Query 039814
Match_columns 454
No_of_seqs 326 out of 1920
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 13:26:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039814.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039814hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 1.5E-40 3.2E-45 338.2 35.2 294 144-438 46-350 (350)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 4.8E-39 1E-43 320.7 33.2 296 147-442 2-299 (302)
3 KOG1441 Glucose-6-phosphate/ph 100.0 2.6E-40 5.5E-45 326.8 13.3 295 144-443 14-314 (316)
4 PLN00411 nodulin MtN21 family 100.0 1.7E-27 3.6E-32 242.4 32.5 293 145-446 11-338 (358)
5 PRK11272 putative DMT superfam 99.9 5.2E-24 1.1E-28 211.6 35.0 269 156-439 17-288 (292)
6 KOG1444 Nucleotide-sugar trans 99.9 6.7E-25 1.5E-29 213.1 24.8 290 153-445 18-309 (314)
7 PF08449 UAA: UAA transporter 99.9 4.5E-24 9.7E-29 213.2 31.2 284 153-441 6-302 (303)
8 KOG1443 Predicted integral mem 99.9 3.8E-25 8.1E-30 212.1 22.3 296 141-438 10-317 (349)
9 PRK11689 aromatic amino acid e 99.9 8.8E-24 1.9E-28 210.3 32.3 256 162-438 19-289 (295)
10 PRK11453 O-acetylserine/cystei 99.9 3.1E-23 6.6E-28 206.8 32.9 265 163-439 20-290 (299)
11 TIGR00950 2A78 Carboxylate/Ami 99.9 1.8E-23 3.8E-28 203.3 29.1 254 162-431 4-259 (260)
12 PRK15430 putative chlorampheni 99.9 4.9E-22 1.1E-26 197.9 31.5 258 163-437 24-286 (296)
13 PRK10532 threonine and homoser 99.9 2E-21 4.4E-26 193.2 33.8 254 164-440 29-285 (293)
14 PF06027 DUF914: Eukaryotic pr 99.9 9.5E-22 2.1E-26 197.0 28.0 269 163-440 29-309 (334)
15 TIGR03340 phn_DUF6 phosphonate 99.9 7.7E-20 1.7E-24 180.7 27.1 258 161-433 15-280 (281)
16 COG0697 RhaT Permeases of the 99.8 1.5E-17 3.2E-22 162.8 34.0 267 157-437 17-288 (292)
17 KOG1442 GDP-fucose transporter 99.8 9.2E-21 2E-25 179.3 7.6 302 147-453 28-344 (347)
18 KOG1581 UDP-galactose transpor 99.8 1.5E-17 3.2E-22 160.2 27.4 292 142-440 9-317 (327)
19 TIGR00688 rarD rarD protein. T 99.8 3.6E-17 7.7E-22 159.3 27.9 228 162-411 17-255 (256)
20 COG5070 VRG4 Nucleotide-sugar 99.8 1.1E-17 2.3E-22 154.3 17.3 281 154-443 13-303 (309)
21 KOG1580 UDP-galactose transpor 99.8 5.8E-18 1.3E-22 157.1 14.1 273 157-437 23-314 (337)
22 KOG3912 Predicted integral mem 99.7 9.4E-16 2E-20 145.9 21.9 280 157-437 13-335 (372)
23 COG5006 rhtA Threonine/homoser 99.7 7.5E-15 1.6E-19 138.2 27.4 251 165-437 30-283 (292)
24 TIGR00776 RhaT RhaT L-rhamnose 99.7 1.4E-14 3E-19 144.0 29.8 249 164-437 18-289 (290)
25 PF03151 TPT: Triose-phosphate 99.7 3.9E-16 8.6E-21 139.7 16.8 146 291-436 1-153 (153)
26 KOG2765 Predicted membrane pro 99.6 2.9E-15 6.4E-20 147.9 14.8 228 208-440 157-394 (416)
27 KOG1582 UDP-galactose transpor 99.6 8E-15 1.7E-19 139.0 16.7 286 145-438 41-334 (367)
28 PF04142 Nuc_sug_transp: Nucle 99.6 1.3E-13 2.9E-18 133.4 22.3 211 210-427 17-244 (244)
29 COG2962 RarD Predicted permeas 99.5 1.8E-11 3.9E-16 118.3 29.8 264 155-440 15-287 (293)
30 KOG4510 Permease of the drug/m 99.5 1.9E-15 4.2E-20 143.0 1.1 264 156-439 47-328 (346)
31 KOG2234 Predicted UDP-galactos 99.5 2.2E-11 4.7E-16 120.8 28.1 224 211-441 93-327 (345)
32 KOG1583 UDP-N-acetylglucosamin 99.5 1.7E-13 3.7E-18 130.5 9.9 269 164-442 20-320 (330)
33 PF00892 EamA: EamA-like trans 99.2 1.7E-10 3.8E-15 98.5 9.6 119 161-280 5-124 (126)
34 TIGR00803 nst UDP-galactose tr 99.1 6.6E-10 1.4E-14 106.0 12.1 194 234-434 2-222 (222)
35 KOG2766 Predicted membrane pro 99.0 7.5E-11 1.6E-15 111.4 2.5 258 164-438 35-301 (336)
36 COG2510 Predicted membrane pro 98.9 2.8E-08 6E-13 84.9 11.0 119 162-281 18-138 (140)
37 PF00892 EamA: EamA-like trans 98.9 2E-08 4.2E-13 85.7 10.2 124 300-435 1-125 (126)
38 PF06800 Sugar_transport: Suga 98.8 5.3E-07 1.2E-11 87.8 21.1 209 208-433 43-268 (269)
39 PF13536 EmrE: Multidrug resis 98.8 1.3E-08 2.8E-13 86.9 8.3 76 210-286 34-110 (113)
40 COG2510 Predicted membrane pro 98.8 2E-08 4.4E-13 85.8 8.3 135 291-435 4-138 (140)
41 KOG4314 Predicted carbohydrate 98.8 4.3E-08 9.4E-13 89.7 10.9 219 210-437 53-277 (290)
42 PRK15430 putative chlorampheni 98.6 2.7E-06 5.8E-11 84.8 19.3 141 286-435 4-144 (296)
43 TIGR00950 2A78 Carboxylate/Ami 98.6 2.9E-06 6.2E-11 82.3 16.7 117 161-278 142-260 (260)
44 TIGR00688 rarD rarD protein. T 98.5 6.2E-06 1.3E-10 80.2 18.1 141 290-436 2-142 (256)
45 TIGR03340 phn_DUF6 phosphonate 98.5 2.7E-06 5.8E-11 84.1 15.0 133 292-436 3-135 (281)
46 PLN00411 nodulin MtN21 family 98.3 1.8E-05 4E-10 81.0 16.4 137 291-437 14-157 (358)
47 PRK10532 threonine and homoser 98.3 1.8E-05 3.9E-10 78.7 16.0 125 151-281 155-280 (293)
48 PRK02971 4-amino-4-deoxy-L-ara 98.2 3.6E-05 7.9E-10 67.3 14.0 122 290-439 2-125 (129)
49 PRK11689 aromatic amino acid e 98.2 2.8E-05 6.2E-10 77.4 14.4 118 161-282 170-287 (295)
50 PRK15051 4-amino-4-deoxy-L-ara 98.2 2.9E-05 6.2E-10 66.2 12.1 63 219-281 46-108 (111)
51 PRK11272 putative DMT superfam 98.2 4.5E-05 9.7E-10 75.9 14.5 118 163-282 166-285 (292)
52 PF05653 Mg_trans_NIPA: Magnes 98.0 0.0001 2.3E-09 73.7 14.0 63 219-281 59-121 (300)
53 PRK11453 O-acetylserine/cystei 98.0 0.00025 5.4E-09 70.8 15.7 122 161-282 157-287 (299)
54 TIGR00817 tpt Tpt phosphate/ph 97.9 0.00013 2.9E-09 72.7 12.1 124 157-281 155-292 (302)
55 PF03151 TPT: Triose-phosphate 97.8 0.0011 2.3E-08 59.0 15.6 125 156-280 9-151 (153)
56 PF13536 EmrE: Multidrug resis 97.7 0.0023 5.1E-08 54.3 14.8 62 377-439 48-109 (113)
57 PRK13499 rhamnose-proton sympo 97.6 0.027 6E-07 57.2 24.5 230 206-437 69-342 (345)
58 PTZ00343 triose or hexose phos 97.6 0.0019 4E-08 66.1 16.2 121 303-435 62-185 (350)
59 COG0697 RhaT Permeases of the 97.6 0.002 4.3E-08 62.7 15.5 118 161-282 168-287 (292)
60 TIGR00776 RhaT RhaT L-rhamnose 97.6 0.00094 2E-08 66.5 12.5 125 146-281 154-287 (290)
61 COG2962 RarD Predicted permeas 97.5 0.0042 9.1E-08 60.8 16.2 140 289-437 6-145 (293)
62 PRK15051 4-amino-4-deoxy-L-ara 97.5 0.0015 3.2E-08 55.6 10.7 55 382-436 55-109 (111)
63 PRK02971 4-amino-4-deoxy-L-ara 97.3 0.00096 2.1E-08 58.4 8.2 70 214-283 51-123 (129)
64 COG5006 rhtA Threonine/homoser 97.3 0.0058 1.3E-07 58.7 13.1 123 154-278 155-278 (292)
65 PF08449 UAA: UAA transporter 97.2 0.0055 1.2E-07 61.3 13.6 72 371-442 71-142 (303)
66 PRK10452 multidrug efflux syst 97.0 0.0066 1.4E-07 52.4 9.9 69 214-282 34-103 (120)
67 PF04142 Nuc_sug_transp: Nucle 97.0 0.0038 8.2E-08 60.7 9.1 75 367-441 20-94 (244)
68 KOG2922 Uncharacterized conser 96.9 0.0058 1.3E-07 60.6 9.4 64 219-282 73-136 (335)
69 PRK09541 emrE multidrug efflux 96.8 0.014 3E-07 49.6 9.8 68 215-282 35-103 (110)
70 COG4975 GlcU Putative glucose 96.8 0.00057 1.2E-08 65.2 1.5 219 203-438 52-287 (288)
71 PRK11431 multidrug efflux syst 96.7 0.021 4.5E-07 48.1 10.4 68 214-281 33-101 (105)
72 PRK10650 multidrug efflux syst 96.7 0.03 6.4E-07 47.5 11.2 68 213-280 38-106 (109)
73 PF06027 DUF914: Eukaryotic pr 96.6 0.052 1.1E-06 55.1 14.3 68 371-438 86-153 (334)
74 PRK10452 multidrug efflux syst 96.5 0.035 7.6E-07 47.9 10.7 55 384-438 50-105 (120)
75 COG2076 EmrE Membrane transpor 96.4 0.024 5.2E-07 47.6 8.8 68 214-281 34-102 (106)
76 PRK09541 emrE multidrug efflux 96.4 0.046 1E-06 46.4 10.4 55 384-438 50-105 (110)
77 PRK13499 rhamnose-proton sympo 96.3 0.17 3.7E-06 51.6 16.2 140 289-437 6-154 (345)
78 PF04657 DUF606: Protein of un 96.3 0.12 2.7E-06 45.6 13.0 117 162-279 16-138 (138)
79 COG2076 EmrE Membrane transpor 96.2 0.12 2.5E-06 43.5 11.6 54 384-437 50-104 (106)
80 PRK11431 multidrug efflux syst 95.9 0.1 2.2E-06 44.0 10.2 53 384-436 49-102 (105)
81 PF00893 Multi_Drug_Res: Small 95.9 0.072 1.6E-06 43.7 9.1 56 218-273 37-93 (93)
82 PRK10650 multidrug efflux syst 95.8 0.11 2.4E-06 44.1 10.0 52 384-435 55-107 (109)
83 KOG2234 Predicted UDP-galactos 95.7 0.56 1.2E-05 47.4 16.4 70 367-436 95-164 (345)
84 PF10639 UPF0546: Uncharacteri 95.5 0.042 9.2E-07 46.8 6.4 70 210-280 42-112 (113)
85 PF06800 Sugar_transport: Suga 95.4 0.23 5E-06 48.8 12.0 72 207-279 193-268 (269)
86 PF07857 DUF1632: CEO family ( 95.0 0.078 1.7E-06 51.7 7.4 132 291-441 1-139 (254)
87 KOG4510 Permease of the drug/m 95.0 0.0059 1.3E-07 59.0 -0.4 67 372-438 105-171 (346)
88 PF04657 DUF606: Protein of un 94.7 0.94 2E-05 40.0 13.0 131 292-433 3-138 (138)
89 TIGR00803 nst UDP-galactose tr 94.6 0.35 7.5E-06 45.9 10.7 66 214-279 156-221 (222)
90 PF05653 Mg_trans_NIPA: Magnes 93.7 0.45 9.7E-06 47.7 9.8 117 288-435 5-121 (300)
91 PF00893 Multi_Drug_Res: Small 93.2 0.4 8.7E-06 39.3 7.2 44 384-427 49-93 (93)
92 COG3238 Uncharacterized protei 92.3 2.8 6.1E-05 37.5 11.7 118 162-280 20-144 (150)
93 COG3238 Uncharacterized protei 92.0 4 8.8E-05 36.5 12.3 140 289-438 4-148 (150)
94 KOG1441 Glucose-6-phosphate/ph 89.6 0.94 2E-05 45.7 6.8 129 151-281 167-306 (316)
95 KOG2765 Predicted membrane pro 88.9 0.54 1.2E-05 47.9 4.5 66 376-441 171-236 (416)
96 KOG1581 UDP-galactose transpor 87.8 6.1 0.00013 39.4 10.9 74 206-279 237-310 (327)
97 PF06379 RhaT: L-rhamnose-prot 84.2 44 0.00096 34.0 15.1 138 289-439 6-156 (344)
98 KOG4314 Predicted carbohydrate 83.2 1.6 3.5E-05 40.7 4.2 60 378-437 67-126 (290)
99 PF10639 UPF0546: Uncharacteri 81.3 2.4 5.2E-05 36.2 4.3 39 395-433 73-111 (113)
100 KOG1580 UDP-galactose transpor 80.2 2.4 5.3E-05 40.7 4.3 71 209-279 240-310 (337)
101 COG5070 VRG4 Nucleotide-sugar 77.3 29 0.00062 33.3 10.4 118 159-277 167-291 (309)
102 PF04342 DUF486: Protein of un 72.8 52 0.0011 27.7 9.6 52 229-280 54-106 (108)
103 KOG3912 Predicted integral mem 69.1 13 0.00028 36.8 6.2 52 385-436 107-158 (372)
104 COG3169 Uncharacterized protei 68.5 68 0.0015 26.6 10.1 32 249-280 82-113 (116)
105 KOG1442 GDP-fucose transporter 61.7 15 0.00032 36.3 5.1 132 148-279 185-324 (347)
106 PF04342 DUF486: Protein of un 61.7 10 0.00022 31.9 3.4 29 405-433 77-105 (108)
107 PRK02237 hypothetical protein; 60.3 22 0.00047 30.0 5.1 46 392-437 61-106 (109)
108 KOG4831 Unnamed protein [Funct 56.7 17 0.00036 30.6 3.9 71 210-281 53-124 (125)
109 COG3169 Uncharacterized protei 56.1 1.2E+02 0.0026 25.3 10.6 49 386-434 59-113 (116)
110 PF02694 UPF0060: Uncharacteri 55.5 23 0.0005 29.8 4.5 45 393-437 60-104 (107)
111 KOG1444 Nucleotide-sugar trans 52.4 2.6E+02 0.0057 28.2 12.5 56 380-435 93-148 (314)
112 PF08627 CRT-like: CRT-like; 48.5 1E+02 0.0023 26.8 7.5 43 141-183 51-94 (130)
113 PF02694 UPF0060: Uncharacteri 47.2 1.3E+02 0.0029 25.3 7.8 40 244-283 65-104 (107)
114 COG1742 Uncharacterized conser 46.5 1.8E+02 0.0039 24.5 8.6 39 245-283 67-105 (109)
115 KOG2922 Uncharacterized conser 44.9 16 0.00035 36.8 2.4 40 396-435 96-135 (335)
116 COG4975 GlcU Putative glucose 44.5 13 0.00028 36.1 1.6 75 205-280 205-283 (288)
117 PF06379 RhaT: L-rhamnose-prot 43.7 3.8E+02 0.0082 27.5 21.2 103 208-310 71-193 (344)
118 PF11139 DUF2910: Protein of u 42.6 1.5E+02 0.0032 27.9 8.6 39 242-280 158-209 (214)
119 PRK02237 hypothetical protein; 41.2 2.2E+02 0.0048 24.1 10.6 39 244-282 67-105 (109)
120 KOG1582 UDP-galactose transpor 40.7 1E+02 0.0023 30.5 7.1 75 211-285 261-335 (367)
121 PF00909 Ammonium_transp: Ammo 34.4 5.5E+02 0.012 26.7 18.3 47 289-335 275-322 (399)
122 PF07331 TctB: Tripartite tric 27.6 3.9E+02 0.0084 22.8 10.4 40 175-214 37-76 (141)
123 PF05297 Herpes_LMP1: Herpesvi 26.0 22 0.00049 35.1 0.0 51 232-282 45-97 (381)
124 PF09852 DUF2079: Predicted me 23.7 5.8E+02 0.013 26.9 10.2 120 173-306 56-187 (449)
125 PF06210 DUF1003: Protein of u 22.3 2.2E+02 0.0049 24.0 5.4 10 151-160 13-22 (108)
126 KOG1443 Predicted integral mem 22.2 8.4E+02 0.018 24.8 11.1 35 246-280 279-313 (349)
127 cd01324 cbb3_Oxidase_CcoQ Cyto 20.0 89 0.0019 22.3 2.1 21 424-444 19-39 (48)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=1.5e-40 Score=338.17 Aligned_cols=294 Identities=39% Similarity=0.683 Sum_probs=253.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCC--CHHHHHHHHHHHHHHH
Q 039814 144 QRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKT--DLEFWKSLFPVAVAHT 221 (454)
Q Consensus 144 ~~~~l~~~~~lw~~~s~~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~--~~~~~~~ll~~gll~~ 221 (454)
.++++..+|++||++|+..+++||++++++|+|++++.+|++++.+++.+.|..+.++.|+. .+.+++.++++|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999887766665544443433 3457899999999998
Q ss_pred HHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCcchHHHHHHHHHHHHH
Q 039814 222 IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLA 301 (454)
Q Consensus 222 l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~~~~~G~ll~lls~l~ 301 (454)
..+...+.|++++++++++++++++|+|+++++++++|||++++++++++++++|+.+++.+|.++++.|++++++|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 77888889999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred HHHHHHHHHhccCCC-----CCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHH---HHHh-hchHHHHHHHHHHH
Q 039814 302 FVFRNIFSKKGMKGK-----SVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQK---AIAQ-IGPNFVWWVAAQSI 372 (454)
Q Consensus 302 ~A~~~Vl~kk~~~~~-----~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~---~~~~-~~~~~l~~ll~~~l 372 (454)
|++|+++.||.++++ +.++.+.+.++..++.++++|+....|++.. ...|.. .... ....+++.++.+++
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~s~l 284 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKW-VPVWTNYTANMTNYTKGIIIFKIFFSGV 284 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHHHhhhcccccchHHHHHHHHHHHH
Confidence 999999999987654 3567778888888899999998877776432 112211 0011 11234456778899
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhh
Q 039814 373 FYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFL 438 (454)
Q Consensus 373 ~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k 438 (454)
.++++|...|+++++++|+++++.+++||++++++|++++||++++.+++|+++++.|+++|++.|
T Consensus 285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999764
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=4.8e-39 Score=320.67 Aligned_cols=296 Identities=49% Similarity=0.825 Sum_probs=247.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 039814 147 KIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVA 226 (454)
Q Consensus 147 ~l~~~~~lw~~~s~~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~ 226 (454)
++..++++||.+|++++++||++++++++|+.++++|++++.+++.+.+..+.++.++.++++|+.+++.|++++.++.+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999998877666554433344556678899999999999899999
Q ss_pred HHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCcchHHHHHHHHHHHHHHHHHH
Q 039814 227 ATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRN 306 (454)
Q Consensus 227 ~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~~~~~G~ll~lls~l~~A~~~ 306 (454)
.++|++|+++++++++++++|+++++++++++|||++++++++++++++|+++....+.+++..|++++++|+++|++|+
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988777777788889999999999999999
Q ss_pred HHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchH-HHHHHHHHH-HHHHHHHHHHHHH
Q 039814 307 IFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPN-FVWWVAAQS-IFYHLYNQVSYMS 384 (454)
Q Consensus 307 Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~-~l~~ll~~~-l~~~l~n~~~f~~ 384 (454)
++.||.+++++.++.....++...+.+.+.|+....|++.....++.......... .+...+..+ .+++++|...|.+
T Consensus 162 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (302)
T TIGR00817 162 IFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFML 241 (302)
T ss_pred HHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999877445778888888888888889998876676443332232211111111 222222333 3566677788889
Q ss_pred hhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhcccc
Q 039814 385 LDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQDL 442 (454)
Q Consensus 385 l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~~~ 442 (454)
++++||+++++.++++|++++++|++++||++++.+++|++++++|+++|++.|.+++
T Consensus 242 l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~ 299 (302)
T TIGR00817 242 LGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP 299 (302)
T ss_pred HccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999999999999999999999999999999999999998765433
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-40 Score=326.75 Aligned_cols=295 Identities=42% Similarity=0.656 Sum_probs=262.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCC-CHHHHHHHHHHHHHH
Q 039814 144 QRLKIGIYFATWWALNVVFNIYNKKVLN--AFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKT-DLEFWKSLFPVAVAH 220 (454)
Q Consensus 144 ~~~~l~~~~~lw~~~s~~~~i~nK~ll~--~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~-~~~~~~~ll~~gll~ 220 (454)
+....+.++..||.+|++.+++||++++ +||+|++++.++++++.+.+.+.+..+..+.++. ++..++.++++|+++
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~ 93 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF 93 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence 4667888899999999999999999999 8999999999999999999888888776665543 456789999999999
Q ss_pred HHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCcchHHHHHHHHHHHH
Q 039814 221 TIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNL 300 (454)
Q Consensus 221 ~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~~~~~G~ll~lls~l 300 (454)
++++++.|.++++++++++|++|+++|++++++++++.+|++++..++++++++.||++++.+|.++|+.|++.++++++
T Consensus 94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~ 173 (316)
T KOG1441|consen 94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL 173 (316)
T ss_pred HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcc--CCCCCchHHHHHHHHHHHHHHHH-HHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHH
Q 039814 301 AFVFRNIFSKKGM--KGKSVGGMNYYACLSMMSLLILT-PFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLY 377 (454)
Q Consensus 301 ~~A~~~Vl~kk~~--~~~~~~~l~~~~~~~~~~~lll~-P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~ 377 (454)
.++++++++|+.+ +++++++++++.+++.++..+++ |+....|++.. . .+.. ..+....+.+++ .+++++++
T Consensus 174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~--~~~~~~~~~~~~-~sv~~f~~ 248 (316)
T KOG1441|consen 174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLT--APWFVTFLILLL-NSVLAFLL 248 (316)
T ss_pred HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeec--cccchhhHHHHH-HHHHHHHH
Confidence 9999999999998 46789999999999999998888 98888777654 1 1111 011112333333 44999999
Q ss_pred HHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhccccc
Q 039814 378 NQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQDLG 443 (454)
Q Consensus 378 n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~~~~ 443 (454)
|+..|++++++||+|+++.+.+|++++++.|+++|+|++|+.|.+|++++++|+++|++.|.++++
T Consensus 249 Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 249 NLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999887654
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.96 E-value=1.7e-27 Score=242.39 Aligned_cols=293 Identities=12% Similarity=0.102 Sum_probs=213.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH-HHhhh-cCCCCCCHHHHHHHHHHHHHHHH
Q 039814 145 RLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVS-WATRI-AEAPKTDLEFWKSLFPVAVAHTI 222 (454)
Q Consensus 145 ~~~l~~~~~lw~~~s~~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~-~~~~~-~~~~~~~~~~~~~ll~~gll~~l 222 (454)
..+....+++....+.++.++.|.+++.--.|+.+.++|+.++.+++++. +.+++ ++.++.+++.|..++..|+++++
T Consensus 11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~ 90 (358)
T PLN00411 11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSM 90 (358)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHH
Confidence 33444456667788888999999999875448889999999987776543 33332 23344446667778888887766
Q ss_pred HHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHH------hcccCChhhHHHHHhHhhhheeeeec-CC----------
Q 039814 223 GHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFL------FGETLPMPVYMSLLPIIGGCALAAVT-EL---------- 285 (454)
Q Consensus 223 ~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~------l~er~s~~~~lsl~li~~Gv~l~~~~-~~---------- 285 (454)
...+.++|++|++++.++++.++.|++++++++++ ++||+++++++|++++++|+.++... +.
