BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039792
(819 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/770 (55%), Positives = 564/770 (73%), Gaps = 36/770 (4%)
Query: 74 VHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGY 133
VH QI + GL+ DT+L+N+L+ YS+A + ARK+F+ M ERNLVSWS++VS G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 134 GEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDV 193
EE+L+VF+ F + P++YILSS I AC+ L G G + Q+ SF++KSGFDRDV
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW--MVFQLQSFLVKSGFDRDV 183
Query: 194 YVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRET 253
YVGT L++ Y K+G++D A+ VFD L K+ V+WTT+I+G VK GRS +SL LF Q+ E
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 254 DVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMA 313
+VV D Y+LS+VLSACS+L F+ GGKQIHAH+LR G+ MD S++NVL+D Y KCGRV A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 314 RRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSV 373
+LF+ + KNIISWTTL+ GY QN+ +EAM+LFT M++ G KPD +ACSS+LTSC S+
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363
Query: 374 EALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMI 433
AL G QVHAY+ KAN+ +D++V NSL+DMYAKCD LT+ARKVFD+ A +VV +NAMI
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMI 423
Query: 434 EGYSK---EEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKY 490
EGYS+ + +L EAL++F +MR + P LLTFVSLL S+S+ SL SKQIHGL+ KY
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKY 483
Query: 491 GVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLY 550
G+ LD+FAGSALID YS C+ KD+RLVFDEM +D+V+WN+M GY QQ ENEEA+ L+
Sbjct: 484 GLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLF 543
Query: 551 LELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKC 610
LEL LS++RP+EFTFA ++TAA NL S++ GQ+FH L+K GL+ + +IT+AL+DMYAKC
Sbjct: 544 LELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKC 603
Query: 611 GSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVL 670
GS EDA++ F S +DV CWNS+I + A+HGE KAL + +M+ EG+EPNYITFVGVL
Sbjct: 604 GSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVL 663
Query: 671 SACSHAGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLLGRN------------------- 711
SACSHAGL+EDGL F+ M FGIEP EHY +VSLLGR
Sbjct: 664 SACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAA 723
Query: 712 -VW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKM 759
VW NVEL +AAEMAI DP DSGS+T+LSN +A MW +AK+VR++M
Sbjct: 724 IVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM 783
Query: 760 DLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIKGV 809
++G++KE GRSWI +N EVH F+++DKSH A+ Y +LD+L++ I+GV
Sbjct: 784 KVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGV 833
Score = 259 bits (661), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 258/469 (55%), Gaps = 9/469 (1%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
KQ+HA I GL+ D L N+L+ +Y K + A KLF+ M +N++SW++L+S Y +
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
+EA+ +F K G +PD Y SS++ +C L G G Q+H++ IK+
Sbjct: 329 ALHKEAMELFTSMSKFGL-KPDMYACSSILTSCASLHALG----FGTQVHAYTIKANLGN 383
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRS---DLSLNLFN 248
D YV SL+++YAK + DA+ VFD V + +I GY + G +LN+F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 249 QMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCG 308
MR + S+L A + L +G KQIH + + G+ +D+ + L+D YS C
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 309 RVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLT 368
+K +R +FDE++VK+++ W ++ GY+Q S + EA+ LF E+ S +PD+F ++++T
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 369 SCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVS 428
+ G++ +++ G++ H K +E + ++ N+L+DMYAKC S +A K FD A R+VV
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC 623
Query: 429 YNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLII 488
+N++I Y+ + +AL + +M + P +TFV +L S +E + L++
Sbjct: 624 WNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML 683
Query: 489 KYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRD-IVVWNAMLLG 536
++G+ + ++ + AR + ++M + +VW ++L G
Sbjct: 684 RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 167/357 (46%), Gaps = 22/357 (6%)
Query: 460 GLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVF 519
G F LL L +S L +HG II +G+ LD + + LI+ YS+ AR VF
Sbjct: 43 GRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVF 102
Query: 520 DEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQ-RPNEFTFAALITAASNLGSL 578
++M +R++V W+ M+ EE++ ++LE +++ PNE+ ++ I A S L
Sbjct: 103 EKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR 162
Query: 579 KHGQ--QFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMIC 636
Q + L+K G D D ++ + LID Y K G+++ A F + K W +MI
Sbjct: 163 GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS 222
Query: 637 TNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAGFGIEP 696
G +L LF +++ + + P+ VLSACS +E G + + +
Sbjct: 223 GCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG----KQIHAHILRY 278
Query: 697 GMEHYASVVSLLGRNVWNVELGRYAAEMAI--SIDPMDSGSYTLLSNTFACNSMWADAKQ 754
G+E AS++++L + V+ GR A + + + S+T L + + N++ +A +
Sbjct: 279 GLEMDASLMNVLIDSY--VKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 755 VRKKMDLDGLMKE-----------AGRSWIEVNNEVHAFVARDKSHHAADLTYSILD 800
+ M GL + A + +VHA+ + + + +T S++D
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLID 393
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 264/753 (35%), Positives = 409/753 (54%), Gaps = 53/753 (7%)
Query: 103 LDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVI- 161
L A LFD R+ S+ SL+ +++ G +EA +F+ ++G D I SSV+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM-EMDCSIFSSVLK 101
Query: 162 ---CACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDG 218
C +L G Q+H IK GF DV VGTSL++ Y K + D + VFD
Sbjct: 102 VSATLCDEL--------FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 219 LMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGG 278
+ + V+WTT+I+GY ++ +D L LF +M+ + + ++ L + G G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 279 KQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQN 338
Q+H V++ G+ + V N L++ Y KCG V+ AR LFD+ EVK++++W ++I GY N
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 339 SFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVK 398
D EA+ +F M + + + + +SV+ C +++ L Q+H K D ++
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 399 NSLVDMYAKCDSLTEARKVF-DVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFV 457
+L+ Y+KC ++ +A ++F ++ NVVS+ AMI G+ + + EA+DLF EM+ V
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 458 PPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARL 517
P T+ +L + + S ++H ++K G+AL+DAY K ++A
Sbjct: 394 RPNEFTYSVIL----TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 518 VFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAAL--ITAASNL 575
VF ++ +DIV W+AML GY Q E E AIK++ EL +PNEFTF+++ + AA+N
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN- 508
Query: 576 GSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMI 635
S+ G+QFH IK LD ++SAL+ MYAK G++E A E F KD+ WNSMI
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 636 CTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMA-GFGI 694
A HG+ MKAL +F+EM ++ + +TF+GV +AC+HAGL+E+G +F M I
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628
Query: 695 EPGMEHYASVVSLLGR--------------------NVW-----------NVELGRYAAE 723
P EH + +V L R +W ELGR AAE
Sbjct: 629 APTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAE 688
Query: 724 MAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFV 783
I++ P DS +Y LLSN +A + W + +VRK M+ + KE G SWIEV N+ ++F+
Sbjct: 689 KIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFL 748
Query: 784 ARDKSHHAADLTYSILDNLILHIKGVGYVPNTS 816
A D+SH D Y L++L +K +GY P+TS
Sbjct: 749 AGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTS 781
Score = 305 bits (780), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/571 (31%), Positives = 311/571 (54%), Gaps = 21/571 (3%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
+Q+H Q G D + L+ Y K ++ RK+FD M ERN+V+W++L+S Y +
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
+E L +F+ G +P+ + ++ + + G GG G Q+H+ V+K+G D+
Sbjct: 173 SMNDEVLTLFMRMQNEGT-QPNSFTFAAALGVLAEEGVGGR----GLQVHTVVVKNGLDK 227
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
+ V SL+NLY K G+V A+ +FD VK+ V+W ++I+GY +G +L +F MR
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
V + +SV+ C+ L+ + +Q+H V++ G D ++ LM YSKC +
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 312 MARRLFDEIE-VKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSC 370
A RLF EI V N++SWT +I G++QN EA+ LF+EM R G +P++F S +LT+
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 371 GSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYN 430
+ E VHA K N E + V +L+D Y K + EA KVF + D+++V+++
Sbjct: 408 PVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 463
Query: 431 AMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSV-FSLESSKQIHGLIIK 489
AM+ GY++ + A+ +F E+ G + P TF S+L + ++ S+ KQ HG IK
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 490 YGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKL 549
+ + SAL+ Y+K + + A VF ++D+V WN+M+ GY Q + +A+ +
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 550 YLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIK-LGLDFDSFITSALIDMYA 608
+ E+ + + + TF + A ++ G ++ G+++ + +++ + S ++D+Y+
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643
Query: 609 KCGSLEDAYETF-------GSTTWKDV--AC 630
+ G LE A + GST W+ + AC
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 194/370 (52%), Gaps = 11/370 (2%)
Query: 309 RVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLT 368
R+ A LFD+ ++ S+ +L+ G+ ++ +EA +LF + R G + D SSVL
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 369 SCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVS 428
++ GRQ+H K D V SLVD Y K + + RKVFD M +RNVV+
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 429 YNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLII 488
+ +I GY++ E L LF M+ P TF + LG+ + Q+H +++
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 489 KYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIK 548
K G+ + ++LI+ Y KC + + AR++FD+ + +V WN+M+ GY + EA+
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 549 LYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYA 608
++ + L+ R +E +FA++I +NL L+ +Q H ++K G FD I +AL+ Y+
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 609 KCGSLEDAYETFGSTTWKDVAC------WNSMICTNAHHGEPMKALLLFREMIIEGLEPN 662
KC ++ DA F K++ C W +MI + +A+ LF EM +G+ PN
Sbjct: 342 KCTAMLDALRLF-----KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPN 396
Query: 663 YITFVGVLSA 672
T+ +L+A
Sbjct: 397 EFTYSVILTA 406
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 185/363 (50%), Gaps = 12/363 (3%)
Query: 64 NNKRITCYKQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMS-ERNLVSWS 122
N K + +Q+H + G D + L+ YSK + A +LF + N+VSW+
Sbjct: 307 NLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWT 366
Query: 123 SLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHS 182
+++S + + EEA+ +F + G RP+++ S ++ A + ++H+
Sbjct: 367 AMISGFLQNDGKEEAVDLFSEMKRKGV-RPNEFTYSVILTALPVISPS--------EVHA 417
Query: 183 FVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDL 242
V+K+ ++R VGT+L++ Y K G V++A VF G+ K V+W+ ++ GY ++G ++
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA 477
Query: 243 SLNLFNQMRETDVVHDKYLLSSVLSACSMLQF-VGGGKQIHAHVLRRGMGMDVSVINVLM 301
++ +F ++ + + +++ SS+L+ C+ +G GKQ H ++ + + V + L+
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALL 537
Query: 302 DFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDF 361
Y+K G ++ A +F K+++SW ++I GY Q+ +A+ +F EM + K D
Sbjct: 538 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV 597
Query: 362 ACSSVLTSCGSVEALEQGRQVHAYSFK-ANIESDNFVKNSLVDMYAKCDSLTEARKVFDV 420
V +C +E+G + + I + +VD+Y++ L +A KV +
Sbjct: 598 TFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIEN 657
Query: 421 MAD 423
M +
Sbjct: 658 MPN 660
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 263/815 (32%), Positives = 419/815 (51%), Gaps = 96/815 (11%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLR-------------------------------NYSKA 100
KQ HA + ISG + TF+ N LL+ YSK+
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 127
Query: 101 NDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVG---NGRPDDYIL 157
ND+ A F+ M R++VSW+S++S Y + G +++ VF+ + G +GR IL
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 158 SSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFD 217
C+ L + ++G Q+H V++ G D DV ++L+++YAK ++ VF
Sbjct: 188 K----VCSFL----EDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 239
Query: 218 GLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGG 277
G+ K +VSW+ II G V++ L+L F +M++ + + + +SVL +C+ L +
Sbjct: 240 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 299
Query: 278 GKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQ 337
G Q+HAH L+ D V +D Y+KC ++ A+ LFD E N S+ +I GY Q
Sbjct: 300 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 359
Query: 338 NSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFV 397
+A+ LF + SG D+ + S V +C V+ L +G Q++ + K+++ D V
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 398 KNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFV 457
N+ +DMY KC +L EA +VFD M R+ VS+NA+I + + K E L LF M +
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 458 PPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARL 517
P TF S+L + SL +IH I+K G+ + G +LID YSKC ++A
Sbjct: 480 EPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
Query: 518 VFDEMNQRD--------------------IVVWNAMLLGYTQQLENEEAIKLYLELLLSQ 557
+ QR V WN+++ GY + ++E+A L+ ++
Sbjct: 539 IHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG 598
Query: 558 QRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAY 617
P++FT+A ++ +NL S G+Q H +IK L D +I S L+DMY+KCG L D+
Sbjct: 599 ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSR 658
Query: 618 ETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAG 677
F + +D WN+MIC AHHG+ +A+ LF MI+E ++PN++TF+ +L AC+H G
Sbjct: 659 LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 718
Query: 678 LIEDGLDHFQSMA-GFGIEPGMEHYASVVSLLGRN--------------------VW--- 713
LI+ GL++F M +G++P + HY+++V +LG++ +W
Sbjct: 719 LIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTL 778
Query: 714 ---------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGL 764
NVE+ A + +DP DS +YTLLSN +A MW +R+ M L
Sbjct: 779 LGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKL 838
Query: 765 MKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSIL 799
KE G SW+E+ +E+H F+ DK+H + Y L
Sbjct: 839 KKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 230/494 (46%), Gaps = 40/494 (8%)
Query: 220 MVKTAVSWTTIITGYVKSGRSDLSLNLF----NQMRETDVVHDKYLLSSVLSACSMLQFV 275
M ++ VS+ +T + S R S + F NQ+ + S V C+ +
Sbjct: 10 MTRSVVSFNRCLTEKI-SYRRVPSFSYFTDFLNQVNSVSTTN----FSFVFKECAKQGAL 64
Query: 276 GGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLI--- 332
GKQ HAH++ G V+N L+ Y+ A +FD++ +++++SW +I
Sbjct: 65 ELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGY 124
Query: 333 ----------------------------GGYMQNSFDREAMKLFTEMTRSGWKPDDFACS 364
GY+QN +++++F +M R G + D +
Sbjct: 125 SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFA 184
Query: 365 SVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADR 424
+L C +E G Q+H + ++D ++L+DMYAK E+ +VF + ++
Sbjct: 185 IILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK 244
Query: 425 NVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIH 484
N VS++A+I G + LS AL F EM+ + S+L +++ L Q+H
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLH 304
Query: 485 GLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENE 544
+K D +A +D Y+KC + +DA+++FD + +NAM+ GY+Q+
Sbjct: 305 AHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGF 364
Query: 545 EAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALI 604
+A+ L+ L+ S +E + + + A + + L G Q + IK L D + +A I
Sbjct: 365 KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAI 424
Query: 605 DMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYI 664
DMY KC +L +A+ F +D WN++I + +G+ + L LF M+ +EP+
Sbjct: 425 DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEF 484
Query: 665 TFVGVLSACSHAGL 678
TF +L AC+ L
Sbjct: 485 TFGSILKACTGGSL 498
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 244/779 (31%), Positives = 413/779 (53%), Gaps = 37/779 (4%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
+Q+HA+I GL+ T + N L+ YS+ +D AR++FD + ++ SW +++S +K
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
EA+ +F +G P Y SSV+ AC ++ + +GEQ+H V+K GF
Sbjct: 267 ECEAEAIRLFCDMYVLGI-MPTPYAFSSVLSACKKI----ESLEIGEQLHGLVLKLGFSS 321
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
D YV +L++LY G++ A+ +F + + AV++ T+I G + G + ++ LF +M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
+ D L+S++ ACS + G+Q+HA+ + G + + L++ Y+KC ++
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCG 371
A F E EV+N++ W ++ Y R + ++F +M P+ + S+L +C
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 372 SVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNA 431
+ LE G Q+H+ K N + + +V + L+DMYAK L A + A ++VVS+
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTT 561
Query: 432 MIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYG 491
MI GY++ +AL F +M + + + + + + +L+ +QIH G
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 621
Query: 492 VFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYL 551
D+ +AL+ YS+C +++ L F++ D + WNA++ G+ Q NEEA+++++
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 552 ELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCG 611
+ N FTF + + AAS ++K G+Q H + K G D ++ + +ALI MYAKCG
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 741
Query: 612 SLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLS 671
S+ DA + F + K+ WN++I + HG +AL F +MI + PN++T VGVLS
Sbjct: 742 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 801
Query: 672 ACSHAGLIEDGLDHFQSM-AGFGIEPGMEHYASVVSLLGRN------------------- 711
ACSH GL++ G+ +F+SM + +G+ P EHY VV +L R
Sbjct: 802 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 861
Query: 712 -VW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKM 759
VW N+E+G +AA + ++P DS +Y LLSN +A + W R+KM
Sbjct: 862 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKM 921
Query: 760 DLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIKGVGYVPNTSAL 818
G+ KE G+SWIEV N +H+F D++H AD + +L +GYV + +L
Sbjct: 922 KEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSL 980
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 197/676 (29%), Positives = 332/676 (49%), Gaps = 7/676 (1%)
Query: 35 RNPSLQSFNISTKRSVLAWFLQRPLPDNFNNKRITCYKQVHAQIAISGLQCDTFLANMLL 94
R S+++ I L W L+ L N + +++H+QI GL + L+ L
Sbjct: 71 RIDSVENRGIRPNHQTLKWLLEGCLK---TNGSLDEGRKLHSQILKLGLDSNGCLSEKLF 127
Query: 95 RNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDD 154
Y DL GA K+FD M ER + +W+ ++ + E +F+ + N P++
Sbjct: 128 DFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS-ENVTPNE 186
Query: 155 YILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKF 214
S V+ AC GG +V EQ+H+ ++ G V L++LY++NG VD A+
Sbjct: 187 GTFSGVLEACR---GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARR 243
Query: 215 VFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQF 274
VFDGL +K SW +I+G K+ ++ LF M ++ Y SSVLSAC ++
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIES 303
Query: 275 VGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGG 334
+ G+Q+H VL+ G D V N L+ Y G + A +F + ++ +++ TLI G
Sbjct: 304 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING 363
Query: 335 YMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESD 394
Q + +AM+LF M G +PD +S++ +C + L +G+Q+HAY+ K S+
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN 423
Query: 395 NFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRV 454
N ++ +L+++YAKC + A F NVV +N M+ Y + L + +F +M++
Sbjct: 424 NKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI 483
Query: 455 GFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKD 514
+ P T+ S+L + LE +QIH IIK L+ + S LID Y+K
Sbjct: 484 EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 543
Query: 515 ARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASN 574
A + +D+V W M+ GYTQ +++A+ + ++L R +E ++A +
Sbjct: 544 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 603
Query: 575 LGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSM 634
L +LK GQQ H G D +AL+ +Y++CG +E++Y F T D WN++
Sbjct: 604 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 663
Query: 635 ICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAGFGI 694
+ G +AL +F M EG++ N TF + A S ++ G + G
Sbjct: 664 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY 723
Query: 695 EPGMEHYASVVSLLGR 710
+ E +++S+ +
Sbjct: 724 DSETEVCNALISMYAK 739
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 255/774 (32%), Positives = 409/774 (52%), Gaps = 67/774 (8%)
Query: 100 ANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSS 159
A+ + GA +F + S R+ W L+ + EA++ ++ + +G +PD+Y +
Sbjct: 45 ASAVSGAPSIFISQS-RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGI-KPDNYAFPA 102
Query: 160 VICACTQLGGGGDGGNVGEQMHSFVIKSGFDRD-VYVGTSLMNLYAKNGSVDDAKFVFDG 218
++ A L +G+Q+H+ V K G+ D V V +L+NLY K G VFD
Sbjct: 103 LLKAVADL----QDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 219 LMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGG- 277
+ + VSW ++I+ + +++L F M + +V + L SV++ACS L G
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 278 --GKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGY 335
GKQ+HA+ LR+G ++ +IN L+ Y K G++ ++ L +++++W T++
Sbjct: 219 MMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 336 MQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFK-ANIESD 394
QN EA++ EM G +PD+F SSVL +C +E L G+++HAY+ K +++ +
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 395 NFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRV 454
+FV ++LVDMY C + R+VFD M DR + +NAMI GYS+ E EAL LF M
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 455 GFVPPGLLTFVSLLG------LSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSK 508
GLL + + + S FS + + IHG ++K G+ D F + L+D YS+
Sbjct: 398 S---AGLLANSTTMAGVVPACVRSGAFSRKEA--IHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 509 CFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLY-----LELLLSQQ----- 558
A +F +M RD+V WN M+ GY +E+A+ L LE +S+
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 559 -RPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAY 617
+PN T ++ + + L +L G++ H + IK L D + SAL+DMYAKCG L+ +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 618 ETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAG 677
+ F K+V WN +I HG +A+ L R M+++G++PN +TF+ V +ACSH+G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 678 LIEDGLDHFQSM-AGFGIEPGMEHYASVVSLLGR---------------------NVW-- 713
++++GL F M +G+EP +HYA VV LLGR W
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 714 ---------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGL 764
N+E+G AA+ I ++P + Y LL+N ++ +W A +VR+ M G+
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 765 MKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIKGVGYVPNTSAL 818
KE G SWIE +EVH FVA D SH ++ L+ L ++ GYVP+TS +
Sbjct: 753 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCV 806
Score = 288 bits (738), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 193/653 (29%), Positives = 340/653 (52%), Gaps = 30/653 (4%)
Query: 72 KQVHAQIAISGLQCDTF-LANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTK 130
KQ+HA + G D+ +AN L+ Y K D K+FD +SERN VSW+SL+S
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 131 KGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFD 190
E AL F L N P + L SV+ AC+ L +G +G+Q+H++ ++ G +
Sbjct: 177 FEKWEMALEAFRCMLD-ENVEPSSFTLVSVVTACSNL-PMPEGLMMGKQVHAYGLRKG-E 233
Query: 191 RDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQM 250
+ ++ +L+ +Y K G + +K + + V+W T+++ ++ + +L +M
Sbjct: 234 LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293
Query: 251 RETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRG-MGMDVSVINVLMDFYSKCGR 309
V D++ +SSVL ACS L+ + GK++HA+ L+ G + + V + L+D Y C +
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 310 VKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRS-GWKPDDFACSSVLT 368
V RR+FD + + I W +I GY QN D+EA+ LF M S G + + V+
Sbjct: 354 VLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 369 SCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVS 428
+C A + +H + K ++ D FV+N+L+DMY++ + A ++F M DR++V+
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473
Query: 429 YNAMIEGYSKEEKLSEALDLFHEM------------RVGFVPPGLLTFVSLLGLSSSVFS 476
+N MI GY E +AL L H+M RV + P +T +++L +++ +
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS-LKPNSITLMTILPSCAALSA 532
Query: 477 LESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLG 536
L K+IH IK + DV GSAL+D Y+KC + +R VFD++ Q++++ WN +++
Sbjct: 533 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 592
Query: 537 YTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQ-FHNHLIKLGLDF 595
Y +EAI L +++ +PNE TF ++ A S+ G + G + F+ G++
Sbjct: 593 YGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP 652
Query: 596 DSFITSALIDMYAKCGSLEDAYETFG--STTWKDVACWNSMICTNAHHGEPMKALLLFRE 653
S + ++D+ + G +++AY+ + W+S++ + H + +
Sbjct: 653 SSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQN 712
Query: 654 MIIEGLEPNYIT-FVGVLSACSHAGLIEDGLDHFQSMAGFGI--EPG---MEH 700
+I LEPN + +V + + S AGL + + ++M G+ EPG +EH
Sbjct: 713 LI--QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEH 763
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 245/708 (34%), Positives = 391/708 (55%), Gaps = 49/708 (6%)
Query: 151 RP-DDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSV 209
RP D SS++ +C + +G+ +H+ +I+ + D + SL++LY+K+G
Sbjct: 58 RPMDSVTFSSLLKSCIR----ARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113
Query: 210 DDAKFVFDGLM---VKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVL 266
A+ VF+ + + VSW+ ++ Y +GR ++ +F + E +V + Y ++V+
Sbjct: 114 AKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVI 173
Query: 267 SACSMLQFVGGGKQIHAHVLRRG-MGMDVSVINVLMDFYSKC-GRVKMARRLFDEIEVKN 324
ACS FVG G+ +++ G DV V L+D + K + A ++FD++ N
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233
Query: 325 IISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHA 384
+++WT +I MQ F REA++ F +M SG++ D F SSV ++C +E L G+Q+H+
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Query: 385 YSFKANIESDNFVKNSLVDMYAKCD---SLTEARKVFDVMADRNVVSYNAMIEGYSKEEK 441
++ ++ + D V+ SLVDMYAKC S+ + RKVFD M D +V+S+ A+I GY K
Sbjct: 294 WAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCN 351
Query: 442 L-SEALDLFHEMRV-GFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAG 499
L +EA++LF EM G V P TF S ++ KQ+ G K G+ +
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 500 SALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQR 559
+++I + K +DA+ F+ ++++++V +N L G + L E+A KL E+ +
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
Query: 560 PNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYET 619
+ FTFA+L++ +N+GS++ G+Q H+ ++KLGL + + +ALI MY+KCGS++ A
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 620 FGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLI 679
F ++V W SMI A HG ++ L F +MI EG++PN +T+V +LSACSH GL+
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 680 EDGLDHFQSM-AGFGIEPGMEHYASVVSLLGRN--------------------VW----- 713
+G HF SM I+P MEHYA +V LL R VW
Sbjct: 592 SEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLG 651
Query: 714 ------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKE 767
N ELG+ AA + +DP + +Y LSN +AC W ++ ++R+KM L+KE
Sbjct: 652 ACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKE 711
Query: 768 AGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIKGVGYVPNT 815
G SWIEV +++H F D +H A Y LD LI IK GYVP+T
Sbjct: 712 GGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDT 759
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 192/607 (31%), Positives = 335/607 (55%), Gaps = 29/607 (4%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTM---SERNLVSWSSLVSMY 128
K VHA++ ++ D+ L N L+ YSK+ D A +F+TM +R++VSWS++++ Y
Sbjct: 82 KLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACY 141
Query: 129 TKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSG 188
G +A+ VF+ FL++G P+DY ++VI AC+ D VG F++K+G
Sbjct: 142 GNNGRELDAIKVFVEFLELG-LVPNDYCYTAVIRACSN----SDFVGVGRVTLGFLMKTG 196
Query: 189 -FDRDVYVGTSLMNLYAK-NGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNL 246
F+ DV VG SL++++ K S ++A VFD + V+WT +IT ++ G ++
Sbjct: 197 HFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256
Query: 247 FNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSK 306
F M + DK+ LSSV SAC+ L+ + GKQ+H+ +R G+ DV L+D Y+K
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAK 314
Query: 307 C---GRVKMARRLFDEIEVKNIISWTTLIGGYMQN-SFDREAMKLFTEMTRSGW-KPDDF 361
C G V R++FD +E +++SWT LI GYM+N + EA+ LF+EM G +P+ F
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374
Query: 362 ACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVM 421
SS +CG++ G+QV +FK + S++ V NS++ M+ K D + +A++ F+ +
Sbjct: 375 TFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Query: 422 ADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSK 481
+++N+VSYN ++G + +A L E+ + TF SLL ++V S+ +
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 482 QIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQL 541
QIH ++K G+ + +ALI YSKC S A VF+ M R+++ W +M+ G+ +
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 542 ENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQ-----FHNHLIKLGLDFD 596
++ + +++ +PNE T+ A+++A S++G + G + + +H IK ++
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEH- 613
Query: 597 SFITSALIDMYAKCGSLEDAYETFGSTTWK-DVACWNSMICTNAHHGEPMKALLLFREMI 655
+ ++D+ + G L DA+E + ++ DV W + + H L R+++
Sbjct: 614 ---YACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKIL 670
Query: 656 IEGLEPN 662
L+PN
Sbjct: 671 --ELDPN 675
Score = 217 bits (553), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 255/478 (53%), Gaps = 34/478 (7%)
Query: 101 NDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSV 160
N + A K+FD MSE N+V+W+ +++ + G+ EA+ F+ + G D + LSSV
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG-FESDKFTLSSV 275
Query: 161 ICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAK---NGSVDDAKFVFD 217
AC +L + ++G+Q+HS+ I+SG DV SL+++YAK +GSVDD + VFD
Sbjct: 276 FSACAEL----ENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFD 329
Query: 218 GLMVKTAVSWTTIITGYVKSGR-SDLSLNLFNQM-RETDVVHDKYLLSSVLSACSMLQFV 275
+ + +SWT +ITGY+K+ + ++NLF++M + V + + SS AC L
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 276 GGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGY 335
GKQ+ +RG+ + SV N ++ + K R++ A+R F+ + KN++S+ T + G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 336 MQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDN 395
+N +A KL +E+T F +S+L+ +V ++ +G Q+H+ K + +
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 396 FVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVG 455
V N+L+ MY+KC S+ A +VF+ M +RNV+S+ +MI G++K L+ F++M
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 456 FVPPGLLTFVSLLGLSSSV----------FSLESSKQIHGLIIKYGVFLDVFAGSALI-D 504
V P +T+V++L S V S+ +I + Y +D+ + L+ D
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 505 AYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNE 562
A+ F N + F Q D++VW LG + N E KL +L + PNE
Sbjct: 630 AFE--FINT---MPF----QADVLVWRT-FLGACRVHSNTELGKLAARKIL-ELDPNE 676
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 115/236 (48%), Gaps = 7/236 (2%)
Query: 445 ALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALID 504
ALDL R G P +TF SLL K +H +I++ + D ++LI
Sbjct: 48 ALDLM--ARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLIS 105
Query: 505 AYSKCFSNKDARLVFDEMN---QRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPN 561
YSK + A VF+ M +RD+V W+AM+ Y +AIK+++E L PN
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Query: 562 EFTFAALITAASNLGSLKHGQQFHNHLIKLG-LDFDSFITSALIDMYAKC-GSLEDAYET 619
++ + A+I A SN + G+ L+K G + D + +LIDM+ K S E+AY+
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 620 FGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSH 675
F + +V W MI G P +A+ F +M++ G E + T V SAC+
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/671 (33%), Positives = 362/671 (53%), Gaps = 32/671 (4%)
Query: 178 EQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKS 237
Q+ V K+G ++ + T L++L+ + GSVD+A VF+ + K V + T++ G+ K
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 238 GRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVI 297
D +L F +MR DV Y + +L C + GK+IH +++ G +D+ +
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 298 NVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWK 357
L + Y+KC +V AR++FD + ++++SW T++ GY QN R A+++ M K
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 358 PDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKV 417
P SVL + ++ + G+++H Y+ ++ +S + +LVDMYAKC SL AR++
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 418 FDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSL 477
FD M +RNVVS+N+MI+ Y + E EA+ +F +M V P ++ + L + + L
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL 353
Query: 478 ESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGY 537
E + IH L ++ G+ +V ++LI Y KC A +F ++ R +V WNAM+LG+
Sbjct: 354 ERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGF 413
Query: 538 TQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDS 597
Q +A+ + ++ +P+ FT+ ++ITA + L H + H +++ LD +
Sbjct: 414 AQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNV 473
Query: 598 FITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIE 657
F+T+AL+DMYAKCG++ A F + + V WN+MI HG AL LF EM
Sbjct: 474 FVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG 533
Query: 658 GLEPNYITFVGVLSACSHAGLIEDGLDHFQSMA-GFGIEPGMEHYASVVSLLGR------ 710
++PN +TF+ V+SACSH+GL+E GL F M + IE M+HY ++V LLGR
Sbjct: 534 TIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNE 593
Query: 711 --------------NVW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFAC 745
NV+ NV AAE ++P D G + LL+N +
Sbjct: 594 AWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRA 653
Query: 746 NSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILH 805
SMW QVR M GL K G S +E+ NEVH+F + +H + Y+ L+ LI H
Sbjct: 654 ASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICH 713
Query: 806 IKGVGYVPNTS 816
IK GYVP+T+
Sbjct: 714 IKEAGYVPDTN 724
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/606 (29%), Positives = 327/606 (53%), Gaps = 21/606 (3%)
Query: 23 SSNLLK--SVTFSPRNPSLQSFNISTKRSVLAWFLQRPLPDNFNN-KRITCYKQVHAQIA 79
SS L++ +V P PS +S + + A + P + +Q+ +
Sbjct: 2 SSQLVQFSTVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVF 61
Query: 80 ISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALM 139
+GL + F L+ + + +D A ++F+ + + V + +++ + K ++AL
Sbjct: 62 KNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQ 121
Query: 140 VFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGN--VGEQMHSFVIKSGFDRDVYVGT 197
F+ ++ + P Y + ++ C GD VG+++H ++KSGF D++ T
Sbjct: 122 FFVR-MRYDDVEPVVYNFTYLLKVC------GDEAELRVGKEIHGLLVKSGFSLDLFAMT 174
Query: 198 SLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVH 257
L N+YAK V++A+ VFD + + VSW TI+ GY ++G + ++L + M E ++
Sbjct: 175 GLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKP 234
Query: 258 DKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLF 317
+ SVL A S L+ + GK+IH + +R G V++ L+D Y+KCG ++ AR+LF
Sbjct: 235 SFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
Query: 318 DEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALE 377
D + +N++SW ++I Y+QN +EAM +F +M G KP D + L +C + LE
Sbjct: 295 DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Query: 378 QGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYS 437
+GR +H S + ++ + V NSL+ MY KC + A +F + R +VS+NAMI G++
Sbjct: 355 RGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA 414
Query: 438 KEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVF 497
+ + +AL+ F +MR V P T+VS++ + + +K IHG++++ + +VF
Sbjct: 415 QNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVF 474
Query: 498 AGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQ 557
+AL+D Y+KC + ARL+FD M++R + WNAM+ GY + A++L+ E+
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 534
Query: 558 QRPNEFTFAALITAASNLGSLKHGQQF-----HNHLIKLGLDFDSFITSALIDMYAKCGS 612
+PN TF ++I+A S+ G ++ G + N+ I+L +D A++D+ + G
Sbjct: 535 IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDH----YGAMVDLLGRAGR 590
Query: 613 LEDAYE 618
L +A++
Sbjct: 591 LNEAWD 596
Score = 219 bits (558), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 220/408 (53%), Gaps = 3/408 (0%)
Query: 265 VLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKN 324
+L CS L+ + +QI V + G+ + L+ + + G V A R+F+ I+ K
Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 325 IISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHA 384
+ + T++ G+ + S +A++ F M +P + + +L CG L G+++H
