Query 039804
Match_columns 95
No_of_seqs 109 out of 1016
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 23:17:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039804.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039804hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aqu_A EST, estrogen sulfotran 99.8 2.9E-21 9.8E-26 137.4 6.7 86 1-91 210-296 (297)
2 1ls6_A ARYL sulfotransferase; 99.8 8.5E-21 2.9E-25 134.4 6.3 86 1-91 208-294 (295)
3 2reo_A Putative sulfotransfera 99.8 1.1E-20 3.6E-25 134.8 6.2 86 1-91 218-304 (305)
4 3ckl_A Sulfotransferase family 99.8 1.4E-20 4.8E-25 133.7 6.7 86 1-91 211-297 (298)
5 1fmj_A Retinol dehydratase; su 99.8 1.6E-20 5.3E-25 136.7 6.5 83 1-88 263-346 (351)
6 2zpt_X Tyrosine-ester sulfotra 99.8 1E-20 3.5E-25 134.2 5.3 86 1-91 208-294 (295)
7 2gwh_A Sulfotransferase 1C2; s 99.8 1.5E-20 5.1E-25 133.6 5.7 86 1-91 211-297 (298)
8 3bfx_A Sulfotransferase 1C2; P 99.8 1.4E-20 4.9E-25 133.5 4.7 86 1-91 209-295 (296)
9 1j99_A Alcohol sulfotransferas 99.8 4.8E-20 1.6E-24 130.4 6.2 83 1-89 207-291 (293)
10 1q20_A SULT2B1B, sulfotransfer 99.8 4.2E-20 1.4E-24 131.2 5.6 85 1-91 212-297 (299)
11 1q44_A RARO47, steroid sulfotr 99.8 9.1E-21 3.1E-25 136.5 2.1 82 1-89 243-325 (326)
12 3mgb_A TEG12; sulfotransferase 99.8 2E-19 6.8E-24 129.9 3.5 80 1-85 216-306 (319)
13 1q1q_A SULT2B1A, sulfotransfer 99.7 8.1E-19 2.8E-23 127.6 5.2 86 1-92 210-296 (350)
14 2ov8_A STAL; sulfotransferase, 99.7 2.6E-18 9E-23 121.7 1.3 75 1-85 196-275 (288)
15 1zd1_A Sulfotransferase 4A1; S 99.7 4.6E-17 1.6E-21 114.8 4.8 73 1-91 211-283 (284)
16 3ap1_A Protein-tyrosine sulfot 98.2 2E-07 6.7E-12 66.9 -0.3 36 51-87 269-304 (337)
17 4gox_A Polyketide synthase; ol 97.0 4E-05 1.4E-09 53.3 -2.3 40 50-90 267-306 (313)
18 1t8t_A Heparan sulfate D-gluco 95.2 0.006 2.1E-07 41.6 1.3 32 50-82 226-257 (271)
19 4gbm_A CURM sulfotransferase; 95.2 0.0021 7.3E-08 44.7 -1.0 33 50-82 275-307 (323)
20 3o39_A Periplasmic protein rel 68.6 3.6 0.00012 24.8 2.5 22 60-81 86-107 (108)
21 2ecc_A Homeobox and leucine zi 61.4 10 0.00035 21.3 3.4 25 56-80 1-25 (76)
22 3itf_A Periplasmic adaptor pro 58.0 8.1 0.00028 24.4 2.8 24 60-83 114-137 (145)
23 2hw2_A Rifampin ADP-ribosyl tr 50.9 13 0.00044 23.6 2.7 25 55-80 109-133 (143)
24 3oeo_A Spheroplast protein Y; 45.7 7.8 0.00027 24.1 1.2 25 59-83 101-125 (138)
25 2zq5_A Putative uncharacterize 43.2 7.1 0.00024 27.8 0.8 25 1-30 332-356 (384)
26 1yya_A Triosephosphate isomera 41.3 24 0.00084 24.2 3.2 36 57-92 6-43 (250)
27 1bw5_A ISL-1HD, insulin gene e 36.4 34 0.0012 17.9 2.8 19 62-80 7-25 (66)
28 3a02_A Homeobox protein arista 36.3 31 0.0011 17.6 2.6 19 62-80 3-21 (60)
29 1k61_A Mating-type protein alp 35.1 38 0.0013 17.3 2.8 19 62-80 2-20 (60)
30 2dmu_A Homeobox protein goosec 34.2 38 0.0013 17.9 2.8 20 61-80 10-29 (70)
31 2dn0_A Zinc fingers and homeob 34.2 37 0.0013 18.3 2.8 19 62-80 12-30 (76)
32 1ig7_A Homeotic protein MSX-1; 34.1 40 0.0014 17.0 2.8 19 62-80 4-22 (58)
33 2hdd_A Protein (engrailed home 33.7 41 0.0014 17.3 2.8 19 62-80 7-25 (61)
34 2jgq_A Triosephosphate isomera 33.7 42 0.0014 22.8 3.4 36 57-92 4-42 (233)
35 1jgg_A Segmentation protein EV 32.8 43 0.0015 17.1 2.8 19 62-80 5-23 (60)
36 2da1_A Alpha-fetoprotein enhan 32.7 42 0.0014 17.7 2.8 19 62-80 11-29 (70)
37 2dmq_A LIM/homeobox protein LH 32.7 40 0.0014 18.3 2.8 20 61-80 10-29 (80)
38 1wh5_A ZF-HD homeobox family p 32.4 41 0.0014 18.6 2.8 19 61-79 20-38 (80)
39 2da4_A Hypothetical protein DK 32.1 28 0.00096 19.0 2.0 19 62-80 12-30 (80)
40 2da2_A Alpha-fetoprotein enhan 32.0 43 0.0015 17.6 2.8 20 61-80 10-29 (70)
41 3fbi_A Mediator of RNA polymer 31.7 41 0.0014 19.3 2.7 27 48-83 16-42 (84)
42 1akh_A Protein (mating-type pr 31.7 39 0.0013 17.3 2.5 19 62-80 9-27 (61)
43 2y39_A Nickel and cobalt resis 31.0 10 0.00035 23.3 -0.0 26 58-83 90-115 (118)
44 2cra_A Homeobox protein HOX-B1 30.7 46 0.0016 17.6 2.7 19 62-80 11-29 (70)
45 2h6r_A Triosephosphate isomera 30.5 28 0.00096 22.9 2.1 37 57-93 3-43 (219)
46 2vi6_A Homeobox protein nanog; 30.1 48 0.0016 17.0 2.7 19 62-80 7-25 (62)
47 2dmt_A Homeobox protein BARH-l 30.0 47 0.0016 18.1 2.8 21 60-80 19-39 (80)
48 1aw2_A Triosephosphate isomera 29.9 49 0.0017 22.7 3.3 36 57-92 6-44 (256)
49 2e1o_A Homeobox protein PRH; D 29.7 50 0.0017 17.4 2.8 19 62-80 11-29 (70)
50 1b9b_A TIM, protein (triosepho 29.6 50 0.0017 22.7 3.3 36 57-92 7-45 (255)
51 1tre_A Triosephosphate isomera 29.5 50 0.0017 22.7 3.3 36 57-92 6-44 (255)
52 1ahd_P Antennapedia protein mu 29.5 51 0.0017 17.4 2.8 19 62-80 6-24 (68)
53 2ly9_A Zinc fingers and homeob 28.3 54 0.0018 17.4 2.8 20 61-80 9-28 (74)
54 2dms_A Homeobox protein OTX2; 27.6 57 0.0019 17.7 2.8 20 61-80 10-29 (80)
55 1r2r_A TIM, triosephosphate is 27.4 46 0.0016 22.8 2.8 36 57-92 8-45 (248)
56 2cuf_A FLJ21616 protein; homeo 27.1 55 0.0019 18.5 2.8 18 62-79 11-28 (95)
57 2djn_A Homeobox protein DLX-5; 27.0 41 0.0014 17.8 2.1 19 61-79 10-28 (70)
58 1ney_A TIM, triosephosphate is 26.6 49 0.0017 22.6 2.8 36 57-92 6-43 (247)
59 2vxn_A Triosephosphate isomera 26.6 50 0.0017 22.6 2.9 36 57-92 9-46 (251)
60 2nsc_A Trigger factor, TF; cha 26.2 20 0.00068 21.1 0.7 33 53-86 44-83 (109)
61 2cki_A Ulilysin; metalloprotea 25.6 44 0.0015 22.9 2.4 17 62-78 238-254 (262)
62 1gks_A Cytochrome C551; haloph 25.6 51 0.0017 17.4 2.3 22 59-80 56-77 (78)
63 2hi3_A Homeodomain-only protei 25.6 81 0.0028 16.7 3.2 21 59-79 3-23 (73)
64 2l7z_A Homeobox protein HOX-A1 25.6 61 0.0021 17.3 2.6 20 61-80 10-29 (73)
65 2h1k_A IPF-1, pancreatic and d 25.4 77 0.0026 16.3 3.0 20 61-80 6-25 (63)
66 2j27_A Triosephosphate isomera 25.2 50 0.0017 22.6 2.7 36 57-92 8-45 (250)
67 1fjl_A Paired protein; DNA-bin 24.5 69 0.0023 17.4 2.8 21 60-80 20-40 (81)
68 1uhs_A HOP, homeodomain only p 24.5 66 0.0023 17.0 2.6 18 62-79 5-22 (72)
69 2da3_A Alpha-fetoprotein enhan 24.1 32 0.0011 18.7 1.2 20 61-80 20-39 (80)
70 1ftt_A TTF-1 HD, thyroid trans 24.0 75 0.0026 16.6 2.8 19 62-80 6-24 (68)
71 2i9e_A Triosephosphate isomera 24.0 58 0.002 22.4 2.8 25 57-81 7-31 (259)
72 1mnm_C Protein (MAT alpha-2 tr 23.7 71 0.0024 17.6 2.8 19 62-80 31-49 (87)
73 2kt0_A Nanog, homeobox protein 23.2 75 0.0026 17.3 2.8 21 60-80 24-44 (84)
74 3ta6_A Triosephosphate isomera 23.2 74 0.0025 22.0 3.2 27 57-83 7-33 (267)
75 1nk2_P Homeobox protein VND; h 23.2 76 0.0026 17.1 2.8 19 62-80 13-31 (77)
76 1mo0_A TIM, triosephosphate is 23.2 61 0.0021 22.6 2.8 31 53-83 22-53 (275)
77 1x2n_A Homeobox protein pknox1 23.0 78 0.0027 16.7 2.8 19 62-80 11-29 (73)
78 3rkq_A Homeobox protein NKX-2. 22.9 57 0.002 16.2 2.1 18 62-79 6-23 (58)
79 1puf_A HOX-1.7, homeobox prote 22.7 79 0.0027 17.0 2.8 21 60-80 15-35 (77)
80 2cue_A Paired box protein PAX6 22.6 53 0.0018 17.9 2.0 18 62-79 11-28 (80)
81 2btm_A TIM, protein (triosepho 22.6 52 0.0018 22.6 2.3 26 57-82 5-30 (252)
82 1ayg_A Cytochrome C-552; elect 22.4 83 0.0028 16.4 2.8 16 64-79 63-78 (80)
83 2yc6_A Triosephosphate isomera 22.1 63 0.0022 22.2 2.7 36 57-92 8-45 (257)
84 2k40_A Homeobox expressed in E 22.0 59 0.002 16.9 2.1 18 62-79 5-22 (67)
85 1zq3_P PRD-4, homeotic bicoid 22.0 59 0.002 17.0 2.1 18 62-79 6-23 (68)
86 4g1k_A Triosephosphate isomera 21.9 69 0.0024 22.2 2.9 29 53-81 25-54 (272)
87 1wh7_A ZF-HD homeobox family p 21.8 88 0.003 17.2 2.9 20 60-80 19-38 (80)
88 1o5x_A TIM, triosephosphate is 21.4 56 0.0019 22.3 2.3 26 57-82 7-32 (248)
89 1cch_A Cytochrome C551; electr 21.4 89 0.0031 16.1 2.8 16 64-79 65-80 (82)
90 2dmn_A Homeobox protein TGIF2L 21.4 87 0.003 17.2 2.8 19 62-80 11-29 (83)
91 3bd9_A Heparan sulfate glucosa 21.4 79 0.0027 21.0 3.1 30 52-82 238-267 (280)
92 3fxd_A Protein ICMQ; helix bun 21.2 75 0.0026 16.9 2.3 21 62-82 2-22 (57)
93 1m6j_A TIM, TPI, triosephospha 21.2 63 0.0021 22.2 2.5 22 57-78 8-29 (261)
94 2d3o_1 Trigger factor, TF; rib 20.8 51 0.0017 19.3 1.8 34 53-86 43-84 (112)
95 2l48_A N-acetylmuramoyl-L-alan 20.4 86 0.0029 18.0 2.6 18 63-80 61-78 (85)
96 3a03_A T-cell leukemia homeobo 20.2 87 0.003 15.6 2.5 17 64-80 3-19 (56)
No 1
>1aqu_A EST, estrogen sulfotransferase; PAP, sulfonation, 17-beta estradiol, steroid-binding; HET: A3P EST; 1.60A {Mus musculus} SCOP: c.37.1.5 PDB: 1aqy_A* 1bo6_A* 1hy3_A* 1g3m_A*
Probab=99.84 E-value=2.9e-21 Score=137.40 Aligned_cols=86 Identities=27% Similarity=0.414 Sum_probs=70.4
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhhHhh-ccccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHh
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNLEVT-KSRINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~-~~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|+|||+++++++ +++|+++|||++||++..+ ....+..........|+|||+||+||++||++|++++++++++
T Consensus 210 ~~FLG~~~~~~~-----l~~iv~~~sf~~mk~~~~~~~~~~~~~~~~~~~~~f~RkG~~GdWk~~lt~e~~~~~~~~~~~ 284 (297)
T 1aqu_A 210 IEFLERKPSAEL-----VDRIIQHTSFQEMKNNPSTNYTMMPEEMMNQKVSPFMRKGIIGDWKNHFPEALRERFDEHYKQ 284 (297)
T ss_dssp HHHTTCCCCHHH-----HHHHHHHTSHHHHHHCTTTTTTTSCTTTBCTTTSCSSCCCCSCGGGGTCCHHHHHHHHHHHHH
T ss_pred HHHcCCCCCHHH-----HHHHHHhCCHHHHHhchhccccccchhhhcccccceeeCCCCCCCccCCCHHHHHHHHHHHHH
Confidence 579999999998 9999999999999987533 2222111112345679999999999999999999999999999
Q ss_pred HhCCCCceeecc
Q 039804 80 KFKDSGFVTLKM 91 (95)
Q Consensus 80 ~l~~~~l~f~~~ 91 (95)
+|+++|++|...