T Consensus 91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~ 170 (358)
T PLN00411 91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY 170 (358)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence 66688999999999999999999999999999999 69999999999999999999875531 11
Q ss_pred -------------cch-HHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchH--HHH
Q 039814 286 -------------NFN-MIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQ--MWA 349 (454)
Q Consensus 286 -------------~~~-~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~--~~~ 349 (454)
..+ ..|++++++|+++||+|++++||..++++ +......+.+.++.+.+.++....|... .|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~ 249 (358)
T PLN00411 171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWI 249 (358)
T ss_pred ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCCcccce
Confidence 112 45999999999999999999999866542 2223333444444444444444444321 111
Q ss_pred HhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHH
Q 039814 350 AGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAIL 429 (454)
Q Consensus 350 ~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~ 429 (454)
..|+... ..+++..+..++. ...+++++++++|.+++++.+++|++++++|++++||++++.+++|++++++
T Consensus 250 ~~~~~~~----~~i~y~~i~t~la----y~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~ 321 (358)
T PLN00411 250 IHFDITL----ITIVTMAIITSVY----YVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITL 321 (358)
T ss_pred eccchHH----HHHHHHHHHHHHH----HHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 1111110 0122222222222 2345678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccccccc
Q 039814 430 GTFIYSQFLVQDLGIYV 446 (454)
Q Consensus 430 Gv~ly~~~k~~~~~~~~ 446 (454)
|+++.++.+++|.+++.
T Consensus 322 Gv~l~~~~~~~~~~~~~ 338 (358)
T PLN00411 322 GFYAVMWGKANEEKDQL 338 (358)
T ss_pred HHHHHHhhhhhhhhhcc
Confidence 99999988776655443
No 5
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.94 E-value=5.2e-24 Score=211.60 Aligned_cols=269 Identities=13% Similarity=0.136 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHh-cc
Q 039814 156 WALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAH-TIGHVAATVSM-SK 233 (454)
Q Consensus 156 ~~~s~~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~-~l~~~~~~~al-~~ 233 (454)
...+....+..|..+++.+ |..++++|++++.+++++....++++. .++++++.....|.+. ..+..+.+++. ++
T Consensus 17 ~~iWg~~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 93 (292)
T PRK11272 17 YIIWGSTYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHPL--PTLRQWLNAALIGLLLLAVGNGMVTVAEHQN 93 (292)
T ss_pred HHHHhhHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3444445578899999888 999999999998777654433332222 2345577777777765 56677778888 99
Q ss_pred cchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeec-CCcchHHHHHHHHHHHHHHHHHHHHHHhc
Q 039814 234 VAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVT-ELNFNMIGFMGAMISNLAFVFRNIFSKKG 312 (454)
Q Consensus 234 vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~-~~~~~~~G~ll~lls~l~~A~~~Vl~kk~ 312 (454)
++++.++++.++.|+++++++++ +|||++++++++++++++|+.++..+ +.+.+..|++++++++++||.++++.||.
T Consensus 94 ~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~ 172 (292)
T PRK11272 94 VPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRL 172 (292)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999986 69999999999999999999877543 34456789999999999999999999986
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHH
Q 039814 313 MKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLT 392 (454)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t 392 (454)
.+++ +.....+...++.+++.|+....+.+.....+... ...+.+..+.+++.++. ..++++++.++.+
T Consensus 173 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~l~i~~s~~~~~---l~~~~~~~~~~~~ 241 (292)
T PRK11272 173 PLPV---GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSG-----FLALGYLAVFGSIIAIS---AYMYLLRNVRPAL 241 (292)
T ss_pred CCCc---chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHH-----HHHHHHHHHHHHHHHHH---HHHHHHhhcCHHH
Confidence 5332 23334455556666666665443322110001111 01122223333333332 3456789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhc
Q 039814 393 FSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLV 439 (454)
Q Consensus 393 ~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~ 439 (454)
.++..+++|++++++|++++||++++.+++|+++++.|+++.++.++
T Consensus 242 ~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 242 ATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999887554
No 6
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=6.7e-25 Score=213.11 Aligned_cols=290 Identities=17% Similarity=0.211 Sum_probs=235.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHHHH--HHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 039814 153 ATWWALNVVFNIYNKKVLNAFPYPWLTST--LSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVS 230 (454)
Q Consensus 153 ~lw~~~s~~~~i~nK~ll~~fp~P~~lt~--lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~a 230 (454)
+.|...++.+.+.||+++..++||..+.. .|.+++.+.+.+....|..+.++.+++..|+++|+++++.+..+....+
T Consensus 18 ~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~s 97 (314)
T KOG1444|consen 18 LFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKS 97 (314)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHcccc
Confidence 44557888889999999999999987777 8988888877777677777778888888999999999999999999999
Q ss_pred hcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 039814 231 MSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSK 310 (454)
Q Consensus 231 l~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~~~~~G~ll~lls~l~~A~~~Vl~k 310 (454)
++|+++++.+++|..+|+++++.+..++|.+++...|.++....+|......+|.++|..|+.|++..+++-+.+.++.|
T Consensus 98 lk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~k 177 (314)
T KOG1444|consen 98 LKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVK 177 (314)
T ss_pred ccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhch
Q 039814 311 KGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISP 390 (454)
Q Consensus 311 k~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp 390 (454)
+..+..+.....+..+-++.+++.+....++.+..+......+ ....+.++..+.++|++++..++..+++.+..|+
T Consensus 178 k~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~---~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SA 254 (314)
T KOG1444|consen 178 KSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFD---NWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSA 254 (314)
T ss_pred HhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcc---cccchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9876655555444445555555554444433332111110000 0112345567789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhccccccc
Q 039814 391 LTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQDLGIY 445 (454)
Q Consensus 391 ~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~~~~~~ 445 (454)
++.++++......+.+.+.+++|++.++.+++|..+-++|-.+|++.+.++++++
T Consensus 255 tT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 255 TTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP 309 (314)
T ss_pred cceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence 9999999444444444455555668999999999999999999999987766654
No 7
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.94 E-value=4.5e-24 Score=213.22 Aligned_cols=284 Identities=18% Similarity=0.289 Sum_probs=223.2
Q ss_pred HHHHHHHHHHHHHHHHHHhc-C--CchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 039814 153 ATWWALNVVFNIYNKKVLNA-F--PYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATV 229 (454)
Q Consensus 153 ~lw~~~s~~~~i~nK~ll~~-f--p~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~ 229 (454)
...|+......+..+.+... . ++|+++++.|++...+...+....... ++.++..++.+++.++++.++..+.+.
T Consensus 6 ~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (303)
T PF08449_consen 6 AGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF--PKSRKIPLKKYAILSFLFFLASVLSNA 83 (303)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc--cCCCcChHHHHHHHHHHHHHHHHHHHH
Confidence 34445555556677777663 2 369999999998887765443332221 112233467789999999999999999
Q ss_pred HhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCc----c------hHHHHHHHHHHH
Q 039814 230 SMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELN----F------NMIGFMGAMISN 299 (454)
Q Consensus 230 al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~----~------~~~G~ll~lls~ 299 (454)
|++|++.++..++|++.|+++++++++++|+|++++++++++++++|+++...+|.+ . ...|+++++++.
T Consensus 84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl 163 (303)
T PF08449_consen 84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSL 163 (303)
T ss_pred HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998876531 1 123999999999
Q ss_pred HHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 039814 300 LAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQ 379 (454)
Q Consensus 300 l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~ 379 (454)
++.+++.++++|.+++++.++...+.+..+++.++..+.....+..+ ....+.. ....+..+..++..+++++..+.
T Consensus 164 ~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~-~~~~~~f--~~~~p~~~~~l~~~s~~~~~g~~ 240 (303)
T PF08449_consen 164 LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGE-FRSAIRF--ISAHPSVLLYLLLFSLTGALGQF 240 (303)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhH-hhHHHHH--HHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998887778877777778888777766655422111 1111211 11223455566677777777777
Q ss_pred HHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhccc
Q 039814 380 VSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQD 441 (454)
Q Consensus 380 ~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~~ 441 (454)
..+.++++.||++.++..++++++++++|+++||+++++.+++|+++++.|+.+|++.|+++
T Consensus 241 ~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 241 FIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 77889999999999999999999999999999999999999999999999999999988765
No 8
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.94 E-value=3.8e-25 Score=212.10 Aligned_cols=296 Identities=19% Similarity=0.243 Sum_probs=235.1
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH--hhhcCC---CCCCHHHHHHHHH
Q 039814 141 EAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWA--TRIAEA---PKTDLEFWKSLFP 215 (454)
Q Consensus 141 ~~~~~~~l~~~~~lw~~~s~~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~--~~~~~~---~~~~~~~~~~ll~ 215 (454)
....++....++++||+++++...++|+.-.+|+||++++.+|+++-.++...... .+..+. +-..+++.+++.|
T Consensus 10 ~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aP 89 (349)
T KOG1443|consen 10 FLMNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAP 89 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhh
Confidence 34445555666799999999999999999999999999999998776655433221 111111 1223466788889
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCcchHHHHHHH
Q 039814 216 VAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGA 295 (454)
Q Consensus 216 ~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~~~~~G~ll~ 295 (454)
.|+..++...++|+++.|++++++++.|+..++|+.+++.+|.-|++++.-.+.++++.+|+.+.+..+.++|..|+.++
T Consensus 90 talata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv 169 (349)
T KOG1443|consen 90 TALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLV 169 (349)
T ss_pred hhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCC---CchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchH----HHHHHH
Q 039814 296 MISNLAFVFRNIFSKKGMKGKS---VGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPN----FVWWVA 368 (454)
Q Consensus 296 lls~l~~A~~~Vl~kk~~~~~~---~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~----~l~~ll 368 (454)
++|.++-+++..+.+.++++.+ -+|.......+....+.++|..+.+||+.... +...+...+.. ....+.
T Consensus 170 ~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~--~s~~f~~~d~~~~~rv~g~i~ 247 (349)
T KOG1443|consen 170 LAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLIT--SSSIFRFQDTGLILRVIGLIS 247 (349)
T ss_pred HHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccch--hhhHHHhcCccHHHHHHHHHH
Confidence 9999999999888877665433 12332222233333455677788889865421 11112222221 223356
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhh
Q 039814 369 AQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFL 438 (454)
Q Consensus 369 ~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k 438 (454)
..|..+++.-.+.|..+++++..+.++++..|.+.+.++|.++.+|.++..+++|..+.+.|+..|.+.+
T Consensus 248 l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~~ 317 (349)
T KOG1443|consen 248 LGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNEP 317 (349)
T ss_pred HHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccCc
Confidence 7888888888889999999999999999999999999999999999999999999999999999995543
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.94 E-value=8.8e-24 Score=210.31 Aligned_cols=256 Identities=11% Similarity=0.096 Sum_probs=180.0
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc----ccchh
Q 039814 162 FNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMS----KVAVS 237 (454)
Q Consensus 162 ~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~al~----~vs~s 237 (454)
..+..|..++++| |..++++|+.++.++++... ++ ++.+++.++..+..++.+++++.+.+.+++ .++++
T Consensus 19 ~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~ 92 (295)
T PRK11689 19 MVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GF---PRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAI 92 (295)
T ss_pred HHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cc---cccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccch
Confidence 3467899999999 99999999999887765432 11 111222233444444545666666666665 46778
Q ss_pred HHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCc-----------chHHHHHHHHHHHHHHHHHH
Q 039814 238 FTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELN-----------FNMIGFMGAMISNLAFVFRN 306 (454)
Q Consensus 238 ~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~-----------~~~~G~ll~lls~l~~A~~~ 306 (454)
.+.++.++.|+++++++++++|||++++++++++++++|++++..++.+ .+..|++++++|+++||.|+
T Consensus 93 ~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~ 172 (295)
T PRK11689 93 EVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYC 172 (295)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999887654321 23469999999999999999
Q ss_pred HHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039814 307 IFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLD 386 (454)
Q Consensus 307 Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~ 386 (454)
++.||..++ .++...+.. .+.+.+.+.....+.+.. ..+++. +..++..++...+-....++.++
T Consensus 173 v~~k~~~~~--~~~~~~~~~---~~~~~l~~~~~~~~~~~~-~~~~~~---------~~~l~~~~~~t~~~~~l~~~al~ 237 (295)
T PRK11689 173 NVTRKYARG--KNGITLFFI---LTALALWIKYFLSPQPAM-VFSLPA---------IIKLLLAAAAMGFGYAAWNVGIL 237 (295)
T ss_pred HHHhhccCC--CCchhHHHH---HHHHHHHHHHHHhcCccc-cCCHHH---------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998654 345443321 122233332222222110 111111 11111122222222234467799
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhh
Q 039814 387 QISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFL 438 (454)
Q Consensus 387 ~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k 438 (454)
+++|.+.++..+++|++++++|++++||++++.+++|+++++.|+++.....
T Consensus 238 ~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 238 HGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred ccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 9999999999999999999999999999999999999999999998776543
No 10
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.93 E-value=3.1e-23 Score=206.77 Aligned_cols=265 Identities=14% Similarity=0.184 Sum_probs=183.2
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcc-cchhHHH
Q 039814 163 NIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHT-IGHVAATVSMSK-VAVSFTH 240 (454)
Q Consensus 163 ~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~-l~~~~~~~al~~-vs~s~a~ 240 (454)
.+..|..+++++ |..+.++|+.++.+.+++.. ++ ++.+ ++.++..|++.. ....+.+.++++ ++++.+.
T Consensus 20 ~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~-~~----~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~ 90 (299)
T PRK11453 20 FVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFV-AR----PKVP---LNLLLGYGLTISFGQFAFLFCAINFGMPAGLAS 90 (299)
T ss_pred HHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHh-cC----CCCc---hHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 356799999998 99999999988765543332 11 1111 233445555443 334456678887 6889999
Q ss_pred HHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecC---CcchHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 039814 241 IIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTE---LNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKS 317 (454)
Q Consensus 241 ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~---~~~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~ 317 (454)
++.++.|+++.+++++++|||++++++++++++++|+.++...+ .+.+..|++++++++++|+.|.+++||..++.+
T Consensus 91 ~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~ 170 (299)
T PRK11453 91 LVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHST 170 (299)
T ss_pred HHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 99999999999999999999999999999999999998776432 233567999999999999999999999754432
Q ss_pred -CchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHH
Q 039814 318 -VGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIG 396 (454)
Q Consensus 318 -~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~ 396 (454)
........+.+..+.+.+.......|++......+..........+++..+.+++.++. ..++.++++++.+.+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~---l~~~~l~~~~a~~~s~~ 247 (299)
T PRK11453 171 RPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYG---IWGTLLGRYETWRVAPL 247 (299)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHhCCHHHHHHH
Confidence 22233333334443333333333344432111111000000011122333333333333 34567899999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhc
Q 039814 397 NTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLV 439 (454)
Q Consensus 397 ~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~ 439 (454)
.+++|++++++|++++||++++.+++|++++++|+++..+.++
T Consensus 248 ~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 248 SLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 9999999999999999999999999999999999998877654
No 11
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.93 E-value=1.8e-23 Score=203.32 Aligned_cols=254 Identities=15% Similarity=0.156 Sum_probs=192.5
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHhcccchhHHH
Q 039814 162 FNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVA-HTIGHVAATVSMSKVAVSFTH 240 (454)
Q Consensus 162 ~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll-~~l~~~~~~~al~~vs~s~a~ 240 (454)
..+..|..+++...|..+.++|++++.+++.+....+ + +++.++..+..|.+ ..++..+.+.|+++++++.++
T Consensus 4 ~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~----~--~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ 77 (260)
T TIGR00950 4 TGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR----P--PLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA 77 (260)
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc----c--CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence 3467899998765589999999999888765544332 1 23335555666554 578888899999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecC-CcchHHHHHHHHHHHHHHHHHHHHHHhccCCCCCc
Q 039814 241 IIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTE-LNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVG 319 (454)
Q Consensus 241 ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~-~~~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~ 319 (454)
++.++.|+++++++.+++|||++++++.+++++++|+.++...+ .+.+..|++++++++++|+.++++.|+..++.+.+
T Consensus 78 ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~ 157 (260)
T TIGR00950 78 LLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPE 157 (260)
T ss_pred HHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCch
Confidence 99999999999999999999999999999999999998765443 44567899999999999999999999987654444
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHH
Q 039814 320 GMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTM 399 (454)
Q Consensus 320 ~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~l 399 (454)
+.....+.+.++.+++.|.....+.+... +.... ....+..+..+..+ ....++++++.++.+.++..++
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~---~~~~~~a~~~~~~~~~s~~~~~ 227 (260)
T TIGR00950 158 LLQFTGWVLLLGALLLLPFAWFLGPNPQA--LSLQW-----GALLYLGLIGTALA---YFLWNKGLTLVDPSAASILALA 227 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCc--chHHH-----HHHHHHHHHHHHHH---HHHHHHHHhcCCchHHHHHHHH
Confidence 55555555667777777776644332111 11110 00111112222222 2334667999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCchhhHHhHHHHHHHH
Q 039814 400 KRISVIVSSIIIFHTPVQPVNALGAAIAILGT 431 (454)
Q Consensus 400 kpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv 431 (454)
+|+++++++++++||++++.+++|+++++.|+
T Consensus 228 ~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 228 EPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999986
No 12
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.91 E-value=4.9e-22 Score=197.85 Aligned_cols=258 Identities=11% Similarity=0.007 Sum_probs=173.1
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhH
Q 039814 163 NIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAP----KTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSF 238 (454)
Q Consensus 163 ~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~----~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~ 238 (454)
.++.|.. .+++ |..+.++|++++.+++++.+..+++... ..+++.+......++..+.++.++++|+++++++.
T Consensus 24 ~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 101 (296)
T PRK15430 24 PAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLE 101 (296)
T ss_pred HHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence 3456875 6688 9999999999987765443322111000 01223233333444455778889999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCcchHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 039814 239 THIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSV 318 (454)
Q Consensus 239 a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~ 318 (454)
+.++.++.|+++++++++++|||+++++|+++++++.|+.++...+.+.. .++++++++||+|.++.||..++...
T Consensus 102 a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~r~~~~~~~~ 177 (296)
T PRK15430 102 ASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSFAFYGLVRKKIAVEAQT 177 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHHHHHHHHHHhcCCCCch
Confidence 99999999999999999999999999999999999999988754332222 46888999999999999987533222
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcchHHH-HHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHH
Q 039814 319 GGMNYYACLSMMSLLILTPFAIAVEGPQMW-AAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGN 397 (454)
Q Consensus 319 ~~l~~~~~~~~~~~lll~P~~l~~e~~~~~-~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~ 397 (454)
+......+...++.+...+.. ......+ ...+. ....++..++....-....++.+++.+|.+.+...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~ 246 (296)
T PRK15430 178 GMLIETMWLLPVAAIYLFAIA--DSSTSHMGQNPMS---------LNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQ 246 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHc--cCCcccccCCcHH---------HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 222222233333333222211 1110000 00010 00111112222222223456678999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhh
Q 039814 398 TMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 398 ~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~ 437 (454)
+++|++++++|++++||++++.+++|++++++|+.+....
T Consensus 247 ~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 247 YIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998887766544
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.91 E-value=2e-21 Score=193.19 Aligned_cols=254 Identities=14% Similarity=0.122 Sum_probs=185.2
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHH
Q 039814 164 IYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIK 243 (454)
Q Consensus 164 i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~ 243 (454)
...|++++++| |..+.++|++++.+++++....++. +.+++.++..+..|++......+.++++++++++.++++.
