BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039817
(725 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 162/318 (50%), Gaps = 56/318 (17%)
Query: 434 PKPKPPEINM---KVFSYQELREATNVFDGQEVE------------------VAVKQL-E 471
P + PE+++ K FS +EL+ A++ F + + VAVK+L E
Sbjct: 13 PAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKE 72
Query: 472 KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIP 531
+ GE F EV++I H+NL++L GFC+ +LLVY M NG++++ L +E P
Sbjct: 73 ERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL--RERP 130
Query: 532 T------WDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKI 585
W KR IALG ARGL YLH+ C+ +IIH D+K N+ +
Sbjct: 131 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-------V 183
Query: 586 ADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHT 645
DFGLAKL+ +RGT+G++APE+L + K DV+ +GVMLLE+I +R
Sbjct: 184 GDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
Query: 646 ELHRVDEPTLAN--GMILTDWVLYCVRT------------GNLGATKFERITMVGLWCIC 691
+L R LAN ++L DWV ++ GN + E++ V L C
Sbjct: 244 DLAR-----LANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQ 298
Query: 692 PQPTLRPSMKQVLQMLEG 709
P RP M +V++MLEG
Sbjct: 299 SSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 164/318 (51%), Gaps = 56/318 (17%)
Query: 434 PKPKPPEINM---KVFSYQELREATN---------------VFDGQEVE---VAVKQL-E 471
P + PE+++ K FS +EL+ A++ V+ G+ + VAVK+L E
Sbjct: 5 PAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKE 64
Query: 472 KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIP 531
+ T GE F EV++I H+NL++L GFC+ +LLVY M NG++++ L +E P
Sbjct: 65 ERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL--RERP 122
Query: 532 T------WDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKI 585
W KR IALG ARGL YLH+ C+ +IIH D+K N+ +
Sbjct: 123 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-------V 175
Query: 586 ADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHT 645
DFGLAKL+ +RG +G++APE+L + K DV+ +GVMLLE+I +R
Sbjct: 176 GDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
Query: 646 ELHRVDEPTLAN--GMILTDWVLYCVR------------TGNLGATKFERITMVGLWCIC 691
+L R LAN ++L DWV ++ GN + E++ V L C
Sbjct: 236 DLAR-----LANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQ 290
Query: 692 PQPTLRPSMKQVLQMLEG 709
P RP M +V++MLEG
Sbjct: 291 SSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 140/295 (47%), Gaps = 52/295 (17%)
Query: 450 ELREATNVFD-----GQEV-------------EVAVKQLEKVTGDGEKSFLREVQVIGRT 491
+L EATN FD G V +VA+K+ + G + F E++ +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 492 HHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPT----WDKRVEIALGIARGL 547
H +LV L+GFC E+N +L+Y+ M+NG L L+ ++PT W++R+EI +G ARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 548 LYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKL-LKKDQTRTSTMIR 606
YLH IIH D+K N+ KI DFG++K + DQT +++
Sbjct: 153 HYLHTRA---IIHRDVKSINI-------LLDENFVPKITDFGISKKGTELDQTHLXXVVK 202
Query: 607 GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMI-LTDWV 665
GT+GY+ PE+ +T K DVYSFGV+L E++ C R + +L M+ L +W
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL-CARSAIVQ-----SLPREMVNLAEWA 256
Query: 666 LYCVRTGNLGA------------TKFERITMVGLWCICPQPTLRPSMKQVLQMLE 708
+ G L + + C+ RPSM VL LE
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 139/295 (47%), Gaps = 52/295 (17%)
Query: 450 ELREATNVFD-----GQEV-------------EVAVKQLEKVTGDGEKSFLREVQVIGRT 491
+L EATN FD G V +VA+K+ + G + F E++ +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 492 HHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPT----WDKRVEIALGIARGL 547
H +LV L+GFC E+N +L+Y+ M+NG L L+ ++PT W++R+EI +G ARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 548 LYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKL-LKKDQTRTSTMIR 606
YLH IIH D+K N+ KI DFG++K + QT +++
Sbjct: 153 HYLHTRA---IIHRDVKSINI-------LLDENFVPKITDFGISKKGTELGQTHLXXVVK 202
Query: 607 GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMI-LTDWV 665
GT+GY+ PE+ +T K DVYSFGV+L E++ C R + +L M+ L +W
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL-CARSAIVQ-----SLPREMVNLAEWA 256
Query: 666 LYCVRTGNLGA------------TKFERITMVGLWCICPQPTLRPSMKQVLQMLE 708
+ G L + + C+ RPSM VL LE
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 144/303 (47%), Gaps = 55/303 (18%)
Query: 446 FSYQELREATNVFDGQEVEV-----------------------AVKQLEKV----TGDGE 478
FS+ EL+ TN FD + + V AVK+L + T + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL--FRQEIP-TWDK 535
+ F +E++V+ + H+NLV+LLGF + + LVY M NG+L L P +W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 536 RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK 595
R +IA G A G+ +LH E IH DIK N+ KI+DFGLA+ +
Sbjct: 135 RCKIAQGAANGINFLH---ENHHIHRDIKSANI-------LLDEAFTAKISDFGLARASE 184
Query: 596 K-DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT 654
K QT + I GT YMAPE LR +T K D+YSFGV+LLEII + HR EP
Sbjct: 185 KFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQ 241
Query: 655 L---------ANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
L + D++ + + +T E + V C+ + RP +K+V Q
Sbjct: 242 LLLDIKEEIEDEEKTIEDYI--DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 706 MLE 708
+L+
Sbjct: 300 LLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 143/303 (47%), Gaps = 55/303 (18%)
Query: 446 FSYQELREATNVFDGQEVEV-----------------------AVKQLEKV----TGDGE 478
FS+ EL+ TN FD + + V AVK+L + T + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL--FRQEIP-TWDK 535
+ F +E++V+ + H+NLV+LLGF + + LVY M NG+L L P +W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 536 RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK 595
R +IA G A G+ +LH E IH DIK N+ KI+DFGLA+ +
Sbjct: 135 RCKIAQGAANGINFLH---ENHHIHRDIKSANI-------LLDEAFTAKISDFGLARASE 184
Query: 596 K-DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT 654
K QT I GT YMAPE LR +T K D+YSFGV+LLEII + HR EP
Sbjct: 185 KFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQ 241
Query: 655 L---------ANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
L + D++ + + +T E + V C+ + RP +K+V Q
Sbjct: 242 LLLDIKEEIEDEEKTIEDYI--DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 706 MLE 708
+L+
Sbjct: 300 LLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 142/303 (46%), Gaps = 55/303 (18%)
Query: 446 FSYQELREATNVFDGQEVEV-----------------------AVKQLEKV----TGDGE 478
FS+ EL+ TN FD + + V AVK+L + T + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL--FRQEIP-TWDK 535
+ F +E++V+ + H+NLV+LLGF + + LVY M NG+L L P +W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 536 RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK 595
R +IA G A G+ +LH E IH DIK N+ KI+DFGLA+ +
Sbjct: 129 RCKIAQGAANGINFLH---ENHHIHRDIKSANI-------LLDEAFTAKISDFGLARASE 178
Query: 596 K-DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT 654
K Q I GT YMAPE LR +T K D+YSFGV+LLEII + HR EP
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQ 235
Query: 655 L---------ANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
L + D++ + + +T E + V C+ + RP +K+V Q
Sbjct: 236 LLLDIKEEIEDEEKTIEDYI--DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 293
Query: 706 MLE 708
+L+
Sbjct: 294 LLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 139/303 (45%), Gaps = 55/303 (18%)
Query: 446 FSYQELREATNVFDGQEVEV-----------------------AVKQLEKV----TGDGE 478
FS+ EL+ TN FD + + V AVK+L + T + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL--FRQEIP-TWDK 535
+ F +E++V + H+NLV+LLGF + + LVY NG+L L P +W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 536 RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK 595
R +IA G A G+ +LH E IH DIK N+ KI+DFGLA+ +
Sbjct: 126 RCKIAQGAANGINFLH---ENHHIHRDIKSANI-------LLDEAFTAKISDFGLARASE 175
Query: 596 K-DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT 654
K Q + I GT Y APE LR +T K D+YSFGV+LLEII + HR EP
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR--EPQ 232
Query: 655 L---------ANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
L + D++ + + +T E V C+ + RP +K+V Q
Sbjct: 233 LLLDIKEEIEDEEKTIEDYI--DKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQ 290
Query: 706 MLE 708
+L+
Sbjct: 291 LLQ 293
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 25/295 (8%)
Query: 422 PLTRPYMCVQPSPKPKPPEINMKVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSF 481
P +M + PS EI F L N + +VA+K + K E F
Sbjct: 16 PRGSLHMVIDPSELTFVQEIGSGQFGLVHLGYWLN-----KDKVAIKTI-KEGSMSEDDF 69
Query: 482 LREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQE-IPTWDKRVEIA 540
+ E +V+ + H LVQL G C+EQ LV+E M++G LS +L Q + + + +
Sbjct: 70 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 129
Query: 541 LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR 600
L + G+ YL E C +IH D+ +N K++DFG+ + + DQ
Sbjct: 130 LDVCEGMAYLEEAC---VIHRDLAARNC-------LVGENQVIKVSDFGMTRFVLDDQYT 179
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMI 660
+ST + + + +PE + ++K DV+SFGV++ E+ + +R + + + I
Sbjct: 180 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED--I 237
Query: 661 LTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGV 715
T + LY R L +T +I C +P RP+ ++L+ L +E G+
Sbjct: 238 STGFRLYKPR---LASTHVYQIMN---HCWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 20/253 (7%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VA+K + + E+ F+ E +V+ + H LVQL G C+EQ LV+E M++G LS
Sbjct: 31 KVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 89
Query: 524 FLFRQE-IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
+L Q + + + + L + G+ YL E C +IH D+ +N
Sbjct: 90 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNC-------LVGENQV 139
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
K++DFG+ + + DQ +ST + + + +PE + ++K DV+SFGV++ E+
Sbjct: 140 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 199
Query: 643 RHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQ 702
+ +R + + + I T + LY R L +T +I C +P RP+ +
Sbjct: 200 KIPYENRSNSEVVED--ISTGFRLYKPR---LASTHVYQIMN---HCWKERPEDRPAFSR 251
Query: 703 VLQMLEGTSEVGV 715
+L+ L +E G+
Sbjct: 252 LLRQLAEIAESGL 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 20/253 (7%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VA+K + + E+ F+ E +V+ + H LVQL G C+EQ LV+E M++G LS
Sbjct: 33 KVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 91
Query: 524 FLFRQE-IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
+L Q + + + + L + G+ YL E C +IH D+ +N
Sbjct: 92 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNC-------LVGENQV 141
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
K++DFG+ + + DQ +ST + + + +PE + ++K DV+SFGV++ E+
Sbjct: 142 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 201
Query: 643 RHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQ 702
+ +R + + + I T + LY R L +T +I C +P RP+ +
Sbjct: 202 KIPYENRSNSEVVED--ISTGFRLYKPR---LASTHVYQIMN---HCWKERPEDRPAFSR 253
Query: 703 VLQMLEGTSEVGV 715
+L+ L +E G+
Sbjct: 254 LLRQLAEIAESGL 266
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 20/253 (7%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VA+K + + E+ F+ E +V+ + H LVQL G C+EQ LV+E M++G LS
Sbjct: 36 KVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 94
Query: 524 FLFRQE-IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
+L Q + + + + L + G+ YL E C +IH D+ +N
Sbjct: 95 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNC-------LVGENQV 144
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
K++DFG+ + + DQ +ST + + + +PE + ++K DV+SFGV++ E+
Sbjct: 145 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 204
Query: 643 RHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQ 702
+ +R + + + I T + LY R L +T +I C +P RP+ +
Sbjct: 205 KIPYENRSNSEVVED--ISTGFRLYKPR---LASTHVYQIMNH---CWRERPEDRPAFSR 256
Query: 703 VLQMLEGTSEVGV 715
+L+ L +E G+
Sbjct: 257 LLRQLAEIAESGL 269
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 24/265 (9%)
Query: 458 FDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
+ G +V V + + + FLREV ++ R H N+V +G + + +V E +
Sbjct: 58 WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLS 117
Query: 518 NGTLSAFLFR---QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
G+L L + +E +R+ +A +A+G+ YLH I+H D+K N+
Sbjct: 118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKY 176
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
K+ DFGL++L K S GT +MAPE LR+ P K DVYSFGV+
Sbjct: 177 TV-------KVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVI 228
Query: 635 LLEIIFCKRHTELHRVDEP--TLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICP 692
L E L + +P L ++ C R + ++ + C
Sbjct: 229 LWE---------LATLQQPWGNLNPAQVVAAVGFKCKRL-EIPRNLNPQVAAIIEGCWTN 278
Query: 693 QPTLRPSMKQVLQMLEGTSEVGVPP 717
+P RPS ++ +L + VPP
Sbjct: 279 EPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 24/265 (9%)
Query: 458 FDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
+ G +V V + + + FLREV ++ R H N+V +G + + +V E +
Sbjct: 58 WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLS 117
Query: 518 NGTLSAFLFR---QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
G+L L + +E +R+ +A +A+G+ YLH I+H ++K N+
Sbjct: 118 RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKY 176
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
K+ DFGL++L K +S GT +MAPE LR+ P K DVYSFGV+
Sbjct: 177 TV-------KVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVI 228
Query: 635 LLEIIFCKRHTELHRVDEP--TLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICP 692
L E L + +P L ++ C R + ++ + C
Sbjct: 229 LWE---------LATLQQPWGNLNPAQVVAAVGFKCKRL-EIPRNLNPQVAAIIEGCWTN 278
Query: 693 QPTLRPSMKQVLQMLEGTSEVGVPP 717
+P RPS ++ +L + VPP
Sbjct: 279 EPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 20/253 (7%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VA+K + + E+ F+ E +V+ + H LVQL G C+EQ LV E M++G LS
Sbjct: 34 KVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSD 92
Query: 524 FLFRQE-IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
+L Q + + + + L + G+ YL E C +IH D+ +N
Sbjct: 93 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNC-------LVGENQV 142
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
K++DFG+ + + DQ +ST + + + +PE + ++K DV+SFGV++ E+
Sbjct: 143 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 202
Query: 643 RHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQ 702
+ +R + + + I T + LY R L +T +I C +P RP+ +
Sbjct: 203 KIPYENRSNSEVVED--ISTGFRLYKPR---LASTHVYQIMNH---CWRERPEDRPAFSR 254
Query: 703 VLQMLEGTSEVGV 715
+L+ L +E G+
Sbjct: 255 LLRQLAEIAESGL 267
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 106/227 (46%), Gaps = 15/227 (6%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
+E ++ H N++ L G C+++ + LV E + G L+ L + IP D V A+
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP-DILVNWAVQ 113
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX-XXXXXXXKIADFGLAKLLKKDQTRT 601
IARG+ YLH+E IIH D+K N+ KI DFGLA ++ RT
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA----REWHRT 169
Query: 602 STM-IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMI 660
+ M G +MAPE +R + + DV+S+GV+L E++ + +D +A G+
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE--VPFRGIDGLAVAYGVA 227
Query: 661 LTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQML 707
+ L + +T E + C P P RPS +L L
Sbjct: 228 MNKLAL------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 123/253 (48%), Gaps = 20/253 (7%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VA+K + + E+ F+ E +V+ + H LVQL G C+EQ LV+E M++G LS
Sbjct: 33 KVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 91
Query: 524 FLFRQE-IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
+L Q + + + + L + G+ YL E +IH D+ +N
Sbjct: 92 YLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNC-------LVGENQV 141
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
K++DFG+ + + DQ +ST + + + +PE + ++K DV+SFGV++ E+
Sbjct: 142 IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 201
Query: 643 RHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQ 702
+ +R + + + I T + LY R L +T +I C +P RP+ +
Sbjct: 202 KIPYENRSNSEVVED--ISTGFRLYKPR---LASTHVYQIMN---HCWKERPEDRPAFSR 253
Query: 703 VLQMLEGTSEVGV 715
+L+ L + G+
Sbjct: 254 LLRQLAAIAASGL 266
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 27/203 (13%)
Query: 453 EATNVFDGQEVEVAV-KQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLL 511
+A V + EV V K+L + + +++FL+EV+V+ H N+++ +G +
Sbjct: 25 QAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF 84
Query: 512 VYELMKNGTLSAFL--FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
+ E +K GTL + + P W +RV A IA G+ YLH IIH D+ N
Sbjct: 85 ITEYIKGGTLRGIIKSMDSQYP-WSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCL 140
Query: 570 XXXXXXXXXXXXXXKIADFGLAKL-------------LKKDQTRTSTMIRGTMGYMAPEW 616
+ADFGLA+L LKK + + G +MAPE
Sbjct: 141 VRENKNVV-------VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 617 LRNAPVTAKVDVYSFGVMLLEII 639
+ KVDV+SFG++L EII
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEII 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 30/250 (12%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VA+KQ+E + K+F+ E++ + R +H N+V+L G C+ N LV E + G+L
Sbjct: 34 DVAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN 89
Query: 524 FLFRQE-IPTWDKRVEIA--LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXX 580
L E +P + ++ L ++G+ YLH +IH D+KP N+
Sbjct: 90 VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL--- 146
Query: 581 XXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
KI DFG A ++ T +G+ +MAPE + + K DV+S+G++L E+I
Sbjct: 147 ---KICDFGTACDIQTHMTNN----KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI- 198
Query: 641 CKRHTELHRVDEPTLANGMILTDWVLYCVRTGN---LGATKFERITMVGLWCICPQPTLR 697
R + P +++ V G L + I + C P+ R
Sbjct: 199 -TRRKPFDEIGGPAFR--------IMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQR 249
Query: 698 PSMKQVLQML 707
PSM+++++++
Sbjct: 250 PSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 30/250 (12%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VA+KQ+E + K+F+ E++ + R +H N+V+L G C+ N LV E + G+L
Sbjct: 33 DVAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN 88
Query: 524 FLFRQE-IPTWDKRVEIA--LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXX 580
L E +P + ++ L ++G+ YLH +IH D+KP N+
Sbjct: 89 VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL--- 145
Query: 581 XXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
KI DFG A ++ T +G+ +MAPE + + K DV+S+G++L E+I
Sbjct: 146 ---KICDFGTACDIQTHMTNN----KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI- 197
Query: 641 CKRHTELHRVDEPTLANGMILTDWVLYCVRTGN---LGATKFERITMVGLWCICPQPTLR 697
R + P +++ V G L + I + C P+ R
Sbjct: 198 -TRRKPFDEIGGPAFR--------IMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQR 248
Query: 698 PSMKQVLQML 707
PSM+++++++
Sbjct: 249 PSMEEIVKIM 258
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 56 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 115
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ +L + +H D+ +N
Sbjct: 116 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF 171
Query: 575 XXXXXXXXXKIADFGLAK-LLKK--DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ +L K D T + + +MA E L+ T K DV+SF
Sbjct: 172 TV-------KVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 224
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 225 GVLLWELM 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 114 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ +L + +H D+ +N
Sbjct: 174 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF 229
Query: 575 XXXXXXXXXKIADFGLAKLL---KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + D T + + +MA E L+ T K DV+SF
Sbjct: 230 TV-------KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 282
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 283 GVLLWELM 290
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ +L + +H D+ +N
Sbjct: 115 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF 170
Query: 575 XXXXXXXXXKIADFGLAKLL---KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + D T + + +MA E L+ T K DV+SF
Sbjct: 171 TV-------KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 224 GVLLWELM 231
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ +L + +H D+ +N
Sbjct: 115 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF 170
Query: 575 XXXXXXXXXKIADFGLAKLL---KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + D T + + +MA E L+ T K DV+SF
Sbjct: 171 TV-------KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 224 GVLLWELM 231
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 60 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 119
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ +L + +H D+ +N
Sbjct: 120 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF 175
Query: 575 XXXXXXXXXKIADFGLAKLL---KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + D T + + +MA E L+ T K DV+SF
Sbjct: 176 TV-------KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 228
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 229 GVLLWELM 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 53 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 112
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ +L + +H D+ +N
Sbjct: 113 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF 168
Query: 575 XXXXXXXXXKIADFGLAKLL---KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + D T + + +MA E L+ T K DV+SF
Sbjct: 169 TV-------KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 222 GVLLWELM 229
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 56 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 115
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ +L + +H D+ +N
Sbjct: 116 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKF 171
Query: 575 XXXXXXXXXKIADFGLAKLL---KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + D T + + +MA E L+ T K DV+SF
Sbjct: 172 TV-------KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 224
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 225 GVLLWELM 232
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 73 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 132
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ YL + +H D+ +N
Sbjct: 133 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF 188
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + T + + +MA E L+ T K DV+SF
Sbjct: 189 TV-------KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 241
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 242 GVLLWELM 249
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 74 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 133
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ YL + +H D+ +N
Sbjct: 134 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF 189
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + T + + +MA E L+ T K DV+SF
Sbjct: 190 TV-------KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 242
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 243 GVLLWELM 250
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ YL + +H D+ +N
Sbjct: 115 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF 170
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + T + + +MA E L+ T K DV+SF
Sbjct: 171 TV-------KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 224 GVLLWELM 231
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 54 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 113
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ YL + +H D+ +N
Sbjct: 114 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF 169
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + T + + +MA E L+ T K DV+SF
Sbjct: 170 TV-------KVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 223 GVLLWELM 230
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ YL + +H D+ +N
Sbjct: 115 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF 170
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + T + + +MA E L+ T K DV+SF
Sbjct: 171 TV-------KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 224 GVLLWELM 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 47 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 106
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ YL + +H D+ +N
Sbjct: 107 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF 162
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + T + + +MA E L+ T K DV+SF
Sbjct: 163 TV-------KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 215
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 216 GVLLWELM 223
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 53 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 112
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ YL + +H D+ +N
Sbjct: 113 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF 168
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + T + + +MA E L+ T K DV+SF
Sbjct: 169 TV-------KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 222 GVLLWELM 229
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 54 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 113
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ YL + +H D+ +N
Sbjct: 114 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF 169
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + T + + +MA E L+ T K DV+SF
Sbjct: 170 TV-------KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 223 GVLLWELM 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 50 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ YL + +H D+ +N
Sbjct: 110 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF 165
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + T + + +MA E L+ T K DV+SF
Sbjct: 166 TV-------KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 218
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 219 GVLLWELM 226
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELM 516
DG+++ AVK L ++T GE S FL E ++ H N++ LLG C+ + L+V M
Sbjct: 52 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111
Query: 517 KNGTLSAFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
K+G L F+ R E PT + L +A+G+ YL + +H D+ +N
Sbjct: 112 KHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKF 167
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ADFGLA+ + + T + + +MA E L+ T K DV+SF
Sbjct: 168 TV-------KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 220
Query: 632 GVMLLEII 639
GV+L E++
Sbjct: 221 GVLLWELM 228
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI-------LIN 181
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGLA++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 182 SNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 637 EII 639
E++
Sbjct: 242 EVM 244
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNI-------LIN 181
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 637 EII 639
E++
Sbjct: 242 EVM 244
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 43 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 102
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 103 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI-------LIN 152
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 153 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 212
Query: 637 EII 639
E++
Sbjct: 213 EVM 215
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 43 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENG 102
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 103 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI-------LIN 152
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 153 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 212
Query: 637 EII 639
E++
Sbjct: 213 EVM 215
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI-------LIN 181
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 637 EII 639
E++
Sbjct: 242 EVM 244
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENG 131
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNI-------LIN 181
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 637 EII 639
E++
Sbjct: 242 EVM 244
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 60 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 119
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 120 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI-------LIN 169
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 170 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 229
Query: 637 EII 639
E++
Sbjct: 230 EVM 232
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI-------LIN 181
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 637 EII 639
E++
Sbjct: 242 EVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI-------LIN 181
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 637 EII 639
E++
Sbjct: 242 EVM 244
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENG 131
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI-------LIN 181
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 637 EII 639
E++
Sbjct: 242 EVM 244
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI-------LIN 181
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 637 EII 639
E++
Sbjct: 242 EVM 244
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 70 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 129
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 130 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI-------LIN 179
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 180 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 239
Query: 637 EII 639
E++
Sbjct: 240 EVM 242
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N+++L G + ++V E M+NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI-------LIN 181
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL ++L+ D T G + + +PE + T+ DV+S+G++L
Sbjct: 182 SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 637 EII 639
E++
Sbjct: 242 EVM 244
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 27/215 (12%)
Query: 440 EINMKVFSYQELREATNVFDGQE-VEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQ 498
E+ F L E N+ Q+ + VAVK L+ + + K F RE +++ H+++V+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 499 LLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIP--------------TWDKRVEIALGIA 544
G C+E + ++V+E MK+G L+ FL R P T + + IA IA
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFL-RAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 545 RGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTST 603
G++YL +H D+ +N KI DFG+++ + D R
Sbjct: 139 AGMVYL---ASQHFVHRDLATRNC-------LVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ +M PE + T + DV+S GV+L EI
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 459 DGQEVEVAVKQL-EKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELM 516
DG ++ A+K++ E + D + F E++V+ + HH N++ LLG C + + L E
Sbjct: 39 DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 98
Query: 517 KNGTLSAFLFRQEIPTWD----------------KRVEIALGIARGLLYLHEECETQIIH 560
+G L FL + + D + + A +ARG+ YL ++ Q IH
Sbjct: 99 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIH 155
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620
D+ +N+ KIADFGL++ ++ TM R + +MA E L +
Sbjct: 156 RDLAARNI-------LVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYS 206
Query: 621 PVTAKVDVYSFGVMLLEII 639
T DV+S+GV+L EI+
Sbjct: 207 VYTTNSDVWSYGVLLWEIV 225
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 41 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 98
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 99 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 150
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 151 -----KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 205
Query: 639 IFCKR 643
+ R
Sbjct: 206 VTHGR 210
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 459 DGQEVEVAVKQL-EKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELM 516
DG ++ A+K++ E + D + F E++V+ + HH N++ LLG C + + L E
Sbjct: 49 DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 108
Query: 517 KNGTLSAFLFRQEIPTWD----------------KRVEIALGIARGLLYLHEECETQIIH 560
+G L FL + + D + + A +ARG+ YL ++ Q IH
Sbjct: 109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIH 165
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620
D+ +N+ KIADFGL++ ++ TM R + +MA E L +
Sbjct: 166 RDLAARNI-------LVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYS 216
Query: 621 PVTAKVDVYSFGVMLLEII 639
T DV+S+GV+L EI+
Sbjct: 217 VYTTNSDVWSYGVLLWEIV 235
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 48 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 105
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 106 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 157
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 158 -----KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 212
Query: 639 IFCKR 643
+ R
Sbjct: 213 VTHGR 217
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 24 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 81 PFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 136
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 137 ARNCLVGENHLV-------KVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 190 KSDVWAFGVLLWEI 203
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 39 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 96
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 97 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 148
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 149 -----KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 639 IFCKR 643
+ R
Sbjct: 204 VTHGR 208
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 31 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 88 PFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 143
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 144 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 39 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 96
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 97 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 148
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 149 -----KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 639 IFCKR 643
+ R
Sbjct: 204 VTHGR 208
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 47 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 104
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 105 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 156
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 157 -----KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 211
Query: 639 IFCKR 643
+ R
Sbjct: 212 VTHGR 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 45 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 102
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 103 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 154
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 155 -----KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 639 IFCKR 643
+ R
Sbjct: 210 VTHGR 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 40 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 97
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 98 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 149
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 150 -----KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 204
Query: 639 IFCKR 643
+ R
Sbjct: 205 VTHGR 209
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 31 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 143
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 144 ARNCLVGENHLV-------KVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 31 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 143