T Consensus 285 ~l~~~g~~f~~~ 296 (297)
T 1aqu_A 285 QMKDCTVKFRME 296 (297)
T ss_dssp HHTTCCCCCCCC
T ss_pred HhcCCCCccccC
Confidence 999999998643
No 2
>1ls6_A ARYL sulfotransferase; SULT 1A1, PAP, P-nitrophenol, positive cooperativity, two substrate binding sites; HET: A3P NPO; 1.90A {Homo sapiens} SCOP: c.37.1.5 PDB: 2d06_A* 3u3o_A* 3u3k_A* 3u3m_A* 3u3j_A* 3u3r_A* 1z28_A* 3qvv_A* 3qvu_A* 1z29_A* 1cjm_A 2a3r_A*
Probab=99.82 E-value=8.5e-21 Score=134.42 Aligned_cols=86 Identities=20% Similarity=0.326 Sum_probs=70.3
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhhHhh-ccccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHh
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNLEVT-KSRINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~-~~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|+|||++++++. ++.|+++|||++||++..+ ....+..........|+|||.+|+||++||++|++++++++++
T Consensus 208 ~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~~~~~~~~~~~~f~RkG~~g~Wk~~lt~e~~~~~~~~~~~ 282 (295)
T 1ls6_A 208 LEFVGHSLPEET-----VDFMVQHTSFKEMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVAQNERFDADYAE 282 (295)
T ss_dssp HHHHTCCCCHHH-----HHHHHHHTSHHHHHHCTTTSCTTSCTTTBCTTTCCSSCCCCSSGGGGTSCHHHHHHHHHHHHH
T ss_pred HHHhCCCCCHHH-----HHHHHHHCCHHHHhhchhhcccccchhhccccccceeECCCCCCCcccCCHHHHHHHHHHHHH
Confidence 479999999988 9999999999999987533 2222111112234679999999999999999999999999999
Q ss_pred HhCCCCceeecc
Q 039804 80 KFKDSGFVTLKM 91 (95)
Q Consensus 80 ~l~~~~l~f~~~ 91 (95)
+|+++|++|...
T Consensus 283 ~l~~~g~~f~~~ 294 (295)
T 1ls6_A 283 KMAGCSLSFRSE 294 (295)
T ss_dssp HTTTCCCCCCSC
T ss_pred HhCCCCCccccC
Confidence 999999998654
No 3
>2reo_A Putative sulfotransferase 1C3; sulfate conjugation, PAP, structural genom consortium, SGC; HET: A3P; 2.65A {Homo sapiens} PDB: 2h8k_A*
Probab=99.82 E-value=1.1e-20 Score=134.80 Aligned_cols=86 Identities=22% Similarity=0.325 Sum_probs=69.6
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhhHhh-ccccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHh
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNLEVT-KSRINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~-~~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|+|||++++++. +++|+++|||++||++..+ ....+..........|+|||.||+||+|||++|++++++++++
T Consensus 218 ~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~~~~~~~~~~~~f~RkG~vgdWk~~lt~e~~~~~~~~~~~ 292 (305)
T 2reo_A 218 LKFLEKDISEEI-----LNKIIYHTSFDVMKQNPMTNYTTLPTSIMDHSISPFMRKGMPGDWKNYFTVAQNEEFDKDYQK 292 (305)
T ss_dssp HHHHTCCCCHHH-----HHHHHHHTSHHHHHTCTTTSSCSSCTTTBCTTTCCSSCCCCTTGGGGTCCHHHHHHHHHHHHH
T ss_pred HHHcCCCCCHHH-----HHHHHHhCCHHHHHhhhhhcccccccccccccccceeeCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 479999999998 9999999999999987543 2222111112345679999999999999999999999999999
Q ss_pred HhCCCCceeecc
Q 039804 80 KFKDSGFVTLKM 91 (95)
Q Consensus 80 ~l~~~~l~f~~~ 91 (95)
+|+++|+.|...
T Consensus 293 ~l~~~g~~f~~~ 304 (305)
T 2reo_A 293 KMAGSTLTFRTE 304 (305)
T ss_dssp HCC-CCCCCCSC
T ss_pred HhcCCCCccccC
Confidence 999999998654
No 4
>3ckl_A Sulfotransferase family cytosolic 1B member 1; SULT1B1, human cytosolic sulfotransferase, resveratrol, SGC, cytoplasm, lipid metabolism; HET: STL A3P; 2.00A {Homo sapiens} PDB: 2z5f_A*
Probab=99.82 E-value=1.4e-20 Score=133.67 Aligned_cols=86 Identities=20% Similarity=0.388 Sum_probs=70.1
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhhHhhc-cccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHh
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNLEVTK-SRINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~~-~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|+|||++++++. +++|+++|||++||++..+. ...+..........|+|||.+|+||+|||++|++++++++++
T Consensus 211 ~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~~~~~~~~~~~~f~RkG~~g~Wk~~lt~e~~~~~~~~~~~ 285 (298)
T 3ckl_A 211 IRFLEKNLNDEI-----LDRIIHHTSFEVMKDNPLVNYTHLPTTVMDHSKSPFMRKGTAGDWKNYFTVAQNEKFDAIYET 285 (298)
T ss_dssp HHHTTCCCCHHH-----HHHHHHHTSHHHHHTCTTTSSTTSBTTTBCTTTCCSSCCCCSSGGGGTCCHHHHHHHHHHHHH
T ss_pred HHHcCCCCCHHH-----HHHHHHHCCHHHHhhchhhccccccchhccccccceeeCCCCCCccccCCHHHHHHHHHHHHH
Confidence 479999999998 99999999999999875332 221111112234679999999999999999999999999999
Q ss_pred HhCCCCceeecc
Q 039804 80 KFKDSGFVTLKM 91 (95)
Q Consensus 80 ~l~~~~l~f~~~ 91 (95)
+|+++|++|...
T Consensus 286 ~l~~~g~~f~~~ 297 (298)
T 3ckl_A 286 EMSKTALQFRTE 297 (298)
T ss_dssp HHTTSSCCCCSC
T ss_pred HhCCCCCccccC
Confidence 999999998643
No 5
>1fmj_A Retinol dehydratase; sulfotransferase, adenosine 3',5'- diphosphate; HET: A3P RTL; 2.00A {Spodoptera frugiperda} SCOP: c.37.1.5 PDB: 1fml_A* 1x8l_A* 1x8k_A* 1x8j_A*
Probab=99.82 E-value=1.6e-20 Score=136.74 Aligned_cols=83 Identities=23% Similarity=0.508 Sum_probs=69.9
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhh-HhhccccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHh
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNL-EVTKSRINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~-~~~~~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|+|||++++++. +++|+++|||++||++ .+|....+..........|+|||.||+||+|||++|++++++++++
T Consensus 263 ~~FLG~~~~~~~-----l~~iv~~~Sf~~mk~~~~~n~~~~~~~~~~~~~~~f~RKG~vGdWkn~~t~e~~~~~d~~~~e 337 (351)
T 1fmj_A 263 ADFLGKKLSEEQ-----IQRLCEHLNFEKFKNNGAVNMEDYREIGILADGEHFIRKGKAGCWRDYFDEEMTKQAEKWIKD 337 (351)
T ss_dssp HHHTTCCCCHHH-----HHHHHHHTCHHHHHTCTTTSCGGGTTTTCSCTTCCSSCCCCSSGGGGTCCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCHHH-----HHHHHHhcCHHHHhhchhhccccccccccccccchhccCCCCCCCccCCCHHHHHHHHHHHHH
Confidence 579999999998 9999999999999987 4555433210111245679999999999999999999999999999
Q ss_pred HhCCCCcee
Q 039804 80 KFKDSGFVT 88 (95)
Q Consensus 80 ~l~~~~l~f 88 (95)
+|+++|+.|
T Consensus 338 ~l~~~gy~f 346 (351)
T 1fmj_A 338 NLKDTDLRY 346 (351)
T ss_dssp HTTTSCCCC
T ss_pred HhccCCCcc
Confidence 999999998
No 6
>2zpt_X Tyrosine-ester sulfotransferase; SULT1D1, catecholamine, sulfonation; HET: A3P GOL; 1.15A {Mus musculus} PDB: 2zvp_X* 2zvq_X* 2zyt_X* 2zyu_X* 2zyv_X* 2zyw_X*
Probab=99.81 E-value=1e-20 Score=134.19 Aligned_cols=86 Identities=20% Similarity=0.326 Sum_probs=70.0
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhhHhh-ccccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHh
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNLEVT-KSRINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~-~~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|+|||++++++. +++|+++|||++||++..+ ....+..........|+|||.||+||+|||++|++++++++++
T Consensus 208 ~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~~~~~~~~~~~~f~RkG~vG~Wk~~lt~e~~~~~~~~~~~ 282 (295)
T 2zpt_X 208 LKFLEKDIPEEI-----LNKILYHSSFSVMKENPSANYTTMMKEEMDHSVSPFMRKGISGDWKNQFTVAQYEKFEEDYVK 282 (295)
T ss_dssp HHHTTCCCCHHH-----HHHHHHHTSHHHHHHCTTTSSTTSCTTTBCTTTSCSSCCCCSCTHHHHCCHHHHHHHHHHHHH
T ss_pred HHHcCCCCCHHH-----HHHHHHHCCHHHHHhchhhcccccccccccccccceeeCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 479999999998 9999999999999987533 2222111112245679999999999999999999999999999
Q ss_pred HhCCCCceeecc
Q 039804 80 KFKDSGFVTLKM 91 (95)
Q Consensus 80 ~l~~~~l~f~~~ 91 (95)
+|+++|++|...
T Consensus 283 ~l~~~g~~f~~~ 294 (295)
T 2zpt_X 283 KMEDSTLKFRSE 294 (295)
T ss_dssp HHTTSSCCCCC-
T ss_pred HhCCCCCccccC
Confidence 999999998643
No 7
>2gwh_A Sulfotransferase 1C2; sulfate conjugation, pentachlorophenol, PA pesticide, structural genomics, structural genomics consort transferase; HET: A3P PCI; 1.80A {Homo sapiens} PDB: 2ad1_A*
Probab=99.81 E-value=1.5e-20 Score=133.55 Aligned_cols=86 Identities=23% Similarity=0.400 Sum_probs=68.3
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhhHhhcc-ccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHh
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNLEVTKS-RINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~~~-~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|+|||++++++. ++.|+++|||++||++..+.. ..+..........|+|||.||+||+|||++|++++++++++
T Consensus 211 ~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~~~~~~~~~~~~f~RkG~vg~Wk~~lt~e~~~~~~~~~~~ 285 (298)
T 2gwh_A 211 AEFIGKKLDDKV-----LDKIVHYTSFDVMKQNPMANYSSIPAEIMDHSISPFMRKGAVGDWKKHFTVAQNERFDEDYKK 285 (298)
T ss_dssp HHHHTCCCCHHH-----HHHHHHHTSHHHHHTCTTTSSTTSCTTTBCTTTSCSSCCCCSSGGGGTCBHHHHHHHHHHHHH
T ss_pred HHHcCCCCCHHH-----HHHHHHhCCHHHHHhchhhcccccchhhhcccccceeeCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 479999999998 999999999999998754322 22111112345679999999999999999999999999999
Q ss_pred HhCCCCceeecc
Q 039804 80 KFKDSGFVTLKM 91 (95)
Q Consensus 80 ~l~~~~l~f~~~ 91 (95)
+|+++|+.|...