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 385 YSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSE 444
K+ D F L +MYAKC + EARKVFD M +R++VS+N ++ GYS+
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 445 ALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALID 504
AL++ M + P +T VS+L S++ + K+IHG ++ G V +AL+D
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 505 AYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFT 564
Y+KC S + AR +FD M +R++V WN+M+ Y Q +EA+ ++ ++L +P + +
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 565 FAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTT 624
+ A ++LG L+ G+ H ++LGLD + + ++LI MY KC ++ A FG
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 625 WKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSA 672
+ + WN+MI A +G P+ AL F +M ++P+ T+V V++A
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 192/343 (55%), Gaps = 7/343 (2%)
Query: 366 VLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRN 425
+L C S++ L RQ+ FK + ++F + LV ++ + S+ EA +VF+ + +
Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 426 VVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHG 485
V Y+ M++G++K L +AL F MR V P + F LL + L K+IHG
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 486 LIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEE 545
L++K G LD+FA + L + Y+KC +AR VFD M +RD+V WN ++ GY+Q
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 546 AIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALID 605
A+++ + +P+ T +++ A S L + G++ H + ++ G D I++AL+D
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 606 MYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYIT 665
MYAKCGSLE A + F ++V WNSMI + P +A+L+F++M+ EG++P ++
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 666 FVGVLSACSHAGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLL 708
+G L AC+ G +E G + + +E G++ SVV+ L
Sbjct: 340 VMGALHACADLGDLERG----RFIHKLSVELGLDRNVSVVNSL 378
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 194/378 (51%), Gaps = 9/378 (2%)
Query: 59 LPDNFNNKRITCYKQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNL 118
LP + I+ K++H SG ++ L+ Y+K L+ AR+LFD M ERN+
Sbjct: 243 LPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNV 302
Query: 119 VSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGE 178
VSW+S++ Y + +EA+++F L G +P D + + AC LG G
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGV-KPTDVSVMGALHACADLG----DLERGR 357
Query: 179 QMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSG 238
+H ++ G DR+V V SL+++Y K VD A +F L +T VSW +I G+ ++G
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNG 417
Query: 239 RSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVIN 298
R +LN F+QMR V D + SV++A + L K IH V+R + +V V
Sbjct: 418 RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT 477
Query: 299 VLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKP 358
L+D Y+KCG + +AR +FD + +++ +W +I GY + F + A++LF EM + KP
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
Query: 359 DDFACSSVLTSCGSVEALEQGRQVHAYSFKAN--IESDNFVKNSLVDMYAKCDSLTEARK 416
+ SV+++C +E G + Y K N IE ++VD+ + L EA
Sbjct: 538 NGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWD 596
Query: 417 VFDVMADRNVVS-YNAMI 433
M + V+ Y AM+
Sbjct: 597 FIMQMPVKPAVNVYGAML 614
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/778 (30%), Positives = 393/778 (50%), Gaps = 40/778 (5%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSER--NLVSWSSLVSMYT 129
KQVHA + ++ + D++ +L Y+ K+F + R ++ W+S++S +
Sbjct: 55 KQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFV 114
Query: 130 KKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGF 189
+ G +AL + L G PD ++ AC L + + + S G
Sbjct: 115 RNGLLNQALAFYFKMLCFGVS-PDVSTFPCLVKACVALKNFKGIDFLSDTVSSL----GM 169
Query: 190 DRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQ 249
D + +V +SL+ Y + G +D +FD ++ K V W ++ GY K G D + F+
Sbjct: 170 DCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSV 229
Query: 250 MRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGR 309
MR + + VLS C+ + G Q+H V+ G+ + S+ N L+ YSKCGR
Sbjct: 230 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 310 VKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTS 369
A +LF + + ++W +I GY+Q+ E++ F EM SG PD SS+L S
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 370 CGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSY 429
E LE +Q+H Y + +I D F+ ++L+D Y KC ++ A+ +F +VV +
Sbjct: 350 VSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF 409
Query: 430 NAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIK 489
AMI GY ++L++F + + P +T VS+L + + +L+ +++HG IIK
Sbjct: 410 TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIK 469
Query: 490 YGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKL 549
G G A+ID Y+KC A +F+ +++RDIV WN+M+ Q AI +
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 550 YLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAK 609
+ ++ +S + + +A ++A +NL S G+ H +IK L D + S LIDMYAK
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAK 589
Query: 610 CGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIE-GLEPNYITFVG 668
CG+L+ A F + K++ WNS+I +HG+ +L LF EM+ + G+ P+ ITF+
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE 649
Query: 669 VLSACSHAGLIEDGLDHFQSMA-GFGIEPGMEHYASVVSLLGR----------------- 710
++S+C H G +++G+ F+SM +GI+P EHYA VV L GR
Sbjct: 650 IISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFP 709
Query: 711 ---NVW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVR 756
VW NVEL A+ + +DP +SG Y L+SN A W +VR
Sbjct: 710 PDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVR 769
Query: 757 KKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIKGVGYVPN 814
M + K G SWIE+N H FV+ D +H + YS+L++L+ ++ GY+P
Sbjct: 770 SLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQ 827
Score = 265 bits (678), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 157/501 (31%), Positives = 264/501 (52%), Gaps = 2/501 (0%)
Query: 177 GEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAV--SWTTIITGY 234
G+Q+H+F+I + D Y ++ +YA GS D +F L ++ + W +II+ +
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSF 113
Query: 235 VKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDV 294
V++G + +L + +M V D ++ AC L+ G + V GM +
Sbjct: 114 VRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNE 173
Query: 295 SVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRS 354
V + L+ Y + G++ + +LFD + K+ + W ++ GY + +K F+ M
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 355 GWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEA 414
P+ VL+ C S ++ G Q+H + ++ + +KNSL+ MY+KC +A
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 415 RKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSV 474
K+F +M+ + V++N MI GY + + E+L F+EM V P +TF SLL S
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 475 FSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAML 534
+LE KQIH I+++ + LD+F SALIDAY KC A+ +F + N D+VV+ AM+
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 535 LGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLD 594
GY ++++++ L+ + PNE T +++ L +LK G++ H +IK G D
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD 473
Query: 595 FDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREM 654
I A+IDMYAKCG + AYE F + +D+ WNSMI A P A+ +FR+M
Sbjct: 474 NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Query: 655 IIEGLEPNYITFVGVLSACSH 675
+ G+ + ++ LSAC++
Sbjct: 534 GVSGICYDCVSISAALSACAN 554
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 223/445 (50%), Gaps = 6/445 (1%)
Query: 262 LSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIE 321
LS +L ACS + GKQ+HA ++ + D ++ Y+ CG ++F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 322 VK--NIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQG 379
++ +I W ++I +++N +A+ + +M G PD ++ +C +++ +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 380 RQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKE 439
+ ++ + FV +SL+ Y + + K+FD + ++ V +N M+ GY+K
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 440 EKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAG 499
L + F MR+ + P +TF +L + +S ++ Q+HGL++ GV +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 500 SALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQR 559
++L+ YSKC DA +F M++ D V WN M+ GY Q EE++ + E++ S
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 560 PNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYET 619
P+ TF++L+ + S +L++ +Q H ++++ + D F+TSALID Y KC + A
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 620 FGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLI 679
F DV + +MI H+G + +L +FR ++ + PN IT V +L I
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIG----I 453
Query: 680 EDGLDHFQSMAGFGIEPGMEHYASV 704
L + + GF I+ G ++ ++
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNI 478
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/689 (33%), Positives = 367/689 (53%), Gaps = 35/689 (5%)
Query: 161 ICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLM 220
+C+ QL G+++ +F+ +GF D +G+ L +Y G + +A VFD +
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK 156
Query: 221 VKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQ 280
++ A+ W ++ KSG S+ LF +M + V D Y S V + S L+ V GG+Q
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 216
Query: 281 IHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSF 340
+H +L+ G G SV N L+ FY K RV AR++FDE+ +++ISW ++I GY+ N
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 341 DREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNS 400
+ + +F +M SG + D SV C + GR VH+ KA ++ N+
Sbjct: 277 AEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT 336
Query: 401 LVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPG 460
L+DMY+KC L A+ VF M+DR+VVSY +MI GY++E EA+ LF EM + P
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 461 LLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFD 520
+ T ++L + L+ K++H I + + D+F +AL+D Y+KC S ++A LVF
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 521 EMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQR--PNEFTFAALITAASNLGSL 578
EM +DI+ WN ++ GY++ EA+ L+ LLL ++R P+E T A ++ A ++L +
Sbjct: 457 EMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 579 KHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTN 638
G++ H ++++ G D + ++L+DMYAKCG+L A+ F KD+ W MI
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 575
Query: 639 AHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMA-GFGIEPG 697
HG +A+ LF +M G+E + I+FV +L ACSH+GL+++G F M IEP
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635
Query: 698 MEHYASVVSLLGR--------------------NVW-----------NVELGRYAAEMAI 726
+EHYA +V +L R +W +V+L AE
Sbjct: 636 VEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF 695
Query: 727 SIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARD 786
++P ++G Y L++N +A W K++RK++ GL K G SWIE+ V+ FVA D
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755
Query: 787 KSHHAADLTYSILDNLILHIKGVGYVPNT 815
S+ + + L + + GY P T
Sbjct: 756 SSNPETENIEAFLRKVRARMIEEGYSPLT 784
Score = 289 bits (740), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 306/579 (52%), Gaps = 19/579 (3%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
K+V I +G D+ L + L Y+ DL A ++FD + + W+ L++ K
Sbjct: 114 KEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKS 173
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
G ++ +F + G D Y S V + + L + GEQ+H F++KSGF
Sbjct: 174 GDFSGSIGLFKKMMSSGV-EMDSYTFSCVSKSFSSL----RSVHGGEQLHGFILKSGFGE 228
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
VG SL+ Y KN VD A+ VFD + + +SW +II GYV +G ++ L++F QM
Sbjct: 229 RNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML 288
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
+ + D + SV + C+ + + G+ +H+ ++ + N L+D YSKCG +
Sbjct: 289 VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCG 371
A+ +F E+ ++++S+T++I GY + EA+KLF EM G PD + ++VL C
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 372 SVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNA 431
L++G++VH + + ++ D FV N+L+DMYAKC S+ EA VF M ++++S+N
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 432 MIEGYSKEEKLSEALDLFH----EMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLI 487
+I GYSK +EAL LF+ E R P T +L +S+ + + ++IHG I
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKR---FSPDERTVACVLPACASLSAFDKGREIHGYI 525
Query: 488 IKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAI 547
++ G F D ++L+D Y+KC + A ++FD++ +D+V W M+ GY +EAI
Sbjct: 526 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 585
Query: 548 KLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHN---HLIKLGLDFDSFITSALI 604
L+ ++ + +E +F +L+ A S+ G + G +F N H K+ + + + ++
Sbjct: 586 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY--ACIV 643
Query: 605 DMYAKCGSLEDAYETFGSTTW-KDVACWNSMIC-TNAHH 641
DM A+ G L AY + D W +++C HH
Sbjct: 644 DMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHH 682
Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 248/499 (49%), Gaps = 8/499 (1%)
Query: 185 IKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSL 244
I+SG YV + +L + VD FD ++ T + + +SG + ++
Sbjct: 27 IRSGVRVRKYVIFNRASLRTVSDCVDSIT-TFD----RSVTDANTQLRRFCESGNLENAV 81
Query: 245 NLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFY 304
L + D+ D L SVL C+ + + GK++ + G +D ++ + L Y
Sbjct: 82 KLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMY 139
Query: 305 SKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACS 364
+ CG +K A R+FDE++++ + W L+ ++ ++ LF +M SG + D + S
Sbjct: 140 TNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFS 199
Query: 365 SVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADR 424
V S S+ ++ G Q+H + K+ N V NSLV Y K + ARKVFD M +R
Sbjct: 200 CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER 259
Query: 425 NVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIH 484
+V+S+N++I GY + L +F +M V + L T VS+ + + + +H
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 485 GLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENE 544
+ +K + + L+D YSKC A+ VF EM+ R +V + +M+ GY ++
Sbjct: 320 SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAG 379
Query: 545 EAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALI 604
EA+KL+ E+ P+ +T A++ + L G++ H + + L FD F+++AL+
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM 439
Query: 605 DMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEG-LEPNY 663
DMYAKCGS+++A F KD+ WN++I + + +AL LF ++ E P+
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 499
Query: 664 ITFVGVLSACSHAGLIEDG 682
T VL AC+ + G
Sbjct: 500 RTVACVLPACASLSAFDKG 518
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/650 (35%), Positives = 353/650 (54%), Gaps = 37/650 (5%)
Query: 177 GEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVK 236
G +H +I++G + L+N YAK G + A +F+ ++ K VSW ++ITGY +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 237 SG---RSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMD 293
+G S + LF +MR D++ + Y L+ + A S LQ G+Q HA V++ D
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 294 VSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTR 353
+ V L+ Y K G V+ ++F + +N +W+T++ GY EA+K+F R
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 354 SGWK--PDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSL 411
+ D+ ++VL+S + + GRQ+H + K + + N+LV MY+KC+SL
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 412 TEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLS 471
EA K+FD DRN ++++AM+ GYS+ + EA+ LF M + P T V +L
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 472 SSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWN 531
S + LE KQ+H ++K G +FA +AL+D Y+K DAR FD + +RD+ +W
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 532 AMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKL 591
+++ GY Q +NEEA+ LY + + PN+ T A+++ A S+L +L+ G+Q H H IK
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 592 GLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLF 651
G + I SAL MY+KCGSLED F T KDV WN+MI +H+G+ +AL LF
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512
Query: 652 REMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAG-FGIEPGMEHYASVVSLLGR 710
EM+ EG+EP+ +TFV ++SACSH G +E G +F M+ G++P ++HYA +V LL R
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSR 572
Query: 711 N--------------------VWNV-----------ELGRYAAEMAISIDPMDSGSYTLL 739
+W + ELG YA E +++ +S +Y L
Sbjct: 573 AGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQL 632
Query: 740 SNTFACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSH 789
S + D ++V K M +G+ KE G SWIE+ N+ H FV D H
Sbjct: 633 SGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMH 682
Score = 232 bits (592), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 245/448 (54%), Gaps = 19/448 (4%)
Query: 40 QSFNISTKRSVLAWF----LQRPLPDNFNNKRI----------TCYKQVHAQIAISGLQC 85
Q+ IS+ +V+ F Q LP+ + I T +Q HA +
Sbjct: 92 QNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG 151
Query: 86 DTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFL 145
D ++ L+ Y KA ++ K+F M ERN +WS++VS Y +G EEA+ VF FL
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
Query: 146 KVGN-GRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYA 204
+ G DY+ ++V+ + G +G Q+H IK+G V + +L+ +Y+
Sbjct: 212 REKEEGSDSDYVFTAVLSSLAATIYVG----LGRQIHCITIKNGLLGFVALSNALVTMYS 267
Query: 205 KNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSS 264
K S+++A +FD + +++W+ ++TGY ++G S ++ LF++M + +Y +
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 265 VLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKN 324
VL+ACS + ++ GKQ+H+ +L+ G + L+D Y+K G + AR+ FD ++ ++
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387
Query: 325 IISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHA 384
+ WT+LI GY+QNS + EA+ L+ M +G P+D +SVL +C S+ LE G+QVH
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447
Query: 385 YSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSE 444
++ K + + ++L MY+KC SL + VF +++VVS+NAMI G S + E
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE 507
Query: 445 ALDLFHEMRVGFVPPGLLTFVSLLGLSS 472
AL+LF EM + P +TFV+++ S
Sbjct: 508 ALELFEEMLAEGMEPDDVTFVNIISACS 535
Score = 166 bits (419), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 177/331 (53%), Gaps = 9/331 (2%)
Query: 376 LEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEG 435
L GR VH + + N LV+ YAKC L +A +F+ + ++VVS+N++I G
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 436 YSKEEKLSEA---LDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGV 492
YS+ +S + + LF EMR + P T + SS+ S +Q H L++K
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS 149
Query: 493 FLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLE 552
F D++ ++L+ Y K +D VF M +R+ W+ M+ GY + EEAIK++
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209
Query: 553 LLLSQQR--PNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKC 610
L ++ +++ F A++++ + + G+Q H IK GL +++AL+ MY+KC
Sbjct: 210 FLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKC 269
Query: 611 GSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVL 670
SL +A + F S+ ++ W++M+ + +GE ++A+ LF M G++P+ T VGVL
Sbjct: 270 ESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVL 329
Query: 671 SACSHAGLIEDGLDHFQSMAGFGIEPGMEHY 701
+ACS +E+G + + F ++ G E +
Sbjct: 330 NACSDICYLEEG----KQLHSFLLKLGFERH 356
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 459 PGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLV 518
P T + L S +L + + +HG II+ G + + L++ Y+KC A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 519 FDEMNQRDIVVWNAMLLGYTQQ---LENEEAIKLYLELLLSQQRPNEFTFAALITAASNL 575
F+ + +D+V WN+++ GY+Q + ++L+ E+ PN +T A + A S+L
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 576 GSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMI 635
S G+Q H ++K+ D ++ ++L+ MY K G +ED + F ++ W++M+
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 636 CTNAHHG---EPMKALLLFREMIIEGLEPNYITFVGVLSA 672
A G E +K LF EG + +Y+ F VLS+
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSS 230
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 556 SQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLED 615
++ P+ T +T S +L G+ H +I+ G + L++ YAKCG L
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 616 AYETFGSTTWKDVACWNSMICTNAHHG---EPMKALLLFREMIIEGLEPNYITFVGVLSA 672
A+ F + KDV WNS+I + +G + LFREM + + PN T G+ A
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 258/790 (32%), Positives = 419/790 (53%), Gaps = 52/790 (6%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKA-NDLDGARKLFDTMSERNLVSWSSLVSMYTK 130
+Q+H + D ++N+L+ Y K + A F + +N VSW+S++S+Y++
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 131 KGYGEEALMVFIGFLKVGNGRPDDYILSSVI---CACTQLGGGGDGGNVGEQMHSFVIKS 187
G A +F ++ RP +Y S++ C+ T+ + EQ+ + KS
Sbjct: 184 AGDQRSAFRIFSS-MQYDGSRPTEYTFGSLVTTACSLTE-----PDVRLLEQIMCTIQKS 237
Query: 188 GFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLF 247
G D++VG+ L++ +AK+GS+ A+ VF+ + + AV+ ++ G V+ + + LF
Sbjct: 238 GLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 248 NQMRE-TDVVHDKY-LLSSVLSACSMLQFVG--GGKQIHAHVLRRGM-GMDVSVINVLMD 302
M DV + Y +L S S+ + VG G+++H HV+ G+ V + N L++
Sbjct: 298 MDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVN 357
Query: 303 FYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFA 362
Y+KCG + ARR+F + K+ +SW ++I G QN EA++ + M R P F
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 363 CSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMA 422
S L+SC S++ + G+Q+H S K I+ + V N+L+ +YA+ L E RK+F M
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 423 DRNVVSYNAMIEGYSKEEK-LSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSK 481
+ + VS+N++I ++ E+ L EA+ F + +TF S+L SS+ E K
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK 537
Query: 482 QIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEM-NQRDIVVWNAMLLGYTQQ 540
QIHGL +K + + +ALI Y KC +F M +RD V WN+M+ GY
Sbjct: 538 QIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHN 597
Query: 541 LENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFIT 600
+A+ L +L + QR + F +A +++A +++ +L+ G + H ++ L+ D +
Sbjct: 598 ELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 657
Query: 601 SALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEG-L 659
SAL+DMY+KCG L+ A F + ++ WNSMI A HG+ +AL LF M ++G
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717
Query: 660 EPNYITFVGVLSACSHAGLIEDGLDHFQSMA-GFGIEPGMEHYASVVSLLGRN------- 711
P+++TFVGVLSACSHAGL+E+G HF+SM+ +G+ P +EH++ + +LGR
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLE 777
Query: 712 -------------VW-------------NVELGRYAAEMAISIDPMDSGSYTLLSNTFAC 745
+W ELG+ AAEM ++P ++ +Y LL N +A
Sbjct: 778 DFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAA 837
Query: 746 NSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILH 805
W D + RKKM + KEAG SW+ + + VH FVA DKSH AD+ Y L L
Sbjct: 838 GGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRK 897
Query: 806 IKGVGYVPNT 815
++ GYVP T
Sbjct: 898 MRDAGYVPQT 907
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 186/620 (30%), Positives = 320/620 (51%), Gaps = 13/620 (2%)
Query: 75 HAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYG 134
H+++ + L D +L N L+ Y + D ARK+FD M RN VSW+ +VS Y++ G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 135 EEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVY 194
+EAL+ +K G + Y SV+ AC ++G G G Q+H + K + D
Sbjct: 84 KEALVFLRDMVKEGI-FSNQYAFVSVLRACQEIGSVGI--LFGRQIHGLMFKLSYAVDAV 140
Query: 195 VGTSLMNLYAKN-GSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRET 253
V L+++Y K GSV A F + VK +VSW +II+ Y ++G + +F+ M+
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 254 DVVHDKYLLSS-VLSACSMLQF-VGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
+Y S V +ACS+ + V +QI + + G+ D+ V + L+ ++K G +
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEM-TRSGWKPDDFA---CSSVL 367
AR++F+++E +N ++ L+ G ++ + EA KLF +M + P+ + S
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE 320
Query: 368 TSCGSVEALEQGRQVHAYSFKAN-IESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNV 426
S L++GR+VH + ++ + N LV+MYAKC S+ +AR+VF M D++
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 427 VSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGL 486
VS+N+MI G + EA++ + MR + PG T +S L +S+ + +QIHG
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 487 IIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLEN-EE 545
+K G+ L+V +AL+ Y++ + R +F M + D V WN+++ + + E
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE 500
Query: 546 AIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALID 605
A+ +L + Q+ N TF+++++A S+L + G+Q H +K + ++ +ALI
Sbjct: 501 AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIA 560
Query: 606 MYAKCGSLEDAYETFGS-TTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYI 664
Y KCG ++ + F +D WNSMI H+ KAL L M+ G +
Sbjct: 561 CYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSF 620
Query: 665 TFVGVLSACSHAGLIEDGLD 684
+ VLSA + +E G++
Sbjct: 621 MYATVLSAFASVATLERGME 640
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 223/429 (51%), Gaps = 23/429 (5%)
Query: 266 LSACSMLQFV-------GGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFD 318
++ C L FV G + H+ + + + DV + N L++ Y + G AR++FD
Sbjct: 1 MTNCVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFD 60
Query: 319 EIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSC---GSVEA 375
E+ ++N +SW ++ GY +N +EA+ +M + G + +A SVL +C GSV
Sbjct: 61 EMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGI 120
Query: 376 LEQGRQVHAYSFKANIESDNFVKNSLVDMYAKC-DSLTEARKVFDVMADRNVVSYNAMIE 434
L GRQ+H FK + D V N L+ MY KC S+ A F + +N VS+N++I
Sbjct: 121 L-FGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIIS 179
Query: 435 GYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESS--KQIHGLIIKYGV 492
YS+ A +F M+ P TF SL+ + S+ + +QI I K G+
Sbjct: 180 VYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGL 239
Query: 493 FLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLE 552
D+F GS L+ A++K S AR VF++M R+ V N +++G +Q EEA KL+++
Sbjct: 240 LTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMD 299
Query: 553 LLLSQQRPNEFTFAALITA------ASNLGSLKHGQQFHNHLIKLGL-DFDSFITSALID 605
+ S + ++ L+++ A +G LK G++ H H+I GL DF I + L++
Sbjct: 300 -MNSMIDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVN 357
Query: 606 MYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYIT 665
MYAKCGS+ DA F T KD WNSMI +G ++A+ ++ M + P T
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 666 FVGVLSACS 674
+ LS+C+
Sbjct: 418 LISSLSSCA 426
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 244/794 (30%), Positives = 414/794 (52%), Gaps = 42/794 (5%)
Query: 54 FLQRPLPDNFNNKRITCYKQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTM 113
F+ R L + N + +++HA + GL F + L+ YS + + +F +
Sbjct: 9 FISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV 65
Query: 114 SE-RNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGD 172
S +N+ W+S++ ++K G EAL F G L+ PD Y SVI AC L
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALE-FYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124
Query: 173 GGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIIT 232
G V EQ ++ GF+ D++VG +L+++Y++ G + A+ VFD + V+ VSW ++I+
Sbjct: 125 GDLVYEQ----ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 233 GYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGM 292
GY G + +L ++++++ + +V D + +SSVL A L V G+ +H L+ G+
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 293 DVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMT 352
V V N L+ Y K R ARR+FDE++V++ +S+ T+I GY++ E++++F E
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-N 299
Query: 353 RSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLT 412
+KPD SSVL +CG + L + ++ Y KA ++ V+N L+D+YAKC +
Sbjct: 300 LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359
Query: 413 EARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSS 472
AR VF+ M ++ VS+N++I GY + L EA+ LF M + +T++ L+ +S+
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Query: 473 SVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNA 532
+ L+ K +H IK G+ +D+ +ALID Y+KC D+ +F M D V WN
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNT 479
Query: 533 MLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLG 592
++ + + +++ ++ S+ P+ TF + ++L + + G++ H L++ G
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFG 539
Query: 593 LDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFR 652
+ + I +ALI+MY+KCG LE++ F + +DV W MI +GE KAL F
Sbjct: 540 YESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFA 599
Query: 653 EMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAG-FGIEPGMEHYASVVSLLGRN 711
+M G+ P+ + F+ ++ ACSH+GL+++GL F+ M + I+P +EHYA VV LL R+
Sbjct: 600 DMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRS 659
Query: 712 --------------------VW-----------NVELGRYAAEMAISIDPMDSGSYTLLS 740
+W ++E + I ++P D G L S
Sbjct: 660 QKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILAS 719
Query: 741 NTFACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILD 800
N +A W +RK + + K G SWIEV VH F + D S ++ Y L+
Sbjct: 720 NAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLE 779
Query: 801 NLILHIKGVGYVPN 814
L + GY+P+
Sbjct: 780 ILYSLMAKEGYIPD 793
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 245/732 (33%), Positives = 383/732 (52%), Gaps = 41/732 (5%)
Query: 93 LLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRP 152
++ Y + L AR LF MS ++V+W+ ++S + K+G A+ F K + +
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK-SSVKS 325
Query: 153 DDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDA 212
L SV+ A G ++G +H+ IK G ++YVG+SL+++Y+K ++ A
Sbjct: 326 TRSTLGSVLSAI----GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381
Query: 213 KFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSML 272
VF+ L K V W +I GY +G S + LF M+ + D + +S+LS C+
Sbjct: 382 AKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAAS 441
Query: 273 QFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLI 332
+ G Q H+ ++++ + ++ V N L+D Y+KCG ++ AR++F+ + ++ ++W T+I
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTII 501
Query: 333 GGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIE 392
G Y+Q+ + EA LF M G D +S L +C V L QG+QVH S K ++
Sbjct: 502 GSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLD 561
Query: 393 SDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEM 452
D +SL+DMY+KC + +ARKVF + + +VVS NA+I GYS + L EA+ LF EM
Sbjct: 562 RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEM 620
Query: 453 RVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLD-VFAGSALIDAYSKCFS 511
V P +TF +++ SL Q HG I K G + + G +L+ Y
Sbjct: 621 LTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRG 680
Query: 512 NKDARLVFDEMNQ-RDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALIT 570
+A +F E++ + IV+W M+ G++Q EEA+K Y E+ P++ TF ++
Sbjct: 681 MTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLR 740
Query: 571 AASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWK-DVA 629
S L SL+ G+ H+ + L D D ++ LIDMYAKCG ++ + + F + +V
Sbjct: 741 VCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVV 800
Query: 630 CWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSM 689
WNS+I A +G AL +F M + P+ ITF+GVL+ACSHAG + DG F+ M
Sbjct: 801 SWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Query: 690 AG-FGIEPGMEHYASVVSLLGR--------------------NVWNVEL----------- 717
G +GIE ++H A +V LLGR +W+ L
Sbjct: 861 IGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIR 920
Query: 718 GRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNN 777
G +AE I ++P +S +Y LLSN +A W A +RK M G+ K G SWI+V
Sbjct: 921 GEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQ 980
Query: 778 EVHAFVARDKSH 789
H F A DKSH
Sbjct: 981 RTHIFAAGDKSH 992
Score = 327 bits (837), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 204/648 (31%), Positives = 331/648 (51%), Gaps = 55/648 (8%)
Query: 48 RSVLAWFLQRPLPDNFNNKRI--TCYK--------QVHAQIAISGLQCDTFLANMLLRNY 97
RS ++ F + P+ F + TC + Q+H + GL+ +++ L+ Y
Sbjct: 146 RSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMY 205
Query: 98 SKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYIL 157
+K + + AR++F+ + + N V W+ L S Y K G EEA++VF G+ RPD
Sbjct: 206 AKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH-RPDHLAF 264
Query: 158 SSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFD 217
+VI N Y + G + DA+ +F
Sbjct: 265 VTVI---------------------------------------NTYIRLGKLKDARLLFG 285
Query: 218 GLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGG 277
+ V+W +I+G+ K G +++ F MR++ V + L SVLSA ++ +
Sbjct: 286 EMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDL 345
Query: 278 GKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQ 337
G +HA ++ G+ ++ V + L+ YSKC +++ A ++F+ +E KN + W +I GY
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 338 NSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFV 397
N + M+LF +M SG+ DDF +S+L++C + LE G Q H+ K + + FV
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFV 465
Query: 398 KNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRV-GF 456
N+LVDMYAKC +L +AR++F+ M DR+ V++N +I Y ++E SEA DLF M + G
Sbjct: 466 GNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI 525
Query: 457 VPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDAR 516
V G S L + V L KQ+H L +K G+ D+ GS+LID YSKC KDAR
Sbjct: 526 VSDG-ACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Query: 517 LVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLG 576
VF + + +V NA++ GY+Q EEA+ L+ E+L P+E TFA ++ A
Sbjct: 585 KVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPE 643
Query: 577 SLKHGQQFHNHLIKLGLDFD-SFITSALIDMYAKCGSLEDAYETFGS-TTWKDVACWNSM 634
SL G QFH + K G + ++ +L+ MY + +A F ++ K + W M
Sbjct: 644 SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGM 703
Query: 635 ICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDG 682
+ ++ +G +AL ++EM +G+ P+ TFV VL CS + +G
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751
Score = 303 bits (775), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 203/696 (29%), Positives = 350/696 (50%), Gaps = 44/696 (6%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
K VH++ I G+ + L N ++ Y+K + A K FD + E+++ +W+S++SMY+
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSI 138
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
G + L F+ + P+ + S V+ C + G Q+H +IK G +R
Sbjct: 139 GKPGKVLRSFVSLFE-NQIFPNKFTFSIVLSTCAR----ETNVEFGRQIHCSMIKMGLER 193
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
+ Y G +L+++YAK + DA+ VF+ ++ V WT + +GYVK+G + ++ +F +MR
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
+ D L F V+VIN Y + G++K
Sbjct: 254 DEGHRPDH------------LAF-------------------VTVINT----YIRLGKLK 278
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCG 371
AR LF E+ ++++W +I G+ + + A++ F M +S K SVL++ G
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 372 SVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNA 431
V L+ G VHA + K + S+ +V +SLV MY+KC+ + A KVF+ + ++N V +NA
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNA 398
Query: 432 MIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYG 491
MI GY+ + + ++LF +M+ TF SLL ++ LE Q H +IIK
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK 458
Query: 492 VFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYL 551
+ ++F G+AL+D Y+KC + +DAR +F+ M RD V WN ++ Y Q EA L+
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 552 ELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCG 611
+ L + A+ + A +++ L G+Q H +K GLD D S+LIDMY+KCG
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCG 578
Query: 612 SLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLS 671
++DA + F S V N++I + + +A++LF+EM+ G+ P+ ITF ++
Sbjct: 579 IIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVE 637
Query: 672 ACSHAGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLLGRNVWNVELGRYAAEMAISIDPM 731
AC + G + G E+ +SLLG + + + A + P
Sbjct: 638 ACHKPESLTLGTQFHGQITKRGFSSEGEYLG--ISLLGMYMNSRGMTEACALFSELSSPK 695
Query: 732 DSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKE 767
+T + + + N + +A + K+M DG++ +
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPD 731
Score = 240 bits (613), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 147/500 (29%), Positives = 252/500 (50%), Gaps = 36/500 (7%)
Query: 176 VGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYV 235
+G+ +HS + G D + +G ++++LYAK V A+ FD + K +W ++++ Y
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYS 136
Query: 236 KSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVS 295
G+ L F + E + +K+ S VLS C+ V G+QIH +++ G+ +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 296 VINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSG 355
L+D Y+KC R+ ARR+F+ I N + WT L GY++ EA+ +F M G
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 356 WKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEAR 415
+PD A FV ++++ Y + L +AR
Sbjct: 257 HRPDHLA---------------------------------FV--TVINTYIRLGKLKDAR 281
Query: 416 KVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVF 475
+F M+ +VV++N MI G+ K + A++ F MR V T S+L V
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 476 SLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLL 535
