEIVQKLSVFDKTVKEN-IAQVCKS-- 1061
Query: 1116 SKLETTVARQIQAQFQTSGKQALQDALRSNLETSIIPAFEMSCKAMFEQIDSTFQKGLIK 1175
+ T + + QTS LQ A ++ +++IPA+E S + MF+Q+ F G+
Sbjct: 1062 KQFLDTFGKSVLIGVQTS----LQTAFIESMSSTLIPAYEKSSQNMFKQLHDAFSVGIKD 1117
Query: 1176 HTTAIQQQFETAHSPMAIALR-DAINSATSITQTLSGELADGQRKLL--AMAAAGANTKT 1232
+ P A + + IN+ S+ + L R L AM K+
Sbjct: 1118 FMVQFNTYLQHMPQPQAGSGNTEEINNKLSMLKQLVESSLHKHRTELTDAMLETQREVKS 1177
Query: 1233 GTSLVTQSSNGPL-AGLHEMVEA--------------PLDPTKELSRLIAERKYEEAFTG 1277
L+ + + A L + +EA P D + +L+ + +AF
Sbjct: 1178 LEILLARQVQETIRAELRKHMEAQNVAMRSQAATPAPPYDLRDSIKQLLMAGQINKAFHQ 1237
Query: 1278 ALHRSDVSIVSWLCSQVDLPGILSTVPLPLSQGVLLALLQQLACDISKETPRKLAWMTDV 1337
AL +D+ +V + D + L Q VLL+L+QQ++ D++ K ++ +
Sbjct: 1238 ALLANDLGLVEFTLRHTDSNQAFAPEGCRLEQKVLLSLIQQISADMTNHNELKQRYLNEA 1297
Query: 1338 AVAINPADPMISMHVRPIFEQVYQ-ILGHQRNLPSTSASEANSIRLLMHVI 1387
+AIN ADP+ H + ++Y+ +N P S+ +++RLLM I
Sbjct: 1298 LLAINMADPITREHAPKVLTELYRNCQQFIKNSPKN--SQFSNVRLLMKAI 1346
>sp|Q7PS24|CIAO1_ANOGA Probable cytosolic iron-sulfur protein assembly protein Ciao1
OS=Anopheles gambiae GN=Ciao1 PE=3 SV=3
Length = 341
Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 26/186 (13%)
Query: 253 LRGHTQRVTDMAFFAEDVHLLASASVDGRFFIWNITEGPDEEDKPQILGKIVVAIQILAD 312
L GH V + + + +LLA+ S D +IW I PD+ED+ + + +L
Sbjct: 100 LEGHDNEVKSVTW-SRSGNLLATCSRDKSVWIWEIHHAPDQEDEYE-------CVAVLNG 151
Query: 313 GDSVHPRVCWHPHKQEILMLAIGNRILKIDSNRVGKGERFSAEEPLKCPVDELINGVQLV 372
+VCWHP ++++L A + +++ + E + EPL+
Sbjct: 152 HTQDVKKVCWHP-QEDLLASASYDNTIRMYRQDLADSE-WEMLEPLE------------- 196
Query: 373 GKHDGEITELSMCQWLTTRLASASLDGTVKIWDDR-KSTPLAVLRPYDGHPVNCVTFLIG 431
H + +S RLAS S D TVK+W L + P G CV L G
Sbjct: 197 -SHSSTVWSISF-DATGQRLASCSEDTTVKVWQQYGPDNALGIPCPDRGTIWKCVCTLSG 254
Query: 432 PHPQHI 437
H + +
Sbjct: 255 YHSRSV 260
>sp|Q3SWX8|RBBP7_BOVIN Histone-binding protein RBBP7 OS=Bos taurus GN=RBBP7 PE=2 SV=1
Length = 425
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 76/200 (38%), Gaps = 27/200 (13%)
Query: 253 LRGHTQRVTDMAFFAEDVHLLASASVDGRFFIWNITEGPDEEDKPQILGKIVVAIQILAD 312
LRGH + +++ + L SAS D +W+I GP E GKIV A I
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE-------GKIVDAKAIFTG 224
Query: 313 GDSVHPRVCWHPHKQEILMLAIGNRILKIDSNRVGKGERFSAEEPLKCPVDELINGVQLV 372
+V V WH + + ++ L I R + S LV
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS----------------HLV 268
Query: 373 GKHDGEITELSMCQWLTTRLASASLDGTVKIWDDRKSTPLAVLRPYDGHPVNCVTFLIGP 432
H E+ LS + LA+ S D TV +WD R L ++ H P
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSP 326
Query: 433 HPQHIVLITGGPLNRELKIW 452
H + I+ +G +R L +W
Sbjct: 327 HNETILASSG--TDRRLNVW 344
>sp|Q71UF4|RBBP7_RAT Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2
SV=1
Length = 425
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 76/200 (38%), Gaps = 27/200 (13%)
Query: 253 LRGHTQRVTDMAFFAEDVHLLASASVDGRFFIWNITEGPDEEDKPQILGKIVVAIQILAD 312
LRGH + +++ + L SAS D +W+I GP E GKIV A I
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE-------GKIVDAKAIFTG 224
Query: 313 GDSVHPRVCWHPHKQEILMLAIGNRILKIDSNRVGKGERFSAEEPLKCPVDELINGVQLV 372
+V V WH + + ++ L I R + S LV
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS----------------HLV 268
Query: 373 GKHDGEITELSMCQWLTTRLASASLDGTVKIWDDRKSTPLAVLRPYDGHPVNCVTFLIGP 432
H E+ LS + LA+ S D TV +WD R L ++ H P
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSP 326
Query: 433 HPQHIVLITGGPLNRELKIW 452
H + I+ +G +R L +W
Sbjct: 327 HNETILASSG--TDRRLNVW 344
>sp|Q4R304|RBBP7_MACFA Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2
SV=1
Length = 425
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 76/200 (38%), Gaps = 27/200 (13%)
Query: 253 LRGHTQRVTDMAFFAEDVHLLASASVDGRFFIWNITEGPDEEDKPQILGKIVVAIQILAD 312
LRGH + +++ + L SAS D +W+I GP E GKIV A I
