BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039810
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O48650|SUI1_SALBA Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1
Length = 113
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/113 (92%), Positives = 110/113 (97%)
Query: 1 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKIL 60
MSEFD IP+AFDPFAEANAEDSGAG+KDYVH+RVQQRNGRKSLTTVQGLKK++SYNKIL
Sbjct: 1 MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKIL 60
Query: 61 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS+FLVQAGIVKKE IKIHGF
Sbjct: 61 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
>sp|Q0D5W6|SUI1_ORYSJ Protein translation factor SUI1 homolog OS=Oryza sativa subsp.
japonica GN=GOS2 PE=3 SV=1
Length = 115
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/115 (90%), Positives = 108/115 (93%), Gaps = 2/115 (1%)
Query: 1 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNK 58
MS+ D QIP+AFDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNK
Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60
Query: 59 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKE IKIHGF
Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>sp|A6MZM2|SUI1_ORYSI Protein translation factor SUI1 homolog OS=Oryza sativa subsp.
indica GN=GOS2 PE=2 SV=1
Length = 115
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/115 (90%), Positives = 108/115 (93%), Gaps = 2/115 (1%)
Query: 1 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNK 58
MS+ D QIP+AFDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNK
Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60
Query: 59 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKE IKIHGF
Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>sp|P41568|SUI11_ARATH Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana
GN=At4g27130 PE=3 SV=2
Length = 113
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 100/113 (88%), Positives = 109/113 (96%)
Query: 1 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKIL 60
MSE D+Q+P+AFDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY KIL
Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60
Query: 61 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+ IKIHGF
Sbjct: 61 KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
>sp|Q9SM41|SUI1_SPOST Protein translation factor SUI1 homolog OS=Sporobolus stapfianus
PE=3 SV=1
Length = 115
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 103/115 (89%), Positives = 108/115 (93%), Gaps = 2/115 (1%)
Query: 1 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNK 58
MS+ D QIP+AFDPF+EANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNK
Sbjct: 1 MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60
Query: 59 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKE IKIHGF
Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>sp|P56330|SUI1_MAIZE Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3
SV=1
Length = 115
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 103/115 (89%), Positives = 108/115 (93%), Gaps = 2/115 (1%)
Query: 1 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNK 58
MS+ D QIP+AFDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSY+K
Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60
Query: 59 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAGIVKKE IKIHGF
Sbjct: 61 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>sp|Q9SQF4|SUI1_BRAOL Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3
SV=1
Length = 113
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/113 (87%), Positives = 109/113 (96%)
Query: 1 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKIL 60
MSE D+Q+P+AFDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY KIL
Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60
Query: 61 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+ I+IHGF