T Consensus 286 ~l~~~g~~f~~~ 297 (298)
T 2gwh_A 286 KMTDTRLTFHFQ 297 (298)
T ss_dssp HCC--GGGGGCC
T ss_pred HhCCCCCccccC
Confidence 999999998654
No 8
>3bfx_A Sulfotransferase 1C2; PAP, structural genomics, PSI, protein structure initiative, structural genomics consortium, SGC, alternative splicing; HET: A3P; 1.80A {Homo sapiens} SCOP: c.37.1.5
Probab=99.81 E-value=1.4e-20 Score=133.50 Aligned_cols=86 Identities=24% Similarity=0.457 Sum_probs=64.5
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhhHhh-ccccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHh
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNLEVT-KSRINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~-~~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|+|||++++++. ++.|+++|||++||++..+ ....+..........|+|||.||+||+|||++|++++++++++
T Consensus 209 ~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~~~~~~~~~~~~f~RkG~vg~Wk~~lt~e~~~~~~~~~~~ 283 (296)
T 3bfx_A 209 MQFMGKKVDETV-----LDKIVQETSFEKMKENPMTNRSTVSKSILDQSISSFMRKGTVGDWKNHFTVAQNERFDEIYRR 283 (296)
T ss_dssp HHHTTCCCCHHH-----HHHHHHHTSHHHHHHC-------------------CCCCCCSCTHHHHCCHHHHHHHHHHHHH
T ss_pred HHHhCCCCCHHH-----HHHHHHHCCHHHHHhchhhccccccccccccccccceeCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 479999999998 9999999999999987543 2221101112245679999999999999999999999999999
Q ss_pred HhCCCCceeecc
Q 039804 80 KFKDSGFVTLKM 91 (95)
Q Consensus 80 ~l~~~~l~f~~~ 91 (95)
+|+++|++|...
T Consensus 284 ~l~~~g~~f~~~ 295 (296)
T 3bfx_A 284 KMEGTSINFSME 295 (296)
T ss_dssp HHTTCCCCCCCC
T ss_pred HhCCCCCccccC
Confidence 999999998653
No 9
>1j99_A Alcohol sulfotransferase; dehydroepiandosterone, DHEA; HET: AND; 1.99A {Homo sapiens} SCOP: c.37.1.5 PDB: 1ov4_A* 3f3y_A* 2qp3_A* 2qp4_A* 1efh_A*
Probab=99.80 E-value=4.8e-20 Score=130.43 Aligned_cols=83 Identities=27% Similarity=0.414 Sum_probs=68.7
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhhHhh-ccccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHh
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNLEVT-KSRINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~-~~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|+|||++++++. ++.++++|||++||++..+ ....+..... ....|+|||.+|+||++||++|++++++++++
T Consensus 207 ~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~~~~~~~-~~~~f~RkG~~g~Wk~~lt~e~~~~~~~~~~~ 280 (293)
T 1j99_A 207 CQFLGKTLEPEE-----LNLILKNSSFQSMKENKMSNYSLLSVDYVV-DKTQLLRKGVSGDWKNHFTVAQAEDFDKLFQE 280 (293)
T ss_dssp HHHHTCCCCHHH-----HHHHHHHTCHHHHHTCTTTSSTTCCTTTBS-CGGGGGCSSCSSCGGGTSCHHHHHHHHHHHHH
T ss_pred HHHcCCCCCHHH-----HHHHHHhCCHHHHHhchhhccccccchhhc-cccccccCCCCCcccccCCHHHHHHHHHHHHH
Confidence 479999999998 9999999999999987543 2222110111 45679999999999999999999999999999
Q ss_pred HhCCCCce-ee
Q 039804 80 KFKDSGFV-TL 89 (95)
Q Consensus 80 ~l~~~~l~-f~ 89 (95)
+|+++|++ |.
T Consensus 281 ~l~~~g~~~f~ 291 (293)
T 1j99_A 281 KMADLPRELFP 291 (293)
T ss_dssp HHTTSCGGGSC
T ss_pred HhCCCCCcccc
Confidence 99999998 75
No 10
>1q20_A SULT2B1B, sulfotransferase family, cytosolic, 2B, member 1 isoform B; pregnenolone, cholesterol, PAP; HET: A3P PLO; 2.30A {Homo sapiens} SCOP: c.37.1.5 PDB: 1q1z_A* 1q22_A*
Probab=99.80 E-value=4.2e-20 Score=131.16 Aligned_cols=85 Identities=19% Similarity=0.383 Sum_probs=69.4
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhhHhh-ccccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHh
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNLEVT-KSRINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~-~~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|+|||++++++. ++.++++|||++||++..+ ....+..........|+|||.||+||++||++|++++++++++
T Consensus 212 ~~FLG~~~~~~~-----l~~i~~~~sf~~mk~~~~~~~~~~~~~~~~~~~~~f~RkG~~G~Wk~~lt~e~~~~~~~~~~~ 286 (299)
T 1q20_A 212 CGFLGRPLGKEA-----LGSVVAHSTFSAMKANTMSNYTLLPPSLLDHRRGAFLRKGVCGDWKNHFTVAQSEAFDRAYRK 286 (299)
T ss_dssp HHHHTCCCCHHH-----HHHHHHHHSHHHHHTCTTTSCTTSCTTTBCTTTCCSSCCCCSCGGGGTCCHHHHHHHHHHHHH
T ss_pred HHHcCCCCCHHH-----HHHHHHhCCHHHHHhhhhhccccCcchhcccccchheeCCCCCCccccCCHHHHHHHHHHHHH
Confidence 479999999998 9999999999999987533 2222211112245679999999999999999999999999999
Q ss_pred HhCCCCceeecc
Q 039804 80 KFKDSGFVTLKM 91 (95)
Q Consensus 80 ~l~~~~l~f~~~ 91 (95)
+|+++|+ |.-.
T Consensus 287 ~l~~~g~-f~~~ 297 (299)
T 1q20_A 287 QMRGMPT-FPWD 297 (299)
T ss_dssp HTTTCCC-CTTC
T ss_pred HhCCCCC-eeec
Confidence 9999999 8654
No 11
>1q44_A RARO47, steroid sulfotransferase, AT2G03760/; APO, structu genomics, protein structure initiative, center for eukaryot structural genomics; 1.90A {Arabidopsis thaliana} SCOP: c.37.1.5 PDB: 2q3m_A
Probab=99.80 E-value=9.1e-21 Score=136.54 Aligned_cols=82 Identities=43% Similarity=0.712 Sum_probs=49.6
Q ss_pred CcccCCCCChH-HHhhHHHHHHHHhCChhHhhhhHhhccccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHh
Q 039804 1 AEFLSQPFTSE-EEEAGVVQEIVKLRSFENMSNLEVTKSRINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 1 A~FLg~~~~~~-~~~~~~~~~iv~~ssf~~Mk~~~~~~~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|+|||++++++ + +++|+++|||++||+++.|..+.. ........|+|||+||+||+|||++|++++++++++
T Consensus 243 ~~FLG~~~~~~~~-----l~~iv~~~sf~~mk~~~~~~~~~~--~~~~~~~~f~RkG~vGdWkn~~t~e~~~~~d~~~~e 315 (326)
T 1q44_A 243 AEFLECGFIEEEE-----VREIVKLCSFESLSNLEVNKEGKL--PNGIETKTFFRKGEIGGWRDTLSESLAEEIDRTIEE 315 (326)
T ss_dssp HHHHCSSCCCHHH-----HHHHHHHHTTC-------------------------------CHHHHSCHHHHHHHHHHHHH
T ss_pred HHHhCCCCChHHH-----HHHHHHhCCHHHHHhHhhhccccc--cccCCCCceeeCCCCCCCccCCCHHHHHHHHHHHHH
Confidence 47999999865 4 899999999999998765543321 111244679999999999999999999999999999
Q ss_pred HhCCCCceee
Q 039804 80 KFKDSGFVTL 89 (95)
Q Consensus 80 ~l~~~~l~f~ 89 (95)
+|+++|+.|.
T Consensus 316 ~l~~~g~~f~ 325 (326)
T 1q44_A 316 KFKGSGLKFS 325 (326)
T ss_dssp HTTTSSCCCC
T ss_pred HcCCCCCccC
Confidence 9999999985
No 12
>3mgb_A TEG12; sulfotransferase, glycopeptide, antibiotic, transferase-anti complex; HET: GHP 3MY 3FG OMY PAP; 2.04A {Uncultured soil bacterium} PDB: 3mgc_A* 3mg9_A* 3nib_A*
Probab=99.76 E-value=2e-19 Score=129.91 Aligned_cols=80 Identities=19% Similarity=0.271 Sum_probs=59.5
Q ss_pred Cccc--CCCCChHHHhhHHHHHHHHhCChhHhhhhHhhccccccccccccCcceeeccccCCcccCCCHH---------H
Q 039804 1 AEFL--SQPFTSEEEEAGVVQEIVKLRSFENMSNLEVTKSRINRVNIEIKNDVYFRQGKVGAWKNHLTAE---------M 69 (95)
Q Consensus 1 A~FL--g~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~~~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~e---------q 69 (95)
|+|| |+++++++ +++|+++|||++||+++.++..............|+|||+|||||||||+| +
T Consensus 216 ~~FL~~G~~~~~e~-----l~~iv~~~SFe~MK~~~~~~~~~~~~~~~~~~~~f~RKG~vGdWkn~ft~e~~~~~~l~~~ 290 (319)
T 3mgb_A 216 VEFLDLGGPVDIED-----IRRAVAASTLERMRELEKRSEQQGGGSPIRHGDARMMKGGPGGARPQFVGEGRYDQSLSFL 290 (319)
T ss_dssp HHHHTCSSCCCHHH-----HHHHHHTTSHHHHHHHHHHC----CCCCC------CCSCSGGGCCCCSSCCCCSSCCCGGG
T ss_pred HHHHhcCCCCCHHH-----HHHHHHHCCHHHHHhhHhhccccCCcccccCCCcceeCCCcCcccccCChhhcccchHHHH
Confidence 4799 99999999 999999999999999876554321111112345899999999999999995 4
Q ss_pred HHHHHHHHHhHhCCCC
Q 039804 70 LQCLDQIVQQKFKDSG 85 (95)
Q Consensus 70 ~~~~~~~~~~~l~~~~ 85 (95)
-+.+++.+++.|.|.+
T Consensus 291 ~~~~~~~~~~~~~g~~ 306 (319)
T 3mgb_A 291 GEDIESDYQELLHGDS 306 (319)
T ss_dssp CHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHhcCCc
Confidence 4899999999999853
No 13
>1q1q_A SULT2B1A, sulfotransferase family, cytosolic, 2B, member 1 isoform A; pregnenolone, PAP; HET: A3P NHE; 2.91A {Homo sapiens} SCOP: c.37.1.5
Probab=99.75 E-value=8.1e-19 Score=127.61 Aligned_cols=86 Identities=19% Similarity=0.364 Sum_probs=69.9
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhhHhh-ccccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHh
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNLEVT-KSRINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~-~~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|+|||++++++. ++.|+++|||++||++..+ ....+..........|+|||+||+||++||++|++++++++++
T Consensus 210 ~~FLGl~~~~~~-----l~~iv~~~sf~~mk~~~~~~~~~~~~~~~~~~~~~f~RkG~vGdWk~~ls~e~~~~~~~~~~e 284 (350)
T 1q1q_A 210 CGFLGRPLGKEA-----LGSVVAHSTFSAMKANTMSNYTLLPPSLLDHRRGAFLRKGVCGDWKNHFTVAQSEAFDRAYRK 284 (350)
T ss_dssp HHHHTCCCCHHH-----HHHHHHHHSHHHHHTCTTTSSTTSCTTTBCTTTCCSSCCCCTTGGGGTCCHHHHHHHHHHHHT
T ss_pred HHHcCCCCCHHH-----HHHHHHHCCHHHHHhhHhhccccccchhhccccchhhccCCCCCccccCCHHHHHHHHHHHHH
Confidence 479999999998 9999999999999987533 2222111112235679999999999999999999999999999
Q ss_pred HhCCCCceeeccc
Q 039804 80 KFKDSGFVTLKMF 92 (95)
Q Consensus 80 ~l~~~~l~f~~~~ 92 (95)
+|+++|+ |...+
T Consensus 285 ~l~~~Gy-f~~~~ 296 (350)
T 1q1q_A 285 QMRGMPT-FPWDE 296 (350)
T ss_dssp TSTTCCC-CTTCC
T ss_pred HhcCCCC-ccccC
Confidence 9999999 87654
No 14
>2ov8_A STAL; sulfotransferase, structural genomics, montr kingston bacterial structural genomics initiative, BSGI, UN function; 2.58A {Streptomyces toyocaensis} PDB: 2ovb_A 2ovf_A*
Probab=99.69 E-value=2.6e-18 Score=121.73 Aligned_cols=75 Identities=13% Similarity=0.128 Sum_probs=48.1
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhhHhh---cc-cccccccc-ccCcceeeccccCCcccCCCHHHHHHHHH
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNLEVT---KS-RINRVNIE-IKNDVYFRQGKVGAWKNHLTAEMLQCLDQ 75 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~---~~-~~~~~~~~-~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~ 75 (95)
|+|||++ +++. +++|+++|||++||+++.+ .. ..+..... .....|||||+||||||| |+++||+
T Consensus 196 ~~FLGl~-~~~~-----l~~iv~~~sf~~mk~~~~~~~~~~~~~~~~~~~~~~~~~f~RKG~vGdWkn~----~~~~~d~ 265 (288)
T 2ov8_A 196 VDFLELG-GRDG-----VADAVANCTLERMREMEERSKLLGLETTGLMTRGGKQLPFVGKGGQRKSLKF----MGDDIEK 265 (288)
T ss_dssp HHHTTCS-CSST-----HHHHHHHCCTTHHHHHHHHHHHHSCCCC--------------------CCTT----TCSTTHH
T ss_pred HHHcCCC-CHHH-----HHHHHHhCCHHHHHhChhhcccccCcccccccccccccceeeCcCCCChHHH----HHHHHHH
Confidence 4799999 8888 9999999999999998654 21 11000000 134679999999999999 9999999
Q ss_pred HHHhHhCCCC
Q 039804 76 IVQQKFKDSG 85 (95)
Q Consensus 76 ~~~~~l~~~~ 85 (95)
+++++|+|++
T Consensus 266 ~~~~k~~g~~ 275 (288)
T 2ov8_A 266 AYADLLHGET 275 (288)
T ss_dssp HHHHHHTSSS
T ss_pred HHHHHhcCCC
Confidence 9999999987
No 15
>1zd1_A Sulfotransferase 4A1; SGC, SULT4A1, structural genomics, structural genomics conso transferase; 2.24A {Homo sapiens}
Probab=99.66 E-value=4.6e-17 Score=114.78 Aligned_cols=73 Identities=18% Similarity=0.267 Sum_probs=64.1
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHhhhhHhhccccccccccccCcceeeccccCCcccCCCHHHHHHHHHHHHhH
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENMSNLEVTKSRINRVNIEIKNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~Mk~~~~~~~~~~~~~~~~~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~~ 80 (95)
|+|||++++++. ++.+++++|| +||++. + . ...++|||.+|+||+|||++|+++++++++++
T Consensus 211 ~~FLGl~~~~~~-----l~~~~~~~sf-~mk~~~-~---~--------~~~~~rkg~~g~Wk~~~s~e~~~~~~~~~~~~ 272 (284)
T 1zd1_A 211 ARFLGVSCDKAQ-----LEALTEHCHQ-LVDQCC-N---A--------EALPVGRGRVGLWKDIFTVSMNEKFDLVYKQK 272 (284)
T ss_dssp HHHTTCCCCHHH-----HHHHHHHHHH-HHHTTB-C---T--------TSSBSSTTCTTGGGGTCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCHHH-----HHHHHHHCCh-hhhhCc-c---c--------CCCcccCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence 479999999998 9999999999 999763 1 0 12359999999999999999999999999999
Q ss_pred hCCCCceeecc
Q 039804 81 FKDSGFVTLKM 91 (95)
Q Consensus 81 l~~~~l~f~~~ 91 (95)
|+++|+.|...