+L+ +H IK G+ +++ GS+L+ YSKC + A VF+ + +++ V WNAM+
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 536 GYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDF 595
GY E+ + ++L++++ S ++FTF +L++ + L+ G QFH+ +IK L
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461
Query: 596 DSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMI 655
+ F+ +AL+DMYAKCG+LEDA + F +D WN++I + +A LF+ M
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMN 521
Query: 656 IEGLEPNYITFVGVLSACSH 675
+ G+ + L AC+H
Sbjct: 522 LCGIVSDGACLASTLKACTH 541
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 243/467 (52%), Gaps = 11/467 (2%)
Query: 73 QVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKG 132
Q H+ I L + F+ N L+ Y+K L+ AR++F+ M +R+ V+W++++ Y +
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDE 508
Query: 133 YGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRD 192
EA +F + + D L+S + ACT + G G+Q+H +K G DRD
Sbjct: 509 NESEAFDLF-KRMNLCGIVSDGACLASTLKACTHV----HGLYQGKQVHCLSVKCGLDRD 563
Query: 193 VYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRE 252
++ G+SL+++Y+K G + DA+ VF L + VS +I GY ++ + ++ LF +M
Sbjct: 564 LHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEE-AVVLFQEMLT 622
Query: 253 TDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINV-LMDFYSKCGRVK 311
V + ++++ AC + + G Q H + +RG + + + L+ Y +
Sbjct: 623 RGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMT 682
Query: 312 MARRLFDEIE-VKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSC 370
A LF E+ K+I+ WT ++ G+ QN F EA+K + EM G PD +VL C
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC 742
Query: 371 GSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADR-NVVSY 429
+ +L +GR +H+ F + D N+L+DMYAKC + + +VFD M R NVVS+
Sbjct: 743 SVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSW 802
Query: 430 NAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLII- 488
N++I GY+K +AL +F MR + P +TF+ +L S + ++I ++I
Sbjct: 803 NSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIG 862
Query: 489 KYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQR-DIVVWNAML 534
+YG+ V + ++D + ++A + N + D +W+++L
Sbjct: 863 QYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLL 909
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 148/336 (44%), Gaps = 36/336 (10%)
Query: 375 ALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIE 434
AL G+ VH+ S I+S+ + N++VD+YAKC ++ A K FD + +++V ++N+M+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 435 GYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFL 494
YS K + L F + + P TF +L + ++E +QIH +IK G+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 495 DVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELL 554
+ + G AL+D Y+KC DAR VF+ + + V W + GY + EEA+ ++ +
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 555 LSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLE 614
RP+ F + I+ Y + G L+
Sbjct: 254 DEGHRPDHLAFVTV-----------------------------------INTYIRLGKLK 278
Query: 615 DAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACS 674
DA FG + DV WN MI + G A+ F M ++ T VLSA
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 675 HAGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLLGR 710
++ GL G+ + +S+VS+ +
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 115/216 (53%), Gaps = 1/216 (0%)
Query: 475 FSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAML 534
+L K +H + G+ + G+A++D Y+KC A FD + ++D+ WN+ML
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSML 132
Query: 535 LGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLD 594
Y+ + + ++ ++ L +Q PN+FTF+ +++ + +++ G+Q H +IK+GL+
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 595 FDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREM 654
+S+ AL+DMYAKC + DA F + CW + G P +A+L+F M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 655 IIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMA 690
EG P+++ FV V++ G ++D F M+
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS 288
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 6/162 (3%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSER-NLVSWSSLVSMYTK 130
+ +H+ I D +N L+ Y+K D+ G+ ++FD M R N+VSW+SL++ Y K
Sbjct: 752 RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811
Query: 131 KGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFD 190
GY E+AL +F ++ + PD+ V+ AC+ G DG + E M + + G +
Sbjct: 812 NGYAEDALKIFDS-MRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM---IGQYGIE 867
Query: 191 RDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKT-AVSWTTII 231
V +++L + G + +A + +K A W++++
Sbjct: 868 ARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLL 909
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 243/767 (31%), Positives = 389/767 (50%), Gaps = 71/767 (9%)
Query: 82 GLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVF 141
GL D F+A L+ Y K + + LF+ M R++V W+ ++ Y + G+ EEA+ +
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 142 IGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMN 201
F G P++ L + GD + G Q+ SF +G D
Sbjct: 235 SAFHSSGLN-PNEITLRLLARI------SGDDSDAG-QVKSFA--NGND----------- 273
Query: 202 LYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYL 261
SV + F GL + Y+ SG+ L F M E+DV D+
Sbjct: 274 ----ASSVSEIIFRNKGL------------SEYLHSGQYSALLKCFADMVESDVECDQVT 317
Query: 262 LSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIE 321
+L+ + + G+Q+H L+ G+ + ++V N L++ Y K + AR +FD +
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377
Query: 322 VKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSV-EALEQGR 380
+++ISW ++I G QN + EA+ LF ++ R G KPD + +SVL + S+ E L +
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSK 437
Query: 381 QVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEE 440
QVH ++ K N SD+FV +L+D Y++ + EA +F+ + ++V++NAM+ GY++
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSH 496
Query: 441 KLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGS 500
+ L LF M T ++ +F++ KQ+H IK G LD++ S
Sbjct: 497 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 556
Query: 501 ALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRP 560
++D Y KC A+ FD + D V W M+ G + E E A ++ ++ L P
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP 616
Query: 561 NEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETF 620
+EFT A L A+S L +L+ G+Q H + +KL D F+ ++L+DMYAKCGS++DAY F
Sbjct: 617 DEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF 676
Query: 621 GSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIE 680
++ WN+M+ A HGE + L LF++M G++P+ +TF+GVLSACSH+GL+
Sbjct: 677 KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS 736
Query: 681 DGLDHFQSMAG-FGIEPGMEHYASVVSLLGRN---------------------------- 711
+ H +SM G +GI+P +EHY+ + LGR
Sbjct: 737 EAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAA 796
Query: 712 ---VWNVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEA 768
+ E G+ A + ++P+DS +Y LLSN +A S W + K R M + K+
Sbjct: 797 CRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDP 856
Query: 769 GRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIKGVGYVPNT 815
G SWIEV N++H FV D+S+ +L Y + ++I IK GYVP T
Sbjct: 857 GFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPET 903
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 262/485 (54%), Gaps = 7/485 (1%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
+QVH GL ++N L+ Y K AR +FD MSER+L+SW+S+++ +
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
G EA+ +F+ L+ G +PD Y ++SV+ A + L +G ++ +Q+H IK
Sbjct: 395 GLEVEAVCLFMQLLRCGL-KPDQYTMTSVLKAASSLP---EGLSLSKQVHVHAIKINNVS 450
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
D +V T+L++ Y++N + +A+ +F+ V+W ++ GY +S +L LF M
Sbjct: 451 DSFVSTALIDAYSRNRCMKEAEILFERHNFDL-VAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
+ D + L++V C L + GKQ+HA+ ++ G +D+ V + ++D Y KCG +
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 569
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCG 371
A+ FD I V + ++WTT+I G ++N + A +F++M G PD+F +++ +
Sbjct: 570 AAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629
Query: 372 SVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNA 431
+ ALEQGRQ+HA + K N +D FV SLVDMYAKC S+ +A +F + N+ ++NA
Sbjct: 630 CLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNA 689
Query: 432 MIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLL-GLSSSVFSLESSKQIHGLIIKY 490
M+ G ++ + E L LF +M+ + P +TF+ +L S S E+ K + + Y
Sbjct: 690 MLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDY 749
Query: 491 GVFLDVFAGSALIDAYSKCFSNKDARLVFDEMN-QRDIVVWNAMLLGYTQQLENEEAIKL 549
G+ ++ S L DA + K A + + M+ + ++ +L Q + E ++
Sbjct: 750 GIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRV 809
Query: 550 YLELL 554
+LL
Sbjct: 810 ATKLL 814
Score = 242 bits (617), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 291/617 (47%), Gaps = 44/617 (7%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
K HA+I + FL N L+ YSK L AR++FD M +R+LVSW+S+++ Y +
Sbjct: 59 KCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQS 118
Query: 132 GYG-----EEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIK 186
++A ++F L+ LS ++ C G E H + K
Sbjct: 119 SECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVW----ASESFHGYACK 173
Query: 187 SGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNL 246
G D D +V +L+N+Y K G V + K +F+ + + V W ++ Y++ G + +++L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 247 FNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSK 306
+ + + +I +L R G D S
Sbjct: 234 SSAFHSSGL---------------------NPNEITLRLLARISGDD-----------SD 261
Query: 307 CGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSV 366
G+VK D V II + Y+ + +K F +M S + D +
Sbjct: 262 AGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILM 321
Query: 367 LTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNV 426
L + V++L G+QVH + K ++ V NSL++MY K AR VFD M++R++
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDL 381
Query: 427 VSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFS-LESSKQIHG 485
+S+N++I G ++ EA+ LF ++ + P T S+L +SS+ L SKQ+H
Sbjct: 382 ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHV 441
Query: 486 LIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEE 545
IK D F +ALIDAYS+ K+A ++F+ N D+V WNAM+ GYTQ + +
Sbjct: 442 HAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHK 500
Query: 546 AIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALID 605
+KL+ + +R ++FT A + L ++ G+Q H + IK G D D +++S ++D
Sbjct: 501 TLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILD 560
Query: 606 MYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYIT 665
MY KCG + A F S D W +MI +GE +A +F +M + G+ P+ T
Sbjct: 561 MYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Query: 666 FVGVLSACSHAGLIEDG 682
+ A S +E G
Sbjct: 621 IATLAKASSCLTALEQG 637
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 185/402 (46%), Gaps = 37/402 (9%)
Query: 278 GKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQ 337
GK HA +L + +IN L+ YSKCG + ARR+FD++ ++++SW +++ Y Q
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 338 NSF-----DREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIE 392
+S ++A LF + + S +L C + H Y+ K ++
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 393 SDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEM 452
D FV +LV++Y K + E + +F+ M R+VV +N M++ Y + EA+DL
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 453 RVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSN 512
+ P +T L +S D AG K F+N
Sbjct: 238 HSSGLNPNEITLRLLARISGD---------------------DSDAGQV------KSFAN 270
Query: 513 KDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAA 572
+ D + +I+ N L Y + +K + +++ S ++ TF ++ A
Sbjct: 271 GN-----DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATA 325
Query: 573 SNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWN 632
+ SL GQQ H +KLGLD ++++LI+MY K A F + + +D+ WN
Sbjct: 326 VKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWN 385
Query: 633 SMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACS 674
S+I A +G ++A+ LF +++ GL+P+ T VL A S
Sbjct: 386 SVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/781 (30%), Positives = 413/781 (52%), Gaps = 44/781 (5%)
Query: 72 KQVHAQI--AISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYT 129
+Q+H++I + D FLA L+ Y K LD A K+FD M +R +W++++ Y
Sbjct: 100 RQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158
Query: 130 KKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGF 189
G AL ++ ++V +++ AC +L G ++HS ++K G+
Sbjct: 159 SNGEPASALALYWN-MRVEGVPLGLSSFPALLKACAKL----RDIRSGSELHSLLVKLGY 213
Query: 190 DRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVK-TAVSWTTIITGYVKSGRSDLSLNLFN 248
++ +L+++YAKN + A+ +FDG K AV W +I++ Y SG+S +L LF
Sbjct: 214 HSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFR 273
Query: 249 QMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGM-GMDVSVINVLMDFYSKC 307
+M T + Y + S L+AC + GK+IHA VL+ ++ V N L+ Y++C
Sbjct: 274 EMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC 333
Query: 308 GRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVL 367
G++ A R+ ++ ++++W +LI GY+QN +EA++ F++M +G K D+ + +S++
Sbjct: 334 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 393
Query: 368 TSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVV 427
+ G + L G ++HAY K +S+ V N+L+DMY+KC+ + F M D++++
Sbjct: 394 AASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI 453
Query: 428 SYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLI 487
S+ +I GY++ + EAL+LF ++ + + S+L SS + S+ K+IH I
Sbjct: 454 SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHI 513
Query: 488 IKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAI 547
++ G+ LD + L+D Y KC + A VF+ + +D+V W +M+ EA+
Sbjct: 514 LRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAV 572
Query: 548 KLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMY 607
+L+ ++ + + +++AA++L +L G++ H +L++ G + I A++DMY
Sbjct: 573 ELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMY 632
Query: 608 AKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFV 667
A CG L+ A F K + + SMI HG A+ LF +M E + P++I+F+
Sbjct: 633 ACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFL 692
Query: 668 GVLSACSHAGLIEDGLDHFQSMA-GFGIEPGMEHYASVVSLLGR---------------- 710
+L ACSHAGL+++G + M + +EP EHY +V +LGR
Sbjct: 693 ALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKT 752
Query: 711 ----NVW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQV 755
VW E+G AA+ + ++P + G+ L+SN FA W D ++V
Sbjct: 753 EPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKV 812
Query: 756 RKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHI-KGVGYVPN 814
R KM G+ K G SWIE++ +VH F ARDKSH + Y L + + + VGYV +
Sbjct: 813 RAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVAD 872
Query: 815 T 815
T
Sbjct: 873 T 873
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 211/413 (51%), Gaps = 3/413 (0%)
Query: 265 VLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVI-NVLMDFYSKCGRVKMARRLFDEIEVK 323
VL C + V G+Q+H+ + + ++ + L+ Y KCG + A ++FDE+ +
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 324 NIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVH 383
+W T+IG Y+ N A+ L+ M G + ++L +C + + G ++H
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 384 AYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADR-NVVSYNAMIEGYSKEEKL 442
+ K S F+ N+LV MYAK D L+ AR++FD ++ + V +N+++ YS K
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 443 SEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVF-LDVFAGSA 501
E L+LF EM + P T VS L + K+IH ++K +++ +A
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 502 LIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPN 561
LI Y++C A + +MN D+V WN+++ GY Q L +EA++ + +++ + + +
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 562 EFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFG 621
E + ++I A+ L +L G + H ++IK G D + + + LIDMY+KC F
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 445
Query: 622 STTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACS 674
KD+ W ++I A + ++AL LFR++ + +E + + +L A S
Sbjct: 446 RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 202/409 (49%), Gaps = 14/409 (3%)
Query: 366 VLTSCGSVEALEQGRQVHAYSFK--ANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMAD 423
VL CG A+ QGRQ+H+ FK + E D F+ LV MY KC SL +A KVFD M D
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 424 RNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQI 483
R ++N MI Y + + AL L+ MRV VP GL +F +LL + + + S ++
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 484 HGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQR-DIVVWNAMLLGYTQQLE 542
H L++K G F +AL+ Y+K AR +FD ++ D V+WN++L Y+ +
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 543 NEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGL-DFDSFITS 601
+ E ++L+ E+ ++ PN +T + +TA K G++ H ++K + ++ +
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 324
Query: 602 ALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEP 661
ALI MY +CG + A DV WNS+I + +AL F +MI G +
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 384
Query: 662 NYITFVGVLSACSHAGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLLGRNVWNVELGRYA 721
+ ++ +++A + G++ + G + ++ +++ + + +GR
Sbjct: 385 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 444
Query: 722 AEMAISIDPMDSGSYTLLSNTFACNSMWADAKQV-----RKKMDLDGLM 765
M D S+T + +A N +A ++ +K+M++D ++
Sbjct: 445 LRM----HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 489
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/763 (31%), Positives = 399/763 (52%), Gaps = 39/763 (5%)
Query: 73 QVHAQIAISG-LQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
Q+HA + ++G L+ D L+ +Y+ D +R +F+ + + L+
Sbjct: 19 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWC 78
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
+ A+ ++ + + ++ SV+ AC G + +VG ++H +IK G D
Sbjct: 79 HLLDAAIDLYHRLVS-ETTQISKFVFPSVLRAC---AGSREHLSVGGKVHGRIIKGGVDD 134
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
D + TSL+ +Y + G++ DA+ VFDG+ V+ V+W+T+++ +++G +L +F M
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
+ V D + SV+ C+ L + + +H + R+ +D ++ N L+ YSKCG +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCG 371
+ R+F++I KN +SWT +I Y + F +A++ F+EM +SG +P+ SVL+SCG
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCG 314
Query: 372 SVEALEQGRQVHAYSFKANIESD-NFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYN 430
+ + +G+ VH ++ + ++ + + +LV++YA+C L++ V V++DRN+V++N
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWN 374
Query: 431 AMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKY 490
++I Y+ + +AL LF +M + P T S + + + KQIHG +I+
Sbjct: 375 SLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT 434
Query: 491 GVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLY 550
V D F ++LID YSK S A VF+++ R +V WN+ML G++Q + EAI L+
Sbjct: 435 DVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLF 493
Query: 551 LELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKC 610
+ S NE TF A+I A S++GSL+ G+ H+ LI GL D F +ALIDMYAKC
Sbjct: 494 DYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKC 552
Query: 611 GSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVL 670
G L A F + + + + W+SMI HG A+ F +M+ G +PN + F+ VL
Sbjct: 553 GDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVL 612
Query: 671 SACSHAGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLLGRNVWNVELGRYAAEMAISIDP 730
SAC H+G +E+G +F M FG+ P EH+A + LL R+ E R EM D
Sbjct: 613 SACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADA 672
Query: 731 M-------------------------------DSGSYTLLSNTFACNSMWADAKQVRKKM 759
D+G YTLLSN +A W + +++R M
Sbjct: 673 SVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAM 732
Query: 760 DLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNL 802
L K G S IE++ +V F A +++ D Y L NL
Sbjct: 733 KSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 252/481 (52%), Gaps = 11/481 (2%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
+ VH QI D L N LL YSK DL + ++F+ ++++N VSW++++S Y +
Sbjct: 222 RSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
+ E+AL F +K G P+ L SV+ +C +G +G +V H F ++ D
Sbjct: 282 EFSEKALRSFSEMIKSGI-EPNLVTLYSVLSSCGLIGLIREGKSV----HGFAVRRELDP 336
Query: 192 DV-YVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQM 250
+ + +L+ LYA+ G + D + V + + V+W ++I+ Y G +L LF QM
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 251 RETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRV 310
+ D + L+S +SAC V GKQIH HV+R + D V N L+D YSK G V
Sbjct: 397 VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSV 455
Query: 311 KMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSC 370
A +F++I+ +++++W +++ G+ QN EA+ LF M S + ++ +V+ +C
Sbjct: 456 DSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 371 GSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYN 430
S+ +LE+G+ VH + ++ D F +L+DMYAKC L A VF M+ R++VS++
Sbjct: 516 SSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS 574
Query: 431 AMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKY 490
+MI Y ++ A+ F++M P + F+++L S+E K L+ +
Sbjct: 575 SMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSF 634
Query: 491 GVFLDVFAGSALIDAYSKCFSNKDARLVFDEMN-QRDIVVWNAMLLG--YTQQLENEEAI 547
GV + + ID S+ K+A EM D VW +++ G Q+++ +AI
Sbjct: 635 GVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAI 694
Query: 548 K 548
K
Sbjct: 695 K 695
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/682 (33%), Positives = 360/682 (52%), Gaps = 46/682 (6%)
Query: 159 SVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDG 218
S+ICAC+ G ++H ++ S D + ++++Y K GS+ DA+ VFD
Sbjct: 72 SLICACSSSRSLAQG----RKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 219 LMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGG 278
+ + VS+T++ITGY ++G+ ++ L+ +M + D+V D++ S++ AC+ VG G
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 279 KQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQN 338
KQ+HA V++ + N L+ Y + ++ A R+F I +K++ISW+++I G+ Q
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 339 SFDREAMKLFTEMTRSG-WKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFV 397
F+ EA+ EM G + P+++ S L +C S+ + G Q+H K+ + +
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 398 KNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRV-GF 456
SL DMYA+C L AR+VFD + + S+N +I G + EA+ +F +MR GF
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGF 367
Query: 457 VPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDAR 516
+P + + SLL + +L QIH IIK+G D+ ++L+ Y+ C D
Sbjct: 368 IPDAI-SLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFC---SDLY 423
Query: 517 LVF----DEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAA 572
F D N D V WN +L Q + E ++L+ +L+S+ P+ T L+
Sbjct: 424 CCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 573 SNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWN 632
+ SLK G Q H + +K GL + FI + LIDMYAKCGSL A F S +DV W+
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWS 543
Query: 633 SMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSM-AG 691
++I A G +AL+LF+EM G+EPN++TFVGVL+ACSH GL+E+GL + +M
Sbjct: 544 TLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTE 603
Query: 692 FGIEPGMEHYASVVSLLGRN--------------------VW-----------NVELGRY 720
GI P EH + VV LL R VW NV L +
Sbjct: 604 HGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQK 663
Query: 721 AAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVH 780
AAE + IDP +S ++ LL + A + W +A +R M + K G+SWIE+ +++H
Sbjct: 664 AAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIH 723
Query: 781 AFVARDKSHHAADLTYSILDNL 802
F A D H D Y++L N+
Sbjct: 724 IFFAEDIFHPERDDIYTVLHNI 745
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 114/215 (53%), Gaps = 1/215 (0%)
Query: 461 LLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFD 520
L T++SL+ SS SL ++IH I+ D + ++ Y KC S +DAR VFD
Sbjct: 67 LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 126
Query: 521 EMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKH 580
M +R++V + +++ GY+Q + EAI+LYL++L P++F F ++I A ++ +
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 581 GQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAH 640
G+Q H +IKL +ALI MY + + DA F KD+ W+S+I +
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 641 HGEPMKALLLFREMIIEGL-EPNYITFVGVLSACS 674
G +AL +EM+ G+ PN F L ACS
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 11/219 (5%)
Query: 73 QVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKG 132
QVH +GL + F+ N L+ Y+K L AR++FD+M R++VSWS+L+ Y + G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 133 YGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRD 192
+GEEAL++F +K P+ V+ AC+ +G +G + M + + G
Sbjct: 554 FGEEALILF-KEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQT---EHGISPT 609
Query: 193 VYVGTSLMNLYAKNGSVDDAKFVFDGLMVKT-AVSWTTIITGYVKSGRSDLSLNLFNQMR 251
+ +++L A+ G +++A+ D + ++ V W T+++ G +++L +
Sbjct: 610 KEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQG----NVHLAQKAA 665
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGM 290
E + D + ++ + CSM G +A +LR M
Sbjct: 666 ENILKIDPFNSTAHVLLCSM--HASSGNWENAALLRSSM 702
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 254/853 (29%), Positives = 427/853 (50%), Gaps = 60/853 (7%)
Query: 9 HSLRKPHHKIKN-CNSSNLLKSVTFSPRNPSLQSFNISTKRSVLAWFLQRP-----LPDN 62
H LR+ I N C + +L KS ++Q F + S A+ L R L +
Sbjct: 45 HFLRR----ISNFCETGDLDKSFR------TVQEFVGDDESSSDAFLLVREALGLLLQAS 94
Query: 63 FNNKRITCYKQVHAQIAISG-LQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSW 121
K I +++H ++ S L+ D L ++ Y+ D +R +FD + +NL W
Sbjct: 95 GKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQW 154
Query: 122 SSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMH 181
++++S Y++ +E L FI + + PD + VI AC + G +G +H
Sbjct: 155 NAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG----IGLAVH 210
Query: 182 SFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSD 241
V+K+G DV+VG +L++ Y +G V DA +FD + + VSW ++I + +G S+
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 270
Query: 242 LSLNLFNQMRETD----VVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVI 297
S L +M E + + D L +VL C+ + +G GK +H ++ + ++ +
Sbjct: 271 ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLN 330
Query: 298 NVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGW- 356
N LMD YSKCG + A+ +F KN++SW T++GG+ + +M G
Sbjct: 331 NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 390
Query: 357 -KPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEAR 415
K D+ + + C L +++H YS K + V N+ V YAKC SL+ A+
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 416 KVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVF 475
+VF + + V S+NA+I G+++ +LD +M++ + P T SLL S +
Sbjct: 451 RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLK 510
Query: 476 SLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLL 535
SL K++HG II+ + D+F +++ Y C + +FD M + +V WN ++
Sbjct: 511 SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVIT 570
Query: 536 GYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDF 595
GY Q + A+ ++ +++L + + + A S L SL+ G++ H + +K L+
Sbjct: 571 GYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLED 630
Query: 596 DSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMI 655
D+FI +LIDMYAK GS+ + + F K A WN+MI HG +A+ LF EM
Sbjct: 631 DAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQ 690
Query: 656 IEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSM-AGFGIEPGMEHYASVVSLLGR---- 710
G P+ +TF+GVL+AC+H+GLI +GL + M + FG++P ++HYA V+ +LGR
Sbjct: 691 RTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQL 750
Query: 711 -----------------NVW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNT 742
+W N+E+G A ++P +Y LLSN
Sbjct: 751 DKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNL 810
Query: 743 FACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNL 802
+A W D ++VR++M+ L K+AG SWIE+N +V +FV ++ + S+ L
Sbjct: 811 YAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSIL 870
Query: 803 ILHIKGVGYVPNT 815
+ I +GY P+T
Sbjct: 871 EMKISKMGYRPDT 883
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 246/788 (31%), Positives = 395/788 (50%), Gaps = 125/788 (15%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMS----------------- 114
K +H I G++ DT+L N LL Y + D D ARK+FD MS
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85
Query: 115 --------------ERNLVSWSSLVSMYTKKGYGEEALMVFI-----GFLKVGNGRPDDY 155
ER++VSW++++S+ +KG+ E+AL+V+ GFL P +
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL------PSRF 139
Query: 156 ILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNG-SVDDAKF 214
L+SV+ AC+++ G G + H +K+G D++++VG +L+++YAK G VD
Sbjct: 140 TLASVLSACSKV----LDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 215 VFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLS------A 268
VF+ L VS+T +I G + + ++ +F M E V D LS++LS
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 269 CSMLQFVGG---GKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNI 325
C L + G GKQIH LR G G D+ + N L++ Y+K + A +F E+ N+
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 326 ISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAY 385
+SW +I G+ Q ++++ T M SG++P++ C SVL +C +E G
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG------ 369
Query: 386 SFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEA 445
R++F + +V ++NAM+ GYS E EA
Sbjct: 370 -----------------------------RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA 400
Query: 446 LDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDA 505
+ F +M+ + P T +L + + LE KQIHG++I+ + + S LI
Sbjct: 401 ISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAV 460
Query: 506 YSKCFSNKDARLVFDE-MNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQR-PNEF 563
YS+C + + +FD+ +N+ DI WN+M+ G+ + + +A+ L+ + + PNE
Sbjct: 461 YSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
Query: 564 TFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGST 623
+FA ++++ S L SL HG+QFH ++K G DSF+ +AL DMY KCG ++ A + F +
Sbjct: 521 SFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV 580
Query: 624 TWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGL 683
K+ WN MI H+G +A+ L+R+MI G +P+ ITFV VL+ACSH+GL+E GL
Sbjct: 581 LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGL 640
Query: 684 DHFQSMAGF-GIEPGMEHYASVVSLLGRN--------------------VW--------- 713
+ SM GIEP ++HY +V LGR +W
Sbjct: 641 EILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRV 700
Query: 714 --NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAGRS 771
+V L R AE + +DP S +Y LLSNT++ W D+ ++ M+ + + K G+S
Sbjct: 701 HGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Query: 772 WIEVNNEV 779
W N++
Sbjct: 761 WTTYGNDL 768
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 254/545 (46%), Gaps = 84/545 (15%)
Query: 177 GEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVK 236
G+ +H F+++ G D Y+ L++LY + G D A+ VFD + V+ SW +T K
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 237 SGRSDLSLNLFNQMRETDVVH-------------------------------DKYLLSSV 265
G + +F+ M E DVV ++ L+SV
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 266 LSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCG-RVKMARRLFDEIEVKN 324
LSACS + G + H ++ G+ ++ V N L+ Y+KCG V R+F+ + N
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 325 IISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLT------SCGSVEAL-- 376
+S+T +IGG + + EA+++F M G + D S++L+ C S+ +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 377 -EQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEG 435
E G+Q+H + + D + NSL+++YAK + A +F M + NVVS+N MI G
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 436 YSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLD 495
+ +E + ++++ MR P +T +S+LG
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG-------------------------- 358
Query: 496 VFAGSALIDAYSKCFSNKD---ARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLE 552
CF + D R +F + Q + WNAML GY+ EEAI + +
Sbjct: 359 ------------ACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 553 LLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGS 612
+ +P++ T + ++++ + L L+ G+Q H +I+ + +S I S LI +Y++C
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 466
Query: 613 LEDAYETFGSTTWK-DVACWNSMICTNAHHGEPMKALLLFREMIIEG-LEPNYITFVGVL 670
+E + F + D+ACWNSMI H+ KAL+LFR M L PN +F VL
Sbjct: 467 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 526
Query: 671 SACSH 675
S+CS
Sbjct: 527 SSCSR 531
Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 166/374 (44%), Gaps = 55/374 (14%)
Query: 379 GRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSK 438
G+ +H + + ++SD ++ N L+D+Y +C ARKVFD M+ R+V S+NA + K
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 439 EEKLSEALDLFHEM----------------RVGFVP---------------PGLLTFVSL 467
L EA ++F M R GF P T S+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 468 LGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKC-FSNKDARLVFDEMNQRD 526
L S V + HG+ +K G+ ++F G+AL+ Y+KC F VF+ ++Q +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 527 IVVWNAMLLGYTQQLENEEAIKLY--------------LELLLSQQRPNEFTFAALITAA 572
V + A++ G ++ + EA++++ L +LS P E +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGC-----DSL 259
Query: 573 SNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWN 632
S + + G+Q H ++LG D + ++L+++YAK + A F +V WN
Sbjct: 260 SEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWN 319
Query: 633 SMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAGF 692
MI K++ M G +PN +T + VL AC +G +E G F S+
Sbjct: 320 IMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP-- 377
Query: 693 GIEPGMEHYASVVS 706
+P + + +++S
Sbjct: 378 --QPSVSAWNAMLS 389
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 32/225 (14%)
Query: 479 SSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAML---- 534
S K IHG I++ G+ D + + L+D Y +C AR VFDEM+ RD+ WNA L
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 535 ----LGYTQQLEN-----------------------EEAIKLYLELLLSQQRPNEFTFAA 567
LG ++ + E+A+ +Y ++ P+ FT A+
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 568 LITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLED-AYETFGSTTWK 626
+++A S + G + H +K GLD + F+ +AL+ MYAKCG + D F S +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 627 DVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLS 671
+ + ++I A + ++A+ +FR M +G++ + + +LS
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 245/775 (31%), Positives = 400/775 (51%), Gaps = 49/775 (6%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSE-------RNLVSWSSL 124
K +H + + G + D F+A L+ Y K LD A ++FD S+ R++ W+S+
Sbjct: 80 KTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSM 139
Query: 125 VSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICA-CTQLGGGGDGGNVGEQMHSF 183
+ Y K +E + F L G RPD + LS V+ C + G G+Q+H F
Sbjct: 140 IDGYFKFRRFKEGVGCFRRMLVFGV-RPDAFSLSIVVSVMCKE---GNFRREEGKQIHGF 195
Query: 184 VIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKT-AVSWTTIITGYVKSGRSDL 242
++++ D D ++ T+L+++Y K G DA VF + K+ V W +I G+ SG +
Sbjct: 196 MLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICES 255
Query: 243 SLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMD 302
SL+L+ + V + L ACS + G G+QIH V++ G+ D V L+
Sbjct: 256 SLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLS 315
Query: 303 FYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFA 362
YSKCG V A +F + K + W ++ Y +N + A+ LF M + PD F
Sbjct: 316 MYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFT 375
Query: 363 CSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMA 422
S+V++ C + G+ VHA FK I+S + ++++L+ +Y+KC +A VF M
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME 435
Query: 423 DRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVG--FVPPGLLTFVSLLGLSSSVFSLESS 480
++++V++ ++I G K K EAL +F +M+ + P S+ + + +L
Sbjct: 436 EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 481 KQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQ 540
Q+HG +IK G+ L+VF GS+LID YSKC + A VF M+ ++V WN+M+ Y++
Sbjct: 496 LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN 555
Query: 541 LENEEAIKLYLELLLSQQ-RPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFI 599
E +I L+ L+LSQ P+ + +++ A S+ SL G+ H + ++LG+ D+ +
Sbjct: 556 NLPELSIDLF-NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHL 614
Query: 600 TSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGL 659
+ALIDMY KCG + A F K + WN MI HG+ + AL LF EM G
Sbjct: 615 KNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE 674
Query: 660 EPNYITFVGVLSACSHAGLIEDGLDHFQSMA-GFGIEPGMEHYASVVSLLGR-------- 710
P+ +TF+ ++SAC+H+G +E+G + F+ M +GIEP MEHYA++V LLGR
Sbjct: 675 SPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAY 734
Query: 711 ------------NVW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNS 747
++W NVELG +AE + ++P +Y L N +
Sbjct: 735 SFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAG 794
Query: 748 MWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNL 802
+ +A ++ M GL K+ G SWIEV++ + F + S +++L+ L
Sbjct: 795 LKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/556 (29%), Positives = 277/556 (49%), Gaps = 20/556 (3%)
Query: 155 YILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKF 214