Sbjct: 61 KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
>sp|Q94JV4|SUI12_ARATH Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana
GN=At1g54290 PE=3 SV=1
Length = 113
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/113 (86%), Positives = 109/113 (96%)
Query: 1 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKIL 60
MS+ + Q+P+AFDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY+KIL
Sbjct: 1 MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60
Query: 61 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
KDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK+ IKIHGF
Sbjct: 61 KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
>sp|O82569|SUI1_PIMBR Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa
PE=3 SV=1
Length = 113
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 97/113 (85%)
Query: 1 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKIL 60
M + D QIP++FDPFAEA D+ +K+YVHIR+QQRNGRKSLTTVQGLKKE SY+KIL
Sbjct: 1 MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKIL 60
Query: 61 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
KDLKK CCNGTVV D ELG+VIQLQGDQRKNVSTF+VQAGIVKK+ IK+H F
Sbjct: 61 KDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113
>sp|P61220|EIF1B_PIG Eukaryotic translation initiation factor 1b OS=Sus scrofa GN=EIF1B
PE=3 SV=1
Length = 113
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 84/105 (80%), Gaps = 2/105 (1%)
Query: 11 AFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 68
+FDPFA+A D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F
Sbjct: 9 SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68
Query: 69 CNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
CNGTV++ PE G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF
Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>sp|Q9CXU9|EIF1B_MOUSE Eukaryotic translation initiation factor 1b OS=Mus musculus
GN=Eif1b PE=2 SV=2
Length = 113
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 84/105 (80%), Gaps = 2/105 (1%)
Query: 11 AFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 68
+FDPFA+A D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F
Sbjct: 9 SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68
Query: 69 CNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
CNGTV++ PE G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF
Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>sp|Q4R4X9|EIF1B_MACFA Eukaryotic translation initiation factor 1b OS=Macaca fascicularis
GN=EIF1B PE=3 SV=1
Length = 113
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 84/105 (80%), Gaps = 2/105 (1%)
Query: 11 AFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 68
+FDPFA+A D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F
Sbjct: 9 SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68
Query: 69 CNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
CNGTV++ PE G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF
Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>sp|O60739|EIF1B_HUMAN Eukaryotic translation initiation factor 1b OS=Homo sapiens
GN=EIF1B PE=1 SV=2
Length = 113
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 84/105 (80%), Gaps = 2/105 (1%)
Query: 11 AFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 68
+FDPFA+A D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F
Sbjct: 9 SFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68
Query: 69 CNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
CNGTV++ PE G+VIQLQGDQRKN+ FL++ GIVK+E +K+HGF
Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>sp|P32911|SUI1_YEAST Eukaryotic translation initiation factor eIF-1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SUI1 PE=1
SV=1
Length = 108
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