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 144 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 31 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 143
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 144 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 39 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 96
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 97 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 148
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 149 -----KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 639 IFCKR 643
+ R
Sbjct: 204 VTHGR 208
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 44 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 101
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 102 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 153
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 154 -----KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 208
Query: 639 IFCKR 643
+ R
Sbjct: 209 VTHGR 213
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 45 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 102
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 103 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 154
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 155 -----KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 639 IFCKR 643
+ R
Sbjct: 210 VTHGR 214
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 26 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 83 PFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 138
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 139 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 25 QYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTRE 81
Query: 507 NHQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 82 PPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDL 137
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVT 623
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 138 AARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 624 AKVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 191 IKSDVWAFGVLLWEI 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 34 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 91
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 92 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 143
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 144 -----KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 198
Query: 639 IFCKR 643
+ R
Sbjct: 199 VTHGR 203
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 29 QYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTRE 85
Query: 507 NHQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 86 PPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDL 141
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVT 623
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 142 AARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 194
Query: 624 AKVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 195 IKSDVWAFGVLLWEI 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 26 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 83 PFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 138
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 139 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 49 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 106
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 107 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 158
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 159 -----KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 213
Query: 639 IFCKR 643
+ R
Sbjct: 214 VTHGR 218
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 25 QYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTRE 81
Query: 507 NHQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 82 PPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDL 137
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVT 623
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 138 AARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 624 AKVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 191 IKSDVWAFGVLLWEI 205
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
++V VA+K L+ T + FL E ++G+ H N+V L G ++V E M+NG
Sbjct: 70 RDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENG 129
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
L AFL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 130 ALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNI-------LVN 179
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTM--GYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++++ D T G + + APE ++ T+ DV+S+G+++
Sbjct: 180 SNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMW 239
Query: 637 EII 639
E++
Sbjct: 240 EVM 242
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 16/184 (8%)
Query: 461 QEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+EV VA+K L+ + ++ FL E ++G+ H N+++L G + +++ E M+NG
Sbjct: 72 KEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENG 131
Query: 520 TLSAFLFRQEIPTWD--KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXX 577
L FL R++ + + V + GIA G+ YL +H D+ +N+
Sbjct: 132 ALDKFL-REKDGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNI-------LV 180
Query: 578 XXXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVML 635
K++DFGL+++L+ D T T G + + APE + T+ DV+SFG+++
Sbjct: 181 NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM 240
Query: 636 LEII 639
E++
Sbjct: 241 WEVM 244
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 26 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 138
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 139 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 45/285 (15%)
Query: 454 ATNVFDGQ-EVEVAVKQLEKVTGDGEK-SFLREVQVI-GRTHHKNLVQLLGFCIEQNHQL 510
A ++ G+ E VAVK + + E+ FL E V+ G T H ++V+LLG + L
Sbjct: 38 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTL 96
Query: 511 LVYELMKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIH 560
+V ELM +G L ++L R E PT + +++A IA G+ YL+ + + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 153
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMG-----YMAPE 615
D+ +N KI DFG+ + D T +G G +MAPE
Sbjct: 154 RDLAARNCMVAHDFTV-------KIGDFGMTR----DIXETDXXRKGGKGLLPVRWMAPE 202
Query: 616 WLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG 675
L++ T D++SFGV+L EI T L L+N +L + + G L
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEI------TSLAEQPYQGLSNEQVLK----FVMDGGYLD 252
Query: 676 ATKF--ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVPPV 718
ER+T + C P +RP+ +++ +L+ P V
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 27 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 83
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 84 PFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 139
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 140 ARNCLVGENHLV-------KVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 193 KSDVWAFGVLLWEI 206
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 26 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 82
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 83 PFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 138
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 139 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 192 KSDVWAFGVLLWEI 205
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +R V GQE + +K++ + RE ++ H N+V+L E+
Sbjct: 34 AFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE 93
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
H L+++L+ G L + +E + I +L+ H + ++H D+KP+
Sbjct: 94 GHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH---QMGVVHRDLKPE 150
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKV 626
N+ K+ADFGLA ++ +Q + GT GY++PE LR P V
Sbjct: 151 NL----LLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPV 205
Query: 627 DVYSFGVML 635
D+++ GV+L
Sbjct: 206 DLWACGVIL 214
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 45/285 (15%)
Query: 454 ATNVFDGQ-EVEVAVKQLEKVTGDGEK-SFLREVQVI-GRTHHKNLVQLLGFCIEQNHQL 510
A ++ G+ E VAVK + + E+ FL E V+ G T H ++V+LLG + L
Sbjct: 35 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTL 93
Query: 511 LVYELMKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIH 560
+V ELM +G L ++L R E PT + +++A IA G+ YL+ + + +H
Sbjct: 94 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 150
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMG-----YMAPE 615
D+ +N KI DFG+ + D T +G G +MAPE
Sbjct: 151 RDLAARNCMVAHDFTV-------KIGDFGMTR----DIXETDXXRKGGKGLLPVRWMAPE 199
Query: 616 WLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG 675
L++ T D++SFGV+L EI T L L+N +L + + G L
Sbjct: 200 SLKDGVFTTSSDMWSFGVVLWEI------TSLAEQPYQGLSNEQVLK----FVMDGGYLD 249
Query: 676 ATKF--ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVPPV 718
ER+T + C P +RP+ +++ +L+ P V
Sbjct: 250 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 294
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 16/185 (8%)
Query: 461 QEVEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N++ L G + +++ E M+NG
Sbjct: 60 REIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENG 119
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H D+ +N+
Sbjct: 120 SLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNI-------LVN 169
Query: 579 XXXXXKIADFGLAKLLKKDQ---TRTSTM-IRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
K++DFGL++ L+ D T TS + + + + APE ++ T+ DV+S+G++
Sbjct: 170 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIV 229
Query: 635 LLEII 639
+ E++
Sbjct: 230 MWEVM 234
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 31 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 87
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 88 PFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 143
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 144 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 197 KSDVWAFGVLLWEI 210
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 45/285 (15%)
Query: 454 ATNVFDGQ-EVEVAVKQLEKVTGDGEK-SFLREVQVI-GRTHHKNLVQLLGFCIEQNHQL 510
A ++ G+ E VAVK + + E+ FL E V+ G T H ++V+LLG + L
Sbjct: 38 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTL 96
Query: 511 LVYELMKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIH 560
+V ELM +G L ++L R E PT + +++A IA G+ YL+ + + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 153
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMG-----YMAPE 615
D+ +N KI DFG+ + D T +G G +MAPE
Sbjct: 154 RDLAARNCMVAHDFTV-------KIGDFGMTR----DIXETDXXRKGGKGLLPVRWMAPE 202
Query: 616 WLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG 675
L++ T D++SFGV+L EI T L L+N +L + + G L
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEI------TSLAEQPYQGLSNEQVLK----FVMDGGYLD 252
Query: 676 ATKF--ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVPPV 718
ER+T + C P +RP+ +++ +L+ P V
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 39 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 96
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH D++ N+
Sbjct: 97 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSC-- 148
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ + + + + APE + T K DV+SFG++L EI
Sbjct: 149 -----KIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 639 IFCKR 643
+ R
Sbjct: 204 VTHGR 208
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 18/190 (9%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 72 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMA 131
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 132 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 186
Query: 570 XXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDV 628
KI DFG+A+ + + R + +M PE T+K D
Sbjct: 187 ---LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 243
Query: 629 YSFGVMLLEI 638
+SFGV+L EI
Sbjct: 244 WSFGVLLWEI 253
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 18/190 (9%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 49 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 108
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 109 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 163
Query: 570 XXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDV 628
KI DFG+A+ + + R + +M PE T+K D
Sbjct: 164 ---LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 220
Query: 629 YSFGVMLLEI 638
+SFGV+L EI
Sbjct: 221 WSFGVLLWEI 230
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 26/194 (13%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 58 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMA 117
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 118 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 172
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRG-----TMGYMAPEWLRNAPVTA 624
KI DFG+A +D R S +G + +M PE T+
Sbjct: 173 ---LLTCPGPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 225
Query: 625 KVDVYSFGVMLLEI 638
K D +SFGV+L EI
Sbjct: 226 KTDTWSFGVLLWEI 239
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 456 NVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C + ++ E
Sbjct: 30 GVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 88
Query: 516 MKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
M G L +L RQE+ + +A I+ + YL ++ IH D+ +N
Sbjct: 89 MTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGE 144
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ADFGL++L+ D + + + APE L + K DV++FG
Sbjct: 145 NHLV-------KVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 197
Query: 633 VMLLEI 638
V+L EI
Sbjct: 198 VLLWEI 203
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 38 QYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTRE 94
Query: 507 NHQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 95 PPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDL 150
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVT 623
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 151 AARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 624 AKVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 204 IKSDVWAFGVLLWEI 218
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 233 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 289
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH ++
Sbjct: 290 PFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK---NFIHRNLA 345
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 346 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 399 KSDVWAFGVLLWEI 412
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 28 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 85 PFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 140
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 141 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 194 KSDVWAFGVLLWEI 207
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 72 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMA 131
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 132 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 186
Query: 570 XXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDV 628
KI DFG+A+ + + R + +M PE T+K D
Sbjct: 187 ---LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 243
Query: 629 YSFGVMLLEII 639
+SFGV+L EI
Sbjct: 244 WSFGVLLWEIF 254
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 27 QYGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTRE 83
Query: 507 NHQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 84 PPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDL 139
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVT 623
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 140 AARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 624 AKVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 193 IKSDVWAFGVLLWEI 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 45/285 (15%)
Query: 454 ATNVFDGQ-EVEVAVKQLEKVTGDGEK-SFLREVQVI-GRTHHKNLVQLLGFCIEQNHQL 510
A ++ G+ E VAVK + + E+ FL E V+ G T H ++V+LLG + L
Sbjct: 38 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTL 96
Query: 511 LVYELMKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIH 560
+V ELM +G L ++L R E PT + +++A IA G+ YL+ + + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 153
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMG-----YMAPE 615
D+ +N KI DFG+ + D T+ +G G +MAPE
Sbjct: 154 RDLAARNCMVAHDFTV-------KIGDFGMTR----DIYETAYYRKGGKGLLPVRWMAPE 202
Query: 616 WLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG 675
L++ T D++SFGV+L EI T L L+N +L + + G L
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEI------TSLAEQPYQGLSNEQVLK----FVMDGGYLD 252
Query: 676 ATKF--ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVPPV 718
ER+T + C P +RP+ +++ +L+ P V
Sbjct: 253 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 28 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 84
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 85 PFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 140
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 141 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 194 KSDVWAFGVLLWEI 207
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 18/190 (9%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 57 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 116
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 117 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 171
Query: 570 XXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDV 628
KI DFG+A+ + + R + +M PE T+K D
Sbjct: 172 ---LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 228
Query: 629 YSFGVMLLEI 638
+SFGV+L EI
Sbjct: 229 WSFGVLLWEI 238
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 27 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 83
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 84 PFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 139
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 140 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSI 192
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 193 KSDVWAFGVLLWEI 206
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 58 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 117
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 118 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 172
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRG-----TMGYMAPEWLRNAPVTA 624
KI DFG+A +D R S +G + +M PE T+
Sbjct: 173 ---LLTCPGPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 225
Query: 625 KVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKF--ERI 682
K D +SFGV+L EI L + P+ +N +L + G + K +
Sbjct: 226 KTDTWSFGVLLWEIF------SLGYMPYPSKSNQEVLE----FVTSGGRMDPPKNCPGPV 275
Query: 683 TMVGLWCICPQPTLRPSMKQVLQMLE 708
+ C QP RP+ +L+ +E
Sbjct: 276 YRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 18/190 (9%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 57 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMA 116
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 117 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 171
Query: 570 XXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDV 628
KI DFG+A+ + + R + +M PE T+K D
Sbjct: 172 ---LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 228
Query: 629 YSFGVMLLEI 638
+SFGV+L EI
Sbjct: 229 WSFGVLLWEI 238
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 64 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 123
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 124 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 178
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRG-----TMGYMAPEWLRNAPVTA 624
KI DFG+A +D R S +G + +M PE T+
Sbjct: 179 ---LLTCPGPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 231
Query: 625 KVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKF--ERI 682
K D +SFGV+L EI L + P+ +N +L + G + K +
Sbjct: 232 KTDTWSFGVLLWEIF------SLGYMPYPSKSNQEVLE----FVTSGGRMDPPKNCPGPV 281
Query: 683 TMVGLWCICPQPTLRPSMKQVLQMLE 708
+ C QP RP+ +L+ +E
Sbjct: 282 YRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 24 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH D+
Sbjct: 81 PFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKK---NFIHRDLA 136
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 137 ARNCLVGENHLV-------KVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 190 KSDVWAFGVLLWEI 203
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 128/281 (45%), Gaps = 37/281 (13%)
Query: 454 ATNVFDGQ-EVEVAVKQLEKVTGDGEK-SFLREVQVI-GRTHHKNLVQLLGFCIEQNHQL 510
A ++ G+ E VAVK + + E+ FL E V+ G T H ++V+LLG + L
Sbjct: 38 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTL 96
Query: 511 LVYELMKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIH 560
+V ELM +G L ++L R E PT + +++A IA G+ YL+ + + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 153
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRN 619
D+ +N KI DFG+ + + + D R + +MAPE L++
Sbjct: 154 RDLAARNCMVAHDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD 206
Query: 620 APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKF 679
T D++SFGV+L EI T L L+N +L + + G L
Sbjct: 207 GVFTTSSDMWSFGVVLWEI------TSLAEQPYQGLSNEQVLK----FVMDGGYLDQPDN 256
Query: 680 --ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVPPV 718
ER+T + C P +RP+ +++ +L+ P V
Sbjct: 257 CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
Query: 459 DGQEVEVAVKQL-EKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELM 516
DG ++ A+K++ E + D + F E++V+ + HH N++ LLG C + + L E
Sbjct: 46 DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 105
Query: 517 KNGTLSAFLFRQEIPTWD----------------KRVEIALGIARGLLYLHEECETQIIH 560
+G L FL + + D + + A +ARG+ YL ++ Q IH
Sbjct: 106 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIH 162
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620
++ +N+ KIADFGL++ ++ TM R + +MA E L +
Sbjct: 163 RNLAARNI-------LVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYS 213
Query: 621 PVTAKVDVYSFGVMLLEII 639
T DV+S+GV+L EI+
Sbjct: 214 VYTTNSDVWSYGVLLWEIV 232
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 72 DPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 131
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 132 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 186
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRG-----TMGYMAPEWLRNAPVTA 624
KI DFG+A +D R S +G + +M PE T+
Sbjct: 187 ---LLTCPGPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 239
Query: 625 KVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKF--ERI 682
K D +SFGV+L EI L + P+ +N +L + G + K +
Sbjct: 240 KTDTWSFGVLLWEIF------SLGYMPYPSKSNQEVLE----FVTSGGRMDPPKNCPGPV 289
Query: 683 TMVGLWCICPQPTLRPSMKQVLQMLE 708
+ C QP RP+ +L+ +E
Sbjct: 290 YRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVE 538
K F REV + H+N+V ++ E + LV E ++ TLS ++ + D +
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAIN 115
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
I G+ + H+ +I+H DIKPQN+ KI DFG+AK L +
Sbjct: 116 FTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTL-------KIFDFGIAKALSETS 165
Query: 599 TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
+ + GT+ Y +PE + D+YS G++L E++
Sbjct: 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML 206
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 26/194 (13%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 74 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 133
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 134 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 188
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRG-----TMGYMAPEWLRNAPVTA 624
KI DFG+A +D R S +G + +M PE T+
Sbjct: 189 ---LLTCPGPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 241
Query: 625 KVDVYSFGVMLLEI 638
K D +SFGV+L EI
Sbjct: 242 KTDTWSFGVLLWEI 255
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 58 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 117
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 118 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 172
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRG-----TMGYMAPEWLRNAPVTA 624
KI DFG+A +D R S +G + +M PE T+
Sbjct: 173 ---LLTCPGPGRVAKIGDFGMA----QDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 225
Query: 625 KVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKF--ERI 682
K D +SFGV+L EI L + P+ +N +L + G + K +
Sbjct: 226 KTDTWSFGVLLWEIF------SLGYMPYPSKSNQEVLE----FVTSGGRMDPPKNCPGPV 275
Query: 683 TMVGLWCICPQPTLRPSMKQVLQMLE 708
+ C QP RP+ +L+ +E
Sbjct: 276 YRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 98 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 157
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 158 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 212
Query: 570 XXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDV 628
KI DFG+A+ + + R + +M PE T+K D
Sbjct: 213 ---LLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 269
Query: 629 YSFGVMLLEII 639
+SFGV+L EI
Sbjct: 270 WSFGVLLWEIF 280
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ D ++ FL E ++G+ H N++ L G + +++ E M+NG
Sbjct: 56 REICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENG 115
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L AFL + + T + V + GI G+ YL + +H D+ +N+
Sbjct: 116 SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNI-------LVN 165
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFG++++L+ D T G + + APE + T+ DV+S+G+++
Sbjct: 166 SNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMW 225
Query: 637 EII 639
E++
Sbjct: 226 EVM 228
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 18/190 (9%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 75 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 134
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 135 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 189
Query: 570 XXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDV 628
KI DFG+A+ + + R + +M PE T+K D
Sbjct: 190 ---LLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 246
Query: 629 YSFGVMLLEI 638
+SFGV+L EI
Sbjct: 247 WSFGVLLWEI 256
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 15/186 (8%)
Query: 456 NVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C + +V E
Sbjct: 51 GVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEY 109
Query: 516 MKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
M G L +L R+E+ T + +A I+ + YL ++ IH D+ +N
Sbjct: 110 MPYGNLLDYLRECNREEV-TAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGE 165
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ADFGL++L+ D + + + APE L + K DV++FG
Sbjct: 166 NHVV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFG 218
Query: 633 VMLLEI 638
V+L EI
Sbjct: 219 VLLWEI 224
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 20/185 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L++ + + +FL E ++ + H+ LV+L + Q ++ E M+NG+L
Sbjct: 35 KVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 92
Query: 524 FLFRQEIP-----TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL + P T +K +++A IA G+ ++ E IH +++ N+
Sbjct: 93 FL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRNLRAANILVSDTLSC-- 144
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 145 -----KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 199
Query: 639 IFCKR 643
+ R
Sbjct: 200 VTHGR 204
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 26/194 (13%)
Query: 459 DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517
D ++VAVK L +V + E FL E +I + +H+N+V+ +G ++ + ++ ELM
Sbjct: 84 DPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 143
Query: 518 NGTLSAFLFRQEIPTWDKR--------VEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
G L +FL R+ P + + +A IA G YL E IH DI +N
Sbjct: 144 GGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNC- 198
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRG-----TMGYMAPEWLRNAPVTA 624
KI DFG+A +D R S +G + +M PE T+
Sbjct: 199 ---LLTCPGPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS 251
Query: 625 KVDVYSFGVMLLEI 638
K D +SFGV+L EI
Sbjct: 252 KTDTWSFGVLLWEI 265
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ D ++ FL E ++G+ H N++ L G + +++ E M+NG
Sbjct: 35 REICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENG 94
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L AFL + + T + V + GI G+ YL + +H D+ +N+
Sbjct: 95 SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNI-------LVN 144
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFG++++L+ D T G + + APE + T+ DV+S+G+++
Sbjct: 145 SNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMW 204
Query: 637 EII 639
E++
Sbjct: 205 EVM 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ D ++ FL E ++G+ H N++ L G + +++ E M+NG
Sbjct: 41 REICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENG 100
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L AFL + + T + V + GI G+ YL + +H D+ +N+
Sbjct: 101 SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNI-------LVN 150
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFG++++L+ D T G + + APE + T+ DV+S+G+++
Sbjct: 151 SNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMW 210
Query: 637 EII 639
E++
Sbjct: 211 EVM 213
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 128/281 (45%), Gaps = 37/281 (13%)
Query: 454 ATNVFDGQ-EVEVAVKQLEKVTGDGEK-SFLREVQVI-GRTHHKNLVQLLGFCIEQNHQL 510
A ++ G+ E VAVK + + E+ FL E V+ G T H ++V+LLG + L
Sbjct: 37 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTL 95
Query: 511 LVYELMKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIH 560
+V ELM +G L ++L R E PT + +++A IA G+ YL+ + + +H
Sbjct: 96 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 152
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRN 619
D+ +N KI DFG+ + + + D R + +MAPE L++
Sbjct: 153 RDLAARNCMVAHDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD 205
Query: 620 APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKF 679
T D++SFGV+L EI T L L+N +L + + G L
Sbjct: 206 GVFTTSSDMWSFGVVLWEI------TSLAEQPYQGLSNEQVLK----FVMDGGYLDQPDN 255
Query: 680 --ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVPPV 718
ER+T + C P +RP+ +++ +L+ P V
Sbjct: 256 CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 296
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +R V GQE + +K++ + RE ++ H N+V+L E+
Sbjct: 23 AFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE 82
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
H L+++L+ G L + +E + I +L+ H + ++H ++KP+
Sbjct: 83 GHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPE 139
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKV 626
N+ K+ADFGLA ++ +Q + GT GY++PE LR P V
Sbjct: 140 NL----LLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPV 194
Query: 627 DVYSFGVML 635
D+++ GV+L
Sbjct: 195 DLWACGVIL 203
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 272 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 328
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH ++
Sbjct: 329 PFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRNLA 384
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 385 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 438 KSDVWAFGVLLWEI 451
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
Y E+ E V+ + VAVK L++ T + E+ FL+E V+ H NLVQLLG C +
Sbjct: 230 YGEVYEG--VWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREP 286
Query: 508 HQLLVYELMKNGTLSAFLF---RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ E M G L +L RQE+ + +A I+ + YL ++ IH ++
Sbjct: 287 PFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKK---NFIHRNLA 342
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N K+ADFGL++L+ D + + + APE L +
Sbjct: 343 ARNCLVGENHLV-------KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV+L EI
Sbjct: 396 KSDVWAFGVLLWEI 409
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
++V VA+K L+ T + FL E ++G+ H N+++L G ++V E M+NG
Sbjct: 76 RDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L FL + T + V + G+ G+ YL + +H D+ +NV
Sbjct: 136 SLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNV-------LVD 185
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + APE + ++ DV+SFGV++
Sbjct: 186 SNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 637 EII 639
E++
Sbjct: 246 EVL 248
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 294 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDF 351
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E + + V++A IA G+ Y+ +H D++ N+
Sbjct: 352 L-KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 402
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 403 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 457
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 458 ---TTKGRVPYPGMVNREVL 474
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 128/281 (45%), Gaps = 37/281 (13%)
Query: 454 ATNVFDGQ-EVEVAVKQLEKVTGDGEK-SFLREVQVI-GRTHHKNLVQLLGFCIEQNHQL 510
A ++ G+ E VAVK + + E+ FL E V+ G T H ++V+LLG + L
Sbjct: 38 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTL 96
Query: 511 LVYELMKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIH 560
+V ELM +G L ++L R E PT + +++A IA G+ YL+ + + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 153
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRN 619
++ +N KI DFG+ + + + D R + +MAPE L++
Sbjct: 154 RNLAARNCMVAHDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD 206
Query: 620 APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKF 679
T D++SFGV+L EI T L L+N +L + + G L
Sbjct: 207 GVFTTSSDMWSFGVVLWEI------TSLAEQPYQGLSNEQVLK----FVMDGGYLDQPDN 256
Query: 680 --ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVPPV 718
ER+T + C P +RP+ +++ +L+ P V
Sbjct: 257 CPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL E+ +++ E M G+L F
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDF 102
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E+ + + V++A IA G+ Y+ +H D++ N+
Sbjct: 103 L-KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 153
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 154 --KVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 208
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 209 ---TTKGRVPYPGMVNREVL 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 128/281 (45%), Gaps = 37/281 (13%)
Query: 454 ATNVFDGQ-EVEVAVKQLEKVTGDGEK-SFLREVQVI-GRTHHKNLVQLLGFCIEQNHQL 510
A ++ G+ E VAVK + + E+ FL E V+ G T H ++V+LLG + L
Sbjct: 39 ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTL 97
Query: 511 LVYELMKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIH 560
+V ELM +G L ++L R E PT + +++A IA G+ YL+ + + +H
Sbjct: 98 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVH 154
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRN 619
++ +N KI DFG+ + + + D R + +MAPE L++
Sbjct: 155 RNLAARNCMVAHDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD 207
Query: 620 APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKF 679
T D++SFGV+L EI T L L+N +L + + G L
Sbjct: 208 GVFTTSSDMWSFGVVLWEI------TSLAEQPYQGLSNEQVLK----FVMDGGYLDQPDN 257
Query: 680 --ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVPPV 718
ER+T + C P +RP+ +++ +L+ P V
Sbjct: 258 CPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEV 298
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 34 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDF 91
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E+ + + V++A IA G+ Y+ +H D++ N+
Sbjct: 92 L-KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 142