T Consensus 29 ~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~ 104 (293)
T PRK10532 29 SLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWRL---RFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALE 104 (293)
T ss_pred HHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHhc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 47899999999 9999999999998776554332221 1234556777788887777778889999999999999999
Q ss_pred hhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeec--C-CcchHHHHHHHHHHHHHHHHHHHHHHhccCCCCCch
Q 039814 244 SGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVT--E-LNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGG 320 (454)
Q Consensus 244 s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~--~-~~~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~ 320 (454)
.+.|+++++++. |++.. +.++.++++|+.++... + .+.+..|++++++++++|+.|.++.||..++. ++
T Consensus 105 ~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~--~~ 176 (293)
T PRK10532 105 FTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAEH--GP 176 (293)
T ss_pred HHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccC--Cc
Confidence 999999998773 55544 45567788998776532 2 23467899999999999999999999986553 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHH
Q 039814 321 MNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMK 400 (454)
Q Consensus 321 l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lk 400 (454)
... .+...++.+++.|+....+.... .++.. . ...++..+.+++.++. ..++.++++++.++++..+++
T Consensus 177 ~~~-~~~~~~~~~~l~~~~~~~~~~~~--~~~~~----~-~~~l~lgv~~t~~~~~---l~~~~~~~~~a~~as~~~~l~ 245 (293)
T PRK10532 177 ATV-AIGSLIAALIFVPIGALQAGEAL--WHWSI----L-PLGLAVAILSTALPYS---LEMIALTRLPTRTFGTLMSME 245 (293)
T ss_pred hHH-HHHHHHHHHHHHHHHHHccCccc--CCHHH----H-HHHHHHHHHHHHHHHH---HHHHHHHhcChhHHHHHHHhH
Confidence 332 34445566666776654332111 11111 0 0122333334444442 234678999999999999999
Q ss_pred HHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhcc
Q 039814 401 RISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQ 440 (454)
Q Consensus 401 pV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~ 440 (454)
|++++++|++++||++++.+++|++++++|++.+.+..++
T Consensus 246 Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 246 PALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999876544
No 14
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.90 E-value=9.5e-22 Score=197.01 Aligned_cols=269 Identities=13% Similarity=0.219 Sum_probs=204.0
Q ss_pred HHHHHHHHh-cCCchHHHHHHHHHHHHHHHH-HH-HHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHH
Q 039814 163 NIYNKKVLN-AFPYPWLTSTLSLACGSLMML-VS-WATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFT 239 (454)
Q Consensus 163 ~i~nK~ll~-~fp~P~~lt~lr~~~a~l~ll-l~-~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a 239 (454)
+..+..+-+ ++..|.+-++...+.-.++.. .. +..+.++..+..++.|++.+.+|++...++++.+.|++|++++.+
T Consensus 29 ~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~ 108 (334)
T PF06027_consen 29 GTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSV 108 (334)
T ss_pred HHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHH
Confidence 344444444 477898888776544333322 22 222222222222344677888899999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCC---------cchHHHHHHHHHHHHHHHHHHHHHH
Q 039814 240 HIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL---------NFNMIGFMGAMISNLAFVFRNIFSK 310 (454)
Q Consensus 240 ~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~---------~~~~~G~ll~lls~l~~A~~~Vl~k 310 (454)
+++.+...+|+++++++++|+|+++.+++|++++++|+.++...|. +....|++++++|++.||+++++.+
T Consensus 109 ~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E 188 (334)
T PF06027_consen 109 QLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEE 188 (334)
T ss_pred HhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988776542 1347999999999999999999999
Q ss_pred hccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhch
Q 039814 311 KGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISP 390 (454)
Q Consensus 311 k~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp 390 (454)
+..++ .+...+.+..++++.++..+.....|..++....|+. ......+..+++-+......-..++..||
T Consensus 189 ~~v~~--~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~-------~~~~~~v~~~~~lf~~y~l~p~~l~~ssA 259 (334)
T PF06027_consen 189 KLVKK--APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTS-------QVIGLLVGYALCLFLFYSLVPIVLRMSSA 259 (334)
T ss_pred Hhccc--CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCCh-------hhHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 98876 4567778888888988888887777876553333432 12222333333333322233346899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhcc
Q 039814 391 LTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQ 440 (454)
Q Consensus 391 ~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~ 440 (454)
+..++......+.+++++++++|+++++..++|.++++.|+++|+..+.+
T Consensus 260 t~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 260 TFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred ceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence 99999999999999999999999999999999999999999999876544
No 15
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.87 E-value=7.7e-20 Score=180.68 Aligned_cols=258 Identities=14% Similarity=0.157 Sum_probs=172.3
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhh--hcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhH
Q 039814 161 VFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATR--IAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSF 238 (454)
Q Consensus 161 ~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~--~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~ 238 (454)
...+.+|...++-+ +. ...+...+.+++.+....+ ..+.+..+++.|...+..++....+..+.+.++++.+++.
T Consensus 15 ~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 91 (281)
T TIGR03340 15 GWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGL 91 (281)
T ss_pred HHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhh
Confidence 44567887776633 43 2444444444433322221 2223333455455555666667788889999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCC-cchHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 039814 239 THIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL-NFNMIGFMGAMISNLAFVFRNIFSKKGMKGKS 317 (454)
Q Consensus 239 a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~-~~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~ 317 (454)
+..+.++.|+++++++++++|||+++++|+|++++++|+.++...+. ..+..|+.++++++++|++|.++.|+..++.+
T Consensus 92 ~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~ 171 (281)
T TIGR03340 92 VYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVP 171 (281)
T ss_pred hhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchh
Confidence 99999999999999999999999999999999999999987764432 34567888999999999999999887643321
Q ss_pred -C-chHHHHHHHHHHHHHHHHHHHHH---hcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHH
Q 039814 318 -V-GGMNYYACLSMMSLLILTPFAIA---VEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLT 392 (454)
Q Consensus 318 -~-~~l~~~~~~~~~~~lll~P~~l~---~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t 392 (454)
. .......+...... .|+... .+........+ ..+..+...++....-+...++.+++.++.+
T Consensus 172 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~ 239 (281)
T TIGR03340 172 AFYSALGYLGIGFLAMG---WPFLLLYLKRHGRSMFPYAR---------QILPSATLGGLMIGGAYALVLWAMTRLPVAT 239 (281)
T ss_pred cccccHHHHHHHHHHHH---HHHHHHHHHHhccchhhhHH---------HHHHHHHHHHHHHHHHHHHHHHHHhhCCceE
Confidence 1 11122222221111 222221 11110000000 0111122222222222334567789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHH
Q 039814 393 FSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFI 433 (454)
Q Consensus 393 ~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~l 433 (454)
.+...+++|++++++|++++||++++.+++|+++++.|+++
T Consensus 240 ~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 240 VVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred EEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 99999999999999999999999999999999999999875
No 16
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.84 E-value=1.5e-17 Score=162.79 Aligned_cols=267 Identities=15% Similarity=0.171 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 039814 157 ALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAV 236 (454)
Q Consensus 157 ~~s~~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~ 236 (454)
..+.......|...++...+......|+..+.++......++.....+..++.+...+..++....+..+++.+++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (292)
T COG0697 17 LLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSA 96 (292)
T ss_pred HHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 33334445667776663325556666888877764333332221112212222334445555567888889999999999
Q ss_pred hHHHHHHhhhhHHHHHHHH-HHhcccCChhhHHHHHhHhhhheeeeecCCcch---HHHHHHHHHHHHHHHHHHHHHHhc
Q 039814 237 SFTHIIKSGEPAFSVLVSR-FLFGETLPMPVYMSLLPIIGGCALAAVTELNFN---MIGFMGAMISNLAFVFRNIFSKKG 312 (454)
Q Consensus 237 s~a~ii~s~~Pifv~lls~-l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~~~---~~G~ll~lls~l~~A~~~Vl~kk~ 312 (454)
+.++++.++.|+++.++++ ++++||++++++.++++++.|+.++...+...+ ..|+.++++++++++++.++.|+.
T Consensus 97 ~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~ 176 (292)
T COG0697 97 SVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRL 176 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999997 677999999999999999999999987665443 589999999999999999999987
Q ss_pred cCCCCCchHHHHH-HHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchH
Q 039814 313 MKGKSVGGMNYYA-CLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPL 391 (454)
Q Consensus 313 ~~~~~~~~l~~~~-~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~ 391 (454)
. + .++..... +..........+... .+.+ ....+... ....+..+..+.. .....+..+++.++.
T Consensus 177 ~-~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~-----~~~~~~g~~~~~i---~~~~~~~~~~~~~~~ 242 (292)
T COG0697 177 S-R--LGPVTLALLLQLLLALLLLLLFFL-SGFG--APILSRAW-----LLLLYLGVFSTGL---AYLLWYYALRLLGAS 242 (292)
T ss_pred c-C--CChHHHHHHHHHHHHHHHHHHHHh-cccc--ccCCHHHH-----HHHHHHHHHHHHH---HHHHHHHHHHhcCch
Confidence 6 2 22322222 222222222223222 1111 00011110 0111111112211 223445678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhh
Q 039814 392 TFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 392 t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~ 437 (454)
..+....++|+++++++++++||+++..+++|+++++.|+.+....
T Consensus 243 ~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 243 LVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999876
No 17
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.82 E-value=9.2e-21 Score=179.27 Aligned_cols=302 Identities=17% Similarity=0.220 Sum_probs=239.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc----CCchHHHHHHHHHHHHHHH-HHHHHhh----hcCCCC--CCHHHHHHHHH
Q 039814 147 KIGIYFATWWALNVVFNIYNKKVLNA----FPYPWLTSTLSLACGSLMM-LVSWATR----IAEAPK--TDLEFWKSLFP 215 (454)
Q Consensus 147 ~l~~~~~lw~~~s~~~~i~nK~ll~~----fp~P~~lt~lr~~~a~l~l-ll~~~~~----~~~~~~--~~~~~~~~ll~ 215 (454)
++-.-...+|.+++++.+.||++++. ...|.+.+..|.++...++ .+.+... +...|. .+.+..+.++|
T Consensus 28 ~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlp 107 (347)
T KOG1442|consen 28 QVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLP 107 (347)
T ss_pred chhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcc
Confidence 34444677889999999999999985 6789999999977665544 4444322 222232 45566788999
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecC---CcchHHHH
Q 039814 216 VAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTE---LNFNMIGF 292 (454)
Q Consensus 216 ~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~---~~~~~~G~ 292 (454)
+++.+.+++.+.|++++|++++++.+=+++.-+|+++++++++|+|-+.....+.+++++|-.+-+-.| ..+++.|.
T Consensus 108 lsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~Gv 187 (347)
T KOG1442|consen 108 LSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGV 187 (347)
T ss_pred hhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhh
Confidence 999999999999999999999999999999999999999999999999999999999999987766555 34678999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHHhHHHHHHhhchHHHHHHHHHH
Q 039814 293 MGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEG-PQMWAAGWQKAIAQIGPNFVWWVAAQS 371 (454)
Q Consensus 293 ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~-~~~~~~~~~~~~~~~~~~~l~~ll~~~ 371 (454)
++++.|.++-|+..++.||......-.-..+.++.+..+.++++|..++... ...+.... .....++..+..+|
T Consensus 188 ifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~-----l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 188 IFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPH-----LPAIKFWILMTLSG 262 (347)
T ss_pred HHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCccc-----chHHHHHHHHHHHH
Confidence 9999999999999999998654321112345567788888888887664322 22211000 01123445577899
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhccccccccccCCC
Q 039814 372 IFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQDLGIYVTKSKP 451 (454)
Q Consensus 372 l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~~~~~~~~~~~p 451 (454)
+++|..|+...+-++-+||+++.+.++.|...-.++++.+.+|.-+..-|-|-++++.|..+|.+.|..+.++..+.+.|
T Consensus 263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~~s~ 342 (347)
T KOG1442|consen 263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQRSP 342 (347)
T ss_pred HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccCCCc
Confidence 99999999998889999999999999999999999999999999999999999999999999999998877665555555
Q ss_pred CC
Q 039814 452 SL 453 (454)
Q Consensus 452 ~~ 453 (454)
+.
T Consensus 343 ~~ 344 (347)
T KOG1442|consen 343 AT 344 (347)
T ss_pred cc
Confidence 44
No 18
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.81 E-value=1.5e-17 Score=160.24 Aligned_cols=292 Identities=14% Similarity=0.167 Sum_probs=226.7
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHh--------cCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHH
Q 039814 142 AAQRLKIGIYFATWWALNVVFNIYNKKVLN--------AFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSL 213 (454)
Q Consensus 142 ~~~~~~l~~~~~lw~~~s~~~~i~nK~ll~--------~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~l 213 (454)
..+...+.+++.--|+..+...++...+.. .|.+|.++.+.|=+.+.++-... .....+.. ..++.|...
T Consensus 9 ~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~-l~~~k~~~-~~~apl~~y 86 (327)
T KOG1581|consen 9 ANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAM-LKWWKKEL-SGVAPLYKY 86 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHH-HhcccccC-CCCCchhHH
Confidence 444555555555566777777766666654 27789999999866666554222 11111112 223446778
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCC--------
Q 039814 214 FPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL-------- 285 (454)
Q Consensus 214 l~~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~-------- 285 (454)
...++.+.++..+.+.|++|++-++..+-|++.-+.+++++.+++|+|++..+++...++.+||.+....+.
T Consensus 87 ~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g 166 (327)
T KOG1581|consen 87 SLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSG 166 (327)
T ss_pred hHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccC
Confidence 889999999999999999999999999999999999999999999999999999999999999987765421
Q ss_pred -cchHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHH
Q 039814 286 -NFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFV 364 (454)
Q Consensus 286 -~~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l 364 (454)
...++|+.++....+..++.+..++++.++..+++...+.+..+++.++.... ++..+. .+. ..+ .....+..+
T Consensus 167 ~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~-~~~-av~--F~~~hp~~~ 241 (327)
T KOG1581|consen 167 RENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGH-LLP-AVS--FIKEHPDVA 241 (327)
T ss_pred CCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCC-Cch-HHH--HHHcChhHH
Confidence 14589999999999999999999999999888888888877777776654432 222221 111 111 122345666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhcc
Q 039814 365 WWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQ 440 (454)
Q Consensus 365 ~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~ 440 (454)
+.++..+.++...+.+.|+.+++.||++....++.+.+++++++.++||.++++.|++|..+++.|+++-...|++
T Consensus 242 ~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 242 FDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 7777777888777888899999999999999999999999999999999999999999999999999988877766
No 19
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.80 E-value=3.6e-17 Score=159.32 Aligned_cols=228 Identities=11% Similarity=0.069 Sum_probs=148.9
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH-Hhhhc-----CCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 039814 162 FNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSW-ATRIA-----EAPKT-DLEFWKSLFPVAVAHTIGHVAATVSMSKV 234 (454)
Q Consensus 162 ~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~-~~~~~-----~~~~~-~~~~~~~ll~~gll~~l~~~~~~~al~~v 234 (454)
..+..|. +.+.+ |..+.++|++++.+++++.. .++++ +.++. +++.+......|++..++..++++|++++
T Consensus 17 ~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~ 94 (256)
T TIGR00688 17 MYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNG 94 (256)
T ss_pred HHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3356787 56677 99999999998877654332 22211 11111 12223345666777778889999999999
Q ss_pred chhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCcchHHHHHHHHHHHHHHHHHHHHHHhccC
Q 039814 235 AVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMK 314 (454)
Q Consensus 235 s~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~~~~~G~ll~lls~l~~A~~~Vl~kk~~~ 314 (454)
+++.++++.++.|+|+++++++++|||++++++++++++++|++++..++.+.+ .++++++++|+.|.+..||..+
T Consensus 95 ~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~~ 170 (256)
T TIGR00688 95 SSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALKN 170 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999987654332222 3578899999999999998754
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHH----HhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhch
Q 039814 315 GKSVGGMNYYACLSMMSLLILTPFAI----AVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISP 390 (454)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~lll~P~~l----~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp 390 (454)
++ ...... +.+.+.|... ..+.+........ . .+..++..+++........+..+++.++
T Consensus 171 ~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~l~~~g~~t~i~~~l~~~a~~~~~a 234 (256)
T TIGR00688 171 TD-LAGFCL-------ETLSLMPVAIYYLLQTDFATVQQTNPF-------P-IWLLLVLAGLITGTPLLAFVIAANRLPL 234 (256)
T ss_pred CC-cchHHH-------HHHHHHHHHHHHHHHhccCcccccCch-------h-HHHHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence 32 111111 1111222221 1111100000000 0 0111112222222223344567899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 039814 391 LTFSIGNTMKRISVIVSSIII 411 (454)
Q Consensus 391 ~t~sv~~~lkpV~~ills~l~ 411 (454)
.+.++..+++|++++++|+++
T Consensus 235 ~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 235 NLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999875
No 20
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.78 E-value=1.1e-17 Score=154.27 Aligned_cols=281 Identities=15% Similarity=0.186 Sum_probs=219.3
Q ss_pred HHHHHHHHHHHHHHHHHhc--CCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039814 154 TWWALNVVFNIYNKKVLNA--FPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSM 231 (454)
Q Consensus 154 lw~~~s~~~~i~nK~ll~~--fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~al 231 (454)
.+.+.++.+.+.||++++. |.--+.+.+.|-+++.+-+.+....+..+.+ ....+.++|.+++.+..++...-++
T Consensus 13 sYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR---~t~aK~WfpiSfLLv~MIyt~SKsL 89 (309)
T COG5070 13 SYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR---LTKAKKWFPISFLLVVMIYTSSKSL 89 (309)
T ss_pred HHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee---hhhhhhhcCHHHHHHHHHHhcccce
Confidence 3448899999999999985 5555677777755554444444333333332 3335678899999988888889999
Q ss_pred cccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCC--------cchHHHHHHHHHHHHHHH
Q 039814 232 SKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL--------NFNMIGFMGAMISNLAFV 303 (454)
Q Consensus 232 ~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~--------~~~~~G~ll~lls~l~~A 303 (454)
+|.+++.+++.|+++.+.++..+..++|.|++-....+.++.+..-..+.++|. ..| .|++|+...+++-+
T Consensus 90 qyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Nclssa 168 (309)
T COG5070 90 QYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLSSA 168 (309)
T ss_pred eeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHhHH
Confidence 999999999999999999999999999999999999999999998888888876 345 59999999999999
Q ss_pred HHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Q 039814 304 FRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYM 383 (454)
Q Consensus 304 ~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~ 383 (454)
.+.+..||..+-........+.|...++..+++.+.+++|....- .. ........+.+++.+|+++++..+..-|
T Consensus 169 afVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~--n~---annl~~d~l~am~ISgl~svgiSy~saW 243 (309)
T COG5070 169 AFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG--NL---ANNLSVDSLMAMFISGLCSVGISYCSAW 243 (309)
T ss_pred HHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc--hh---hcCCChHHHHHHHHHHHHHhhhhhccce
Confidence 999888876543223333344455677777777777766653211 01 0112223455677899999999888889
Q ss_pred HhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhccccc
Q 039814 384 SLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQDLG 443 (454)
Q Consensus 384 ~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~~~~ 443 (454)
+++-+|.++.++.+.++..-..+.|.++|||+.+...+..+.+-...-.+|...|.++++
T Consensus 244 cvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q 303 (309)
T COG5070 244 CVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ 303 (309)
T ss_pred eEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999888889888765443
No 21
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.77 E-value=5.8e-18 Score=157.15 Aligned_cols=273 Identities=16% Similarity=0.180 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHHHh-----------cCCchHHHHHHHHHHHHHHHHHHHH-hhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 039814 157 ALNVVFNIYNKKVLN-----------AFPYPWLTSTLSLACGSLMMLVSWA-TRIAEAPKTDLEFWKSLFPVAVAHTIGH 224 (454)
Q Consensus 157 ~~s~~~~i~nK~ll~-----------~fp~P~~lt~lr~~~a~l~lll~~~-~~~~~~~~~~~~~~~~ll~~gll~~l~~ 224 (454)
.+.+.+.+....+.+ .|.|...+.+.|..+..++.-+... ++..+. + ...-+.....++-+.+.+
T Consensus 23 vCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~-D--~t~~~~YaAcs~sYLlAM 99 (337)
T KOG1580|consen 23 VCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEI-D--NTPTKMYAACSASYLLAM 99 (337)
T ss_pred heehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccc-c--CCcchHHHHHHHHHHHHH
Confidence 344445565555544 2667777888888877766533222 221121 1 111245678888888899
Q ss_pred HHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCc-------chHHHHHHHHH
Q 039814 225 VAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELN-------FNMIGFMGAMI 297 (454)
Q Consensus 225 ~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~-------~~~~G~ll~ll 297 (454)
+.+|.+++|++-++..+-|++.||-+++++.++.+++++|++++.++++++||++....+.. ..-.|-++.++
T Consensus 100 VssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~l 179 (337)
T KOG1580|consen 100 VSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLIL 179 (337)
T ss_pred HhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988765432 22478999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHH
Q 039814 298 SNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLY 377 (454)
Q Consensus 298 s~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~ 377 (454)
|....+.....++|....+.......+.++.+.+.+.+..- +.+.+. +|.. +. ...-.|..+|-+..-++.+.+.
T Consensus 180 SL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g-~lfTGE-lweF-~y--F~~RhP~~~~~l~l~ai~s~LG 254 (337)
T KOG1580|consen 180 SLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAG-LLFTGE-LWEF-FY--FVQRHPYVFWDLTLLAIASCLG 254 (337)
T ss_pred HHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhh-heehhh-HHHH-HH--HHHhccHHHHHHHHHHHHHHhh
Confidence 99999999888887654443344444445555565554432 222222 2211 00 1122345566666777778888
Q ss_pred HHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhh
Q 039814 378 NQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 378 n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~ 437 (454)
+.+.|..+...||++-|+.++.+..++++.|+++|+++++..||+|..+++.|+..-...
T Consensus 255 Q~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~ 314 (337)
T KOG1580|consen 255 QWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVD 314 (337)
T ss_pred hHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence 888899999999999999999999999999999999999999999999999998765443
No 22
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.72 E-value=9.4e-16 Score=145.86 Aligned_cols=280 Identities=17% Similarity=0.229 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHHHHh-------cCCchHHHHHHHHHHHHHHHHHHHHhhhcCC-C---C-----C-----CHHHHHHHHH
Q 039814 157 ALNVVFNIYNKKVLN-------AFPYPWLTSTLSLACGSLMMLVSWATRIAEA-P---K-----T-----DLEFWKSLFP 215 (454)
Q Consensus 157 ~~s~~~~i~nK~ll~-------~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~-~---~-----~-----~~~~~~~ll~ 215 (454)
.....+.+..||.=+ .|.+|+..+...|+.-++++.++...+.+.. + . . ..+ ....++
T Consensus 13 vsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~ 91 (372)
T KOG3912|consen 13 VSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLP 91 (372)
T ss_pred hhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecC
Confidence 334444567788754 2788999988888877676655443322110 0 0 0 011 234677
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCC----------
Q 039814 216 VAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL---------- 285 (454)
Q Consensus 216 ~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~---------- 285 (454)
-+++...+..+.+.|+.+++++..++++....+|+.+++.-+++++++.++|+|+..+..|++++...|.