Query: 11 AFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 70
+FDPFA+ D + +Y+HIR+QQRNGRK+LTTVQG+ +E+ +ILK LKK+F CN
Sbjct: 8 SFDPFADTG--DDETATSNYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFACN 65
Query: 71 GTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
G +V+DPE+G++IQLQGDQR V F++ ++K+ IKIHGF
Sbjct: 66 GNIVKDPEMGEIIQLQGDQRAKVCEFMISQLGLQKKNIKIHGF 108
>sp|Q5RFF4|EIF1_PONAB Eukaryotic translation initiation factor 1 OS=Pongo abelii GN=EIF1
PE=3 SV=1
Length = 113
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Query: 11 AFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 68
+FDPFA+A+ D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F
Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68
Query: 69 CNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
CNGTV++ PE G+VIQLQGDQRKN+ FLV+ G+ K + +K+HGF
Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>sp|P41567|EIF1_HUMAN Eukaryotic translation initiation factor 1 OS=Homo sapiens GN=EIF1
PE=1 SV=1
Length = 113
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Query: 11 AFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 68
+FDPFA+A+ D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F
Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68
Query: 69 CNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
CNGTV++ PE G+VIQLQGDQRKN+ FLV+ G+ K + +K+HGF
Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>sp|Q5E938|EIF1_BOVIN Eukaryotic translation initiation factor 1 OS=Bos taurus GN=EIF1
PE=3 SV=1
Length = 113
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Query: 11 AFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 68
+FDPFA+A+ D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F
Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68
Query: 69 CNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
CNGTV++ PE G+VIQLQGDQRKN+ FLV+ G+ K + +K+HGF
Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
>sp|P48024|EIF1_MOUSE Eukaryotic translation initiation factor 1 OS=Mus musculus GN=Eif1
PE=2 SV=2
Length = 113
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Query: 11 AFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 68
+FDPFA+A+ D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F
Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFA 68
Query: 69 CNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
CNGTV++ PE G+VIQLQGDQRKN+ FL++ G+ K + +K+HGF
Sbjct: 69 CNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF 113
>sp|Q755R1|SUI1_ASHGO Protein translation factor SUI1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SUI1A
PE=3 SV=1
Length = 108
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 77/103 (74%), Gaps = 2/103 (1%)
Query: 11 AFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 70
+FDPFA+ D A S +Y+HIR+QQRNGRK+LTTVQG+ +E+ +ILK L+K+F CN
Sbjct: 8 SFDPFADTG--DDEASSSNYIHIRIQQRNGRKTLTTVQGIPEEYDLKRILKVLRKDFGCN 65
Query: 71 GTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
G +V+D E+G++IQLQGDQR V FL+ + K+ IKIHGF
Sbjct: 66 GNMVKDDEMGEIIQLQGDQRAKVCEFLITQLAIPKKNIKIHGF 108
>sp|P42678|SUI1_ANOGA Protein translation factor SUI1 homolog OS=Anopheles gambiae
GN=AGAP006459 PE=3 SV=1
Length = 110
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%)
Query: 10 SAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCC 69
+ FDPFA+A VHIR+QQRNGRK+LTTVQGL E+ KI++ KKEF C
Sbjct: 7 NTFDPFADAIKGADYDVQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRACKKEFAC 66
Query: 70 NGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
NGTV++ PE G+V+QLQGDQR+N+ +L ++G+ K E +K+HGF
Sbjct: 67 NGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAKPEQLKVHGF 110
>sp|Q9VZS3|SUI1_DROME Protein translation factor SUI1 homolog OS=Drosophila melanogaster
GN=CG17737 PE=1 SV=1
Length = 110
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 73/101 (72%)