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 143 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 197
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 198 ---TTKGRVPYPGMVNREVL 214
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N++ L G + ++V E M+NG
Sbjct: 49 RELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENG 108
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L FL + + T + V + GI+ G+ YL + +H D+ +N+
Sbjct: 109 SLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNI-------LIN 158
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + APE + T+ DV+S+G+++
Sbjct: 159 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMW 218
Query: 637 EII 639
E++
Sbjct: 219 EVV 221
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 36 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDF 93
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E+ + + V++A IA G+ Y+ +H D++ N+
Sbjct: 94 L-KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 144
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 145 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 199
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 200 ---TTKGRVPYPGMVNREVL 216
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+V +A+K++ + + E+ + HKN+VQ LG E + E + G+L
Sbjct: 33 QVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 92
Query: 522 SAFLFRQEIPTWDKRVEIAL---GIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
SA L + P D I I GL YLH + QI+H DIK NV
Sbjct: 93 SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNV------LINT 143
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP--VTAKVDVYSFGVMLL 636
KI+DFG +K L T T GT+ YMAPE + P D++S G ++
Sbjct: 144 YSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGPRGYGKAADIWSLGCTII 202
Query: 637 EIIFCKRHTELHRVDEPTLA 656
E+ K + + EP A
Sbjct: 203 EMATGK--PPFYELGEPQAA 220
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 211 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDF 268
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E + + V++A IA G+ Y+ +H D++ N+
Sbjct: 269 L-KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 319
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 320 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 374
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 375 ---TTKGRVPYPGMVNREVL 391
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 211 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDF 268
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E + + V++A IA G+ Y+ +H D++ N+
Sbjct: 269 L-KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 319
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 320 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 374
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 375 ---TTKGRVPYPGMVNREVL 391
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+V +A+K++ + + E+ + HKN+VQ LG E + E + G+L
Sbjct: 47 QVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106
Query: 522 SAFLFRQEIPTWDKRVEIAL---GIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
SA L + P D I I GL YLH + QI+H DIK NV
Sbjct: 107 SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNV------LINT 157
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP--VTAKVDVYSFGVMLL 636
KI+DFG +K L T T GT+ YMAPE + P D++S G ++
Sbjct: 158 YSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEIIDKGPRGYGKAADIWSLGCTII 216
Query: 637 EIIFCKRHTELHRVDEPTLA 656
E+ K + + EP A
Sbjct: 217 EMATGK--PPFYELGEPQAA 234
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 461 QEVEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
++V VA+K L+ T + FL E ++G+ H N+++L G ++V E M+NG
Sbjct: 76 RDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L FL + T + V + G+ G+ YL + +H D+ +NV
Sbjct: 136 SLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNV-------LVD 185
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
K++DFGL+++L+ D T G + + APE + ++ DV+SFGV++
Sbjct: 186 SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 637 EII 639
E++
Sbjct: 246 EVL 248
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL E+ +++ E M G+L F
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDF 102
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E+ + + V++A IA G+ Y+ +H D++ N+
Sbjct: 103 L-KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 153
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 154 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 208
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 209 ---TTKGRVPYPGMVNREVL 225
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDF 102
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E+ + + V++A IA G+ Y+ +H D++ N+
Sbjct: 103 L-KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 153
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 154 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 208
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 209 ---TTKGRVPYPGMVNREVL 225
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 440 EINMKVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQ 498
+I + ++ +R+ ++++VA+K L++ T + + +RE Q++ + + +V+
Sbjct: 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 499 LLGFCIEQNHQLLVYELMKNGTLSAFLF--RQEIPTWDKRVEIALGIARGLLYLHEECET 556
L+G C + +LV E+ G L FL R+EIP E+ ++ G+ YL E+
Sbjct: 75 LIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV-SNVAELLHQVSMGMKYLEEK--- 129
Query: 557 QIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAP 614
+H D+ +NV KI+DFGL+K L D + + G + + AP
Sbjct: 130 NFVHRDLAARNVLLVNRHYA-------KISDFGLSKALGADDSYYTARSAGKWPLKWYAP 182
Query: 615 EWLRNAPVTAKVDVYSFGVMLLEII 639
E + +++ DV+S+GV + E +
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEAL 207
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVKQL+ D ++ F RE+Q++ H +V+ G Q LV E + +G L
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 523 AFLFRQEIPTWDKRVEI-ALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
FL R R+ + + I +G+ YL + +H D+ +N+
Sbjct: 102 DFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNI-------LVESEA 151
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KIADFGLAKLL D+ G + + APE L + + + DV+SFGV+L E+
Sbjct: 152 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
Query: 640 -FCKR 643
+C +
Sbjct: 212 TYCDK 216
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE 505
F EL + D VAVKQL+ D ++ F RE+Q++ H +V+ G
Sbjct: 24 FGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG 83
Query: 506 QNHQ--LLVYELMKNGTLSAFLFRQEIPTWDKRVEI-ALGIARGLLYLHEECETQIIHCD 562
Q LV E + +G L FL R R+ + + I +G+ YL + +H D
Sbjct: 84 PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRD 140
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNA 620
+ +N+ KIADFGLAKLL D+ G + + APE L +
Sbjct: 141 LAARNI-------LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 193
Query: 621 PVTAKVDVYSFGVMLLEII-FCKR 643
+ + DV+SFGV+L E+ +C +
Sbjct: 194 IFSRQSDVWSFGVVLYELFTYCDK 217
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDF 102
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E+ + + V++A IA G+ Y+ +H D++ N+
Sbjct: 103 L-KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 153
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 154 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 208
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 209 ---TTKGRVPYPGMVNREVL 225
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 211 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDF 268
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E + + V++A IA G+ Y+ +H D++ N+
Sbjct: 269 L-KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 319
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 320 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 374
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 375 ---TTKGRVPYPGMVNREVL 391
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL E+ + V E M G+L F
Sbjct: 35 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSEEPIXI-VTEYMSKGSLLDF 92
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E + + V++A IA G+ Y+ +H D++ N+
Sbjct: 93 L-KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 143
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 144 --KVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 198
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 199 ---TTKGRVPYPGMVNREVL 215
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVKQL+ D ++ F RE+Q++ H +V+ G Q LV E + +G L
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 523 AFLFRQEIPTWDKRVEI-ALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
FL R R+ + + I +G+ YL + +H D+ +N+
Sbjct: 115 DFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNI-------LVESEA 164
Query: 582 XXKIADFGLAKL--LKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KIADFGLAKL L KD + + + APE L + + + DV+SFGV+L E+
Sbjct: 165 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
Query: 640 -FCKR 643
+C +
Sbjct: 225 TYCDK 229
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 47/226 (20%)
Query: 464 EVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E G
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 520 TLSAFLFRQEIPTWD----------------KRVEIALGIARGLLYLHEECETQIIHCDI 563
L +L +E P + V A +ARG+ YL + IH D+
Sbjct: 120 NLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRNAPV 622
+NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 177 AARNV-------LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 229
Query: 623 TAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV+L EI K E HR+D+P+
Sbjct: 230 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 275
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLDF 102
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E+ + + V++A IA G+ Y+ +H D++ N+
Sbjct: 103 L-KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 153
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 154 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 208
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 209 ---TTKGRVPYPGMVNREVL 225
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 38 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDF 95
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E + + V++A IA G+ Y+ +H D++ N+
Sbjct: 96 L-KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 146
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 147 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 201
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 202 ---TTKGRVPYPGMVNREVL 218
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 16/185 (8%)
Query: 461 QEVEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E+ VA+K L+ T + FL E ++G+ H N++ L G + +++ E M+NG
Sbjct: 34 REIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENG 93
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+L +FL + + T + V + GIA G+ YL + +H + +N+
Sbjct: 94 SLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNI-------LVN 143
Query: 579 XXXXXKIADFGLAKLLKKDQ---TRTSTM-IRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
K++DFGL++ L+ D T TS + + + + APE ++ T+ DV+S+G++
Sbjct: 144 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIV 203
Query: 635 LLEII 639
+ E++
Sbjct: 204 MWEVM 208
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G L F
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLDF 102
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E+ + + V++A IA G+ Y+ +H D++ N+
Sbjct: 103 L-KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 153
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 154 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 208
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 209 ---TTKGRVPYPGMVNREVL 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 440 EINMKVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQ 498
+I + ++ +R+ ++++VA+K L++ T + + +RE Q++ + + +V+
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 499 LLGFCIEQNHQLLVYELMKNGTLSAFLF--RQEIPTWDKRVEIALGIARGLLYLHEECET 556
L+G C + +LV E+ G L FL R+EIP E+ ++ G+ YL E+
Sbjct: 401 LIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV-SNVAELLHQVSMGMKYLEEK--- 455
Query: 557 QIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAP 614
+H ++ +NV KI+DFGL+K L D + + G + + AP
Sbjct: 456 NFVHRNLAARNVLLVNRHYA-------KISDFGLSKALGADDSYYTARSAGKWPLKWYAP 508
Query: 615 EWLRNAPVTAKVDVYSFGVMLLEII 639
E + +++ DV+S+GV + E +
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEAL 533
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 440 EINMKVFSYQELREATNVFDGQE-VEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQ 498
E+ F L E N+ Q+ + VAVK L++ + + F RE +++ H+++V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 499 LLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPT----------------WDKRVEIALG 542
G C E L+V+E M++G L+ FL R P + + +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRT 601
+A G++YL +H D+ +N KI DFG+++ + D R
Sbjct: 167 VAAGMVYL---AGLHFVHRDLATRNC-------LVGQGLVVKIGDFGMSRDIYSTDYYRV 216
Query: 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
+ +M PE + T + DV+SFGV+L EI
Sbjct: 217 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G L F
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLDF 102
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E+ + + V++A IA G+ Y+ +H D++ N+
Sbjct: 103 L-KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 153
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 154 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 208
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 209 ---TTKGRVPYPGMVNREVL 225
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 440 EINMKVFSYQELREATNVFDGQE-VEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQ 498
E+ F L E N+ Q+ + VAVK L++ + + F RE +++ H+++V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 499 LLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPT----------------WDKRVEIALG 542
G C E L+V+E M++G L+ FL R P + + +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRT 601
+A G++YL +H D+ +N KI DFG+++ + D R
Sbjct: 144 VAAGMVYL---AGLHFVHRDLATRNC-------LVGQGLVVKIGDFGMSRDIYSTDYYRV 193
Query: 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
+ +M PE + T + DV+SFGV+L EI
Sbjct: 194 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 231
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 20/181 (11%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VA+K L+ T E SFL E Q++ + H LVQL + + +V E M G+L
Sbjct: 35 KVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYA-VVSEEPIYIVTEYMNKGSLLD 92
Query: 524 FLFRQE-----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL E +P V++A +A G+ Y+ IH D++ N+
Sbjct: 93 FLKDGEGRALKLPNL---VDMAAQVAAGMAYIER---MNYIHRDLRSANILVGNGLIC-- 144
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 145 -----KIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 639 I 639
+
Sbjct: 200 V 200
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 440 EINMKVFSYQELREATNVFDGQE-VEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQ 498
E+ F L E N+ Q+ + VAVK L++ + + F RE +++ H+++V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 499 LLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPT----------------WDKRVEIALG 542
G C E L+V+E M++G L+ FL R P + + +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRT 601
+A G++YL +H D+ +N KI DFG+++ + D R
Sbjct: 138 VAAGMVYL---AGLHFVHRDLATRNC-------LVGQGLVVKIGDFGMSRDIYSTDYYRV 187
Query: 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
+ +M PE + T + DV+SFGV+L EI
Sbjct: 188 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 225
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 45 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDF 102
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E+ + + V++A IA G+ Y+ +H D+ N+
Sbjct: 103 L-KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGENLVC----- 153
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 154 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 208
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 209 ---TTKGRVPYPGMVNREVL 225
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ +VA+K + K E F+ E +V+ H+ LVQL G C +Q ++ E M NG L
Sbjct: 48 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106
Query: 522 SAFL--FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
+L R T + +E+ + + YL + Q +H D+ +N
Sbjct: 107 LNYLREMRHRFQT-QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVV--- 159
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
K++DFGL++ + D+ +S + + + PE L + ++K D+++FGV++ EI
Sbjct: 160 ----KVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFRQ--EIPTWDK 535
++FL E V+ + H NLVQLLG +E+ L +V E M G+L +L + + D
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 109
Query: 536 RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK 595
++ +L + + YL +H D+ +NV K++DFGL K
Sbjct: 110 LLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVA-------KVSDFGLTK--- 156
Query: 596 KDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ + T + + + APE LR A + K DV+SFG++L EI
Sbjct: 157 -EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 30/198 (15%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V D E VA+K + + E+ FL E V+ + ++V+LLG + L++ EL
Sbjct: 44 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 103
Query: 516 MKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
M G L ++L R E+ P+ K +++A IA G+ YL+ + +H D+
Sbjct: 104 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 160
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMG-----YMAPEWLRNA 620
+N KI DFG+ + D T +G G +M+PE L++
Sbjct: 161 RNCMVAEDFTV-------KIGDFGMTR----DIXETDXXRKGGKGLLPVRWMSPESLKDG 209
Query: 621 PVTAKVDVYSFGVMLLEI 638
T DV+SFGV+L EI
Sbjct: 210 VFTTYSDVWSFGVVLWEI 227
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ +VA+K + K E F+ E +V+ H+ LVQL G C +Q ++ E M NG L
Sbjct: 48 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106
Query: 522 SAFL--FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
+L R T + +E+ + + YL + Q +H D+ +N
Sbjct: 107 LNYLREMRHRFQT-QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC-------LVND 155
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
K++DFGL++ + D+ +S + + + PE L + ++K D+++FGV++ EI
Sbjct: 156 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L+ T + +FL E ++ H LV+L + ++ E M G+L
Sbjct: 39 KVAVKTLKPGTMSVQ-AFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLD 97
Query: 524 FLFRQE-----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL E +P K ++ + IA G+ Y+ + IH D++ NV
Sbjct: 98 FLKSDEGGKVLLP---KLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMC-- 149
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA++++ ++ + + + APE + T K DV+SFG++L EI
Sbjct: 150 -----KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
Query: 639 I 639
+
Sbjct: 205 V 205
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 30/198 (15%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V D E VA+K + + E+ FL E V+ + ++V+LLG + L++ EL
Sbjct: 35 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 94
Query: 516 MKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
M G L ++L R E+ P+ K +++A IA G+ YL+ + +H D+
Sbjct: 95 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 151
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMG-----YMAPEWLRNA 620
+N KI DFG+ + D T +G G +M+PE L++
Sbjct: 152 RNCMVAEDFTV-------KIGDFGMTR----DIXETDXXRKGGKGLLPVRWMSPESLKDG 200
Query: 621 PVTAKVDVYSFGVMLLEI 638
T DV+SFGV+L EI
Sbjct: 201 VFTTYSDVWSFGVVLWEI 218
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V D E VA+K + + E+ FL E V+ + ++V+LLG + L++ EL
Sbjct: 50 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109
Query: 516 MKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
M G L ++L R E+ P+ K +++A IA G+ YL+ + +H D+
Sbjct: 110 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 166
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N KI DFG+ + + + D R + +M+PE L++ T
Sbjct: 167 RNCMVAEDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 219
Query: 625 KVDVYSFGVMLLEIIFCKRHTELHRVDEPTL---ANGMILTDWVLYCVRTGNLGATKFER 681
DV+SFGV+L EI +E L G +L + N FE
Sbjct: 220 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD-------KPDNCPDMLFEL 272
Query: 682 ITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVG 714
+ M C P +RPS +++ ++ E G
Sbjct: 273 MRM----CWQYNPKMRPSFLEIISSIKEEMEPG 301
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 47/226 (20%)
Query: 464 EVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E G
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 520 TLSAFLFRQEIPTWD----------------KRVEIALGIARGLLYLHEECETQIIHCDI 563
L +L + P + V A +ARG+ YL + IH D+
Sbjct: 120 NLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRNAPV 622
+NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 177 AARNVLVTEDNVM-------KIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIY 229
Query: 623 TAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV+L EI K E HR+D+P+
Sbjct: 230 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 275
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ +VA+K + K E F+ E +V+ H+ LVQL G C +Q ++ E M NG L
Sbjct: 39 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 97
Query: 522 SAFL--FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
+L R T + +E+ + + YL + Q +H D+ +N
Sbjct: 98 LNYLREMRHRFQT-QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC-------LVND 146
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
K++DFGL++ + D+ +S + + + PE L + ++K D+++FGV++ EI
Sbjct: 147 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 205
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ +VA+K + K E F+ E +V+ H+ LVQL G C +Q ++ E M NG L
Sbjct: 32 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 90
Query: 522 SAFL--FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
+L R T + +E+ + + YL + Q +H D+ +N
Sbjct: 91 LNYLREMRHRFQT-QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC-------LVND 139
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
K++DFGL++ + D+ +S + + + PE L + ++K D+++FGV++ EI
Sbjct: 140 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 198
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYA 123
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + + IH
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 181 RDLAARNVLVTENNVM-------KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFD 233
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYA 123
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + + IH
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 181 RDLAARNVLVTENNVM-------KIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFD 233
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLG--FC 503
F EL + D VAVKQL+ D ++ F RE+Q++ H +V+ G +
Sbjct: 20 FGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG 79
Query: 504 IEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEI-ALGIARGLLYLHEECETQIIHCD 562
+ LV E + +G L FL R R+ + + I +G+ YL + +H D
Sbjct: 80 PGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRD 136
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNA 620
+ +N+ KIADFGLAKLL D+ G + + APE L +
Sbjct: 137 LAARNI-------LVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 621 PVTAKVDVYSFGVMLLEII-FCKR 643
+ + DV+SFGV+L E+ +C +
Sbjct: 190 IFSRQSDVWSFGVVLYELFTYCDK 213
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E
Sbjct: 58 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYA 115
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + + IH
Sbjct: 116 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 172
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 173 RDLAARNVLVTENNVM-------KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD 225
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 226 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 274
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ +VA+K + K E F+ E +V+ H+ LVQL G C +Q ++ E M NG L
Sbjct: 33 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 91
Query: 522 SAFL--FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
+L R T + +E+ + + YL + Q +H D+ +N
Sbjct: 92 LNYLREMRHRFQT-QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC-------LVND 140
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
K++DFGL++ + D+ +S + + + PE L + ++K D+++FGV++ EI
Sbjct: 141 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ +VA+K + K E F+ E +V+ H+ LVQL G C +Q ++ E M NG L
Sbjct: 33 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 91
Query: 522 SAFL--FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
+L R T + +E+ + + YL + Q +H D+ +N
Sbjct: 92 LNYLREMRHRFQT-QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC-------LVND 140
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
K++DFGL++ + D+ +S + + + PE L + ++K D+++FGV++ EI
Sbjct: 141 QGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYA 123
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + + IH
Sbjct: 124 SKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 181 RDLAARNVLVTENNVM-------KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFD 233
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 47/226 (20%)
Query: 464 EVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E G
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKG 160
Query: 520 TLSAFLFRQEIPTWDKR----------------VEIALGIARGLLYLHEECETQIIHCDI 563
L +L + P + V A +ARG+ YL + IH D+
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 217
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRNAPV 622
+NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 218 AARNVLVTEDNVM-------KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 270
Query: 623 TAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV+L EI K E HR+D+P+
Sbjct: 271 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 47/229 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIIHLLGACTQDGPLYVIVEYA 123
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + IH
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIH 180
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 181 RDLAARNVLVTENNVM-------KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD 233
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ +VA+K + K E F+ E +V+ H+ LVQL G C +Q ++ E M NG L
Sbjct: 28 QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 86
Query: 522 SAFL--FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
+L R T + +E+ + + YL + Q +H D+ +N
Sbjct: 87 LNYLREMRHRFQT-QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNC-------LVND 135
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
K++DFGL++ + D+ +S + + + PE L + ++K D+++FGV++ EI
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 194
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 42 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDF 99
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E + + V+++ IA G+ Y+ +H D++ N+
Sbjct: 100 L-KGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 150
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 151 --KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 205
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 206 ---TTKGRVPYPGMVNREVL 222
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E
Sbjct: 55 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYA 112
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + + IH
Sbjct: 113 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 169
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 170 RDLAARNVLVTENNVM-------KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD 222
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 223 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 271
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V D E VA+K + + E+ FL E V+ + ++V+LLG + L++ EL
Sbjct: 44 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 103
Query: 516 MKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
M G L ++L R E+ P+ K +++A IA G+ YL+ + +H D+
Sbjct: 104 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 160
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N KI DFG+ + + + D R + +M+PE L++ T
Sbjct: 161 RNCMVAEDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 213
Query: 625 KVDVYSFGVMLLEIIFCKRHTELHRVDEPTL---ANGMILTDWVLYCVRTGNLGATKFER 681
DV+SFGV+L EI +E L G +L + N FE
Sbjct: 214 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD-------KPDNCPDMLFEL 266
Query: 682 ITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVPPV 718
+ M C P +RPS +++ ++ E G V
Sbjct: 267 MRM----CWQYNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 100/228 (43%), Gaps = 47/228 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E
Sbjct: 112 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYA 169
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + + IH
Sbjct: 170 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 226
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 227 RDLAARNVLVTENNVM-------KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD 279
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEP 653
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 280 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 327
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V D E VA+K + + E+ FL E V+ + ++V+LLG + L++ EL
Sbjct: 72 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 131
Query: 516 MKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
M G L ++L R E+ P+ K +++A IA G+ YL+ + +H D+
Sbjct: 132 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 188
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N KI DFG+ + + + D R + +M+PE L++ T
Sbjct: 189 RNCMVAEDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 241
Query: 625 KVDVYSFGVMLLEIIFCKRHTELHRVDEPTL---ANGMILTDWVLYCVRTGNLGATKFER 681
DV+SFGV+L EI +E L G +L + N FE
Sbjct: 242 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD-------KPDNCPDMLFEL 294
Query: 682 ITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVPPV 718
+ M C P +RPS +++ ++ E G V
Sbjct: 295 MRM----CWQYNPKMRPSFLEIISSIKEEMEPGFREV 327
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V D E VA+K + + E+ FL E V+ + ++V+LLG + L++ EL
Sbjct: 43 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 102
Query: 516 MKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
M G L ++L R E+ P+ K +++A IA G+ YL+ + +H D+
Sbjct: 103 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 159
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N KI DFG+ + + + D R + +M+PE L++ T
Sbjct: 160 RNCMVAEDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 212
Query: 625 KVDVYSFGVMLLEIIFCKRHTELHRVDEPTL---ANGMILTDWVLYCVRTGNLGATKFER 681
DV+SFGV+L EI +E L G +L + N FE
Sbjct: 213 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD-------KPDNCPDMLFEL 265
Query: 682 ITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVG 714
+ M C P +RPS +++ ++ E G
Sbjct: 266 MRM----CWQYNPKMRPSFLEIISSIKEEMEPG 294
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E
Sbjct: 53 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYA 110
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + + IH
Sbjct: 111 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 167
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 168 RDLTARNVLVTENNVM-------KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD 220
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 221 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 269
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V D E VA+K + + E+ FL E V+ + ++V+LLG + L++ EL
Sbjct: 41 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 100
Query: 516 MKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
M G L ++L R E+ P+ K +++A IA G+ YL+ + +H D+
Sbjct: 101 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 157
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N KI DFG+ + + + D R + +M+PE L++ T
Sbjct: 158 RNCMVAEDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 210
Query: 625 KVDVYSFGVMLLEIIFCKRHTELHRVDEPTL---ANGMILTDWVLYCVRTGNLGATKFER 681
DV+SFGV+L EI +E L G +L + N FE
Sbjct: 211 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD-------KPDNCPDMLFEL 263
Query: 682 ITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVG 714
+ M C P +RPS +++ ++ E G
Sbjct: 264 MRM----CWQYNPKMRPSFLEIISSIKEEMEPG 292
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L K ++FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 212 VAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDF 269
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E+ + + V++A IA G+ Y+ +H D++ N+
Sbjct: 270 L-KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 320
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGL +L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 321 --KVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 375
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 376 ---TTKGRVPYPGMVNREVL 392
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 47/226 (20%)
Query: 464 EVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E G
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 520 TLSAFLFRQEIPTWD----------------KRVEIALGIARGLLYLHEECETQIIHCDI 563
L +L + P + V A +ARG+ YL + IH D+
Sbjct: 120 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRNAPV 622
+NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 177 AARNVLVTEDNVM-------KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 229
Query: 623 TAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV+L EI K E HR+D+P+
Sbjct: 230 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 275
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 47/226 (20%)
Query: 464 EVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E G
Sbjct: 51 KVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKG 108
Query: 520 TLSAFLFRQEIPTWDKR----------------VEIALGIARGLLYLHEECETQIIHCDI 563
L +L + P + V A +ARG+ YL + IH D+
Sbjct: 109 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 165
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRNAPV 622
+NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 166 AARNVLVTEDNVM-------KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 218
Query: 623 TAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV+L EI K E HR+D+P+
Sbjct: 219 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 264
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E
Sbjct: 66 EAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYA 123
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + + IH
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 181 RDLAARNVLVTENNVM-------KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD 233
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V D E VA+K + + E+ FL E V+ + ++V+LLG + L++ EL
Sbjct: 43 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 102
Query: 516 MKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
M G L ++L R E+ P+ K +++A IA G+ YL+ + +H D+
Sbjct: 103 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 159
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N KI DFG+ + + + D R + +M+PE L++ T
Sbjct: 160 RNCMVAEDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 212
Query: 625 KVDVYSFGVMLLEIIFCKRHTELHRVDEPTL---ANGMILTDWVLYCVRTGNLGATKFER 681
DV+SFGV+L EI +E L G +L + N FE
Sbjct: 213 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD-------KPDNCPDMLFEL 265
Query: 682 ITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVG 714
+ M C P +RPS +++ ++ E G
Sbjct: 266 MRM----CWQYNPKMRPSFLEIISSIKEEMEPG 294
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VA+K L+ T E +FL+E QV+ + H+ LVQL + + +V E M G+L F
Sbjct: 42 VAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDF 99
Query: 525 LFRQEIPTW---DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