T Consensus 92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~ 171 (372)
T KOG3912|consen 92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDY 171 (372)
T ss_pred hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccc
Confidence 8899888888899999999999999999999999999999999999999999999999999998876542
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHH----HHHHHhcc------hHHHHHhHHHH
Q 039814 286 NFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILT----PFAIAVEG------PQMWAAGWQKA 355 (454)
Q Consensus 286 ~~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~----P~~l~~e~------~~~~~~~~~~~ 355 (454)
+.-..|+++.+++-+.-|.+.++.+|.+++..++|+...++..++|+.++. |+..+.-+ +.-..++|.+.
T Consensus 172 s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~ 251 (372)
T KOG3912|consen 172 SSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDA 251 (372)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHH
Confidence 233789999999999999999999998888889999998888877755443 33332222 11112345554
Q ss_pred HHhhc--hHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHH
Q 039814 356 IAQIG--PNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFI 433 (454)
Q Consensus 356 ~~~~~--~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~l 433 (454)
+.... +.+...+....+.-.++|+......+..|+++-.+...++..+..+++.....|.+...|+.|.++.+.|+++
T Consensus 252 ~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~l 331 (372)
T KOG3912|consen 252 FAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIIL 331 (372)
T ss_pred HHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44333 3332233333333335787887788999999999999999999999999999999999999999999999999
Q ss_pred HHhh
Q 039814 434 YSQF 437 (454)
Q Consensus 434 y~~~ 437 (454)
|+..
T Consensus 332 Y~~i 335 (372)
T KOG3912|consen 332 YNQI 335 (372)
T ss_pred HHHH
Confidence 9854
No 23
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.72 E-value=7.5e-15 Score=138.23 Aligned_cols=251 Identities=14% Similarity=0.150 Sum_probs=185.3
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHh
Q 039814 165 YNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKS 244 (454)
Q Consensus 165 ~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~s 244 (454)
+.|.++..+. |.-++.+|..++.++++..+.-.++ +.++++|..+...|......+.++|.++..++.+.+..|-.
T Consensus 30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~RPwr~---r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF 105 (292)
T COG5006 30 FAKSLFPLVG-AAGVTALRLAIAALILLALFRPWRR---RLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF 105 (292)
T ss_pred HHHHHccccC-hhhHHHHHHHHHHHHHHHHhhHHHh---ccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence 5588888888 8999999999998887666543332 23466688899999998888999999999999999999999
Q ss_pred hhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeec---CCcchHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchH
Q 039814 245 GEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVT---ELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGM 321 (454)
Q Consensus 245 ~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~---~~~~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l 321 (454)
+-|+.+++++ .+|. +...-+.+++.|+.+..-. ..+.|..|..+++.+..||+.|.+..||.-+. .+.-
T Consensus 106 ~GPL~vA~~~----sRr~--~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~--~~g~ 177 (292)
T COG5006 106 TGPLAVALLS----SRRL--RDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA--EHGT 177 (292)
T ss_pred ccHHHHHHHh----ccch--hhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc--CCCc
Confidence 9999887754 3443 3444455566666544322 24568999999999999999999999987532 3344
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHH
Q 039814 322 NYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKR 401 (454)
Q Consensus 322 ~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkp 401 (454)
.-.+..+.++.++..|+.....++.++..... +..+...++++.+-|..- ..++++.++-++++...++|
T Consensus 178 ~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll-------~laLgvavlSSalPYsLE---miAL~rlp~~~F~~LlSLeP 247 (292)
T COG5006 178 AGVAVGMLVAALIVLPIGAAQAGPALFSPSLL-------PLALGVAVLSSALPYSLE---MIALRRLPARTFGTLLSLEP 247 (292)
T ss_pred hHHHHHHHHHHHHHhhhhhhhcchhhcChHHH-------HHHHHHHHHhcccchHHH---HHHHhhCChhHHHHHHHhhH
Confidence 44556677788888998875555544221110 011112233444444433 33589999999999999999
Q ss_pred HHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhh
Q 039814 402 ISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 402 V~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~ 437 (454)
.++.+.|++++||.+|+.||+|++.++.+..=.+..
T Consensus 248 a~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt 283 (292)
T COG5006 248 ALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLT 283 (292)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999887644443
No 24
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.71 E-value=1.4e-14 Score=144.00 Aligned_cols=249 Identities=17% Similarity=0.163 Sum_probs=172.3
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHH-HHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH
Q 039814 164 IYNKKVLNAFPYPWLTSTLSLACGSLMMLVS-WATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHII 242 (454)
Q Consensus 164 i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~-~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii 242 (454)
+..|.+. +++.++.. |..++.+++.+. ...+. + +...++.+..-+..|++...++.+++.++++++++.+..+
T Consensus 18 ~~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~-~-~~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i 91 (290)
T TIGR00776 18 LINVKIG-GGPYSQTL---GTTFGALILSIAIAIFVL-P-EFWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPI 91 (290)
T ss_pred HHHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhC-C-cccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHH
Confidence 3446655 55644443 566665554332 22221 1 1222444555566667788899999999999999999988
Q ss_pred Hh-hhhHHHHHHHHHHhcccCChhh----HHHHHhHhhhheeeeecCCc-------ch-HHHHHHHHHHHHHHHHHHHHH
Q 039814 243 KS-GEPAFSVLVSRFLFGETLPMPV----YMSLLPIIGGCALAAVTELN-------FN-MIGFMGAMISNLAFVFRNIFS 309 (454)
Q Consensus 243 ~s-~~Pifv~lls~l~l~er~s~~~----~lsl~li~~Gv~l~~~~~~~-------~~-~~G~ll~lls~l~~A~~~Vl~ 309 (454)
-+ +.|+++.+.+.+++||+.++++ ++|++++++|+.+....+.+ .+ ..|++++++|+++|++|.+..
T Consensus 92 ~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~ 171 (290)
T TIGR00776 92 STGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVA 171 (290)
T ss_pred HHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 88 8899999999999999999999 99999999999987653221 33 689999999999999999999
Q ss_pred HhccCCCCCchHHH---HHHHHH-HHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHh
Q 039814 310 KKGMKGKSVGGMNY---YACLSM-MSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSL 385 (454)
Q Consensus 310 kk~~~~~~~~~l~~---~~~~~~-~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l 385 (454)
|+.. .++... ..+... .+.++..+. . .+.+ +.. ...+..+..|++...-+...+...
T Consensus 172 ~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~-~~~~------~~~-------~~~~~~~~~Gi~~~ia~~~y~~~~ 232 (290)
T TIGR00776 172 KAFG----VDGLSVLLPQAIGMVIGGIIFNLGH-I-LAKP------LKK-------YAILLNILPGLMWGIGNFFYLFSA 232 (290)
T ss_pred HHcC----CCcceehhHHHHHHHHHHHHHHHHH-h-cccc------hHH-------HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9752 344443 232222 232332222 0 0111 100 011111224444333333444667
Q ss_pred h-hhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhH----HhHHHHHHHHHHHHhh
Q 039814 386 D-QISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNA----LGAAIAILGTFIYSQF 437 (454)
Q Consensus 386 ~-~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~i----lG~~Lil~Gv~ly~~~ 437 (454)
+ +.++.++++...++|+.+.++++++++|..++.|+ +|+++++.|+.+....
T Consensus 233 ~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 233 QPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 8 99999999999999999999999999999999999 9999999999886543
No 25
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.71 E-value=3.9e-16 Score=139.70 Aligned_cols=146 Identities=34% Similarity=0.562 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCC-----CCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhh--chHH
Q 039814 291 GFMGAMISNLAFVFRNIFSKKGMKG-----KSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQI--GPNF 363 (454)
Q Consensus 291 G~ll~lls~l~~A~~~Vl~kk~~~~-----~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~--~~~~ 363 (454)
|++++++|+++.++++++.|+.+++ ...++.++..+.+..+.+++.|.++..|++............+. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7899999999999999999998877 57889999999999999999999998888764432221111011 2355
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHh
Q 039814 364 VWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQ 436 (454)
Q Consensus 364 l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~ 436 (454)
+..++.+|++++++|+..|.+++++||+++++.+.+|+++.+++|+++|||++++.+++|+++++.|+++|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 6778889999999999999999999999999999999999999999999999999999999999999999975
No 26
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.64 E-value=2.9e-15 Score=147.93 Aligned_cols=228 Identities=14% Similarity=0.186 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCC--
Q 039814 208 EFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL-- 285 (454)
Q Consensus 208 ~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~-- 285 (454)
+..+..+..+.+....++.+|.|+.+++++..+++.+++-+|+..++.++.+||+++.+.+++++.++|++++..+|.
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 445556667777788899999999999999999999999999999999999999999999999999999999988743
Q ss_pred ------cchHHHHHHHHHHHHHHHHHHHHHHhccCCC--CCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHH
Q 039814 286 ------NFNMIGFMGAMISNLAFVFRNIFSKKGMKGK--SVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIA 357 (454)
Q Consensus 286 ------~~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~--~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~ 357 (454)
+-...|.++++++++.||+|.++.||...++ .++.-.+.++..++.++++.|..++.+.... +.+...
T Consensus 237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~--e~F~lP-- 312 (416)
T KOG2765|consen 237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE--ERFELP-- 312 (416)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc--CcccCC--
Confidence 2347999999999999999999999876554 5666677788888888888887665332100 000000
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhh
Q 039814 358 QIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 358 ~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~ 437 (454)
....+...++.+.+..++--+++-++.-.++|+...+...+.-..+++...++=|.++++.+++|.+.+++|.+..+..
T Consensus 313 -~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 313 -SSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNIS 391 (416)
T ss_pred -CCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecc
Confidence 0001111222233333333456666788899999999999999999999999999999999999999999999999877
Q ss_pred hcc
Q 039814 438 LVQ 440 (454)
Q Consensus 438 k~~ 440 (454)
...
T Consensus 392 ~~~ 394 (416)
T KOG2765|consen 392 SEN 394 (416)
T ss_pred ccc
Confidence 553
No 27
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.64 E-value=8e-15 Score=138.98 Aligned_cols=286 Identities=15% Similarity=0.154 Sum_probs=212.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc--CC-chHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHH
Q 039814 145 RLKIGIYFATWWALNVVFNIYNKKVLNA--FP-YPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHT 221 (454)
Q Consensus 145 ~~~l~~~~~lw~~~s~~~~i~nK~ll~~--fp-~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~ 221 (454)
..+..++++-.+.+..++.....++++. |. +.|.+++.|+++-..+.++-. ...+ ++.+..-|+....++++-.
T Consensus 41 w~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~-~~~~--~k~r~iP~rtY~~la~~t~ 117 (367)
T KOG1582|consen 41 WTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIEL-QLIQ--TKRRVIPWRTYVILAFLTV 117 (367)
T ss_pred hhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEE-Eeec--ccceecchhHhhhhHhhhh
Confidence 4456666777777778888888888874 54 889999999887654433211 1111 1111223777888888888
Q ss_pred HHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecC----CcchHHHHHHHHH
Q 039814 222 IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTE----LNFNMIGFMGAMI 297 (454)
Q Consensus 222 l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~----~~~~~~G~ll~ll 297 (454)
+.+.+++-++.|.+-+...+.|++.-+-+++.+.++-|+|+++..+.+..+...|.++.+..| .+||..|+++.-+
T Consensus 118 gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsg 197 (367)
T KOG1582|consen 118 GTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISG 197 (367)
T ss_pred hccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHH
Confidence 889999999999999999999999999999999999999999999999999999999888766 4688999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHH-HHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHH
Q 039814 298 SNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLI-LTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHL 376 (454)
Q Consensus 298 s~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~ll-l~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l 376 (454)
|.++.|+-.-+++|.++..+-+......|...+|+.+ +.|..+..|-... |..-. +.........+.-++.+|+
T Consensus 198 ALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a----~~fca-ehp~~tyGy~~~~s~~gyl 272 (367)
T KOG1582|consen 198 ALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSA----WTFCA-EHPVRTYGYAFLFSLAGYL 272 (367)
T ss_pred HHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhh----hHHHH-hCcHhHHHHHHHHHHHhHh
Confidence 9999999888888887765444443333334444443 3454444444333 32211 1111122223344455555
Q ss_pred HHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhh
Q 039814 377 YNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFL 438 (454)
Q Consensus 377 ~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k 438 (454)
...+....++..++.+++..++.+..+++++|+++|..|+|.+...|..+++.|+++--+.|
T Consensus 273 G~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 273 GIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred hHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 55555567899999999999999999999999999999999999999999999999876665
No 28
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.60 E-value=1.3e-13 Score=133.41 Aligned_cols=211 Identities=17% Similarity=0.180 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCc---
Q 039814 210 WKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELN--- 286 (454)
Q Consensus 210 ~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~--- 286 (454)
..++...++++++.+.+.+.++++++++..+++..+..+++++++++++|+|+++++|+++++.++|+.+...++..
T Consensus 17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~ 96 (244)
T PF04142_consen 17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSD 96 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccc
Confidence 45567778889999999999999999999999999999999999999999999999999999999999987643211
Q ss_pred --------------chHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhH
Q 039814 287 --------------FNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGW 352 (454)
Q Consensus 287 --------------~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~ 352 (454)
....|++++++++++.++..++.+|.+|+.+.+...........|.++........++......++
T Consensus 97 ~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~ 176 (244)
T PF04142_consen 97 NSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGF 176 (244)
T ss_pred cccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCc
Confidence 136899999999999999999999999886633222222334444444444333333322111111
Q ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHH
Q 039814 353 QKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIA 427 (454)
Q Consensus 353 ~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Li 427 (454)
- ...+...+..++..++.+.... ..+++.+...-+....+.-+++.+.++++||.+++...++|..++
T Consensus 177 f---~G~~~~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 177 F---HGYSWWVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred h---hhcchHHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 0 1111222333444555544433 357999999999999999999999999999999999999998763
No 29
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.54 E-value=1.8e-11 Score=118.35 Aligned_cols=264 Identities=14% Similarity=0.100 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH--HHHhhhcCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
Q 039814 155 WWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLV--SWATRIAEAPK--TDLEFWKSLFPVAVAHTIGHVAATVS 230 (454)
Q Consensus 155 w~~~s~~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll--~~~~~~~~~~~--~~~~~~~~ll~~gll~~l~~~~~~~a 230 (454)
-|.++-..-++.|. ++..| +..+...|.+-+..+++. ...++.++... .+.+.+......+++-+.+-..+.+|
T Consensus 15 Ay~lwG~lp~y~kl-l~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWA 92 (293)
T COG2962 15 AYLLWGLLPLYFKL-LEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWA 92 (293)
T ss_pred HHHHHHHHHHHHHH-HccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhhee
Confidence 33344344456664 45556 778888897776665432 22222211111 11122333445555556666777889
Q ss_pred hcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 039814 231 MSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSK 310 (454)
Q Consensus 231 l~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~~~~~G~ll~lls~l~~A~~~Vl~k 310 (454)
...-.+-.+++=....|++.++++.+|+|||+++.+|++++++.+||..-.....++++....+ +++|++|..+-|
T Consensus 93 vn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~Ygl~RK 168 (293)
T COG2962 93 VNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGLYGLLRK 168 (293)
T ss_pred cCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHHHHHHHH
Confidence 8887777777888899999999999999999999999999999999998777777777665433 678899988777
Q ss_pred hccCCCCCchHHHHHHHHHHHHHHHHHHHHH----hcc-hHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHh
Q 039814 311 KGMKGKSVGGMNYYACLSMMSLLILTPFAIA----VEG-PQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSL 385 (454)
Q Consensus 311 k~~~~~~~~~l~~~~~~~~~~~lll~P~~l~----~e~-~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l 385 (454)
+. + ++...-++.-++ .+.|.++. .+. +++. .........++++.|+....=-...-..-
T Consensus 169 ~~-~---v~a~~g~~lE~l----~l~p~al~yl~~l~~~~~~~--------~~~~~~~~~LLv~aG~vTavpL~lf~~aa 232 (293)
T COG2962 169 KL-K---VDALTGLTLETL----LLLPVALIYLLFLADSGQFL--------QQNANSLWLLLVLAGLVTAVPLLLFAAAA 232 (293)
T ss_pred hc-C---CchHHhHHHHHH----HHhHHHHHHHHHHhcCchhh--------hcCCchHHHHHHHhhHHHHHHHHHHHHHH
Confidence 64 2 444443332222 23333332 221 1100 00112223344444544332111112346
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhcc
Q 039814 386 DQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQ 440 (454)
Q Consensus 386 ~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~ 440 (454)
++++-.+.++..+++|....+++++++||+++..++++.+.+-.|+.+|.....+
T Consensus 233 ~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~ 287 (293)
T COG2962 233 KRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLY 287 (293)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999877544
No 30
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.52 E-value=1.9e-15 Score=142.98 Aligned_cols=264 Identities=14% Similarity=0.119 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 039814 156 WALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAE--APKTDLEFWKSLFPVAVAHTIGHVAATVSMSK 233 (454)
Q Consensus 156 ~~~s~~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~--~~~~~~~~~~~ll~~gll~~l~~~~~~~al~~ 233 (454)
|.+|..+.+..|.+.++ |..+..-|++.-.+.........+.. -|+-. + ++++.-|+.++.+..+.++|++|
T Consensus 47 ~ff~~~~vv~t~~~e~~---p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~-R--~~LiLRg~mG~tgvmlmyya~~~ 120 (346)
T KOG4510|consen 47 YFFNSCMVVSTKVLEND---PMELASFRLLVRMLITYPCLIYYMQPVIGPEGK-R--KWLILRGFMGFTGVMLMYYALMY 120 (346)
T ss_pred HHHhhHHHhhhhhhccC---hhHhhhhhhhhehhhhheEEEEEeeeeecCCCc-E--EEEEeehhhhhhHHHHHHHHHhh
Confidence 67777777777766654 77777777554433322211111111 12211 1 34577788888888899999999
Q ss_pred cchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeec-----CC---------cchHHHHHHHHHHH
Q 039814 234 VAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVT-----EL---------NFNMIGFMGAMISN 299 (454)
Q Consensus 234 vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~-----~~---------~~~~~G~ll~lls~ 299 (454)
++.+-+.+|...+|.|+.++++.++||++++...++..+.+.||++++-. |. +.+..|...++.++
T Consensus 121 mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~ 200 (346)
T KOG4510|consen 121 MSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSV 200 (346)
T ss_pred cchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhH
Confidence 99999999999999999999999999999999999999999999988642 11 12457888888888
Q ss_pred HHHHHHHHHHHhccCCCC-CchHHHHHHHHHHHHHHHHHH-HHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHH
Q 039814 300 LAFVFRNIFSKKGMKGKS-VGGMNYYACLSMMSLLILTPF-AIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLY 377 (454)
Q Consensus 300 l~~A~~~Vl~kk~~~~~~-~~~l~~~~~~~~~~~lll~P~-~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~ 377 (454)
+.-|.--++.|+.-|+.+ +-.+.++. .++.+..+.. +.+.+. + +++.+.+. +.++.-|++++..
T Consensus 201 lf~asvyIilR~iGk~~h~~msvsyf~---~i~lV~s~I~~~~ig~~-~-lP~cgkdr---------~l~~~lGvfgfig 266 (346)
T KOG4510|consen 201 LFGASVYIILRYIGKNAHAIMSVSYFS---LITLVVSLIGCASIGAV-Q-LPHCGKDR---------WLFVNLGVFGFIG 266 (346)
T ss_pred hhhhhHHHHHHHhhccccEEEEehHHH---HHHHHHHHHHHhhccce-e-cCccccce---------EEEEEehhhhhHH
Confidence 887777777776534311 11223332 2222211111 111111 1 11222111 2233456777777
Q ss_pred HHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhc
Q 039814 378 NQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLV 439 (454)
Q Consensus 378 n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~ 439 (454)
+....+.+++--+-..++..+..-+++.++.+++|||.+|++.++|+++++....+....|.
T Consensus 267 QIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw 328 (346)
T KOG4510|consen 267 QILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW 328 (346)
T ss_pred HHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence 76677777666666678899999999999999999999999999999999988877766553
No 31
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.50 E-value=2.2e-11 Score=120.81 Aligned_cols=224 Identities=16% Similarity=0.171 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecC------
Q 039814 211 KSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTE------ 284 (454)
Q Consensus 211 ~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~------ 284 (454)
.++...++++++.+-+.+.++.+.+++++++...+..+.|+++..+++++|.++++|.++++.+.|+.+.-.+.
T Consensus 93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a 172 (345)
T KOG2234|consen 93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGA 172 (345)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 44556667787777788999999999999999999999999999999999999999999999999999876221
Q ss_pred -----CcchHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhh
Q 039814 285 -----LNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQI 359 (454)
Q Consensus 285 -----~~~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~ 359 (454)
....+.|+...+.++++-++-+++.+|.+|+.+.+-..-.--+..+|.++.....+..++.... |...+...
T Consensus 173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~---~~gff~G~ 249 (345)
T KOG2234|consen 173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAIN---EYGFFYGY 249 (345)
T ss_pred cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccc---cCCccccc
Confidence 1234789999999999999999999999987653322111112333333333222223332211 22222222
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhc
Q 039814 360 GPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLV 439 (454)
Q Consensus 360 ~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~ 439 (454)
....+..++..++.+.+... .+++.+-..-.....+..+++.+.|+.+||-++|...++|+.+++..+++|+..+.