Query: 13 DPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGT 72
DPFA+A + VHIR+QQRNGRK+LTTVQGL E+ KI++ KKEF CNGT
Sbjct: 10 DPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSCKKEFACNGT 69
Query: 73 VVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
V++ PE G+V+QLQGDQR+N+ +L + G+ K + +K+HGF
Sbjct: 70 VIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110
>sp|P79060|SUI1_SCHPO Protein translation factor sui1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sui1 PE=3 SV=3
Length = 109
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
Query: 10 SAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCC 69
+ DPFA+ +D A + +HIR+QQRNGRK+LTTVQGL +EF +IL+ LKK+F C
Sbjct: 8 NTVDPFADTGDDD--AQPLNNIHIRIQQRNGRKTLTTVQGLPREFDQKRILRALKKDFAC 65
Query: 70 NGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
NGT+V+D +LG+VIQLQGDQR V FL Q ++K+ IKIHGF
Sbjct: 66 NGTIVKDDDLGEVIQLQGDQRIKVMEFLTQQLGLQKKNIKIHGF 109
>sp|P51971|EIF1_CHICK Eukaryotic translation initiation factor 1 (Fragment) OS=Gallus
gallus GN=EIF1 PE=3 SV=1
Length = 79
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 63/79 (79%)
Query: 35 VQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVS 94
+QQRNGRK+LTTVQG+ ++ K++K KK+F CNGTV++ PE G+VIQLQGDQRKN+
Sbjct: 1 IQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNIC 60
Query: 95 TFLVQAGIVKKEFIKIHGF 113
FLV+ G+ K + +K+HGF
Sbjct: 61 QFLVEIGLAKDDQLKVHGF 79
>sp|Q5UQD7|SUI1_MIMIV Protein translation factor SUI1 homolog OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R464 PE=3 SV=1
Length = 106
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Query: 12 FDPFAEANAEDSGAGSKDY---VHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC 68
+DPF + G ++ + +HI+ +QR KS+T ++ + ++ LK LK F
Sbjct: 7 YDPFND------GLDTEQHFEKIHIKTKQRTKTKSITIIENIPEKIDLKLFLKKLKYTFH 60
Query: 69 CNGTVVQD-PELGQVIQLQGDQRKNVSTFLVQAGIVKKEFIKIHGF 113
C+G++ Q+ + + IQL GD R+ V FL++ IVK+ I +HG+
Sbjct: 61 CSGSIQQNYDDDSKFIQLSGDHRELVKNFLIKNSIVKESNIVMHGY 106
>sp|Q1E556|DENR_COCIM Translation machinery-associated protein 22 OS=Coccidioides immitis
(strain RS) GN=TMA22 PE=3 SV=1
Length = 200
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 31 VHIRVQQRNGRKSLTTVQGLKKE-FSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 89
V I+ +RN RK +T + GL+ K+ K+L K+F +V ++P G+ I +QGD
Sbjct: 106 VQIKRVERNKRKHVTVIAGLEAHGLDNKKVAKELGKKFATGSSVTKNPAGGEEITVQGDV 165
Query: 90 RKNVSTFLVQ 99
++V +LV+
Sbjct: 166 CEDVLEWLVE 175
>sp|Q97BW9|SUI1_THEVO Protein translation factor SUI1 homolog OS=Thermoplasma volcanium
(strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 /
GSS1) GN=TV0336 PE=3 SV=1
Length = 100
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 6 TQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFS-YNKILKDLK 64
T +P P+ E ++ A V I V +R K +T ++G+ + KI K+LK
Sbjct: 7 TGMPKELQPW-EGFGREAQA-----VKIVVDKRRYGKFVTIIEGIDPKIEDIEKIAKELK 60
Query: 65 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 101
K+ GTV + G++I+LQGD R+ V FL G
Sbjct: 61 KKVASGGTVKE----GRIIELQGDHRQEVKKFLEDMG 93
>sp|Q2H5Z7|DENR_CHAGB Translation machinery-associated protein 22 OS=Chaetomium globosum
(strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /
NRRL 1970) GN=TMA22 PE=3 SV=1
Length = 188
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 SKDYVHIRVQQRNGRKSLTTVQGLKK-EFSYNKILKDLKKEFCCNGTVVQDPELGQVIQL 85
+K V I+ +RN RK +T+V GL+ K+ KD K+F +V + P G+ I +
Sbjct: 92 AKSVVTIKRIERNKRKFVTSVTGLEAFGLELKKVAKDFGKKFATGASVTKVPSGGEEIVV 151
Query: 86 QGDQRKNVSTFLVQ 99
QGD + FL++
Sbjct: 152 QGDVSGEIEEFLLE 165
>sp|Q5UZP9|SUI1_HALMA Protein translation factor SUI1 homolog OS=Haloarcula marismortui
(strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
GN=sui1 PE=3 SV=1
Length = 97
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 31 VHIRVQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 89