L + E + + V+++ IA G+ Y+ +H D++ N+
Sbjct: 100 L-KGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVC----- 150
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
K+ADFGLA+L++ ++ + + + APE T K DV+SFG++L E+
Sbjct: 151 --KVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL--- 205
Query: 642 KRHTELHRVDEPTLANGMIL 661
T RV P + N +L
Sbjct: 206 ---TTKGRVPYPGMVNREVL 222
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 47/226 (20%)
Query: 464 EVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E G
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKG 119
Query: 520 TLSAFLFRQEIPTWDKR----------------VEIALGIARGLLYLHEECETQIIHCDI 563
L +L + P + V A +ARG+ YL + IH D+
Sbjct: 120 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRNAPV 622
+NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 177 AARNVLVTEDNVM-------KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 229
Query: 623 TAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV+L EI K E HR+D+P+
Sbjct: 230 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 275
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 47/226 (20%)
Query: 464 EVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E G
Sbjct: 54 KVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKG 111
Query: 520 TLSAFLFRQEIPTWDKR----------------VEIALGIARGLLYLHEECETQIIHCDI 563
L +L + P + V A +ARG+ YL + IH D+
Sbjct: 112 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 168
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRNAPV 622
+NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 169 AARNVLVTEDNVM-------KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 221
Query: 623 TAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV+L EI K E HR+D+P+
Sbjct: 222 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 267
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 22/194 (11%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V D E VA+K + + E+ FL E V+ + ++V+LLG + L++ EL
Sbjct: 37 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 96
Query: 516 MKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
M G L ++L R E+ P+ K +++A IA G+ YL+ + +H D+
Sbjct: 97 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 153
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N KI DFG+ + + + D R + +M+PE L++ T
Sbjct: 154 RNCMVAEDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 206
Query: 625 KVDVYSFGVMLLEI 638
DV+SFGV+L EI
Sbjct: 207 YSDVWSFGVVLWEI 220
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 47/226 (20%)
Query: 464 EVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E G
Sbjct: 55 KVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKG 112
Query: 520 TLSAFLFRQEIPTWDKR----------------VEIALGIARGLLYLHEECETQIIHCDI 563
L +L + P + V A +ARG+ YL + IH D+
Sbjct: 113 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 169
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRNAPV 622
+NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 170 AARNVLVTEDNVM-------KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 222
Query: 623 TAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV+L EI K E HR+D+P+
Sbjct: 223 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 268
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V D E VA+K + + E+ FL E V+ + ++V+LLG + L++ EL
Sbjct: 37 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 96
Query: 516 MKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
M G L ++L R E+ P+ K +++A IA G+ YL+ + +H D+
Sbjct: 97 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 153
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N KI DFG+ + + + D R + +M+PE L++ T
Sbjct: 154 RNCXVAEDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 206
Query: 625 KVDVYSFGVMLLEI 638
DV+SFGV+L EI
Sbjct: 207 YSDVWSFGVVLWEI 220
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 47/226 (20%)
Query: 464 EVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E G
Sbjct: 47 KVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKG 104
Query: 520 TLSAFLFRQEIPTWD----------------KRVEIALGIARGLLYLHEECETQIIHCDI 563
L +L + P + V A +ARG+ YL + IH D+
Sbjct: 105 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 161
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRNAPV 622
+NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 162 AARNVLVTEDNVM-------KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY 214
Query: 623 TAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV+L EI K E HR+D+P+
Sbjct: 215 THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 260
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIITLLGACTQDGPLYVIVEYA 123
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + + IH
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 181 RDLAARNVLVTENNVM-------KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD 233
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 19/181 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK L+ T + +FL E ++ H LV+L ++ ++ E M G+L
Sbjct: 38 KVAVKTLKPGTMSVQ-AFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLD 96
Query: 524 FLFRQE-----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
FL E +P K ++ + IA G+ Y+ + IH D++ NV
Sbjct: 97 FLKSDEGGKVLLP---KLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMC-- 148
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGLA++++ ++ + + + APE + T K +V+SFG++L EI
Sbjct: 149 -----KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEI 203
Query: 639 I 639
+
Sbjct: 204 V 204
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 461 QEVEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E VA+K L+ T + FL E ++G+ H N+++L G +++ E M+NG
Sbjct: 43 KESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENG 102
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
L +FL + T + V + GIA G+ YL E +H D+ +N+
Sbjct: 103 ALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNI-------LVN 152
Query: 579 XXXXXKIADFGLAKLLKK---DQTRTSTM-IRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
K++DFGL++ L++ D T TS++ + + + APE + T+ D +S+G++
Sbjct: 153 SNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIV 212
Query: 635 LLEII 639
+ E++
Sbjct: 213 MWEVM 217
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 105 EYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 154
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 155 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VAVK L+ T K F RE +++ H+++V+ G C + + ++V+E MK+G L+ F
Sbjct: 48 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 107
Query: 525 LFRQEIPT-----------------WDKRVEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L R P + + IA IA G++YL +H D+ +N
Sbjct: 108 L-RAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRN 163
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKV 626
KI DFG+++ + D R + +M PE + T +
Sbjct: 164 C-------LVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 216
Query: 627 DVYSFGVMLLEI 638
DV+SFGV+L EI
Sbjct: 217 DVWSFGVILWEI 228
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++ E
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYA 123
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + + IH
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV +IADFGLA+ + D + +T R + +MAPE L +
Sbjct: 181 RDLAARNVLVTENNVM-------RIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD 233
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 26/187 (13%)
Query: 462 EVEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520
++ VA+K L + TG F+ E ++ H +LV+LLG C+ Q LV +LM +G
Sbjct: 44 KIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGC 102
Query: 521 LSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
L ++ Q + W + IA+G++YL E +++H D+ +NV
Sbjct: 103 LLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEER---RLVHRDLAARNV----- 148
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
KI DFGLA+LL+ D+ + + + +MA E + T + DV+S+G
Sbjct: 149 --LVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYG 206
Query: 633 VMLLEII 639
V + E++
Sbjct: 207 VTIWELM 213
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 45/288 (15%)
Query: 447 SYQELREATNVFDGQE---VEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLG 501
++ ++ EAT G+E ++VAVK L+ D +++ + E++++ H+N+V LLG
Sbjct: 50 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 109
Query: 502 FCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKR----------VEIALGIARGLLYLH 551
C L++ E G L FL R+ DK + + +A+G+ +L
Sbjct: 110 ACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL- 168
Query: 552 EECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT--- 608
IH D+ +NV KI DFGLA+ + D ++ +++G
Sbjct: 169 --ASKNCIHRDVAARNVLLTNGHVA-------KIGDFGLARDIMND---SNYIVKGNARL 216
Query: 609 -MGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLY 667
+ +MAPE + + T + DV+S+G++L EI L P G+++
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------SLGLNPYP----GILVNSKFYK 266
Query: 668 CVRTG-NLGATKF--ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712
V+ G + F + I + C +PT RP+ +Q+ L+ ++
Sbjct: 267 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 314
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 461 QEVEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
+E VA+K L+ T + FL E ++G+ H N+++L G +++ E M+NG
Sbjct: 41 KESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENG 100
Query: 520 TLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
L +FL + T + V + GIA G+ YL E +H D+ +N+
Sbjct: 101 ALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNI-------LVN 150
Query: 579 XXXXXKIADFGLAKLLKK---DQTRTSTM-IRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
K++DFGL++ L++ D T TS++ + + + APE + T+ D +S+G++
Sbjct: 151 SNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIV 210
Query: 635 LLEII 639
+ E++
Sbjct: 211 MWEVM 215
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 26/187 (13%)
Query: 462 EVEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520
++ VA+K L + TG F+ E ++ H +LV+LLG C+ Q LV +LM +G
Sbjct: 67 KIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGC 125
Query: 521 LSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
L ++ Q + W + IA+G++YL E +++H D+ +NV
Sbjct: 126 LLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEER---RLVHRDLAARNV----- 171
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
KI DFGLA+LL+ D+ + + + +MA E + T + DV+S+G
Sbjct: 172 --LVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYG 229
Query: 633 VMLLEII 639
V + E++
Sbjct: 230 VTIWELM 236
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFRQ--EIPTWDK 535
++FL E V+ + H NLVQLLG +E+ L +V E M G+L +L + + D
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 290
Query: 536 RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK 595
++ +L + + YL +H D+ +NV K++DFGL K
Sbjct: 291 LLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVA-------KVSDFGLTKEAS 340
Query: 596 KDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
Q ++ T APE LR + K DV+SFG++L EI
Sbjct: 341 STQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEI 379
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 466 AVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525
A+K ++K + S E+ V+ + H+N+V L H LV +L+ G L +
Sbjct: 38 ALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRI 97
Query: 526 FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKI 585
+ + T + + + YLHE I+H D+KP+N+ I
Sbjct: 98 LERGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIM----I 150
Query: 586 ADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
DFGL+K+ +Q + GT GY+APE L P + VD +S GV+ I+ C
Sbjct: 151 TDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITY-ILLC 202
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 45/288 (15%)
Query: 447 SYQELREATNVFDGQE---VEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLG 501
++ ++ EAT G+E ++VAVK L+ D +++ + E++++ H+N+V LLG
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 502 FCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKR----------VEIALGIARGLLYLH 551
C L++ E G L FL R+ DK + + +A+G+ +L
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL- 176
Query: 552 EECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT--- 608
IH D+ +NV KI DFGLA+ + D ++ +++G
Sbjct: 177 --ASKNCIHRDVAARNVLLTNGHVA-------KIGDFGLARDIMND---SNYIVKGNARL 224
Query: 609 -MGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLY 667
+ +MAPE + + T + DV+S+G++L EI L P G+++
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------SLGLNPYP----GILVNSKFYK 274
Query: 668 CVRTG-NLGATKF--ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712
V+ G + F + I + C +PT RP+ +Q+ L+ ++
Sbjct: 275 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 322
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 20/188 (10%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520
+ +VAVK ++ + E +FL E V+ H LV+L + + ++ E M G+
Sbjct: 211 KHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGS 268
Query: 521 LSAFL-----FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXX 575
L FL +Q +P K ++ + IA G+ ++ + IH D++ N+
Sbjct: 269 LLDFLKSDEGSKQPLP---KLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLV 322
Query: 576 XXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
KIADFGLA++++ ++ + + + APE + T K DV+SFG++L
Sbjct: 323 C-------KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 375
Query: 636 LEIIFCKR 643
+EI+ R
Sbjct: 376 MEIVTYGR 383
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 175 KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 228
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 11/177 (6%)
Query: 466 AVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
AVK + K G E S E+ V+ + H+N+V L NH LV +L+ G L
Sbjct: 51 AVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDR 110
Query: 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK 584
+ + T + + + YLH I+H D+KP+N+
Sbjct: 111 IVEKGFYTEKDASTLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIM---- 163
Query: 585 IADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
I+DFGL+K+ K ++ GT GY+APE L P + VD +S GV+ I+ C
Sbjct: 164 ISDFGLSKMEGKGDVMSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLC 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 133 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 182
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 183 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 242
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFRQ--EIPTWDK 535
++FL E V+ + H NLVQLLG +E+ L +V E M G+L +L + + D
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103
Query: 536 RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK 595
++ +L + + YL +H D+ +NV K++DFGL K
Sbjct: 104 LLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVA-------KVSDFGLTK--- 150
Query: 596 KDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ + T + + + APE LR + K DV+SFG++L EI
Sbjct: 151 -EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFRQ--EIPTWDK 535
++FL E V+ + H NLVQLLG +E+ L +V E M G+L +L + + D
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 118
Query: 536 RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK 595
++ +L + + YL +H D+ +NV K++DFGL K
Sbjct: 119 LLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVA-------KVSDFGLTK--- 165
Query: 596 KDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ + T + + + APE LR + K DV+SFG++L EI
Sbjct: 166 -EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 20/184 (10%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520
+ +VAVK ++ + E +FL E V+ H LV+L + + ++ E M G+
Sbjct: 38 KHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGS 95
Query: 521 LSAFL-----FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXX 575
L FL +Q +P K ++ + IA G+ ++ + IH D++ N+
Sbjct: 96 LLDFLKSDEGSKQPLP---KLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLV 149
Query: 576 XXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
KIADFGLA++++ ++ + + + APE + T K DV+SFG++L
Sbjct: 150 C-------KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 202
Query: 636 LEII 639
+EI+
Sbjct: 203 MEIV 206
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 109 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 158
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 159 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 107 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 156
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 157 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 216
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 18/183 (9%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+VAVK L+ V T + ++F EV V+ +T H N++ +G+ + N +V + + +L
Sbjct: 60 DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSL 118
Query: 522 SAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXX 580
L QE + ++IA A+G+ YLH + IIH D+K N+
Sbjct: 119 YKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNI-------FLHEG 168
Query: 581 XXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVMLL 636
KI DFGLA + + ++ G++ +MAPE +R N P + + DVYS+G++L
Sbjct: 169 LTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY 228
Query: 637 EII 639
E++
Sbjct: 229 ELM 231
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 105 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 154
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 155 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 228
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 151
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 152 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 151
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 152 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 106 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 155
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 156 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 122 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 173
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 227
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 101 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 150
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 151 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 108 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 157
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 158 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 228
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 228
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 122 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 173
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 227
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 228
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 228
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 100 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 149
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 150 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 209
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 228
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 169
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 170 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 228
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 43/222 (19%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 522 SAFL--------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQN 567
S +L ++ T + + + +A+G+ +L + IH D+ +N
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARN 178
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTAKV 626
+ KI DFGLA+ + KD R + +MAPE + + T +
Sbjct: 179 ILLSEKNVV-------KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 231
Query: 627 DVYSFGVMLLEII---------------FCKRHTELHRVDEP 653
DV+SFGV+L EI FC+R E R+ P
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 169
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 170 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V D E VA+K + + E+ FL E V+ + ++V+LLG + L++ EL
Sbjct: 50 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109
Query: 516 MKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
M G L ++L R + P+ K +++A IA G+ YL+ + +H D+
Sbjct: 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 166
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N KI DFG+ + + + D R + +M+PE L++ T
Sbjct: 167 RNCMVAEDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 219
Query: 625 KVDVYSFGVMLLEIIFCKRHTELHRVDEPTL---ANGMILTDWVLYCVRTGNLGATKFER 681
DV+SFGV+L EI +E L G +L + N FE
Sbjct: 220 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD-------KPDNCPDMLFEL 272
Query: 682 ITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVG 714
+ M C P +RPS +++ ++ E G
Sbjct: 273 MRM----CWQYNPKMRPSFLEIISSIKEEMEPG 301
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 228
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 228
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 228
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 47/229 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVAYA 123
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + + IH
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 181 RDLAARNVLVTENNVM-------KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD 233
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
V D E VA+K + + E+ FL E V+ + ++V+LLG + L++ EL
Sbjct: 40 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 99
Query: 516 MKNGTLSAFL--FRQEI--------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
M G L ++L R + P+ K +++A IA G+ YL+ + +H D+
Sbjct: 100 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAA 156
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N KI DFG+ + + + D R + +M+PE L++ T
Sbjct: 157 RNCMVAEDFTV-------KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTT 209
Query: 625 KVDVYSFGVMLLEIIFCKRHTELHRVDEPTL---ANGMILTDWVLYCVRTGNLGATKFER 681
DV+SFGV+L EI +E L G +L + N FE
Sbjct: 210 YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD-------KPDNCPDMLFEL 262
Query: 682 ITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVG 714
+ M C P +RPS +++ ++ E G
Sbjct: 263 MRM----CWQYNPKMRPSFLEIISSIKEEMEPG 291
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T ++ E
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH QI H D+KP+N+ KI DFGLA K D
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENI---MLLDRNVPKPRIKIIDFGLAH--KIDFGNEF 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657
I GT ++APE + P+ + D++S GV+ I+ L + TLAN
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY-ILLSGASPFLGDTKQETLAN 228
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +R + GQE + +K++ + RE ++ H N+V+L E+
Sbjct: 16 AFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE 75
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
LV++L+ G L + +E + I + + H I+H D+KP+
Sbjct: 76 GFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH---LNGIVHRDLKPE 132
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKV 626
N+ K+ADFGLA ++ DQ + GT GY++PE LR P V
Sbjct: 133 NL----LLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKDPYGKPV 187
Query: 627 DVYSFGVML 635
D+++ GV+L
Sbjct: 188 DMWACGVIL 196
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 12/176 (6%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK+++ + EV ++ HH N+V + + + +V E ++ G L+
Sbjct: 72 QVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD 131
Query: 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXX 583
+ + ++ + L + R L YLH + +IH DIK ++
Sbjct: 132 IVTHTRM-NEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRI------- 180
Query: 584 KIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
K++DFG + K+ + ++ GT +MAPE + P +VD++S G+M++E+I
Sbjct: 181 KLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI 235
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +R + G E + +K++ + RE ++ H N+V+L E+
Sbjct: 16 AFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEE 75
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
LV++L+ G L + +E + I +L+ H + ++H D+KP+
Sbjct: 76 GFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH---QMGVVHRDLKPE 132
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKV 626
N+ K+ADFGLA ++ DQ + GT GY++PE LR V
Sbjct: 133 NL----LLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKEAYGKPV 187
Query: 627 DVYSFGVML 635
D+++ GV+L
Sbjct: 188 DIWACGVIL 196
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 522 SAFL------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
S +L ++ T + + + +A+G+ +L + IH D+ +N+
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTAKVDV 628
KI DFGLA+ + KD R + +MAPE + + T + DV
Sbjct: 177 LSEKNVV-------KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 229
Query: 629 YSFGVMLLEII---------------FCKRHTELHRVDEP 653
+SFGV+L EI FC+R E R+ P
Sbjct: 230 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 269
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 32/198 (16%)
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIAL--GIARGLLYLHEECETQIIHCDIKPQNVXXX 571
E GTL ++ ++ DK + + L I +G+ Y+H + ++IH D+KP N+
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLV 170
Query: 572 XXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
KI DFGL LK D RT + +GT+ YM+PE + + +VD+Y+
Sbjct: 171 DTKQV-------KIGDFGLVTSLKNDGKRTRS--KGTLRYMSPEQISSQDYGKEVDLYAL 221
Query: 632 GVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA--TKFERITMVGLWC 689
G++L E+ LH D TD +R G + K E+ + L
Sbjct: 222 GLILAEL--------LHVCD-TAFETSKFFTD-----LRDGIISDIFDKKEKTLLQKL-- 265
Query: 690 ICPQPTLRPSMKQVLQML 707
+ +P RP+ ++L+ L
Sbjct: 266 LSKKPEDRPNTSEILRTL 283
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +R + G E + +K++ + RE ++ + H N+V+L E+
Sbjct: 18 AFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE 77
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
+ LV++L+ G L + +E + I + Y H I+H ++KP+
Sbjct: 78 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPE 134
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKV 626
N+ K+ADFGLA ++ + + GT GY++PE L+ P + V
Sbjct: 135 NLLLASKAKGAAV----KLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPV 188
Query: 627 DVYSFGVML 635
D+++ GV+L
Sbjct: 189 DIWACGVIL 197
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +R + G E + +K++ + RE ++ + H N+V+L E+
Sbjct: 18 AFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE 77
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
+ LV++L+ G L + +E + I + Y H I+H ++KP+
Sbjct: 78 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPE 134
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKV 626
N+ K+ADFGLA ++ + + GT GY++PE L+ P + V
Sbjct: 135 NLLLASKAKGAAV----KLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPV 188
Query: 627 DVYSFGVML 635
D+++ GV+L
Sbjct: 189 DIWACGVIL 197
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 463 VEVAVKQLEK--VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520
VE A+K + K V+ L EV V+ H N+++L F ++ + LV E K G
Sbjct: 63 VERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGE 122
Query: 521 L-SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L + R + D V I + G+ YLH+ I+H D+KP+N+
Sbjct: 123 LFDEIIHRMKFNEVDAAV-IIKQVLSGVTYLHKH---NIVHRDLKPENL----LLESKEK 174
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGL+ + + + + GT Y+APE LR K DV+S GV+L
Sbjct: 175 DALIKIVDFGLSAVFENQKKMKERL--GTAYYIAPEVLRK-KYDEKCDVWSIGVILF 228
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +R + GQE + +K++ + RE ++ H N+V+L E+
Sbjct: 16 AFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE 75
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
LV++L+ G L + +E + I + + H I+H D+KP+
Sbjct: 76 GFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH---LNGIVHRDLKPE 132
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKV 626
N+ K+ADFGLA ++ DQ + GT GY++PE LR P V
Sbjct: 133 NL----LLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKDPYGKPV 187
Query: 627 DVYSFGVML 635
D+++ GV+L
Sbjct: 188 DMWACGVIL 196
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +R + G E + +K++ + RE ++ + H N+V+L E+
Sbjct: 17 AFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE 76
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
+ LV++L+ G L + +E + I + Y H I+H ++KP+
Sbjct: 77 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPE 133
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKV 626
N+ K+ADFGLA ++ + + GT GY++PE L+ P + V
Sbjct: 134 NLLLASKAKGAAV----KLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPV 187
Query: 627 DVYSFGVML 635
D+++ GV+L
Sbjct: 188 DIWACGVIL 196
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 47/229 (20%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFL----REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
+ V VAVK L+ + + S L +++IG+ HKN++ LLG C + ++
Sbjct: 66 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVGYA 123
Query: 517 KNGTLSAFLFRQEIP----------------TWDKRVEIALGIARGLLYLHEECETQIIH 560
G L +L + P T+ V +ARG+ YL + + IH
Sbjct: 124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIH 180
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRN 619
D+ +NV KIADFGLA+ + D + +T R + +MAPE L +
Sbjct: 181 RDLAARNVLVTENNVM-------KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD 233
Query: 620 APVTAKVDVYSFGVMLLEII--------------FCKRHTELHRVDEPT 654
T + DV+SFGV++ EI K E HR+D+P
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 282
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 523 AFL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L E K ++ I +G+ YL + IH D+ +N+
Sbjct: 105 DYLQAHAERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 154
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 155 RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH D+ +N+
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNI-------LVENEN 151
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 152 RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 26/191 (13%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 522 SAFL------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
S +L ++ T + + + +A+G+ +L + IH D+ +N+
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTAKVDV 628
KI DFGLA+ + KD R + +MAPE + + T + DV
Sbjct: 177 LSEKNVV-------KIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 229
Query: 629 YSFGVMLLEII 639
+SFGV+L EI
Sbjct: 230 WSFGVLLWEIF 240
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 20/184 (10%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ + QL +V + + +
Sbjct: 36 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGSS 93
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA ARG+ YLH + IIH D+K N+
Sbjct: 94 LYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNI-------FLHE 143
Query: 580 XXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVML 635
KI DFGLA + + + + G++ +MAPE +R + P + + DVY+FG++L
Sbjct: 144 DNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 203
Query: 636 LEII 639
E++
Sbjct: 204 YELM 207
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 44/223 (19%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 522 SAFL---------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
S +L ++ T + + + +A+G+ +L + IH D+ +
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 177
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTAK 625
N+ KI DFGLA+ + KD R + +MAPE + + T +
Sbjct: 178 NILLSEKNVV-------KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 626 VDVYSFGVMLLEII---------------FCKRHTELHRVDEP 653
DV+SFGV+L EI FC+R E R+ P
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +R + G E + +K++ + RE ++ + H N+V+L E+
Sbjct: 41 AFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE 100
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
+ LV++L+ G L + +E + I + Y H I+H ++KP+
Sbjct: 101 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPE 157
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKV 626
N+ K+ADFGLA ++ + + GT GY++PE L+ P + V
Sbjct: 158 NLLLASKAKGAAV----KLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPV 211
Query: 627 DVYSFGVML 635
D+++ GV+L
Sbjct: 212 DIWACGVIL 220
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 459 DGQEVEVAVK--QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ-----LL 511
DG ++VAVK +L+ + + FL E + H N+++LLG CIE + Q ++
Sbjct: 59 DGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118
Query: 512 VYELMKNGTLSAFLFRQEIPTWDKRV------EIALGIARGLLYLHEECETQIIHCDIKP 565
+ MK G L +L + T K + + + IA G+ YL +H D+
Sbjct: 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAA 175
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLA-KLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA 624
+N +ADFGL+ K+ D R + + + ++A E L + T+
Sbjct: 176 RNCMLRDDMTVC-------VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTS 228
Query: 625 KVDVYSFGVMLLEI 638
K DV++FGV + EI
Sbjct: 229 KSDVWAFGVTMWEI 242
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 465 VAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K + K +G E S E+ V+ + H N+V L H L+ +L+ G L
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXX 583
+ + T + + + YLH+ I+H D+KP+N+
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIM--- 159
Query: 584 KIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
I+DFGL+K+ +D + GT GY+APE L P + VD +S GV+ I+ C
Sbjct: 160 -ISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLC 213
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 36/201 (17%)
Query: 465 VAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VAVK L++ E + L E V+ + +H ++++L G C + LL+ E K G+L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 524 FLF--RQEIPTW---------------DKR-------VEIALGIARGLLYLHEECETQII 559
FL R+ P + D+R + A I++G+ YL E +++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLV 172
Query: 560 HCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLR 618
H D+ +N+ KI+DFGL++ + ++D + R + +MA E L
Sbjct: 173 HRDLAARNILVAEGRKM-------KISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF 225
Query: 619 NAPVTAKVDVYSFGVMLLEII 639
+ T + DV+SFGV+L EI+
Sbjct: 226 DHIYTTQSDVWSFGVLLWEIV 246
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 465 VAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K + K +G E S E+ V+ + H N+V L H L+ +L+ G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXX 583
+ + T + + + YLH+ I+H D+KP+N+
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIM--- 159
Query: 584 KIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
I+DFGL+K+ +D + GT GY+APE L P + VD +S GV+ I+ C
Sbjct: 160 -ISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLC 213
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 45/224 (20%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 522 SAFL----------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
S +L ++ T + + + +A+G+ +L + IH D+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTA 624
+N+ KI DFGLA+ + KD R + +MAPE + + T
Sbjct: 177 RNILLSEKNVV-------KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 625 KVDVYSFGVMLLEII---------------FCKRHTELHRVDEP 653
+ DV+SFGV+L EI FC+R E R+ P
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520
QE + +K++ + RE ++ H N+V+L E+ LV++L+ G
Sbjct: 57 QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGE 116
Query: 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXX 580
L + +E + I + ++H+ I+H D+KP+N+
Sbjct: 117 LFEDIVAREYYSEADASHCIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAV- 172
Query: 581 XXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
K+ADFGLA ++ +Q + GT GY++PE LR P VD+++ GV+L
Sbjct: 173 ---KLADFGLAIEVQGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 465 VAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K + K +G E S E+ V+ + H N+V L H L+ +L+ G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXX 583