T Consensus 250 s~~vw~vVl~~a~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~ 325 (345)
T KOG2234|consen 250 SSIVWLVVLLNAVGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA 325 (345)
T ss_pred cHHHHHHHHHHhccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence 23333445555555544432 45778888877888888899999999999999999999999999999999997776
Q ss_pred cc
Q 039814 440 QD 441 (454)
Q Consensus 440 ~~ 441 (454)
++
T Consensus 326 ~~ 327 (345)
T KOG2234|consen 326 RD 327 (345)
T ss_pred cc
Confidence 65
No 32
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.47 E-value=1.7e-13 Score=130.45 Aligned_cols=269 Identities=16% Similarity=0.222 Sum_probs=186.7
Q ss_pred HHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHH-hhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcc-cchhHHH
Q 039814 164 IYNKKVLNAFPY-PWLTSTLSLACGSLMMLVSWA-TRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSK-VAVSFTH 240 (454)
Q Consensus 164 i~nK~ll~~fp~-P~~lt~lr~~~a~l~lll~~~-~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~al~~-vs~s~a~ 240 (454)
+.-..+.++.|- --.+++.||+.-.+--++..- ....+ |+...+ ..+..-.++.+.+++.|+++++ ++.+...
T Consensus 20 v~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k-~kiplk---~Y~i~V~mFF~vnv~NN~al~f~I~~PlHi 95 (330)
T KOG1583|consen 20 VFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVK-PKIPLK---DYAITVAMFFIVNVTNNYALKFNIPMPLHI 95 (330)
T ss_pred HHHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccC-CCCchh---hhheehheeeeeeeeccceeeecccceEEE
Confidence 344666666552 346778887665444322211 11111 333322 2333334444556788999987 8999999
Q ss_pred HHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeec---CCc--------------c--hHHHHHHHHHHHHH
Q 039814 241 IIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVT---ELN--------------F--NMIGFMGAMISNLA 301 (454)
Q Consensus 241 ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~---~~~--------------~--~~~G~ll~lls~l~ 301 (454)
++++..++-++++++++.|+|++.+++.+++++.+|+.+++.. |.. + -..|+.+..++.+.
T Consensus 96 IfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~ 175 (330)
T KOG1583|consen 96 IFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLL 175 (330)
T ss_pred EEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987642 110 0 14688888888888
Q ss_pred HHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHH----------hhchHHHHHHHHHH
Q 039814 302 FVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIA----------QIGPNFVWWVAAQS 371 (454)
Q Consensus 302 ~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~----------~~~~~~l~~ll~~~ 371 (454)
-|.-.++++...+++.-++-..+.+.-.. .+|+.++...+-. ..|..... ...|..++.+++++
T Consensus 176 sa~mgiyqE~~Y~kyGKh~~EalFytH~L----sLP~Flf~~~div--~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~ 249 (330)
T KOG1583|consen 176 SAYMGIYQETTYQKYGKHWKEALFYTHFL----SLPLFLFMGDDIV--SHWRLAFKSESYLIPLLGFKVPSMWVYLLFNV 249 (330)
T ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHh----ccchHHHhcchHH--HHHHHHhcCcceeccccCccccHHHHHHHHHH
Confidence 88888888765554332333333333333 3454444333211 12322211 12356677788888
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhcccc
Q 039814 372 IFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQDL 442 (454)
Q Consensus 372 l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~~~ 442 (454)
+..|..--..|..-.++++++.++..++++.++.++|++.|.++++++.|+|.++++.|.++|.....+.+
T Consensus 250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~~ 320 (330)
T KOG1583|consen 250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHPK 320 (330)
T ss_pred HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 88888776777778999999999999999999999999999999999999999999999999987655433
No 33
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.16 E-value=1.7e-10 Score=98.48 Aligned_cols=119 Identities=13% Similarity=0.289 Sum_probs=96.7
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHhcccchhHH
Q 039814 161 VFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVA-HTIGHVAATVSMSKVAVSFT 239 (454)
Q Consensus 161 ~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll-~~l~~~~~~~al~~vs~s~a 239 (454)
...+++|...++++ |....++|+..+.+++.+....+..+....+.+.+...+..+++ ..++..+.+.++++++++.+
T Consensus 5 ~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 83 (126)
T PF00892_consen 5 IYSVFSKKLLKKIS-PLSITFWRFLIAGILLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV 83 (126)
T ss_pred eHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence 35578899999988 99999999988876322333333322233445556677777777 47888999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheee
Q 039814 240 HIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALA 280 (454)
Q Consensus 240 ~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~ 280 (454)
+++.+++|+++++++++++||++++++++|++++++|+.++
T Consensus 84 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 84 SILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998764
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.11 E-value=6.6e-10 Score=106.04 Aligned_cols=194 Identities=14% Similarity=0.098 Sum_probs=125.9
Q ss_pred cchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecC-------------------C--------c
Q 039814 234 VAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTE-------------------L--------N 286 (454)
Q Consensus 234 vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~-------------------~--------~ 286 (454)
++++.....++..++++++.++.+.++|++..++++.++...|+.....+| . .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 567778889999999999999999999999999999999999987422111 1 1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHH
Q 039814 287 FNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWW 366 (454)
Q Consensus 287 ~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ 366 (454)
..+.|....+.+.++.++..++.++..++++.....-.......+.+....... .+...... .+.. ........+..
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~-~~~~-~~~~~~~~~~~ 158 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLL-WSDGTLIS-NFGF-FIGYPTAVWIV 158 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHh-hcccchhh-ccCc-ccCCchHHHHH
Confidence 236777778888888889999999876654322110001111111111111111 11111000 0000 00011111122
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHH
Q 039814 367 VAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIY 434 (454)
Q Consensus 367 ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly 434 (454)
++.+++.+ .+..+++++.++.+.++...++++++.++|+++|||+++..+++|+.+++.|+++|
T Consensus 159 ~~~~a~~~----~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 159 GLLNVGGG----LCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHhcC----ceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 22222222 23456789999999999999999999999999999999999999999999998775
No 35
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.04 E-value=7.5e-11 Score=111.44 Aligned_cols=258 Identities=11% Similarity=0.107 Sum_probs=181.3
Q ss_pred HHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH
Q 039814 164 IYNKKVLNA-FPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHII 242 (454)
Q Consensus 164 i~nK~ll~~-fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii 242 (454)
+.+.++-+. .+-|..-+++..+.-.++.-.....|+ +. -+-.|+..+.+|+...-++++-..|.+|++....+.+
T Consensus 35 ~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~-~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lL 110 (336)
T KOG2766|consen 35 FTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR---KY-IKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLL 110 (336)
T ss_pred hhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh---HH-HHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHH
Confidence 444454443 566877777765443333222222222 11 2334777888888887777777789999999999999
Q ss_pred HhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCC--------cchHHHHHHHHHHHHHHHHHHHHHHhccC
Q 039814 243 KSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL--------NFNMIGFMGAMISNLAFVFRNIFSKKGMK 314 (454)
Q Consensus 243 ~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~--------~~~~~G~ll~lls~l~~A~~~Vl~kk~~~ 314 (454)
-.-..+.+++++|+|++.|+.+.++.|++++++|+.++...|. +....|+.++++++-+||..++..+.+.|
T Consensus 111 Dcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk 190 (336)
T KOG2766|consen 111 DCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK 190 (336)
T ss_pred HHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh
Confidence 8888888999999999999999999999999999998877552 23578999999999999999999888776
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHH
Q 039814 315 GKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFS 394 (454)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~s 394 (454)
+ .+...+++..+++|.++...- ++.|......-.|+.. +...+. ..++-|+..-..=..++..|++.++
T Consensus 191 n--~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~-------i~~yl~-f~L~MFllYsl~pil~k~~~aT~~n 259 (336)
T KOG2766|consen 191 N--ADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSA-------IFLYLR-FALTMFLLYSLAPILIKTNSATMFN 259 (336)
T ss_pred c--CcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHH-------HHHHHH-HHHHHHHHHHhhHHheecCCceEEE
Confidence 5 667777777777777765543 3344433222223211 111111 2222222221222457888998888
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhh
Q 039814 395 IGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFL 438 (454)
Q Consensus 395 v~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k 438 (454)
+........++++ ..||-+++|.-.+..+.+..|.++|+.+.
T Consensus 260 lslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re 301 (336)
T KOG2766|consen 260 LSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE 301 (336)
T ss_pred hhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence 8888888888887 78888899999999999999999996543
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.85 E-value=2.8e-08 Score=84.95 Aligned_cols=119 Identities=20% Similarity=0.260 Sum_probs=97.6
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHH-HHHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHH
Q 039814 162 FNIYNKKVLNAFPYPWLTSTLSLACGSLMML-VSWATRIAEAP-KTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFT 239 (454)
Q Consensus 162 ~~i~nK~ll~~fp~P~~lt~lr~~~a~l~ll-l~~~~~~~~~~-~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a 239 (454)
..++.|..+++.+ |.+-++.|-++..+++. +....+..+.+ ..+.+.|..+...|+...++-.+++.+++...+|..
T Consensus 18 ~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~V 96 (140)
T COG2510 18 TPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRV 96 (140)
T ss_pred HHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceE
Confidence 3468899999988 99999999776655543 33444433332 234455777778888888999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeee
Q 039814 240 HIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAA 281 (454)
Q Consensus 240 ~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~ 281 (454)
.-+-.++|+++++++++|+|||++.++|+|++++++|+.++.
T Consensus 97 vPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 97 VPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred EEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 999999999999999999999999999999999999998765
No 37
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.85 E-value=2e-08 Score=85.69 Aligned_cols=124 Identities=14% Similarity=0.171 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHHHH-HHHHH
Q 039814 300 LAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIF-YHLYN 378 (454)
Q Consensus 300 l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~-~~l~n 378 (454)
++|+.+.++.|+..++ .++.....+....+.+ +.+.....+.......++ ......+..+++ ....+
T Consensus 1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 68 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSP---------RQWLWLLFLGLLGTALAY 68 (126)
T ss_pred ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCCh---------hhhhhhhHhhccceehHH
Confidence 4688999999998776 6777777777766665 444444333321100011 111112222222 23444
Q ss_pred HHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHH
Q 039814 379 QVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYS 435 (454)
Q Consensus 379 ~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~ 435 (454)
...+..++++++...++...++|+++.++++++++|++++.+++|+++++.|+++.+
T Consensus 69 ~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 69 LLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 556678999999999999999999999999999999999999999999999998764
No 38
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.85 E-value=5.3e-07 Score=87.85 Aligned_cols=209 Identities=17% Similarity=0.212 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHH-hhhhHHHHHHHHHHhcccCChhhH----HHHHhHhhhheeeee
Q 039814 208 EFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIK-SGEPAFSVLVSRFLFGETLPMPVY----MSLLPIIGGCALAAV 282 (454)
Q Consensus 208 ~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~-s~~Pifv~lls~l~l~er~s~~~~----lsl~li~~Gv~l~~~ 282 (454)
..+...+..|++.++++...+.|++++.+|.+.=+. ...-+.+.+++.++++|.-+...+ ++++++++|+.+...
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 456667888899999999999999999888777554 667778999999999998776554 488899999998887
Q ss_pred cCCcc--------hHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHH
Q 039814 283 TELNF--------NMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQK 354 (454)
Q Consensus 283 ~~~~~--------~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~ 354 (454)
.|.+. ...|++..+++.+.|..|.++.|-. +.++......+++..++-...+..+.+.+......|.
T Consensus 123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~- 197 (269)
T PF06800_consen 123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWK- 197 (269)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcccccccccchHH-
Confidence 65321 2469999999999999999997753 2456655554443222221222221111111111222
Q ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchh----hHHhHHHHHHH
Q 039814 355 AIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPV----NALGAAIAILG 430 (454)
Q Consensus 355 ~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~----~ilG~~Lil~G 430 (454)
-+.+|++.-.-|.+.+...++.+..+.=.+.-+..+++.+.|+++++|.=+.. .++|.++++.|
T Consensus 198 ------------nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G 265 (269)
T PF06800_consen 198 ------------NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIG 265 (269)
T ss_pred ------------hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHh
Confidence 12344444445555666778899888888889999999999999999986655 56788888887
Q ss_pred HHH
Q 039814 431 TFI 433 (454)
Q Consensus 431 v~l 433 (454)
..+
T Consensus 266 ~il 268 (269)
T PF06800_consen 266 AIL 268 (269)
T ss_pred hhc
Confidence 653
No 39
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.83 E-value=1.3e-08 Score=86.91 Aligned_cols=76 Identities=24% Similarity=0.337 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCCc
Q 039814 210 WKSLFPVAVAHT-IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTELN 286 (454)
Q Consensus 210 ~~~ll~~gll~~-l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~~ 286 (454)
+..+...|++.. .+..++++|+++.+ +.+..+.+++|+|+++++++++|||++++++++++++++|++++..+|.+
T Consensus 34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 34 WLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 445566666664 77888999999999 58889999999999999999999999999999999999999998877654
No 40
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.80 E-value=2e-08 Score=85.76 Aligned_cols=135 Identities=18% Similarity=0.264 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHH
Q 039814 291 GFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQ 370 (454)
Q Consensus 291 G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~ 370 (454)
-.++++++++.+++..++.|-..++ +|+...+..-+.+...++..+.+. .++ |+.. ...++..+..++.+
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~--vdp~~At~IRtiVi~~~l~~v~~~-~g~------~~~~-~~~~~k~~lflilS 73 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEG--VDPDFATTIRTIVILIFLLIVLLV-TGN------WQAG-GEIGPKSWLFLILS 73 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc--cCccHHHHHHHHHHHHHHHHHHHh-cCc------eecc-cccCcceehhhhHH
Confidence 3678999999999999999988765 566555544444444444433332 221 1110 11233334456677
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHH
Q 039814 371 SIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYS 435 (454)
Q Consensus 371 ~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~ 435 (454)
|+..-+-.++.|++++.-.+....-..-..+++++++|++++||+++..+++|++++.+|..+.+
T Consensus 74 Gla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 74 GLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 87777777888899988777777777888899999999999999999999999999999987654
No 41
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.79 E-value=4.3e-08 Score=89.66 Aligned_cols=219 Identities=16% Similarity=0.217 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCC--cc
Q 039814 210 WKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL--NF 287 (454)
Q Consensus 210 ~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~--~~ 287 (454)
.+...|..++.++.++.+..+++.++++-++.+.++.-.|+.+++++.+|+|+..-++++.+++++|++++.+.|. ..
T Consensus 53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~ 132 (290)
T KOG4314|consen 53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD 132 (290)
T ss_pred eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence 4456788888888899999999999999999999999999999999999999999999999999999999987664 35
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHH-HHHHHHHHHHHHH-HH-HHHHhcchHHHHHhHHHHHH-hhchHH
Q 039814 288 NMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMN-YYACLSMMSLLIL-TP-FAIAVEGPQMWAAGWQKAIA-QIGPNF 363 (454)
Q Consensus 288 ~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~-~~~~~~~~~~lll-~P-~~l~~e~~~~~~~~~~~~~~-~~~~~~ 363 (454)
++.|+.++++|+...|+|.++.|+.....+..... ++.+...+-+.+. .| ..+.+.+.+ .|+.-.. .+++
T Consensus 133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE----~~qsFA~~PWG~-- 206 (290)
T KOG4314|consen 133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVE----HLQSFAAAPWGC-- 206 (290)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchH----HHHHHhhCCchh--
Confidence 78999999999999999999999987654444332 2222222222221 22 222233322 1221111 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhh
Q 039814 364 VWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 364 l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~ 437 (454)
+...+.....+|+.....+..+.|...|+...+.-..-.....++-+-..+...+.|..++..|..+.-..
T Consensus 207 ---l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP 277 (290)
T KOG4314|consen 207 ---LCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIP 277 (290)
T ss_pred ---hhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecc
Confidence 22222222334444444467778888887776666666677776666678889999999999998876544
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.63 E-value=2.7e-06 Score=84.80 Aligned_cols=141 Identities=13% Similarity=0.103 Sum_probs=102.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHH
Q 039814 286 NFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVW 365 (454)
Q Consensus 286 ~~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~ 365 (454)
+....|.+++++++++|+...++.|.. . ++++.....+-..++.+++.+..............+. ......
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~------~~~~~~ 74 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQ------TPQKIF 74 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHc------CHHHHH
Confidence 344679999999999999999999764 3 3778888877777777766665443221111000010 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHH
Q 039814 366 WVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYS 435 (454)
Q Consensus 366 ~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~ 435 (454)
..+..++....++.+.|+.++++++...++..++.|+++.++++++++|+++..+++|+++.++|+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 75 MLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 2223444444556677888999999999999999999999999999999999999999999999998764
No 43
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.56 E-value=2.9e-06 Score=82.34 Aligned_cols=117 Identities=17% Similarity=0.180 Sum_probs=88.2
Q ss_pred HHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHhcccchhH
Q 039814 161 VFNIYNKKVLNAFPY-PWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAH-TIGHVAATVSMSKVAVSF 238 (454)
Q Consensus 161 ~~~i~nK~ll~~fp~-P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~-~l~~~~~~~al~~vs~s~ 238 (454)
...++.|...++.+. +.....+++.++.+++........++. ..+.+.|..++..+++. .++..+++.++++.+++.
T Consensus 142 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 220 (260)
T TIGR00950 142 LGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSA 220 (260)
T ss_pred HHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchH
Confidence 345678998877652 334454677777666544333222222 22455566667677765 578888999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhhe
Q 039814 239 THIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCA 278 (454)
Q Consensus 239 a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~ 278 (454)
++++.+++|++++++++++++|+++..++.|.++++.|+.
T Consensus 221 ~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 221 ASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999973
No 44
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.52 E-value=6.2e-06 Score=80.24 Aligned_cols=141 Identities=10% Similarity=0.125 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHH
Q 039814 290 IGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAA 369 (454)
Q Consensus 290 ~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~ 369 (454)
.|.+++++++++|+...++.|. ..+ +++.....+-+.++.+++.+..............++.. ........+..
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~--~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 75 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKP--LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRI---QKRPLILSLLL 75 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hcc--CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCc---ccchHHHHHHH
Confidence 3889999999999999999997 333 78888777777777766665443222111000011100 00111222344
Q ss_pred HHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHh
Q 039814 370 QSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQ 436 (454)
Q Consensus 370 ~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~ 436 (454)
.+++....+.+.++.++++++..+++..++.|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus 76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 5555555566677889999999999999999999999999999999999999999999999886643
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.50 E-value=2.7e-06 Score=84.13 Aligned_cols=133 Identities=14% Similarity=0.168 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHH
Q 039814 292 FMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQS 371 (454)
Q Consensus 292 ~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~ 371 (454)
+++.+++++++|.+++..||..+++ ++...+ ....+.+++.|+.........|.. ........++..+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 70 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE--PDFLWW--ALLAHSVLLTPYGLWYLAQVGWSR--------LPATFWLLLAISA 70 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch--hHHHHH--HHHHHHHHHHHHHHHhcccCCCCC--------cchhhHHHHHHHH
Confidence 5678999999999999999876542 233322 233445566666543210000110 0001112233455
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHh
Q 039814 372 IFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQ 436 (454)
Q Consensus 372 l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~ 436 (454)
+....+..+.+..+++.++...+...+..|+++.+++++++||+++..+++|+++++.|+++...
T Consensus 71 ~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 71 VANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 55555666677789999999999999999999999999999999999999999999999988764
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.32 E-value=1.8e-05 Score=81.02 Aligned_cols=137 Identities=11% Similarity=0.178 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHH-HhHHHHHHhhchHHHHHHHH
Q 039814 291 GFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWA-AGWQKAIAQIGPNFVWWVAA 369 (454)
Q Consensus 291 G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~-~~~~~~~~~~~~~~l~~ll~ 369 (454)
-++.+++.-++|+...++.|..++ ..+++..+.++-..++.+++.|++...+...... ..|.+ +..+..
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~---------~~~l~l 83 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSI---------LSKIGL 83 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHH---------HHHHHH
Confidence 356677888999999999998874 4577777777777778888888876544311111 11221 112223
Q ss_pred HHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHH------hCCCCchhhHHhHHHHHHHHHHHHhh
Q 039814 370 QSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIII------FHTPVQPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 370 ~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~------fgE~lt~~~ilG~~Lil~Gv~ly~~~ 437 (454)
.|+++..++...+..++++++..+++..++.|+++.++++++ ++|+++..+++|+++.++|+.+....
T Consensus 84 ~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~ 157 (358)
T PLN00411 84 LGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY 157 (358)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence 344444455567778999999999999999999999999999 69999999999999999999876643
No 47
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.32 E-value=1.8e-05 Score=78.73 Aligned_cols=125 Identities=16% Similarity=0.206 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHH-HHHHHHHHH
Q 039814 151 YFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAH-TIGHVAATV 229 (454)
Q Consensus 151 ~~~lw~~~s~~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~-~l~~~~~~~ 229 (454)
...+.|+. ..+..|...++.+ |...+...++ +.+++......... ....+...|...+..|++. .+++.++++
T Consensus 155 ~aa~~~a~---~~v~~r~~~~~~~-~~~~~~~~~~-~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~ 228 (293)
T PRK10532 155 GAGACWAI---YILSGQRAGAEHG-PATVAIGSLI-AALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMI 228 (293)
T ss_pred HHHHHHHH---HHHHHHHHhccCC-chHHHHHHHH-HHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444 4456788877666 6665444443 33333322222111 1122344455556677765 567778899
Q ss_pred HhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeee
Q 039814 230 SMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAA 281 (454)
Q Consensus 230 al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~ 281 (454)
++++++++.++++..++|++.+++++++++|+++..+++|.+++++|++...
T Consensus 229 ~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 229 ALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987654
No 48
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.23 E-value=3.6e-05 Score=67.31 Aligned_cols=122 Identities=14% Similarity=0.081 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHH
Q 039814 290 IGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAA 369 (454)
Q Consensus 290 ~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~ 369 (454)
.|+++.+++.++-+..+++.|+.+++.+ ....... . ...+. . ..+. + ..++..+++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g--~~~~~~~-~-~~~~~----~-~~~p-------~--------~~i~lgl~~ 57 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP--LLSHAWD-F-IAALL----A-FGLA-------L--------RAVLLGLAG 57 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC--CccchhH-H-HHHHH----H-Hhcc-------H--------HHHHHHHHH
Confidence 4789999999999999999998876532 1111100 0 00000 0 0000 0 011122333
Q ss_pred HHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHH--HhCCCCchhhHHhHHHHHHHHHHHHhhhc
Q 039814 370 QSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSII--IFHTPVQPVNALGAAIAILGTFIYSQFLV 439 (454)
Q Consensus 370 ~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l--~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~ 439 (454)
.++.+++ +..++++.+...+.-...+.++.+.+.++. +|||++|+.+++|++++++|+++.++.++
T Consensus 58 ~~la~~~----w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 58 YALSMLC----WLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHH----HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 3333333 345689998888887777877777777774 89999999999999999999999886544
No 49
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.20 E-value=2.8e-05 Score=77.41 Aligned_cols=118 Identities=13% Similarity=0.089 Sum_probs=83.0
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHH
Q 039814 161 VFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTH 240 (454)
Q Consensus 161 ~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ 240 (454)
..++++|..-++.+ |..... ...+..+......... .....+.+.|..++..++...++..++++++++.+++.++
T Consensus 170 ~~~v~~k~~~~~~~-~~~~~~--~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s 245 (295)
T PRK11689 170 AYCNVTRKYARGKN-GITLFF--ILTALALWIKYFLSPQ-PAMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLA 245 (295)
T ss_pred HHHHHHhhccCCCC-chhHHH--HHHHHHHHHHHHHhcC-ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 44567788766654 554322 2222222222222221 1112344556556666655567788899999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeee
Q 039814 241 IIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAV 282 (454)
Q Consensus 241 ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~ 282 (454)
++.+++|++.+++++++++|+++..+++|.+++++|+.+...