++IR+ +R K +T ++G K+ + + DLK +F C GTV E GQ I+LQG+
Sbjct: 27 INIRIDERRYGKEVTIIEGFDPKDVDMDSLSSDLKSKFACGGTV----EDGQ-IELQGNH 81
Query: 90 RKNVSTFLVQAG 101
V FL G
Sbjct: 82 TGRVEDFLRDKG 93
>sp|Q9P3T4|DENR_NEUCR Translation machinery-associated protein 22 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=tma-22 PE=3 SV=1
Length = 187
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 31 VHIRVQQRNGRKSLTTVQGLKK-EFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 89
V I+ +RN RK +T+V GL+ K+ KD K+F +V + P G+ I +QGD
Sbjct: 94 VTIKRIERNKRKYVTSVSGLEAFGLELKKVAKDFGKKFATGSSVTKVPSGGEEIVVQGDV 153
Query: 90 RKNVSTFLVQ 99
+ F+++
Sbjct: 154 SGEIEEFILE 163
>sp|Q9HME3|SUI1_HALSA Protein translation factor SUI1 homolog OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=VNG_2584C
PE=3 SV=1
Length = 97
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 31 VHIRVQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 89
+ IR+ +R K +T ++G K+ + + DLK +F C GT V+D E I+LQG+
Sbjct: 27 IEIRIDERRYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGGT-VEDGE----IELQGNH 81
Query: 90 RKNVSTFLVQAG 101
V FL G
Sbjct: 82 SGRVEDFLRNKG 93
>sp|B0R868|SUI1_HALS3 Protein translation factor SUI1 homolog OS=Halobacterium salinarum
(strain ATCC 29341 / DSM 671 / R1) GN=OE_4626R PE=3 SV=1
Length = 97
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 31 VHIRVQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 89
+ IR+ +R K +T ++G K+ + + DLK +F C GT V+D E I+LQG+
Sbjct: 27 IEIRIDERRYGKEVTVIEGFDPKDVDLDSLSSDLKSKFACGGT-VEDGE----IELQGNH 81
Query: 90 RKNVSTFLVQAG 101
V FL G
Sbjct: 82 SGRVEDFLRNKG 93
>sp|A1DAY1|DENR_NEOFI Translation machinery-associated protein 22 OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=tma22 PE=3 SV=1
Length = 194
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 31 VHIRVQQRNGRKSLTTVQGLKKEFSYNK-ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 89
V I+ +RN RK +T + GL+ NK + K+L K+F +V + P + I +QGD
Sbjct: 102 VQIKRVERNKRKHVTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDV 161
Query: 90 RKNVSTFLVQ 99
++V +L++
Sbjct: 162 SEDVQEWLLE 171
>sp|Q4WBL6|DENR_ASPFU Translation machinery-associated protein 22 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=tma22 PE=3 SV=2
Length = 194
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 31 VHIRVQQRNGRKSLTTVQGLKKEFSYNK-ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 89
V I+ +RN RK +T + GL+ NK + K+L K+F +V + P + I +QGD
Sbjct: 102 VQIKRVERNKRKHVTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDV 161
Query: 90 RKNVSTFLVQ 99
++V +L++
Sbjct: 162 SEDVKEWLLE 171
>sp|Q4JAE7|SUI1_SULAC Protein translation factor SUI1 homolog OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_0865 PE=3 SV=1
Length = 99
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 30 YVHIRVQQRNGRKSLTTVQGLKK-EFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGD 88
++ I+V++R K +T V+G+ E KI +LK + GTV I+LQGD
Sbjct: 22 FIKIKVEKRRYGKEVTIVEGISNDETELKKIASELKSKLAAGGTVKNGK-----IELQGD 76
Query: 89 QRKNVSTFLVQAG 101
R V L++ G
Sbjct: 77 HRDRVKELLIKMG 89
>sp|A4YIU6|SUI1_METS5 Protein translation factor SUI1 homolog OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2210 PE=3 SV=1
Length = 99
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 30 YVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 89
++ I++++R K +T ++GL + KI +LK + GTV I++QGD
Sbjct: 23 FIKIKLEKRRYGKEVTVIEGLGDDADLKKIASELKSKLAAGGTVKNGR-----IEIQGDH 77
Query: 90 RKNVSTFLVQAG 101
R+ LV+ G
Sbjct: 78 RERARDLLVKLG 89
>sp|A1C8E3|DENR_ASPCL Translation machinery-associated protein 22 OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=tma22 PE=3 SV=1
Length = 194
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 31 VHIRVQQRNGRKSLTTVQGLKKEFSYNK-ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 89
V I+ +RN RK +T + GL+ NK + K+L K+F +V + P + I +QGD