+ + T + + + YLH+ I+H D+KP+N+
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIM--- 159
Query: 584 KIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
I+DFGL+K+ +D + GT GY+APE L P + VD +S GV+ I+ C
Sbjct: 160 -ISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLC 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYELMKNGTLS 522
VAVK+L+ T + + F RE++++ H N+V+ G C + L+ E + G+L
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+L + +E K ++ I +G+ YL + IH ++ +N+
Sbjct: 103 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNI-------LVENEN 152
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL K+L +D+ G + + APE L + + DV+SFGV+L E+
Sbjct: 153 RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 212
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 45/224 (20%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 522 SAFL----------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
S +L ++ T + + + +A+G+ +L + IH D+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTA 624
+N+ KI DFGLA+ + KD R + +MAPE + + T
Sbjct: 168 RNILLSEKNVV-------KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 625 KVDVYSFGVMLLEII---------------FCKRHTELHRVDEP 653
+ DV+SFGV+L EI FC+R E R+ P
Sbjct: 221 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 36/201 (17%)
Query: 465 VAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VAVK L++ E + L E V+ + +H ++++L G C + LL+ E K G+L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 524 FLF--RQEIPTW---------------DKR-------VEIALGIARGLLYLHEECETQII 559
FL R+ P + D+R + A I++G+ YL E +++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLV 172
Query: 560 HCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLR 618
H D+ +N+ KI+DFGL++ + ++D + R + +MA E L
Sbjct: 173 HRDLAARNILVAEGRKM-------KISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF 225
Query: 619 NAPVTAKVDVYSFGVMLLEII 639
+ T + DV+SFGV+L EI+
Sbjct: 226 DHIYTTQSDVWSFGVLLWEIV 246
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 17/185 (9%)
Query: 464 EVAVKQLEKVTGDGEKSFLR-EVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKNGT 520
+VAVK L+ +G + L+ E++++ +H+N+V+ G C E N L+ E + +G+
Sbjct: 52 QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 111
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L +L + + ++++ A+ I +G+ YL Q +H D+ +NV
Sbjct: 112 LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNV-------LVES 161
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTM--IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
KI DFGL K ++ D+ + + + APE L + DV+SFGV L E
Sbjct: 162 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHE 221
Query: 638 II-FC 641
++ +C
Sbjct: 222 LLTYC 226
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 130/294 (44%), Gaps = 51/294 (17%)
Query: 447 SYQELREATNVFDGQE---VEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLG 501
++ ++ EAT G+E ++VAVK L+ D +++ + E++++ H+N+V LLG
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 502 FCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKR----------------VEIALGIAR 545
C L++ E G L FL R+ P + + + +A+
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQ 177
Query: 546 GLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMI 605
G+ +L IH D+ +NV KI DFGLA+ + D ++ ++
Sbjct: 178 GMAFL---ASKNCIHRDVAARNVLLTNGHVA-------KIGDFGLARDIMND---SNYIV 224
Query: 606 RGT----MGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMIL 661
+G + +MAPE + + T + DV+S+G++L EI L P G+++
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------SLGLNPYP----GILV 274
Query: 662 TDWVLYCVRTG-NLGATKF--ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712
V+ G + F + I + C +PT RP+ +Q+ L+ ++
Sbjct: 275 NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 328
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 45/224 (20%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 522 SAFL----------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
S +L ++ T + + + +A+G+ +L + IH D+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTA 624
+N+ KI DFGLA+ + KD R + +MAPE + + T
Sbjct: 168 RNILLSEKNVV-------KICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 625 KVDVYSFGVMLLEII---------------FCKRHTELHRVDEP 653
+ DV+SFGV+L EI FC+R E R+ P
Sbjct: 221 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 45/224 (20%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 522 SAFL----------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
S +L ++ T + + + +A+G+ +L + IH D+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTA 624
+N+ KI DFGLA+ + KD R + +MAPE + + T
Sbjct: 177 RNILLSEKNVV-------KICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 625 KVDVYSFGVMLLEII---------------FCKRHTELHRVDEP 653
+ DV+SFGV+L EI FC+R E R+ P
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 111/286 (38%), Gaps = 47/286 (16%)
Query: 366 RSNPSTNKMAAFIKVPKINNSQGQDNDSPSRVVLLAGFLSCSMLALLFGSIVIYYHPLTR 425
+S P I + +G D D ++V G +S + +F YY
Sbjct: 90 QSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYY----- 144
Query: 426 PYMCVQPSPKPKPPEINM-KVFSYQELRE--ATNVFDGQEVEVAVKQLEKVTGDG----- 477
P+P EI V + ++ E T F V + E+ TG+
Sbjct: 145 ----------PQPVEIKHDHVLDHYDIHEELGTGAFG-----VVHRVTERATGNNFAAKF 189
Query: 478 --------EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQE 529
+++ +E+Q + H LV L + N +++YE M G L + +
Sbjct: 190 VMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH 249
Query: 530 IP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+ D+ VE + +GL ++H E +H D+KP+N+ K+ DF
Sbjct: 250 NKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENI-----MFTTKRSNELKLIDF 301
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
GL L D ++ + GT + APE PV D++S GV+
Sbjct: 302 GLTAHL--DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 17/185 (9%)
Query: 464 EVAVKQLEKVTGDGEKSFLR-EVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKNGT 520
+VAVK L+ +G + L+ E++++ +H+N+V+ G C E N L+ E + +G+
Sbjct: 40 QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 99
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L +L + + ++++ A+ I +G+ YL Q +H D+ +NV
Sbjct: 100 LKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNV-------LVES 149
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTM--IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
KI DFGL K ++ D+ + + + APE L + DV+SFGV L E
Sbjct: 150 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHE 209
Query: 638 II-FC 641
++ +C
Sbjct: 210 LLTYC 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 465 VAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K + K +G E S E+ V+ + H N+V L H L+ +L+ G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXX 583
+ + T + + + YLH+ I+H D+KP+N+
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIM--- 159
Query: 584 KIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
I+DFGL+K+ +D + GT GY+APE L P + VD +S GV+ I+ C
Sbjct: 160 -ISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLC 213
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 36/201 (17%)
Query: 465 VAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VAVK L++ E + L E V+ + +H ++++L G C + LL+ E K G+L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 524 FLF--RQEIPTW---------------DKR-------VEIALGIARGLLYLHEECETQII 559
FL R+ P + D+R + A I++G+ YL E ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLV 172
Query: 560 HCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLR 618
H D+ +N+ KI+DFGL++ + ++D + R + +MA E L
Sbjct: 173 HRDLAARNILVAEGRKM-------KISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF 225
Query: 619 NAPVTAKVDVYSFGVMLLEII 639
+ T + DV+SFGV+L EI+
Sbjct: 226 DHIYTTQSDVWSFGVLLWEIV 246
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 45/224 (20%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 522 SAFL----------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
S +L ++ T + + + +A+G+ +L + IH D+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTA 624
+N+ KI DFGLA+ + KD R + +MAPE + + T
Sbjct: 177 RNILLSEKNVV-------KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 229
Query: 625 KVDVYSFGVMLLEII---------------FCKRHTELHRVDEP 653
+ DV+SFGV+L EI FC+R E R+ P
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 43/289 (14%)
Query: 447 SYQELREATNVFDGQE---VEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLG 501
++ ++ EAT G+E ++VAVK L+ D +++ + E++++ H+N+V LLG
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 502 FCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIA--RGLLYLHEE----- 553
C L++ E G L FL R+ + D IA A R LL+ +
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGM 177
Query: 554 ---CETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT-- 608
IH D+ +NV KI DFGLA+ + D ++ +++G
Sbjct: 178 AFLASKNCIHRDVAARNVLLTNGHVA-------KIGDFGLARDIMND---SNYIVKGNAR 227
Query: 609 --MGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVL 666
+ +MAPE + + T + DV+S+G++L EI L P G+++
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------SLGLNPYP----GILVNSKFY 277
Query: 667 YCVRTG-NLGATKF--ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712
V+ G + F + I + C +PT RP+ +Q+ L+ ++
Sbjct: 278 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 45/224 (20%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 522 SAFL----------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
S +L ++ T + + + +A+G+ +L + IH D+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTA 624
+N+ KI DFGLA+ + KD R + +MAPE + + T
Sbjct: 168 RNILLSEKNVV-------KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 625 KVDVYSFGVMLLEII---------------FCKRHTELHRVDEP 653
+ DV+SFGV+L EI FC+R E R+ P
Sbjct: 221 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 45/224 (20%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 522 SAFL----------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
S +L ++ T + + + +A+G+ +L + IH D+
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 178
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTA 624
+N+ KI DFGLA+ + KD R + +MAPE + + T
Sbjct: 179 RNILLSEKNVV-------KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 231
Query: 625 KVDVYSFGVMLLEII---------------FCKRHTELHRVDEP 653
+ DV+SFGV+L EI FC+R E R+ P
Sbjct: 232 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 275
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 45/224 (20%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 522 SAFL----------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
S +L ++ T + + + +A+G+ +L + IH D+
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 213
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTA 624
+N+ KI DFGLA+ + KD R + +MAPE + + T
Sbjct: 214 RNILLSEKNVV-------KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 266
Query: 625 KVDVYSFGVMLLEII---------------FCKRHTELHRVDEP 653
+ DV+SFGV+L EI FC+R E R+ P
Sbjct: 267 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 310
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 97/224 (43%), Gaps = 45/224 (20%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVY-ELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 522 SAFL----------------FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
S +L ++ T + + + +A+G+ +L + IH D+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM-IRGTMGYMAPEWLRNAPVTA 624
+N+ KI DFGLA+ + KD R + +MAPE + + T
Sbjct: 168 RNILLSEKNVV-------KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 220
Query: 625 KVDVYSFGVMLLEII---------------FCKRHTELHRVDEP 653
+ DV+SFGV+L EI FC+R E R+ P
Sbjct: 221 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 47/265 (17%)
Query: 387 QGQDNDSPSRVVLLAGFLSCSMLALLFGSIVIYYHPLTRPYMCVQPSPKPKPPEINM-KV 445
+G D D ++V G +S + +F YY P+P EI V
Sbjct: 5 RGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYY---------------PQPVEIKHDHV 49
Query: 446 FSYQELRE--ATNVFDGQEVEVAVKQLEKVTGDG-------------EKSFLREVQVIGR 490
+ ++ E T F V + E+ TG+ +++ +E+Q +
Sbjct: 50 LDHYDIHEELGTGAFG-----VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSV 104
Query: 491 THHKNLVQLLGFCIEQNHQLLVYELMKNGTL-SAFLFRQEIPTWDKRVEIALGIARGLLY 549
H LV L + N +++YE M G L + D+ VE + +GL +
Sbjct: 105 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 164
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
+H E +H D+KP+N+ K+ DFGL L D ++ + GT
Sbjct: 165 MH---ENNYVHLDLKPENI-----MFTTKRSNELKLIDFGLTAHL--DPKQSVKVTTGTA 214
Query: 610 GYMAPEWLRNAPVTAKVDVYSFGVM 634
+ APE PV D++S GV+
Sbjct: 215 EFAAPEVAEGKPVGYYTDMWSVGVL 239
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 38/271 (14%)
Query: 456 NVFDGQ---EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLV 512
V+ G+ EV + + +E+ D K+F REV +T H+N+V +G C+ H ++
Sbjct: 48 QVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107
Query: 513 YELMKNGTLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXX 571
L K TL + + +I +K +IA I +G+ YLH + I+H D+K +NV
Sbjct: 108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD 164
Query: 572 XXXXXXXXXXXXKIADFGL---AKLLKKDQTRTSTMIR-GTMGYMAPEWLR--------- 618
I DFGL + +L+ + I+ G + ++APE +R
Sbjct: 165 NGKVV--------ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEED 216
Query: 619 NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATK 678
P + DV++ G + ELH + P W + NL
Sbjct: 217 KLPFSKHSDVFALGTIWY---------ELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIG 267
Query: 679 F-ERITMVGLWCICPQPTLRPSMKQVLQMLE 708
+ I+ + L+C + RP+ +++ MLE
Sbjct: 268 MGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 464 EVAVKQL-EKVTGDGEKSFLREVQVIGRTHHKNLVQL------LGFCIEQNHQLLVYELM 516
+VA+KQ ++++ + + E+Q++ + +H N+V L + LL E
Sbjct: 41 QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYC 100
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIAL---GIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
+ G L +L + E K I I+ L YLHE +IIH D+KP+N+
Sbjct: 101 EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPG 157
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI D G AK L DQ T GT+ Y+APE L T VD +SFG
Sbjct: 158 PQRLIH----KIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGT 211
Query: 634 MLLEII 639
+ E I
Sbjct: 212 LAFECI 217
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ + QL +V + + +
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGSS 105
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA ARG+ YLH + IIH D+K N+
Sbjct: 106 LYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNI-------FLHE 155
Query: 580 XXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVML 635
KI DFGLA + + + G++ +MAPE +R + P + + DVY+FG++L
Sbjct: 156 DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 215
Query: 636 LEII 639
E++
Sbjct: 216 YELM 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 464 EVAVKQL-EKVTGDGEKSFLREVQVIGRTHHKNLVQL------LGFCIEQNHQLLVYELM 516
+VA+KQ ++++ + + E+Q++ + +H N+V L + LL E
Sbjct: 42 QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYC 101
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIAL---GIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
+ G L +L + E K I I+ L YLHE +IIH D+KP+N+
Sbjct: 102 EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPG 158
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI D G AK L DQ T GT+ Y+APE L T VD +SFG
Sbjct: 159 PQRLIH----KIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGT 212
Query: 634 MLLEII 639
+ E I
Sbjct: 213 LAFECI 218
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 480 SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV-E 538
L E V+ + + +V+++G C E +LV E+ + G L+ +L +Q DK + E
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 115
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
+ ++ G+ YL E + +H D+ +NV KI+DFGL+K L+ D+
Sbjct: 116 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYA-------KISDFGLSKALRADE 165
Query: 599 TRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
G + + APE + ++K DV+SFGV++ E
Sbjct: 166 NXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 464 EVAVKQLEKVTGDGE--KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
E AVK + K + + + LREV+++ + H N+++L + + +V EL G L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+ +++ + I + G+ Y+H+ I+H D+KP+N+
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENI----LLESKEKDC 161
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
KI DFGL+ +++ T+ I GT Y+APE LR K DV+S GV+L
Sbjct: 162 DIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPEVLR-GTYDEKCDVWSAGVIL 212
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 480 SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV-E 538
L E V+ + + +V+++G C E +LV E+ + G L+ +L +Q DK + E
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 131
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
+ ++ G+ YL E + +H D+ +NV KI+DFGL+K L+ D+
Sbjct: 132 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYA-------KISDFGLSKALRADE 181
Query: 599 TRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
G + + APE + ++K DV+SFGV++ E
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 480 SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV-E 538
L E V+ + + +V+++G C E +LV E+ + G L+ +L +Q DK + E
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 131
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
+ ++ G+ YL E + +H D+ +NV KI+DFGL+K L+ D+
Sbjct: 132 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYA-------KISDFGLSKALRADE 181
Query: 599 TRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
G + + APE + ++K DV+SFGV++ E
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 480 SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV-E 538
L E V+ + + +V+++G C E +LV E+ + G L+ +L +Q DK + E
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 115
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
+ ++ G+ YL E + +H D+ +NV KI+DFGL+K L+ D+
Sbjct: 116 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYA-------KISDFGLSKALRADE 165
Query: 599 TRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
G + + APE + ++K DV+SFGV++ E
Sbjct: 166 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 464 EVAVKQLEKVTGDGE--KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
E AVK + K + + + LREV+++ + H N+++L + + +V EL G L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+ +++ + I + G+ Y+H+ I+H D+KP+N+
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENI----LLESKEKDC 161
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
KI DFGL+ +++ T+ I GT Y+APE LR K DV+S GV+L
Sbjct: 162 DIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPEVLR-GTYDEKCDVWSAGVIL 212
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 480 SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV-E 538
L E V+ + + +V+++G C E +LV E+ + G L+ +L +Q DK + E
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 129
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
+ ++ G+ YL E + +H D+ +NV KI+DFGL+K L+ D+
Sbjct: 130 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYA-------KISDFGLSKALRADE 179
Query: 599 TRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
G + + APE + ++K DV+SFGV++ E
Sbjct: 180 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 28/200 (14%)
Query: 456 NVFDGQEV---EVAVKQLEKVTGDGEKSFLREVQVIGR-THHKNLVQLLGFCIEQN---- 507
V+ G+ V ++A ++ VTGD E+ +E+ ++ + +HH+N+ G I++N
Sbjct: 39 QVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 98
Query: 508 -HQL-LVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDI 563
QL LV E G+++ + + T + I I RGL +LH+ ++IH DI
Sbjct: 99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDI 155
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR----- 618
K QNV K+ DFG++ L + R +T I GT +MAPE +
Sbjct: 156 KGQNV-------LLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDENP 207
Query: 619 NAPVTAKVDVYSFGVMLLEI 638
+A K D++S G+ +E+
Sbjct: 208 DATYDFKSDLWSLGITAIEM 227
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 460 GQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKN 518
GQE V V +V +K S LREVQ++ + H N+++L F ++ + LV E+
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110
Query: 519 GTL-SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXX 577
G L + R+ D I + G+ Y+H + +I+H D+KP+N+
Sbjct: 111 GELFDEIISRKRFSEVDA-ARIIRQVLSGITYMH---KNKIVHRDLKPENL----LLESK 162
Query: 578 XXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
+I DFGL+ + + + GT Y+APE L + K DV+S GV+L
Sbjct: 163 SKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVL-HGTYDEKCDVWSTGVIL 217
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 464 EVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520
E A+K ++K T + L EV V+ + H N+++L F ++ + LV E+ + G
Sbjct: 48 ERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGE 107
Query: 521 L-SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L + RQ+ D V I + G YLH+ I+H D+KP+N+
Sbjct: 108 LFDEIILRQKFSEVDAAV-IMKQVLSGTTYLHKH---NIVHRDLKPENL----LLESKSR 159
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFGL+ + + GT Y+APE LR K DV+S GV+L I+
Sbjct: 160 DALIKIVDFGLSAHFEVGGKMKERL--GTAYYIAPEVLRK-KYDEKCDVWSCGVILY-IL 215
Query: 640 FC 641
C
Sbjct: 216 LC 217
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 460 GQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKN 518
GQE V V +V +K S LREVQ++ + H N+++L F ++ + LV E+
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 134
Query: 519 GTL-SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXX 577
G L + R+ D I + G+ Y+H + +I+H D+KP+N+
Sbjct: 135 GELFDEIISRKRFSEVDA-ARIIRQVLSGITYMH---KNKIVHRDLKPENL----LLESK 186
Query: 578 XXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
+I DFGL+ + + + GT Y+APE L + K DV+S GV+L
Sbjct: 187 SKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVL-HGTYDEKCDVWSTGVIL 241
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 460 GQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKN 518
GQE V V +V +K S LREVQ++ + H N+++L F ++ + LV E+
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 133
Query: 519 GTL-SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXX 577
G L + R+ D I + G+ Y+H + +I+H D+KP+N+
Sbjct: 134 GELFDEIISRKRFSEVDA-ARIIRQVLSGITYMH---KNKIVHRDLKPENL----LLESK 185
Query: 578 XXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
+I DFGL+ + + + GT Y+APE L + K DV+S GV+L
Sbjct: 186 SKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVL-HGTYDEKCDVWSTGVIL 240
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 480 SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV-E 538
L E V+ + + +V+++G C E +LV E+ + G L+ +L +Q DK + E
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 111
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
+ ++ G+ YL E + +H D+ +NV KI+DFGL+K L+ D+
Sbjct: 112 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYA-------KISDFGLSKALRADE 161
Query: 599 TRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
G + + APE + ++K DV+SFGV++ E
Sbjct: 162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 460 GQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKN 518
GQE V V +V +K S LREVQ++ + H N+++L F ++ + LV E+
Sbjct: 57 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 116
Query: 519 GTL-SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXX 577
G L + R+ D I + G+ Y+H + +I+H D+KP+N+
Sbjct: 117 GELFDEIISRKRFSEVDA-ARIIRQVLSGITYMH---KNKIVHRDLKPENL----LLESK 168
Query: 578 XXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
+I DFGL+ + + + GT Y+APE L + K DV+S GV+L
Sbjct: 169 SKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVL-HGTYDEKCDVWSTGVIL 223
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 464 EVAVKQLEKVTGDGE--KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
E AVK + K + + + LREV+++ + H N+++L + + +V EL G L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+ +++ + I + G+ Y+H+ I+H D+KP+N+
Sbjct: 109 FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENI----LLESKEKDC 161
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
KI DFGL+ +++ T+ I GT Y+APE LR K DV+S GV+L
Sbjct: 162 DIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPEVLR-GTYDEKCDVWSAGVIL 212
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFCIEQN---HQLLVYELMK 517
++ A+K L ++T + ++FLRE ++ +H N++ L+G + H LL Y M
Sbjct: 49 RIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY--MC 106
Query: 518 NGTLSAFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+G L F+ Q PT + L +ARG+ YL E + +H D+ +N
Sbjct: 107 HGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTV 163
Query: 577 XXXXXXXKIADFGLAK-LLKKD--QTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
K+ADFGLA+ +L ++ + R + + A E L+ T K DV+SFGV
Sbjct: 164 -------KVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGV 216
Query: 634 MLLEII 639
+L E++
Sbjct: 217 LLWELL 222
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 480 SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV-E 538
L E V+ + + +V+++G C E +LV E+ + G L+ +L +Q DK + E
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 109
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
+ ++ G+ YL E + +H D+ +NV KI+DFGL+K L+ D+
Sbjct: 110 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYA-------KISDFGLSKALRADE 159
Query: 599 TRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
G + + APE + ++K DV+SFGV++ E
Sbjct: 160 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 20/184 (10%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ QL +V + + +
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP--QLAIVTQWCEGSS 105
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA ARG+ YLH + IIH D+K N+
Sbjct: 106 LYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNI-------FLHE 155
Query: 580 XXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVML 635
KI DFGLA + + + G++ +MAPE +R + P + + DVY+FG++L
Sbjct: 156 DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVL 215
Query: 636 LEII 639
E++
Sbjct: 216 YELM 219
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 49/292 (16%)
Query: 447 SYQELREATNVFDGQE---VEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLG 501
++ ++ EAT G+E ++VAVK L+ D +++ + E++++ H+N+V LLG
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 502 FCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALG-------------IARGL 547
C L++ E G L FL R+ + D IA +A+G+
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGM 177
Query: 548 LYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRG 607
+L IH D+ +NV KI DFGLA+ + D ++ +++G
Sbjct: 178 AFL---ASKNCIHRDVAARNVLLTNGHVA-------KIGDFGLARDIMND---SNYIVKG 224
Query: 608 T----MGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTD 663
+ +MAPE + + T + DV+S+G++L EI L P G+++
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------SLGLNPYP----GILVNS 274
Query: 664 WVLYCVRTG-NLGATKF--ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712
V+ G + F + I + C +PT RP+ +Q+ L+ ++
Sbjct: 275 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 480 SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV-E 538
L E V+ + + +V+++G C E +LV E+ + G L+ +L +Q DK + E
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 121
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
+ ++ G+ YL E + +H D+ +NV KI+DFGL+K L+ D+
Sbjct: 122 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYA-------KISDFGLSKALRADE 171
Query: 599 TRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
G + + APE + ++K DV+SFGV++ E
Sbjct: 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 460 GQEVEVAVKQLEKVTGDGEKSFLR-EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKN 518
G + A+K L+K +K +R E+ V+ R H N+++L LV EL+
Sbjct: 76 GTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132
Query: 519 GTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
G L + + + + I + YLHE I+H D+KP+N+
Sbjct: 133 GELFDRIVEKGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAP 189
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KIADFGL+K+++ Q T+ GT GY APE LR +VD++S G++ I
Sbjct: 190 L----KIADFGLSKIVEH-QVLMKTVC-GTPGYCAPEILRGCAYGPEVDMWSVGIITY-I 242
Query: 639 IFC 641
+ C
Sbjct: 243 LLC 245
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 480 SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV-E 538
L E V+ + + +V+++G C E +LV E+ + G L+ +L +Q DK + E
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 473
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
+ ++ G+ YL E + +H D+ +NV KI+DFGL+K L+ D+
Sbjct: 474 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYA-------KISDFGLSKALRADE 523
Query: 599 TRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
G + + APE + ++K DV+SFGV++ E
Sbjct: 524 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 564
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 463 VEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
E A+K ++K T + L EV V+ + H N+++L F ++ + LV E+ + G
Sbjct: 30 AERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGG 89
Query: 520 TL-SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
L + RQ+ D V I + G YLH+ I+H D+KP+N+
Sbjct: 90 ELFDEIILRQKFSEVDAAV-IMKQVLSGTTYLHKH---NIVHRDLKPENL----LLESKS 141
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
KI DFGL+ + + GT Y+APE LR K DV+S GV+L I
Sbjct: 142 RDALIKIVDFGLSAHFEVGGKMKERL--GTAYYIAPEVLRK-KYDEKCDVWSCGVILY-I 197
Query: 639 IFC 641
+ C
Sbjct: 198 LLC 200
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 450 ELREATNVFDGQEVEVAVKQLEKV----TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE 505
EL + V+ Q E +V KV + + + ++ E+ ++ H N+V+LL
Sbjct: 19 ELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 506 QNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG-IARGLLYLHEECETQIIHCDIK 564
+N+ ++ E G + A + E P + ++++ L YLH+ +IIH D+K
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLK 135
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGL-AKLLKKDQTRTSTMIRGTMGYMAPEWL-----R 618
N+ K+ADFG+ AK + R + I GT +MAPE + +
Sbjct: 136 AGNILFTLDGDI-------KLADFGVSAKNTRTXIQRRDSFI-GTPYWMAPEVVMCETSK 187
Query: 619 NAPVTAKVDVYSFGVMLLEI 638
+ P K DV+S G+ L+E+
Sbjct: 188 DRPYDYKADVWSLGITLIEM 207
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 480 SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV-E 538
L E V+ + + +V+++G C E +LV E+ + G L+ +L +Q DK + E
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIE 474
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
+ ++ G+ YL E + +H D+ +NV KI+DFGL+K L+ D+
Sbjct: 475 LVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYA-------KISDFGLSKALRADE 524
Query: 599 TRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
G + + APE + ++K DV+SFGV++ E
Sbjct: 525 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 565
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VAVK E + D + FL+E +++ + H N+V+L+G C ++ +V EL++ G
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 201
Query: 524 FLFRQEIPTWDKRVEIALG-IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
FL + K + +G A G+ YL +C IH D+ +N
Sbjct: 202 FLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNC-------LVTEKNV 251
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGT-MGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
KI+DFG+++ S +R + + APE L +++ DV+SFG++L E
Sbjct: 252 LKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 19/185 (10%)
Query: 460 GQEVEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKN 518
G+++ VAVK +K T D ++ F+ E ++ H ++V+L+G IE+ ++ EL
Sbjct: 34 GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPY 92
Query: 519 GTLSAFLFRQE----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
G L +L R + + T V +L I + + YL +H DI +N+
Sbjct: 93 GELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPE 146
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
K+ DFGL++ ++ + +++ R + +M+PE + T DV+ F V
Sbjct: 147 CV-------KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVC 199
Query: 635 LLEII 639
+ EI+
Sbjct: 200 MWEIL 204
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 19/185 (10%)
Query: 460 GQEVEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKN 518
G+++ VAVK +K T D ++ F+ E ++ H ++V+L+G IE+ ++ EL
Sbjct: 50 GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPY 108
Query: 519 GTLSAFLFRQE----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
G L +L R + + T V +L I + + YL +H DI +N+
Sbjct: 109 GELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPE 162
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
K+ DFGL++ ++ + +++ R + +M+PE + T DV+ F V
Sbjct: 163 CV-------KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVC 215
Query: 635 LLEII 639
+ EI+
Sbjct: 216 MWEIL 220
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 460 GQEVEVAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKN 518
GQE V V +V +K S LREVQ++ + H N+ +L F ++ + LV E+
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG 110
Query: 519 GTL-SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXX 577
G L + R+ D I + G+ Y H + +I+H D+KP+N+
Sbjct: 111 GELFDEIISRKRFSEVDA-ARIIRQVLSGITYXH---KNKIVHRDLKPENL----LLESK 162
Query: 578 XXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
+I DFGL+ + + + GT Y+APE L + K DV+S GV+L
Sbjct: 163 SKDANIRIIDFGLSTHFEASKKXKDKI--GTAYYIAPEVL-HGTYDEKCDVWSTGVIL 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 19/185 (10%)
Query: 460 GQEVEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKN 518
G+++ VAVK +K T D ++ F+ E ++ H ++V+L+G IE+ ++ EL
Sbjct: 38 GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPY 96
Query: 519 GTLSAFLFRQE----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
G L +L R + + T V +L I + + YL +H DI +N+
Sbjct: 97 GELGHYLERNKNSLKVLT---LVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPE 150
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
K+ DFGL++ ++ + +++ R + +M+PE + T DV+ F V
Sbjct: 151 CV-------KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVC 203
Query: 635 LLEII 639
+ EI+
Sbjct: 204 MWEIL 208
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VAVK E + D + FL+E +++ + H N+V+L+G C ++ +V EL++ G
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 201
Query: 524 FLFRQEIPTWDKRVEIALG-IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
FL + K + +G A G+ YL +C IH D+ +N
Sbjct: 202 FLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNC-------LVTEKNV 251
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGT-MGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
KI+DFG+++ S +R + + APE L +++ DV+SFG++L E
Sbjct: 252 LKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 28/167 (16%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I +GL YLH E + IH DIK NV K+ADFG+A L Q + +
Sbjct: 133 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEV-------KLADFGVAGQLTDTQIKRN 182
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK-RHTELHRVDEPTLANGMIL 661
T + GT +MAPE ++ + +K D++S G+ +E+ + H+ELH +
Sbjct: 183 TFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK---------- 231
Query: 662 TDWVLYCVRTGN---LGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
VL+ + N L + + C+ +P+ RP+ K++L+
Sbjct: 232 ---VLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGR-THHKNLVQLLGFC 503
V SY E + V +E AVK ++K D + E++++ R H N++ L
Sbjct: 37 VGSYSECKRC--VHKATNMEYAVKVIDKSKRDPSE----EIEILLRYGQHPNIITLKDVY 90
Query: 504 IEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
+ H LV ELM+ G L + RQ+ + + + I + + YLH + ++H D+
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDL 147
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVT 623
KP N+ +I DFG AK L+ + T T ++APE L+
Sbjct: 148 KPSNI---LYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYD 203
Query: 624 AKVDVYSFGVMLLEII 639
D++S G++L ++
Sbjct: 204 EGCDIWSLGILLYTML 219
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 45 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 100
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 101 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 150