T Consensus 273 l~~~g~~f~~~ 283 (284)
T 1zd1_A 273 MGKCDLTFDFY 283 (284)
T ss_dssp HTTCCCCCCSC
T ss_pred hCCCCCCcccC
Confidence 99999998654
No 16
>3ap1_A Protein-tyrosine sulfotransferase 2; sulfotransferase fold, transferase; HET: A3P; 1.90A {Homo sapiens} PDB: 3ap2_A* 3ap3_A*
Probab=98.17 E-value=2e-07 Score=66.91 Aligned_cols=36 Identities=8% Similarity=0.318 Sum_probs=30.4
Q ss_pred ceeeccccCCcccCCCHHHHHHHHHHHHhHhCCCCce
Q 039804 51 VYFRQGKVGAWKNHLTAEMLQCLDQIVQQKFKDSGFV 87 (95)
Q Consensus 51 ~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~~l~~~~l~ 87 (95)
.++|+|.+|+||++||++|+++++ .+...|...|..
T Consensus 269 ~~i~~~~vg~Wk~~ls~~~~~~~~-~~~~~l~~lGY~ 304 (337)
T 3ap1_A 269 KPVNLEALSKWTGHIPGDVVRDMA-QIAPMLAQLGYD 304 (337)
T ss_dssp SCSCSTTSSTTTTCSCHHHHHHHH-HHCTHHHHTTCC
T ss_pred CCCChHHHHHHHHhCCHHHHHHHH-HHHHHHHHhCCC
Confidence 479999999999999999999998 677777755543
No 17
>4gox_A Polyketide synthase; olefin synthase, hydrocarbon, sulfotran PAPS, PAP, 3'phosphoadenosine-5'phosphosulfate, transferase; HET: A3P; 2.15A {Synechococcus SP}
Probab=96.98 E-value=4e-05 Score=53.30 Aligned_cols=40 Identities=10% Similarity=0.091 Sum_probs=29.8
Q ss_pred cceeeccccCCcccCCCHHHHHHHHHHHHhHhCCCCceeec
Q 039804 50 DVYFRQGKVGAWKNHLTAEMLQCLDQIVQQKFKDSGFVTLK 90 (95)
Q Consensus 50 ~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~~l~~~~l~f~~ 90 (95)
..+|+++.+|.||+++++++++.+...+.+++ |.++.-.|
T Consensus 267 ~~~i~~~~~~~Wr~~l~~~~i~~~~~~l~~~l-GY~l~~~p 306 (313)
T 4gox_A 267 HKTIDPALADKWRSITLPAALQLDTIQLAETF-AYDLPQEP 306 (313)
T ss_dssp CSSCCGGGGGGGGSCCCSSCCCHHHHHHHHHT-TCCCC---
T ss_pred cCCCChhHHhhHhhcCCHHHHHHHHHHHHHHH-CCCCCCCC
Confidence 45789999999999999998888877777666 55554444
No 18
>1t8t_A Heparan sulfate D-glucosaminyl 3-O- sulfotransferase 3A1; alpha-beta motif, substrate-binding cleft; HET: A3P CIT; 1.85A {Homo sapiens} SCOP: c.37.1.5 PDB: 1t8u_A*
Probab=95.21 E-value=0.006 Score=41.60 Aligned_cols=32 Identities=13% Similarity=0.113 Sum_probs=27.1
Q ss_pred cceeeccccCCcccCCCHHHHHHHHHHHHhHhC
Q 039804 50 DVYFRQGKVGAWKNHLTAEMLQCLDQIVQQKFK 82 (95)
Q Consensus 50 ~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~~l~ 82 (95)
..++++++ |+|+..+++++.+++.+++++...
T Consensus 226 ~~~~~~~~-~~~~~~l~~e~~~~L~~~~~~~~~ 257 (271)
T 1t8t_A 226 PHCLGKTK-GRTHPEIDREVVRRLREFYRPFNL 257 (271)
T ss_dssp CBCCCTTS-SCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred chhhhccc-CCCCCCCCHHHHHHHHHHHHHHHH
Confidence 35788876 899999999999999999986544
No 19
>4gbm_A CURM sulfotransferase; polyketide synthase, curacin, PAP, PAPS; HET: A3P P6G; 1.62A {Moorea producta}
Probab=95.19 E-value=0.0021 Score=44.74 Aligned_cols=33 Identities=12% Similarity=0.150 Sum_probs=27.5
Q ss_pred cceeeccccCCcccCCCHHHHHHHHHHHHhHhC
Q 039804 50 DVYFRQGKVGAWKNHLTAEMLQCLDQIVQQKFK 82 (95)
Q Consensus 50 ~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~~l~ 82 (95)
...++++.+|.||++++++++..+.+.+.++|+
T Consensus 275 ~~~i~~~~~~~Wr~~~~~~~~~~~~~~~~~~lG 307 (323)
T 4gbm_A 275 HNTIDESLADKWKTIQLPYPLKSETQRIASQLS 307 (323)
T ss_dssp CSSCCGGGGGGGGTCCCSSCCCHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHhhhcCHHHHHHHHHHHHHHcC
Confidence 457899999999999999888887777777763
No 20
>3o39_A Periplasmic protein related to spheroblast format; alpha-helical, structural genomics, montreal-kingston bacter structural genomics initiative; HET: MSE; 2.60A {Escherichia coli}
Probab=68.57 E-value=3.6 Score=24.84 Aligned_cols=22 Identities=18% Similarity=0.197 Sum_probs=18.7
Q ss_pred CcccCCCHHHHHHHHHHHHhHh
Q 039804 60 AWKNHLTAEMLQCLDQIVQQKF 81 (95)
Q Consensus 60 ~Wk~~ft~eq~~~~~~~~~~~l 81 (95)
.--+.|||||-+.+++.+++++
T Consensus 86 qmy~lLTPEQk~q~~~~~~~r~ 107 (108)
T 3o39_A 86 KIYNILTPEQKKQFNANFEKRL 107 (108)
T ss_dssp HHHTTSCHHHHHHHHHHHHHSC
T ss_pred HHHHhCCHHHHHHHHHHHHhhc
Confidence 3456899999999999998875
No 21
>2ecc_A Homeobox and leucine zipper protein homez; homeobox domain, transcription factor, leucine zipper- containing factor, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=61.43 E-value=10 Score=21.33 Aligned_cols=25 Identities=28% Similarity=0.266 Sum_probs=21.0
Q ss_pred cccCCcccCCCHHHHHHHHHHHHhH
Q 039804 56 GKVGAWKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 56 G~vG~Wk~~ft~eq~~~~~~~~~~~ 80 (95)
|..|.=+.-||++|+..+++++...
T Consensus 1 ~~~g~~r~kfT~~Ql~~Le~~F~~~ 25 (76)
T 2ecc_A 1 GSSGSSGKRKTKEQLAILKSFFLQC 25 (76)
T ss_dssp CCCSCCCCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHC
Confidence 4567778889999999999999854
No 22
>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A
Probab=58.04 E-value=8.1 Score=24.44 Aligned_cols=24 Identities=25% Similarity=0.256 Sum_probs=21.0
Q ss_pred CcccCCCHHHHHHHHHHHHhHhCC
Q 039804 60 AWKNHLTAEMLQCLDQIVQQKFKD 83 (95)
Q Consensus 60 ~Wk~~ft~eq~~~~~~~~~~~l~~ 83 (95)
..-+.|||||-+++.+.+++++..
T Consensus 114 qiy~vLTPEQk~ql~e~~~~r~~~ 137 (145)
T 3itf_A 114 QMYRLLTPEQQAVLNEKHQQRMEQ 137 (145)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHH
Confidence 556789999999999999998865
No 23
>2hw2_A Rifampin ADP-ribosyl transferase; protein-antibiotic complex, ADP-ribosylation; HET: RFP; 1.45A {Mycobacterium smegmatis}
Probab=50.86 E-value=13 Score=23.57 Aligned_cols=25 Identities=24% Similarity=0.490 Sum_probs=20.4
Q ss_pred ccccCCcccCCCHHHHHHHHHHHHhH
Q 039804 55 QGKVGAWKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 55 kG~vG~Wk~~ft~eq~~~~~~~~~~~ 80 (95)
-|.|.+|.-| ++|+++.|...+++-
T Consensus 109 vgEv~~W~~h-~pE~lq~mr~~La~l 133 (143)
T 2hw2_A 109 VGELTDWVGH-PPEQLAAMRQGLEEL 133 (143)
T ss_dssp EEEECCCCCC-CHHHHHHHHHHHHHH
T ss_pred EEEecccCCC-CHHHHHHHHHHHHHH
Confidence 4899999876 889999998887753
No 24
>3oeo_A Spheroplast protein Y; LTXXQ, extracytoplasmic stress response-related, signaling P; 2.70A {Escherichia coli}
Probab=45.73 E-value=7.8 Score=24.13 Aligned_cols=25 Identities=16% Similarity=0.217 Sum_probs=17.7
Q ss_pred CCcccCCCHHHHHHHHHHHHhHhCC
Q 039804 59 GAWKNHLTAEMLQCLDQIVQQKFKD 83 (95)
Q Consensus 59 G~Wk~~ft~eq~~~~~~~~~~~l~~ 83 (95)
-...+.|||||-+.|++.+++++..
T Consensus 101 ~~~~~vLTPEQr~q~~~~~~kr~~~ 125 (138)
T 3oeo_A 101 NKIYNILTPEQKKQFNANFEKRLTE 125 (138)
T ss_dssp HHHHTTSCHHHHHHHHHHTC-----
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 4567799999999999999887764
No 25
>2zq5_A Putative uncharacterized protein; sulfotransferase fold; 2.00A {Mycobacterium tuberculosis}
Probab=43.25 E-value=7.1 Score=27.82 Aligned_cols=25 Identities=8% Similarity=0.122 Sum_probs=15.4
Q ss_pred CcccCCCCChHHHhhHHHHHHHHhCChhHh
Q 039804 1 AEFLSQPFTSEEEEAGVVQEIVKLRSFENM 30 (95)
Q Consensus 1 A~FLg~~~~~~~~~~~~~~~iv~~ssf~~M 30 (95)
++|||++++++. ++.|.++++....