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE-------GKIVDAKAIFTG 224
Query: 313 GDSVHPRVCWHPHKQEILMLAIGNRILKIDSNRVGKGERFSAEEPLKCPVDELINGVQLV 372
+V V WH + + ++ L I R + S LV
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS----------------HLV 268
Query: 373 GKHDGEITELSMCQWLTTRLASASLDGTVKIWDDRKSTPLAVLRPYDGHPVNCVTFLIGP 432
H E+ LS + LA+ S D TV +WD R L ++ H P
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSP 326
Query: 433 HPQHIVLITGGPLNRELKIW 452
H + I+ +G +R L +W
Sbjct: 327 HNETILASSG--TDRRLNVW 344
>sp|Q16576|RBBP7_HUMAN Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1
Length = 425
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 76/200 (38%), Gaps = 27/200 (13%)
Query: 253 LRGHTQRVTDMAFFAEDVHLLASASVDGRFFIWNITEGPDEEDKPQILGKIVVAIQILAD 312
LRGH + +++ + L SAS D +W+I GP E GKIV A I
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE-------GKIVDAKAIFTG 224
Query: 313 GDSVHPRVCWHPHKQEILMLAIGNRILKIDSNRVGKGERFSAEEPLKCPVDELINGVQLV 372
+V V WH + + ++ L I R + S LV
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS----------------HLV 268
Query: 373 GKHDGEITELSMCQWLTTRLASASLDGTVKIWDDRKSTPLAVLRPYDGHPVNCVTFLIGP 432
H E+ LS + LA+ S D TV +WD R L ++ H P
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSP 326
Query: 433 HPQHIVLITGGPLNRELKIW 452
H + I+ +G +R L +W
Sbjct: 327 HNETILASSG--TDRRLNVW 344
>sp|Q60973|RBBP7_MOUSE Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1
Length = 425
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 76/200 (38%), Gaps = 27/200 (13%)
Query: 253 LRGHTQRVTDMAFFAEDVHLLASASVDGRFFIWNITEGPDEEDKPQILGKIVVAIQILAD 312
LRGH + +++ + L SAS D +W+I GP E GKIV A I
Sbjct: 172 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE-------GKIVDAKAIFTG 224
Query: 313 GDSVHPRVCWHPHKQEILMLAIGNRILKIDSNRVGKGERFSAEEPLKCPVDELINGVQLV 372
+V V WH + + ++ L I R + S LV
Sbjct: 225 HSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS----------------HLV 268
Query: 373 GKHDGEITELSMCQWLTTRLASASLDGTVKIWDDRKSTPLAVLRPYDGHPVNCVTFLIGP 432
H E+ LS + LA+ S D TV +WD R L ++ H P
Sbjct: 269 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--LKLHTFESHKDEIFQVHWSP 326
Query: 433 HPQHIVLITGGPLNRELKIW 452
H + I+ +G +R L +W
Sbjct: 327 HNETILASSG--TDRRLNVW 344
>sp|Q10G81|MSI1_ORYSJ Histone-binding protein MSI1 homolog OS=Oryza sativa subsp.
japonica GN=MSI1 PE=2 SV=1
Length = 428
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 30/201 (14%)
Query: 253 LRGHTQRVTDMAF-FAEDVHLLASASVDGRFFIWNITEGPDEEDKPQILGKIVVAIQILA 311
L+GH +++ ++ HLL S S D + +W+I K K + A+QI
Sbjct: 178 LKGHNSEGYGLSWSIFKEGHLL-SGSDDAQICLWDI--------KANSKNKTLDALQIFK 228
Query: 312 DGDSVHPRVCWHPHKQEILMLAIGNRILKIDSNRVGKGERFSAEEPLKCPVDELINGVQL 371
D V V WH + E L ++G+ D N + L+ PV VQ
Sbjct: 229 YHDGVVEDVAWHL-RHEYLFGSVGD-----DHNLLIWD--------LRSPVS--TKPVQS 272
Query: 372 VGKHDGEITELSMCQWLTTRLASASLDGTVKIWDDRKSTPLAVLRPYDGHPVNCVTFLIG 431
V H GE+ L+ + +A+ S D TVK++D RK L +D H F +G
Sbjct: 273 VAAHQGEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKID--TSLHTFDCHKEE--VFQVG 328
Query: 432 PHPQHIVLITGGPLNRELKIW 452
P++ ++ L R L +W
Sbjct: 329 WSPKNETILASCCLGRRLMVW 349
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.127 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 515,990,607
Number of Sequences: 539616
Number of extensions: 23188144
Number of successful extensions: 165427
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 2577
Number of HSP's that attempted gapping in prelim test: 118476
Number of HSP's gapped (non-prelim): 28461
length of query: 1395
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1265
effective length of database: 121,419,379
effective search space: 153595514435
effective search space used: 153595514435
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)