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 151 DFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 447 SYQELREATN-----VFDGQEVEVAVKQLEKVTGDGE-----KSFLREVQVIGRTHHKNL 496
YQ+L + V+ ++ + + L+++ D E + +RE+ ++ HH N+
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 497 VQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIAL-GIARGLLYLHEECE 555
V L+ + LV+E M+ L L + D +++I L + RG+ + H+
Sbjct: 82 VSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-- 138
Query: 556 TQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPE 615
+I+H D+KPQN+ K+ADFGLA+ R+ T T+ Y AP+
Sbjct: 139 -RILHRDLKPQNL-------LINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAPD 189
Query: 616 WLRNA-PVTAKVDVYSFGVMLLEIIFCK 642
L + + VD++S G + E+I K
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 447 SYQELREATN-----VFDGQEVEVAVKQLEKVTGDGE-----KSFLREVQVIGRTHHKNL 496
YQ+L + V+ ++ + + L+++ D E + +RE+ ++ HH N+
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 497 VQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIAL-GIARGLLYLHEECE 555
V L+ + LV+E M+ L L + D +++I L + RG+ + H+
Sbjct: 82 VSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-- 138
Query: 556 TQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPE 615
+I+H D+KPQN+ K+ADFGLA+ R+ T T+ Y AP+
Sbjct: 139 -RILHRDLKPQNL-------LINSDGALKLADFGLARAFGI-PVRSYTHEVVTLWYRAPD 189
Query: 616 WLRNA-PVTAKVDVYSFGVMLLEIIFCK 642
L + + VD++S G + E+I K
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 71 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 126
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 127 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 176
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 177 DFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 50 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 105
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 106 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 155
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 156 DFGWS--VHAPSSRRTTLC-GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T D+ +
Sbjct: 64 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ 123
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH + +I H D+KP+N+ K+ DFG+A K +
Sbjct: 124 ILDGVHYLHSK---RIAHFDLKPENI---MLLDKNVPNPRIKLIDFGIAH--KIEAGNEF 175
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
I GT ++APE + P+ + D++S GV+
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 20/198 (10%)
Query: 448 YQELREATNVFDGQEVEVAVKQLE---KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCI 504
+ E+ A + DG V VA+K+++ + ++E+ ++ + +H N+++ I
Sbjct: 45 FSEVYRAACLLDG--VPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI 102
Query: 505 EQNHQLLVYELMKNGTLSAFL--FRQEIPTWDKRV--EIALGIARGLLYLHEECETQIIH 560
E N +V EL G LS + F+++ +R + + + L ++H +++H
Sbjct: 103 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMH 159
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620
DIKP NV K+ D GL + T +++ GT YM+PE +
Sbjct: 160 RDIKPANV-------FITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHEN 211
Query: 621 PVTAKVDVYSFGVMLLEI 638
K D++S G +L E+
Sbjct: 212 GYNFKSDIWSLGCLLYEM 229
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 28/167 (16%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I +GL YLH E + IH DIK NV K+ADFG+A L Q + +
Sbjct: 113 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEV-------KLADFGVAGQLTDTQIKRN 162
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK-RHTELHRVDEPTLANGMIL 661
T + GT +MAPE ++ + +K D++S G+ +E+ + H+ELH +
Sbjct: 163 TFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK---------- 211
Query: 662 TDWVLYCVRTGN---LGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
VL+ + N L + + C+ +P+ RP+ K++L+
Sbjct: 212 ---VLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 23/194 (11%)
Query: 456 NVFDGQEVEVAVKQLEKV----TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLL 511
V+ Q E +V KV + + + ++ E+ ++ H N+V+LL +N+ +
Sbjct: 52 KVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI 111
Query: 512 VYELMKNGTLSAFLFRQEIPTWDKRVEIALG-IARGLLYLHEECETQIIHCDIKPQNVXX 570
+ E G + A + E P + ++++ L YLH+ +IIH D+K N+
Sbjct: 112 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILF 168
Query: 571 XXXXXXXXXXXXXKIADFGL-AKLLKKDQTRTSTMIRGTMGYMAPEWL-----RNAPVTA 624
K+ADFG+ AK + Q R S + GT +MAPE + ++ P
Sbjct: 169 TLDGDI-------KLADFGVSAKNTRXIQRRDSFI--GTPYWMAPEVVMCETSKDRPYDY 219
Query: 625 KVDVYSFGVMLLEI 638
K DV+S G+ L+E+
Sbjct: 220 KADVWSLGITLIEM 233
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGR-THHKNLVQLLGFC 503
V SY E + V +E AVK ++K D + E++++ R H N++ L
Sbjct: 37 VGSYSECKRC--VHKATNMEYAVKVIDKSKRDPSE----EIEILLRYGQHPNIITLKDVY 90
Query: 504 IEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
+ H LV ELM+ G L + RQ+ + + + I + + YLH + ++H D+
Sbjct: 91 DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDL 147
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVT 623
KP N+ +I DFG AK L+ + T T ++APE L+
Sbjct: 148 KPSNI---LYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYD 203
Query: 624 AKVDVYSFGVMLLEII 639
D++S G++L ++
Sbjct: 204 EGCDIWSLGILLYTML 219
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 112/279 (40%), Gaps = 54/279 (19%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VAVK L E+ + D + F RE ++ + N+V+LLG C L++E M G L+
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 524 FLFRQEIP-------------------------TWDKRVEIALGIARGLLYLHEECETQI 558
FL R P + +++ IA +A G+ YL E +
Sbjct: 140 FL-RSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF 195
Query: 559 IHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWL 617
+H D+ +N KIADFGL++ + D + + +M PE +
Sbjct: 196 VHRDLATRNC-------LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESI 248
Query: 618 RNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA- 676
T + DV+++GV+L EI E V+Y VR GN+ A
Sbjct: 249 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE-----------VIYYVRDGNILAC 297
Query: 677 ---TKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712
E ++ L C P RPS + ++L+ E
Sbjct: 298 PENCPLELYNLMRL-CWSKLPADRPSFCSIHRILQRMCE 335
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 50 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 105
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 106 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 155
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 156 DFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T D+ +
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ 137
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH + +I H D+KP+N+ K+ DFG+A K +
Sbjct: 138 ILDGVHYLHSK---RIAHFDLKPENI---MLLDKNVPNPRIKLIDFGIAH--KIEAGNEF 189
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
I GT ++APE + P+ + D++S GV+
Sbjct: 190 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 221
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 23/194 (11%)
Query: 456 NVFDGQEVEVAVKQLEKV----TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLL 511
V+ Q E +V KV + + + ++ E+ ++ H N+V+LL +N+ +
Sbjct: 52 KVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI 111
Query: 512 VYELMKNGTLSAFLFRQEIPTWDKRVEIALG-IARGLLYLHEECETQIIHCDIKPQNVXX 570
+ E G + A + E P + ++++ L YLH+ +IIH D+K N+
Sbjct: 112 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILF 168
Query: 571 XXXXXXXXXXXXXKIADFGL-AKLLKKDQTRTSTMIRGTMGYMAPEWL-----RNAPVTA 624
K+ADFG+ AK + Q R S + GT +MAPE + ++ P
Sbjct: 169 TLDGDI-------KLADFGVSAKNTRTIQRRDSFI--GTPYWMAPEVVMCETSKDRPYDY 219
Query: 625 KVDVYSFGVMLLEI 638
K DV+S G+ L+E+
Sbjct: 220 KADVWSLGITLIEM 233
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 37/207 (17%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y E++ A N + V V + +++ D ++ +E+ + +H+N+V+ G E
Sbjct: 18 AYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEIXINKMLNHENVVKFYGHRREG 76
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIAR------------GLLYLHEEC 554
N Q L E G L R+E +G+ G++YLH
Sbjct: 77 NIQYLFLEYCSGGELF------------DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 555 ETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK-KDQTRTSTMIRGTMGYMA 613
I H DIKP+N+ KI+DFGLA + + ++ R + GT+ Y+A
Sbjct: 123 -IGITHRDIKPENLLLDERDNL-------KISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 614 PEWLRNAPVTAK-VDVYSFGVMLLEII 639
PE L+ A+ VDV+S G++L ++
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 48 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 103
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 104 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 153
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 154 DFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ H N++ L + +L+ EL+ G L FL +E T D+ +
Sbjct: 57 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ 116
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH + +I H D+KP+N+ K+ DFG+A K +
Sbjct: 117 ILDGVHYLHSK---RIAHFDLKPENI---MLLDKNVPNPRIKLIDFGIAH--KIEAGNEF 168
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
I GT ++APE + P+ + D++S GV+
Sbjct: 169 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 200
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 62 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 117
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 118 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 167
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 168 DFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 44 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 99
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 100 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 149
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 150 DFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 49 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 104
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 105 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 154
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 155 DFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 50/267 (18%)
Query: 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ +VAVK + K E F +E Q + + H LV+ G C ++ +V E + NG L
Sbjct: 32 QYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCL 90
Query: 522 SAFLFRQEIPTWD--KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
+L R + + +E+ + G+ +L Q IH D+ +N
Sbjct: 91 LNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCV--- 143
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
K++DFG+ + + DQ +S + + + APE ++K DV++FG+++ E+
Sbjct: 144 ----KVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVF 199
Query: 640 FCKRH--------------TELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMV 685
+ ++ HR+ P LA+ I ++Y
Sbjct: 200 SLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQ--IMYS----------------- 240
Query: 686 GLWCICPQPTLRPSMKQVLQMLEGTSE 712
C P RP+ +Q+L +E E
Sbjct: 241 ---CWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 37/207 (17%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y E++ A N + V V + +++ D ++ +E+ + +H+N+V+ G E
Sbjct: 19 AYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEIXINKMLNHENVVKFYGHRREG 77
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIAR------------GLLYLHEEC 554
N Q L E G L R+E +G+ G++YLH
Sbjct: 78 NIQYLFLEYCSGGELF------------DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 555 ETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK-KDQTRTSTMIRGTMGYMA 613
I H DIKP+N+ KI+DFGLA + + ++ R + GT+ Y+A
Sbjct: 124 -IGITHRDIKPENLLLDERDNL-------KISDFGLATVFRYNNRERLLNKMXGTLPYVA 175
Query: 614 PEWLRNAPVTAK-VDVYSFGVMLLEII 639
PE L+ A+ VDV+S G++L ++
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAML 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 24/193 (12%)
Query: 456 NVFDGQEVE----VAVKQLEK--VTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNH 508
NV+ +E + VA+K L K + +G E RE+++ HH N+++L + ++
Sbjct: 38 NVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRR 97
Query: 509 QLLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQ 566
L+ E G L L Q+ T+D++ I +A L+Y H + ++IH DIKP+
Sbjct: 98 IYLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELADALMYCHGK---KVIHRDIKPE 152
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKV 626
N+ KIADFG + + R TM GT+ Y+ PE + KV
Sbjct: 153 NLLLGLKGEL-------KIADFGWS--VHAPSLRRKTMC-GTLDYLPPEMIEGRMHNEKV 202
Query: 627 DVYSFGVMLLEII 639
D++ GV+ E++
Sbjct: 203 DLWCIGVLCYELL 215
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E G + L Q
Sbjct: 50 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--Q 105
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 106 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 155
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 156 DFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 31/188 (16%)
Query: 470 LEKVTGDGEKSFLREVQVIGRTHHKNLVQLLG------FCIEQNHQ----------LLVY 513
+++V + EK+ REV+ + + H N+V G + E + + +
Sbjct: 41 IKRVKYNNEKA-EREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQM 99
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIAL--GIARGLLYLHEECETQIIHCDIKPQNVXXX 571
E GTL ++ ++ DK + + L I +G+ Y+H + ++I+ D+KP N+
Sbjct: 100 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156
Query: 572 XXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
KI DFGL LK D R + +GT+ YM+PE + + +VD+Y+
Sbjct: 157 DTKQV-------KIGDFGLVTSLKNDGKRXRS--KGTLRYMSPEQISSQDYGKEVDLYAL 207
Query: 632 GVMLLEII 639
G++L E++
Sbjct: 208 GLILAELL 215
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 46 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 101
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 102 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 151
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 152 DFGWS--VHAPSSRRDTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 465 VAVKQLEKVTGDGE---------KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
VA+K L + GD E + F REV ++ +H N+V+L G N +V E
Sbjct: 47 VAIKSL--ILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEF 102
Query: 516 MKNGTLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
+ G L L + P W ++ + L IA G+ Y+ + I+H D++ N+
Sbjct: 103 VPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNI--FLQS 159
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL--RNAPVTAKVDVYSFG 632
K+ADFGL+ + + + + G +MAPE + T K D YSF
Sbjct: 160 LDENAPVCAKVADFGLS----QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFA 215
Query: 633 VMLLEII 639
++L I+
Sbjct: 216 MILYTIL 222
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 42 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 97
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 98 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 147
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 148 DFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 131/301 (43%), Gaps = 58/301 (19%)
Query: 447 SYQELREATNVFDGQE---VEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLG 501
++ ++ EAT G+E ++VAVK L+ D +++ + E++++ H+N+V LLG
Sbjct: 43 AFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 102
Query: 502 FCIEQNHQLLVYELMKNGTLSAFLFR-------------QEIPTWDKR----------VE 538
C L++ E G L FL R Q+ DK +
Sbjct: 103 ACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLH 162
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
+ +A+G+ +L IH D+ +NV KI DFGLA+ + D
Sbjct: 163 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVA-------KIGDFGLARDIMND- 211
Query: 599 TRTSTMIRGT----MGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT 654
++ +++G + +MAPE + + T + DV+S+G++L EI L P
Sbjct: 212 --SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------SLGLNPYP- 262
Query: 655 LANGMILTDWVLYCVRTG-NLGATKF--ERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711
G+++ V+ G + F + I + C +PT RP+ +Q+ L+ +
Sbjct: 263 ---GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 319
Query: 712 E 712
+
Sbjct: 320 Q 320
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 48 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 103
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 104 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 153
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 154 DFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 29/174 (16%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVYELMKNGTLSAFLFRQEIPTWDKRV 537
EV + H+N++Q +G E+ L+ + G+LS FL + + +W++
Sbjct: 68 EVYSLPGMKHENILQFIG--AEKRGTSVDVDLWLITAFHEKGSLSDFL-KANVVSWNELC 124
Query: 538 EIALGIARGLLYLHEEC-------ETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGL 590
IA +ARGL YLHE+ + I H DIK +NV IADFGL
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC-------IADFGL 177
Query: 591 AKLLKKDQTRTSTMIR-GTMGYMAPEWLRNA-----PVTAKVDVYSFGVMLLEI 638
A + ++ T + GT YMAPE L A ++D+Y+ G++L E+
Sbjct: 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VAVK+++ + EV ++ H+N+V++ + + +V E ++ G L+
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK 584
+ + ++ + L + + L LH + +IH DIK ++ K
Sbjct: 239 VTHTRM-NEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV-------K 287
Query: 585 IADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
++DFG + K+ R ++ GT +MAPE + P +VD++S G+M++E++
Sbjct: 288 LSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 341
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 21/193 (10%)
Query: 456 NVFDGQEVEVAVKQLEKV----TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLL 511
V+ Q E +V KV + + + ++ E+ ++ H N+V+LL +N+ +
Sbjct: 52 KVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWI 111
Query: 512 VYELMKNGTLSAFLFRQEIPTWDKRVEIALG-IARGLLYLHEECETQIIHCDIKPQNVXX 570
+ E G + A + E P + ++++ L YLH+ +IIH D+K N+
Sbjct: 112 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILF 168
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL-----RNAPVTAK 625
K+ADFG++ + R I GT +MAPE + ++ P K
Sbjct: 169 TLDGDI-------KLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCETSKDRPYDYK 220
Query: 626 VDVYSFGVMLLEI 638
DV+S G+ L+E+
Sbjct: 221 ADVWSLGITLIEM 233
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VAVK+++ + EV ++ H+N+V++ + + +V E ++ G L+
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 118
Query: 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK 584
+ + ++ + L + + L LH + +IH DIK ++ K
Sbjct: 119 VTHTRM-NEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV-------K 167
Query: 585 IADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
++DFG + K+ R ++ GT +MAPE + P +VD++S G+M++E++
Sbjct: 168 LSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VAVK+++ + EV ++ H+N+V++ + + +V E ++ G L+
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 107
Query: 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK 584
+ + ++ + L + + L LH + +IH DIK ++ K
Sbjct: 108 VTHTRM-NEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV-------K 156
Query: 585 IADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
++DFG + K+ R ++ GT +MAPE + P +VD++S G+M++E++
Sbjct: 157 LSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VAVK+++ + EV ++ H+N+V++ + + +V E ++ G L+
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 116
Query: 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK 584
+ + ++ + L + + L LH + +IH DIK ++ K
Sbjct: 117 VTHTRM-NEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV-------K 165
Query: 585 IADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
++DFG + K+ R ++ GT +MAPE + P +VD++S G+M++E++
Sbjct: 166 LSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 219
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ + QL +V + + +
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGSS 94
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA A+G+ YLH + IIH D+K N+
Sbjct: 95 LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI-------FLHE 144
Query: 580 XXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVML 635
KI DFGLA + + + + G++ +MAPE +R P + + DVY+FG++L
Sbjct: 145 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 204
Query: 636 LEII 639
E++
Sbjct: 205 YELM 208
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VAVK+++ + EV ++ H+N+V++ + + +V E ++ G L+
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 111
Query: 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK 584
+ + ++ + L + + L LH + +IH DIK ++ K
Sbjct: 112 VTHTRM-NEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV-------K 160
Query: 585 IADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
++DFG + K+ R ++ GT +MAPE + P +VD++S G+M++E++
Sbjct: 161 LSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 214
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 37/207 (17%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y E++ A N + V V + +++ D ++ +E+ + +H+N+V+ G E
Sbjct: 18 AYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIAR------------GLLYLHEEC 554
N Q L E G L R+E +G+ G++YLH
Sbjct: 77 NIQYLFLEYCSGGELF------------DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 555 ETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK-KDQTRTSTMIRGTMGYMA 613
I H DIKP+N+ KI+DFGLA + + ++ R + GT+ Y+A
Sbjct: 123 -IGITHRDIKPENLLLDERDNL-------KISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 614 PEWLRNAPVTAK-VDVYSFGVMLLEII 639
PE L+ A+ VDV+S G++L ++
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y E++ A N + V V + +++ D ++ +E+ + +H+N+V+ G E
Sbjct: 18 AYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIAR------------GLLYLHEEC 554
N Q L E G L R+E +G+ G++YLH
Sbjct: 77 NIQYLFLEYCSGGELF------------DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 555 ETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK-KDQTRTSTMIRGTMGYMA 613
I H DIKP+N+ KI+DFGLA + + ++ R + GT+ Y+A
Sbjct: 123 -IGITHRDIKPENLLLDERDNL-------KISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 614 PEWLRNAPVTAK-VDVYSFGVML 635
PE L+ A+ VDV+S G++L
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVL 197
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 18/190 (9%)
Query: 451 LREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGR-THHKNLVQLLGFCIEQNHQ 509
+ +ATN+ E AVK ++K D + E++++ R H N++ L + +
Sbjct: 42 IHKATNM------EFAVKIIDKSKRDPTE----EIEILLRYGQHPNIITLKDVYDDGKYV 91
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVX 569
+V ELMK G L + RQ+ + + + I + + YLH + ++H D+KP N+
Sbjct: 92 YVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNI- 147
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVY 629
+I DFG AK L+ + T T ++APE L A D++
Sbjct: 148 --LYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDIW 204
Query: 630 SFGVMLLEII 639
S GV+L ++
Sbjct: 205 SLGVLLYTML 214
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524
VAVK+++ + EV ++ H+N+V++ + + +V E ++ G L+
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK 584
+ + ++ + L + + L LH + +IH DIK ++ K
Sbjct: 162 VTHTRM-NEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV-------K 210
Query: 585 IADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
++DFG + K+ R ++ GT +MAPE + P +VD++S G+M++E++
Sbjct: 211 LSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 264
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 46 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 101
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 102 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 151
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 152 DFGWS--CHAPSSRRTTL-SGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIEQ 506
Y+ L + T V+ VA+K+++ + +G S +RE+ ++ H+N+V+L +
Sbjct: 22 YKGLNKTTGVY------VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE 75
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIAL------GIARGLLYLHEECETQIIH 560
N LV+E M N L ++ + + + +E+ L + +GL + H E +I+H
Sbjct: 76 NKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILH 131
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620
D+KPQN+ K+ DFGLA+ S+ + T+ Y AP+ L +
Sbjct: 132 RDLKPQNL-------LINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGS 183
Query: 621 PV-TAKVDVYSFGVMLLEIIFCK 642
+ +D++S G +L E+I K
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGK 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ + QL +V + + +
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGSS 94
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA A+G+ YLH + IIH D+K N+
Sbjct: 95 LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI-------FLHE 144
Query: 580 XXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVML 635
KI DFGLA + + + + G++ +MAPE +R P + + DVY+FG++L
Sbjct: 145 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 204
Query: 636 LEII 639
E++
Sbjct: 205 YELM 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ + QL +V + + +
Sbjct: 34 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGSS 91
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA A+G+ YLH + IIH D+K N+
Sbjct: 92 LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI-------FLHE 141
Query: 580 XXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVML 635
KI DFGLA + + + + G++ +MAPE +R P + + DVY+FG++L
Sbjct: 142 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 201
Query: 636 LEII 639
E++
Sbjct: 202 YELM 205
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ + QL +V + + +
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGSS 89
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA A+G+ YLH + IIH D+K N+
Sbjct: 90 LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI-------FLHE 139
Query: 580 XXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVML 635
KI DFGLA + + + + G++ +MAPE +R P + + DVY+FG++L
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 636 LEII 639
E++
Sbjct: 200 YELM 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 37/207 (17%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y E++ A N + V V + +++ D ++ +E+ + +H+N+V+ G E
Sbjct: 18 AYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRREG 76
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIAR------------GLLYLHEEC 554
N Q L E G L R+E +G+ G++YLH
Sbjct: 77 NIQYLFLEYCSGGELF------------DRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 555 ETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK-KDQTRTSTMIRGTMGYMA 613
I H DIKP+N+ KI+DFGLA + + ++ R + GT+ Y+A
Sbjct: 123 -IGITHRDIKPENLLLDERDNL-------KISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 614 PEWLRNAPVTAK-VDVYSFGVMLLEII 639
PE L+ A+ VDV+S G++L ++
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAML 201
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 45 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL--Q 100
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 101 KLSKFDEQRTATYITELANALSYCHSK---KVIHRDIKPENLLLGSAGEL-------KIA 150
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 151 DFGWS--VHAPSSRRAALC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 477 GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFR--QEIPTW 533
G + + E +++ + H + +V L + E L LV +M G + ++ ++ P +
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF 286
Query: 534 DKRVEI--ALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLA 591
+ I I GL +LH+ II+ D+KP+NV +I+D GLA
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNV-------RISDLGLA 336
Query: 592 KLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
LK QT+T GT G+MAPE L VD ++ GV L E+I +
Sbjct: 337 VELKAGQTKTKGYA-GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 477 GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFR--QEIPTW 533
G + + E +++ + H + +V L + E L LV +M G + ++ ++ P +
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF 286
Query: 534 DKRVEI--ALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLA 591
+ I I GL +LH+ II+ D+KP+NV +I+D GLA
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNV-------RISDLGLA 336
Query: 592 KLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
LK QT+T GT G+MAPE L VD ++ GV L E+I +
Sbjct: 337 VELKAGQTKTKGYA-GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 28/167 (16%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I +GL YLH E + IH DIK NV K+ADFG+A L Q + +
Sbjct: 128 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEV-------KLADFGVAGQLTDTQIKRN 177
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK-RHTELHRVDEPTLANGMIL 661
+ GT +MAPE ++ + +K D++S G+ +E+ + H+ELH +
Sbjct: 178 XFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK---------- 226
Query: 662 TDWVLYCVRTGN---LGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
VL+ + N L + + C+ +P+ RP+ K++L+
Sbjct: 227 ---VLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 477 GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFR--QEIPTW 533
G + + E +++ + H + +V L + E L LV +M G + ++ ++ P +
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF 286
Query: 534 DKRVEI--ALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLA 591
+ I I GL +LH+ II+ D+KP+NV +I+D GLA
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNV-------RISDLGLA 336
Query: 592 KLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
LK QT+T GT G+MAPE L VD ++ GV L E+I +
Sbjct: 337 VELKAGQTKTKGYA-GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 30/188 (15%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520
+ +VAVK ++ + E +FL E V+ H LV+L + + ++ E M G+
Sbjct: 205 KHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGS 262
Query: 521 LSAFL-----FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXX 575
L FL +Q +P K ++ + IA G+ ++ + IH D++ N+
Sbjct: 263 LLDFLKSDEGSKQPLP---KLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLV 316
Query: 576 XXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
KIADFGLA++ K + + APE + T K DV+SFG++L
Sbjct: 317 C-------KIADFGLARVGAKFPIK----------WTAPEAINFGSFTIKSDVWSFGILL 359
Query: 636 LEIIFCKR 643
+EI+ R
Sbjct: 360 MEIVTYGR 367
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 477 GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFR--QEIPTW 533
G + + E +++ + H + +V L + E L LV +M G + ++ ++ P +
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF 286
Query: 534 DKRVEI--ALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLA 591
+ I I GL +LH+ II+ D+KP+NV +I+D GLA
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNV-------RISDLGLA 336
Query: 592 KLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
LK QT+T GT G+MAPE L VD ++ GV L E+I +
Sbjct: 337 VELKAGQTKTKGYA-GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 22/190 (11%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVY 513
A +V GQEV A++Q+ ++ + E+ V+ + N+V L + + +V
Sbjct: 39 AMDVATGQEV--AIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIAR----GLLYLHEECETQIIHCDIKPQNVX 569
E + G+L+ + T +IA + R L +LH Q+IH DIK N+
Sbjct: 97 EYLAGGSLTDVVTE----TCMDEGQIA-AVCRECLQALEFLHS---NQVIHRDIKSDNIL 148
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVY 629
K+ DFG + +Q++ STM+ GT +MAPE + KVD++
Sbjct: 149 LGMDGSV-------KLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIW 200
Query: 630 SFGVMLLEII 639
S G+M +E+I
Sbjct: 201 SLGIMAIEMI 210
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 19/173 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 49 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 104
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 105 KLSRFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGEL-------KIA 154
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
DFG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E +
Sbjct: 155 DFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ + QL +V + + +
Sbjct: 59 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGSS 116
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA A+G+ YLH + IIH D+K N+
Sbjct: 117 LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI-------FLHE 166
Query: 580 XXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVML 635
KI DFGLA + + + + G++ +MAPE +R P + + DVY+FG++L
Sbjct: 167 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 226
Query: 636 LEII 639
E++
Sbjct: 227 YELM 230
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ + QL +V + + +
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGSS 117
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA A+G+ YLH + IIH D+K N+
Sbjct: 118 LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI-------FLHE 167
Query: 580 XXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVML 635
KI DFGLA + + + + G++ +MAPE +R P + + DVY+FG++L
Sbjct: 168 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 227
Query: 636 LEII 639
E++
Sbjct: 228 YELM 231
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYEL 515
DG VAVK L++ G +S + RE++++ +H+++V+ G C +Q + LV E
Sbjct: 35 DGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 516 MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXX 575
+ G+L +L R + + + A I G+ YLH + IH + +NV
Sbjct: 95 VPLGSLRDYLPRHCV-GLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRL 150
Query: 576 XXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLAK + + G + + APE L+ DV+SFGV
Sbjct: 151 V-------KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGV 203
Query: 634 MLLEII-FCKRHTELH 648
L E++ +C + H
Sbjct: 204 TLYELLTYCDSNQSPH 219
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 48 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 103
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 104 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 153
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 154 DFGWS--VHAPSSRRAALC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYEL 515
DG VAVK L+ G +S + +E+ ++ +H+++++ G C +Q + LV E
Sbjct: 40 DGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 516 MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXX 575
+ G+L +L R I + + A I G+ YLH + IH ++ +NV
Sbjct: 100 VPLGSLRDYLPRHSI-GLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRL 155
Query: 576 XXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLAK + + G + + APE L+ DV+SFGV
Sbjct: 156 V-------KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGV 208
Query: 634 MLLEII 639
L E++
Sbjct: 209 TLYELL 214
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 28/167 (16%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I +GL YLH E + IH DIK NV K+ADFG+A L Q + +
Sbjct: 113 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEV-------KLADFGVAGQLTDTQIKRN 162
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK-RHTELHRVDEPTLANGMIL 661
+ GT +MAPE ++ + +K D++S G+ +E+ + H+ELH +
Sbjct: 163 XFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK---------- 211
Query: 662 TDWVLYCVRTGN---LGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
VL+ + N L + + C+ +P+ RP+ K++L+
Sbjct: 212 ---VLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYEL 515
DG VAVK L++ G +S + RE++++ +H+++V+ G C +Q + LV E
Sbjct: 34 DGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 516 MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXX 575
+ G+L +L R + + + A I G+ YLH + IH + +NV
Sbjct: 94 VPLGSLRDYLPRHCV-GLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRL 149
Query: 576 XXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLAK + + G + + APE L+ DV+SFGV
Sbjct: 150 V-------KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGV 202
Query: 634 MLLEII-FCKRHTELH 648
L E++ +C + H
Sbjct: 203 TLYELLTYCDSNQSPH 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYEL 515
DG VAVK L+ G +S + +E+ ++ +H+++++ G C +Q + LV E
Sbjct: 40 DGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 516 MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXX 575
+ G+L +L R I + + A I G+ YLH + IH ++ +NV
Sbjct: 100 VPLGSLRDYLPRHSI-GLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRL 155
Query: 576 XXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLAK + + G + + APE L+ DV+SFGV
Sbjct: 156 V-------KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGV 208
Query: 634 MLLEII 639
L E++
Sbjct: 209 TLYELL 214