T Consensus 246 ~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 246 TASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 999999999999999999999999999999999999876643
No 50
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.19 E-value=2.9e-05 Score=66.20 Aligned_cols=63 Identities=17% Similarity=0.177 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeee
Q 039814 219 AHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAA 281 (454)
Q Consensus 219 l~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~ 281 (454)
++.+..++...+++.++.+.+..+.++.++++++++++++||++++++++|+.++++|++++.
T Consensus 46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 346677888899999999999999999999999999999999999999999999999997654
No 51
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.15 E-value=4.5e-05 Score=75.87 Aligned_cols=118 Identities=16% Similarity=0.151 Sum_probs=86.4
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH-HHhhhcCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHhcccchhHHH
Q 039814 163 NIYNKKVLNAFPYPWLTSTLSLACGSLMMLVS-WATRIAEAPKTDLEFWKSLFPVAVAH-TIGHVAATVSMSKVAVSFTH 240 (454)
Q Consensus 163 ~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~-~~~~~~~~~~~~~~~~~~ll~~gll~-~l~~~~~~~al~~vs~s~a~ 240 (454)
.+.+|..-.. .+...+.+++.++.+.+.+. +..........+.+.|..++..+++. .++..++++++++++++.++
T Consensus 166 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s 243 (292)
T PRK11272 166 SVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT 243 (292)
T ss_pred HHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence 3456665432 34556677777766654433 22221111112345566677777765 57778899999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeee
Q 039814 241 IIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAV 282 (454)
Q Consensus 241 ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~ 282 (454)
++..++|++.+++++++++|+++..+++|.+++++|+.+...
T Consensus 244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999977644
No 52
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.01 E-value=0.0001 Score=73.67 Aligned_cols=63 Identities=21% Similarity=0.298 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeee
Q 039814 219 AHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAA 281 (454)
Q Consensus 219 l~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~ 281 (454)
.+.++..+...|+.+.|++..+-+.++.-++.++++.+++|||++++.+.|.++++.|+.++.
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 346677888899999999999999999999999999999999999999999999999997654
No 53
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.96 E-value=0.00025 Score=70.78 Aligned_cols=122 Identities=16% Similarity=0.113 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhcCCchH--HHHHHHHHHHHHHHH-HHHHhhhcC-----CCCCCHHHHHHHHHHHHHH-HHHHHHHHHHh
Q 039814 161 VFNIYNKKVLNAFPYPW--LTSTLSLACGSLMML-VSWATRIAE-----APKTDLEFWKSLFPVAVAH-TIGHVAATVSM 231 (454)
Q Consensus 161 ~~~i~nK~ll~~fp~P~--~lt~lr~~~a~l~ll-l~~~~~~~~-----~~~~~~~~~~~ll~~gll~-~l~~~~~~~al 231 (454)
...++.|...++.+.|. ....+..+.+.+.+. ......... ....+.+.|..++..+++. .++..+++.++
T Consensus 157 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l 236 (299)
T PRK11453 157 CGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLL 236 (299)
T ss_pred HHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34457777766554333 333444444433322 222221110 1123445566777777765 46778889999
Q ss_pred cccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeee
Q 039814 232 SKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAV 282 (454)
Q Consensus 232 ~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~ 282 (454)
++.+++.+.++..++|++.++++++++||+++..+++|.+++++|+.+...
T Consensus 237 ~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 237 GRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999977643
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.88 E-value=0.00013 Score=72.73 Aligned_cols=124 Identities=13% Similarity=0.090 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHH-HHhhhcCCCC---------CC-HHHHHHHHHHHH-HHHH
Q 039814 157 ALNVVFNIYNKKVLN--AFPYPWLTSTLSLACGSLMMLVS-WATRIAEAPK---------TD-LEFWKSLFPVAV-AHTI 222 (454)
Q Consensus 157 ~~s~~~~i~nK~ll~--~fp~P~~lt~lr~~~a~l~lll~-~~~~~~~~~~---------~~-~~~~~~ll~~gl-l~~l 222 (454)
.++....++.|...+ +++ |+.++.++...+.+++++. .......... .. ...+...+..++ .+..
T Consensus 155 ~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (302)
T TIGR00817 155 ITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHF 233 (302)
T ss_pred HHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHH
Confidence 334445678888887 565 8888888887776665443 2222111000 00 011111222222 2233
Q ss_pred HHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeee
Q 039814 223 GHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAA 281 (454)
Q Consensus 223 ~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~ 281 (454)
.+.+.+.+++++++..+++...++|+++++++++++||+++..+++|.+++++|+.+..
T Consensus 234 ~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 234 YQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 33556689999999999999999999999999999999999999999999999997754
No 55
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.81 E-value=0.0011 Score=58.96 Aligned_cols=125 Identities=13% Similarity=0.103 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHhc------CCchHHHHHHHHHHHHHHHHHH-HHhhhcCC-------CC--C--CHHHHHHHHHHH
Q 039814 156 WALNVVFNIYNKKVLNA------FPYPWLTSTLSLACGSLMMLVS-WATRIAEA-------PK--T--DLEFWKSLFPVA 217 (454)
Q Consensus 156 ~~~s~~~~i~nK~ll~~------fp~P~~lt~lr~~~a~l~lll~-~~~~~~~~-------~~--~--~~~~~~~ll~~g 217 (454)
-.+.....++.|..+++ -..|+.+....-..+.+++++. ...+..+. .. . +.+.+..++..|
T Consensus 9 ~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (153)
T PF03151_consen 9 SLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSG 88 (153)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHH
Confidence 34444555677888776 2246666666545554444332 22222110 00 0 224455666777
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheee
Q 039814 218 VAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALA 280 (454)
Q Consensus 218 ll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~ 280 (454)
++....++..+..++++++-+.+++....-+++.+++.++++|+++..+++|++++++|+.+-
T Consensus 89 ~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 89 LLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 777788888999999999999999999999999999999999999999999999999998764
No 56
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.67 E-value=0.0023 Score=54.32 Aligned_cols=62 Identities=11% Similarity=0.141 Sum_probs=53.0
Q ss_pred HHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhc
Q 039814 377 YNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLV 439 (454)
Q Consensus 377 ~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~ 439 (454)
.+...+..+++.++ ..+....+.|+++.++|+++|+|+++..+++|++++++|+.+......
T Consensus 48 ~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 48 AYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 33445566788885 777888899999999999999999999999999999999999887553
No 57
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.65 E-value=0.027 Score=57.24 Aligned_cols=230 Identities=14% Similarity=0.050 Sum_probs=136.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH-HhhhhHHHHHHHHHHhcccC---C----hhhHHHHHhHhhhh
Q 039814 206 DLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHII-KSGEPAFSVLVSRFLFGETL---P----MPVYMSLLPIIGGC 277 (454)
Q Consensus 206 ~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii-~s~~Pifv~lls~l~l~er~---s----~~~~lsl~li~~Gv 277 (454)
+...+...+..|++..+++.....+++++.+|.+.-+ ..++-++..++..++++|-. + ....+|++++++|+
T Consensus 69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi 148 (345)
T PRK13499 69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV 148 (345)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence 3445666778888889999999999999999988755 57788889999999988643 2 35778889999999
Q ss_pred eeeee----cCC--------cc-hHHHHHHHHHHHHHHHHHHHHHHhcc--C----CCCCchHHHHHHH---HHHHHHHH
Q 039814 278 ALAAV----TEL--------NF-NMIGFMGAMISNLAFVFRNIFSKKGM--K----GKSVGGMNYYACL---SMMSLLIL 335 (454)
Q Consensus 278 ~l~~~----~~~--------~~-~~~G~ll~lls~l~~A~~~Vl~kk~~--~----~~~~~~l~~~~~~---~~~~~lll 335 (454)
++... .|. ++ ...|++.++++.+.+++|.......+ . ....++....... .+++.++.
T Consensus 149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~ 228 (345)
T PRK13499 149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAIT 228 (345)
T ss_pred HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHH
Confidence 88776 332 12 35799999999999999994332221 1 1123333222221 22333322
Q ss_pred HHHHHHh---cchHHH-HHhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHH----HHHHHHHHHHHHH
Q 039814 336 TPFAIAV---EGPQMW-AAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFS----IGNTMKRISVIVS 407 (454)
Q Consensus 336 ~P~~l~~---e~~~~~-~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~s----v~~~lkpV~~ill 407 (454)
-...-.. ...... ..+....-.....+. ...+..|+.-+..+.+.++.-++.+..... +..-+.-+++.+.
T Consensus 229 n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~-l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw 307 (345)
T PRK13499 229 NLGFCFIRLAKNKDLSLKADFSLAKPLLITNV-LLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW 307 (345)
T ss_pred HHHHHHHHHhhCCCcccchhccccchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence 2211110 100000 000000000000111 112334555445555555555666433222 3335556888888
Q ss_pred HHHHhCCCCc------hhhHHhHHHHHHHHHHHHhh
Q 039814 408 SIIIFHTPVQ------PVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 408 s~l~fgE~lt------~~~ilG~~Lil~Gv~ly~~~ 437 (454)
|+ +++|.=+ ...++|.++++.|..+....
T Consensus 308 Gi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 308 GL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred hh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 88 5999766 67899999999998876654
No 58
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.63 E-value=0.0019 Score=66.14 Aligned_cols=121 Identities=10% Similarity=0.006 Sum_probs=82.2
Q ss_pred HHHHHHHHhccCCCCCc-hHHHHHHHHHHHHHHHHHHHHHh--cchHHHHHhHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 039814 303 VFRNIFSKKGMKGKSVG-GMNYYACLSMMSLLILTPFAIAV--EGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQ 379 (454)
Q Consensus 303 A~~~Vl~kk~~~~~~~~-~l~~~~~~~~~~~lll~P~~l~~--e~~~~~~~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~ 379 (454)
..++++.|..++. .+ |+.+..+...++.+++..++... ..++.. .+.. .+..++..|+++...+.
T Consensus 62 ~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~--------~~~~llp~gl~~~~~~~ 129 (350)
T PTZ00343 62 VLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK--SLKL--------FLKNFLPQGLCHLFVHF 129 (350)
T ss_pred HHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--CHHH--------HHHHHHHHHHHHHHHHH
Confidence 4456777887765 45 77777766666655444333211 111110 0110 11123344444444444
Q ss_pred HHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHH
Q 039814 380 VSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYS 435 (454)
Q Consensus 380 ~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~ 435 (454)
..+..++++++..+++...+.|++++++++++++|+++..+++|.+++++|+.+..
T Consensus 130 ~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 130 GAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 45567899999999999999999999999999999999999999999999998765
No 59
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.61 E-value=0.002 Score=62.70 Aligned_cols=118 Identities=18% Similarity=0.246 Sum_probs=84.1
Q ss_pred HHHHHHHHHHhcCCchHHHHH-HHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHhcccchhH
Q 039814 161 VFNIYNKKVLNAFPYPWLTST-LSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHT-IGHVAATVSMSKVAVSF 238 (454)
Q Consensus 161 ~~~i~nK~ll~~fp~P~~lt~-lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~-l~~~~~~~al~~vs~s~ 238 (454)
...+.+|... +.+ +..... +++....++. ......... .......+..+...+++.. .++.+.+.+++..+++.
T Consensus 168 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~ 243 (292)
T COG0697 168 LYTALVKRLS-RLG-PVTLALLLQLLLALLLL-LLFFLSGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASL 243 (292)
T ss_pred HHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHH-HHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 3446677776 433 444444 4444222222 222222111 2234455777778888776 58889999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeee
Q 039814 239 THIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAV 282 (454)
Q Consensus 239 a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~ 282 (454)
.+.+..++|++.+++++++++|+++..+++|.++++.|+.+...
T Consensus 244 ~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~ 287 (292)
T COG0697 244 VALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL 287 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999987653
No 60
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.56 E-value=0.00094 Score=66.50 Aligned_cols=125 Identities=13% Similarity=0.089 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH----HHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHH
Q 039814 146 LKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLA----CGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAHT 221 (454)
Q Consensus 146 ~~l~~~~~lw~~~s~~~~i~nK~ll~~fp~P~~lt~lr~~----~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~~ 221 (454)
...++...+-|++ +.+..|.. +++ |...++.+.. .+.++.... + +..|...+..+ ..+..|++..
T Consensus 154 i~~~l~sg~~y~~---~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~--~--~~~~~~~~~~~-~~~~~Gi~~~ 222 (290)
T TIGR00776 154 ILLLLMSTIGYLV---YVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH--I--LAKPLKKYAIL-LNILPGLMWG 222 (290)
T ss_pred HHHHHHHHHHHHH---HHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHH--h--cccchHHHHHH-HHHHHHHHHH
Confidence 3344444444443 33566765 344 7766444433 344333222 1 11222233333 3445888888
Q ss_pred HHHHHHHHHhc-ccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhH----HHHHhHhhhheeee
Q 039814 222 IGHVAATVSMS-KVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVY----MSLLPIIGGCALAA 281 (454)
Q Consensus 222 l~~~~~~~al~-~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~----lsl~li~~Gv~l~~ 281 (454)
+++.++..+.+ +.+++.+.++.+.+|+...+.+.+++||+.+++++ +|.+++++|+.+..
T Consensus 223 ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 223 IGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 88888889999 99999999999999999999999999999999999 99999999987764
No 61
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.54 E-value=0.0042 Score=60.83 Aligned_cols=140 Identities=11% Similarity=0.107 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHH
Q 039814 289 MIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVA 368 (454)
Q Consensus 289 ~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll 368 (454)
..|+++++.|-+.|+.--.+.|-+. +.++....+.-.+.+..++.......... ..-++ . ...+..+....
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~---~~~~~-~--~~~p~~~~~~~ 76 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQW---RELKQ-L--LKQPKTLLMLA 76 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhh---HHHHH-H--HhCcHHHHHHH
Confidence 4699999999999998888887653 25666666655555544433222222211 11111 1 12233333333
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhh
Q 039814 369 AQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 369 ~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~ 437 (454)
.+++.-..-.....++...-....+|...+++|.+.+++|.++++|+++..|++..+++.+|+..-.+.
T Consensus 77 l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 77 LTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 333333222223335678888999999999999999999999999999999999999999999865443
No 62
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.46 E-value=0.0015 Score=55.64 Aligned_cols=55 Identities=20% Similarity=0.275 Sum_probs=48.4
Q ss_pred HHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHh
Q 039814 382 YMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQ 436 (454)
Q Consensus 382 f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~ 436 (454)
..++++++...+.....+.++.+.++|+++|||++++.+++|++++++|+.+...
T Consensus 55 ~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 55 LLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3457888888877777799999999999999999999999999999999987653
No 63
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.34 E-value=0.00096 Score=58.38 Aligned_cols=70 Identities=14% Similarity=0.128 Sum_probs=60.1
Q ss_pred HHHHH-HHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHH--HhcccCChhhHHHHHhHhhhheeeeec
Q 039814 214 FPVAV-AHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF--LFGETLPMPVYMSLLPIIGGCALAAVT 283 (454)
Q Consensus 214 l~~gl-l~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l--~l~er~s~~~~lsl~li~~Gv~l~~~~ 283 (454)
+..|+ ++.+..++.+.+++..+++.+.-+.+..++++++.++. +++|++++.+++|++++++|+.++..+
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 33444 45677888899999999999999999999889888885 899999999999999999999887643
No 64
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.26 E-value=0.0058 Score=58.66 Aligned_cols=123 Identities=15% Similarity=0.151 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHhc
Q 039814 154 TWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLFPVAVAH-TIGHVAATVSMS 232 (454)
Q Consensus 154 lw~~~s~~~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll~~gll~-~l~~~~~~~al~ 232 (454)
.-.+++..+++..|.+=+.-+-+-.+ ..-+.++.++.+....... ...-.+.+....-+.++++. .+-..+...++.
T Consensus 155 ~AG~~Wa~YIv~G~r~g~~~~g~~g~-a~gm~vAaviv~Pig~~~a-g~~l~~p~ll~laLgvavlSSalPYsLEmiAL~ 232 (292)
T COG5006 155 GAGACWALYIVLGQRAGRAEHGTAGV-AVGMLVAALIVLPIGAAQA-GPALFSPSLLPLALGVAVLSSALPYSLEMIALR 232 (292)
T ss_pred HHhHHHHHHHHHcchhcccCCCchHH-HHHHHHHHHHHhhhhhhhc-chhhcChHHHHHHHHHHHHhcccchHHHHHHHh
Confidence 33445555666767776544434333 3445555444444332211 11112333333344555554 466677889999
Q ss_pred ccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhhe
Q 039814 233 KVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCA 278 (454)
Q Consensus 233 ~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~ 278 (454)
..+...+.++.+++|.+.++.++++++|+++..+|+++..++.+.+
T Consensus 233 rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 233 RLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred hCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999988765
No 65
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.24 E-value=0.0055 Score=61.26 Aligned_cols=72 Identities=19% Similarity=0.210 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhcccc
Q 039814 371 SIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQDL 442 (454)
Q Consensus 371 ~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~~~ 442 (454)
+++.++.....+.++++++..+..+.-..+++.+++++++++|++.+..+++|.+++.+|+.+....+.++.
T Consensus 71 ~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~ 142 (303)
T PF08449_consen 71 SFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS 142 (303)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence 444555556667789999999999999999999999999999999999999999999999999887765433
No 66
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.01 E-value=0.0066 Score=52.37 Aligned_cols=69 Identities=19% Similarity=0.251 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHHH-hhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeee
Q 039814 214 FPVAVAHTIGHVAATVSMSKVAVSFTHIIK-SGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAV 282 (454)
Q Consensus 214 l~~gll~~l~~~~~~~al~~vs~s~a~ii~-s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~ 282 (454)
+...+++.++.++...++++++.+.+-.+- ...-+.+++++.++++|++++.+++++.++++|+..+-.
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 444555667778888999999999988774 688999999999999999999999999999999987644
No 67
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.96 E-value=0.0038 Score=60.66 Aligned_cols=75 Identities=16% Similarity=0.305 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhccc
Q 039814 367 VAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQD 441 (454)
Q Consensus 367 ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~~ 441 (454)
...-++++...|...|..+++++|.++.+....|.+++.++++++++.+++..||++..+.++|+.+........
T Consensus 20 ~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 20 LAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 445677788899999999999999999999999999999999999999999999999999999999987765443
No 68
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.86 E-value=0.0058 Score=60.59 Aligned_cols=64 Identities=13% Similarity=0.203 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeee
Q 039814 219 AHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAV 282 (454)
Q Consensus 219 l~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~ 282 (454)
.+..|..+.+.|+.+.|++..+-+-++.-++.++++..+++|++++...+|.+++++|-.+++.
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 3466777888899999999999999999999999999999999999999999999999876654
No 69
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.76 E-value=0.014 Score=49.62 Aligned_cols=68 Identities=13% Similarity=0.217 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHH-HhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeee
Q 039814 215 PVAVAHTIGHVAATVSMSKVAVSFTHII-KSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAV 282 (454)
Q Consensus 215 ~~gll~~l~~~~~~~al~~vs~s~a~ii-~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~ 282 (454)
..-+++.+...+...+++.+|.+.+..+ ....-+.+++.++++++|++++.+++++.++++|+.+...
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3344456666777889999999998877 4578889999999999999999999999999999987643
No 70
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.76 E-value=0.00057 Score=65.19 Aligned_cols=219 Identities=14% Similarity=0.144 Sum_probs=137.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHH-hhhhHHHHHHHHHHhcccCChhh----HHHHHhHhhhh
Q 039814 203 PKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIK-SGEPAFSVLVSRFLFGETLPMPV----YMSLLPIIGGC 277 (454)
Q Consensus 203 ~~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~-s~~Pifv~lls~l~l~er~s~~~----~lsl~li~~Gv 277 (454)
|..+...+..-+..|++...++...+-|++++.+|-+.=+. ...-+-+.+++.+.++|-.+..+ ..++++++.|+
T Consensus 52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~ 131 (288)
T COG4975 52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGI 131 (288)
T ss_pred CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhh
Confidence 33344545556777788889999999999999888776443 45567778889999999877543 46788899999
Q ss_pred eeeeecCCc--------chHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHH
Q 039814 278 ALAAVTELN--------FNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWA 349 (454)
Q Consensus 278 ~l~~~~~~~--------~~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~ 349 (454)
.+....|.+ .--.|+...+.|.+.|..|.++.+-. +++.++....+++...+..+.+...-+......