+ S++ AC+ L + G+ +H V+ G+ D ++ TSL+N+Y K G +D A
Sbjct: 61 FTFPSLLKACSAL----TNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQ 116
Query: 215 VFD-------GLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLS 267
VFD G+ + W ++I GY K R + F +M V D + LS V+S
Sbjct: 117 VFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVS 176
Query: 268 A-CSMLQF-VGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVK-N 324
C F GKQIH +LR + D + L+D Y K G A R+F EIE K N
Sbjct: 177 VMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSN 236
Query: 325 IISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHA 384
++ W +I G+ + ++ L+ + K + + L +C E GRQ+H
Sbjct: 237 VVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHC 296
Query: 385 YSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSE 444
K + +D +V SL+ MY+KC + EA VF + D+ + +NAM+ Y++ +
Sbjct: 297 DVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYS 356
Query: 445 ALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALID 504
ALDLF MR V P T +++ S + K +H + K + SAL+
Sbjct: 357 ALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLT 416
Query: 505 AYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQ--RPNE 562
YSKC + DA LVF M ++D+V W +++ G + + +EA+K++ ++ +P+
Sbjct: 417 LYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 476
Query: 563 FTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGS 622
++ A + L +L+ G Q H +IK GL + F+ S+LID+Y+KCG E A + F S
Sbjct: 477 DIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 623 TTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDG 682
+ +++ WNSMI + + P ++ LF M+ +G+ P+ ++ VL A S + G
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 683 LDHFQSMAGFGIEPGM 698
+S+ G+ + G+
Sbjct: 597 ----KSLHGYTLRLGI 608
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 134/276 (48%), Gaps = 15/276 (5%)
Query: 415 RKVFDVMADRNV--VSYNAMIEGYSKEEKLSEALDLFHEMRVGFVP--PGLLTFVSLLGL 470
R+ +AD + S N+ I ++ + +AL L+ + G P + TF SLL
Sbjct: 11 RRGLCCVADSYISPASINSGIRALIQKGEYLQALHLYSK-HDGSSPFWTSVFTFPSLLKA 69
Query: 471 SSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQ------ 524
S++ +L K IHG ++ G D F ++L++ Y KC A VFD +Q
Sbjct: 70 CSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVS 129
Query: 525 -RDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLK--HG 581
RD+ VWN+M+ GY + +E + + +L+ RP+ F+ + +++ G+ + G
Sbjct: 130 ARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEG 189
Query: 582 QQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWK-DVACWNSMICTNAH 640
+Q H +++ LD DSF+ +ALIDMY K G DA+ F K +V WN MI
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 641 HGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHA 676
G +L L+ ++ +F G L ACS +
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQS 285
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 251/774 (32%), Positives = 404/774 (52%), Gaps = 63/774 (8%)
Query: 83 LQCDTFLANMLLRNYSKANDLDGARKLFDTMSERN-LVSWSSLVSMYTKKGYGEEALMVF 141
L C+ + + R YS A KLFD S+RN S + +S ++ AL +F
Sbjct: 7 LHCNRSKSFLFQRFYSPYRI---AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIF 63
Query: 142 IGFLKVGN-GRP-DDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSL 199
L++G GR D+ L + AC GD G Q+H F SGF V V ++
Sbjct: 64 KENLQLGYFGRHMDEVTLCLALKACR-----GDLKR-GCQIHGFSTTSGFTSFVCVSNAV 117
Query: 200 MNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDK 259
M +Y K G D+A +F+ L+ VSW TI++G+ + ++LN +M+ VV D
Sbjct: 118 MGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDA 174
Query: 260 YLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDE 319
+ S+ LS C + G Q+ + V++ G+ D+ V N + YS+ G + ARR+FDE
Sbjct: 175 FTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDE 234
Query: 320 IEVKNIISWTTLIGGYMQN-SFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQ 378
+ K++ISW +L+ G Q +F EA+ +F +M R G + D + +SV+T+C L+
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKL 294
Query: 379 GRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSK 438
RQ+H K ES V N L+ Y+KC L + VF M++RNVVS+ MI
Sbjct: 295 ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK- 353
Query: 439 EEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFA 498
+A+ +F MR V P +TFV L+ ++ +IHGL IK G +
Sbjct: 354 ----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 499 GSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQ 558
G++ I Y+K + +DA+ F+++ R+I+ WNAM+ G+ Q + EA+K++L ++
Sbjct: 410 GNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA-AET 468
Query: 559 RPNEFTFAALITA---ASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLED 615
PNE+TF +++ A A ++ S+K GQ+ H HL+KLGL+ ++SAL+DMYAK G++++
Sbjct: 469 MPNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 527
Query: 616 AYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSH 675
+ + F + K+ W S+I + HG+ + LF +MI E + P+ +TF+ VL+AC+
Sbjct: 528 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNR 587
Query: 676 AGLIEDGLDHFQSMAG-FGIEPGMEHYASVVSLLGRNV---------------------- 712
G+++ G + F M + +EP EHY+ +V +LGR
Sbjct: 588 KGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQ 647
Query: 713 ---------WNVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDG 763
NV++G AE+A+ + P SGSY + N +A W A ++RK M
Sbjct: 648 SMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKN 707
Query: 764 LMKEAGRSWIEVNN-----EVHAFVARDKSHHAADLTYSILDNLILHIKGVGYV 812
+ KEAG SWI+V + + F + DKSH +D Y +++ + L + G V
Sbjct: 708 VSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKV 761
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/551 (26%), Positives = 287/551 (52%), Gaps = 20/551 (3%)
Query: 73 QVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKG 132
Q+H SG ++N ++ Y KA D A +F+ + + ++VSW++++S G
Sbjct: 97 QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILS-----G 151
Query: 133 YGEEALMV-FIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
+ + + + F+ +K D + S+ + C G +G +G Q+ S V+K+G +
Sbjct: 152 FDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCV----GSEGFLLGLQLQSTVVKTGLES 207
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDL-SLNLFNQM 250
D+ VG S + +Y+++GS A+ VFD + K +SW ++++G + G ++ +F M
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM 267
Query: 251 RETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRV 310
V D +SV++ C + +QIH ++RG + V N+LM YSKCG +
Sbjct: 268 MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 327
Query: 311 KMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSC 370
+ + +F ++ +N++SWTT+I +S +A+ +F M G P++ ++ +
Sbjct: 328 EAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAV 382
Query: 371 GSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYN 430
E +++G ++H K S+ V NS + +YAK ++L +A+K F+ + R ++S+N
Sbjct: 383 KCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWN 442
Query: 431 AMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSV--FSLESSKQIHGLII 488
AMI G+++ EAL +F P TF S+L + S++ ++ H ++
Sbjct: 443 AMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLL 501
Query: 489 KYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIK 548
K G+ SAL+D Y+K + ++ VF+EM+Q++ VW +++ Y+ + E +
Sbjct: 502 KLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMN 561
Query: 549 LYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKL-GLDFDSFITSALIDMY 607
L+ +++ P+ TF +++TA + G + G + N +I++ L+ S ++DM
Sbjct: 562 LFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDML 621
Query: 608 AKCGSLEDAYE 618
+ G L++A E
Sbjct: 622 GRAGRLKEAEE 632
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 179/349 (51%), Gaps = 14/349 (4%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
+Q+H G + + N+L+ YSK L+ + +F MSERN+VSW++++S
Sbjct: 296 RQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS----- 350
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
++A+ +F+ ++ P++ +I A + G ++H IK+GF
Sbjct: 351 SNKDDAVSIFLN-MRFDGVYPNEVTFVGLINAVK----CNEQIKEGLKIHGLCIKTGFVS 405
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
+ VG S + LYAK +++DAK F+ + + +SW +I+G+ ++G S +L +F
Sbjct: 406 EPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA- 464
Query: 252 ETDVVHDKYLLSSVLSACSMLQ--FVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGR 309
+ + ++Y SVL+A + + V G++ HAH+L+ G+ V + L+D Y+K G
Sbjct: 465 AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGN 524
Query: 310 VKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTS 369
+ + ++F+E+ KN WT++I Y + M LF +M + PD SVLT+
Sbjct: 525 IDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTA 584
Query: 370 CGSVEALEQGRQVHAYSFKA-NIESDNFVKNSLVDMYAKCDSLTEARKV 417
C +++G ++ + N+E + + +VDM + L EA ++
Sbjct: 585 CNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEEL 633
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 135/269 (50%), Gaps = 29/269 (10%)
Query: 68 ITCYKQVHAQIAISGLQCDT------FLANMLLRNYSKANDLDGARKLFDTMSERNLVSW 121
+ C +Q+ + I GL T + N + Y+K L+ A+K F+ ++ R ++SW
Sbjct: 382 VKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISW 441
Query: 122 SSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGD-GGNVGEQM 180
++++S + + G+ EAL +F+ P++Y SV+ A + D G++
Sbjct: 442 NAMISGFAQNGFSHEALKMFLS--AAAETMPNEYTFGSVLNA---IAFAEDISVKQGQRC 496
Query: 181 HSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRS 240
H+ ++K G + V ++L+++YAK G++D+++ VF+ + K WT+II+ Y G
Sbjct: 497 HAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDF 556
Query: 241 DLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINV- 299
+ +NLF++M + +V D SVL+AC+ V G +I M + V N+
Sbjct: 557 ETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEI--------FNMMIEVYNLE 608
Query: 300 --------LMDFYSKCGRVKMARRLFDEI 320
++D + GR+K A L E+
Sbjct: 609 PSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/717 (32%), Positives = 391/717 (54%), Gaps = 48/717 (6%)
Query: 93 LLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTK-KGYGEEALMVFIGFLKVGNGR 151
L+ +SK + A K+F N+ W+++++ + + YG A+ + VG +
Sbjct: 191 LIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYG--AVFDLFHEMCVGFQK 248
Query: 152 PDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDD 211
PD Y SSV+ AC L + G+ + + VIK G + DV+V T++++LYAK G + +
Sbjct: 249 PDSYTYSSVLAACASL----EKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAE 303
Query: 212 AKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSM 271
A VF + + VSWT +++GY KS + +L +F +MR + V + ++SV+SAC
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 272 LQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLF---DEIEVKNIISW 328
V Q+HA V + G +D SV L+ YSK G + ++ ++F D+I+ +NI++
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN- 422
Query: 329 TTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFK 388
+I + Q+ +A++LFT M + G + D+F+ S+L+ ++ L G+QVH Y+ K
Sbjct: 423 -VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLK 478
Query: 389 ANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDL 448
+ + D V +SL +Y+KC SL E+ K+F + ++ + +MI G+++ L EA+ L
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 449 FHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSK 508
F EM P T ++L + SS SL K+IHG ++ G+ + GSAL++ YSK
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 509 CFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAAL 568
C S K AR V+D + + D V ++++ GY+Q ++ L+ ++++S + F +++
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSI 658
Query: 569 ITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDV 628
+ AA+ G Q H ++ K+GL + + S+L+ MY+K GS++D + F D+
Sbjct: 659 LKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDL 718
Query: 629 ACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQS 688
W ++I + A HG+ +AL ++ M +G +P+ +TFVGVLSACSH GL+E+ H S
Sbjct: 719 IAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNS 778
Query: 689 MA-GFGIEPGMEHYASVVSLLGRN--------------------VW-----------NVE 716
M +GIEP HY +V LGR+ VW VE
Sbjct: 779 MVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
Query: 717 LGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAGRSWI 773
LG+ AA+ AI ++P D+G+Y LSN A W + ++ RK M G+ KE G S +
Sbjct: 839 LGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 278 bits (712), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 188/599 (31%), Positives = 315/599 (52%), Gaps = 26/599 (4%)
Query: 83 LQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEAL---- 138
L D FL LL YS + + A KLFDT+ + ++VS + ++S Y + EE+L
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 139 -MVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGT 197
M F+GF ++ SVI AC+ L E + IK G+ V +
Sbjct: 140 KMHFLGF------EANEISYGSVISACSAL----QAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 198 SLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVH 257
+L+++++KN +DA VF + W TII G +++ +LF++M
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKP 249
Query: 258 DKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLF 317
D Y SSVL+AC+ L+ + GK + A V++ G DV V ++D Y+KCG + A +F
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 318 DEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALE 377
I +++SWT ++ GY +++ A+++F EM SG + ++ +SV+++CG +
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 378 QGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMAD---RNVVSYNAMIE 434
+ QVHA+ FK+ D+ V +L+ MY+K + + +VF+ + D +N+V N MI
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 435 GYSKEEKLSEALDLFHEMRVGFVPPGLLT-FVSLLGLSSSVFSLESSKQIHGLIIKYGVF 493
+S+ +K +A+ LF M + GL T S+ L S + L KQ+HG +K G+
Sbjct: 427 SFSQSKKPGKAIRLFTRM----LQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLV 482
Query: 494 LDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLEL 553
LD+ GS+L YSKC S +++ +F + +D W +M+ G+ + EAI L+ E+
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 554 LLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSL 613
L P+E T AA++T S+ SL G++ H + ++ G+D + SAL++MY+KCGSL
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSL 602
Query: 614 EDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSA 672
+ A + + D +S+I + HG LLFR+M++ G + +L A
Sbjct: 603 KLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Score = 263 bits (673), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 284/546 (52%), Gaps = 8/546 (1%)
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
DV++ SL++ Y+ +GS+ DA +FD + VS +I+GY + + SL F++M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
++ SV+SACS LQ + + H ++ G V + L+D +SK R +
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCG 371
A ++F + N+ W T+I G ++N LF EM KPD + SSVL +C
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 372 SVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNA 431
S+E L G+ V A K E D FV ++VD+YAKC + EA +VF + + +VVS+
Sbjct: 263 SLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 432 MIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYG 491
M+ GY+K AL++F EMR V T S++ + + Q+H + K G
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 492 VFLDVFAGSALIDAYSKCFSNKDARLVFDEMN--QRDIVVWNAMLLGYTQQLENEEAIKL 549
+LD +ALI YSK + VF++++ QR +V N M+ ++Q + +AI+L
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRL 440
Query: 550 YLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAK 609
+ +L R +EF+ +L++ L L G+Q H + +K GL D + S+L +Y+K
Sbjct: 441 FTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSK 497
Query: 610 CGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGV 669
CGSLE++Y+ F +KD ACW SMI +G +A+ LF EM+ +G P+ T V
Sbjct: 498 CGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAV 557
Query: 670 LSACSHAGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLLGRNVWNVELGRYAAEMAISID 729
L+ CS + G + GI+ GM+ +++V++ + +++L R + +D
Sbjct: 558 LTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK-CGSLKLARQVYDRLPELD 616
Query: 730 PMDSGS 735
P+ S
Sbjct: 617 PVSCSS 622
Score = 186 bits (471), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 214/424 (50%), Gaps = 14/424 (3%)
Query: 279 KQIHAHVLRRGM-GMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQ 337
K + AH+LRR + DV + L+ +YS G + A +LFD I +++S +I GY Q
Sbjct: 68 KILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQ 127
Query: 338 NSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFV 397
+ E+++ F++M G++ ++ + SV+++C +++A V ++ K V
Sbjct: 128 HRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVV 187
Query: 398 KNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFV 457
+++L+D+++K +A KVF NV +N +I G + + DLFHEM VGF
Sbjct: 188 ESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ 247
Query: 458 PPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARL 517
P T+ S+L +S+ L K + +IK G DVF +A++D Y+KC +A
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGHMAEAME 306
Query: 518 VFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGS 577
VF + +V W ML GYT+ + A++++ E+ S N T ++I+A
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSM 366
Query: 578 LKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSL---EDAYETFGSTTWKDVACWNSM 634
+ Q H + K G DS + +ALI MY+K G + E +E +++ N M
Sbjct: 367 VCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVM 424
Query: 635 ICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAGFGI 694
I + + +P KA+ LF M+ EGL + + +LS + D L+ + + G+ +
Sbjct: 425 ITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS-------VLDCLNLGKQVHGYTL 477
Query: 695 EPGM 698
+ G+
Sbjct: 478 KSGL 481
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 180/351 (51%), Gaps = 6/351 (1%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
KQVH SGL D + + L YSK L+ + KLF + ++ W+S++S + +
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
GY EA+ +F L G PD+ L++V+ C+ G+++H + +++G D+
Sbjct: 530 GYLREAIGLFSEMLDDGTS-PDESTLAAVLTVCSS----HPSLPRGKEIHGYTLRAGIDK 584
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
+ +G++L+N+Y+K GS+ A+ V+D L VS +++I+GY + G LF M
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMV 644
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
+ D + +SS+L A ++ G Q+HA++ + G+ + SV + L+ YSK G +
Sbjct: 645 MSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSID 704
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCG 371
+ F +I ++I+WT LI Y Q+ EA++++ M G+KPD VL++C
Sbjct: 705 DCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS 764
Query: 372 SVEALEQGR-QVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVM 421
+E+ +++ IE +N +VD + L EA + M
Sbjct: 765 HGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNM 815
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 73 QVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKG 132
QVHA I GL + + + LL YSK +D K F ++ +L++W++L++ Y + G
Sbjct: 673 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHG 732
Query: 133 YGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGE---QMHSFVIKSGF 189
EAL V+ +K +PD V+ AC+ GG V E ++S V G
Sbjct: 733 KANEALQVY-NLMKEKGFKPDKVTFVGVLSACSH------GGLVEESYFHLNSMVKDYGI 785
Query: 190 DRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKT-AVSWTTIITGYVKSGRSDL 242
+ + +++ ++G + +A+ + + +K A+ W T++ G +L
Sbjct: 786 EPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/670 (32%), Positives = 357/670 (53%), Gaps = 42/670 (6%)
Query: 180 MHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGR 239
+H+ ++ S ++V + L+NLY G+V A+ FD + + +W +I+GY ++G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 240 SDLSLNLFNQ-MRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVIN 298
S + F+ M + + D SVL AC + V G +IH L+ G DV V
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAA 189
Query: 299 VLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKP 358
L+ YS+ V AR LFDE+ V+++ SW +I GY Q+ +EA+ L +
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AM 245
Query: 359 DDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVF 418
D S+L++C +G +H+YS K +ES+ FV N L+D+YA+ L + +KVF
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 419 DVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLE 478
D M R+++S+N++I+ Y E+ A+ LF EMR+ + P LT +SL + S + +
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Query: 479 SSKQIHGLIIKYGVFL-DVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGY 537
+ + + G ++ G FL D+ G+A++ Y+K AR VF+ + D++ WN ++ GY
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 538 TQQLENEEAIKLY-LELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFD 596
Q EAI++Y + + N+ T+ +++ A S G+L+ G + H L+K GL D
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485
Query: 597 SFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMII 656
F+ ++L DMY KCG LEDA F + WN++I + HG KA++LF+EM+
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Query: 657 EGLEPNYITFVGVLSACSHAGLIEDGLDHFQSM-AGFGIEPGMEHYASVVSLLGR----- 710
EG++P++ITFV +LSACSH+GL+++G F+ M +GI P ++HY +V + GR
Sbjct: 546 EGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLE 605
Query: 711 ---------------NVW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFA 744
++W NV+LG+ A+E ++P G + LLSN +A
Sbjct: 606 TALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYA 665
Query: 745 CNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLIL 804
W ++R GL K G S +EV+N+V F +++H + Y L L
Sbjct: 666 SAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQA 725
Query: 805 HIKGVGYVPN 814
+K +GYVP+
Sbjct: 726 KLKMIGYVPD 735
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 183/636 (28%), Positives = 330/636 (51%), Gaps = 26/636 (4%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
K +HA++ +S + ++ L+ Y ++ AR FD + R++ +W+ ++S Y +
Sbjct: 71 KCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRA 130
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
G E + F F+ PD SV+ AC + G ++H +K GF
Sbjct: 131 GNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDG-------NKIHCLALKFGFMW 183
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
DVYV SL++LY++ +V +A+ +FD + V+ SW +I+GY +SG + +L L N +R
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
D V + S+LSAC+ G IH++ ++ G+ ++ V N L+D Y++ GR++
Sbjct: 244 AMDSV----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDF---ACSSVLT 368
+++FD + V+++ISW ++I Y N A+ LF EM S +PD + +S+L+
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 369 SCGSVEALEQGRQVHAYSF-KANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVV 427
G + A R V ++ K D + N++V MYAK + AR VF+ + + +V+
Sbjct: 360 QLGDIRAC---RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 416
Query: 428 SYNAMIEGYSKEEKLSEALDLFHEM-RVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGL 486
S+N +I GY++ SEA+++++ M G + T+VS+L S +L ++HG
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 487 IIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEA 546
++K G++LDVF ++L D Y KC +DA +F ++ + + V WN ++ + E+A
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 536
Query: 547 IKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQ-FHNHLIKLGLDFDSFITSALID 605
+ L+ E+L +P+ TF L++A S+ G + GQ F G+ ++D
Sbjct: 537 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVD 596
Query: 606 MYAKCGSLEDAYETFGSTTWK-DVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYI 664
MY + G LE A + S + + D + W +++ HG + + E + E +EP ++
Sbjct: 597 MYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN-VDLGKIASEHLFE-VEPEHV 654
Query: 665 TFVGVLSACSHAGLIEDGLDHFQSMA---GFGIEPG 697
+ +LS + +G+D +S+A G PG
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG 690
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 18/228 (7%)
Query: 476 SLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLL 535
+L+S+K +H ++ +V + L++ Y + AR FD + RD+ WN M+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 536 GYTQQLENEEAIKLY-LELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLD 594
GY + + E I+ + L +L S P+ TF +++ A ++ G + H +K G
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFM 182
Query: 595 FDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLL---F 651
+D ++ ++LI +Y++ ++ +A F +D+ WN+MI G +AL L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 652 REMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAGFGIEPGME 699
R M + +T V +LSAC+ AG G+ ++ + I+ G+E
Sbjct: 243 RAM-------DSVTVVSLLSACTEAGDFNRGV----TIHSYSIKHGLE 279
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 365 bits (936), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 220/667 (32%), Positives = 358/667 (53%), Gaps = 40/667 (5%)
Query: 176 VGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYV 235
+G+ H +IKS + +Y+ +L+N+Y K + A+ +FD + + +S+ ++I+GY
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 236 KSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVS 295
+ G + ++ LF + RE ++ DK+ + L C + G+ +H V+ G+ V
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 296 VINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSG 355
+INVL+D YSKCG++ A LFD + ++ +SW +LI GY++ E + L +M R G
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDG 244
Query: 356 WKPDDFACSSVLTSCG---SVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLT 412
+A SVL +C + +E+G +H Y+ K +E D V+ +L+DMYAK SL
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLK 304
Query: 413 EARKVFDVMADRNVVSYNAMIEGYSK-----EEKLSEALDLFHEMRVGFVPPGLLTFVSL 467
EA K+F +M +NVV+YNAMI G+ + +E SEA LF +M+ + P TF +
Sbjct: 305 EAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVV 364
Query: 468 LGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDI 527
L S+ +LE +QIH LI K D F GSALI+ Y+ S +D F +++DI
Sbjct: 365 LKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDI 424
Query: 528 VVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNH 587
W +M+ + Q + E A L+ +L S RP E+T + +++A ++ +L G+Q +
Sbjct: 425 ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGY 484
Query: 588 LIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKA 647
IK G+D + + ++ I MYAK G++ A + F DVA +++MI + A HG +A
Sbjct: 485 AIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEA 544
Query: 648 LLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAG-FGIEPGMEHYASVVS 706
L +F M G++PN F+GVL AC H GL+ GL +FQ M + I P +H+ +V
Sbjct: 545 LNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVD 604
Query: 707 LLGRN--------------------VWNVEL-----------GRYAAEMAISIDPMDSGS 735
LLGR W L G+ AE + ++P SGS
Sbjct: 605 LLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGS 664
Query: 736 YTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLT 795
Y LL N + + + + A++VR+ M G+ KE SWI + N+ H+F D SH ++ +
Sbjct: 665 YVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMI 724
Query: 796 YSILDNL 802
Y++L+ +
Sbjct: 725 YTMLETM 731
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/551 (28%), Positives = 287/551 (52%), Gaps = 19/551 (3%)
Query: 97 YSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYI 156
Y K +L AR+LFD M ERN++S++SL+S YT+ G+ E+A+ +F+ + N + D +
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLE-AREANLKLDKFT 150
Query: 157 LSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVF 216
+ + C G ++GE +H V+ +G + V++ L+++Y+K G +D A +F
Sbjct: 151 YAGALGFC----GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF 206
Query: 217 DGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSM---LQ 273
D + VSW ++I+GYV+ G ++ LNL +M + Y L SVL AC +
Sbjct: 207 DRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEG 266
Query: 274 FVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIG 333
F+ G IH + + GM D+ V L+D Y+K G +K A +LF + KN++++ +I
Sbjct: 267 FIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMIS 326
Query: 334 GYMQ-----NSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFK 388
G++Q + EA KLF +M R G +P S VL +C + + LE GRQ+HA K
Sbjct: 327 GFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICK 386
Query: 389 ANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDL 448
N +SD F+ ++L+++YA S + + F + +++ S+ +MI+ + + E+L A DL
Sbjct: 387 NNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDL 446
Query: 449 FHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSK 508
F ++ + P T ++ + +L S +QI G IK G+ ++ I Y+K
Sbjct: 447 FRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAK 506
Query: 509 CFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAAL 568
+ A VF E+ D+ ++AM+ Q EA+ ++ + +PN+ F +
Sbjct: 507 SGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGV 566
Query: 569 ITAASNLGSLKHGQQFHNHL---IKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTW 625
+ A + G + G ++ + ++ + F + L+D+ + G L DA S+ +
Sbjct: 567 LIACCHGGLVTQGLKYFQCMKNDYRINPNEKHF--TCLVDLLGRTGRLSDAENLILSSGF 624
Query: 626 KD-VACWNSMI 635
+D W +++
Sbjct: 625 QDHPVTWRALL 635
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 175/364 (48%), Gaps = 15/364 (4%)
Query: 62 NFNNKRITCYKQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSW 121
N N I +H A G++ D + LL Y+K L A KLF M +N+V++
Sbjct: 262 NLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTY 321
Query: 122 SSLVSMYTK-----KGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNV 176
++++S + + EA +F+ + G P S V+ AC+
Sbjct: 322 NAMISGFLQMDEITDEASSEAFKLFMDMQRRGL-EPSPSTFSVVLKACS----AAKTLEY 376
Query: 177 GEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVK 236
G Q+H+ + K+ F D ++G++L+ LYA GS +D F + SWT++I +V+
Sbjct: 377 GRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQ 436
Query: 237 SGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSV 296
+ + + + +LF Q+ + + ++Y +S ++SAC+ + G+QI + ++ G+ SV
Sbjct: 437 NEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSV 496
Query: 297 INVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGW 356
+ Y+K G + +A ++F E++ ++ +++ +I Q+ EA+ +F M G
Sbjct: 497 KTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGI 556
Query: 357 KPDDFACSSVLTSCGSVEALEQGR---QVHAYSFKANIESDNFVKNSLVDMYAKCDSLTE 413
KP+ A VL +C + QG Q ++ N +F LVD+ + L++
Sbjct: 557 KPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFT--CLVDLLGRTGRLSD 614
Query: 414 ARKV 417
A +
Sbjct: 615 AENL 618
Score = 42.0 bits (97), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 565 FAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTT 624
+ L A+ GS+ G+ H H+IK L+ ++ + L++MY KC L A + F
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 625 WKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSAC 673
+++ +NS+I G +A+ LF E L+ + T+ G L C
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFC 158
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 362 bits (928), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 231/758 (30%), Positives = 398/758 (52%), Gaps = 45/758 (5%)
Query: 64 NNKRITCYKQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSS 123
N+ RI + +H + GL + L N LL Y K + + ARKLFD MS R + +W+
Sbjct: 37 NSSRIGLH--IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTV 94
Query: 124 LVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSF 183
++S +TK AL +F + G P+++ SSV+ +C L GG V H
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASGT-HPNEFTFSSVVRSCAGLRDISYGGRV----HGS 149
Query: 184 VIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLS 243
VIK+GF+ + VG+SL +LY+K G +A +F L +SWT +I+ V + + +
Sbjct: 150 VIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREA 209
Query: 244 LNLFNQMRETDVVHDKYLLSSVLSACSML--QFVGGGKQIHAHVLRRGMGMDVSVINVLM 301
L +++M + V +++ +L A S L +F GK IH++++ RG+ ++V + L+
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEF---GKTIHSNIIVRGIPLNVVLKTSLV 266
Query: 302 DFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDF 361
DFYS+ +++ A R+ + +++ WT+++ G+++N +EA+ F EM G +P++F
Sbjct: 267 DFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNF 326
Query: 362 ACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCD-SLTEARKVFDV 420
S++L+ C +V +L+ G+Q+H+ + K E V N+LVDMY KC S EA +VF
Sbjct: 327 TYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGA 386
Query: 421 MADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESS 480
M NVVS+ +I G + + L EM V P ++T +L S + +
Sbjct: 387 MVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 481 KQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQ 540
+IH +++ V ++ G++L+DAY+ A V M +RD + + +++ + +
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNEL 506
Query: 541 LENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFIT 600
++E A+ + + R ++ + I+A++NLG+L+ G+ H + +K G + +
Sbjct: 507 GKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVL 566
Query: 601 SALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLE 660
++L+DMY+KCGSLEDA + F DV WN ++ A +G AL F EM ++ E
Sbjct: 567 NSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETE 626
Query: 661 PNYITFVGVLSACSHAGLIEDGLDHFQSMAG-FGIEPGMEHYASVVSLLGRN-------- 711
P+ +TF+ +LSACS+ L + GL++FQ M + IEP +EHY +V +LGR
Sbjct: 627 PDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATG 686
Query: 712 -----------------------VWNVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSM 748
N+ LG A +++ P D Y LL++ + +
Sbjct: 687 VVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGK 746
Query: 749 WADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARD 786
A++ R M L K+ G+S +EV +VH+FV+ D
Sbjct: 747 PELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSED 784
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 360 bits (925), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 230/781 (29%), Positives = 407/781 (52%), Gaps = 84/781 (10%)
Query: 72 KQVHAQIAISG--LQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYT 129
KQ+HA+I +G + ++ L+ Y+K + L+ A LF + RN+ SW++++ +
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKC 149
Query: 130 KKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGF 189
+ G E ALM F+ L+ PD++++ +V AC G G +H +V+KSG
Sbjct: 150 RIGLCEGALMGFVEMLE-NEIFPDNFVVPNVCKAC----GALKWSRFGRGVHGYVVKSGL 204
Query: 190 DRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQ 249
+ V+V +SL ++Y K G +DDA VFD + + AV+W ++ GYV++G+++ ++ LF+
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 250 MRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGR 309
MR+ V + +S+ LSA + + V GKQ HA + GM +D + L++FY K G
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 310 VKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTS 369
++ A +FD + K++++W +I GY+Q +A+ + M K D ++++++
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 370 CGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSY 429
E L+ G++V Y + + ESD + ++++DMYAKC S+ +A+KVFD +++++ +
Sbjct: 385 AARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILW 444
Query: 430 NAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIK 489
N ++ Y++ EAL LF+ M++ VPP ++T+ + + SL + Q+
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLI------ILSLLRNGQV------ 492
Query: 490 YGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVV----WNAMLLGYTQQLENEE 545
+A+ +F +M I+ W M+ G Q +EE
Sbjct: 493 -----------------------DEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 529
Query: 546 AIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFIT--SAL 603
AI ++ S RPN F+ ++A ++L SL G+ H ++I+ L S ++ ++L
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR-NLQHSSLVSIETSL 588
Query: 604 IDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNY 663
+DMYAKCG + A + FGS + ++ N+MI A +G +A+ L+R + GL+P+
Sbjct: 589 VDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDN 648
Query: 664 ITFVGVLSACSHAGLIEDGLDHFQSM-AGFGIEPGMEHYASVVSLL-------------- 708
IT VLSAC+HAG I ++ F + + ++P +EHY +V LL
Sbjct: 649 ITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIE 708
Query: 709 -------GRNVWNV----------ELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWAD 751
R + ++ EL Y + + +P +SG+Y +SN +A W +
Sbjct: 709 EMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDE 768
Query: 752 AKQVRKKMDLDGLMKEAGRSWIEVNNE--VHAFVARDKSHHAADLTYSILDNLILHIKGV 809
++R+ M GL K+ G SWI++ E VH FVA DK+H + +L L+L+ G
Sbjct: 769 VVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML-ALLLYDMGT 827
Query: 810 G 810
G
Sbjct: 828 G 828
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/491 (32%), Positives = 271/491 (55%), Gaps = 2/491 (0%)
Query: 223 TAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIH 282
++ S+ ++ K+G +L+L +M ++ + +L C + + GKQIH
Sbjct: 34 SSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIH 93
Query: 283 AHVLRRG--MGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSF 340
A +L+ G + + L+ FY+KC +++A LF ++ V+N+ SW +IG +
Sbjct: 94 ARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGL 153
Query: 341 DREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNS 400
A+ F EM + PD+F +V +CG+++ GR VH Y K+ +E FV +S
Sbjct: 154 CEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASS 213
Query: 401 LVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPG 460
L DMY KC L +A KVFD + DRN V++NA++ GY + K EA+ LF +MR V P
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273
Query: 461 LLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFD 520
+T + L S+++ +E KQ H + I G+ LD G++L++ Y K + A +VFD
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD 333
Query: 521 EMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKH 580
M ++D+V WN ++ GY QQ E+AI + + L + + + T A L++AA+ +LK
Sbjct: 334 RMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL 393
Query: 581 GQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAH 640
G++ + I+ + D + S ++DMYAKCGS+ DA + F ST KD+ WN+++ A
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAE 453
Query: 641 HGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAGFGIEPGMEH 700
G +AL LF M +EG+ PN IT+ ++ + G +++ D F M GI P +
Sbjct: 454 SGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLIS 513
Query: 701 YASVVSLLGRN 711
+ ++++ + +N
Sbjct: 514 WTTMMNGMVQN 524
