Query 039797
Match_columns 437
No_of_seqs 81 out of 83
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 23:10:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039797.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039797hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ap3a1 a.24.27.1 (A:12-196) H 37.4 72 0.0052 23.4 16.9 16 100-115 6-21 (185)
2 d1fxka_ a.2.5.1 (A:) Prefoldin 35.1 35 0.0025 26.1 5.9 22 159-180 20-41 (107)
3 d2ap3a1 a.24.27.1 (A:12-196) H 34.3 81 0.0059 23.1 14.1 24 101-124 17-40 (185)
4 d1dxxa1 a.40.1.1 (A:9-119) Dys 31.0 13 0.00097 28.5 2.7 17 304-320 7-23 (111)
5 d1wiia_ g.41.3.4 (A:) Hypothet 30.1 9.3 0.00067 29.6 1.5 10 309-318 70-79 (85)
6 d2oa5a1 d.362.1.1 (A:7-102) Un 29.8 33 0.0024 27.0 4.8 24 243-266 4-27 (96)
7 d1v54j_ f.23.4.1 (J:) Mitochon 26.6 14 0.001 26.7 2.0 25 10-35 16-48 (58)
8 d1f5na1 a.114.1.1 (A:284-583) 24.8 1.8E+02 0.013 24.0 14.4 33 142-174 199-231 (300)
9 d1aoaa2 a.40.1.1 (A:260-375) F 24.7 17 0.0012 27.7 2.2 12 309-320 13-24 (116)
10 d1aoaa1 a.40.1.1 (A:121-251) F 24.5 11 0.00079 30.2 1.0 19 302-320 1-19 (131)
11 d1fxkc_ a.2.5.1 (C:) Prefoldin 21.1 1E+02 0.0074 23.6 6.5 45 147-191 1-45 (133)
No 1
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=37.43 E-value=72 Score=23.42 Aligned_cols=16 Identities=25% Similarity=0.366 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHHHH
Q 039797 100 EILNLRFQIEELQKRE 115 (437)
Q Consensus 100 EI~~Lr~lVeeLqERE 115 (437)
+|..+...+..+.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~ 21 (185)
T d2ap3a1 6 EIKAYLKQVDKIKDDE 21 (185)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444444333
No 2
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=35.11 E-value=35 Score=26.08 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 039797 159 VESENKRLENLVVLYLKVLDQL 180 (437)
Q Consensus 159 LEsEn~rL~~~v~e~~~v~~EL 180 (437)
+.+....|.+++.++..+..+|
T Consensus 20 ~~~q~~~le~q~~E~~~vl~eL 41 (107)
T d1fxka_ 20 ISVQKQTVEMQINETQKALEEL 41 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333
No 3
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=34.27 E-value=81 Score=23.10 Aligned_cols=24 Identities=17% Similarity=0.080 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 039797 101 ILNLRFQIEELQKRELETKMQFAR 124 (437)
Q Consensus 101 I~~Lr~lVeeLqERE~~LE~eLLE 124 (437)
+..+...+..+..+=..++.++..
T Consensus 17 ~~~~~~~~~~~~~k~~~~e~~~~~ 40 (185)
T d2ap3a1 17 IKDDEEPIKTVGKKIAELDEKKKK 40 (185)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444444444433
No 4
>d1dxxa1 a.40.1.1 (A:9-119) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.00 E-value=13 Score=28.53 Aligned_cols=17 Identities=18% Similarity=0.585 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 039797 304 EAKELIYLRWANACLRH 320 (437)
Q Consensus 304 eVEELVYLRWvNACLR~ 320 (437)
+|.+-+|.||||..|..
T Consensus 7 ~~Q~~~ft~WiN~~L~~ 23 (111)
T d1dxxa1 7 DVQKKTFTKWVNAQFSK 23 (111)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccc
Confidence 45667899999999963
No 5
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.12 E-value=9.3 Score=29.62 Aligned_cols=10 Identities=40% Similarity=1.172 Sum_probs=7.9
Q ss_pred HHHHHHHHHH
Q 039797 309 IYLRWANACL 318 (437)
Q Consensus 309 VYLRWvNACL 318 (437)
||=.||.||-
T Consensus 70 VYs~WiDace 79 (85)
T d1wiia_ 70 VYSDWIDACE 79 (85)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7888888884
No 6
>d2oa5a1 d.362.1.1 (A:7-102) Uncharacterized protein BQLF2 {Murid herpesvirus 4 [TaxId: 33708]}
Probab=29.78 E-value=33 Score=26.98 Aligned_cols=24 Identities=21% Similarity=0.398 Sum_probs=19.4
Q ss_pred HHHHHHHhHHHHHHHHHHHHhHHH
Q 039797 243 LKELHSVIDQLQEQNSELLNKLQE 266 (437)
Q Consensus 243 v~ELrr~nk~LQ~EK~eL~~kL~~ 266 (437)
|+||-....+||.||..|-.+|-.