T Consensus 332 ~~FLGl~~~~~~-----~~~i~~~~~~~~~ 356 (384)
T 2zq5_A 332 YRHFGLTLSDEA-----RQAMTTVHAESQS 356 (384)
T ss_dssp HHHTTCCCCHHH-----HHHHHC-------
T ss_pred HHHhCCCCCHHH-----HHHHHHHHHhCcc
Confidence 468999999888 8888888877554
No 26
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=41.26 E-value=24 Score=24.19 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=26.5
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHhCC--CCceeeccc
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKFKD--SGFVTLKMF 92 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l~~--~~l~f~~~~ 92 (95)
.+|+||-+.|.++...+-+.+...+.. .++-..|.+
T Consensus 6 i~gNwKmn~~~~~~~~~~~~l~~~~~~~~vev~v~Pp~ 43 (250)
T 1yya_A 6 VAGNWKMHKTPSEARVWFAELKRLLPPLQSEAAVLPAF 43 (250)
T ss_dssp EEEECCBCCCHHHHHHHHHHHHHHCCCCSSEEEEECCG
T ss_pred EEEeCccccCHHHHHHHHHHHHhhccccCceEEEeCCH
Confidence 468999999999999998888776654 344444443
No 27
>1bw5_A ISL-1HD, insulin gene enhancer protein ISL-1; DNA-binding protein, homeodomain, LIM domain; NMR {Rattus norvegicus} SCOP: a.4.1.1
Probab=36.40 E-value=34 Score=17.87 Aligned_cols=19 Identities=16% Similarity=0.221 Sum_probs=16.2
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++.++...
T Consensus 7 Rt~ft~~q~~~Le~~F~~~ 25 (66)
T 1bw5_A 7 RTVLNEKQLHTLRTCYAAN 25 (66)
T ss_dssp CCCCSHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHhcC
Confidence 5689999999999998763
No 28
>3a02_A Homeobox protein aristaless; homeodomain, developmental protein, DNA-binding, N gene regulation; 1.00A {Drosophila melanogaster} PDB: 3lnq_A 3cmy_A
Probab=36.25 E-value=31 Score=17.64 Aligned_cols=19 Identities=16% Similarity=0.191 Sum_probs=14.7
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++..+...
T Consensus 3 Rt~ft~~Q~~~Le~~F~~~ 21 (60)
T 3a02_A 3 HMTFTSFQLEELEKAFSRT 21 (60)
T ss_dssp --CCCHHHHHHHHHHHHHC
T ss_pred CcccCHHHHHHHHHHHHcC
Confidence 5679999999999988653
No 29
>1k61_A Mating-type protein alpha-2; protein-DNA complex, homeodomain, hoogsteen base PAIR, transcription/DNA complex; HET: 5IU; 2.10A {Synthetic} SCOP: a.4.1.1
Probab=35.08 E-value=38 Score=17.26 Aligned_cols=19 Identities=16% Similarity=0.277 Sum_probs=16.2
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|...++.++...
T Consensus 2 r~~ft~~q~~~Le~~f~~~ 20 (60)
T 1k61_A 2 GHRFTKENVRILESWFAKN 20 (60)
T ss_dssp CCSCCHHHHHHHHHHHHHT
T ss_pred cCcCCHHHHHHHHHHHHHc
Confidence 3579999999999999873
No 30
>2dmu_A Homeobox protein goosecoid; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.21 E-value=38 Score=17.91 Aligned_cols=20 Identities=25% Similarity=0.468 Sum_probs=16.7
Q ss_pred cccCCCHHHHHHHHHHHHhH
Q 039804 61 WKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 61 Wk~~ft~eq~~~~~~~~~~~ 80 (95)
-+..||++|+..++.++...
T Consensus 10 ~Rt~ft~~q~~~Le~~F~~~ 29 (70)
T 2dmu_A 10 HRTIFTDEQLEALENLFQET 29 (70)
T ss_dssp CCCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHcc
Confidence 45689999999999998763
No 31
>2dn0_A Zinc fingers and homeoboxes protein 3; triple homeobox 1 protein, KIAA0395, TIX1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.18 E-value=37 Score=18.34 Aligned_cols=19 Identities=26% Similarity=0.268 Sum_probs=16.7
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++.++...
T Consensus 12 R~~ft~~Ql~~Le~~F~~~ 30 (76)
T 2dn0_A 12 KNKKSHEQLSALKGSFCRN 30 (76)
T ss_dssp CCCCCHHHHHHHHHHHHHS
T ss_pred CccCCHHHHHHHHHHHhcC
Confidence 6789999999999998764
No 32
>1ig7_A Homeotic protein MSX-1; helix-turn-helix, transcription/DNA complex; 2.20A {Mus musculus} SCOP: a.4.1.1
Probab=34.14 E-value=40 Score=17.00 Aligned_cols=19 Identities=26% Similarity=0.399 Sum_probs=15.8
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++..+...
T Consensus 4 Rt~ft~~Q~~~Le~~F~~~ 22 (58)
T 1ig7_A 4 RTPFTTAQLLALERKFRQK 22 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHhcC
Confidence 4679999999999988753
No 33
>2hdd_A Protein (engrailed homeodomain Q50K); DNA binding, complex (DNA binding protein/DNA), transcription/DNA complex; HET: DNA; 1.90A {Drosophila melanogaster} SCOP: a.4.1.1 PDB: 1hdd_C* 2jwt_A 3hdd_A 1p7j_A* 1p7i_A* 2hos_A 2hot_A 1du0_A* 1ztr_A 1enh_A 2p81_A
Probab=33.73 E-value=41 Score=17.25 Aligned_cols=19 Identities=16% Similarity=0.314 Sum_probs=15.9
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++..+...
T Consensus 7 Rt~ft~~Q~~~Le~~F~~~ 25 (61)
T 2hdd_A 7 RTAFSSEQLARLKREFNEN 25 (61)
T ss_dssp CCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHcc
Confidence 5679999999999988753
No 34
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=33.71 E-value=42 Score=22.76 Aligned_cols=36 Identities=8% Similarity=0.098 Sum_probs=26.1
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHhC---CCCceeeccc
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKFK---DSGFVTLKMF 92 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l~---~~~l~f~~~~ 92 (95)
.+|+||-+.|.++...+-+.+...+. +.++-..|.+
T Consensus 4 i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~vev~v~Pp~ 42 (233)
T 2jgq_A 4 AMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFVFPDF 42 (233)
T ss_dssp EEEECTBCSCHHHHHHHHHHHHHHSCGGGTTTEEEECCT
T ss_pred EEEECCcCcCHHHHHHHHHHHHhhcccccCceEEEeCCH
Confidence 46999999999999988888876554 3455554444
No 35
>1jgg_A Segmentation protein EVEN-skipped; homeodomain, protein-DNA complex, transcription/DNA complex; 2.00A {Drosophila melanogaster} SCOP: a.4.1.1
Probab=32.83 E-value=43 Score=17.08 Aligned_cols=19 Identities=16% Similarity=0.272 Sum_probs=16.0
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++..+...
T Consensus 5 Rt~ft~~Q~~~Le~~F~~~ 23 (60)
T 1jgg_A 5 RTAFTRDQLGRLEKEFYKE 23 (60)
T ss_dssp CCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHc
Confidence 5689999999999988763
No 36
>2da1_A Alpha-fetoprotein enhancer binding protein; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics; NMR {Homo sapiens}
Probab=32.74 E-value=42 Score=17.70 Aligned_cols=19 Identities=21% Similarity=0.380 Sum_probs=16.3
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++.++...
T Consensus 11 Rt~ft~~q~~~Le~~F~~~ 29 (70)
T 2da1_A 11 RTRITDDQLRVLRQYFDIN 29 (70)
T ss_dssp SCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHC
Confidence 5689999999999999764
No 37
>2dmq_A LIM/homeobox protein LHX9; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.68 E-value=40 Score=18.28 Aligned_cols=20 Identities=5% Similarity=0.157 Sum_probs=16.6
Q ss_pred cccCCCHHHHHHHHHHHHhH
Q 039804 61 WKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 61 Wk~~ft~eq~~~~~~~~~~~ 80 (95)
-+..||++|+..++.++...
T Consensus 10 ~Rt~ft~~Q~~~Le~~F~~~ 29 (80)
T 2dmq_A 10 MRTSFKHHQLRTMKSYFAIN 29 (80)
T ss_dssp CCCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHc
Confidence 35689999999999998754
No 38
>1wh5_A ZF-HD homeobox family protein; structural genomics, zinc finger homeobox family protein, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.4.1.1
Probab=32.43 E-value=41 Score=18.59 Aligned_cols=19 Identities=16% Similarity=0.258 Sum_probs=16.2
Q ss_pred cccCCCHHHHHHHHHHHHh
Q 039804 61 WKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 61 Wk~~ft~eq~~~~~~~~~~ 79 (95)
-+..||++|+..++..+..
T Consensus 20 ~Rt~ft~~Ql~~Le~~f~~ 38 (80)
T 1wh5_A 20 HRTKFTAEQKERMLALAER 38 (80)
T ss_dssp CSCCCCHHHHHHHHHHHHH
T ss_pred CCccCCHHHHHHHHHHHHh
Confidence 4568999999999998776
No 39
>2da4_A Hypothetical protein DKFZP686K21156; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.06 E-value=28 Score=19.04 Aligned_cols=19 Identities=11% Similarity=0.204 Sum_probs=16.5
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||.+|+..++.++...
T Consensus 12 Rt~ft~~Q~~~Le~~F~~~ 30 (80)
T 2da4_A 12 RTQFSDRDLATLKKYWDNG 30 (80)
T ss_dssp SCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHHHHhC
Confidence 5679999999999998765
No 40
>2da2_A Alpha-fetoprotein enhancer binding protein; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics; NMR {Homo sapiens}
Probab=31.99 E-value=43 Score=17.62 Aligned_cols=20 Identities=15% Similarity=0.250 Sum_probs=16.6
Q ss_pred cccCCCHHHHHHHHHHHHhH
Q 039804 61 WKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 61 Wk~~ft~eq~~~~~~~~~~~ 80 (95)
-+..||++|+..++.++...
T Consensus 10 ~Rt~ft~~q~~~Le~~F~~~ 29 (70)
T 2da2_A 10 SRTRFTDYQLRVLQDFFDAN 29 (70)
T ss_dssp CCCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHcC
Confidence 35689999999999998763
No 41
>3fbi_A Mediator of RNA polymerase II transcription subunit 7; proline-rich stretches, right-handed four-helix bundle, protein-protein complex; 2.80A {Saccharomyces cerevisiae} PDB: 3fbn_A
Probab=31.69 E-value=41 Score=19.31 Aligned_cols=27 Identities=19% Similarity=0.228 Sum_probs=21.1
Q ss_pred cCcceeeccccCCcccCCCHHHHHHHHHHHHhHhCC
Q 039804 48 KNDVYFRQGKVGAWKNHLTAEMLQCLDQIVQQKFKD 83 (95)
Q Consensus 48 ~~~~f~RkG~vG~Wk~~ft~eq~~~~~~~~~~~l~~ 83 (95)
....|++ +||++-++|++++-+++-.+
T Consensus 16 pPPPf~K---------~FT~eNl~kl~e~k~~~~~~ 42 (84)
T 3fbi_A 16 PPPPYVK---------FFTQSNLEKLPKYKEKKAAS 42 (84)
T ss_dssp CCCGGGG---------GCCHHHHHHHHHHHHHHHC-
T ss_pred CCCchhh---------hcCHHHHHHHHHHHHHhccc
Confidence 4456776 99999999999998877543
No 42
>1akh_A Protein (mating-type protein A-1); complex (TWO DNA-binding proteins/DNA), complex, DNA- binding protein, DNA; HET: DNA; 2.50A {Saccharomyces cerevisiae} SCOP: a.4.1.1 PDB: 1f43_A 1yrn_A*
Probab=31.69 E-value=39 Score=17.26 Aligned_cols=19 Identities=16% Similarity=0.424 Sum_probs=14.4
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|...++.++...
T Consensus 9 Rt~ft~~q~~~Le~~f~~~ 27 (61)
T 1akh_A 9 KSSISPQARAFLEEVFRRK 27 (61)
T ss_dssp ---CCHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHhC
Confidence 4679999999999998764
No 43
>2y39_A Nickel and cobalt resistance protein CNRR; metal binding protein; 1.41A {Cupriavidus metallidurans} PDB: 2y3b_A 2y3d_A 2y3g_A* 2y3h_A 3epv_A*
Probab=30.95 E-value=10 Score=23.32 Aligned_cols=26 Identities=15% Similarity=0.221 Sum_probs=21.3
Q ss_pred cCCcccCCCHHHHHHHHHHHHhHhCC
Q 039804 58 VGAWKNHLTAEMLQCLDQIVQQKFKD 83 (95)
Q Consensus 58 vG~Wk~~ft~eq~~~~~~~~~~~l~~ 83 (95)
|=.-+..|||+|..+|++.+-+.|.+
T Consensus 90 vfeMR~VLtPeQ~~~fd~~vv~alt~ 115 (118)
T 2y39_A 90 VFEMRAGLKPEHRPAYDRVLIDALRR 115 (118)
T ss_dssp HHHHHHHSCGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHhcc
Confidence 44567889999999999998887754
No 44
>2cra_A Homeobox protein HOX-B13; DNA-binding, transcription regulation, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=30.69 E-value=46 Score=17.60 Aligned_cols=19 Identities=11% Similarity=0.097 Sum_probs=16.1
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++..+...