Score = 244 bits (622), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 266/503 (52%), Gaps = 33/503 (6%)
Query: 175 NVGEQMHSFVIKSG--FDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIIT 232
+ G+Q+H+ ++K+G + R+ Y+ T L+ YAK +++ A+ +F L V+ SW II
Sbjct: 87 STGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIG 146
Query: 233 GYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGM 292
+ G + +L F +M E ++ D +++ +V AC L++ G+ +H +V++ G+
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLED 206
Query: 293 DVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMT 352
V V + L D Y KCG + A ++FDEI +N ++W L+ GY+QN + EA++LF++M
Sbjct: 207 CVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMR 266
Query: 353 RSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLT 412
+ G +P S+ L++ ++ +E+G+Q HA + +E DN + SL++ Y K +
Sbjct: 267 KQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIE 326
Query: 413 EARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSS 472
A VFD M +++VV++N +I GY ++ + +A+ + MR+ + +T +L+ ++
Sbjct: 327 YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA 386
Query: 473 SVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNA 532
+L+ K++ I++ D+ S ++D Y+KC S DA+ VFD ++D+++WN
Sbjct: 387 RTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNT 446
Query: 533 MLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLG 592
+L Y + + EA++L+ + L PN T+ +I L L++GQ
Sbjct: 447 LLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII-----LSLLRNGQ---------- 491
Query: 593 LDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFR 652
DM+ + S S ++ W +M+ +G +A+L R
Sbjct: 492 -------VDEAKDMFLQMQS---------SGIIPNLISWTTMMNGMVQNGCSEEAILFLR 535
Query: 653 EMIIEGLEPNYITFVGVLSACSH 675
+M GL PN + LSAC+H
Sbjct: 536 KMQESGLRPNAFSITVALSACAH 558
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 358 bits (919), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/660 (31%), Positives = 356/660 (53%), Gaps = 41/660 (6%)
Query: 198 SLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETD--V 255
++++ + K G V A+ +FD + +T V+WT ++ Y ++ D + LF QM +
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCT 143
Query: 256 VHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMD--VSVINVLMDFYSKCGRVKMA 313
+ D +++L C+ Q+HA ++ G + ++V NVL+ Y + R+ +A
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 314 RRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSV 373
LF+EI K+ +++ TLI GY ++ E++ LF +M +SG +P DF S VL + +
Sbjct: 204 CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGL 263
Query: 374 EALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMI 433
G+Q+HA S D V N ++D Y+K D + E R +FD M + + VSYN +I
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 434 EGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIH--GLIIKYG 491
YS+ ++ +L F EM+ F ++L +++++ SL+ +Q+H L+
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD 383
Query: 492 VFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYL 551
L V G++L+D Y+KC ++A L+F + QR V W A++ GY Q+ + +KL+
Sbjct: 384 SILHV--GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFT 441
Query: 552 ELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCG 611
++ S R ++ TFA ++ A+++ SL G+Q H +I+ G + F S L+DMYAKCG
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 501
Query: 612 SLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLS 671
S++DA + F ++ WN++I +A +G+ A+ F +MI GL+P+ ++ +GVL+
Sbjct: 502 SIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561
Query: 672 ACSHAGLIEDGLDHFQSMAG-FGIEPGMEHYASVVSLLGRN------------------- 711
ACSH G +E G ++FQ+M+ +GI P +HYA ++ LLGRN
Sbjct: 562 ACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDE 621
Query: 712 -VW-----------NVELGRYAAEMAISIDPM-DSGSYTLLSNTFACNSMWADAKQVRKK 758
+W N L AAE S++ + D+ +Y +SN +A W + V+K
Sbjct: 622 IMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKA 681
Query: 759 MDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIKGVGYVPNTSAL 818
M G+ K SW+EVN+++H F + D++H D ++ L I+ GY P+TS++
Sbjct: 682 MRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSV 741
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 200/429 (46%), Gaps = 35/429 (8%)
Query: 279 KQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKN-------------- 324
+++ A +++ G D N +++ + G+V AR+++DE+ KN
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 325 -----------------IISWTTLIGGYMQNSFDREAMKLFTEMTRSG--WKPDDFACSS 365
+++WT L+G Y +NS EA KLF +M RS PD ++
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 366 VLTSCGSVEALEQGRQVHAYSFKANIESDNF--VKNSLVDMYAKCDSLTEARKVFDVMAD 423
+L C QVHA++ K +++ F V N L+ Y + L A +F+ + +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 424 RNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQI 483
++ V++N +I GY K+ +E++ LF +MR P TF +L + +Q+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 484 HGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLEN 543
H L + G D G+ ++D YSK + R++FDEM + D V +N ++ Y+Q +
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 544 EEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSAL 603
E ++ + E+ F FA +++ A+NL SL+ G+Q H + D + ++L
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSL 392
Query: 604 IDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNY 663
+DMYAKC E+A F S + W ++I G L LF +M L +
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQ 452
Query: 664 ITFVGVLSA 672
TF VL A
Sbjct: 453 STFATVLKA 461
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 181/351 (51%), Gaps = 6/351 (1%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
+Q+HA +G D + N +L YSK + + R LFD M E + VS++ ++S Y++
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
E +L F +G R ++ ++++ L +G Q+H + + D
Sbjct: 330 DQYEASLHFFREMQCMGFDR-RNFPFATMLSIAANLS----SLQMGRQLHCQALLATADS 384
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
++VG SL+++YAK ++A+ +F L +T VSWT +I+GYV+ G L LF +MR
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
+++ D+ ++VL A + + GKQ+HA ++R G +V + L+D Y+KCG +K
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCG 371
A ++F+E+ +N +SW LI + N A+ F +M SG +PD + VLT+C
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 372 SVEALEQGRQ-VHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVM 421
+EQG + A S I ++D+ + EA K+ D M
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 145/284 (51%), Gaps = 11/284 (3%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
+Q+H Q ++ + N L+ Y+K + A +F ++ +R VSW++L+S Y +K
Sbjct: 371 RQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK 430
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
G L +F ++ N R D ++V+ A +G+Q+H+F+I+SG
Sbjct: 431 GLHGAGLKLFTK-MRGSNLRADQSTFATVLKASASFA----SLLLGKQLHAFIIRSGNLE 485
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
+V+ G+ L+++YAK GS+ DA VF+ + + AVSW +I+ + +G + ++ F +M
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQ-IHAHVLRRGMGMDVSVINVLMDFYSKCGRV 310
E+ + D + VL+ACS FV G + A G+ ++D + GR
Sbjct: 546 ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRF 605
Query: 311 KMARRLFDEIEVK-NIISWTTLIGGYM----QNSFDREAMKLFT 349
A +L DE+ + + I W++++ Q+ +R A KLF+
Sbjct: 606 AEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS 649
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 152/346 (43%), Gaps = 36/346 (10%)
Query: 380 RQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKE 439
R+V A K ++D N +V+ + ++ ARKV+D M +N VS N MI G+ K
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 440 EKLSEALDLFHEMR----------VGFVP-----------------------PGLLTFVS 466
+S A DLF M +G+ P +TF +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 467 LLGLSSSVFSLESSKQIHGLIIKYGVFLDVF--AGSALIDAYSKCFSNKDARLVFDEMNQ 524
LL + + Q+H +K G + F + L+ +Y + A ++F+E+ +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 525 RDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQF 584
+D V +N ++ GY + E+I L+L++ S +P++FTF+ ++ A L GQQ
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 585 HNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEP 644
H + G D+ + + ++D Y+K + + F D +N +I + + +
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 645 MKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLD-HFQSM 689
+L FREM G + F +LS ++ ++ G H Q++
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378
>sp|O49680|PP324_ARATH Pentatricopeptide repeat-containing protein At4g19220,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E2 PE=3
SV=2
Length = 951
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 228/745 (30%), Positives = 386/745 (51%), Gaps = 53/745 (7%)
Query: 74 VHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGY 133
+H +GL D+ L N L+ Y+K +L A +F M R++VSW+++++ G+
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 134 GEEALMVFIGFLKVGNGRPDDYI-LSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRD 192
++L F G+G+ D + S VI AC+ + + +GE +H VIKSG+ +
Sbjct: 270 PRKSLQYFKSM--TGSGQEADTVTFSCVISACSSI----EELTLGESLHGLVIKSGYSPE 323
Query: 193 --VYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQM 250
V VG S++++Y+K G + A+ VF+ L+ + +S I+ G+ +G + + + NQM
Sbjct: 324 AHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM 383
Query: 251 RETDVVH-DKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGM-GMDVSVINVLMDFYSKCG 308
+ D + D + S+ S C L F G+ +H + +R M + VIN ++D Y KCG
Sbjct: 384 QSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCG 443
Query: 309 RVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVL- 367
A LF ++++SW ++I + QN F +A LF E+ S + F+ S+VL
Sbjct: 444 LTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV-SEYSCSKFSLSTVLA 502
Query: 368 --TSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMAD-R 424
TSC S ++L G+ VH + K + NS+++MY C LT A + M++ R
Sbjct: 503 ILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETR 562
Query: 425 NVVSYNAMIEGYSKEEKLSEALDLFHEM-RVGFVPPGLLTFVSLLGLSSSVFSLESSKQI 483
++ S+N++I G + E+L F M R G + L+T + + S ++ + +
Sbjct: 563 DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCF 622
Query: 484 HGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLEN 543
HGL IK LD + LI Y +C + A VF ++ ++ WN ++ +Q
Sbjct: 623 HGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAG 682
Query: 544 EEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSAL 603
E +L+ L L PNE TF L++A++ LGS +G Q H HLI+ G + F+++AL
Sbjct: 683 REVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAAL 739
Query: 604 IDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEG-LEPN 662
+DMY+ CG LE + F ++ ++ WNS+I + HG KA+ LF+E+ +EPN
Sbjct: 740 VDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPN 799
Query: 663 YITFVGVLSACSHAGLIEDGLDHFQSM-AGFGIEPGMEHYASVVSLLGR----------- 710
+F+ +LSACSH+G I++GL +++ M FG++P EH +V +LGR
Sbjct: 800 KSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFI 859
Query: 711 ---------NVW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWA 750
VW + +LG+ AE+ ++P ++ Y L+NT+ W
Sbjct: 860 TGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWE 919
Query: 751 DAKQVRKKMDLDGLMKEAGRSWIEV 775
+A ++RK ++ + L K G S I+V
Sbjct: 920 EAVRLRKMVEDNALKKLPGYSVIDV 944
Score = 246 bits (629), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 179/645 (27%), Positives = 313/645 (48%), Gaps = 24/645 (3%)
Query: 48 RSVLAWFLQRPLPDNFNNKRITCYKQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGAR 107
R VL F+ R + + VH GL D ++ LL Y + +L +
Sbjct: 91 RDVLRSFMMRTETET--------PRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSS 142
Query: 108 KLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQL 167
LFD + E++++ W+S+++ + G A+ +FI + GN +L + +
Sbjct: 143 CLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSL- 201
Query: 168 GGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSW 227
+H I++G D + +LMNLYAK ++ A+ VF + + VSW
Sbjct: 202 ----HLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSW 257
Query: 228 TTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLR 287
TI+T + +G SL F M + D S V+SACS ++ + G+ +H V++
Sbjct: 258 NTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIK 317
Query: 288 RGMGMD--VSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAM 345
G + VSV N ++ YSKCG + A +F+E+ +++IS ++ G+ N EA
Sbjct: 318 SGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAF 377
Query: 346 KLFTEM-TRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNF-VKNSLVD 403
+ +M + +PD S+ + CG + +GR VH Y+ + ++S V NS++D
Sbjct: 378 GILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVID 437
Query: 404 MYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPP--GL 461
MY KC T+A +F R++VS+N+MI +S+ +A +LF E+ + L
Sbjct: 438 MYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSL 497
Query: 462 LTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDE 521
T +++L S SL K +H + K G ++ + +++I+ Y C A L +
Sbjct: 498 STVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLET 557
Query: 522 MNQ-RDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQ-RPNEFTFAALITAASNLGSLK 579
M++ RD+ WN+++ G + E+++ + + + R + T I+A+ NLG +
Sbjct: 558 MSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVL 617
Query: 580 HGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNA 639
G+ FH IK + D+ + + LI MY +C +E A + FG + ++ WN +I +
Sbjct: 618 QGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALS 677
Query: 640 HHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLD 684
+ + LFR + LEPN ITFVG+LSA + G G+
Sbjct: 678 QNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQ 719
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 226/451 (50%), Gaps = 9/451 (1%)
Query: 232 TGYVKSGRSDLSLNLFNQM--RETDVVHDKYL-LSSVLSACSMLQFVGGGKQIHAHVLRR 288
T V S + + NLF+++ RE + ++ L VL + M + +H L+
Sbjct: 57 TSSVLSPVTPIVHNLFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKC 116
Query: 289 GMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLF 348
G+ D++ + L+ FY + G + + LFDE++ K++I W ++I QN A+ LF
Sbjct: 117 GLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLF 176
Query: 349 TEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKC 408
EM G + D ++ S+ + +H + + + D+ + N+L+++YAK
Sbjct: 177 IEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKG 236
Query: 409 DSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLL 468
++L+ A VF M R++VS+N ++ ++L F M +TF ++
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 469 GLSSSVFSLESSKQIHGLIIKYGVFLD--VFAGSALIDAYSKCFSNKDARLVFDEMNQRD 526
SS+ L + +HGL+IK G + V G+++I YSKC + A VF+E+ RD
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356
Query: 527 IVVWNAMLLGYTQQLENEEAIKLYLELL-LSQQRPNEFTFAALITAASNLGSLKHGQQFH 585
++ NA+L G+ EEA + ++ + + +P+ T ++ + +L + G+ H
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 586 NHLIKLGLDFDSF-ITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEP 644
+ +++ + + + +++IDMY KCG A F +TT +D+ WNSMI + +G
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFT 476
Query: 645 MKALLLFREMIIEGLEPNY--ITFVGVLSAC 673
KA LF+E++ E + T + +L++C
Sbjct: 477 HKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 141/292 (48%), Gaps = 20/292 (6%)
Query: 478 ESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGY 537
E+ + +H +K G+ D+ S L+ Y + + +FDE+ ++D++VWN+M+
Sbjct: 104 ETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITAL 163
Query: 538 TQQLENEEAIKLYLELLLSQQRPNEF---TFAALITAASNLGSLKHGQQFHNHLIKLGLD 594
Q A+ L++E++ + NEF T +A S+L + H I+ GL
Sbjct: 164 NQNGRYIAAVGLFIEMI---HKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLV 220
Query: 595 FDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREM 654
DS + +AL+++YAK +L A F +D+ WN+++ +G P K+L F+ M
Sbjct: 221 GDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSM 280
Query: 655 IIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAGFGIEPGMEHYA------SVVSLL 708
G E + +TF V+SACS IE+ L +S+ G I+ G A S++S+
Sbjct: 281 TGSGQEADTVTFSCVISACSS---IEE-LTLGESLHGLVIKSGYSPEAHVSVGNSIISMY 336
Query: 709 GRNVWNVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMD 760
+ + E E + D + S + + N FA N M+ +A + +M
Sbjct: 337 SK-CGDTEAAETVFEELVCRDVISSNA---ILNGFAANGMFEEAFGILNQMQ 384
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 85/193 (44%), Gaps = 6/193 (3%)
Query: 73 QVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKG 132
Q H + G Q + F++ L+ YS L+ K+F ++ +W+S++S + G
Sbjct: 719 QAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHG 778
Query: 133 YGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHS-FVIKSGFDR 191
GE+A+ +F P+ S++ AC+ G +G + +QM F +K +
Sbjct: 779 MGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEH 838
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGL-MVKTAVSWTTIITGYVKSGRSDLSLNLFNQM 250
V++ +++ + G + +A G+ + A W +++ G + L + +
Sbjct: 839 RVWI----VDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVL 894
Query: 251 RETDVVHDKYLLS 263
E + + Y +S
Sbjct: 895 FEMEPDNASYYIS 907
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 353 bits (906), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 211/664 (31%), Positives = 354/664 (53%), Gaps = 37/664 (5%)
Query: 180 MHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVS-WTTIITGYVKSG 238
+H ++ G RDV + SL+N+Y A+ VF+ +++ V W ++++GY K+
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 239 RSDLSLNLFNQMRETDV-VHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVI 297
+L +F ++ + V D + +V+ A L G+ IH V++ G DV V
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 298 NVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWK 357
+ L+ Y+K + + ++FDE+ +++ SW T+I + Q+ +A++LF M SG++
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 358 PDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKV 417
P+ + + +++C + LE+G+++H K E D +V ++LVDMY KCD L AR+V
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 418 FDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSL 477
F M +++V++N+MI+GY + +++ + M + P T S+L S +L
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Query: 478 ESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIV-VWNAMLLG 536
K IHG +I+ V D++ +LID Y KC A VF + Q+D+ WN M+
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWNVMISS 384
Query: 537 YTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFD 596
Y +A+++Y +++ +P+ TF +++ A S L +L+ G+Q H + + L+ D
Sbjct: 385 YISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETD 444
Query: 597 SFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMII 656
+ SAL+DMY+KCG+ ++A+ F S KDV W MI HG+P +AL F EM
Sbjct: 445 ELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQK 504
Query: 657 EGLEPNYITFVGVLSACSHAGLIEDGLDHFQSM-AGFGIEPGMEHYASVVSLLGRNVWNV 715
GL+P+ +T + VLSAC HAGLI++GL F M + +GIEP +EHY+ ++ +LGR +
Sbjct: 505 FGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLL 564
Query: 716 E--------------------------------LGRYAAEMAISIDPMDSGSYTLLSNTF 743
E LG A + + P D+ +Y +L N +
Sbjct: 565 EAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLY 624
Query: 744 ACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLI 803
A W A++VR KM GL K+ G SWIE++++V F A D+SH A+ Y L L
Sbjct: 625 ASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLS 684
Query: 804 LHIK 807
H++
Sbjct: 685 GHME 688
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/554 (29%), Positives = 286/554 (51%), Gaps = 6/554 (1%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVS-WSSLVSMYTK 130
K VH +I GL+ D L L+ Y D AR +F+ R+ V W+SL+S Y+K
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 131 KGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFD 190
+ L VF L PD + +VI A LG +G +H+ V+KSG+
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREF----LGRMIHTLVVKSGYV 139
Query: 191 RDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQM 250
DV V +SL+ +YAK +++ VFD + + SW T+I+ + +SG ++ +L LF +M
Sbjct: 140 CDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRM 199
Query: 251 RETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRV 310
+ + L+ +SACS L ++ GK+IH +++G +D V + L+D Y KC +
Sbjct: 200 ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCL 259
Query: 311 KMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSC 370
++AR +F ++ K++++W ++I GY+ + +++ M G +P +S+L +C
Sbjct: 260 EVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
Query: 371 GSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYN 430
L G+ +H Y ++ + +D +V SL+D+Y KC A VF S+N
Sbjct: 320 SRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWN 379
Query: 431 AMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKY 490
MI Y +A++++ +M V P ++TF S+L S + +LE KQIH I +
Sbjct: 380 VMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES 439
Query: 491 GVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLY 550
+ D SAL+D YSKC + K+A +F+ + ++D+V W M+ Y + EA+ +
Sbjct: 440 RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQF 499
Query: 551 LELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHL-IKLGLDFDSFITSALIDMYAK 609
E+ +P+ T A+++A + G + G +F + + K G++ S +ID+ +
Sbjct: 500 DEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGR 559
Query: 610 CGSLEDAYETFGST 623
G L +AYE T
Sbjct: 560 AGRLLEAYEIIQQT 573
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 351 bits (901), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 231/740 (31%), Positives = 392/740 (52%), Gaps = 38/740 (5%)
Query: 1 MRVHQRLTHSLRKPHHKIKNCNS----SNLLKSVTFSPRNPSLQSFNISTKRSVLAWFLQ 56
++VH L S KPH+++ N S +L + + S R+P + +N + A +
Sbjct: 22 LQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHR 81
Query: 57 RPL-------------PD--NFNNKRITC-----YKQ---VHAQIAISGLQCDTFLANML 93
L PD +F C +K+ +H IA GL+ D ++ L
Sbjct: 82 EALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTAL 141
Query: 94 LRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPD 153
+ Y KA DL AR++FD M +++V+W+++VS + G AL++F ++ D
Sbjct: 142 VEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHD-MRSCCVDID 200
Query: 154 DYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTS-LMNLYAKNGSVDDA 212
L ++I A ++L + +V +H VIK GF ++ +S L+++Y + A
Sbjct: 201 HVSLYNLIPAVSKL----EKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAA 253
Query: 213 KFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSML 272
+ VF+ + K SW T++ Y +G + L LF+ MR DV +K +S L A + +
Sbjct: 254 ESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYV 313
Query: 273 QFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLI 332
+ G IH + +++G+ DVSV LM YSKCG +++A +LF IE ++++SW+ +I
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 333 GGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIE 392
Y Q EA+ LF +M R KP+ +SVL C V A G+ +H Y+ KA+IE
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433
Query: 393 SDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEM 452
S+ +++ MYAKC + A K F+ + ++ V++NA+ +GY++ ++A D++ M
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493
Query: 453 RVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSN 512
++ V P T V +L + ++G IIK+G + ALI+ ++KC +
Sbjct: 494 KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDAL 553
Query: 513 KDARLVFDEMN-QRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITA 571
A ++FD+ ++ V WN M+ GY + EEA+ + ++ + + +PN TF ++ A
Sbjct: 554 AAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRA 613
Query: 572 ASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACW 631
A+ L +L+ G H+ LI+ G + + ++L+DMYAKCG +E + + F + K + W
Sbjct: 614 AAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSW 673
Query: 632 NSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAG 691
N+M+ A HG A+ LF M L+P+ ++F+ VLSAC HAGL+E+G F+ M
Sbjct: 674 NTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGE 733
Query: 692 -FGIEPGMEHYASVVSLLGR 710
IE +EHYA +V LLG+
Sbjct: 734 RHKIEAEVEHYACMVDLLGK 753
Score = 282 bits (721), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 190/645 (29%), Positives = 317/645 (49%), Gaps = 21/645 (3%)
Query: 59 LPDNFNN--------KRITCYKQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLF 110
+P N+ N K C QVH + +SGL+ N L+ YS D +R +F
Sbjct: 1 MPINYTNLLLMLRECKNFRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIF 56
Query: 111 DTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNG-RPDDYILSSVICACTQLGG 169
D++ + +V W+S++ YT+ G EAL F G++ G PD Y + + AC
Sbjct: 57 DSVRDPGVVLWNSMIRGYTRAGLHREALG-FFGYMSEEKGIDPDKYSFTFALKAC----A 111
Query: 170 GGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTT 229
G G ++H + + G + DVY+GT+L+ +Y K + A+ VFD + VK V+W T
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 230 IITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRG 289
+++G ++G S +L LF+ MR V D L +++ A S L+ + +H V+++G
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231
Query: 290 MGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFT 349
S + L+D Y C + A +F+E+ K+ SW T++ Y N F E ++LF
Sbjct: 232 FIFAFS--SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289
Query: 350 EMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCD 409
M + + A +S L + V L +G +H Y+ + + D V SL+ MY+KC
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCG 349
Query: 410 SLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLG 469
L A ++F + DR+VVS++AMI Y + + EA+ LF +M + P +T S+L
Sbjct: 350 ELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQ 409
Query: 470 LSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVV 529
+ V + K IH IK + ++ +A+I Y+KC A F+ + +D V
Sbjct: 410 GCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVA 469
Query: 530 WNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLI 589
+NA+ GYTQ + +A +Y + L P+ T ++ + G + +I
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII 529
Query: 590 KLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTW-KDVACWNSMICTNAHHGEPMKAL 648
K G D + + ALI+M+ KC +L A F + K WN M+ HG+ +A+
Sbjct: 530 KHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAV 589
Query: 649 LLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAGFG 693
FR+M +E +PN +TFV ++ A + + G+ S+ G
Sbjct: 590 ATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCG 634
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 349 bits (896), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 220/669 (32%), Positives = 337/669 (50%), Gaps = 80/669 (11%)
Query: 227 WTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVL 286
W ++I Y +G ++ L LF M D Y V AC + V G+ HA L
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 287 RRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMK 346
G +V V N L+ YS+C + AR++FDE+ V +++SW ++I Y + + A++
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 347 LFTEMTRS-GWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMY 405
+F+ MT G +PD+ +VL C S+ G+Q+H ++ + + + FV N LVDMY
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Query: 406 AKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMR------------ 453
AKC + EA VF M+ ++VVS+NAM+ GYS+ + +A+ LF +M+
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 454 ----------VGF-------------VPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKY 490
+G+ + P +T +S+L +SV +L K+IH IKY
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 491 GVFL-------DVFAGSALIDAYSKCFSNKDARLVFDEMN--QRDIVVWNAMLLGYTQQL 541
+ L + + LID Y+KC AR +FD ++ +RD+V W M+ GY+Q
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 542 ENEEAIKLYLELLLS--QQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLD-FDSF 598
+ +A++L E+ Q RPN FT + + A ++L +L+ G+Q H + ++ + F
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 599 ITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEG 658
+++ LIDMYAKCGS+ DA F + K+ W S++ HG +AL +F EM G
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 659 LEPNYITFVGVLSACSHAGLIEDGLDHFQSMAG-FGIEPGMEHYASVVSLLGRN------ 711
+ + +T + VL ACSH+G+I+ G+++F M FG+ PG EHYA +V LLGR
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 712 --------------VW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACN 746
VW VELG YAAE + GSYTLLSN +A
Sbjct: 635 LRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 694
Query: 747 SMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHI 806
W D ++R M G+ K G SW+E F DK+H A Y +L + + I
Sbjct: 695 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRI 754
Query: 807 KGVGYVPNT 815
K +GYVP T
Sbjct: 755 KDIGYVPET 763
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 160/516 (31%), Positives = 259/516 (50%), Gaps = 53/516 (10%)
Query: 68 ITCYKQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSM 127
+ C + HA ++G + F+ N L+ YS+ L ARK+FD MS ++VSW+S++
Sbjct: 143 VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIES 202
Query: 128 YTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKS 187
Y K G + AL +F RPD+ L +V+ C LG ++G+Q+H F + S
Sbjct: 203 YAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH----SLGKQLHCFAVTS 258
Query: 188 GFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTI----------------- 230
++++VG L+++YAK G +D+A VF + VK VSW +
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 231 ------------------ITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSML 272
I+GY + G +L + QM + + ++ L SVLS C+ +
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV 378
Query: 273 QFVGGGKQIHAHVL-------RRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVK-- 323
+ GK+IH + + + G G + VIN L+D Y+KC +V AR +FD + K
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER 438
Query: 324 NIISWTTLIGGYMQNSFDREAMKLFTEMTRSGW--KPDDFACSSVLTSCGSVEALEQGRQ 381
++++WT +IGGY Q+ +A++L +EM +P+ F S L +C S+ AL G+Q
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 382 VHAYSFKANIES-DNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEE 440
+HAY+ + + FV N L+DMYAKC S+++AR VFD M +N V++ +++ GY
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHG 558
Query: 441 KLSEALDLFHEM-RVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAG 499
EAL +F EM R+GF G+ V L S S + + + + +GV
Sbjct: 559 YGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHY 618
Query: 500 SALIDAYSKCFS-NKDARLVFDEMNQRDIVVWNAML 534
+ L+D + N RL+ + + VVW A L
Sbjct: 619 ACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFL 654
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 223/453 (49%), Gaps = 50/453 (11%)
Query: 279 KQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKN--IISWTTLIGGYM 336
K IH +L G+ + +++ + L+ Y G + A L + + W +LI Y
Sbjct: 45 KLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG 103
Query: 337 QNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNF 396
N + + LF M W PD++ V +CG + ++ G HA S S+ F
Sbjct: 104 DNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVF 163
Query: 397 VKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGF 456
V N+LV MY++C SL++ARKVFD M+ +VVS+N++IE Y+K K AL++F M F
Sbjct: 164 VGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF 223
Query: 457 -VPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDA 515
P +T V++L +S+ + KQ+H + + ++F G+ L+D Y+KC +A
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 516 RLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLY------------------------- 550
VF M+ +D+V WNAM+ GY+Q E+A++L+
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQR 343
Query: 551 ----------LELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDF----- 595
++L S +PNE T ++++ +++G+L HG++ H + IK +D
Sbjct: 344 GLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGH 403
Query: 596 --DSFITSALIDMYAKCGSLEDAYETFGSTTWK--DVACWNSMICTNAHHGEPMKALLLF 651
++ + + LIDMYAKC ++ A F S + K DV W MI + HG+ KAL L
Sbjct: 404 GDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELL 463
Query: 652 REMIIEGLE--PNYITFVGVLSACSHAGLIEDG 682
EM E + PN T L AC+ + G
Sbjct: 464 SEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 181/388 (46%), Gaps = 9/388 (2%)
Query: 374 EALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVM--ADRNVVSYNA 431
+ + Q + +H I + N + L+ Y L+ A + +D V +N+
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNLTSH-LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 432 MIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYG 491
+I Y ++ L LF M P TF + + S+ + H L + G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 492 VFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYL 551
+VF G+AL+ YS+C S DAR VFDEM+ D+V WN+++ Y + + + A++++
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 552 ELLLS-QQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKC 610
+ RP+ T ++ ++LG+ G+Q H + + + F+ + L+DMYAKC
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 611 GSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVL 670
G +++A F + + KDV WN+M+ + G A+ LF +M E ++ + +T+ +
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 671 SACSHAGLIEDGLDHFQSMAGFGIEPGMEHYASVVS---LLGRNVWNVELGRYAAEMAIS 727
S + GL + L + M GI+P SV+S +G + E+ YA + I
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 728 IDPMDSGSYTLLSNTFACNSMWADAKQV 755
+ G ++ N M+A K+V
Sbjct: 398 LRKNGHGDENMVINQLI--DMYAKCKKV 423
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 139/266 (52%), Gaps = 10/266 (3%)
Query: 64 NNKRITCYK-QVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMS--ERNLVS 120
+ K I CY + + +G + + N L+ Y+K +D AR +FD++S ER++V+
Sbjct: 383 HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 121 WSSLVSMYTKKGYGEEALMVFIG-FLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQ 179
W+ ++ Y++ G +AL + F + RP+ + +S + AC L +G+Q
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL----RIGKQ 498
Query: 180 MHSFVIKSGFDR-DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSG 238
+H++ +++ + ++V L+++YAK GS+ DA+ VFD +M K V+WT+++TGY G
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHG 558
Query: 239 RSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRR-GMGMDVSVI 297
+ +L +F++MR D L VL ACS + G + + G+
Sbjct: 559 YGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHY 618
Query: 298 NVLMDFYSKCGRVKMARRLFDEIEVK 323
L+D + GR+ A RL +E+ ++
Sbjct: 619 ACLVDLLGRAGRLNAALRLIEEMPME 644
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 348 bits (893), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 202/666 (30%), Positives = 335/666 (50%), Gaps = 34/666 (5%)
Query: 177 GEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVK 236
G +++S + S V +G + + ++ + G++ DA +VF + + SW ++ GY K
Sbjct: 113 GSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAK 172
Query: 237 SGRSDLSLNLFNQMRETD-VVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVS 295
G D ++ L+++M V D Y VL C + + GK++H HV+R G +D+
Sbjct: 173 QGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDID 232
Query: 296 VINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSG 355
V+N L+ Y KCG VK AR LFD + ++IISW +I GY +N E ++LF M
Sbjct: 233 VVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS 292
Query: 356 WKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEAR 415
PD +SV+++C + GR +HAY D V NSL MY S EA
Sbjct: 293 VDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAE 352
Query: 416 KVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVF 475
K+F M +++VS+ MI GY +A+D + M V P +T ++L +++
Sbjct: 353 KLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLG 412
Query: 476 SLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLL 535
L++ ++H L IK + V + LI+ YSKC A +F + +++++ W +++
Sbjct: 413 DLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIA 472
Query: 536 GYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDF 595
G EA+ ++ ++ Q PN T A + A + +G+L G++ H H+++ G+
Sbjct: 473 GLRLNNRCFEALIFLRQMKMTLQ-PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGL 531
Query: 596 DSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMI 655
D F+ +AL+DMY +CG + A+ F S KDV WN ++ + G+ + LF M+
Sbjct: 532 DDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMV 590
Query: 656 IEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLLGR----- 710
+ P+ ITF+ +L CS + ++ GL +F M +G+ P ++HYA VV LLGR
Sbjct: 591 KSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQ 650
Query: 711 ---------------NVW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFA 744
VW ++LG +A+ +D G Y LL N +A
Sbjct: 651 EAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYA 710
Query: 745 CNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLIL 804
W + +VR+ M +GL +AG SW+EV +VHAF++ DK H ++L+
Sbjct: 711 DCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYE 770
Query: 805 HIKGVG 810
+ VG
Sbjct: 771 KMSEVG 776
Score = 293 bits (749), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 170/555 (30%), Positives = 299/555 (53%), Gaps = 8/555 (1%)
Query: 89 LANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVG 148
L N L + + +L A +F MSERNL SW+ LV Y K+GY +EA+ ++ L VG
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 149 NGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGS 208
+PD Y V+ C GG G+++H V++ G++ D+ V +L+ +Y K G
Sbjct: 191 GVKPDVYTFPCVLRTC----GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246
Query: 209 VDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSA 268
V A+ +FD + + +SW +I+GY ++G L LF MR V D L+SV+SA
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 269 CSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISW 328
C +L G+ IHA+V+ G +D+SV N L Y G + A +LF +E K+I+SW
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSW 366
Query: 329 TTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFK 388
TT+I GY N +A+ + M + KPD+ ++VL++C ++ L+ G ++H + K
Sbjct: 367 TTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK 426
Query: 389 ANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDL 448
A + S V N+L++MY+KC + +A +F + +NV+S+ ++I G + EAL
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIF 486
Query: 449 FHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSK 508