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 45 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 100
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 101 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 150
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 151 DFGWS--VHAPSSRRTELC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540
+RE+QV+ + +V G + E M G+L L + + +++
Sbjct: 61 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVS 120
Query: 541 LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR 600
+ + RGL YL E+ QI+H D+KP N+ K+ DFG++ L
Sbjct: 121 IAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEI-------KLCDFGVSGQLIDSMAN 171
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ GT YMAPE L+ + + D++S G+ L+E+
Sbjct: 172 SFV---GTRSYMAPERLQGTHYSVQSDIWSMGLSLVEL 206
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 20/184 (10%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ QL +V + + +
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP--QLAIVTQWCEGSS 89
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA A+G+ YLH + IIH D+K N+
Sbjct: 90 LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI-------FLHE 139
Query: 580 XXXXKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVML 635
KI DFGLA + + + + G++ +MAPE +R P + + DVY+FG++L
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 636 LEII 639
E++
Sbjct: 200 YELM 203
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 47 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 102
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 103 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 152
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
+FG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 153 NFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 45 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 100
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 101 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 150
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 151 DFGWS--VHAPSSRRAALC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 44/210 (20%)
Query: 460 GQEVEVAVKQL-EKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMK 517
G ++VAVK L EK ++ + E++++ + H+N+V LLG C L++E
Sbjct: 73 GVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCC 132
Query: 518 NGTLSAFL------FRQEIPTWD--KRVE---------------IALGIARGLLYLH-EE 553
G L +L F ++ ++ KR+E A +A+G+ +L +
Sbjct: 133 YGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS 192
Query: 554 CETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT----M 609
C +H D+ +NV KI DFGLA+ + D ++ ++RG +
Sbjct: 193 C----VHRDLAARNVLVTHGKVV-------KICDFGLARDIMSD---SNYVVRGNARLPV 238
Query: 610 GYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
+MAPE L T K DV+S+G++L EI
Sbjct: 239 KWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL-SAFLFRQEIPTWDKRVEIALG 542
E+ ++ H N+++L ++ + LV E + G L + R + D I
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD-AANIMKQ 154
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH+ I+H DIKP+N+ KI DFGL+ KD
Sbjct: 155 ILSGICYLHKH---NIVHRDIKPENI----LLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC 641
+ GT Y+APE L+ K DV+S GV++ I+ C
Sbjct: 208 RL--GTAYYIAPEVLK-KKYNEKCDVWSCGVIMY-ILLC 242
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 48 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 103
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 104 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 153
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
+FG + + +R +T+ GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 154 NFGWS--VHAPSSRRTTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 49 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 104
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 105 KLSRFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGEL-------KIA 154
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
DFG + + +R T+ GT+ Y+ PE + KVD++S GV+ E +
Sbjct: 155 DFGWS--VHAPSSRRDTLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 46 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 101
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 102 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 151
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 152 DFGWS--VHAPSSRRTDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 50 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 105
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 106 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 155
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 156 DFGWS--VHAPSSRRTDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 45 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 100
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 101 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 150
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 151 DFGWS--VHAPSSRRTDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 45 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 100
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 101 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 150
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 151 DFGWS--VHAPSSRRTDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 45 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 100
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 101 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 150
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 151 DFGWS--VHAPSSRRTXLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 71 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 126
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 127 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 176
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 177 DFGWS--VHAPSSRRDDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTH-HKNLVQLLGFCIE 505
+Y +++ A ++ +G+E AVK +EK G REV+ + + +KN+++L+ F +
Sbjct: 25 AYAKVQGAVSLQNGKEY--AVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFED 82
Query: 506 QNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
LV+E ++ G++ A + +Q+ + + +A L +LH + I H D+KP
Sbjct: 83 DTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK---GIAHRDLKP 139
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS------TMIRGTMGYMAPEWLRN 619
+N+ KI DF L +K + + T T G+ YMAPE +
Sbjct: 140 ENI----LCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEV 195
Query: 620 APVTA-----KVDVYSFGVML 635
A + D++S GV+L
Sbjct: 196 FTDQATFYDKRCDLWSLGVVL 216
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 48 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 103
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 104 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 153
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 154 DFGWS--VHAPSSRRDDLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 28/188 (14%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ + QL +V + + +
Sbjct: 52 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGSS 109
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA A+G+ YLH + IIH D+K N+
Sbjct: 110 LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI-------FLHE 159
Query: 580 XXXXKIADFGLAKLLKKDQTRTS-----TMIRGTMGYMAPEWLR---NAPVTAKVDVYSF 631
KI DFGLA +++R S + G++ +MAPE +R P + + DVY+F
Sbjct: 160 DLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 215
Query: 632 GVMLLEII 639
G++L E++
Sbjct: 216 GIVLYELM 223
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 465 VAVKQLEKVTGDGE---------KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
VA+K L + GD E + F REV ++ +H N+V+L G N +V E
Sbjct: 47 VAIKSL--ILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEF 102
Query: 516 MKNGTLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
+ G L L + P W ++ + L IA G+ Y+ + I+H D++ N+
Sbjct: 103 VPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNI--FLQS 159
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL--RNAPVTAKVDVYSFG 632
K+ADFG + + + + + G +MAPE + T K D YSF
Sbjct: 160 LDENAPVCAKVADFGTS----QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFA 215
Query: 633 VMLLEII 639
++L I+
Sbjct: 216 MILYTIL 222
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 465 VAVKQLEKVTGDGE---------KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
VA+K L + GD E + F REV ++ +H N+V+L G N +V E
Sbjct: 47 VAIKSL--ILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEF 102
Query: 516 MKNGTLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
+ G L L + P W ++ + L IA G+ Y+ + I+H D++ N+
Sbjct: 103 VPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNI--FLQS 159
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL--RNAPVTAKVDVYSFG 632
K+ADF L+ + + + + G +MAPE + T K D YSF
Sbjct: 160 LDENAPVCAKVADFSLS----QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFA 215
Query: 633 VMLLEII 639
++L I+
Sbjct: 216 MILYTIL 222
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLR---EVQVIGRTHHKNLVQLLGFC 503
S+ + A ++ G +EVA+K ++K R EV++ + H ++++L +
Sbjct: 23 SFAGVYRAESIHTG--LEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF 80
Query: 504 IEQNHQLLVYELMKNGTLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCD 562
+ N+ LV E+ NG ++ +L + P + ++ I G+LYLH I+H D
Sbjct: 81 EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRD 137
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV 622
+ N+ KIADFGLA LK + T+ GT Y++PE +
Sbjct: 138 LTLSNLLLTRNMNI-------KIADFGLATQLKMPHEKHYTLC-GTPNYISPEIATRSAH 189
Query: 623 TAKVDVYSFGVMLLEIIFCK 642
+ DV+S G M ++ +
Sbjct: 190 GLESDVWSLGCMFYTLLIGR 209
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 28/188 (14%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ + QL +V + + +
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGSS 89
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA A+G+ YLH + IIH D+K N+
Sbjct: 90 LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI-------FLHE 139
Query: 580 XXXXKIADFGLAKLLKKDQTRTS-----TMIRGTMGYMAPEWLR---NAPVTAKVDVYSF 631
KI DFGLA +++R S + G++ +MAPE +R P + + DVY+F
Sbjct: 140 DLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 632 GVMLLEII 639
G++L E++
Sbjct: 196 GIVLYELM 203
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 47 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 102
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 103 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 152
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 153 DFGWS--VHAPSSRRXXLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 28/188 (14%)
Query: 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGT 520
+VAVK L T ++F EV V+ +T H N++ +G+ + QL +V + + +
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGSS 117
Query: 521 LSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L L E K ++IA A+G+ YLH + IIH D+K N+
Sbjct: 118 LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI-------FLHE 167
Query: 580 XXXXKIADFGLAKLLKKDQTRTS-----TMIRGTMGYMAPEWLR---NAPVTAKVDVYSF 631
KI DFGLA +++R S + G++ +MAPE +R P + + DVY+F
Sbjct: 168 DLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 223
Query: 632 GVMLLEII 639
G++L E++
Sbjct: 224 GIVLYELM 231
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 52 KVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 112 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDL 167
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 168 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 634 MLLEII 639
+L E++
Sbjct: 221 ILAEML 226
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 45 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 100
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 101 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 150
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 151 DFGWS--VHAPSSRRXXLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E G + L Q
Sbjct: 50 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--Q 105
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 106 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 155
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 156 DFGWS--VHAPSSRRXXLX-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 52 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 112 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDL 167
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 168 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 634 MLLEII 639
+L E++
Sbjct: 221 ILAEML 226
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 48 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 107
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 108 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDL 163
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 164 -------KIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 634 MLLEII 639
+L E++
Sbjct: 217 ILAEML 222
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 48 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 107
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 108 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDL 163
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 164 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 634 MLLEII 639
+L E++
Sbjct: 217 ILAEML 222
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 34/208 (16%)
Query: 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEK--SFLREVQVIGRTH---HKNLVQ 498
KVF ++L+ VA+K++ TG+ S +REV V+ H N+V+
Sbjct: 26 KVFKARDLKNGGRF-------VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 499 LLGFCI-----EQNHQLLVYELMKNGTLSAFLFR---QEIPTWDKRVEIALGIARGLLYL 550
L C + LV+E + + L+ +L + +PT + ++ + RGL +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-DMMFQLLRGLDFL 136
Query: 551 HEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMG 610
H +++H D+KPQN+ K+ADFGLA++ TS ++ T+
Sbjct: 137 HSH---RVVHRDLKPQNILVTSSGQI-------KLADFGLARIYSFQMALTSVVV--TLW 184
Query: 611 YMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
Y APE L + VD++S G + E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 12/173 (6%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGR-THHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
E AVK ++K D + E++++ R H N++ L + + +V EL K G L
Sbjct: 49 EFAVKIIDKSKRDPTE----EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELL 104
Query: 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
+ RQ+ + + + I + + YLH + ++H D+KP N+
Sbjct: 105 DKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNI---LYVDESGNPES 158
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
+I DFG AK L+ + T T ++APE L A D++S GV+L
Sbjct: 159 IRICDFGFAKQLRAENGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLL 210
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 46 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 105
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 106 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 161
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 162 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 214
Query: 634 MLLEII 639
+L E++
Sbjct: 215 ILAEML 220
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF----RQEIPTWDKRVEI 539
E++V+ H N++++ + ++ +V E + G L + R + + E+
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 540 ALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQT 599
+ L Y H + ++H D+KP+N+ KI DFGLA+L K D+
Sbjct: 130 MKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPI----KIIDFGLAELFKSDE- 181
Query: 600 RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
ST GT YMAPE + VT K D++S GV++
Sbjct: 182 -HSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVM 215
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 56 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 115
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 116 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 171
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 172 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 224
Query: 634 MLLEII 639
+L E++
Sbjct: 225 ILAEML 230
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 48 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 107
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 108 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 163
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 164 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 634 MLLEII 639
+L E++
Sbjct: 217 ILAEML 222
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 53 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 112
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 113 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 168
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 169 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 221
Query: 634 MLLEII 639
+L E++
Sbjct: 222 ILAEML 227
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 469 QLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ 528
QLEK E REV++ H N+++L G+ + L+ E GT+ L Q
Sbjct: 48 QLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--Q 103
Query: 529 EIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIA 586
++ +D++ +A L Y H + ++IH DIKP+N+ KIA
Sbjct: 104 KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL-------KIA 153
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
DFG + + +R + GT+ Y+ PE + KVD++S GV+ E + K
Sbjct: 154 DFGWS--VHAPSSRRXXLC-GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 54 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 113
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 114 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 169
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 170 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 222
Query: 634 MLLEII 639
+L E++
Sbjct: 223 ILAEML 228
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 45 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 104
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 105 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 160
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 161 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 213
Query: 634 MLLEII 639
+L E++
Sbjct: 214 ILAEML 219
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 52 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 112 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 167
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 168 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 634 MLLEII 639
+L E++
Sbjct: 221 ILAEML 226
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 50 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 109
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 110 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 165
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 166 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 218
Query: 634 MLLEII 639
+L E++
Sbjct: 219 ILAEML 224
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVY 513
A +V GQEV A++Q+ ++ + E+ V+ + N+V L + + +V
Sbjct: 39 AMDVATGQEV--AIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIAR----GLLYLHEECETQIIHCDIKPQNVX 569
E + G+L+ + T +IA + R L +LH Q+IH DIK N+
Sbjct: 97 EYLAGGSLTDVVTE----TCMDEGQIA-AVCRECLQALEFLHS---NQVIHRDIKSDNIL 148
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVY 629
K+ DFG + +Q++ S M+ GT +MAPE + KVD++
Sbjct: 149 LGMDGSV-------KLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKVDIW 200
Query: 630 SFGVMLLEII 639
S G+M +E+I
Sbjct: 201 SLGIMAIEMI 210
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVY 513
A +V GQEV A++Q+ ++ + E+ V+ + N+V L + + +V
Sbjct: 39 AMDVATGQEV--AIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIAR----GLLYLHEECETQIIHCDIKPQNVX 569
E + G+L+ + T +IA + R L +LH Q+IH DIK N+
Sbjct: 97 EYLAGGSLTDVVTE----TCMDEGQIA-AVCRECLQALEFLHS---NQVIHRDIKSDNIL 148
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVY 629
K+ DFG + +Q++ S M+ GT +MAPE + KVD++
Sbjct: 149 LGMDGSV-------KLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIW 200
Query: 630 SFGVMLLEII 639
S G+M +E+I
Sbjct: 201 SLGIMAIEMI 210
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 48 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 107
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 108 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 163
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 164 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 634 MLLEII 639
+L E++
Sbjct: 217 ILAEML 222
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 48 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 107
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 108 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDL 163
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 164 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 216
Query: 634 MLLEII 639
+L E++
Sbjct: 217 ILAEML 222
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 52 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 112 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 167
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 168 -------KICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 634 MLLEII 639
+L E++
Sbjct: 221 ILAEML 226
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 53 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 112
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 113 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 168
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 169 -------KICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGC 221
Query: 634 MLLEII 639
+L E++
Sbjct: 222 ILAEML 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 46 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 105
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 106 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 161
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 162 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 214
Query: 634 MLLEII 639
+L E++
Sbjct: 215 ILAEML 220
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVY 513
A +V GQEV A++Q+ ++ + E+ V+ + N+V L + + +V
Sbjct: 40 AMDVATGQEV--AIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 97
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIAR----GLLYLHEECETQIIHCDIKPQNVX 569
E + G+L+ + T +IA + R L +LH Q+IH DIK N+
Sbjct: 98 EYLAGGSLTDVVTE----TCMDEGQIA-AVCRECLQALEFLHS---NQVIHRDIKSDNIL 149
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVY 629
K+ DFG + +Q++ S M+ GT +MAPE + KVD++
Sbjct: 150 LGMDGSV-------KLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIW 201
Query: 630 SFGVMLLEII 639
S G+M +E+I
Sbjct: 202 SLGIMAIEMI 211
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 68 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 127
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 128 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 183
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 184 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 236
Query: 634 MLLEII 639
+L E++
Sbjct: 237 ILAEML 242
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 16/186 (8%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTHHKNLVQLLGFCIEQNHQ--LLVYEL 515
DG VAVK L+ G +S + +E+ ++ +H+++++ G C + LV E
Sbjct: 57 DGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116
Query: 516 MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXX 575
+ G+L +L R I + + A I G+ YLH + IH D+ +NV
Sbjct: 117 VPLGSLRDYLPRHSI-GLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRL 172
Query: 576 XXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT--MGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLAK + + G + + APE L+ DV+SFGV
Sbjct: 173 V-------KIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGV 225
Query: 634 MLLEII 639
L E++
Sbjct: 226 TLYELL 231
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 463 VEVAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ VA+K + T D + FL+E + + H ++V+L+G I +N ++ EL G L
Sbjct: 44 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGEL 102
Query: 522 SAFL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXX 580
+FL R+ + A ++ L YL + + +H DI +NV
Sbjct: 103 RSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV---- 155
Query: 581 XXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
K+ DFGL++ ++ ++ + + +MAPE + T+ DV+ FGV + EI+
Sbjct: 156 ---KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 212
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 463 VEVAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ VA+K + T D + FL+E + + H ++V+L+G I +N ++ EL G L
Sbjct: 67 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGEL 125
Query: 522 SAFL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXX 580
+FL R+ + A ++ L YL + + +H DI +NV
Sbjct: 126 RSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV---- 178
Query: 581 XXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
K+ DFGL++ ++ ++ + + +MAPE + T+ DV+ FGV + EI+
Sbjct: 179 ---KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 235
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 465 VAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K + T D + FL+E + + H ++V+L+G I +N ++ EL G L +
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRS 99
Query: 524 FL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
FL R+ + A ++ L YL + + +H DI +NV
Sbjct: 100 FLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV------ 150
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
K+ DFGL++ ++ ++ + + +MAPE + T+ DV+ FGV + EI+
Sbjct: 151 -KLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 34/208 (16%)
Query: 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEK--SFLREVQVIGRTH---HKNLVQ 498
KVF ++L+ VA+K++ TG+ S +REV V+ H N+V+
Sbjct: 26 KVFKARDLKNGGRF-------VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 499 LLGFCI-----EQNHQLLVYELMKNGTLSAFLFR---QEIPTWDKRVEIALGIARGLLYL 550
L C + LV+E + + L+ +L + +PT + ++ + RGL +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-DMMFQLLRGLDFL 136
Query: 551 HEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMG 610
H +++H D+KPQN+ K+ADFGLA++ TS ++ T+
Sbjct: 137 HSH---RVVHRDLKPQNILVTSSGQI-------KLADFGLARIYSFQMALTSVVV--TLW 184
Query: 611 YMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
Y APE L + VD++S G + E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 22/190 (11%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVY 513
A +V GQEV A++Q+ ++ + E+ V+ + N+V L + + +V
Sbjct: 40 AMDVATGQEV--AIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 97
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIAR----GLLYLHEECETQIIHCDIKPQNVX 569
E + G+L+ + T +IA + R L +LH Q+IH +IK N+
Sbjct: 98 EYLAGGSLTDVVTE----TCMDEGQIA-AVCRECLQALEFLHS---NQVIHRNIKSDNIL 149
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVY 629
K+ DFG + +Q++ STM+ GT +MAPE + KVD++
Sbjct: 150 LGMDGSV-------KLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIW 201
Query: 630 SFGVMLLEII 639
S G+M +E+I
Sbjct: 202 SLGIMAIEMI 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 465 VAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K + T D + FL+E + + H ++V+L+G I +N ++ EL G L +
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRS 99
Query: 524 FL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
FL R+ + A ++ L YL + + +H DI +NV
Sbjct: 100 FLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV------ 150
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
K+ DFGL++ ++ ++ + + +MAPE + T+ DV+ FGV + EI+
Sbjct: 151 -KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 463 VEVAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ VA+K + T D + FL+E + + H ++V+L+G I +N ++ EL G L
Sbjct: 39 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGEL 97
Query: 522 SAFL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXX 580
+FL R+ + A ++ L YL + + +H DI +NV
Sbjct: 98 RSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV---- 150
Query: 581 XXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
K+ DFGL++ ++ ++ + + +MAPE + T+ DV+ FGV + EI+
Sbjct: 151 ---KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 34/208 (16%)
Query: 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEK--SFLREVQVIGRTH---HKNLVQ 498
KVF ++L+ VA+K++ TG+ S +REV V+ H N+V+
Sbjct: 26 KVFKARDLKNGGRF-------VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 499 LLGFCI-----EQNHQLLVYELMKNGTLSAFLFR---QEIPTWDKRVEIALGIARGLLYL 550
L C + LV+E + + L+ +L + +PT + ++ + RGL +L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-DMMFQLLRGLDFL 136
Query: 551 HEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMG 610
H +++H D+KPQN+ K+ADFGLA++ TS ++ T+
Sbjct: 137 HSH---RVVHRDLKPQNILVTSSGQI-------KLADFGLARIYSFQMALTSVVV--TLW 184
Query: 611 YMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
Y APE L + VD++S G + E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + +
Sbjct: 68 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHL 127
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 128 MGADLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDL 183
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 184 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 236
Query: 634 MLLEII 639
+L E++
Sbjct: 237 ILAEML 242
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQL-EKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
DG+ V+ VA+K L E + K L E V+ + +LLG C+ QL V +L
Sbjct: 41 DGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQL 99
Query: 516 MKNGTL-------SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L L Q++ W + IA+G+ YL + +++H D+ +NV
Sbjct: 100 MPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYLED---VRLVHRDLAARNV 150
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLA+LL D+T + + + +MA E + T + D
Sbjct: 151 LVKSPNHV-------KITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSD 203
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 204 VWSYGVTVWELM 215
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 84/205 (40%), Gaps = 23/205 (11%)
Query: 452 REATNVFDGQEVEVAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL 510
RE N F + QLEK +G E RE+++ H N++++ + ++
Sbjct: 35 REKQNKFIMALKVLFKSQLEK---EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 91
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
L+ E G L L + + +A L Y HE ++IH DIKP+N+
Sbjct: 92 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLM 148
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYS 630
KIADFG + + R M GT+ Y+ PE + KVD++
Sbjct: 149 GYKGEL-------KIADFGWS--VHAPSLRRRXMC-GTLDYLPPEMIEGKTHDEKVDLWC 198
Query: 631 FGVMLLEIIF------CKRHTELHR 649
GV+ E + HTE HR
Sbjct: 199 AGVLCYEFLVGMPPFDSPSHTETHR 223
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 465 VAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K + T D + FL+E + + H ++V+L+G I +N ++ EL G L +
Sbjct: 43 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRS 101
Query: 524 FL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
FL R+ + A ++ L YL + + +H DI +NV
Sbjct: 102 FLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV------ 152
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
K+ DFGL++ ++ ++ + + +MAPE + T+ DV+ FGV + EI+
Sbjct: 153 -KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 209
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 52 KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 112 METDLYKLLKCQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 167
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 168 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 634 MLLEII 639
+L E++
Sbjct: 221 ILAEML 226
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 465 VAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K + T D + FL+E + + H ++V+L+G I +N ++ EL G L +
Sbjct: 38 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRS 96
Query: 524 FL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
FL R+ + A ++ L YL + + +H DI +NV
Sbjct: 97 FLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV------ 147
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
K+ DFGL++ ++ ++ + + +MAPE + T+ DV+ FGV + EI+
Sbjct: 148 -KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 204
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 465 VAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K + T D + FL+E + + H ++V+L+G I +N ++ EL G L +
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRS 99
Query: 524 FL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
FL R+ + A ++ L YL + + +H DI +NV
Sbjct: 100 FLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCV------ 150
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
K+ DFGL++ ++ ++ + + +MAPE + T+ DV+ FGV + EI+
Sbjct: 151 -KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 465 VAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K + T D + FL+E + + H ++V+L+G I +N ++ EL G L +
Sbjct: 44 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRS 102
Query: 524 FL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
FL R+ + A ++ L YL + + +H DI +NV
Sbjct: 103 FLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV------ 153
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
K+ DFGL++ ++ ++ + + +MAPE + T+ DV+ FGV + EI+
Sbjct: 154 -KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 210
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGI 543
E+ ++ + HH L+ L ++ +L+ E + G L + ++ + V +
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Query: 544 A-RGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
A GL ++HE I+H DIKP+N+ KI DFGLA L D+
Sbjct: 158 ACEGLKHMHEHS---IVHLDIKPENI-----MCETKKASSVKIIDFGLATKLNPDEIVKV 209
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
T T + APE + PV D+++ GV+
Sbjct: 210 TT--ATAEFAAPEIVDREPVGFYTDMWAIGVL 239
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFC-IEQNHQLLVYELMK--NGTLSAFLFRQEIPTWDKR- 536
F RE Q +H +V + E L Y +M+ +G + E P KR
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 537 VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK 596
+E+ + L + H+ IIH D+KP N+ K+ DFG+A+ +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAV-------KVMDFGIARAIAD 168
Query: 597 DQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
T+T+ +I GT Y++PE R V A+ DVYS G +L E++
Sbjct: 169 SGNSVTQTAAVI-GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 25/202 (12%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFC 503
++ +R N GQ+ V + + K T G + RE + H ++V+LL
Sbjct: 36 AFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETY 95
Query: 504 IEQNHQLLVYELMKNGTL---------SAFLFRQEIPTWDKRVEIALGIARGLLYLHEEC 554
+V+E M L + F++ + + + R I L Y H+
Sbjct: 96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALRYCHD-- 148
Query: 555 ETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAP 614
IIH D+KP+NV K+ DFG+A L + + GT +MAP
Sbjct: 149 -NNIIHRDVKPENVLLASKENSAPV----KLGDFGVAIQLGESGLVAGGRV-GTPHFMAP 202
Query: 615 EWLRNAPVTAKVDVYSFGVMLL 636
E ++ P VDV+ GV+L
Sbjct: 203 EVVKREPYGKPVDVWGCGVILF 224
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 84/205 (40%), Gaps = 23/205 (11%)
Query: 452 REATNVFDGQEVEVAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL 510
RE N F + QLEK +G E RE+++ H N++++ + ++
Sbjct: 34 REKQNKFIMALKVLFKSQLEK---EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 90
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
L+ E G L L + + +A L Y HE ++IH DIKP+N+
Sbjct: 91 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLM 147
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYS 630
KIADFG + + R M GT+ Y+ PE + KVD++