T Consensus 11 Rt~ft~~Q~~~Le~~F~~~ 29 (70)
T 2cra_A 11 RIPYSKGQLRELEREYAAN 29 (70)
T ss_dssp CCCSCHHHHHHHHHHHHHC
T ss_pred CCcCCHHHHHHHHHHHHhc
Confidence 5689999999999998753
No 45
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=30.51 E-value=28 Score=22.90 Aligned_cols=37 Identities=11% Similarity=-0.040 Sum_probs=22.6
Q ss_pred ccCCcccCCCH--HHHHHHHHHHHhHh--CCCCceeecccc
Q 039804 57 KVGAWKNHLTA--EMLQCLDQIVQQKF--KDSGFVTLKMFS 93 (95)
Q Consensus 57 ~vG~Wk~~ft~--eq~~~~~~~~~~~l--~~~~l~f~~~~~ 93 (95)
.+|+||-+.|. ++...+-+.+.... .+.++-|.+++.
T Consensus 3 i~~NwKm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 43 (219)
T 2h6r_A 3 IVINYKTYNESIGNRGLEIAKIAEKVSEESGITIGVAPQFV 43 (219)
T ss_dssp EEEECTTCGGGSTHHHHHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred EEEECccCCCCCHHHHHHHHHHHHhcccccCCcEEEECCHH
Confidence 36899999763 66555554444322 245677777654
No 46
>2vi6_A Homeobox protein nanog; homeodomain, DNA-binding, transcription, transcription facto developmental protein, transcription regulation, NUC homeobox; 2.6A {Mus musculus}
Probab=30.08 E-value=48 Score=17.01 Aligned_cols=19 Identities=16% Similarity=0.254 Sum_probs=15.4
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++..+...
T Consensus 7 Rt~ft~~q~~~Le~~F~~~ 25 (62)
T 2vi6_A 7 RTVFSQAQLCALKDRFQKQ 25 (62)
T ss_dssp -CCCCHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHhC
Confidence 5689999999999988753
No 47
>2dmt_A Homeobox protein BARH-like 1; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.04 E-value=47 Score=18.08 Aligned_cols=21 Identities=14% Similarity=0.154 Sum_probs=17.3
Q ss_pred CcccCCCHHHHHHHHHHHHhH
Q 039804 60 AWKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 60 ~Wk~~ft~eq~~~~~~~~~~~ 80 (95)
.-+..||++|+..++..+...
T Consensus 19 r~Rt~ft~~Q~~~Le~~F~~~ 39 (80)
T 2dmt_A 19 RSRTVFTELQLMGLEKRFEKQ 39 (80)
T ss_dssp CSCCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHHhc
Confidence 346689999999999998764
No 48
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=29.91 E-value=49 Score=22.75 Aligned_cols=36 Identities=17% Similarity=0.181 Sum_probs=25.9
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHhCC---CCceeeccc
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKFKD---SGFVTLKMF 92 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l~~---~~l~f~~~~ 92 (95)
.+|+||-+.|.++...+-+.+...+.. .++-..|.+
T Consensus 6 i~gNwKmn~~~~~~~~~~~~l~~~~~~~~~vev~v~Pp~ 44 (256)
T 1aw2_A 6 VMGNWKLNGSKEMVVDLLNGLNAELEGVTGVDVAVAPPA 44 (256)
T ss_dssp EEEECCBCCCHHHHHHHHHHHHHHTTTCCSSEEEEECCG
T ss_pred EEEEcccccCHHHHHHHHHHHHhhcccccCeeEEEeCcH
Confidence 468999999999999888888765543 344444443
No 49
>2e1o_A Homeobox protein PRH; DNA binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=29.74 E-value=50 Score=17.44 Aligned_cols=19 Identities=5% Similarity=0.142 Sum_probs=15.9
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++.++...
T Consensus 11 R~~ft~~q~~~Le~~F~~~ 29 (70)
T 2e1o_A 11 QVRFSNDQTIELEKKFETQ 29 (70)
T ss_dssp CCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHcC
Confidence 4579999999999998753
No 50
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=29.58 E-value=50 Score=22.70 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=25.8
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHhCC---CCceeeccc
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKFKD---SGFVTLKMF 92 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l~~---~~l~f~~~~ 92 (95)
.+|+||-+.|.++...+-+.+...+.. .++-..|.+
T Consensus 7 i~gNwKmn~~~~~~~~l~~~l~~~~~~~~~vev~v~Pp~ 45 (255)
T 1b9b_A 7 LAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPF 45 (255)
T ss_dssp EEEECCBCCCHHHHHHHHHHHHHHTSSCCSSEEEEECCG
T ss_pred EEEeCCcCcCHHHHHHHHHHHHhhcccccCeeEEEeCcH
Confidence 468999999999999888888765543 344444443
No 51
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=29.50 E-value=50 Score=22.68 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=25.9
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHhCC---CCceeeccc
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKFKD---SGFVTLKMF 92 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l~~---~~l~f~~~~ 92 (95)
.+|+||-+.|.++...+-+.+...+.. .++-..|.+
T Consensus 6 i~gNwKmn~~~~~~~~~~~~l~~~~~~~~~vev~v~Pp~ 44 (255)
T 1tre_A 6 VMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPE 44 (255)
T ss_dssp EEEECCBCCCHHHHHHHHHHHHHHHTTCCSCEEEEECCT
T ss_pred EEEecccccCHHHHHHHHHHHHhhcccccCeeEEEeCcH
Confidence 468999999999999888888765543 344444443
No 52
>1ahd_P Antennapedia protein mutant; DNA binding protein/DNA; HET: DNA; NMR {Drosophila melanogaster} SCOP: a.4.1.1 PDB: 2hoa_A 1hom_A 1ftz_A
Probab=29.48 E-value=51 Score=17.37 Aligned_cols=19 Identities=11% Similarity=0.010 Sum_probs=16.0
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++..+...
T Consensus 6 Rt~ft~~Q~~~Le~~F~~~ 24 (68)
T 1ahd_P 6 RQTYTRYQTLELEKEFHFN 24 (68)
T ss_dssp TCCCCHHHHHHHHHHHHHC
T ss_pred CCCcCHHHHHHHHHHHccC
Confidence 4579999999999998754
No 53
>2ly9_A Zinc fingers and homeoboxes protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=28.31 E-value=54 Score=17.44 Aligned_cols=20 Identities=20% Similarity=0.092 Sum_probs=16.6
Q ss_pred cccCCCHHHHHHHHHHHHhH
Q 039804 61 WKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 61 Wk~~ft~eq~~~~~~~~~~~ 80 (95)
-+..||++|+..++..+...
T Consensus 9 ~Rt~ft~~Ql~~Le~~F~~~ 28 (74)
T 2ly9_A 9 IRAKKTKEQLAELKVSYLKN 28 (74)
T ss_dssp TTCCCCHHHHHHHHHHHHHC
T ss_pred CCcCCCHHHHHHHHHHHHHc
Confidence 46789999999999988753
No 54
>2dms_A Homeobox protein OTX2; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=27.56 E-value=57 Score=17.71 Aligned_cols=20 Identities=15% Similarity=0.288 Sum_probs=16.5
Q ss_pred cccCCCHHHHHHHHHHHHhH
Q 039804 61 WKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 61 Wk~~ft~eq~~~~~~~~~~~ 80 (95)
-+..||++|+..++..+...
T Consensus 10 ~Rt~ft~~Q~~~Le~~F~~~ 29 (80)
T 2dms_A 10 ERTTFTRAQLDVLEALFAKT 29 (80)
T ss_dssp CCSSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHcc
Confidence 35689999999999988763
No 55
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=27.44 E-value=46 Score=22.76 Aligned_cols=36 Identities=17% Similarity=0.047 Sum_probs=25.9
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHhCC--CCceeeccc
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKFKD--SGFVTLKMF 92 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l~~--~~l~f~~~~ 92 (95)
.+|+||-+.|.++...+-+.+...+.. .++-..|.+
T Consensus 8 i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~ 45 (248)
T 1r2r_A 8 VGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPT 45 (248)
T ss_dssp EEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEECCG
T ss_pred EEEeCCcccCHHHHHHHHHHHHhhccccCceEEEeCcH
Confidence 468999999999999998888765544 234444433
No 56
>2cuf_A FLJ21616 protein; homeobox domain, hepatocyte transcription factor, structural genomics, loop insertion, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=27.11 E-value=55 Score=18.47 Aligned_cols=18 Identities=11% Similarity=0.224 Sum_probs=15.7
Q ss_pred ccCCCHHHHHHHHHHHHh
Q 039804 62 KNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~ 79 (95)
+..||++|+..++.++..
T Consensus 11 R~~ft~~ql~~Le~~F~~ 28 (95)
T 2cuf_A 11 RFTWRKECLAVMESYFNE 28 (95)
T ss_dssp SCCCCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHhc
Confidence 557999999999999876
No 57
>2djn_A Homeobox protein DLX-5; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.02 E-value=41 Score=17.82 Aligned_cols=19 Identities=16% Similarity=0.113 Sum_probs=15.9
Q ss_pred cccCCCHHHHHHHHHHHHh
Q 039804 61 WKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 61 Wk~~ft~eq~~~~~~~~~~ 79 (95)
-+..||++|+..++.++..
T Consensus 10 ~Rt~ft~~Q~~~Le~~F~~ 28 (70)
T 2djn_A 10 PRTIYSSFQLAALQRRFQK 28 (70)
T ss_dssp SSCSSCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHcC
Confidence 3568999999999988865
No 58
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=26.57 E-value=49 Score=22.64 Aligned_cols=36 Identities=8% Similarity=-0.047 Sum_probs=25.6
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHhCC--CCceeeccc
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKFKD--SGFVTLKMF 92 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l~~--~~l~f~~~~ 92 (95)
.+|+||-+.|.+....+-+.+...+.. .++-..|.+
T Consensus 6 i~gNwKmn~~~~~~~~~~~~l~~~~~~~~vev~v~Pp~ 43 (247)
T 1ney_A 6 VGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPA 43 (247)
T ss_dssp EEEECCBCCCHHHHHHHHHHHHHSCCCTTEEEEEECCG
T ss_pred EEEECCcccCHHHHHHHHHHHHhhccccCceEEEeCcH
Confidence 468999999999999888888765543 334444433
No 59
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=26.56 E-value=50 Score=22.61 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=26.0
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHhCC--CCceeeccc
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKFKD--SGFVTLKMF 92 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l~~--~~l~f~~~~ 92 (95)
.+|+||-+.|.++...+-+.+...+.. .++-..|.+
T Consensus 9 i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~ 46 (251)
T 2vxn_A 9 AAANWKCNGTTASIEKLVQVFNEHTISHDVQCVVAPTF 46 (251)
T ss_dssp EEEECCSCCCHHHHHHHHHHHHHSCCCSCCEEEEECCG
T ss_pred EEEecccccCHHHHHHHHHHHHhhccccCceEEEECcH
Confidence 468999999999999998888765543 344444443
No 60
>2nsc_A Trigger factor, TF; chaperone; 2.20A {Thermotoga maritima} PDB: 2nsb_A
Probab=26.20 E-value=20 Score=21.11 Aligned_cols=33 Identities=18% Similarity=0.336 Sum_probs=20.9
Q ss_pred eeccccCCc-------ccCCCHHHHHHHHHHHHhHhCCCCc
Q 039804 53 FRQGKVGAW-------KNHLTAEMLQCLDQIVQQKFKDSGF 86 (95)
Q Consensus 53 ~RkG~vG~W-------k~~ft~eq~~~~~~~~~~~l~~~~l 86 (95)
||||+|--. +....+...+.+.+ +.+-+...+|
T Consensus 44 FRkGKvP~~vi~k~yG~~v~~ea~~~~i~~-~~~ai~e~~l 83 (109)
T 2nsc_A 44 FRKGRIPKNVLKMKLGEEFQEYTLDFLMDL-IPDTLKDRKL 83 (109)
T ss_dssp SCTTCCCHHHHHHHHGGGHHHHHHHHHHTT-HHHHTTTSCC
T ss_pred cCCCCCCHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHcCc
Confidence 788877221 34555666666777 7777776665
No 61
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=25.65 E-value=44 Score=22.93 Aligned_cols=17 Identities=6% Similarity=-0.005 Sum_probs=15.1
Q ss_pred ccCCCHHHHHHHHHHHH
Q 039804 62 KNHLTAEMLQCLDQIVQ 78 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~ 78 (95)
.++||+.|.+||...+.
T Consensus 238 ~~~FT~gQ~~RM~~~~~ 254 (262)
T 2cki_A 238 MVMFTQGQATRVNACLD 254 (262)
T ss_dssp CCBCBHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHH
Confidence 46899999999998887
No 62
>1gks_A Cytochrome C551; halophilic purple phototrophic bacterium, electron transport; HET: HEM; NMR {Halorhodospira halophila} SCOP: a.3.1.1
Probab=25.64 E-value=51 Score=17.39 Aligned_cols=22 Identities=14% Similarity=0.021 Sum_probs=17.9
Q ss_pred CCcccCCCHHHHHHHHHHHHhH
Q 039804 59 GAWKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 59 G~Wk~~ft~eq~~~~~~~~~~~ 80 (95)
-.|...||+++++.+-.++...