+M++ + P +T + L + + +L K+IH +++ GV LD F +AL+D Y +
Sbjct: 487 LRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVR 545
Query: 509 CFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAAL 568
C A F+ ++D+ WN +L GY+++ + ++L+ ++ S+ RP+E TF +L
Sbjct: 546 CGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL 604
Query: 569 ITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGS-TTWKD 627
+ S ++ G + + + G+ + + ++D+ + G L++A++ D
Sbjct: 605 LCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPD 664
Query: 628 VACWNSMI-CTNAHH 641
A W +++ HH
Sbjct: 665 PAVWGALLNACRIHH 679
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 219/431 (50%), Gaps = 2/431 (0%)
Query: 233 GYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGM 292
G +G+ + ++ L N M+E V D+ + +++ C + G ++++ L +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 293 DVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMT 352
V + N + + + G + A +F ++ +N+ SW L+GGY + + EAM L+ M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 353 R-SGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSL 411
G KPD + VL +CG + L +G++VH + + E D V N+L+ MY KC +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 412 TEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLS 471
AR +FD M R+++S+NAMI GY + E L+LF MR V P L+T S++
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 472 SSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWN 531
+ + IH +I G +D+ ++L Y S ++A +F M ++DIV W
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367
Query: 532 AMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKL 591
M+ GY ++AI Y + +P+E T AA+++A + LG L G + H IK
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 592 GLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLF 651
L + + LI+MY+KC ++ A + F + K+V W S+I + +AL+
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFL 487
Query: 652 REMIIEGLEPN 662
R+M + L+PN
Sbjct: 488 RQMKMT-LQPN 497
Score = 215 bits (548), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 243/464 (52%), Gaps = 8/464 (1%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
K+VH + G + D + N L+ Y K D+ AR LFD M R+++SW++++S Y +
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
G E L +F ++ + PD L+SVI AC LG +G +H++VI +GF
Sbjct: 276 GMCHEGLELFFA-MRGLSVDPDLMTLTSVISACELLG----DRRLGRDIHAYVITTGFAV 330
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
D+ V SL +Y GS +A+ +F + K VSWTT+I+GY + D +++ + M
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
+ V D+ +++VLSAC+ L + G ++H ++ + V V N L++ YSKC +
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCG 371
A +F I KN+ISWT++I G N+ EA+ +F + +P+ ++ L +C
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACA 509
Query: 372 SVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNA 431
+ AL G+++HA+ + + D+F+ N+L+DMY +C + A F+ ++V S+N
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNI 568
Query: 432 MIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYG 491
++ GYS+ + S ++LF M V P +TF+SLL S + + YG
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYG 628
Query: 492 VFLDVFAGSALIDAYSKCFSNKDARLVFDEMN-QRDIVVWNAML 534
V ++ + ++D + ++A +M D VW A+L
Sbjct: 629 VTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 183/352 (51%), Gaps = 1/352 (0%)
Query: 334 GYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIES 393
G N EAMKL M D+ +++ C A E+G +V++ + +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 394 DNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMR 453
+ N+ + M+ + +L +A VF M++RN+ S+N ++ GY+K+ EA+ L+H M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 454 -VGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSN 512
VG V P + TF +L + L K++H +++YG LD+ +ALI Y KC
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 513 KDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAA 572
K ARL+FD M +RDI+ WNAM+ GY + E ++L+ + P+ T ++I+A
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 573 SNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWN 632
LG + G+ H ++I G D + ++L MY GS +A + F KD+ W
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367
Query: 633 SMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLD 684
+MI ++ P KA+ +R M + ++P+ IT VLSAC+ G ++ G++
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 68 ITCYKQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSM 127
+ C K++HA + +G+ D FL N LL Y + ++ A F++ ++++ SW+ L++
Sbjct: 514 LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTG 572
Query: 128 YTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQ 166
Y+++G G + +F +K RPD+ S++C C++
Sbjct: 573 YSERGQGSMVVELFDRMVK-SRVRPDEITFISLLCGCSK 610
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 345 bits (885), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 196/593 (33%), Positives = 316/593 (53%), Gaps = 37/593 (6%)
Query: 258 DKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLF 317
D + S + SA Q KQIHA +L G+ +I L+ S G + AR++F
Sbjct: 21 DSFYASLIDSATHKAQL----KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 318 DEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALE 377
D++ I W +I GY +N+ ++A+ +++ M + PD F +L +C + L+
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 378 QGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFD--VMADRNVVSYNAMIEG 435
GR VHA F+ ++D FV+N L+ +YAKC L AR VF+ + +R +VS+ A++
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 436 YSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLD 495
Y++ + EAL++F +MR V P + VS+L + + L+ + IH ++K G+ ++
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 496 VFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLL 555
+L Y+KC A+++FD+M ++++WNAM+ GY + EAI ++ E++
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 556 SQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLED 615
RP+ + + I+A + +GSL+ + + ++ + D FI+SALIDM+AKCGS+E
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 616 AYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSH 675
A F T +DV W++MI HG +A+ L+R M G+ PN +TF+G+L AC+H
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Query: 676 AGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLLGR--------------------NVW-- 713
+G++ +G F MA I P +HYA V+ LLGR VW
Sbjct: 437 SGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496
Query: 714 ---------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGL 764
+VELG YAA+ SIDP ++G Y LSN +A +W +VR +M GL
Sbjct: 497 LLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGL 556
Query: 765 MKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIKGVGYVPNTSA 817
K+ G SW+EV + AF DKSH + ++ + +K G+V N A
Sbjct: 557 NKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDA 609
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 237/399 (59%), Gaps = 7/399 (1%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
KQ+HA++ + GLQ FL L+ S D+ AR++FD + + W++++ Y++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
+ ++AL+++ +++ PD + ++ AC+ G +G +H+ V + GFD
Sbjct: 98 NHFQDALLMYSN-MQLARVSPDSFTFPHLLKACS----GLSHLQMGRFVHAQVFRLGFDA 152
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMV--KTAVSWTTIITGYVKSGRSDLSLNLFNQ 249
DV+V L+ LYAK + A+ VF+GL + +T VSWT I++ Y ++G +L +F+Q
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 250 MRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGR 309
MR+ DV D L SVL+A + LQ + G+ IHA V++ G+ ++ ++ L Y+KCG+
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 310 VKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTS 369
V A+ LFD+++ N+I W +I GY +N + REA+ +F EM +PD + +S +++
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 370 CGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSY 429
C V +LEQ R ++ Y +++ D F+ ++L+DM+AKC S+ AR VFD DR+VV +
Sbjct: 333 CAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVW 392
Query: 430 NAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLL 468
+AMI GY + EA+ L+ M G V P +TF+ LL
Sbjct: 393 SAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 185/372 (49%), Gaps = 8/372 (2%)
Query: 74 VHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFD--TMSERNLVSWSSLVSMYTKK 131
VHAQ+ G D F+ N L+ Y+K L AR +F+ + ER +VSW+++VS Y +
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 200
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
G EAL +F K+ + +PD L SV+ A T L G +H+ V+K G +
Sbjct: 201 GEPMEALEIFSQMRKM-DVKPDWVALVSVLNAFTCL----QDLKQGRSIHASVVKMGLEI 255
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
+ + SL +YAK G V AK +FD + + W +I+GY K+G + ++++F++M
Sbjct: 256 EPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMI 315
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
DV D ++S +SAC+ + + + ++ +V R DV + + L+D ++KCG V+
Sbjct: 316 NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVE 375
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCG 371
AR +FD ++++ W+ +I GY + REA+ L+ M R G P+D +L +C
Sbjct: 376 GARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN 435
Query: 372 SVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMA-DRNVVSYN 430
+ +G I ++D+ + L +A +V M V +
Sbjct: 436 HSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWG 495
Query: 431 AMIEGYSKEEKL 442
A++ K +
Sbjct: 496 ALLSACKKHRHV 507
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/631 (30%), Positives = 331/631 (52%), Gaps = 36/631 (5%)
Query: 178 EQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKS 237
Q H + +G D+ + T L++LY G DA+ VFD + W ++ Y +
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 238 GRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVI 297
S + L++ + + +D + S L AC+ LQ + GK+IH +++ D V+
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVL 179
Query: 298 NVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWK 357
L+D Y+KCG +K A ++F++I ++N++ WT++I GY++N E + LF M +
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 358 PDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKV 417
+++ +++ +C + AL QG+ H K+ IE + + SL+DMY KC ++ AR+V
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 418 FDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSL 477
F+ + ++V + AMI GY+ ++EAL LF +M+ + P +T S+L + +L
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359
Query: 478 ESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGY 537
E + +HGL IK G++ D +AL+ Y+KC+ N+DA+ VF+ +++DIV WN+++ G+
Sbjct: 360 ELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGF 418
Query: 538 TQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDS 597
+Q EA+ L+ + PN T A+L +A ++LGSL G H + +KLG S
Sbjct: 419 SQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASS 478
Query: 598 --FITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMI 655
+ +AL+D YAKCG + A F + K+ W++MI G+ + +L LF EM+
Sbjct: 479 SVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEML 538
Query: 656 IEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSM-AGFGIEPGMEHYASVVSLLGR---- 710
+ +PN TF +LSAC H G++ +G +F SM + P +HY +V +L R
Sbjct: 539 KKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGEL 598
Query: 711 -NVWNV--------------------------ELGRYAAEMAISIDPMDSGSYTLLSNTF 743
++ +LG + + + P D+ Y L+SN +
Sbjct: 599 EQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLY 658
Query: 744 ACNSMWADAKQVRKKMDLDGLMKEAGRSWIE 774
A + W AK+VR M GL K AG S +E
Sbjct: 659 ASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 315 bits (808), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 193/597 (32%), Positives = 326/597 (54%), Gaps = 26/597 (4%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
+Q H + +GL D +A L+ Y AR +FD + E + W ++ Y
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIK-SGFD 190
E + ++ +K G R DD + S + ACT+L D N G+++H ++K FD
Sbjct: 121 KESVEVVKLYDLLMKHGF-RYDDIVFSKALKACTELQ---DLDN-GKKIHCQLVKVPSFD 175
Query: 191 RDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQM 250
V G L+++YAK G + A VF+ + ++ V WT++I GYVK+ + L LFN+M
Sbjct: 176 NVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM 233
Query: 251 RETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRV 310
RE +V+ ++Y +++ AC+ L + GK H +++ G+ + ++ L+D Y KCG +
Sbjct: 234 RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDI 293
Query: 311 KMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSC 370
ARR+F+E +++ WT +I GY N EA+ LF +M KP+ +SVL+ C
Sbjct: 294 SNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
Query: 371 GSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYN 430
G +E LE GR VH S K I N V N+LV MYAKC +A+ VF++ +++++V++N
Sbjct: 354 GLIENLELGRSVHGLSIKVGIWDTN-VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWN 412
Query: 431 AMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKY 490
++I G+S+ + EAL LFH M V P +T SL +S+ SL +H +K
Sbjct: 413 SIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKL 472
Query: 491 GVFL--DVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIK 548
G V G+AL+D Y+KC + ARL+FD + +++ + W+AM+ GY +Q + +++
Sbjct: 473 GFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLE 532
Query: 549 LYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITS-----AL 603
L+ E+L QQ+PNE TF ++++A + G + G+++ + + K D++ F S +
Sbjct: 533 LFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYK---DYN-FTPSTKHYTCM 588
Query: 604 IDMYAKCGSLEDAYETFGSTTWK-DVACWNSMICTNAHHGEPMKALLLFREMIIEGL 659
+DM A+ G LE A + + DV C+ + + HG M + E++I+ +
Sbjct: 589 VDMLARAGELEQALDIIEKMPIQPDVRCFGAFL-----HGCGMHSRFDLGEIVIKKM 640
Score = 155 bits (393), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 176/337 (52%), Gaps = 10/337 (2%)
Query: 363 CSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMA 422
C +L+ C ++++L RQ H + D + LV +Y +AR VFD +
Sbjct: 47 CFLLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIP 103
Query: 423 DRNVVSYNAMIEGYSKEEKLSEALDLFHE-MRVGFVPPGLLTFVSLLGLSSSVFSLESSK 481
+ + + M+ Y ++ E + L+ M+ GF ++ F L + + L++ K
Sbjct: 104 EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIV-FSKALKACTELQDLDNGK 162
Query: 482 QIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQL 541
+IH ++K F +V + L+D Y+KC K A VF+++ R++V W +M+ GY +
Sbjct: 163 KIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKND 221
Query: 542 ENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITS 601
EE + L+ + + NE+T+ LI A + L +L G+ FH L+K G++ S + +
Sbjct: 222 LCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT 281
Query: 602 ALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEP 661
+L+DMY KCG + +A F + D+ W +MI H+G +AL LF++M ++P
Sbjct: 282 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341
Query: 662 NYITFVGVLSACSHAGLIEDGLDHFQSMAGFGIEPGM 698
N +T VLS C GLIE+ L+ +S+ G I+ G+
Sbjct: 342 NCVTIASVLSGC---GLIEN-LELGRSVHGLSIKVGI 374
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 342 bits (877), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 200/592 (33%), Positives = 310/592 (52%), Gaps = 36/592 (6%)
Query: 262 LSSVLSACSMLQFVGGGKQIHAHVL---RRGMGMDVSVINVLMDFYSKCGRVKMARRLFD 318
L+ +L C+ ++ G+ IHAH++ + D IN L++ Y KC AR+LFD
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 319 EIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGW-KPDDFACSSVLTSCGSVEALE 377
+ +N++SW ++ GY + FD E +KLF M SG +P++F + V SC + +E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 378 QGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYS 437
+G+Q H K + S FV+N+LV MY+ C EA +V D + ++ +++ + GY
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 438 KEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVF 497
+ E LD+ + LT++S L L S++ L + Q+H ++++G +V
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 498 AGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQ 557
A ALI+ Y KC A+ VFD+ + ++I + ++ Y Q EEA+ L+ ++ +
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 558 QRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAY 617
PNE+TFA L+ + + L LK G H ++K G + +AL++MYAK GS+EDA
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 618 ETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAG 677
+ F T++D+ WN+MI +HHG +AL F MI G PN ITF+GVL ACSH G
Sbjct: 394 KAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG 453
Query: 678 LIEDGLDHF-QSMAGFGIEPGMEHYASVVSLLGRN--------------------VW--- 713
+E GL +F Q M F ++P ++HY +V LL + W
Sbjct: 454 FVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTL 513
Query: 714 --------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLM 765
N LG+ AE AI P DSG Y LLSN A + W +VR M+ G+
Sbjct: 514 LNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVK 573
Query: 766 KEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIKGVGYVPNTSA 817
KE G SWI + N+ H F+A D H L Y+ + ++ IK +GY P+ +
Sbjct: 574 KEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAG 625
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 228/468 (48%), Gaps = 9/468 (1%)
Query: 72 KQVHAQIAISGLQC---DTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMY 128
+ +HA + ++ D + N L+ Y K + ARKLFD M ERN+VSW +++ Y
Sbjct: 51 ESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGY 110
Query: 129 TKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSG 188
G+ E L +F G RP++++ + V +C+ G + G+Q H +K G
Sbjct: 111 QNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE----GKQFHGCFLKYG 166
Query: 189 FDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFN 248
+V +L+ +Y+ +A V D L +++ ++GY++ G L++
Sbjct: 167 LISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLR 226
Query: 249 QMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCG 308
+ D V + S L S L+ + Q+H+ ++R G +V L++ Y KCG
Sbjct: 227 KTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCG 286
Query: 309 RVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLT 368
+V A+R+FD+ +NI TT++ Y Q+ EA+ LF++M P+++ + +L
Sbjct: 287 KVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLN 346
Query: 369 SCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVS 428
S + L+QG +H K+ + V N+LV+MYAK S+ +ARK F M R++V+
Sbjct: 347 SIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVT 406
Query: 429 YNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSV-FSLESSKQIHGLI 487
+N MI G S EAL+ F M P +TF+ +L S + F + + L+
Sbjct: 407 WNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLM 466
Query: 488 IKYGVFLDVFAGSALIDAYSKCFSNKDAR-LVFDEMNQRDIVVWNAML 534
K+ V D+ + ++ SK KDA + + D+V W +L
Sbjct: 467 KKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 234/472 (49%), Gaps = 18/472 (3%)
Query: 176 VGEQMHSFVI---KSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIIT 232
+GE +H+ +I +S D Y SL+NLY K A+ +FD + + VSW ++
Sbjct: 49 IGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMK 108
Query: 233 GYVKSGRSDLSLNLFNQMRET-DVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMG 291
GY SG L LF M + + ++++ + V +CS + GKQ H L+ G+
Sbjct: 109 GYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLI 168
Query: 292 MDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEM 351
V N L+ YS C A R+ D++ ++ +++ + GY++ +E + + +
Sbjct: 169 SHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKT 228
Query: 352 TRSGWKPDDFACSSVLTSCGSVEALEQGRQVHA----YSFKANIESDNFVKNSLVDMYAK 407
+ ++ S L ++ L QVH+ + F A +E+ +L++MY K
Sbjct: 229 ANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEA----CGALINMYGK 284
Query: 408 CDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSL 467
C + A++VFD +N+ +++ Y +++ EAL+LF +M VPP TF L
Sbjct: 285 CGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAIL 344
Query: 468 LGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDI 527
L + + L+ +HGL++K G V G+AL++ Y+K S +DAR F M RDI
Sbjct: 345 LNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDI 404
Query: 528 VVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNH 587
V WN M+ G + EA++ + ++ + + PN TF ++ A S++G ++ G + N
Sbjct: 405 VTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQ 464
Query: 588 LI-KLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTT---WKDVACWNSMI 635
L+ K + D + ++ + +K G +DA E F T W DV W +++
Sbjct: 465 LMKKFDVQPDIQHYTCIVGLLSKAGMFKDA-EDFMRTAPIEW-DVVAWRTLL 514
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 160/317 (50%), Gaps = 7/317 (2%)
Query: 64 NNKRITCYKQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSS 123
N+ RI KQ H GL F+ N L+ YS + A ++ D + +L +SS
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSS 207
Query: 124 LVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVI-CACTQLGGGGDGGNVGEQMHS 182
+S Y + G +E L V K N +D++ +++ + +L N+ Q+HS
Sbjct: 208 ALSGYLECGAFKEGLDVL---RKTAN---EDFVWNNLTYLSSLRLFSNLRDLNLALQVHS 261
Query: 183 FVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDL 242
+++ GF+ +V +L+N+Y K G V A+ VFD + TTI+ Y + +
Sbjct: 262 RMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEE 321
Query: 243 SLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMD 302
+LNLF++M +V ++Y + +L++ + L + G +H VL+ G V V N L++
Sbjct: 322 ALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVN 381
Query: 303 FYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFA 362
Y+K G ++ AR+ F + ++I++W T+I G + REA++ F M +G P+
Sbjct: 382 MYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRIT 441
Query: 363 CSSVLTSCGSVEALEQG 379
VL +C + +EQG
Sbjct: 442 FIGVLQACSHIGFVEQG 458
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 342 bits (877), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 205/589 (34%), Positives = 307/589 (52%), Gaps = 39/589 (6%)
Query: 261 LLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVI-NVLMDFYSKCGRVKMARRLFDE 319
LL + +SA SM G+ +HA +++ + N L++ YSK + AR +
Sbjct: 12 LLKNAISASSMRL----GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 320 IEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQG 379
+N++SWT+LI G QN A+ F EM R G P+DF + S+ G
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 380 RQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKE 439
+Q+HA + K D FV S DMY K +ARK+FD + +RN+ ++NA I +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 440 EKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAG 499
+ EA++ F E R P +TF + L S L Q+HGL+++ G DV
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 247
Query: 500 SALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQR 559
+ LID Y KC + + ++F EM ++ V W +++ Y Q E+E+A LYL
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 307
Query: 560 PNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYET 619
++F +++++A + + L+ G+ H H +K ++ F+ SAL+DMY KCG +ED+ +
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 620 FGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGL--EPNYITFVGVLSACSHAG 677
F K++ NS+I AH G+ AL LF EM G PNY+TFV +LSACS AG
Sbjct: 368 FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 427
Query: 678 LIEDGLDHFQSM-AGFGIEPGMEHYASVVSLLGR--------------------NVWNV- 715
+E+G+ F SM + +GIEPG EHY+ +V +LGR +VW
Sbjct: 428 AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Query: 716 ----------ELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLM 765
+LG AAE +DP DSG++ LLSNTFA WA+A VR+++ G+
Sbjct: 488 QNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIK 547
Query: 766 KEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIKGVGYVPN 814
K AG SWI V N+VHAF A+D+SH + L L ++ GY P+
Sbjct: 548 KGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPD 596
Score = 244 bits (622), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 242/467 (51%), Gaps = 10/467 (2%)
Query: 72 KQVHAQIAIS-GLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTK 130
+ VHA+I + FLAN L+ YSK + + AR + RN+VSW+SL+S +
Sbjct: 26 RVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQ 85
Query: 131 KGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFD 190
G+ AL+ F + G P+D+ A L G+Q+H+ +K G
Sbjct: 86 NGHFSTALVEFFEMRREGV-VPNDFTFPCAFKAVASL----RLPVTGKQIHALAVKCGRI 140
Query: 191 RDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQM 250
DV+VG S ++Y K DDA+ +FD + + +W I+ V GR ++ F +
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 200
Query: 251 RETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRV 310
R D + + L+ACS + G Q+H VLR G DVSV N L+DFY KC ++
Sbjct: 201 RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Query: 311 KMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSC 370
+ + +F E+ KN +SW +L+ Y+QN D +A L+ + + DF SSVL++C
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320
Query: 371 GSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYN 430
+ LE GR +HA++ KA +E FV ++LVDMY KC + ++ + FD M ++N+V+ N
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 380
Query: 431 AMIEGYSKEEKLSEALDLFHEMRV-GFVP-PGLLTFVSLLGLSSSVFSLESSKQI-HGLI 487
++I GY+ + ++ AL LF EM G P P +TFVSLL S ++E+ +I +
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
Query: 488 IKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMN-QRDIVVWNAM 533
YG+ S ++D + + A +M Q I VW A+
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 252/531 (47%), Gaps = 14/531 (2%)
Query: 176 VGEQMHSFVIKS-GFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGY 234
+G +H+ ++K+ ++ L+N+Y+K + A+ V + VSWT++I+G
Sbjct: 24 LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83
Query: 235 VKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDV 294
++G +L F +MR VV + + A + L+ GKQIHA ++ G +DV
Sbjct: 84 AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 295 SVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRS 354
V D Y K AR+LFDEI +N+ +W I + + REA++ F E R
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 355 GWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEA 414
P+ + L +C L G Q+H ++ ++D V N L+D Y KC + +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 415 RKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSV 474
+F M +N VS+ +++ Y + + +A L+ R V S+L + +
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGM 323
Query: 475 FSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAML 534
LE + IH +K V +F GSAL+D Y KC +D+ FDEM ++++V N+++
Sbjct: 324 AGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLI 383
Query: 535 LGYTQQLENEEAIKLYLELLL--SQQRPNEFTFAALITAASNLGSLKHGQQ-FHNHLIKL 591
GY Q + + A+ L+ E+ PN TF +L++A S G++++G + F +
Sbjct: 384 GGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTY 443
Query: 592 GLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKD-VACWNSMICTNAHHGEPMKALLL 650
G++ + S ++DM + G +E AYE + ++ W ++ HG+P LL
Sbjct: 444 GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLA 503
Query: 651 FREMIIEGLEP----NYITFVGVLSACSHAGLIEDGLDHFQSMAGFGIEPG 697
+ L+P N++ +A AG + + + G GI+ G
Sbjct: 504 AENLF--KLDPKDSGNHVLLSNTFAA---AGRWAEANTVREELKGVGIKKG 549
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/564 (32%), Positives = 308/564 (54%), Gaps = 36/564 (6%)
Query: 262 LSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIE 321
L S+L C+ G Q+H ++L+ G G+++ N L+D Y KC MA ++FD +
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 322 VKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQ 381
+N++SW+ L+ G++ N + ++ LF+EM R G P++F S+ L +CG + ALE+G Q
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 382 VHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEK 441
+H + K E V NSLVDMY+KC + EA KVF + DR+++S+NAMI G+
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 442 LSEALDLFHEMRVGFVP--PGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFA- 498
S+ALD F M+ + P T SLL SS + + KQIHG +++ G A
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 499 -GSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQ 557
+L+D Y KC AR FD++ ++ ++ W++++LGY Q+ E EA+ L+ L
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 558 QRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAY 617
+ + F +++I ++ L+ G+Q +KL ++ + ++++DMY KCG +++A
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 618 ETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAG 677
+ F KDV W +I HG K++ +F EM+ +EP+ + ++ VLSACSH+G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 678 LIEDGLDHFQS-MAGFGIEPGMEHYASVVSLLGR--------------------NVW--- 713
+I++G + F + GI+P +EHYA VV LLGR +W
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488
Query: 714 --------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLM 765
++ELG+ ++ + ID + +Y ++SN + W + R+ ++ GL
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 548
Query: 766 KEAGRSWIEVNNEVHAFVARDKSH 789
KEAG SW+E+ EVH F + + SH
Sbjct: 549 KEAGMSWVEIEREVHFFRSGEDSH 572
Score = 243 bits (620), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 264/493 (53%), Gaps = 10/493 (2%)
Query: 157 LSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVF 216
L S++ CT+ G GG Q+H +++KSG ++ L+++Y K A VF
Sbjct: 9 LVSILRVCTRKGLSDQGG----QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64
Query: 217 DGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVG 276
D + + VSW+ +++G+V +G SL+LF++M + +++ S+ L AC +L +
Sbjct: 65 DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALE 124
Query: 277 GGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYM 336
G QIH L+ G M V V N L+D YSKCGR+ A ++F I +++ISW +I G++
Sbjct: 125 KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFV 184
Query: 337 QNSFDREAMKLFTEMTRSGWK--PDDFACSSVLTSCGSVEALEQGRQVHAYSFKA--NIE 392
+ +A+ F M + K PD+F +S+L +C S + G+Q+H + ++ +
Sbjct: 185 HAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244
Query: 393 SDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEM 452
S + SLVD+Y KC L ARK FD + ++ ++S++++I GY++E + EA+ LF +
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 453 RVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSN 512
+ S++G+ + L KQ+ L +K L+ ++++D Y KC
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364
Query: 513 KDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAA 572
+A F EM +D++ W ++ GY + +++++++ E+L P+E + A+++A
Sbjct: 365 DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424
Query: 573 SNLGSLKHGQQFHNHLIKL-GLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWK-DVAC 630
S+ G +K G++ + L++ G+ + ++D+ + G L++A + K +V
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484
Query: 631 WNSMICTNAHHGE 643
W +++ HG+
Sbjct: 485 WQTLLSLCRVHGD 497
Score = 231 bits (588), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 252/468 (53%), Gaps = 11/468 (2%)
Query: 73 QVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKG 132
QVH + SG + +N L+ Y K + A K+FD+M ERN+VSWS+L+S + G
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 133 YGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRD 192
+ +L +F + G P+++ S+ + AC L + G Q+H F +K GF+
Sbjct: 87 DLKGSLSLFSEMGRQGI-YPNEFTFSTNLKACGLL----NALEKGLQIHGFCLKIGFEMM 141
Query: 193 VYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRE 252
V VG SL+++Y+K G +++A+ VF ++ ++ +SW +I G+V +G +L+ F M+E
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQE 201
Query: 253 TDVVH--DKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVS--VINVLMDFYSKCG 308
++ D++ L+S+L ACS + GKQIH ++R G S + L+D Y KCG
Sbjct: 202 ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261
Query: 309 RVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLT 368
+ AR+ FD+I+ K +ISW++LI GY Q EAM LF + + D FA SS++
Sbjct: 262 YLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIG 321
Query: 369 SCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVS 428
L QG+Q+ A + K + V NS+VDMY KC + EA K F M ++V+S
Sbjct: 322 VFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS 381
Query: 429 YNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLL-GLSSSVFSLESSKQIHGLI 487
+ +I GY K +++ +F+EM + P + ++++L S S E + L+
Sbjct: 382 WTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL 441
Query: 488 IKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMN-QRDIVVWNAML 534
+G+ V + ++D + K+A+ + D M + ++ +W +L
Sbjct: 442 ETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 7/256 (2%)
Query: 456 FVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDA 515
+P VS+L + + + Q+H ++K G L++ + LID Y KC A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 516 RLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNL 575
VFD M +R++V W+A++ G+ + + ++ L+ E+ PNEFTF+ + A L
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 576 GSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMI 635
+L+ G Q H +K+G + + ++L+DMY+KCG + +A + F + + WN+MI
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 636 CTNAHHGEPMKALLLFREMIIEGLE--PNYITFVGVLSACSHAGLIEDGLDHFQSMAGFG 693
H G KAL F M ++ P+ T +L ACS G+I G + + GF
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG----KQIHGFL 236
Query: 694 IEPGMEHYASVVSLLG 709
+ G H S ++ G
Sbjct: 237 VRSGF-HCPSSATITG 251
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 341 bits (874), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 191/638 (29%), Positives = 344/638 (53%), Gaps = 38/638 (5%)
Query: 197 TSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVV 256
T + +A + ++DA +FD + A W +I G+ G ++ +++M V
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 257 HDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRL 316
D + V+ + + + + GK+IHA V++ G DV V N L+ Y K G A ++
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 317 FDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEAL 376
F+E+ ++I+SW ++I GY+ ++ LF EM + G+KPD F+ S L +C V +
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 377 EQGRQVHAYSFKANIES-DNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEG 435
+ G+++H ++ ++ IE+ D V S++DMY+K ++ A ++F+ M RN+V++N MI
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGC 307
Query: 436 YSKEEKLSEALDLFHEM-RVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFL 494
Y++ ++++A F +M + P ++T ++LL S+ + + IHG ++ G
Sbjct: 308 YARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLP 363
Query: 495 DVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELL 554
+ +ALID Y +C K A ++FD M +++++ WN+++ Y Q +N A++L+ EL
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 555 LSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLE 614
S P+ T A+++ A + SL G++ H +++K ++ I ++L+ MYA CG LE
Sbjct: 424 DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLE 483
Query: 615 DAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACS 674
DA + F KDV WNS+I A HG ++ LF EMI + PN TF +L+ACS
Sbjct: 484 DARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACS 543
Query: 675 HAGLIEDGLDHFQSMA-GFGIEPGMEHYASVVSLLGRN--------------------VW 713
+G++++G ++F+SM +GI+PG+EHY ++ L+GR +W
Sbjct: 544 ISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIW 603
Query: 714 -----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLD 762
++ + +AAE ++ ++G Y LL N +A W D +++ M+
Sbjct: 604 GSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESK 663
Query: 763 GLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILD 800
G+ + + RS +E + H F D+SH A + Y +LD
Sbjct: 664 GISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLD 701
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/597 (29%), Positives = 304/597 (50%), Gaps = 24/597 (4%)
Query: 94 LRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEAL-----MVFIGFLKVG 148
LR ++ + ++ A +LFD M++ + W+ ++ +T G EA+ MVF G
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV---- 126
Query: 149 NGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGS 208
+ D + VI + G G+++H+ VIK GF DVYV SL++LY K G
Sbjct: 127 --KADTFTYPFVIKSV----AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC 180
Query: 209 VDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSA 268
DA+ VF+ + + VSW ++I+GY+ G SL LF +M + D++ S L A
Sbjct: 181 AWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGA 240
Query: 269 CSMLQFVGGGKQIHAHVLR-RGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIIS 327
CS + GK+IH H +R R DV V+ ++D YSK G V A R+F+ + +NI++
Sbjct: 241 CSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVA 300
Query: 328 WTTLIGGYMQNSFDREAMKLFTEMT-RSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYS 386
W +IG Y +N +A F +M+ ++G +PD ++L + A+ +GR +H Y+
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYA 356
Query: 387 FKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEAL 446
+ ++ +L+DMY +C L A +FD MA++NV+S+N++I Y + K AL
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 447 DLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAY 506
+LF E+ + P T S+L + SL ++IH I+K + + ++L+ Y
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 476
Query: 507 SKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFA 566
+ C +DAR F+ + +D+V WN++++ Y ++ L+ E++ S+ PN+ TFA
Sbjct: 477 AMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFA 536
Query: 567 ALITAASNLGSLKHGQQFHNHLIK-LGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTW 625
+L+ A S G + G ++ + + G+D ++D+ + G+ A +
Sbjct: 537 SLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPF 596
Query: 626 KDVA-CWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIED 681
A W S++ + +H + A E I + N +V +L+ + AG ED
Sbjct: 597 VPTARIWGSLLNASRNHKDITIAEFA-AEQIFKMEHDNTGCYVLLLNMYAEAGRWED 652
Score = 229 bits (583), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 143/439 (32%), Positives = 239/439 (54%), Gaps = 21/439 (4%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
K++HA + G D ++ N L+ Y K A K+F+ M ER++VSW+S++S Y
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
G G +LM+F LK G +PD + S + AC+ + +G+++H ++S +
Sbjct: 210 GDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHV----YSPKMGKEIHCHAVRSRIET 264
Query: 192 -DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQM 250
DV V TS++++Y+K G V A+ +F+G++ + V+W +I Y ++GR + F +M
Sbjct: 265 GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM 324
Query: 251 RETDVVHDKYLLS-SVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGR 309