T Consensus 4 ~EeLaaeL~rL~~ENk~LKkkl~~ 27 (96)
T d2oa5a1 4 YEEMVKEVERLKLENKTLKQKVKS 27 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 567778888999999999999976
No 7
>d1v54j_ f.23.4.1 (J:) Mitochondrial cytochrome c oxidase subunit VIIa {Cow (Bos taurus) [TaxId: 9913]}
Probab=26.64 E-value=14 Score=26.71 Aligned_cols=25 Identities=24% Similarity=0.412 Sum_probs=19.2
Q ss_pred cccchhhhhcch--------hHHHHHhHHHHHHH
Q 039797 10 AIIKPVLLKAGV--------PLAISVAGFICAKM 35 (437)
Q Consensus 10 ~~~kp~~lk~g~--------~lalS~ag~i~ar~ 35 (437)
+. .||+||-|+ ..+|.++|.+|+=+
T Consensus 16 ~g-~PVhLKGG~~D~~LYr~Tm~L~~~G~~~s~~ 48 (58)
T d1v54j_ 16 NG-LPVHLKGGATDNILYRVTMTLCLGGTLYSLY 48 (58)
T ss_dssp SC-CCTTTTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-ceEEecCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 44 699999985 47888899888744
No 8
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.80 E-value=1.8e+02 Score=24.04 Aligned_cols=33 Identities=12% Similarity=0.076 Sum_probs=14.2
Q ss_pred hHhhhhHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 039797 142 IFLEKSYVELLDREVSSVESENKRLENLVVLYL 174 (437)
Q Consensus 142 L~~k~~Ei~~L~~kI~sLEsEn~rL~~~v~e~~ 174 (437)
+.....++.........++.+...++.......
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 231 (300)
T d1f5na1 199 LTEKEKEIEVERVKAESAQASAKMLHEMQRKNE 231 (300)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333344444444444444444444444433
No 9
>d1aoaa2 a.40.1.1 (A:260-375) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.73 E-value=17 Score=27.73 Aligned_cols=12 Identities=50% Similarity=0.941 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHH
Q 039797 309 IYLRWANACLRH 320 (437)
Q Consensus 309 VYLRWvNACLR~ 320 (437)
++|||||..|+.
T Consensus 13 ~lL~WvN~~l~~ 24 (116)
T d1aoaa2 13 LLLRWANFHLEN 24 (116)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc
Confidence 799999999753
No 10
>d1aoaa1 a.40.1.1 (A:121-251) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.48 E-value=11 Score=30.17 Aligned_cols=19 Identities=21% Similarity=0.601 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 039797 302 AAEAKELIYLRWANACLRH 320 (437)
Q Consensus 302 ~seVEELVYLRWvNACLR~ 320 (437)
|++-|+=+|.+|||..|+.
T Consensus 1 y~e~ek~~f~~WiN~~L~~ 19 (131)
T d1aoaa1 1 YSEEEKYAFVNWINKALEN 19 (131)
T ss_dssp CCHHHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHHHHhcc
Confidence 3566778899999998865
No 11
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=21.13 E-value=1e+02 Score=23.63 Aligned_cols=45 Identities=4% Similarity=0.057 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039797 147 SYVELLDREVSSVESENKRLENLVVLYLKVLDQLQQWKSESGLLK 191 (437)
Q Consensus 147 ~Ei~~L~~kI~sLEsEn~rL~~~v~e~~~v~~ELe~ar~ki~~Lq 191 (437)
+.+..|...+.-|+.+-..|++++..+.....+++.++.-++.|.
T Consensus 1 a~L~eL~~~~~~l~~~l~~l~~~i~~l~~~~~e~~~~~~~L~~l~ 45 (133)
T d1fxkc_ 1 AALAEIVAQLNIYQSQVELIQQQMEAVRATISELEILEKTLSDIQ 45 (133)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Done!