T Consensus 56 p~~~~~Lsd~ei~~l~~yi~~~ 77 (78)
T 1gks_A 56 PAYDGRADREDLVKAIEYMLST 77 (78)
T ss_dssp CCCBTTBCHHHHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHHHHHHhh
Confidence 3566789999999999988754
No 63
>2hi3_A Homeodomain-only protein; transcription; NMR {Mus musculus} SCOP: a.4.1.1
Probab=25.61 E-value=81 Score=16.75 Aligned_cols=21 Identities=10% Similarity=0.056 Sum_probs=17.2
Q ss_pred CCcccCCCHHHHHHHHHHHHh
Q 039804 59 GAWKNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 59 G~Wk~~ft~eq~~~~~~~~~~ 79 (95)
|.=+..||++|+..++..+..
T Consensus 3 ~k~Rt~ft~~Q~~~Le~~F~~ 23 (73)
T 2hi3_A 3 AQTVSGPTEDQVEILEYNFNK 23 (73)
T ss_dssp CSCCSSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHh
Confidence 444678999999999999873
No 64
>2l7z_A Homeobox protein HOX-A13; gene regulation; NMR {Homo sapiens} PDB: 2ld5_A*
Probab=25.59 E-value=61 Score=17.32 Aligned_cols=20 Identities=15% Similarity=0.046 Sum_probs=16.6
Q ss_pred cccCCCHHHHHHHHHHHHhH
Q 039804 61 WKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 61 Wk~~ft~eq~~~~~~~~~~~ 80 (95)
-+..||++|+..++..+...
T Consensus 10 ~Rt~ft~~Q~~~Le~~F~~~ 29 (73)
T 2l7z_A 10 KRVPYTKVQLKELEREYATN 29 (73)
T ss_dssp CCCCSCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHhhC
Confidence 45689999999999998764
No 65
>2h1k_A IPF-1, pancreatic and duodenal homeobox 1, homeodomain; protein-DNA complex, transcription/DNA complex; 2.42A {Mesocricetus auratus}
Probab=25.36 E-value=77 Score=16.25 Aligned_cols=20 Identities=15% Similarity=0.026 Sum_probs=16.4
Q ss_pred cccCCCHHHHHHHHHHHHhH
Q 039804 61 WKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 61 Wk~~ft~eq~~~~~~~~~~~ 80 (95)
-+..||++|+..++..+...
T Consensus 6 ~Rt~ft~~Q~~~Le~~F~~~ 25 (63)
T 2h1k_A 6 TRTAYTRAQLLELEKEFLFN 25 (63)
T ss_dssp CCCCCCHHHHHHHHHHHHHC
T ss_pred CCCCcCHHHHHHHHHHHhcC
Confidence 35689999999999988753
No 66
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=25.21 E-value=50 Score=22.60 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=26.0
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHhCC--CCceeeccc
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKFKD--SGFVTLKMF 92 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l~~--~~l~f~~~~ 92 (95)
.+|+||-+.|.++...+-+.+...+.. .++-..|.+
T Consensus 8 i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~ 45 (250)
T 2j27_A 8 AAANWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTF 45 (250)
T ss_dssp EEEECCBCCCHHHHHHHHHHHHTCCCCSCCEEEEECCG
T ss_pred EEEECccccCHHHHHHHHHHHHhhccccCceEEEeCCH
Confidence 468999999999999998888765543 344444443
No 67
>1fjl_A Paired protein; DNA-binding protein, paired BOX, transcription regulation; HET: DNA; 2.00A {Drosophila melanogaster} SCOP: a.4.1.1 PDB: 3a01_B
Probab=24.46 E-value=69 Score=17.40 Aligned_cols=21 Identities=14% Similarity=0.268 Sum_probs=17.3
Q ss_pred CcccCCCHHHHHHHHHHHHhH
Q 039804 60 AWKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 60 ~Wk~~ft~eq~~~~~~~~~~~ 80 (95)
.-+..||++|+..++.++...
T Consensus 20 r~Rt~ft~~Q~~~Le~~F~~~ 40 (81)
T 1fjl_A 20 RSRTTFSASQLDELERAFERT 40 (81)
T ss_dssp CCCCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHHHc
Confidence 346689999999999998753
No 68
>1uhs_A HOP, homeodomain only protein; structural genomics, cardiac development, riken structural genomics/proteomics initiative, RSGI, transcription; NMR {Mus musculus} SCOP: a.4.1.1
Probab=24.46 E-value=66 Score=17.03 Aligned_cols=18 Identities=11% Similarity=0.241 Sum_probs=15.2
Q ss_pred ccCCCHHHHHHHHHHHHh
Q 039804 62 KNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~ 79 (95)
+..||++|+..++..+..
T Consensus 5 Rt~ft~~Q~~~Le~~F~~ 22 (72)
T 1uhs_A 5 AATMTEDQVEILEYNFNK 22 (72)
T ss_dssp CCCCCHHHHHHHHHHHHS
T ss_pred CccCCHHHHHHHHHHHHc
Confidence 457999999999999874
No 69
>2da3_A Alpha-fetoprotein enhancer binding protein; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics; NMR {Homo sapiens}
Probab=24.06 E-value=32 Score=18.67 Aligned_cols=20 Identities=25% Similarity=0.218 Sum_probs=16.4
Q ss_pred cccCCCHHHHHHHHHHHHhH
Q 039804 61 WKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 61 Wk~~ft~eq~~~~~~~~~~~ 80 (95)
-+..||++|++.++.++...
T Consensus 20 ~Rt~ft~~Ql~~Le~~f~~~ 39 (80)
T 2da3_A 20 LRTTITPEQLEILYQKYLLD 39 (80)
T ss_dssp CCSSCCTTTHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHhc
Confidence 35689999999999988754
No 70
>1ftt_A TTF-1 HD, thyroid transcription factor 1 homeodomain; DNA binding protein; NMR {Rattus norvegicus} SCOP: a.4.1.1
Probab=23.99 E-value=75 Score=16.61 Aligned_cols=19 Identities=11% Similarity=0.170 Sum_probs=15.8
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++..+...
T Consensus 6 Rt~ft~~Q~~~Le~~F~~~ 24 (68)
T 1ftt_A 6 RVLFSQAQVYELERRFKQQ 24 (68)
T ss_dssp CSSCCHHHHHHHHHHHHHS
T ss_pred CCccCHHHHHHHHHHHHhC
Confidence 4579999999999988753
No 71
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=23.98 E-value=58 Score=22.44 Aligned_cols=25 Identities=12% Similarity=0.151 Sum_probs=20.6
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHh
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKF 81 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l 81 (95)
++|+||-+.|.+....+-+.+....
T Consensus 7 i~gNwKmn~~~~~~~~l~~~l~~~~ 31 (259)
T 2i9e_A 7 VGGNWKMNGDKKQINEIIGFLKSGP 31 (259)
T ss_dssp EEEECCBCCCHHHHHHHHHHHHHSC
T ss_pred EEEecccccCHHHHHHHHHHHhhhc
Confidence 4689999999999999888776533
No 72
>1mnm_C Protein (MAT alpha-2 transcriptional repressor); transcription regulation, transcriptional repression, DNA- binding protein; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.1
Probab=23.72 E-value=71 Score=17.64 Aligned_cols=19 Identities=16% Similarity=0.277 Sum_probs=17.1
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||.+|...++.++...
T Consensus 31 r~~ft~~q~~~Le~~f~~~ 49 (87)
T 1mnm_C 31 GHRFTKENVRILESWFAKN 49 (87)
T ss_dssp TCCCCHHHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHHHHHh
Confidence 6789999999999999873
No 73
>2kt0_A Nanog, homeobox protein nanog; homeodomain, structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; NMR {Homo sapiens}
Probab=23.22 E-value=75 Score=17.30 Aligned_cols=21 Identities=14% Similarity=0.207 Sum_probs=17.3
Q ss_pred CcccCCCHHHHHHHHHHHHhH
Q 039804 60 AWKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 60 ~Wk~~ft~eq~~~~~~~~~~~ 80 (95)
.-+..||++|+..++..+...
T Consensus 24 r~Rt~ft~~Q~~~Le~~F~~~ 44 (84)
T 2kt0_A 24 KTRTVFSSTQLCVLNDRFQRQ 44 (84)
T ss_dssp CCSSCCCHHHHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHHHHhC
Confidence 456789999999999988653
No 74
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=23.20 E-value=74 Score=22.02 Aligned_cols=27 Identities=26% Similarity=0.314 Sum_probs=22.4
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHhCC
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKFKD 83 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l~~ 83 (95)
.+|+||=+.|.+....+-+.+...+..
T Consensus 7 i~gNWKMn~~~~~~~~l~~~l~~~~~~ 33 (267)
T 3ta6_A 7 IAGNWKMNLNHYEAIALVQKIAFSLPD 33 (267)
T ss_dssp EEEECCBCCCHHHHHHHHHHHHHHSCG
T ss_pred EEEEhhhccCHHHHHHHHHHHHHhccc
Confidence 579999999999998888888776643
No 75
>1nk2_P Homeobox protein VND; homeodomain, DNA-binding protein, embryonic development, complex (homeodomain/DNA); HET: DNA; NMR {Drosophila melanogaster} SCOP: a.4.1.1 PDB: 1nk3_P* 1vnd_A 1qry_A
Probab=23.16 E-value=76 Score=17.05 Aligned_cols=19 Identities=16% Similarity=0.130 Sum_probs=16.1
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||++|+..++..+...
T Consensus 13 Rt~ft~~Q~~~Le~~F~~~ 31 (77)
T 1nk2_P 13 RVLFTKAQTYELERRFRQQ 31 (77)
T ss_dssp CCCCCHHHHHHHHHHHHHC
T ss_pred CccCCHHHHHHHHHHHhhc
Confidence 5689999999999998753
No 76
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=23.16 E-value=61 Score=22.56 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=24.1
Q ss_pred eecc-ccCCcccCCCHHHHHHHHHHHHhHhCC
Q 039804 53 FRQG-KVGAWKNHLTAEMLQCLDQIVQQKFKD 83 (95)
Q Consensus 53 ~RkG-~vG~Wk~~ft~eq~~~~~~~~~~~l~~ 83 (95)
+||= .+|+||-+.|.++...+-+.+...+..
T Consensus 22 mrk~~i~gNWKmn~t~~~~~~l~~~l~~~~~~ 53 (275)
T 1mo0_A 22 TRKFFVGGNWKMNGDYASVDGIVTFLNASADN 53 (275)
T ss_dssp CSCEEEEEECCBCCCHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEecccccCHHHHHHHHHHHhhhccc
Confidence 3543 468999999999999998888765544
No 77
>1x2n_A Homeobox protein pknox1; homeobox domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=23.02 E-value=78 Score=16.73 Aligned_cols=19 Identities=11% Similarity=0.130 Sum_probs=16.4
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||.+|+..++.++.+.
T Consensus 11 R~~~~~~q~~~Le~~f~~~ 29 (73)
T 1x2n_A 11 RGVLPKHATNVMRSWLFQH 29 (73)
T ss_dssp SCCCCHHHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHHHHHh
Confidence 5689999999999999763
No 78
>3rkq_A Homeobox protein NKX-2.5; helix-turn-helix, DNA binding, nucleus, transcription-DNA CO; 1.70A {Homo sapiens}
Probab=22.90 E-value=57 Score=16.20 Aligned_cols=18 Identities=11% Similarity=0.152 Sum_probs=15.0
Q ss_pred ccCCCHHHHHHHHHHHHh
Q 039804 62 KNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~ 79 (95)
+..||++|...++..+..
T Consensus 6 Rt~~t~~q~~~Le~~F~~ 23 (58)
T 3rkq_A 6 RVLFSQAQVYELERRFKQ 23 (58)
T ss_dssp CCCCCHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHH
Confidence 568999999999988764
No 79
>1puf_A HOX-1.7, homeobox protein HOX-A9; homeodomian, protein-DNA complex, HOX hexapeptide, TALE homeodomain, homeodomain interaction; 1.90A {Mus musculus} SCOP: a.4.1.1 PDB: 1san_A
Probab=22.68 E-value=79 Score=16.99 Aligned_cols=21 Identities=10% Similarity=-0.097 Sum_probs=16.9
Q ss_pred CcccCCCHHHHHHHHHHHHhH
Q 039804 60 AWKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 60 ~Wk~~ft~eq~~~~~~~~~~~ 80 (95)
.=+..||.+|+..++..+...
T Consensus 15 r~Rt~ft~~Q~~~Le~~F~~~ 35 (77)
T 1puf_A 15 KKRCPYTKHQTLELEKEFLFN 35 (77)
T ss_dssp CCCCCCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHhcc
Confidence 345689999999999988753
No 80
>2cue_A Paired box protein PAX6; homeobox domain, transcription factor, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=22.62 E-value=53 Score=17.87 Aligned_cols=18 Identities=17% Similarity=0.440 Sum_probs=15.3
Q ss_pred ccCCCHHHHHHHHHHHHh
Q 039804 62 KNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~ 79 (95)
+..||++|+..++..+..