E + + + S ++L A ++L+ G+ IH + +RRG + + L+D Y +CG+
Sbjct: 325 SEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQ 380
Query: 310 VKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTS 369
+K A +FD + KN+ISW ++I Y+QN + A++LF E+ S PD +S+L +
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPA 440
Query: 370 CGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSY 429
+L +GR++HAY K+ S+ + NSLV MYA C L +ARK F+ + ++VVS+
Sbjct: 441 YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSW 500
Query: 430 NAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSS-------SVFSLESSKQ 482
N++I Y+ ++ LF EM V P TF SLL S ES K+
Sbjct: 501 NSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKR 560
Query: 483 IHGL---IIKYGVFLDVFA 498
+G+ I YG LD+
Sbjct: 561 EYGIDPGIEHYGCMLDLIG 579
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 189/353 (53%), Gaps = 12/353 (3%)
Query: 72 KQVHAQIAISGLQC-DTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTK 130
K++H S ++ D + +L YSK ++ A ++F+ M +RN+V+W+ ++ Y +
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 131 KGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFD 190
G +A + F + +PD +++ A L G +H + ++ GF
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEG--------RTIHGYAMRRGFL 362
Query: 191 RDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQM 250
+ + T+L+++Y + G + A+ +FD + K +SW +II YV++G++ +L LF ++
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Query: 251 RETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRV 310
++ +V D ++S+L A + + G++IHA++++ + ++N L+ Y+ CG +
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 311 KMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSC 370
+ AR+ F+ I +K+++SW ++I Y + F R ++ LF+EM S P+ +S+L +C
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 371 GSVEALEQGRQVHAYSFKANIESDNFVKN--SLVDMYAKCDSLTEARKVFDVM 421
+++G + + S K D +++ ++D+ + + + A++ + M
Sbjct: 543 SISGMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 339 bits (870), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 209/739 (28%), Positives = 377/739 (51%), Gaps = 41/739 (5%)
Query: 91 NMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSM--YTKKGYGEEALMVFIGFLKVG 148
N L+ Y + + L+ ARK+FD M +RN+V+ L ++ Y G + ++ +G ++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 149 NGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGF---DRDVYVGTSLMNLYAK 205
P + I SSV+ T+ Q+H+ V+ +G Y +L+++Y +
Sbjct: 86 FFMPLNEIASSVV-ELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 206 NGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGR-SDLSLNLFNQMRETDVVHDKYLLSS 264
GS++ A+ VFD + + VS+ + + Y ++ + + L M V + +S
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 265 VLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKN 324
++ C++L+ V G +++ +++ G +V V ++ YS CG ++ ARR+FD + ++
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRD 264
Query: 325 IISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHA 384
++W T+I G ++N + + F M SG P F S VL C + + G+ +HA
Sbjct: 265 AVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHA 324
Query: 385 YSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSE 444
++ +D + N+L+DMY C + EA VF + + N+VS+N++I G S+ +
Sbjct: 325 RIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQ 384
Query: 445 ALDLFHEM-RVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALI 503
A+ ++ + R+ P TF + + ++ K +HG + K G VF G+ L+
Sbjct: 385 AMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLL 444
Query: 504 DAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEF 563
Y K + A+ VFD M +RD+V+W M++G+++ +E A++ ++E+ + R + F
Sbjct: 445 SMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGF 504
Query: 564 TFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGST 623
+ +++I A S++ L+ G+ FH I+ G D + AL+DMY K G E A F
Sbjct: 505 SLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLA 564
Query: 624 TWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGL 683
+ D+ CWNSM+ + HG KAL F +++ G P+ +T++ +L+ACSH G G
Sbjct: 565 SNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGK 624
Query: 684 DHFQSMAGFGIEPGMEHYASVVSLLGR--------------------------------N 711
+ M GI+ G +HY+ +V+L+ + N
Sbjct: 625 FLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVN 684
Query: 712 VWNVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAGRS 771
N+++G YAAE + +DP D+ ++ LLSN +A N W D ++R+K+ K+ G S
Sbjct: 685 TRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLS 744
Query: 772 WIEV-NNEVHAFVARDKSH 789
WIEV NN F + D+S+
Sbjct: 745 WIEVNNNNTQVFSSGDQSN 763
Score = 237 bits (605), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/551 (28%), Positives = 275/551 (49%), Gaps = 8/551 (1%)
Query: 72 KQVHAQIAISGLQCDT---FLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMY 128
+Q+HA + +G T + N L+ Y + L+ ARK+FD M RN+VS+++L S Y
Sbjct: 114 RQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAY 173
Query: 129 TKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSG 188
++ + +P+ +S++ C L + +G ++S +IK G
Sbjct: 174 SRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVL----EDVLMGSSLNSQIIKLG 229
Query: 189 FDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFN 248
+ +V V TS++ +Y+ G ++ A+ +FD + + AV+W T+I G +K+ + + L F
Sbjct: 230 YSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFR 289
Query: 249 QMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCG 308
M + V ++ S VL+ CS L GK IHA ++ D+ + N L+D Y CG
Sbjct: 290 NMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 309 RVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTR-SGWKPDDFACSSVL 367
++ A +F I N++SW ++I G +N F +AM ++ + R S +PD++ S+ +
Sbjct: 350 DMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAI 409
Query: 368 TSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVV 427
++ E G+ +H K E FV +L+ MY K A+KVFDVM +R+VV
Sbjct: 410 SATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVV 469
Query: 428 SYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLI 487
+ MI G+S+ A+ F EM + S++G S + L + H L
Sbjct: 470 LWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLA 529
Query: 488 IKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAI 547
I+ G + AL+D Y K + A +F + D+ WN+ML Y+Q E+A+
Sbjct: 530 IRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKAL 589
Query: 548 KLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMY 607
+ ++L + P+ T+ +L+ A S+ GS G+ N + + G+ S ++++
Sbjct: 590 SFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLV 649
Query: 608 AKCGSLEDAYE 618
+K G +++A E
Sbjct: 650 SKAGLVDEALE 660
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 150/292 (51%), Gaps = 10/292 (3%)
Query: 396 FVKNSLVDMYAKCDSLTEARKVFDVMADRNVVS---YNAMIEGYSKEEKL-SEALDLFHE 451
+ N+L+ MY +C SL +ARKVFD M RN+V+ +A+ E S L S+ + L
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 452 MRVGFVPPGLL--TFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDV---FAGSALIDAY 506
+ F+P + + V L S+ L+ ++QIH L++ G +A + LI Y
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 507 SKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLE-NEEAIKLYLELLLSQQRPNEFTF 565
+C S + AR VFD+M R++V +NA+ Y++ + A L + +PN TF
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 566 AALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTW 625
+L+ + L + G ++ +IKLG + + ++++ MY+ CG LE A F
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 626 KDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAG 677
+D WN+MI + + + L+ FR M++ G++P T+ VL+ CS G
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 338 bits (868), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 212/681 (31%), Positives = 347/681 (50%), Gaps = 42/681 (6%)
Query: 152 PDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDD 211
PD + S++ AC L + G +H V+ +GF D Y+ +SL+NLYAK G +
Sbjct: 44 PDTFTFPSLLKACASL----QRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAH 99
Query: 212 AKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSM 271
A+ VF+ + + V WT +I Y ++G + +L N+MR + L +LS
Sbjct: 100 ARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLE 159
Query: 272 LQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTL 331
+ + + +H + G D++V+N +++ Y KC V A+ LFD++E ++++SW T+
Sbjct: 160 ITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTM 216
Query: 332 IGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANI 391
I GY E +KL M G +PD + L+ G++ LE GR +H K
Sbjct: 217 ISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGF 276
Query: 392 ESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHE 451
+ D +K +L+ MY KC + +V + + +++VV + MI G + + +AL +F E
Sbjct: 277 DVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSE 336
Query: 452 MRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFS 511
M S++ + + S + +HG ++++G LD A ++LI Y+KC
Sbjct: 337 MLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGH 396
Query: 512 NKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLL-SQQRPNEFTFAALIT 570
+ ++F+ MN+RD+V WNA++ GY Q ++ +A+ L+ E+ + Q+ + FT +L+
Sbjct: 397 LDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQ 456
Query: 571 AASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVAC 630
A S+ G+L G+ H +I+ + S + +AL+DMY+KCG LE A F S +WKDV
Sbjct: 457 ACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS 516
Query: 631 WNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMA 690
W +I HG+ AL ++ E + G+EPN++ F+ VLS+CSH G+++ GL F SM
Sbjct: 517 WGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMV 576
Query: 691 -GFGIEPGMEHYASVVSLLGR--------------------NVWNV-----------ELG 718
FG+EP EH A VV LL R +V + E+
Sbjct: 577 RDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVE 636
Query: 719 RYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNE 778
E I + P D+G Y L ++FA W D + +M GL K G S IE+N +
Sbjct: 637 DIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGK 696
Query: 779 VHAFVARDKSHHAADLTYSIL 799
F SH +D T S+L
Sbjct: 697 TTTFFMNHTSH--SDDTVSLL 715
Score = 279 bits (713), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 175/591 (29%), Positives = 312/591 (52%), Gaps = 27/591 (4%)
Query: 44 ISTKRSVLAWFLQRPLPDNF----------NNKRITCYKQVHAQIAISGLQCDTFLANML 93
+ST S+LA + LPD F + +R++ +H Q+ ++G D ++++ L
Sbjct: 31 LSTFSSMLA---NKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSL 87
Query: 94 LRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEA--LMVFIGFLKVGNGR 151
+ Y+K L ARK+F+ M ER++V W++++ Y++ G EA L+ + F + G
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 152 PDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDD 211
+ S + TQL + +H F + GFD D+ V S++NLY K V D
Sbjct: 148 VTLLEMLSGVLEITQL----------QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGD 197
Query: 212 AKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSM 271
AK +FD + + VSW T+I+GY G L L +MR + D+ + LS
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 272 LQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTL 331
+ + G+ +H +++ G +D+ + L+ Y KCG+ + + R+ + I K+++ WT +
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVM 317
Query: 332 IGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANI 391
I G M+ +A+ +F+EM +SG A +SV+ SC + + + G VH Y +
Sbjct: 318 ISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGY 377
Query: 392 ESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHE 451
D NSL+ MYAKC L ++ +F+ M +R++VS+NA+I GY++ L +AL LF E
Sbjct: 378 TLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEE 437
Query: 452 MRVGFVPP-GLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCF 510
M+ V T VSLL SS +L K IH ++I+ + +AL+D YSKC
Sbjct: 438 MKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCG 497
Query: 511 SNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALIT 570
+ A+ FD ++ +D+V W ++ GY + + A+++Y E L S PN F A+++
Sbjct: 498 YLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLS 557
Query: 571 AASNLGSLKHGQQFHNHLIK-LGLDFDSFITSALIDMYAKCGSLEDAYETF 620
+ S+ G ++ G + + +++ G++ + + ++D+ + +EDA++ +
Sbjct: 558 SCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFY 608
Score = 234 bits (596), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/440 (31%), Positives = 234/440 (53%), Gaps = 4/440 (0%)
Query: 244 LNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDF 303
L+ F+ M ++ D + S+L AC+ LQ + G IH VL G D + + L++
Sbjct: 31 LSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNL 90
Query: 304 YSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFAC 363
Y+K G + AR++F+E+ ++++ WT +IG Y + EA L EM G KP
Sbjct: 91 YAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPV-- 148
Query: 364 SSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMAD 423
++L V + Q + +H ++ + D V NS++++Y KCD + +A+ +FD M
Sbjct: 149 -TLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ 207
Query: 424 RNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQI 483
R++VS+N MI GY+ +SE L L + MR + P TF + L +S ++ LE + +
Sbjct: 208 RDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRML 267
Query: 484 HGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLEN 543
H I+K G +D+ +ALI Y KC + + V + + +D+V W M+ G +
Sbjct: 268 HCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRA 327
Query: 544 EEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSAL 603
E+A+ ++ E+L S + A+++ + + LGS G H ++++ G D+ ++L
Sbjct: 328 EKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSL 387
Query: 604 IDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEP-N 662
I MYAKCG L+ + F +D+ WN++I A + + KALLLF EM + ++ +
Sbjct: 388 ITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVD 447
Query: 663 YITFVGVLSACSHAGLIEDG 682
T V +L ACS AG + G
Sbjct: 448 SFTVVSLLQACSSAGALPVG 467
>sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containing protein At5g08490
OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1
Length = 849
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 224/789 (28%), Positives = 390/789 (49%), Gaps = 80/789 (10%)
Query: 93 LLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRP 152
+L Y+K +D +K+F M + V W+ +++ + G E + F +P
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKP 120
Query: 153 DDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSV-DD 211
+ V+ C +LG D N G+ MHS++IK+G ++D VG +L+++YAK G + D
Sbjct: 121 SSVTFAIVLPLCVRLG---DSYN-GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPD 176
Query: 212 AKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSM 271
A FDG+ K VSW II G+ ++ + F M + + +++VL C+
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 272 LQ---FVGGGKQIHAHVLRRG-MGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIIS 327
+ G+QIH++V++R + V V N L+ FY + GR++ A LF + K+++S
Sbjct: 237 MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS 296
Query: 328 WTTLIGGYMQNSFDREAMKLFTEMTRSG-WKPDDFACSSVLTSCGSVEALEQGRQVHAYS 386
W +I GY N +A +LF + G PD S+L C + L G+++H+Y
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Query: 387 FK-ANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEA 445
+ + + D V N+L+ YA+ + A F +M+ ++++S+NA+++ ++ K +
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQF 416
Query: 446 LDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLD---VFAGSAL 502
L+L H + + +T +SLL +V + K++HG +K G+ D G+AL
Sbjct: 417 LNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNAL 476
Query: 503 IDAYSKC--------------------------------FSNKDARLVFDEMNQRDIVVW 530
+DAY+KC S+ DA+++F EM+ D+ W
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTW 536
Query: 531 NAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIK 590
+ M+ Y + EAI ++ E+ RPN T L+ + L SL +Q H ++I+
Sbjct: 537 SLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR 596
Query: 591 LGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLL 650
GL D + L+D+YAKCGSL+ AY F S +D+ + +M+ A HG +AL++
Sbjct: 597 GGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMI 655
Query: 651 FREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAGF-GIEPGMEHYASVVSLLG 709
+ M ++P+++ +L+AC HAGLI+DGL + S+ G++P ME YA V L+
Sbjct: 656 YSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIA 715
Query: 710 R--------------------NVW-----------NVELGRYAAEMAISIDPMDSGSYTL 738
R N+W ++LG A + + D+G++ L
Sbjct: 716 RGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVL 775
Query: 739 LSNTFACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSI 798
+SN +A ++ W ++R M + K AG SW+EV+ + + FV+ D SH D + +
Sbjct: 776 ISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDL 835
Query: 799 LDNLILHIK 807
++ L L +K
Sbjct: 836 VNALYLQMK 844
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 150/543 (27%), Positives = 257/543 (47%), Gaps = 46/543 (8%)
Query: 177 GEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGY-V 235
G +H V K G V S++N+YAK +DD + +F + V W ++TG V
Sbjct: 40 GRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV 99
Query: 236 KSGRSDLSLNLFNQMRETDVVHDKYL-LSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDV 294
GR ++ F M D + + VL C L GK +H+++++ G+ D
Sbjct: 100 SCGRE--TMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDT 157
Query: 295 SVINVLMDFYSKCGRV-KMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTR 353
V N L+ Y+K G + A FD I K+++SW +I G+ +N+ +A + F M +
Sbjct: 158 LVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK 217
Query: 354 SGWKPDDFACSSVLTSCGSVE---ALEQGRQVHAYSFKAN-IESDNFVKNSLVDMYAKCD 409
+P+ ++VL C S++ A GRQ+H+Y + + +++ FV NSLV Y +
Sbjct: 218 EPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVG 277
Query: 410 SLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEM-RVGFVPPGLLTFVSLL 468
+ EA +F M +++VS+N +I GY+ + +A LFH + G V P +T +S+L
Sbjct: 278 RIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISIL 337
Query: 469 GLSSSVFSLESSKQIHGLIIKYGVFL-DVFAGSALIDAYSKCFSNKDARLVFDEMNQRDI 527
+ + + L S K+IH I+++ L D G+ALI Y++ A F M+ +DI
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI 397
Query: 528 VVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNH 587
+ WNA+L + + + + L LL + T +L+ N+ + ++ H +
Sbjct: 398 ISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGY 457
Query: 588 LIKLGLDFD---SFITSALIDMYAKCGSLE------------------------------ 614
+K GL D + +AL+D YAKCG++E
Sbjct: 458 SVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGS 517
Query: 615 --DAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSA 672
DA F + D+ W+ M+ A P +A+ +FRE+ G+ PN +T + +L
Sbjct: 518 HDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPV 577
Query: 673 CSH 675
C+
Sbjct: 578 CAQ 580
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 224/451 (49%), Gaps = 13/451 (2%)
Query: 258 DKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLF 317
D + V+ AC+ + + G+ +H V + G V +++ Y+KC R+ +++F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 318 DEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGW-KPDDFACSSVLTSCGSVEAL 376
+++ + + W ++ G + S RE M+ F M + KP + VL C +
Sbjct: 80 RQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 377 EQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSL-TEARKVFDVMADRNVVSYNAMIEG 435
G+ +H+Y KA +E D V N+LV MYAK + +A FD +AD++VVS+NA+I G
Sbjct: 139 YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 436 YSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSV---FSLESSKQIHGLIIKYG- 491
+S+ +++A F M P T ++L + +S+ + S +QIH +++
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW 258
Query: 492 VFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYL 551
+ VF ++L+ Y + ++A +F M +D+V WN ++ GY E +A +L+
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 552 ELL-LSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLG-LDFDSFITSALIDMYAK 609
L+ P+ T +++ + L L G++ H+++++ L D+ + +ALI YA+
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 610 CGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGV 669
G AY F + KD+ WN+++ A + + L L ++ E + + +T + +
Sbjct: 379 FGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSL 438
Query: 670 LSACSHAGLIEDGLDHFQSMAGFGIEPGMEH 700
L C + G+ + + G+ ++ G+ H
Sbjct: 439 LKFCINV----QGIGKVKEVHGYSVKAGLLH 465
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 163/329 (49%), Gaps = 8/329 (2%)
Query: 354 SGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTE 413
SG+ D V+ +C SV L GR +H FK + + V S+++MYAKC + +
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 414 ARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVP-PGLLTFVSLLGLSS 472
+K+F M + V +N ++ G S E + F M P P +TF +L L
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPKPSSVTFAIVLPLCV 133
Query: 473 SVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKC-FSNKDARLVFDEMNQRDIVVWN 531
+ + K +H IIK G+ D G+AL+ Y+K F DA FD + +D+V WN
Sbjct: 134 RLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWN 193
Query: 532 AMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLG---SLKHGQQFHNHL 588
A++ G+++ +A + + +L PN T A ++ +++ + + G+Q H+++
Sbjct: 194 AIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYV 253
Query: 589 IKLG-LDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKA 647
++ L F+ ++L+ Y + G +E+A F KD+ WN +I A + E KA
Sbjct: 254 VQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKA 313
Query: 648 LLLFREMIIEG-LEPNYITFVGVLSACSH 675
LF ++ +G + P+ +T + +L C+
Sbjct: 314 FQLFHNLVHKGDVSPDSVTIISILPVCAQ 342
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 119/244 (48%), Gaps = 8/244 (3%)
Query: 91 NMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNG 150
N LL Y + D A+ LF MS +L +WS +V +Y + EA+ VF G
Sbjct: 506 NSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGM- 564
Query: 151 RPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVD 210
RP+ + +++ C QL ++ Q H ++I+ G D+ + +L+++YAK GS+
Sbjct: 565 RPNTVTIMNLLPVCAQLA----SLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLK 619
Query: 211 DAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACS 270
A VF + V +T ++ GY GR +L +++ M E+++ D ++++L+AC
Sbjct: 620 HAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACC 679
Query: 271 MLQFVGGGKQIHAHVLR-RGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVK-NIISW 328
+ G QI+ + GM + +D ++ GR+ A ++ V+ N W
Sbjct: 680 HAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIW 739
Query: 329 TTLI 332
TL+
Sbjct: 740 GTLL 743
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
+Q H I GL D L LL Y+K L A +F + + R+LV ++++V+ Y
Sbjct: 588 RQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVH 646
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
G G+EALM++ + N +PD +++++ AC G DG + + + + G
Sbjct: 647 GRGKEALMIY-SHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTV---HGMKP 702
Query: 192 DVYVGTSLMNLYAKNGSVDDA-KFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQM 250
+ ++L A+ G +DDA FV + A W T++ R DL ++ N +
Sbjct: 703 TMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHL 762
Query: 251 --RETDVVHDKYLLSSVLSA 268
E+D + L+S++ +A
Sbjct: 763 LQAESDDTGNHVLISNMYAA 782
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 6/147 (4%)
Query: 554 LLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSL 613
LLS + F ++ A +++ L G+ H + KLG S ++ ++++MYAKC +
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 614 EDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREM-IIEGLEPNYITFVGVLSA 672
+D + F D WN ++ T + + F+ M + +P+ +TF VL
Sbjct: 73 DDCQKMFRQMDSLDPVVWN-IVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPL 131
Query: 673 CSHAGLIEDGLDHFQSMAGFGIEPGME 699
C G +G +SM + I+ G+E
Sbjct: 132 CVRLGDSYNG----KSMHSYIIKAGLE 154
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 335 bits (859), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 213/736 (28%), Positives = 369/736 (50%), Gaps = 42/736 (5%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
++ +A I GL + F+A+ L+ +Y+ + + ++F ++ R++ W+S++ +
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSN 103
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIK-SGFD 190
G +L F L G PD + V+ AC +L +VG +H V+K GFD
Sbjct: 104 GDYARSLCFFFSMLLSGQS-PDHFTAPMVVSACAEL----LWFHVGTFVHGLVLKHGGFD 158
Query: 191 RDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQM 250
R+ VG S + Y+K G + DA VFD + + V+WT II+G+V++G S+ L +M
Sbjct: 159 RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
Query: 251 RETDVVHDK---YLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKC 307
DK L ACS L + G+ +H ++ G+ V + + FYSK
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 308 GRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVL 367
G A F E+ +++ SWT++I ++ E+ +F EM G PD S ++
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 368 TSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADR-NV 426
G + + QG+ H + + D+ V NSL+ MY K + L+ A K+F +++ N
Sbjct: 339 NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNK 398
Query: 427 VSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGL 486
++N M++GY K + + ++LF +++ + + S++ S + ++ K +H
Sbjct: 399 EAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCY 458
Query: 487 IIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEA 546
++K + L + ++LID Y K A +F E + +++ WNAM+ Y ++E+A
Sbjct: 459 VVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKA 517
Query: 547 IKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDM 606
I L+ ++ +P+ T L+ A N GSL+ GQ H ++ + + + +++ALIDM
Sbjct: 518 IALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDM 577
Query: 607 YAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITF 666
YAKCG LE + E F + KD CWN MI HG+ A+ LF +M ++P TF
Sbjct: 578 YAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTF 637
Query: 667 VGVLSACSHAGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLLGRN--------------- 711
+ +LSAC+HAGL+E G F M + ++P ++HY+ +V LL R+
Sbjct: 638 LALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPF 697
Query: 712 -----VWNV-----------ELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQV 755
+W E+G AE A++ DP + G Y +L+N ++ W +A++
Sbjct: 698 SPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERA 757
Query: 756 RKKMDLDGLMKEAGRS 771
R+ M G+ K AG S
Sbjct: 758 REMMRESGVGKRAGHS 773
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 153/309 (49%), Gaps = 11/309 (3%)
Query: 370 CGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSY 429
C +LE R+ +A + + FV + L+ YA + +VF ++ R++ +
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 430 NAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIK 489
N++I+ + + +L F M + P T ++ + + +HGL++K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 490 YGVF-LDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIK 548
+G F + G++ + YSKC +DA LVFDEM RD+V W A++ G+ Q E+E +
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 549 LYLELLLSQ----QRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALI 604
YL + S +PN T A SNLG+LK G+ H +K GL F+ S++
Sbjct: 214 -YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMF 272
Query: 605 DMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYI 664
Y+K G+ +AY +F +D+ W S+I + A G+ ++ +F EM +G+ P+
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPD-- 330
Query: 665 TFVGVLSAC 673
GV+ +C
Sbjct: 331 ---GVVISC 336
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 115/233 (49%), Gaps = 8/233 (3%)
Query: 470 LSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVV 529
L SLES ++ + LII G+ ++F S LI +Y+ + VF + +RDI +
Sbjct: 33 LCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFL 92
Query: 530 WNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLI 589
WN+++ + + ++ + +LLS Q P+ FT +++A + L G H ++
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 590 KL-GLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKAL 648
K G D ++ + ++ + Y+KCG L+DA F +DV W ++I + +GE L
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL 212
Query: 649 LLFREMIIEGLE---PNYITFVGVLSACSHAGLIEDGLDHFQSMAGFGIEPGM 698
+M G + PN T ACS+ G +++G + + GF ++ G+
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEG----RCLHGFAVKNGL 261
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 330 bits (846), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 230/752 (30%), Positives = 371/752 (49%), Gaps = 56/752 (7%)
Query: 106 ARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGN-GRPDDYILSSVICAC 164
AR+LFD + + V W++++ + EAL+ + K D Y SS + AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 165 TQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDD------AKFVFDG 218
+ G+ +H +I+ + V SLMN+Y + D + VFD
Sbjct: 118 AET----KNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDN 173
Query: 219 LMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGG 278
+ K V+W T+I+ YVK+GR+ + F M +V +V A S+ + +
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 279 KQIHAHVLRRG--MGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYM 336
+ +L+ G D+ V++ + Y++ G ++ +RR+FD +NI W T+IG Y+
Sbjct: 234 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV 293
Query: 337 QNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQ---GRQVHAYSFKANIES 393
QN E+++LF E S D + L + +V AL+Q GRQ H + K E
Sbjct: 294 QNDCLVESIELFLEAIGSKEIVSDEV--TYLLAASAVSALQQVELGRQFHGFVSKNFREL 351
Query: 394 DNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMR 453
+ NSL+ MY++C S+ ++ VF M +R+VVS+N MI + + E L L +EM+
Sbjct: 352 PIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 411
Query: 454 VGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNK 513
+T +LL +S++ + E KQ H +I+ G+ + S LID YSK +
Sbjct: 412 KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSGLIR 470
Query: 514 DARLVFDEMN--QRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITA 571
++ +F+ +RD WN+M+ GYTQ E+ ++ ++L RPN T A+++ A
Sbjct: 471 ISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPA 530
Query: 572 ASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACW 631
S +GS+ G+Q H I+ LD + F+ SAL+DMY+K G+++ A + F T ++ +
Sbjct: 531 CSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTY 590
Query: 632 NSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAG 691
+MI HG +A+ LF M G++P+ ITFV VLSACS++GLI++GL F+ M
Sbjct: 591 TTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
Query: 692 -FGIEPGMEHYASVVSLLGR---------------------NVW-----------NVELG 718
+ I+P EHY + +LGR +W +EL
Sbjct: 651 VYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELA 710
Query: 719 RYAAEMAISIDPMD--SGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVN 776
+E D SG LLSN +A W +VR+ M GL KE GRS IE+
Sbjct: 711 ETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIA 770
Query: 777 NEVHAFVARDKSHHAADLTYSILDNLILHIKG 808
V+ FV+RD+ H + Y ++D L ++G
Sbjct: 771 GYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRG 802
Score = 239 bits (609), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 293/552 (53%), Gaps = 18/552 (3%)
Query: 102 DLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVI 161
+ D RK+FD M +N+V+W++L+S Y K G EA F G + +P +V
Sbjct: 163 EYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQF-GIMMRMEVKPSPVSFVNVF 221
Query: 162 CACTQLGGGGDGGNVGEQMHSFVIKSG--FDRDVYVGTSLMNLYAKNGSVDDAKFVFDGL 219
A + + NV + ++K G + +D++V +S +++YA+ G ++ ++ VFD
Sbjct: 222 PAVS-ISRSIKKANV---FYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC 277
Query: 220 MVKTAVSWTTIITGYVKSGRSDLSLNLF-NQMRETDVVHDK--YLLSSVLSACSMLQFVG 276
+ + W T+I YV++ S+ LF + ++V D+ YLL++ SA S LQ V
Sbjct: 278 VERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAA--SAVSALQQVE 335
Query: 277 GGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYM 336
G+Q H V + + + ++N LM YS+CG V + +F + ++++SW T+I ++
Sbjct: 336 LGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFV 395
Query: 337 QNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNF 396
QN D E + L EM + G+K D +++L++ ++ E G+Q HA+ + I+ +
Sbjct: 396 QNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG- 454
Query: 397 VKNSLVDMYAKCDSLTEARKVFD--VMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRV 454
+ + L+DMY+K + ++K+F+ A+R+ ++N+MI GY++ + +F +M
Sbjct: 455 MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Query: 455 GFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKD 514
+ P +T S+L S + S++ KQ+HG I+ + +VF SAL+D YSK + K
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKY 574
Query: 515 ARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASN 574
A +F + +R+ V + M+LGY Q E AI L+L + S +P+ TF A+++A S
Sbjct: 575 AEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSY 634
Query: 575 LGSLKHGQQFHNHLIKL-GLDFDSFITSALIDMYAKCGSLEDAYE-TFGSTTWKDVA-CW 631
G + G + + ++ + S + DM + G + +AYE G ++A W
Sbjct: 635 SGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELW 694
Query: 632 NSMICTNAHHGE 643
S++ + HGE
Sbjct: 695 GSLLGSCKLHGE 706
Score = 233 bits (594), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 164/578 (28%), Positives = 285/578 (49%), Gaps = 20/578 (3%)
Query: 205 KNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVH--DKYLL 262
++G+ A+ +FD + T V W TII G++ + +L +++M++T D Y
Sbjct: 51 QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTY 110
Query: 263 SSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFY------SKCGRVKMARRL 316
SS L AC+ + + GK +H H++R V N LM+ Y C + R++
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 317 FDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEAL 376
FD + KN+++W TLI Y++ + EA + F M R KP + +V + ++
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSI 230
Query: 377 EQGRQVHAYSFKANIE--SDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIE 434
++ + K E D FV +S + MYA+ + +R+VFD +RN+ +N MI
Sbjct: 231 KKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIG 290
Query: 435 GYSKEEKLSEALDLFHEMRVGF--VPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGV 492
Y + + L E+++LF E +G + +T++ S++ +E +Q HG + K
Sbjct: 291 VYVQNDCLVESIELFLEA-IGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 493 FLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLE 552
L + ++L+ YS+C S + VF M +RD+V WN M+ + Q ++E + L E
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYE 409
Query: 553 LLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGS 612
+ + + T AL++AASNL + + G+Q H LI+ G+ F+ + S LIDMY+K G
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGL 468
Query: 613 LEDAYETFGSTTW--KDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVL 670
+ + + F + + +D A WNSMI +G K L+FR+M+ + + PN +T +L
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASIL 528
Query: 671 SACSHAGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLLGRNVWNVELGRYAAEMAISIDP 730
ACS G ++ G + + GF I ++ V S L +YA +M
Sbjct: 529 PACSQIGSVDLG----KQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE 584
Query: 731 MDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEA 768
+S +YT + + + M A + M G+ +A
Sbjct: 585 RNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDA 622
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 216/392 (55%), Gaps = 13/392 (3%)
Query: 86 DTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVF---I 142
D F+ + + Y++ D++ +R++FD+ ERN+ W++++ +Y + E++ +F I
Sbjct: 250 DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAI 309
Query: 143 GFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNL 202
G ++ + + +S + A Q+ +G Q H FV K+ + + + SLM +
Sbjct: 310 GSKEIVSDEVTYLLAASAVSALQQV-------ELGRQFHGFVSKNFRELPIVIVNSLMVM 362
Query: 203 YAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLL 262
Y++ GSV + VF + + VSW T+I+ +V++G D L L +M++ D +
Sbjct: 363 YSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITV 422
Query: 263 SSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFD--EI 320
+++LSA S L+ GKQ HA ++R+G+ + + + L+D YSK G ++++++LF+
Sbjct: 423 TALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGY 481
Query: 321 EVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGR 380
++ +W ++I GY QN + +F +M +P+ +S+L +C + +++ G+
Sbjct: 482 AERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGK 541
Query: 381 QVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEE 440
Q+H +S + ++ + FV ++LVDMY+K ++ A +F +RN V+Y MI GY +
Sbjct: 542 QLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHG 601
Query: 441 KLSEALDLFHEMRVGFVPPGLLTFVSLLGLSS 472
A+ LF M+ + P +TFV++L S
Sbjct: 602 MGERAISLFLSMQESGIKPDAITFVAVLSACS 633
Score = 155 bits (393), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 190/347 (54%), Gaps = 11/347 (3%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
+Q H ++ + + + N L+ YS+ + + +F +M ER++VSW++++S + +
Sbjct: 338 RQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQN 397
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYI-LSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFD 190
G +E LM+ K G DYI +++++ A + L +G+Q H+F+I+ G
Sbjct: 398 GLDDEGLMLVYEMQK--QGFKIDYITVTALLSAASNL----RNKEIGKQTHAFLIRQGIQ 451
Query: 191 RDVYVGTSLMNLYAKNGSVDDAKFVFD--GLMVKTAVSWTTIITGYVKSGRSDLSLNLFN 248
+ + + L+++Y+K+G + ++ +F+ G + +W ++I+GY ++G ++ + +F
Sbjct: 452 FE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFR 510
Query: 249 QMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCG 308
+M E ++ + ++S+L ACS + V GKQ+H +R+ + +V V + L+D YSK G
Sbjct: 511 KMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAG 570
Query: 309 RVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLT 368
+K A +F + + +N +++TT+I GY Q+ A+ LF M SG KPD +VL+
Sbjct: 571 AIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLS 630
Query: 369 SCGSVEALEQGRQVHAYSFKA-NIESDNFVKNSLVDMYAKCDSLTEA 414
+C +++G ++ + NI+ + + DM + + EA
Sbjct: 631 ACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEA 677
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 330 bits (845), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 190/628 (30%), Positives = 332/628 (52%), Gaps = 34/628 (5%)