Sbjct: 102 VQIKRVERNKRKHVTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDV 161
Query: 90 RKNVSTFLVQ 99
++V +L++
Sbjct: 162 SEDVQEWLLE 171
>sp|Q975S0|SUI1_SULTO Protein translation factor SUI1 homolog OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_03500 PE=3 SV=1
Length = 100
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 30 YVHIRVQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGD 88
++ I+V++R K +T ++GL + KI +LK + GTV I+LQGD
Sbjct: 23 FIKIKVEKRRYGKEVTIIEGLSGSDVELKKIASELKSKLAAGGTVKNGK-----IELQGD 77
Query: 89 QRKNVSTFLVQAGIVKKEFIKIH 111
R+ V L++ G + I I
Sbjct: 78 HRERVKELLMKMGYPESNIIIIE 100
>sp|Q8U006|SUI1_PYRFU Protein translation factor SUI1 homolog OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1817 PE=3 SV=1
Length = 98
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 8 IPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGR--KSLTTVQGL-KKEFSYNKILKDLK 64
+P +P E ++ K+ IRV R K T ++G+ +KEF +I K LK
Sbjct: 1 MPRIVNPLDEMLFKEV---LKEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLK 57
Query: 65 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 101
+ C GT I+LQGD R + LV+ G
Sbjct: 58 AKLACGGTAKNGR-----IELQGDHRDRIKKLLVELG 89
>sp|Q6L1B9|SUI1_PICTO Protein translation factor SUI1 homolog OS=Picrophilus torridus
(strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC
100828) GN=PTO0648 PE=3 SV=1
Length = 99
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 6 TQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFS-YNKILKDLK 64
T IP P+ + + + V I V +R K +T ++G+ + N+I K LK
Sbjct: 7 TGIPKELQPWEGFDRNN------EVVKISVDKRRYGKVVTLIEGIDPKVEDINEIAKSLK 60
Query: 65 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 101
K+ GTV G++I+LQGD R+ L G
Sbjct: 61 KKVASGGTVKD----GKIIELQGDHRETARAQLESMG 93
>sp|Q55397|Y546_SYNY3 Uncharacterized protein sll0546 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll0546 PE=3 SV=1
Length = 111
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 12 FDPFAEANAEDSGAGSKDYVHIRVQQ-RNGRK--SLTTVQGLKKEFSYNKILKDLKKEFC 68
F P A+ +E+ ++R+Q R+GRK ++T V GL+ + L K FC
Sbjct: 15 FGPVADPLSEEQIDLPPQQQNVRIQATRSGRKGKTVTVVSGLQLSAMGQQALLKALKSFC 74
Query: 69 CNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 101
+G +++ +++QGDQR+ + +L++ G
Sbjct: 75 GSGGTLKE----DCVEIQGDQREKILAYLLKQG 103
>sp|A6SIZ0|DENR_BOTFB Translation machinery-associated protein 22 OS=Botryotinia
fuckeliana (strain B05.10) GN=tma22 PE=3 SV=1
Length = 197
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 31 VHIRVQQRNGRKSLTTVQGLKK-EFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 89
+ I+ +RN RK +T VQGL+ K+ K+ F +V + GQ I +QGD
Sbjct: 103 IRIKRVERNKRKYVTEVQGLEAFGLELKKVAKEFGSRFATGSSVTKVASGGQEITVQGDV 162
Query: 90 RKNVSTFLVQ 99
+V FL++
Sbjct: 163 SDDVREFLIK 172
>sp|A4QVI3|DENR_MAGO7 Translation machinery-associated protein 22 OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=TMA22 PE=3
SV=2
Length = 201
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 28 KDYVHIRVQQRNGRKSLTTVQGLKK-EFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQ 86
K V ++ +RN RK +T+V GL+ K+ KD K+F +V + G+ I +Q
Sbjct: 101 KSVVTVKRIERNKRKYVTSVSGLESFGLELKKVAKDFGKKFATGSSVTKVASGGEEIVVQ 160
Query: 87 GDQRKNVSTFLVQ 99
GD + F+V+
Sbjct: 161 GDVSDEIKEFIVE 173
>sp|Q9YBG9|SUI1_AERPE Protein translation factor SUI1 homolog OS=Aeropyrum pernix (strain
ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=APE_1629 PE=3 SV=1
Length = 101
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 31 VHIRVQQRNGRKSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 89
+ IR+++R + +T ++G+ +KEF+ K+ LK GT I+LQGD
Sbjct: 25 IKIRLEKRRFGREVTIIEGINEKEFNLKKLASTLKSRLATGGTAKNGR-----IELQGDH 79
Query: 90 RKNVSTFLVQAG 101
R V LV+ G
Sbjct: 80 RHRVKKILVELG 91
>sp|B6YSM1|SUI1_THEON Protein translation factor SUI1 homolog OS=Thermococcus onnurineus
(strain NA1) GN=TON_0074 PE=3 SV=1