T Consensus 11 Rt~ft~~Q~~~Le~~F~~ 28 (80)
T 2cue_A 11 RTSFTQEQIEALEKEFER 28 (80)
T ss_dssp CCCSCHHHHHHHHHHHTT
T ss_pred CCccCHHHHHHHHHHHhc
Confidence 568999999999988864
No 81
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=22.56 E-value=52 Score=22.57 Aligned_cols=26 Identities=19% Similarity=0.150 Sum_probs=20.8
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHhC
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKFK 82 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l~ 82 (95)
.+|+||-+.|.++...+-+.+...+.
T Consensus 5 i~gNwKmn~~~~~~~~~~~~l~~~~~ 30 (252)
T 2btm_A 5 IAGNWKMNGTLAEAVQFVEDVKGHVP 30 (252)
T ss_dssp EEEECCBCCCHHHHHHHHHHHTTTSC
T ss_pred EEEEcccccCHHHHHHHHHHHHhhcc
Confidence 46899999999988888877765444
No 82
>1ayg_A Cytochrome C-552; electron transport, porphyrin, ferrous iron; HET: HEC; NMR {Hydrogenobacter thermophilus} SCOP: a.3.1.1 PDB: 1ynr_A* 2ai5_A*
Probab=22.45 E-value=83 Score=16.39 Aligned_cols=16 Identities=19% Similarity=0.156 Sum_probs=13.5
Q ss_pred CCCHHHHHHHHHHHHh
Q 039804 64 HLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 64 ~ft~eq~~~~~~~~~~ 79 (95)
.||+++++.+-.++..
T Consensus 63 ~Lsd~ei~~l~~yl~~ 78 (80)
T 1ayg_A 63 NVTDAEAKQLAQWILS 78 (80)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 6999999999888764
No 83
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=22.11 E-value=63 Score=22.20 Aligned_cols=36 Identities=11% Similarity=0.087 Sum_probs=24.9
Q ss_pred ccCCcccCCCHHHHHHHHHHHHh-HhC-CCCceeeccc
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQ-KFK-DSGFVTLKMF 92 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~-~l~-~~~l~f~~~~ 92 (95)
.+|+||-+.|.++...+-+.+.. .+. +.++-..|.+
T Consensus 8 i~gNwKmn~~~~~~~~l~~~l~~~~~~~~vev~v~Pp~ 45 (257)
T 2yc6_A 8 IGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSA 45 (257)
T ss_dssp EEEECCSCCCHHHHHHHHHHHHTSCCCTTSEEEEECCG
T ss_pred EEEECccccCHHHHHHHHHHHhhcccccCceEEEeCCH
Confidence 46899999999999988887765 343 2344444433
No 84
>2k40_A Homeobox expressed in ES cells 1; thermostable homeodomain variant, DNA binding protein, developmental protein, disease mutation, DNA-binding; NMR {Homo sapiens}
Probab=22.03 E-value=59 Score=16.92 Aligned_cols=18 Identities=11% Similarity=0.403 Sum_probs=14.8
Q ss_pred ccCCCHHHHHHHHHHHHh
Q 039804 62 KNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~ 79 (95)
+..||++|+..++.++..
T Consensus 5 Rt~ft~~q~~~Le~~F~~ 22 (67)
T 2k40_A 5 RTAFTQNQIEVLENVFRV 22 (67)
T ss_dssp SCCCCHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHh
Confidence 457999999999988864
No 85
>1zq3_P PRD-4, homeotic bicoid protein; protein-DNA complex, double helix, helix-turn-helix; NMR {Drosophila melanogaster} SCOP: a.4.1.1
Probab=21.97 E-value=59 Score=17.05 Aligned_cols=18 Identities=22% Similarity=0.292 Sum_probs=14.9
Q ss_pred ccCCCHHHHHHHHHHHHh
Q 039804 62 KNHLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~ 79 (95)
+..||++|+..++..+..
T Consensus 6 Rt~ft~~Q~~~Le~~F~~ 23 (68)
T 1zq3_P 6 RTTFTSSQIAELEQHFLQ 23 (68)
T ss_dssp SCCCCHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHhc
Confidence 457999999999988765
No 86
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=21.95 E-value=69 Score=22.24 Aligned_cols=29 Identities=31% Similarity=0.220 Sum_probs=23.4
Q ss_pred eec-cccCCcccCCCHHHHHHHHHHHHhHh
Q 039804 53 FRQ-GKVGAWKNHLTAEMLQCLDQIVQQKF 81 (95)
Q Consensus 53 ~Rk-G~vG~Wk~~ft~eq~~~~~~~~~~~l 81 (95)
+|| =.+|+||-+.|.+....+-+.+...+
T Consensus 25 Mrk~~i~gNWKMn~t~~~~~~l~~~l~~~~ 54 (272)
T 4g1k_A 25 QRIKRVIGNWKMHGRLSGNQALLTEVAQGA 54 (272)
T ss_dssp CCCEEEEEECCBCCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEhhhCcCHHHHHHHHHHHHhcc
Confidence 344 35699999999999999988888765
No 87
>1wh7_A ZF-HD homeobox family protein; homeobox domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.4.1.1
Probab=21.80 E-value=88 Score=17.24 Aligned_cols=20 Identities=15% Similarity=0.258 Sum_probs=15.9
Q ss_pred CcccCCCHHHHHHHHHHHHhH
Q 039804 60 AWKNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 60 ~Wk~~ft~eq~~~~~~~~~~~ 80 (95)
.-+..||.+|++.++ .+.++
T Consensus 19 R~Rt~ft~~Ql~~Le-~F~~~ 38 (80)
T 1wh7_A 19 RFRTKFTAEQKEKML-AFAER 38 (80)
T ss_dssp CCCCCCCHHHHHHHH-HHHHH
T ss_pred CCCccCCHHHHHHHH-HHHHH
Confidence 346789999999999 57764
No 88
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=21.44 E-value=56 Score=22.34 Aligned_cols=26 Identities=19% Similarity=0.174 Sum_probs=21.6
Q ss_pred ccCCcccCCCHHHHHHHHHHHHhHhC
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQQKFK 82 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~~~l~ 82 (95)
.+|+||-+.|.++...+-+.+...+.
T Consensus 7 i~gNwKmn~~~~~~~~l~~~l~~~~~ 32 (248)
T 1o5x_A 7 VAANWKCNGTLESIKSLTNSFNNLDF 32 (248)
T ss_dssp EEEECCBCCCHHHHHHHHHHHHTSCC
T ss_pred EEEecCcccCHHHHHHHHHHHHhhcc
Confidence 46899999999999998888876554
No 89
>1cch_A Cytochrome C551; electron transport; HET: HEM; NMR {Pseudomonas stutzeri} SCOP: a.3.1.1 PDB: 1fi3_A* 2i8f_A* 1cor_A*
Probab=21.38 E-value=89 Score=16.13 Aligned_cols=16 Identities=25% Similarity=0.202 Sum_probs=13.3
Q ss_pred CCCHHHHHHHHHHHHh
Q 039804 64 HLTAEMLQCLDQIVQQ 79 (95)
Q Consensus 64 ~ft~eq~~~~~~~~~~ 79 (95)
.||+++++.+-.++..
T Consensus 65 ~ls~~ei~~l~~yl~~ 80 (82)
T 1cch_A 65 PVTEEEAKILAEWVLS 80 (82)
T ss_dssp SCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 6999999998888753
No 90
>2dmn_A Homeobox protein TGIF2LX; TGFB-induced factor 2-like protein, X-linked TGF(beta) induced transcription factor 2-like protein, TGIF-like on the X; NMR {Homo sapiens}
Probab=21.37 E-value=87 Score=17.21 Aligned_cols=19 Identities=26% Similarity=0.361 Sum_probs=16.4
Q ss_pred ccCCCHHHHHHHHHHHHhH
Q 039804 62 KNHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~ 80 (95)
+..||.+|...++.|+.+.
T Consensus 11 R~~~s~~q~~~L~~~f~~~ 29 (83)
T 2dmn_A 11 KGNLPAESVKILRDWMYKH 29 (83)
T ss_dssp CSSCCHHHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHHHHHh
Confidence 4579999999999999874
No 91
>3bd9_A Heparan sulfate glucosamine 3-O-sulfotransferase 5; heparan sulfate biosynthesis, substrate specificity, glycoprotein, golgi apparatus, membrane; HET: A3P; 2.30A {Homo sapiens}
Probab=21.36 E-value=79 Score=21.03 Aligned_cols=30 Identities=7% Similarity=0.104 Sum_probs=21.4
Q ss_pred eeeccccCCcccCCCHHHHHHHHHHHHhHhC
Q 039804 52 YFRQGKVGAWKNHLTAEMLQCLDQIVQQKFK 82 (95)
Q Consensus 52 f~RkG~vG~Wk~~ft~eq~~~~~~~~~~~l~ 82 (95)
+++++ .|.|+..+++++.+++.+.+++...
T Consensus 238 ~l~~~-k~~~~~~l~~~~~~~L~~~f~p~~~ 267 (280)
T 3bd9_A 238 CLAGS-KGRIHPEVDPSVITKLRKFFHPFNQ 267 (280)
T ss_dssp CCC-----CCCCCCCHHHHHHHHHHHHHHHH
T ss_pred hhccc-cCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 44444 4789999999999999999886543
No 92
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=21.19 E-value=75 Score=16.88 Aligned_cols=21 Identities=14% Similarity=0.290 Sum_probs=14.5
Q ss_pred ccCCCHHHHHHHHHHHHhHhC
Q 039804 62 KNHLTAEMLQCLDQIVQQKFK 82 (95)
Q Consensus 62 k~~ft~eq~~~~~~~~~~~l~ 82 (95)
|+.||++|.+.+-+.+.+-.+
T Consensus 2 kd~lt~eq~~aILkaLdeaIe 22 (57)
T 3fxd_A 2 KDQLSDEQKETILKALNDAIE 22 (57)
T ss_dssp --CCCHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHH
Confidence 678999999888777666543
No 93
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=21.16 E-value=63 Score=22.24 Aligned_cols=22 Identities=27% Similarity=0.332 Sum_probs=18.9
Q ss_pred ccCCcccCCCHHHHHHHHHHHH
Q 039804 57 KVGAWKNHLTAEMLQCLDQIVQ 78 (95)
Q Consensus 57 ~vG~Wk~~ft~eq~~~~~~~~~ 78 (95)
.+|+||-+.|.++...+-+.+.
T Consensus 8 i~gNwKmn~~~~~~~~l~~~l~ 29 (261)
T 1m6j_A 8 VGGNWKCNGTLASIETLTKGVA 29 (261)
T ss_dssp EEEECCBCCCHHHHHHHHHHHH
T ss_pred EEEEcccccCHHHHHHHHHHHH
Confidence 4689999999999988877776
No 94
>2d3o_1 Trigger factor, TF; ribosome, nascent chain, protein folding, SRP; 3.35A {Deinococcus radiodurans} PDB: 2aar_7
Probab=20.82 E-value=51 Score=19.34 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=20.3
Q ss_pred eeccccCCc--------ccCCCHHHHHHHHHHHHhHhCCCCc
Q 039804 53 FRQGKVGAW--------KNHLTAEMLQCLDQIVQQKFKDSGF 86 (95)
Q Consensus 53 ~RkG~vG~W--------k~~ft~eq~~~~~~~~~~~l~~~~l 86 (95)
||||+|--. .....+...+.+.+.+.+-+...+|
T Consensus 43 FRkGKvP~~vi~k~yG~~~v~~ea~~~~i~~~~~~ai~e~~l 84 (112)
T 2d3o_1 43 FRPGKAPRKVIENRVGKGYVESQVRDRLLETHYSQGLRELGL 84 (112)
T ss_dssp BCTTCCCSTTHHHHTTTTSSHHHHHHHHHHHHHHHHHHHSCC
T ss_pred cCCCCCCHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 788887543 2244455666666666666655544
No 95
>2l48_A N-acetylmuramoyl-L-alanine amidase; bacillus anthracis gamma- phage endolysin, PLYG, cell WALL B domain, homodimer, ACT-type domain; NMR {Bacillus phage gamma}
Probab=20.36 E-value=86 Score=18.03 Aligned_cols=18 Identities=11% Similarity=0.303 Sum_probs=16.1
Q ss_pred cCCCHHHHHHHHHHHHhH
Q 039804 63 NHLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 63 ~~ft~eq~~~~~~~~~~~ 80 (95)
+.++..|+.+|.+|+.++
T Consensus 61 ~~~s~~eLdk~t~wLD~r 78 (85)
T 2l48_A 61 KPTSDAQLKAMKEYLDRK 78 (85)
T ss_dssp CCCCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHhcc
Confidence 478999999999999986
No 96
>3a03_A T-cell leukemia homeobox protein 2; homeodomain, developmental protein, DNA-binding, N gene regulation; 1.54A {Homo sapiens}
Probab=20.22 E-value=87 Score=15.64 Aligned_cols=17 Identities=6% Similarity=0.128 Sum_probs=13.7
Q ss_pred CCCHHHHHHHHHHHHhH
Q 039804 64 HLTAEMLQCLDQIVQQK 80 (95)
Q Consensus 64 ~ft~eq~~~~~~~~~~~ 80 (95)
.||++|+..++..+...
T Consensus 3 ~ft~~Ql~~Le~~F~~~ 19 (56)
T 3a03_A 3 SFSRSQVLELERRFLRQ 19 (56)
T ss_dssp -CCHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHhc
Confidence 58999999999988753
Done!