T Consensus 132 ~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqAiGMv~~ali~~~~~~~~~~~K 207 (288)
T COG4975 132 YLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQAIGMVIGALILGFFKMEKRFNK 207 (288)
T ss_pred eEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHHHHHHHHHHHHhhcccccchHH
Confidence 999877631 11368888888999999998887643 245554443333222111111122121122222
Q ss_pred HhHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhh----HHhHH
Q 039814 350 AGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVN----ALGAA 425 (454)
Q Consensus 350 ~~~~~~~~~~~~~~l~~ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~----ilG~~ 425 (454)
..|.+ +..|+.-..-|.+.+.+-++.+-.+.=.+.-+--+++.+-|+++++|+=|..+ ++|++
T Consensus 208 ~t~~n-------------ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGii 274 (288)
T COG4975 208 YTWLN-------------IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGII 274 (288)
T ss_pred HHHHH-------------HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHH
Confidence 23322 12223222334444445555555444444455567788899999999987765 56788
Q ss_pred HHHHHHHHHHhhh
Q 039814 426 IAILGTFIYSQFL 438 (454)
Q Consensus 426 Lil~Gv~ly~~~k 438 (454)
+++.|..+....|
T Consensus 275 livvgai~lg~~K 287 (288)
T COG4975 275 LIVVGAILLGIAK 287 (288)
T ss_pred HHHHHhhhhheec
Confidence 8888877655433
No 71
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.71 E-value=0.021 Score=48.13 Aligned_cols=68 Identities=15% Similarity=0.102 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHHH-hhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeee
Q 039814 214 FPVAVAHTIGHVAATVSMSKVAVSFTHIIK-SGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAA 281 (454)
Q Consensus 214 l~~gll~~l~~~~~~~al~~vs~s~a~ii~-s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~ 281 (454)
+..-+++..+.++...+++.+|.+.+-.+= ..--+.+++.+++++||++++.+++++.++++|++..-
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 344455566777778999999999877664 57788999999999999999999999999999998653
No 72
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.68 E-value=0.03 Score=47.52 Aligned_cols=68 Identities=15% Similarity=0.168 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhHHHHH-HhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheee
Q 039814 213 LFPVAVAHTIGHVAATVSMSKVAVSFTHII-KSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALA 280 (454)
Q Consensus 213 ll~~gll~~l~~~~~~~al~~vs~s~a~ii-~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~ 280 (454)
.....+++.++.++...+++++|++.+-.+ ....-+.+++.+.+++||++++.+++++.++++|+...
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 334444556667777899999999987765 45778889999999999999999999999999999764
No 73
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.59 E-value=0.052 Score=55.09 Aligned_cols=68 Identities=15% Similarity=0.101 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhh
Q 039814 371 SIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFL 438 (454)
Q Consensus 371 ~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k 438 (454)
+++-...|+....+.++++.+...+.....-++++++|+++++++.++.+++|+++.++|+.+.....
T Consensus 86 a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 86 ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 56666678888888999999999999999999999999999999999999999999999998776554
No 74
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.51 E-value=0.035 Score=47.89 Aligned_cols=55 Identities=9% Similarity=0.257 Sum_probs=44.7
Q ss_pred Hhhhhch-HHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhh
Q 039814 384 SLDQISP-LTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFL 438 (454)
Q Consensus 384 ~l~~isp-~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k 438 (454)
++++++- ..+++..-+--+.+.+.|+++|||++++.+++|+++++.|+...+...
T Consensus 50 al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 50 AVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 3555543 345566667788889999999999999999999999999999987654
No 75
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.41 E-value=0.024 Score=47.59 Aligned_cols=68 Identities=18% Similarity=0.228 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHH-HhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeee
Q 039814 214 FPVAVAHTIGHVAATVSMSKVAVSFTHII-KSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAA 281 (454)
Q Consensus 214 l~~gll~~l~~~~~~~al~~vs~s~a~ii-~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~ 281 (454)
+..-+++..+..+...++++++++.+-.+ ...--+.+++.++++++|+.+..+++++.++++|+...-
T Consensus 34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence 34444455666777899999999887655 566788899999999999999999999999999997654
No 76
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.36 E-value=0.046 Score=46.45 Aligned_cols=55 Identities=13% Similarity=0.211 Sum_probs=45.6
Q ss_pred Hhhhhch-HHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhh
Q 039814 384 SLDQISP-LTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFL 438 (454)
Q Consensus 384 ~l~~isp-~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k 438 (454)
++++++- ..+++..-+-.+.+.+.|+++|||++++.+++|+++++.|+...+...
T Consensus 50 al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 50 TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 4566543 445666777888899999999999999999999999999999987654
No 77
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.33 E-value=0.17 Score=51.58 Aligned_cols=140 Identities=16% Similarity=0.114 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHH-HhcchHHHHHhHHHHHHhhchHHHHHH
Q 039814 289 MIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAI-AVEGPQMWAAGWQKAIAQIGPNFVWWV 367 (454)
Q Consensus 289 ~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l-~~e~~~~~~~~~~~~~~~~~~~~l~~l 367 (454)
..|+++++++++|++.+.+-.|| .++-+...+ .....++. -++.|+.. ....+.+ .+.+.+.++..+...
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~w~wE~~--W~v~gi~~-wl~~~~~~g~~~~~~f-----~~~~~~~~~~~~~~~ 76 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VKKWSWETM--WSVGGIFS-WLILPWLIAALLLPDF-----WAYYSSFSGSTLLPV 76 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cCCCchhHH--HHHHHHHH-HHHHHHHHHHHHhhhH-----HHHHHhcCHHHHHHH
Confidence 57999999999999999998888 343332232 21222222 22333222 1111211 111222333344444
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchH-HHHHHHHHHHHHHHHHHHHHhCCCC-------chhhHHhHHHHHHHHHHHHhh
Q 039814 368 AAQSIFYHLYNQVSYMSLDQISPL-TFSIGNTMKRISVIVSSIIIFHTPV-------QPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 368 l~~~l~~~l~n~~~f~~l~~isp~-t~sv~~~lkpV~~ills~l~fgE~l-------t~~~ilG~~Lil~Gv~ly~~~ 437 (454)
+.+|++--.-|...+..+++++-. +..+..-+.-+.+.+++.+++||=- ....++|.+++++|+.+..+.
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A 154 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA 154 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 555555555566667777877644 4556777888999999999998632 244788999999999999884
No 78
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.25 E-value=0.12 Score=45.64 Aligned_cols=117 Identities=15% Similarity=0.201 Sum_probs=81.3
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhc-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHH
Q 039814 162 FNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIA-EAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTH 240 (454)
Q Consensus 162 ~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~-~~~~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ 240 (454)
....|-.+-+....|+.-++.-+..+.+.+.+.+...++ ..+... +..++....|+++.....+..+....+.++.+.
T Consensus 16 q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~~~ 94 (138)
T PF04657_consen 16 QAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLGVFFVLSNIILVPRLGAALTT 94 (138)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 334555555555569999999999888876554433322 222211 112334558888888888888999998888777
Q ss_pred HHH-hhhhHHHHHHHHH----HhcccCChhhHHHHHhHhhhhee
Q 039814 241 IIK-SGEPAFSVLVSRF----LFGETLPMPVYMSLLPIIGGCAL 279 (454)
Q Consensus 241 ii~-s~~Pifv~lls~l----~l~er~s~~~~lsl~li~~Gv~l 279 (454)
++. ..+-+..++++.+ .-++++++.+++|++++++|+.+
T Consensus 95 ~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 95 ILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 654 5667777888876 34578999999999999999864
No 79
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.17 E-value=0.12 Score=43.55 Aligned_cols=54 Identities=15% Similarity=0.298 Sum_probs=46.9
Q ss_pred Hhhhhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhh
Q 039814 384 SLDQIS-PLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 384 ~l~~is-p~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~ 437 (454)
++++++ .+.+++..-+-.+.+.+.|+++|||++++.+++|+.++++|+...+..
T Consensus 50 alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 50 ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 456664 456788888999999999999999999999999999999999987764
No 80
>PRK11431 multidrug efflux system protein; Provisional
Probab=95.89 E-value=0.1 Score=43.99 Aligned_cols=53 Identities=9% Similarity=0.298 Sum_probs=45.4
Q ss_pred Hhhhhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHh
Q 039814 384 SLDQIS-PLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQ 436 (454)
Q Consensus 384 ~l~~is-p~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~ 436 (454)
++++++ .+.+++..-+-.+.+.+.|+++|||++++.+++|+.+++.|+...+.
T Consensus 49 al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 49 AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 356554 45677888888999999999999999999999999999999988754
No 81
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.86 E-value=0.072 Score=43.73 Aligned_cols=56 Identities=20% Similarity=0.298 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHH-HhhhhHHHHHHHHHHhcccCChhhHHHHHhH
Q 039814 218 VAHTIGHVAATVSMSKVAVSFTHII-KSGEPAFSVLVSRFLFGETLPMPVYMSLLPI 273 (454)
Q Consensus 218 ll~~l~~~~~~~al~~vs~s~a~ii-~s~~Pifv~lls~l~l~er~s~~~~lsl~li 273 (454)
.++.++..+...++++++.+.+--+ ..+..+.+.+.+.+++||+++..+++++.++
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3566777888899999999998655 5689999999999999999999999999864
No 82
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=95.80 E-value=0.11 Score=44.08 Aligned_cols=52 Identities=10% Similarity=0.275 Sum_probs=44.0
Q ss_pred Hhhhhc-hHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHH
Q 039814 384 SLDQIS-PLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYS 435 (454)
Q Consensus 384 ~l~~is-p~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~ 435 (454)
++++++ .+.+++..-+-.+.+.+.|+++|||++++.+++|+++++.|+...+
T Consensus 55 al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 55 AVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 355554 3456778888889999999999999999999999999999998764
No 83
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.74 E-value=0.56 Score=47.42 Aligned_cols=70 Identities=16% Similarity=0.387 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHh
Q 039814 367 VAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQ 436 (454)
Q Consensus 367 ll~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~ 436 (454)
+..-+++|...|...|..+++.+|.++.+...+|-..+.++++++++++++..||...++.+.|+.+.+.
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~ 164 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL 164 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 3445677888888889999999999999999999999999999999999999999999999999999883
No 84
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.49 E-value=0.042 Score=46.80 Aligned_cols=70 Identities=21% Similarity=0.279 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH-HhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheee
Q 039814 210 WKSLFPVAVAHTIGHVAATVSMSKVAVSFTHII-KSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALA 280 (454)
Q Consensus 210 ~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii-~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~ 280 (454)
|+..+|..+-. .+.+.+++.+...+.|.+.-+ .++.=+||++.++++.+|..+++.++|+++++.|+.+.
T Consensus 42 ~~y~ipf~lNq-~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFLLNQ-SGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 45555555444 445667788999999999887 59999999999988888888999999999999999875
No 85
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=95.36 E-value=0.23 Score=48.76 Aligned_cols=72 Identities=21% Similarity=0.242 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhH----HHHHhHhhhhee
Q 039814 207 LEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVY----MSLLPIIGGCAL 279 (454)
Q Consensus 207 ~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~----lsl~li~~Gv~l 279 (454)
++.|+ -+..|+++.+++.++..+.+...++.+-.+..+.++...+.+.+++||+=+++++ +|++++++|.++
T Consensus 193 k~~~~-nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 193 KKSWK-NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred cchHH-hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 34344 4678888999999999999999999999999999999999999999998777654 456666666543
No 86
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=94.99 E-value=0.078 Score=51.71 Aligned_cols=132 Identities=15% Similarity=0.205 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHH
Q 039814 291 GFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQ 370 (454)
Q Consensus 291 G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~ 370 (454)
|++.++.|+++|+..-+=.||.-. -|++.++.+++....+.-....++.+.+.+++ +...+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~---gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~p----------------~amlg 61 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT---GDGFFFQWVMCSGIFLVGLVVNLILGFPPFYP----------------WAMLG 61 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC---CCcHHHHHHHHHHHHHHHHHHHHhcCCCccee----------------HHHhh
Confidence 677889999999988888887533 46766665555433332232233333333211 11223
Q ss_pred HHHHHHHHHHHHHHhhhhc-hHHHHHHHHHHHHHHHHHHHH-HhCCC-----CchhhHHhHHHHHHHHHHHHhhhccc
Q 039814 371 SIFYHLYNQVSYMSLDQIS-PLTFSIGNTMKRISVIVSSII-IFHTP-----VQPVNALGAAIAILGTFIYSQFLVQD 441 (454)
Q Consensus 371 ~l~~~l~n~~~f~~l~~is-p~t~sv~~~lkpV~~ills~l-~fgE~-----lt~~~ilG~~Lil~Gv~ly~~~k~~~ 441 (454)
|.+-..-|....-+++.++ ++-..+.+...-+.+...|-+ +||++ -.+.+.+|++++++|..++...|..+
T Consensus 62 G~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 62 GALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 3332233333333444443 233344555556666666644 67654 45679999999999999998776544
No 87
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=94.97 E-value=0.0059 Score=59.05 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhh
Q 039814 372 IFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFL 438 (454)
Q Consensus 372 l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k 438 (454)
+.++..-+..|+++.+.+-.-+.+.+...|+++++++|++++|+.|....+|..+.+.|+.+..+..
T Consensus 105 ~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 105 FMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 3333333445667788888888899999999999999999999999999999999999998876543
No 88
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=94.70 E-value=0.94 Score=40.02 Aligned_cols=131 Identities=13% Similarity=0.224 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHHHHH
Q 039814 292 FMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQS 371 (454)
Q Consensus 292 ~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll~~~ 371 (454)
.++++++.+.-+.+..+..++-+... +++.........+.+.+....++.+.+.. . .+. . .-++...+|
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~~~-~-~~~----~----~p~w~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRPSL-A-SLS----S----VPWWAYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccccc-c-hhc----c----CChHHhccH
Confidence 45677777777888777666543311 25544444455555555544444443311 1 110 0 112333466
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHHHHH-HHHHHHHHH-HhC---CCCchhhHHhHHHHHHHHHH
Q 039814 372 IFYHLYNQVSYMSLDQISPLTFSIGNTMKR-ISVIVSSII-IFH---TPVQPVNALGAAIAILGTFI 433 (454)
Q Consensus 372 l~~~l~n~~~f~~l~~isp~t~sv~~~lkp-V~~ills~l-~fg---E~lt~~~ilG~~Lil~Gv~l 433 (454)
+++..+-......+.++++..+.+....-. +.+.+++.+ +|| +++++..++|.++++.|+++
T Consensus 72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 666666666667789999988877655444 445556654 333 57999999999999999864
No 89
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.57 E-value=0.35 Score=45.88 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhhee
Q 039814 214 FPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCAL 279 (454)
Q Consensus 214 l~~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l 279 (454)
....+..+++..+..+.+++.+.....+...+.++++.+++.++++|+++...++|+.+++.|+.+
T Consensus 156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 344455556666778889999999999999999999999999999999999999999999999764
No 90
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=93.67 E-value=0.45 Score=47.69 Aligned_cols=117 Identities=15% Similarity=0.227 Sum_probs=70.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHH
Q 039814 288 NMIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWV 367 (454)
Q Consensus 288 ~~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~l 367 (454)
...|..+++.++++.+....++||...+.+-....-- .. +... ...+ . | |..
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--~~--------~~~~-l~~~-~----W------------~~G 56 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--SG--------GRSY-LRRP-L----W------------WIG 56 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--ch--------hhHH-HhhH-H----H------------HHH
Confidence 4689999999999999999999986443221111100 00 0000 0000 0 1 000
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHH
Q 039814 368 AAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYS 435 (454)
Q Consensus 368 l~~~l~~~l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~ 435 (454)
+..-..+-..+ +.++...+....+-.+.+.-++..+++..++||+++...++|+++++.|..+.-
T Consensus 57 ~~~~~~g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 57 LLLMVLGEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHHHhcchHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 00001111122 223455555556666667778999999999999999999999999999987654
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=93.24 E-value=0.4 Score=39.30 Aligned_cols=44 Identities=11% Similarity=0.279 Sum_probs=24.4
Q ss_pred HhhhhchHH-HHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHH
Q 039814 384 SLDQISPLT-FSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIA 427 (454)
Q Consensus 384 ~l~~isp~t-~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Li 427 (454)
++++++... +++..-+-.+.+.+.|+++|||++++.+++|+.++
T Consensus 49 al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 49 ALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 467765443 46777788899999999999999999999999875
No 92
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.26 E-value=2.8 Score=37.55 Aligned_cols=118 Identities=16% Similarity=0.243 Sum_probs=75.5
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHhcccchhHH
Q 039814 162 FNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIAEAPKTD--LEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFT 239 (454)
Q Consensus 162 ~~i~nK~ll~~fp~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~--~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a 239 (454)
.+-.|-.+-+....|..-++..+.+|.+++......+. +.+... .+..++.+..|++++............+.++.+
T Consensus 20 Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~-~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t 98 (150)
T COG3238 20 QAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQ-GHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATT 98 (150)
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHH
Confidence 33456666666667999999999998877655433322 222211 221233455667776666666666666665555
Q ss_pred H-HHHhhhhHHHHHHHHHHh----cccCChhhHHHHHhHhhhheee
Q 039814 240 H-IIKSGEPAFSVLVSRFLF----GETLPMPVYMSLLPIIGGCALA 280 (454)
Q Consensus 240 ~-ii~s~~Pifv~lls~l~l----~er~s~~~~lsl~li~~Gv~l~ 280 (454)
. ++.+.+-+..+++..+=+ +++++..++++++++++|+.++
T Consensus 99 ~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 99 IALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 4 445677777777776632 2678899999999999995543
No 93
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.97 E-value=4 Score=36.55 Aligned_cols=140 Identities=11% Similarity=0.138 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhHHHHHHhhchHHHHHHH
Q 039814 289 MIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVA 368 (454)
Q Consensus 289 ~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l~~e~~~~~~~~~~~~~~~~~~~~l~~ll 368 (454)
+...+.++++.++-..++-+..++.+... +++.........+...+.-..++.++...+. + ... .-|+..
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a--~------~~~-~pwW~~ 73 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLA--A------VAS-APWWAW 73 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh--h------ccC-CchHHH
Confidence 34566777777777777777655543322 2433333334444444444444344322111 0 000 112333
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHH-HHHHHHHHHHHHH-HhC---CCCchhhHHhHHHHHHHHHHHHhhh
Q 039814 369 AQSIFYHLYNQVSYMSLDQISPLTFSIGN-TMKRISVIVSSII-IFH---TPVQPVNALGAAIAILGTFIYSQFL 438 (454)
Q Consensus 369 ~~~l~~~l~n~~~f~~l~~isp~t~sv~~-~lkpV~~ills~l-~fg---E~lt~~~ilG~~Lil~Gv~ly~~~k 438 (454)
..|+++..+-........+++++++-... .-+-+.+.+++.+ +|| .+++...++|++++++|+++..+.+
T Consensus 74 ~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 74 IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 44555555544455567888877665543 3344445555544 344 3589999999999999976665543
No 94
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=89.59 E-value=0.94 Score=45.67 Aligned_cols=129 Identities=13% Similarity=0.051 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHh--c--CCchHHHHHHHHHHHHHHHH-HHHHh--h-hc---CCCCCCHHHHHHHHHHHHH
Q 039814 151 YFATWWALNVVFNIYNKKVLN--A--FPYPWLTSTLSLACGSLMML-VSWAT--R-IA---EAPKTDLEFWKSLFPVAVA 219 (454)
Q Consensus 151 ~~~lw~~~s~~~~i~nK~ll~--~--fp~P~~lt~lr~~~a~l~ll-l~~~~--~-~~---~~~~~~~~~~~~ll~~gll 219 (454)
++..+-.....-+++.|.++. + .+ ++.+....--++.++++ +.+.. + .. .....+...+. +...+++
T Consensus 167 ~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~sv~ 244 (316)
T KOG1441|consen 167 SAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-LLLNSVL 244 (316)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-HHHHHHH
Confidence 345565666667788899984 2 44 66555555444444444 33222 1 11 11011223232 3344456
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeee
Q 039814 220 HTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAA 281 (454)
Q Consensus 220 ~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~ 281 (454)
....+...+..+..+++-+.++.....=+++...++++++++.++...+|.+++++|+.+..
T Consensus 245 ~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 245 AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 56667778889999999999999888888888999999999999999999999999998754
No 95
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=88.90 E-value=0.54 Score=47.87 Aligned_cols=66 Identities=17% Similarity=0.070 Sum_probs=55.6
Q ss_pred HHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhhhccc
Q 039814 376 LYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQFLVQD 441 (454)
Q Consensus 376 l~n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~k~~~ 441 (454)
+.|+....++++++.....+.....-+++..+|.++-+|++|+..++|.++-++|+++.+..+.++
T Consensus 171 ~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 171 LANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 334444456788888888888999999999999999999999999999999999999988776544
No 96
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=87.83 E-value=6.1 Score=39.37 Aligned_cols=74 Identities=15% Similarity=0.274 Sum_probs=63.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhhee
Q 039814 206 DLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCAL 279 (454)
Q Consensus 206 ~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l 279 (454)
..+.++-++..+.+++.++.+.++-++.-.+-..++|..+==+++.+++.+.++.++++.+|+++.++++|..+
T Consensus 237 hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 237 HPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred ChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 45678889999999999998888888766666666777777889999999999999999999999999999864
No 97
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=84.17 E-value=44 Score=34.03 Aligned_cols=138 Identities=18% Similarity=0.224 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHH-HhcchHHHHHhHHHHHHhhchHHHHHH
Q 039814 289 MIGFMGAMISNLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLILTPFAI-AVEGPQMWAAGWQKAIAQIGPNFVWWV 367 (454)
Q Consensus 289 ~~G~ll~lls~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll~P~~l-~~e~~~~~~~~~~~~~~~~~~~~l~~l 367 (454)
..|+++..++.++.+.+-+=.||. |+ .+--++.....+++-+ .+|... ..+-|+++. .+.......++..
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv-k~--WsWEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~-----i~~~~~~~~l~~~ 76 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV-KG--WSWESYWLVQGIFSWL-IVPWLWALLAIPDFFS-----IYSATPASTLFWT 76 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc-CC--ccHHHHHHHHHHHHHH-HHHHHHHHHhCCcHHH-----HHHhCChhHHHHH
Confidence 579999999999998888877775 22 3333334344555444 345433 333343321 1111111111211
Q ss_pred HHHH----HHHHHHHHHHHHHhhhhc-hHHHHHHHHHHHHHHHHHHHHHhC-------CCCchhhHHhHHHHHHHHHHHH
Q 039814 368 AAQS----IFYHLYNQVSYMSLDQIS-PLTFSIGNTMKRISVIVSSIIIFH-------TPVQPVNALGAAIAILGTFIYS 435 (454)
Q Consensus 368 l~~~----l~~~l~n~~~f~~l~~is-p~t~sv~~~lkpV~~ills~l~fg-------E~lt~~~ilG~~Lil~Gv~ly~ 435 (454)
.+.| +.+..+. ..+++++ ++..++..-+-.+++.++--++.| ++-....++|.+++++|+.+..
T Consensus 77 ~l~G~lWGIGgltfG----l~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g 152 (344)
T PF06379_consen 77 FLFGVLWGIGGLTFG----LAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICG 152 (344)
T ss_pred HHHHHHHhcchhhHh----HHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHh
Confidence 1111 1111111 1245553 334444444445555555444433 3345578999999999999988
Q ss_pred hhhc
Q 039814 436 QFLV 439 (454)
Q Consensus 436 ~~k~ 439 (454)
+...