Length = 98
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 8 IPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGR--KSLTTVQGL-KKEFSYNKILKDLK 64
+P +P E ++ K+ IRV R K T ++G+ +KEF I K LK
Sbjct: 1 MPRIVNPLDEMLFKEV---LKEQQRIRVYIEKARYGKLKTIIEGIDEKEFDLEDIAKKLK 57
Query: 65 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 101
+ C GTV + I+LQGD R+ V L G
Sbjct: 58 AKLACGGTVKKGR-----IELQGDHREKVKKLLADLG 89
>sp|Q3IU96|SUI1_NATPD Protein translation factor SUI1 homolog OS=Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678) GN=NP_0388A PE=3 SV=1
Length = 97
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 31 VHIRVQQRNGRKSLTTVQGLK-KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQ 89
++IR+ +R K +T ++G ++ + + DLK +F C GTV E G I+LQG+
Sbjct: 27 INIRIDERRYGKEVTVIEGFDPQDVDLDSLSSDLKSKFACGGTV----EDGS-IELQGNH 81
Query: 90 RKNVSTFLVQAG 101
V FL + G
Sbjct: 82 LGRVEDFLREKG 93
>sp|C5A278|SUI1_THEGJ Protein translation factor SUI1 homolog OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1995 PE=3 SV=1
Length = 98
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 8 IPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGR--KSLTTVQGL-KKEFSYNKILKDLK 64
+P +P E ++ K+ IRV R K T ++G+ +KEF I K LK
Sbjct: 1 MPRIVNPLDEMLFKEV---LKEQQRIRVYIERARYGKLKTIIEGIDEKEFDLEDIAKKLK 57
Query: 65 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 101
+ C GTV + I+LQGD R + L G
Sbjct: 58 AKLACGGTVKKGR-----IELQGDHRDRIKKLLADLG 89
>sp|Q9V1U3|SUI1_PYRAB Protein translation factor SUI1 homolog OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB03340 PE=3 SV=2
Length = 98
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 8 IPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGR--KSLTTVQGL-KKEFSYNKILKDLK 64
+P +P E ++ K+ IRV R K T ++G+ +KEF +I K LK
Sbjct: 1 MPRIVNPLDEMLFKEV---LKEQQRIRVYTERARYGKIKTIIEGIDEKEFDLEEIAKKLK 57
Query: 65 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 101
+ C GT I+LQGD R + L + G
Sbjct: 58 AKLACGGTAKNGR-----IELQGDHRDRIKKLLAELG 89
>sp|A2BIX0|SUI1_HYPBU Protein translation factor SUI1 homolog OS=Hyperthermus butylicus
(strain DSM 5456 / JCM 9403) GN=Hbut_0053 PE=3 SV=1
Length = 103
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 25 AGSKDYVHIRVQQRNGRKSLTTVQGL-KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVI 83
A + + I++++R + +T ++GL ++E + K+ +LK GT I
Sbjct: 21 AREQQIIKIKLEKRRYGREVTIIEGLDEREVNLKKLASELKSRLATGGTYKNGR-----I 75
Query: 84 QLQGDQRKNVSTFLVQAGIVKKEFI 108
+LQGD R V LV+ G ++ I
Sbjct: 76 ELQGDHRHRVKEILVEMGFPEENII 100
>sp|Q5JDH7|SUI1_PYRKO Protein translation factor SUI1 homolog OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=TK1534 PE=3
SV=1
Length = 98
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Query: 8 IPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGR--KSLTTVQGL-KKEFSYNKILKDLK 64
+P +P E ++ K+ IRV R K T ++G+ +KEF I K LK
Sbjct: 1 MPRIVNPLDEMLFKEV---LKEQQRIRVYVERARYGKLKTIIEGIDEKEFDLEDIAKKLK 57
Query: 65 KEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAG 101
+ C GT I+LQGD R V L + G
Sbjct: 58 AKLACGGTAKNGR-----IELQGDHRDRVKKLLAELG 89
>sp|P14021|SUI1_METVA Protein translation factor SUI1 homolog OS=Methanococcus vannielii
PE=3 SV=1
Length = 102
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 31 VHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFC-CNGTVVQDPELGQVIQLQGDQ 89
+ + V +R K +T V G + K L K+ C C GTV +D I+LQGD
Sbjct: 27 IKVYVTKRRFGKLMTVVDGFDADLIDVKDLAKKLKDICACGGTVKKDS-----IELQGDH 81
Query: 90 RKNVSTFLVQAGIVK 104
RK L++ G K
Sbjct: 82 RKKAEEILIKMGFSK 96
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,702,796
Number of Sequences: 539616
Number of extensions: 1540882
Number of successful extensions: 3523
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 3460
Number of HSP's gapped (non-prelim): 83
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)