Query: 207 GSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETD--VVHDKYLLSS 264
G++ A+ VFD + VSWT+II YV + SD +L LF+ MR D V D +LS
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 265 VLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKN 324
VL AC + G+ +HA+ ++ + V V + L+D Y + G++ + R+F E+ +N
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 325 IISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHA 384
++WT +I G + +E + F+EM+RS D + + L +C + ++ G+ +H
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 385 YSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSE 444
+ + V NSL MY +C + + +F+ M++R+VVS+ ++I Y + + +
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 445 ALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALID 504
A++ F +MR VPP TF S+ +S+ L +Q+H ++ G+ + ++++
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 505 AYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFT 564
YS C + A ++F M RDI+ W+ ++ GY Q EE K + + S +P +F
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 565 FAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTT 624
A+L++ + N+ ++ G+Q H + GL+ +S + S+LI+MY+KCGS+++A FG T
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 625 WKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLD 684
D+ +MI A HG+ +A+ LF + + G P+ +TF+ VL+AC+H+G ++ G
Sbjct: 474 RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFH 533
Query: 685 HFQSMA-GFGIEPGMEHYASVVSLLGRN--------------------VW---------- 713
+F M + + P EHY +V LL R VW
Sbjct: 534 YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Query: 714 -NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAGRSW 772
++E GR AAE + +DP + + L+N ++ +A VRK M G++KE G S
Sbjct: 594 GDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSS 653
Query: 773 IEVNNEVHAFVARDKSHHAADLTYSILD 800
I++ + V AFV+ D+ H ++ Y+IL+
Sbjct: 654 IKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 302 bits (774), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 194/652 (29%), Positives = 333/652 (51%), Gaps = 30/652 (4%)
Query: 54 FLQRPLPDNFNNKRITCYKQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTM 113
LQ+P+ +N + IS F N LR+ A +L AR++FD M
Sbjct: 21 LLQKPVEENI--------------VRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKM 66
Query: 114 SERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNG-RPDDYILSSVICACTQLGGGGD 172
++VSW+S++ Y +EAL++F V + PD +LS V+ AC G
Sbjct: 67 PHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC------GQ 120
Query: 173 GGNV--GEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTI 230
N+ GE +H++ +K+ VYVG+SL+++Y + G +D + VF + + AV+WT I
Sbjct: 121 SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAI 180
Query: 231 ITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGM 290
ITG V +GR L F++M ++ + D Y + L AC+ L+ V GK IH HV+ RG
Sbjct: 181 ITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF 240
Query: 291 GMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTE 350
+ V N L Y++CG ++ LF+ + ++++SWT+LI Y + + +A++ F +
Sbjct: 241 VTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIK 300
Query: 351 MTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDS 410
M S P++ +S+ ++C S+ L G Q+H + V NS++ MY+ C +
Sbjct: 301 MRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGN 360
Query: 411 LTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGL 470
L A +F M R+++S++ +I GY + E F MR P SLL +
Sbjct: 361 LVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSV 420
Query: 471 SSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVW 530
S ++ +E +Q+H L + +G+ + S+LI+ YSKC S K+A ++F E ++ DIV
Sbjct: 421 SGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSL 480
Query: 531 NAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIK 590
AM+ GY + +++EAI L+ + L RP+ TF +++TA ++ G L G + N + +
Sbjct: 481 TAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQE 540
Query: 591 L-GLDFDSFITSALIDMYAKCGSLEDAYETFGSTTW-KDVACWNSMICTNAHHGEPMKAL 648
+ ++D+ + G L DA + +W KD W +++ G+ +
Sbjct: 541 TYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGR 600
Query: 649 LLFREMIIEGLEPNYIT-FVGVLSACSHAGLIEDGLDHFQSMAGFGI--EPG 697
E I+E L+P T V + + S G +E+ + ++M G+ EPG
Sbjct: 601 RA-AERILE-LDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPG 650
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 326 bits (835), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 206/674 (30%), Positives = 338/674 (50%), Gaps = 36/674 (5%)
Query: 177 GEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVK 236
+ +H ++K G D++ L+N Y K G DA +FD + + VS+ T+ GY
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC 127
Query: 237 SGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSV 296
+ L++++ + ++ +S L L +H+ +++ G + V
Sbjct: 128 QD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFV 183
Query: 297 INVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGW 356
L++ YS CG V AR +F+ I K+I+ W ++ Y++N + +++KL + M +G+
Sbjct: 184 GAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGF 243
Query: 357 KPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARK 416
P+++ + L + + A + + VH K D V L+ +Y + +++A K
Sbjct: 244 MPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFK 303
Query: 417 VFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFS 476
VF+ M +VV ++ MI + + +EA+DLF MR FV P T S+L +
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 477 LESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLG 536
+Q+HGL++K G LD++ +ALID Y+KC A +F E++ ++ V WN +++G
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
Query: 537 YTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFD 596
Y E +A ++ E L +Q E TF++ + A ++L S+ G Q H IK
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 597 SFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMII 656
++++LIDMYAKCG ++ A F DVA WN++I + HG +AL + M
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 657 EGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMA-GFGIEPGMEHYASVVSLLGRN---- 711
+PN +TF+GVLS CS+AGLI+ G + F+SM GIEP +EHY +V LLGR+
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 712 ----------------VW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFA 744
+W N E R +AE + I+P D +Y L+SN +A
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYA 663
Query: 745 CNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLIL 804
WA+ +RK M G+ KE G SWIE +VH F H L +L+ L +
Sbjct: 664 GAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNM 723
Query: 805 HIKGVGYVPNTSAL 818
GYVP+ +A+
Sbjct: 724 KATRAGYVPDRNAV 737
Score = 262 bits (669), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 167/566 (29%), Positives = 284/566 (50%), Gaps = 11/566 (1%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
K +H I G D F N+LL Y KA A LFD M ERN VS+ +L +
Sbjct: 69 KAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLA-----Q 123
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
GY + + L + ++ +S + L D + +HS ++K G+D
Sbjct: 124 GYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSL----DKAEICPWLHSPIVKLGYDS 179
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
+ +VG +L+N Y+ GSVD A+ VF+G++ K V W I++ YV++G + SL L + MR
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVK 311
+ + Y + L A L K +H +L+ +D V L+ Y++ G +
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMS 299
Query: 312 MARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCG 371
A ++F+E+ +++ W+ +I + QN F EA+ LF M + P++F SS+L C
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Query: 372 SVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNA 431
+ G Q+H K + D +V N+L+D+YAKC+ + A K+F ++ +N VS+N
Sbjct: 360 IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNT 419
Query: 432 MIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYG 491
+I GY + +A +F E V +TF S LG +S+ S++ Q+HGL IK
Sbjct: 420 VIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTN 479
Query: 492 VFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYL 551
V ++LID Y+KC K A+ VF+EM D+ WNA++ GY+ +A+++
Sbjct: 480 NAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILD 539
Query: 552 ELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIK-LGLDFDSFITSALIDMYAKC 610
+ +PN TF +++ SN G + GQ+ +I+ G++ + ++ + +
Sbjct: 540 IMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRS 599
Query: 611 GSLEDAYETFGSTTWK-DVACWNSMI 635
G L+ A + ++ V W +M+
Sbjct: 600 GQLDKAMKLIEGIPYEPSVMIWRAML 625
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 218/426 (51%), Gaps = 4/426 (0%)
Query: 258 DKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLF 317
D + ++L C K IH +L++G +D+ N+L++ Y K G K A LF
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 318 DEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALE 377
DE+ +N +S+ TL GY ++ + L++ + R G + + +S L S++ E
Sbjct: 108 DEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 378 QGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYS 437
+H+ K +S+ FV +L++ Y+ C S+ AR VF+ + +++V + ++ Y
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 438 KEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVF 497
+ ++L L MR+ P TF + L S + + + +K +HG I+K LD
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 498 AGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQ 557
G L+ Y++ DA VF+EM + D+V W+ M+ + Q EA+ L++ + +
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 558 QRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAY 617
PNEFT ++++ + G+Q H ++K+G D D ++++ALID+YAKC ++ A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 618 ETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSHAG 677
+ F + K+ WN++I + GE KA +FRE + + +TF L AC+
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 678 LIEDGL 683
++ G+
Sbjct: 464 SMDLGV 469
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 325 bits (833), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 203/659 (30%), Positives = 344/659 (52%), Gaps = 37/659 (5%)
Query: 181 HSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRS 240
H + IK G D+YV +++ Y K G + A +FD + + +VSW T+I+GY G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 241 DLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVL 300
+ + LF M+ + D Y S +L + ++ G+Q+H V++ G +V V + L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 301 MDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMT-RSGWKPD 359
+D Y+KC RV+ A F EI N +SW LI G++Q + A L M ++ D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 360 DFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFD 419
+ +LT +QVHA K ++ + + N+++ YA C S+++A++VFD
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 420 VM-ADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLE 478
+ ++++S+N+MI G+SK E A +LF +M+ +V + T+ LL S
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 479 SSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSN--KDARLVFDEMNQRDIVVWNAMLLG 536
K +HG++IK G+ A +ALI Y + + +DA +F+ + +D++ WN+++ G
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 537 YTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFD 596
+ Q+ +E+A+K + L S+ + +++ F+AL+ + S+L +L+ GQQ H K G +
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSN 442
Query: 597 SFITSALIDMYAKCGSLEDAYETFGSTTWK-DVACWNSMICTNAHHGEPMKALLLFREMI 655
F+ S+LI MY+KCG +E A + F + K WN+MI A HG +L LF +M
Sbjct: 443 EFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMC 502
Query: 656 IEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAG-FGIEPGMEHYASVVSLLG----- 709
+ ++ +++TF +L+ACSH GLI++GL+ M + I+P MEHYA+ V LLG
Sbjct: 503 NQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLV 562
Query: 710 --------------------------RNVWNVELGRYAAEMAISIDPMDSGSYTLLSNTF 743
R +E+ A + I+P D +Y LS+ +
Sbjct: 563 NKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMY 622
Query: 744 ACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNL 802
+ W + V+K M G+ K G SWIE+ N+V AF A D+S+ Y ++ +L
Sbjct: 623 SDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDL 681
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/485 (36%), Positives = 273/485 (56%), Gaps = 33/485 (6%)
Query: 364 SSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMAD 423
+++L C + L QGR VHA+ ++ D + N+L++MYAKC SL EARKVF+ M
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 424 RNVVSYNAMIEGYSKEEKLSEALDLFHEM-RVGFVPPGLLTFVSLLGLSSSVFSLESSKQ 482
R+ V++ +I GYS+ ++ +AL F++M R G+ P T S++ +++ Q
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGY-SPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 483 IHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLE 542
+HG +K G +V GSAL+D Y++ DA+LVFD + R+ V WNA++ G+ ++
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 543 NEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSA 602
E+A++L+ +L RP+ F++A+L A S+ G L+ G+ H ++IK G +F +
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 603 LIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPN 662
L+DMYAK GS+ DA + F +DV WNS++ A HG +A+ F EM G+ PN
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 663 YITFVGVLSACSHAGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLLGR------------ 710
I+F+ VL+ACSH+GL+++G +++ M GI P HY +VV LLGR
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 711 --------NVW-----------NVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWAD 751
+W N ELG YAAE +DP D G + +L N +A W D
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWND 482
Query: 752 AKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIKGVGY 811
A +VRKKM G+ KE SW+E+ N +H FVA D+ H + + ++ IK +GY
Sbjct: 483 AARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGY 542
Query: 812 VPNTS 816
VP+TS
Sbjct: 543 VPDTS 547
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 194/349 (55%), Gaps = 5/349 (1%)
Query: 74 VHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGY 133
VHA I S + D + N LL Y+K L+ ARK+F+ M +R+ V+W++L+S Y++
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 134 GEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDV 193
+AL+ F L+ G P+++ LSSVI A G G Q+H F +K GFD +V
Sbjct: 142 PCDALLFFNQMLRFGYS-PNEFTLSSVIKA----AAAERRGCCGHQLHGFCVKCGFDSNV 196
Query: 194 YVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRET 253
+VG++L++LY + G +DDA+ VFD L + VSW +I G+ + ++ +L LF M
Sbjct: 197 HVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD 256
Query: 254 DVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMA 313
+ +S+ ACS F+ GK +HA++++ G + N L+D Y+K G + A
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 314 RRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSV 373
R++FD + ++++SW +L+ Y Q+ F +EA+ F EM R G +P++ + SVLT+C
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS 376
Query: 374 EALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMA 422
L++G + K I + + ++VD+ + L A + + M
Sbjct: 377 GLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
Score = 213 bits (542), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 207/359 (57%), Gaps = 1/359 (0%)
Query: 177 GEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVK 236
G +H+ +++S F D+ +G +L+N+YAK GS+++A+ VF+ + + V+WTT+I+GY +
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 237 SGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSV 296
R +L FNQM +++ LSSV+ A + + G Q+H ++ G +V V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 297 INVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGW 356
+ L+D Y++ G + A+ +FD +E +N +SW LI G+ + S +A++LF M R G+
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 357 KPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARK 416
+P F+ +S+ +C S LEQG+ VHAY K+ + F N+L+DMYAK S+ +ARK
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 417 VFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFS 476
+FD +A R+VVS+N+++ Y++ EA+ F EMR + P ++F+S+L S
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 477 LESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFS-NKDARLVFDEMNQRDIVVWNAML 534
L+ + L+ K G+ + + ++D + N+ R + + + +W A+L
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 140/268 (52%), Gaps = 6/268 (2%)
Query: 66 KRITCYKQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLV 125
+R C Q+H G + + + LL Y++ +D A+ +FD + RN VSW++L+
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 126 SMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVI 185
+ + ++ E+AL +F G L+ G RP + +S+ AC+ G G+ +H+++I
Sbjct: 235 AGHARRSGTEKALELFQGMLRDG-FRPSHFSYASLFGACSSTG----FLEQGKWVHAYMI 289
Query: 186 KSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLN 245
KSG + G +L+++YAK+GS+ DA+ +FD L + VSW +++T Y + G ++
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 246 LFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYS 305
F +MR + ++ SVL+ACS + G + + + G+ + ++D
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLG 409
Query: 306 KCGRVKMARRLFDEIEVKNIIS-WTTLI 332
+ G + A R +E+ ++ + W L+
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALL 437
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 192/644 (29%), Positives = 333/644 (51%), Gaps = 36/644 (5%)
Query: 200 MNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDK 259
M K S DA+ +F + ++ W T++ + + + L F+ M + D
Sbjct: 1 MGFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDN 60
Query: 260 YLLSSVLSACSMLQFVGGGKQIHAHVLRR-GMGMDVSVINVLMDFYSKCGRVKMARRLFD 318
+ L L AC L+ V G+ IH V + +G D+ V + L+ Y KCGR+ A R+FD
Sbjct: 61 FTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD 120
Query: 319 EIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMT-RSGWKPDDFACSSVLTSCGSVEALE 377
E+E +I++W++++ G+ +N +A++ F M S PD +++++C +
Sbjct: 121 ELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 180
Query: 378 QGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYS 437
GR VH + + +D + NSL++ YAK + EA +F ++A+++V+S++ +I Y
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYV 240
Query: 438 KEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVF 497
+ +EAL +F++M P + T + +L ++ LE ++ H L I+ G+ +V
Sbjct: 241 QNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK 300
Query: 498 AGSALIDAYSKCFSNKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLY-LELLLS 556
+AL+D Y KCFS ++A VF + ++D+V W A++ G+T +I+ + + LL +
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 557 QQRPNEFTFAALITAASNLGSLKHGQQFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDA 616
RP+ ++ + S LG L+ + FH+++IK G D + FI ++L+++Y++CGSL +A
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 617 YETFGSTTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEG-LEPNYITFVGVLSACSH 675
+ F KD W S+I HG+ KAL F M+ ++PN +TF+ +LSACSH
Sbjct: 421 SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480
Query: 676 AGLIEDGLDHFQSMAG-FGIEPGMEHYASVVSLLGRN----------------------- 711
AGLI +GL F+ M + + P +EHYA +V LLGR
Sbjct: 481 AGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILG 540
Query: 712 --------VWNVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDG 763
N E+ A+ ++ +G Y L+SN + W + +++R + G
Sbjct: 541 TLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRG 600
Query: 764 LMKEAGRSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIK 807
+ K S IE+ +VH FVA D+ H + Y +L L LH+K
Sbjct: 601 IKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 294/531 (55%), Gaps = 17/531 (3%)
Query: 95 RNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDD 154
R +S + D AR++F M++R+L W++L+ +++ EE L F + +PD+
Sbjct: 5 RKFSSSVD---ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR-DEEKPDN 60
Query: 155 YILSSVICACTQLGGGGDGGNVGEQMHSFVIKS-GFDRDVYVGTSLMNLYAKNGSVDDAK 213
+ L + AC +L N GE +H FV K D+YVG+SL+ +Y K G + +A
Sbjct: 61 FTLPVALKACGEL----REVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEAL 116
Query: 214 FVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQM-RETDVVHDKYLLSSVLSACSML 272
+FD L V+W+++++G+ K+G ++ F +M +DV D+ L +++SAC+ L
Sbjct: 117 RMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL 176
Query: 273 QFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLI 332
G+ +H V+RRG D+S++N L++ Y+K K A LF I K++ISW+T+I
Sbjct: 177 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 236
Query: 333 GGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIE 392
Y+QN EA+ +F +M G +P+ VL +C + LEQGR+ H + + +E
Sbjct: 237 ACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE 296
Query: 393 SDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEM 452
++ V +LVDMY KC S EA VF + ++VVS+ A+I G++ +++ F M
Sbjct: 297 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 356
Query: 453 RV-GFVPPGLLTFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFS 511
+ P + V +LG S + LE +K H +IKYG + F G++L++ YS+C S
Sbjct: 357 LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGS 416
Query: 512 NKDARLVFDEMNQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQ-RPNEFTFAALIT 570
+A VF+ + +D VVW +++ GY + +A++ + ++ S + +PNE TF ++++
Sbjct: 417 LGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILS 476
Query: 571 AASNLGSLKHGQQFHNHLI---KLGLDFDSFITSALIDMYAKCGSLEDAYE 618
A S+ G + G + ++ +L + + + + L+D+ + G L+ A E
Sbjct: 477 ACSHAGLIHEGLRIFKLMVNDYRLAPNLEHY--AVLVDLLGRVGDLDTAIE 525
Score = 210 bits (535), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 241/493 (48%), Gaps = 40/493 (8%)
Query: 32 FSPRNPSLQSFNISTKRSVLAW-----------------------FLQRPLPDNFNN--- 65
FS + Q F TKRS+ W F PDNF
Sbjct: 7 FSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVA 66
Query: 66 -KRITCYKQVHAQIAISG-------LQCDTFLANMLLRNYSKANDLDGARKLFDTMSERN 117
K ++V+ I G L D ++ + L+ Y K + A ++FD + + +
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 118 LVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVG 177
+V+WSS+VS + K G +A+ F + + PD L +++ ACT+L +G
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL----SNSRLG 182
Query: 178 EQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKS 237
+H FVI+ GF D+ + SL+N YAK+ + +A +F + K +SW+T+I YV++
Sbjct: 183 RCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN 242
Query: 238 GRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVI 297
G + +L +FN M + + + VL AC+ + G++ H +R+G+ +V V
Sbjct: 243 GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS 302
Query: 298 NVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEM-TRSGW 356
L+D Y KC + A +F I K+++SW LI G+ N +++ F+ M +
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 362
Query: 357 KPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARK 416
+PD VL SC + LEQ + H+Y K +S+ F+ SLV++Y++C SL A K
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 417 VFDVMADRNVVSYNAMIEGYSKEEKLSEALDLF-HEMRVGFVPPGLLTFVSLLGLSSSVF 475
VF+ +A ++ V + ++I GY K ++AL+ F H ++ V P +TF+S+L S
Sbjct: 423 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 482
Query: 476 SLESSKQIHGLII 488
+ +I L++
Sbjct: 483 LIHEGLRIFKLMV 495
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 180/355 (50%), Gaps = 16/355 (4%)
Query: 74 VHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKKGY 133
VH + G D L N LL Y+K+ A LF ++E++++SWS++++ Y + G
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 134 GEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDV 193
EAL+VF + G P+ +++V+C D G + H I+ G + +V
Sbjct: 245 AAEALLVFNDMMDDGT-EPN---VATVLCVLQACAAAHDLEQ-GRKTHELAIRKGLETEV 299
Query: 194 YVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQM-RE 252
V T+L+++Y K S ++A VF + K VSW +I+G+ +G + S+ F+ M E
Sbjct: 300 KVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 359
Query: 253 TDVVHDKYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKM 312
+ D L+ VL +CS L F+ K H++V++ G + + L++ YS+CG +
Sbjct: 360 NNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 313 ARRLFDEIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGW-KPDDFACSSVLTSCG 371
A ++F+ I +K+ + WT+LI GY + +A++ F M +S KP++ S+L++C
Sbjct: 420 ASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Query: 372 SVEALEQGRQ-----VHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVM 421
+ +G + V+ Y N+E LVD+ + L A ++ M
Sbjct: 480 HAGLIHEGLRIFKLMVNDYRLAPNLEH----YAVLVDLLGRVGDLDTAIEITKRM 530
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 320 bits (820), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 186/628 (29%), Positives = 321/628 (51%), Gaps = 69/628 (10%)
Query: 259 KYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFD 318
K L+ +++ + ++ KQ+HA +R + + ++++ Y+ + A LF
Sbjct: 5 KALIKTLIKNPTRIKSKSQAKQLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLLFK 63
Query: 319 EIEVKNIISWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQ 378
++ +++W ++I + S +A+ F EM SG PD SVL SC + L
Sbjct: 64 TLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF 123
Query: 379 GRQVHAYSFKANIESDNFVKNSLVDMYAKC-------------DSLTE------------ 413
G VH + + ++ D + N+L++MYAK D + +
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 414 -----------ARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLL 462
R+VF+VM ++VVSYN +I GY++ +AL + EM + P
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 463 TFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEM 522
T S+L + S + K+IHG +I+ G+ DV+ GS+L+D Y+K +D+ VF +
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 523 NQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQ 582
RD + WN+++ GY Q EA++L+ +++ ++ +P F+++I A ++L +L G+
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 583 QFHNHLIKLGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHG 642
Q H ++++ G + FI SAL+DMY+KCG+++ A + F D W ++I +A HG
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
Query: 643 EPMKALLLFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAG-FGIEPGMEHY 701
+A+ LF EM +G++PN + FV VL+ACSH GL+++ +F SM +G+ +EHY
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHY 483
Query: 702 ASVVSLLGR--------------------NVW-----------NVELGRYAAEMAISIDP 730
A+V LLGR +VW N+EL AE ++D
Sbjct: 484 AAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDS 543
Query: 731 MDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAGRSWIEVNNEVHAFVARDKSHH 790
+ G+Y L+ N +A N W + ++R +M GL K+ SWIE+ N+ H FV+ D+SH
Sbjct: 544 ENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHP 603
Query: 791 AADLTYSILDNLILHIKGVGYVPNTSAL 818
+ D L ++ ++ GYV +TS +
Sbjct: 604 SMDKINEFLKAVMEQMEKEGYVADTSGV 631
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 237/456 (51%), Gaps = 37/456 (8%)
Query: 199 LMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHD 258
++++Y + +A +F L ++W ++I + +L F +MR + D
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 259 KYLLSSVLSACSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSK---------CGR 309
+ SVL +C+M+ + G+ +H ++R GM D+ N LM+ Y+K G
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 310 V---------------------------KMARRLFDEIEVKNIISWTTLIGGYMQNSFDR 342
V RR+F+ + K+++S+ T+I GY Q+
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 343 EAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDNFVKNSLV 402
+A+++ EM + KPD F SSVL + +G+++H Y + I+SD ++ +SLV
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 403 DMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLL 462
DMYAK + ++ +VF + R+ +S+N+++ GY + + +EAL LF +M V PG +
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 463 TFVSLLGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEM 522
F S++ + + +L KQ+HG +++ G ++F SAL+D YSKC + K AR +FD M
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 523 NQRDIVVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQ 582
N D V W A+++G+ EA+ L+ E+ +PN+ F A++TA S++G +
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAW 464
Query: 583 QFHNHLIKL-GLDFDSFITSALIDMYAKCGSLEDAY 617
+ N + K+ GL+ + +A+ D+ + G LE+AY
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 228/439 (51%), Gaps = 42/439 (9%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
KQ+HAQ I A++++ Y+ L A LF T+ +++W S++ +T +
Sbjct: 25 KQLHAQF-IRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
+AL F+ G PD + SV+ +CT + GE +H F+++ G D
Sbjct: 84 SLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDL----RFGESVHGFIVRLGMDC 138
Query: 192 DVYVGTSLMNLYAK---NGS---------------------------------VDDAKFV 215
D+Y G +LMN+YAK GS +D + V
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 216 FDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFV 275
F+ + K VS+ TII GY +SG + +L + +M TD+ D + LSSVL S V
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 276 GGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGY 335
GK+IH +V+R+G+ DV + + L+D Y+K R++ + R+F + ++ ISW +L+ GY
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 336 MQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFKANIESDN 395
+QN EA++LF +M + KP A SSV+ +C + L G+Q+H Y + S+
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 396 FVKNSLVDMYAKCDSLTEARKVFDVMADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVG 455
F+ ++LVDMY+KC ++ ARK+FD M + VS+ A+I G++ EA+ LF EM+
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 456 FVPPGLLTFVSLLGLSSSV 474
V P + FV++L S V
Sbjct: 439 GVKPNQVAFVAVLTACSHV 457
Score = 199 bits (507), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 189/344 (54%), Gaps = 41/344 (11%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSK-----------------------AND------ 102
+ VH I G+ CD + N L+ Y+K + D
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 103 -------LDGARKLFDTMSERNLVSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDY 155
+D R++F+ M +++VS++++++ Y + G E+AL + + + + +PD +
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRM-VREMGTTDLKPDSF 243
Query: 156 ILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFV 215
LSSV+ ++ G +++H +VI+ G D DVY+G+SL+++YAK+ ++D++ V
Sbjct: 244 TLSSVLPIFSEYVDVIKG----KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 216 FDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFV 275
F L + +SW +++ GYV++GR + +L LF QM V SSV+ AC+ L +
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 276 GGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISWTTLIGGY 335
GKQ+H +VLR G G ++ + + L+D YSKCG +K AR++FD + V + +SWT +I G+
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 419
Query: 336 MQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQG 379
+ EA+ LF EM R G KP+ A +VLT+C V +++
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 141/263 (53%), Gaps = 7/263 (2%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
K++H + G+ D ++ + L+ Y+K+ ++ + ++F + R+ +SW+SLV+ Y +
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
G EAL +F + +P SSVI AC L ++G+Q+H +V++ GF
Sbjct: 322 GRYNEALRLFRQMV-TAKVKPGAVAFSSVIPACAHLA----TLHLGKQLHGYVLRGGFGS 376
Query: 192 DVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGRSDLSLNLFNQMR 251
++++ ++L+++Y+K G++ A+ +FD + V VSWT II G+ G +++LF +M+
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 252 ETDVVHDKYLLSSVLSACSMLQFVGGG-KQIHAHVLRRGMGMDVSVINVLMDFYSKCGRV 310
V ++ +VL+ACS + V ++ G+ ++ + D + G++
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496
Query: 311 KMARRLFDEIEVKNIIS-WTTLI 332
+ A ++ V+ S W+TL+
Sbjct: 497 EEAYNFISKMCVEPTGSVWSTLL 519
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNLVSWSSLVSMYTKK 131
KQ+H + G + F+A+ L+ YSK ++ ARK+FD M+ + VSW++++ +
Sbjct: 363 KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALH 422
Query: 132 GYGEEALMVFIGFLKVGNGRPDDYILSSVICACTQLGGGGDGGNVGEQMHSFVIKSGFDR 191
G+G EA+ +F + G +P+ +V+ AC+ +G + M G ++
Sbjct: 423 GHGHEAVSLFEEMKRQGV-KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY---GLNQ 478
Query: 192 DVYVGTSLMNLYAKNGSVDDA-KFVFDGLMVKTAVSWTTIIT 232
++ ++ +L + G +++A F+ + T W+T+++
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 315 bits (808), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 206/698 (29%), Positives = 341/698 (48%), Gaps = 140/698 (20%)
Query: 180 MHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLMVKTAVSWTTIITGYVKSGR 239
+H+ VIKSGF ++++ L++ Y+K GS++D + VFD + + +W +++TG K G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 240 SDLSLNLFNQMRETD-----------VVHDK--------------------YLLSSVLSA 268
D + +LF M E D HD+ Y +SVLSA
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 269 CSMLQFVGGGKQIHAHVLRRGMGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNIISW 328
CS L + G Q+H+ + + DV + + L+D YSKCG V A+R+FDE+ +N++SW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 329 TTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLTSCGSVEALEQGRQVHAYSFK 388
+LI + QN EA+ +F M S +PD+ +SV+++C S+ A++ G++VH K
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 389 AN-IESDNFVKNSLVDMYAKCDSLTEARKVFDVM-------------------------- 421
+ + +D + N+ VDMYAKC + EAR +FD M
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 422 -----ADRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSVFS 476
A+RNVVS+NA+I GY++ + EAL LF ++ V P +F ++L + +
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 477 LESSKQIHGLIIKYGVFL------DVFAGSALIDAYSKCFSNKDARLVFDEMNQRDIVVW 530
L Q H ++K+G D+F G++LID Y KC ++ LVF +M +RD V W
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Query: 531 NAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNHLIK 590
NAM++G+ Q EA++L+ E+L S ++P+ T +++A + G ++ G+ + + + +
Sbjct: 462 NAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 591 -LGLDFDSFITSALIDMYAKCGSLEDAYETFGSTTWKDVACWNSMICTNAHHGEPMKALL 649
G+ + ++D+ + G LE+A SMI E M
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEA---------------KSMI-------EEMP--- 556
Query: 650 LFREMIIEGLEPNYITFVGVLSACSHAGLIEDGLDHFQSMAGFGIEPGMEHYASVVSLLG 709
++P+ + + +L+AC +
Sbjct: 557 ---------MQPDSVIWGSLLAACK---------------------------------VH 574
Query: 710 RNVWNVELGRYAAEMAISIDPMDSGSYTLLSNTFACNSMWADAKQVRKKMDLDGLMKEAG 769
RN + LG+Y AE + ++P +SG Y LLSN +A W D VRK M +G+ K+ G
Sbjct: 575 RN---ITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPG 631
Query: 770 RSWIEVNNEVHAFVARDKSHHAADLTYSILDNLILHIK 807
SWI++ H F+ +DKSH +S+LD LI ++
Sbjct: 632 CSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 249 bits (635), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 171/576 (29%), Positives = 280/576 (48%), Gaps = 77/576 (13%)
Query: 72 KQVHAQIAISGLQCDTFLANMLLRNYSKANDLDGARKLFDTMSERNL------------- 118
+ VHA + SG + F+ N L+ YSK L+ R++FD M +RN+
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 119 ------------------VSWSSLVSMYTKKGYGEEALMVFIGFLKVGNGRPDDYILSSV 160
+W+S+VS + + EEAL F K G ++Y +SV
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEG-FVLNEYSFASV 158
Query: 161 ICACTQLGGGGDGGNVGEQMHSFVIKSGFDRDVYVGTSLMNLYAKNGSVDDAKFVFDGLM 220
+ AC+ G + N G Q+HS + KS F DVY+G++L+++Y+K G+V+DA+ VFD +
Sbjct: 159 LSACS----GLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 221 VKTAVSWTTIITGYVKSGRSDLSLNLFNQMRETDVVHDKYLLSSVLSACSMLQFVGGGKQ 280
+ VSW ++IT + ++G + +L++F M E+ V D+ L+SV+SAC+ L + G++
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
Query: 281 IHAHVLRRG-MGMDVSVINVLMDFYSKCGRVKMARRLFDEIEVKNII------------- 326
+H V++ + D+ + N +D Y+KC R+K AR +FD + ++N+I
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 327 ------------------SWTTLIGGYMQNSFDREAMKLFTEMTRSGWKPDDFACSSVLT 368
SW LI GY QN + EA+ LF + R P ++ +++L
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 369 SCGSVEALEQGRQV------HAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMA 422
+C + L G Q H + F++ E D FV NSL+DMY KC + E VF M
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 423 DRNVVSYNAMIEGYSKEEKLSEALDLFHEMRVGFVPPGLLTFVSLLGLSSSV-FSLESSK 481
+R+ VS+NAMI G+++ +EAL+LF EM P +T + +L F E
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 482 QIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMN-QRDIVVWNAMLLGYTQQ 540
+ +GV + ++D + ++A+ + +EM Q D V+W + LL +
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGS-LLAACKV 573
Query: 541 LENEEAIKLYLELLLSQQRPNEFTFAALITAASNLG 576
N K E LL + N + L + LG
Sbjct: 574 HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELG 609
Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 188/386 (48%), Gaps = 67/386 (17%)
Query: 380 RQVHAYSFKANIESDNFVKNSLVDMYAKCDSLTEARKVFDVMADRNV------------- 426
R VHA K+ ++ F++N L+D Y+KC SL + R+VFD M RN+
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 427 ------------------VSYNAMIEGYSKEEKLSEALDLFHEM-RVGFVPPGLLTFVSL 467
++N+M+ G+++ ++ EAL F M + GFV +F S+
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV-LNEYSFASV 158
Query: 468 LGLSSSVFSLESSKQIHGLIIKYGVFLDVFAGSALIDAYSKCFSNKDARLVFDEMNQRDI 527
L S + + Q+H LI K DV+ GSAL+D YSKC + DA+ VFDEM R++
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 528 VVWNAMLLGYTQQLENEEAIKLYLELLLSQQRPNEFTFAALITAASNLGSLKHGQQFHNH 587
V WN+++ + Q EA+ ++ +L S+ P+E T A++I+A ++L ++K GQ+ H
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 588 LIKLG-LDFDSFITSALIDMYAKCGSLEDAYETFGS------------------------ 622
++K L D +++A +DMYAKC +++A F S
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 623 -------TTWKDVACWNSMICTNAHHGEPMKALLLFREMIIEGLEPNYITFVGVLSACSH 675
++V WN++I +GE +AL LF + E + P + +F +L AC+
Sbjct: 339 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 398
Query: 676 AGLIEDGLD-HFQSMA-GFGIEPGME 699
+ G+ H + GF + G E
Sbjct: 399 LAELHLGMQAHVHVLKHGFKFQSGEE 424
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 294,228,251
Number of Sequences: 539616
Number of extensions: 12293214
Number of successful extensions: 39538
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 27770
Number of HSP's gapped (non-prelim): 2943
length of query: 819
length of database: 191,569,459
effective HSP length: 126
effective length of query: 693
effective length of database: 123,577,843
effective search space: 85639445199
effective search space used: 85639445199
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)