T Consensus 153 ~AG~ 156 (344)
T PF06379_consen 153 KAGS 156 (344)
T ss_pred HHHH
Confidence 7643
No 98
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=83.24 E-value=1.6 Score=40.71 Aligned_cols=60 Identities=22% Similarity=0.196 Sum_probs=52.5
Q ss_pred HHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhh
Q 039814 378 NQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 378 n~~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~ 437 (454)
|+....++++++|..++.....+..+..+++|+++||++....++..++.+.|+.+..+.
T Consensus 67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~ 126 (290)
T KOG4314|consen 67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA 126 (290)
T ss_pred CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence 333445789999999999999999999999999999999999999999999998766544
No 99
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=81.28 E-value=2.4 Score=36.18 Aligned_cols=39 Identities=15% Similarity=0.255 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHH
Q 039814 395 IGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFI 433 (454)
Q Consensus 395 v~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~l 433 (454)
+.|.+.=+++.+.|+++..|..+...++|+++++.|+.+
T Consensus 73 i~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 73 IANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 456777899999998888888899999999999999865
No 100
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=80.20 E-value=2.4 Score=40.67 Aligned_cols=71 Identities=15% Similarity=0.254 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhhee
Q 039814 209 FWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCAL 279 (454)
Q Consensus 209 ~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l 279 (454)
.|..+..+|+..++++++.+.-..+-++-.-+++..+--+|+.+.+.++++..++.++|+|.++++.|...
T Consensus 240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 46677888888888888887777666665556666777889999999999999999999999999988754
No 101
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=77.27 E-value=29 Score=33.34 Aligned_cols=118 Identities=9% Similarity=0.032 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHH-HHHhhhcCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 039814 159 NVVFNIYNKKVLN--AFPYPWLTSTLSLACGSLMMLV-SWATRIAEAP----KTDLEFWKSLFPVAVAHTIGHVAATVSM 231 (454)
Q Consensus 159 s~~~~i~nK~ll~--~fp~P~~lt~lr~~~a~l~lll-~~~~~~~~~~----~~~~~~~~~ll~~gll~~l~~~~~~~al 231 (454)
+..+.+..|...+ +|. -....++.-+.+..+++. .......... ...-+...+++.-|++-.+-.++.-|.+
T Consensus 167 saafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcv 245 (309)
T COG5070 167 SAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCV 245 (309)
T ss_pred HHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeE
Confidence 3334455555543 454 444556665555554433 3333221111 1223444567777777766667778999
Q ss_pred cccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhh
Q 039814 232 SKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGC 277 (454)
Q Consensus 232 ~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv 277 (454)
+-++....++..++.-...++.+.++++|..++..+.++++++...
T Consensus 246 rVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg 291 (309)
T COG5070 246 RVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSG 291 (309)
T ss_pred eehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHH
Confidence 9999999999999998889999999999999988888877766543
No 102
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=72.77 E-value=52 Score=27.71 Aligned_cols=52 Identities=19% Similarity=0.239 Sum_probs=34.8
Q ss_pred HHhcccchhHHHHHH-hhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheee
Q 039814 229 VSMSKVAVSFTHIIK-SGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALA 280 (454)
Q Consensus 229 ~al~~vs~s~a~ii~-s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~ 280 (454)
.|.+..+.+---+++ ..+-...+.++.+++||++++....|.+++++++..+
T Consensus 54 iG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 54 IGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 444444443333333 2333444567788999999999999999998887654
No 103
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=69.08 E-value=13 Score=36.84 Aligned_cols=52 Identities=21% Similarity=0.196 Sum_probs=43.5
Q ss_pred hhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHh
Q 039814 385 LDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQ 436 (454)
Q Consensus 385 l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~ 436 (454)
+..+++..+-+.--..-+++-+++..+++.+++..||+|+..+.+|+.....
T Consensus 107 L~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 107 LNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred HHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 4556777777776677789999999999999999999999999999876543
No 104
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.47 E-value=68 Score=26.65 Aligned_cols=32 Identities=25% Similarity=0.293 Sum_probs=27.1
Q ss_pred HHHHHHHHHhcccCChhhHHHHHhHhhhheee
Q 039814 249 FSVLVSRFLFGETLPMPVYMSLLPIIGGCALA 280 (454)
Q Consensus 249 fv~lls~l~l~er~s~~~~lsl~li~~Gv~l~ 280 (454)
.-+.++.+.++|.+++..+.+..++.+|+.++
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 33467888999999999999999999998765
No 105
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=61.75 E-value=15 Score=36.30 Aligned_cols=132 Identities=18% Similarity=0.233 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHH-Hhh----hcCCCCC-CHHHHHHHHHHHHH
Q 039814 148 IGIYFATWWALNVVFN-IYNKKVLNAF-PYPWLTSTLSLACGSLMMLVSW-ATR----IAEAPKT-DLEFWKSLFPVAVA 219 (454)
Q Consensus 148 l~~~~~lw~~~s~~~~-i~nK~ll~~f-p~P~~lt~lr~~~a~l~lll~~-~~~----~~~~~~~-~~~~~~~ll~~gll 219 (454)
++..+.+|-.+.+.++ ++.|..+... .--|-++++.-+.+.++.+... ..+ ....|.. ...+|..+...|++
T Consensus 185 ~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglf 264 (347)
T KOG1442|consen 185 IGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLF 264 (347)
T ss_pred hhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHH
Confidence 4444555655555544 6778665432 2235677777666655544322 222 2222332 45667767777777
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhhee
Q 039814 220 HTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCAL 279 (454)
Q Consensus 220 ~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l 279 (454)
+....+...+-++.+++-+..+-....-+--.+++..+++|.-+...|-+-+++.+|..+
T Consensus 265 gF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~ 324 (347)
T KOG1442|consen 265 GFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLA 324 (347)
T ss_pred HHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHH
Confidence 644334444555556554444444555666678888999999988888888777777544
No 106
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=61.67 E-value=10 Score=31.86 Aligned_cols=29 Identities=7% Similarity=0.016 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCCchhhHHhHHHHHHHHHH
Q 039814 405 IVSSIIIFHTPVQPVNALGAAIAILGTFI 433 (454)
Q Consensus 405 ills~l~fgE~lt~~~ilG~~Lil~Gv~l 433 (454)
+.++++++||++++.++.|.+.++.+++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 45778999999999999999999888764
No 107
>PRK02237 hypothetical protein; Provisional
Probab=60.27 E-value=22 Score=30.04 Aligned_cols=46 Identities=11% Similarity=0.088 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhh
Q 039814 392 TFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 392 t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~ 437 (454)
.++..+-+--+.++++++.+-|++++...++|.+++++|+.+.-..
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 3445566667788899999999999999999999999999776443
No 108
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=56.70 E-value=17 Score=30.62 Aligned_cols=71 Identities=20% Similarity=0.226 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhHHHH-HHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeee
Q 039814 210 WKSLFPVAVAHTIGHVAATVSMSKVAVSFTHI-IKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAA 281 (454)
Q Consensus 210 ~~~ll~~gll~~l~~~~~~~al~~vs~s~a~i-i~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~ 281 (454)
|..++|..+-. .+..++++-++..+.+.+.- -.+++-+|+++.+..+.-|....+.++|..++++|+.+..
T Consensus 53 w~Y~iPFllNq-cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 53 WEYLIPFLLNQ-CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHHHHHH-hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 44445554433 34456677788777776653 3567888999999877656666899999999999987653
No 109
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=56.08 E-value=1.2e+02 Score=25.27 Aligned_cols=49 Identities=12% Similarity=0.196 Sum_probs=35.7
Q ss_pred hhhchHHHHH--HHHHHHHHH----HHHHHHHhCCCCchhhHHhHHHHHHHHHHH
Q 039814 386 DQISPLTFSI--GNTMKRISV----IVSSIIIFHTPVQPVNALGAAIAILGTFIY 434 (454)
Q Consensus 386 ~~isp~t~sv--~~~lkpV~~----ills~l~fgE~lt~~~ilG~~Lil~Gv~ly 434 (454)
.|++-...++ .-.++.|++ +.+|++.++|++.+.++.|..+++.|+++.
T Consensus 59 NRiG~~v~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 59 NRIGHQVYSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred chhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 4555444443 344555544 347899999999999999999999998764
No 110
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=55.54 E-value=23 Score=29.81 Aligned_cols=45 Identities=13% Similarity=0.127 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHHhh
Q 039814 393 FSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYSQF 437 (454)
Q Consensus 393 ~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~~~ 437 (454)
++..+-+--+.++++++.+-|++++...++|..+++.|+.+.-..
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 344555566788899999999999999999999999998876543
No 111
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=52.40 E-value=2.6e+02 Score=28.19 Aligned_cols=56 Identities=13% Similarity=0.147 Sum_probs=47.9
Q ss_pred HHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHH
Q 039814 380 VSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYS 435 (454)
Q Consensus 380 ~~f~~l~~isp~t~sv~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~ 435 (454)
.....+++++-..+.++-.+.++++.+...++||..++..-+......++|...+.
T Consensus 93 t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 93 TGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred HccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 33456899999999999999999999999999999999888888888888876554
No 112
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=48.51 E-value=1e+02 Score=26.77 Aligned_cols=43 Identities=21% Similarity=0.450 Sum_probs=34.2
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHH
Q 039814 141 EAAQRLKIGIYFATWWALNVVFNIYNKKVLNAFP-YPWLTSTLS 183 (454)
Q Consensus 141 ~~~~~~~l~~~~~lw~~~s~~~~i~nK~ll~~fp-~P~~lt~lr 183 (454)
..++.++++++.++...++++..++-|..+..++ ||++++-+-
T Consensus 51 ~~ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlT 94 (130)
T PF08627_consen 51 YSKENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLT 94 (130)
T ss_pred hhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhc
Confidence 3466788888888888888888899999988765 788877763
No 113
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=47.19 E-value=1.3e+02 Score=25.30 Aligned_cols=40 Identities=13% Similarity=-0.041 Sum_probs=33.0
Q ss_pred hhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeec
Q 039814 244 SGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVT 283 (454)
Q Consensus 244 s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~ 283 (454)
....+...+-.+.+-|+++++..++|..++++|+.++...
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 4445666777888899999999999999999999877543
No 114
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=46.46 E-value=1.8e+02 Score=24.50 Aligned_cols=39 Identities=13% Similarity=-0.072 Sum_probs=31.4
Q ss_pred hhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeec
Q 039814 245 GEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVT 283 (454)
Q Consensus 245 ~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~ 283 (454)
...+...+-.++.-|.++++..|.|..++++|+.++..+
T Consensus 67 vyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 67 VYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred hHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 344556667777889999999999999999998877654
No 115
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=44.86 E-value=16 Score=36.79 Aligned_cols=40 Identities=10% Similarity=0.224 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCchhhHHhHHHHHHHHHHHH
Q 039814 396 GNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFIYS 435 (454)
Q Consensus 396 ~~~lkpV~~ills~l~fgE~lt~~~ilG~~Lil~Gv~ly~ 435 (454)
.+.+.-+...+++..+++|.++....+|+++.++|..+.-
T Consensus 96 LGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV 135 (335)
T KOG2922|consen 96 LGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV 135 (335)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence 3445667889999999999999999999999999976543
No 116
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=44.46 E-value=13 Score=36.13 Aligned_cols=75 Identities=16% Similarity=0.206 Sum_probs=56.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhH----HHHHhHhhhheee
Q 039814 205 TDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVY----MSLLPIIGGCALA 280 (454)
Q Consensus 205 ~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~----lsl~li~~Gv~l~ 280 (454)
.++..|. -...|+..+.++.+...|-+.+.+++.-.+..+..+...+.+.+|+|||=+++++ .|+++++.|..+.
T Consensus 205 ~~K~t~~-nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l 283 (288)
T COG4975 205 FNKYTWL-NIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL 283 (288)
T ss_pred hHHHHHH-HHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence 3455454 4567888888888888888888888877788888889999999999999888765 4555666665443
No 117
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=43.70 E-value=3.8e+02 Score=27.47 Aligned_cols=103 Identities=20% Similarity=0.185 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH-HhhhhHHHHHHHHHHhc-------ccCChhhHHHHHhHhhhhee
Q 039814 208 EFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHII-KSGEPAFSVLVSRFLFG-------ETLPMPVYMSLLPIIGGCAL 279 (454)
Q Consensus 208 ~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii-~s~~Pifv~lls~l~l~-------er~s~~~~lsl~li~~Gv~l 279 (454)
+.+...+..|++..++...+-.+++|+.+|..+-| ..+.-++-.++-.++.+ .+-....++|+++.++|+++
T Consensus 71 ~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai 150 (344)
T PF06379_consen 71 STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAI 150 (344)
T ss_pred hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHH
Confidence 44566677888887777777888999887776533 34444444444444433 23345789999999999987
Q ss_pred eeec----C-------Ccch-HHHHHHHHHHHHHHHHHHHHHH
Q 039814 280 AAVT----E-------LNFN-MIGFMGAMISNLAFVFRNIFSK 310 (454)
Q Consensus 280 ~~~~----~-------~~~~-~~G~ll~lls~l~~A~~~Vl~k 310 (454)
.... | .++| -.|.+.+++|.+..|+.++-..
T Consensus 151 ~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 151 CGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred HhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 6531 1 1233 3699999999988888877544
No 118
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=42.58 E-value=1.5e+02 Score=27.87 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=26.1
Q ss_pred HHhhhhHHHHHHHHHHhcccCCh-------------hhHHHHHhHhhhheee
Q 039814 242 IKSGEPAFSVLVSRFLFGETLPM-------------PVYMSLLPIIGGCALA 280 (454)
Q Consensus 242 i~s~~Pifv~lls~l~l~er~s~-------------~~~lsl~li~~Gv~l~ 280 (454)
.....|+...++.+.+.+||... +...+.++.++|+.++
T Consensus 158 ~i~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~~~~~i~~~i~~i~G~~l~ 209 (214)
T PF11139_consen 158 LIASLPALLPLLAYLVAPERAEPWLERLRSWLRRHSRQILAVILLIVGALLL 209 (214)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 34677888888888888876532 4555666666666554
No 119
>PRK02237 hypothetical protein; Provisional
Probab=41.20 E-value=2.2e+02 Score=24.09 Aligned_cols=39 Identities=15% Similarity=-0.095 Sum_probs=32.1
Q ss_pred hhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeee
Q 039814 244 SGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAV 282 (454)
Q Consensus 244 s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~ 282 (454)
....+...+..+.+-|+|+++..++|..++++|+.++..
T Consensus 67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 344555667788889999999999999999999987644
No 120
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=40.74 E-value=1e+02 Score=30.54 Aligned_cols=75 Identities=17% Similarity=0.190 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHHHHHHHHhcccCChhhHHHHHhHhhhheeeeecCC
Q 039814 211 KSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALAAVTEL 285 (454)
Q Consensus 211 ~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~~~~~~ 285 (454)
...+..++...++..+-..=++.-.+..+.++...--..+.+++++++.+.++..-..+..+++.|+.+=..++.
T Consensus 261 Gy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 261 GYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred HHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 334444544444433322222334566666666666778899999999999999999999999999987666553
No 121
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=34.43 E-value=5.5e+02 Score=26.66 Aligned_cols=47 Identities=9% Similarity=0.052 Sum_probs=23.1
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHH
Q 039814 289 MIGFMGAMIS-NLAFVFRNIFSKKGMKGKSVGGMNYYACLSMMSLLIL 335 (454)
Q Consensus 289 ~~G~ll~lls-~l~~A~~~Vl~kk~~~~~~~~~l~~~~~~~~~~~lll 335 (454)
+..++..+++ .+++-....+.+|..-+++.+....-....+.+.+..
T Consensus 275 ~~A~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~ 322 (399)
T PF00909_consen 275 WGALLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILT 322 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHH
T ss_pred HHHHHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHH
Confidence 3344444444 5555555545555433445555555455555555443
No 122
>PF07331 TctB: Tripartite tricarboxylate transporter TctB family; InterPro: IPR009936 This entry contains bacterial proteins of around 150 residues in length, which have 4 transmembrane domains. Some of the sequences in the entry are annotated as the TctB subunit of the tripartite tricarboxylate transport(TTT) family. However there is no direct evidence to support this annotation as characterised members of this family are not associated with the entry.
Probab=27.60 E-value=3.9e+02 Score=22.80 Aligned_cols=40 Identities=23% Similarity=0.341 Sum_probs=18.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHH
Q 039814 175 YPWLTSTLSLACGSLMMLVSWATRIAEAPKTDLEFWKSLF 214 (454)
Q Consensus 175 ~P~~lt~lr~~~a~l~lll~~~~~~~~~~~~~~~~~~~ll 214 (454)
+|..+...-.+++.+.+.-....+..+.+..++..++...
T Consensus 37 fP~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 76 (141)
T PF07331_consen 37 FPRLLGILLLILSLLLLVRSFRGPDEDEEPFDRVDWKRVL 76 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccccccccHHHHHHHH
Confidence 5666666666665554433333322222333344444443
No 123
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=26.05 E-value=22 Score=35.08 Aligned_cols=51 Identities=12% Similarity=0.100 Sum_probs=0.0
Q ss_pred cccchhHHHHHHhhhhHHHHHHH-HHHhccc-CChhhHHHHHhHhhhheeeee
Q 039814 232 SKVAVSFTHIIKSGEPAFSVLVS-RFLFGET-LPMPVYMSLLPIIGGCALAAV 282 (454)
Q Consensus 232 ~~vs~s~a~ii~s~~Pifv~lls-~l~l~er-~s~~~~lsl~li~~Gv~l~~~ 282 (454)
+-.+-+..+++.+...+.+.++- .+++++| +-+.-.++++++++-..++..
T Consensus 45 sd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L 97 (381)
T PF05297_consen 45 SDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSML 97 (381)
T ss_dssp -----------------------------------------------------
T ss_pred hccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHH
Confidence 33333334444444433333322 2334444 446667777777666555443
No 124
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=23.69 E-value=5.8e+02 Score=26.85 Aligned_cols=120 Identities=13% Similarity=0.001 Sum_probs=53.7
Q ss_pred CCchHHHHHHHHHHHHHH-HHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHhhhhHHHH
Q 039814 173 FPYPWLTSTLSLACGSLM-MLVSWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSV 251 (454)
Q Consensus 173 fp~P~~lt~lr~~~a~l~-lll~~~~~~~~~~~~~~~~~~~ll~~gll~~l~~~~~~~al~~vs~s~a~ii~s~~Pifv~ 251 (454)
||.|.++...|-+.-.+. ..+....++. ... .+....+++.+.++..... ....-.|-.....|.+..
T Consensus 56 ~Ps~~tLli~Qal~la~~~~pl~~lar~~-~~~-----~~~a~~~~~~ylL~p~~~~-----~~~~dFH~~~~avPll~~ 124 (449)
T PF09852_consen 56 FPSPLTLLIVQALLLALGAIPLYRLARRR-LLS-----RRLALLIALAYLLSPGLQG-----ANLFDFHPVAFAVPLLLW 124 (449)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHH-cCC-----cHHHHHHHHHHHHhHHHHh-----hhhCCCcHHHHHHHHHHH
Confidence 588999999985443333 3233222222 111 1223445555544433322 222223334444566555
Q ss_pred HHHHHHhcccCCh-----------hhHHHHHhHhhhheeeeecCCcchHHHHHHHHHHHHHHHHHH
Q 039814 252 LVSRFLFGETLPM-----------PVYMSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRN 306 (454)
Q Consensus 252 lls~l~l~er~s~-----------~~~lsl~li~~Gv~l~~~~~~~~~~~G~ll~lls~l~~A~~~ 306 (454)
.+- .+.++|... ++-.++.++..|+.++... .-...|...++++.+-+.+..
T Consensus 125 ~~~-~~~~~r~~~~~~~~ll~llvKEd~~l~v~~~gl~~~~~~--r~~r~g~~~~~~~~~~~~l~~ 187 (449)
T PF09852_consen 125 ALY-ALERRRWRLFILWALLLLLVKEDLGLTVAGIGLYLLLRR--RKRRWGLALAVFGVAWFILAT 187 (449)
T ss_pred HHH-HHHhCcHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhC--ccchHHHHHHHHHHHHHHHHH
Confidence 554 444544433 2233444444444444332 112246666655555544443
No 125
>PF06210 DUF1003: Protein of unknown function (DUF1003); InterPro: IPR010406 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=22.32 E-value=2.2e+02 Score=23.97 Aligned_cols=10 Identities=40% Similarity=1.052 Sum_probs=4.5
Q ss_pred HHHHHHHHHH
Q 039814 151 YFATWWALNV 160 (454)
Q Consensus 151 ~~~lw~~~s~ 160 (454)
++++|.+.|+
T Consensus 13 ~~~~Wi~~N~ 22 (108)
T PF06210_consen 13 FLAVWILLNI 22 (108)
T ss_pred HHHHHHHHHh
Confidence 3444544443
No 126
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=22.15 E-value=8.4e+02 Score=24.79 Aligned_cols=35 Identities=14% Similarity=0.336 Sum_probs=27.8
Q ss_pred hhHHHHHHHHHHhcccCChhhHHHHHhHhhhheee
Q 039814 246 EPAFSVLVSRFLFGETLPMPVYMSLLPIIGGCALA 280 (454)
Q Consensus 246 ~Pifv~lls~l~l~er~s~~~~lsl~li~~Gv~l~ 280 (454)
.=+.+.+++..+.+++++...|+|+.++..|+..-
T Consensus 279 Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 279 KEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 34557778888888888888888888888887664
No 127
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=20.03 E-value=89 Score=22.32 Aligned_cols=21 Identities=14% Similarity=0.188 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHhhhcccccc
Q 039814 424 AAIAILGTFIYSQFLVQDLGI 444 (454)
Q Consensus 424 ~~Lil~Gv~ly~~~k~~~~~~ 444 (454)
+.++++|+++|...+++++..
T Consensus 19 ~~~~Figiv~wa~~p~~k~~f 39 (48)
T cd01324 19 LALFFLGVVVWAFRPGRKKAF 39 (48)
T ss_pred HHHHHHHHHHHHhCCCcchhH
Confidence 468889999998887655443
Done!