Sbjct: 148 GYKGEL-------KIADFGWS--VHAPSLRRRXMC-GTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 631 FGVMLLEIIF------CKRHTELHR 649
GV+ E + HTE HR
Sbjct: 198 AGVLCYEFLVGMPPFDSPSHTETHR 222
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 84/205 (40%), Gaps = 23/205 (11%)
Query: 452 REATNVFDGQEVEVAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL 510
RE N F + QLEK +G E RE+++ H N++++ + ++
Sbjct: 34 REKQNKFIMALKVLFKSQLEK---EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 90
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
L+ E G L L + + +A L Y HE ++IH DIKP+N+
Sbjct: 91 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLM 147
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYS 630
KIADFG + + R M GT+ Y+ PE + KVD++
Sbjct: 148 GYKGEL-------KIADFGWS--VHAPSLRRRXMC-GTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 631 FGVMLLEIIF------CKRHTELHR 649
GV+ E + HTE HR
Sbjct: 198 AGVLCYEFLVGMPPFDSPSHTETHR 222
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA++++ + LRE++++ R H+N++ + IEQ + + + +
Sbjct: 52 KVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 112 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 167
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 168 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220
Query: 634 MLLEII 639
+L E++
Sbjct: 221 ILAEML 226
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFC-IEQNHQLLVYELMK--NGTLSAFLFRQEIPTWDKR- 536
F RE Q +H +V + E L Y +M+ +G + E P KR
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 537 VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK 596
+E+ + L + H+ IIH D+KP N+ K+ DFG+A+ +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAV-------KVMDFGIARAIAD 168
Query: 597 DQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
T+T+ +I GT Y++PE R V A+ DVYS G +L E++
Sbjct: 169 SGNSVTQTAAVI-GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFC-IEQNHQLLVYELMK--NGTLSAFLFRQEIPTWDKR- 536
F RE Q +H +V + E L Y +M+ +G + E P KR
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 537 VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK 596
+E+ + L + H+ IIH D+KP N+ K+ DFG+A+ +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAV-------KVMDFGIARAIAD 168
Query: 597 DQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
T+T+ +I GT Y++PE R V A+ DVYS G +L E++
Sbjct: 169 SGNSVTQTAAVI-GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 476 DGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLL--VYELMKNGTLSAFLFR--QEI 530
+ EK L EV ++ H N+V+ I++ + L V E + G L++ + + +E
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 531 PTWDKRVEIALGIARGLLYLHEECETQ------IIHCDIKPQNVXXXXXXXXXXXXXXXK 584
D+ E L + L +EC + ++H D+KP NV K
Sbjct: 106 QYLDE--EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNV-------K 156
Query: 585 IADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ DFGLA++L D + T + GT YM+PE + K D++S G +L E+
Sbjct: 157 LGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 27/168 (16%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQN--HQLLVYELMKNGTLSAFLFRQEIPTW-----DK 535
+E+ ++ + H N+V+L+ + N H +V+EL+ G + E+PT D+
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV------MEVPTLKPLSEDQ 138
Query: 536 RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK 595
+ +G+ YLH + +IIH DIKP N+ KIADFG++ K
Sbjct: 139 ARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL-------LVGEDGHIKIADFGVSNEFK 188
Query: 596 KDQTRTSTMIRGTMGYMAPEWL---RNAPVTAKVDVYSFGVMLLEIIF 640
S + GT +MAPE L R +DV++ GV L +F
Sbjct: 189 GSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVF 235
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 19/182 (10%)
Query: 477 GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR--QEIPTWD 534
GE L E Q++ + + + +V L ++ LV LM G L ++ Q
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA 286
Query: 535 KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLL 594
+ V A I GL LH E +I++ D+KP+N+ +I+D GLA +
Sbjct: 287 RAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHI-------RISDLGLAVHV 336
Query: 595 KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII-----FCKRHTELHR 649
+ QT + GT+GYMAPE ++N T D ++ G +L E+I F +R ++ R
Sbjct: 337 PEGQTIKGRV--GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394
Query: 650 VD 651
+
Sbjct: 395 EE 396
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFC-IEQNHQLLVYELMK--NGTLSAFLFRQEIPTWDKR- 536
F RE Q +H +V + E L Y +M+ +G + E P KR
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 537 VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK 596
+E+ + L + H+ IIH D+KP N+ K+ DFG+A+ +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAV-------KVMDFGIARAIAD 168
Query: 597 DQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
T+T+ +I GT Y++PE R V A+ DVYS G +L E++
Sbjct: 169 SGNSVTQTAAVI-GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 19/182 (10%)
Query: 477 GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWD-- 534
GE L E Q++ + + + +V L ++ LV LM G L ++ +
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA 286
Query: 535 KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLL 594
+ V A I GL LH E +I++ D+KP+N+ +I+D GLA +
Sbjct: 287 RAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHI-------RISDLGLAVHV 336
Query: 595 KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII-----FCKRHTELHR 649
+ QT + GT+GYMAPE ++N T D ++ G +L E+I F +R ++ R
Sbjct: 337 PEGQTIKGRV--GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394
Query: 650 VD 651
+
Sbjct: 395 EE 396
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L FC + + +L KNG
Sbjct: 64 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNG 122
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 123 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 169
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 170 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 228
Query: 635 LLEII 639
+ +++
Sbjct: 229 IYQLV 233
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 28/177 (15%)
Query: 480 SFLREVQVIGRTH---HKNLVQLLGFCI-----EQNHQLLVYELMKNGTLSAFLFRQEIP 531
S +REV ++ R H N+V+L+ C + LV+E + + L +L + P
Sbjct: 57 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPP 115
Query: 532 TWDKRV--EIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFG 589
++ RGL +LH C I+H D+KP+N+ K+ADFG
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTV-------KLADFG 165
Query: 590 LAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI-----IFC 641
LA++ T ++ T+ Y APE L + VD++S G + E+ +FC
Sbjct: 166 LARIYSYQMALTPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 220
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 22 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 81
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 82 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 135
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 136 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 187
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 188 YSTAVDIWSLGCIFAEMV 205
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 24/184 (13%)
Query: 465 VAVKQLEKVTGDGE--KSFLREVQVIGRTHH-KNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+AVKQ+ + +G+ E K L ++ V+ ++H +VQ G I + ELM GT
Sbjct: 53 IAVKQMRR-SGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTC 109
Query: 522 SAFLFRQEIPTWDKRV--EIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
+ L ++ +R+ ++ + I + L YL E+ +IH D+KP N+
Sbjct: 110 AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNI-------LLDE 160
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA-----KVDVYSFGVM 634
K+ DFG++ L D+ + + G YMAPE + T + DV+S G+
Sbjct: 161 RGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS 218
Query: 635 LLEI 638
L+E+
Sbjct: 219 LVEL 222
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ + H N++ L + +L+ EL+ G L FL ++E + ++
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH + +I H D+KP+N+ K+ DFGLA ++ +
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENI---MLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
I GT ++APE + P+ + D++S GV+
Sbjct: 178 --IFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 475 GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWD 534
G + REV ++ + H N++ L + +L+ EL+ G L FL ++E + +
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE 115
Query: 535 KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLL 594
+ I G+ YLH + +I H D+KP+N+ K+ DFGLA +
Sbjct: 116 EATSFIKQILDGVNYLHTK---KIAHFDLKPENI---MLLDKNIPIPHIKLIDFGLAHEI 169
Query: 595 KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+D + GT ++APE + P+ + D++S GV+
Sbjct: 170 -EDGVEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 16 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 75
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 76 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 129
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 130 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 181
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 182 YSTAVDIWSLGCIFAEMV 199
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 22 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 81
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 82 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 135
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 136 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGXKY 187
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 188 YSTAVDIWSLGCIFAEMV 205
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 475 GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWD 534
G + REV ++ + H N++ L + +L+ EL+ G L FL ++E + +
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE 115
Query: 535 KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLL 594
+ I G+ YLH + +I H D+KP+N+ K+ DFGLA +
Sbjct: 116 EATSFIKQILDGVNYLHTK---KIAHFDLKPENI---MLLDKNIPIPHIKLIDFGLAHEI 169
Query: 595 KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+D + GT ++APE + P+ + D++S GV+
Sbjct: 170 -EDGVEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 15 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 75 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 128
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 129 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 181 YSTAVDIWSLGCIFAEMV 198
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
+V E + TL + + T + +E+ + L + H+ IIH D+KP N+
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 166
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQ---TRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
K+ DFG+A+ + T+T+ +I GT Y++PE R V A+ D
Sbjct: 167 SATNAV-------KVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDSVDARSD 218
Query: 628 VYSFGVMLLEII 639
VYS G +L E++
Sbjct: 219 VYSLGCVLYEVL 230
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 15 TYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 75 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 128
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 129 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 181 YSTAVDIWSLGCIFAEMV 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 15 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 75 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 128
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 129 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 181 YSTAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 14 TYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 74 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 127
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 128 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 180 YSTAVDIWSLGCIFAEMV 197
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 475 GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWD 534
G + REV ++ + H N++ L + +L+ EL+ G L FL ++E + +
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE 115
Query: 535 KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLL 594
+ I G+ YLH + +I H D+KP+N+ K+ DFGLA +
Sbjct: 116 EATSFIKQILDGVNYLHTK---KIAHFDLKPENI---MLLDKNIPIPHIKLIDFGLAHEI 169
Query: 595 KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+D + GT ++APE + P+ + D++S GV+
Sbjct: 170 -EDGVEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 14 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 74 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 127
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 128 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 180 YSTAVDIWSLGCIFAEMV 197
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 23/195 (11%)
Query: 459 DGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKN 518
DG++ + + +++ + REV V+ H N+VQ E +V + +
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107
Query: 519 GTL-------SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXX 571
G L LF QE D V+I L L ++H+ +I+H DIK QN+
Sbjct: 108 GDLFKRINAQKGVLF-QEDQILDWFVQICLA----LKHVHDR---KILHRDIKSQNIFLT 159
Query: 572 XXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
++ DFG+A++L I GT Y++PE N P K D+++
Sbjct: 160 KDGTV-------QLGDFGIARVLNSTVELARACI-GTPYYLSPEICENKPYNNKSDIWAL 211
Query: 632 GVMLLEIIFCKRHTE 646
G +L E+ K E
Sbjct: 212 GCVLYELCTLKHAFE 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ H+N++ + IEQ + + + +
Sbjct: 50 KVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDL 109
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 110 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDL 165
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 166 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 218
Query: 634 MLLEII 639
+L E++
Sbjct: 219 ILAEML 224
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ + H N++ L + +L+ EL+ G L FL ++E + ++
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH + +I H D+KP+N+ K+ DFGLA + +D
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENI---MLLDKNIPIPHIKLIDFGLAHEI-EDGVEFK 176
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+ GT ++APE + P+ + D++S GV+
Sbjct: 177 NIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 14 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 74 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 127
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 128 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 180 YSTAVDIWSLGCIFAEMV 197
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL++ +L
Sbjct: 40 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QL 98
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 99 MPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 149
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 150 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 202
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 203 VWSYGVTVWELM 214
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 466 AVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525
A K +E + + + ++ E++++ H +V+LLG ++ E G + A +
Sbjct: 40 AAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM 99
Query: 526 FRQEIPTWDKRVEIAL-GIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK 584
+ + ++++ + L +LH + +IIH D+K NV +
Sbjct: 100 LELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDI-------R 149
Query: 585 IADFGL-AKLLKKDQTRTSTMIRGTMGYMAPE-----WLRNAPVTAKVDVYSFGVMLLEI 638
+ADFG+ AK LK Q R S + GT +MAPE +++ P K D++S G+ L+E+
Sbjct: 150 LADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 15 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 75 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 128
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 129 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGXKY 180
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 181 YSTAVDIWSLGCIFAEMV 198
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 466 AVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525
A K +E + + + ++ E++++ H +V+LLG ++ E G + A +
Sbjct: 48 AAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM 107
Query: 526 FRQEIPTWDKRVEIA-LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK 584
+ + ++++ + L +LH + +IIH D+K NV +
Sbjct: 108 LELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDI-------R 157
Query: 585 IADFGL-AKLLKKDQTRTSTMIRGTMGYMAPE-----WLRNAPVTAKVDVYSFGVMLLEI 638
+ADFG+ AK LK Q R S + GT +MAPE +++ P K D++S G+ L+E+
Sbjct: 158 LADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 25/196 (12%)
Query: 459 DGQEVEVAVKQLEK--VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------L 510
DG V+VAVK L+ + + FLRE + H ++ +L+G + + +
Sbjct: 48 DGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107
Query: 511 LVYELMKNGTLSAFLFRQEIPT------WDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++ MK+G L AFL I V + IA G+ YL IH D+
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLA 164
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLA-KLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVT 623
+N +ADFGL+ K+ D R + + ++A E L + T
Sbjct: 165 ARNCMLAEDMTVC-------VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYT 217
Query: 624 AKVDVYSFGVMLLEII 639
DV++FGV + EI+
Sbjct: 218 VHSDVWAFGVTMWEIM 233
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL++ +L
Sbjct: 43 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QL 101
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 102 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 152
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 153 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 205
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 206 VWSYGVTVWELM 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL++ +L
Sbjct: 40 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QL 98
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 99 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 149
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 150 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 202
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 203 VWSYGVTVWELM 214
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 19 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 78
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 79 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 132
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 133 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 184
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 185 YSTAVDIWSLGCIFAEMV 202
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL++ +L
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QL 99
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 100 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 150
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 151 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 203
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 204 VWSYGVTVWELM 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL++ +L
Sbjct: 42 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QL 100
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 101 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 151
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 152 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 204
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 205 VWSYGVTVWELM 216
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 465 VAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K + T D + FL+E + + H ++V+L+G I +N ++ EL G L +
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 479
Query: 524 FL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
FL R+ + A ++ L YL + + +H DI +NV
Sbjct: 480 FLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCV------ 530
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
K+ DFGL++ ++ ++ + + +MAPE + T+ DV+ FGV + EI+
Sbjct: 531 -KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL++ +L
Sbjct: 46 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QL 104
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 105 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 155
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 156 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 208
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 209 VWSYGVTVWELM 220
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
REV ++ + H N++ L + +L+ EL+ G L FL ++E + ++
Sbjct: 64 REVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I G+ YLH + +I H D+KP+N+ K+ DFGLA + +D
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENI---MLLDKNIPIPHIKLIDFGLAHEI-EDGVEFK 176
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+ GT ++APE + P+ + D++S GV+
Sbjct: 177 NIF-GTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL++ +L
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QL 97
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 98 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 148
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 149 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 201
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 202 VWSYGVTVWELM 213
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFC-IEQNHQLLVYELMK--NGTLSAFLFRQEIPTWDKR- 536
F RE Q +H +V + E L Y +M+ +G + E P KR
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 537 VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK 596
+E+ + L + H+ IIH D+KP N+ K+ DFG+A+ +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANILISATNAV-------KVVDFGIARAIAD 168
Query: 597 --DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
+ + + GT Y++PE R V A+ DVYS G +L E++
Sbjct: 169 SGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 33 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 91
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 92 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 142
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLL-KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL +++ + + + +MA E + + T + D
Sbjct: 143 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 195
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 196 VWSYGVTVWELM 207
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 64 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 122
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 123 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 173
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 174 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 226
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 227 VWSYGVTVWELM 238
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 15 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 75 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLSFCHSH---RVLHRD 128
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 129 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 181 YSTAVDIWSLGCIFAEMV 198
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 97
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 98 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 148
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 149 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 201
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 202 VWSYGVTVWELM 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 97
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 98 MPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 148
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 149 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 201
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 202 VWSYGVTVWELM 213
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 465 VAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K + T D + FL+E + + H ++V+L+G I +N ++ EL G L +
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRS 479
Query: 524 FL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
FL R+ + A ++ L YL + + +H DI +NV
Sbjct: 480 FLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV------ 530
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
K+ DFGL++ ++ ++ + + +MAPE + T+ DV+ FGV + EI+
Sbjct: 531 -KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 19/186 (10%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFC----IEQNHQLLVYELM 516
+V VA+K++ + LRE++++ H+N++ + IEQ + + + +
Sbjct: 50 KVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDL 109
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L L Q + D I RGL Y+H ++H D+KP N+
Sbjct: 110 METDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 165
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIR--GTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
KI DFGLA++ D T + T Y APE + N+ T +D++S G
Sbjct: 166 -------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 218
Query: 634 MLLEII 639
+L E++
Sbjct: 219 ILAEML 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 99
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 100 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 150
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 151 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 203
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 204 VWSYGVTVWELM 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 42 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 100
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 101 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 151
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 152 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 204
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 205 VWSYGVTVWELM 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 97
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 98 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 148
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 149 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 201
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 202 VWSYGVTVWELM 213
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 482 LREVQVIGRTHHKNLVQ----LLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV 537
LRE+Q++ R H+N++ L +E + + + + L L Q++ D
Sbjct: 89 LREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN-DHIC 147
Query: 538 EIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLL--K 595
I RGL Y+H ++H D+KP N+ KI DFGLA++ +
Sbjct: 148 YFLYQILRGLKYIH---SANVLHRDLKPSNL-------LINTTCDLKICDFGLARIADPE 197
Query: 596 KDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEII 639
D T T T Y APE + N+ T +D++S G +L E++
Sbjct: 198 HDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 46 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 104
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 105 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 155
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 156 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 208
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 209 VWSYGVTVWELM 220
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 42 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 100
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 101 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 151
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 152 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 204
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 205 VWSYGVTVWELM 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 45 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 103
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 104 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 154
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 155 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 207
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 208 VWSYGVTVWELM 219
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
+VAVK ++ + EV ++ H N+V++ + ++ E ++ G L+
Sbjct: 72 QVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTD 131
Query: 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXX 583
+ + + ++ + + + L YLH + +IH DIK ++
Sbjct: 132 IVSQVRL-NEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRV------- 180
Query: 584 KIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
K++DFG + KD + ++ GT +MAPE + + +VD++S G+M++E++
Sbjct: 181 KLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV 235
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 42 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 100
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 101 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 151
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 152 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 204
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 205 VWSYGVTVWELM 216
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 115/271 (42%), Gaps = 50/271 (18%)
Query: 465 VAVKQLEKVTGDGEK-SFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
VAVK L+ E+ + + E++V+ +H N+V LLG C L++ E G L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 523 AFLFRQEIPTWDKRVEIAL------------------GIARGLLYLHEECETQIIHCDIK 564
FL R+ + A+ +A+G+ +L + IH D+
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT----MGYMAPEWLRNA 620
+N+ KI DFGLA+ +K D ++ +++G + +MAPE + N
Sbjct: 173 ARNILLTHGRIT-------KICDFGLARDIKND---SNYVVKGNARLPVKWMAPESIFNC 222
Query: 621 PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG-NLGATKF 679
T + DV+S+G+ L E+ L P GM + ++ G + + +
Sbjct: 223 VYTFESDVWSYGIFLWELF------SLGSSPYP----GMPVDSKFYKMIKEGFRMLSPEH 272
Query: 680 ERITMVGLWCIC--PQPTLRPSMKQVLQMLE 708
M + C P RP+ KQ++Q++E
Sbjct: 273 APAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 46 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 104
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 105 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 155
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 156 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 208
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 209 VWSYGVTVWELM 220
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 17 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 76
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K+ ++ L +P + + +GL + H +++H D
Sbjct: 77 NKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 130
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 131 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 183 YSTAVDIWSLGCIFAEMV 200
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 476 DGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLL--VYELMKNGTLSAFLFR--QEI 530
+ EK L EV ++ H N+V+ I++ + L V E + G L++ + + +E
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 531 PTWDKRVEIALGIARGLLYLHEECETQ------IIHCDIKPQNVXXXXXXXXXXXXXXXK 584
D+ E L + L +EC + ++H D+KP NV K
Sbjct: 106 QYLDE--EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNV-------K 156
Query: 585 IADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ DFGLA++L D+ + GT YM+PE + K D++S G +L E+
Sbjct: 157 LGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 476 DGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLL--VYELMKNGTLSAFLFR--QEI 530
+ EK L EV ++ H N+V+ I++ + L V E + G L++ + + +E
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 105
Query: 531 PTWDKRVEIALGIARGLLYLHEECETQ------IIHCDIKPQNVXXXXXXXXXXXXXXXK 584
D+ E L + L +EC + ++H D+KP NV K
Sbjct: 106 QYLDE--EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNV-------K 156
Query: 585 IADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ DFGLA++L D + + GT YM+PE + K D++S G +L E+
Sbjct: 157 LGDFGLARILNHDTSFAKAFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 49 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 107
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 108 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 158
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 159 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 211
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 212 VWSYGVTVWELM 223
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 18 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 77
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K+ ++ L +P + + +GL + H +++H D
Sbjct: 78 NKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 131
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 132 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 184 YSTAVDIWSLGCIFAEMV 201
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 97
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 98 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 148
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 149 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 201
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 202 VWSYGVTVWELM 213
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 537 VEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK 596
+ I + IA + +LH + ++H D+KP N+ K+ DFGL + +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVV-------KVGDFGLVTAMDQ 216
Query: 597 DQTRTSTMIR-----------GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHT 645
D+ + + GT YM+PE + + KVD++S G++L E+++ T
Sbjct: 217 DEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS-FST 275
Query: 646 ELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
++ RV I+TD + ++ L K+ + M+ + P PT RP +++
Sbjct: 276 QMERV--------RIITD--VRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540
+RE+QV+ + +V G + E M G+L L + +++
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 541 LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR 600
+ + +GL YL E+ +I+H D+KP N+ K+ DFG++ L
Sbjct: 111 IAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI-------KLCDFGVSGQLIDSMAN 161
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ GT YM+PE L+ + + D++S G+ L+E+
Sbjct: 162 SFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540
+RE+QV+ + +V G + E M G+L L + +++
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 541 LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR 600
+ + +GL YL E+ +I+H D+KP N+ K+ DFG++ L
Sbjct: 111 IAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI-------KLCDFGVSGQLIDSMAN 161
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ GT YM+PE L+ + + D++S G+ L+E+
Sbjct: 162 SFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I +GL YLH E + IH DIK NV K+ADFG+A L Q + +
Sbjct: 129 ILKGLDYLHSEKK---IHRDIKAANVLLSEQGDV-------KLADFGVAGQLTDTQIKRN 178
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
T + GT +MAPE ++ + +K D++S G+ +E+
Sbjct: 179 TFV-GTPFWMAPEVIQQSAYDSKADIWSLGITAIEL 213
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 14 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 74 NKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 127
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T T+ Y APE L
Sbjct: 128 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 180 YSTAVDIWSLGCIFAEMV 197
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 50/271 (18%)
Query: 465 VAVKQLEKVTGDGEK-SFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
VAVK L+ E+ + + E++V+ +H N+V LLG C L++ E G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 523 AFLFRQEIPTWDKRVEIAL------------------GIARGLLYLHEECETQIIHCDIK 564
FL R+ + A+ +A+G+ +L IH D+
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLA 195
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT----MGYMAPEWLRNA 620
+N+ KI DFGLA+ +K D ++ +++G + +MAPE + N
Sbjct: 196 ARNILLTHGRIT-------KICDFGLARHIKND---SNYVVKGNARLPVKWMAPESIFNC 245
Query: 621 PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG-NLGATKF 679
T + DV+S+G+ L E+ L P GM + ++ G + + +
Sbjct: 246 VYTFESDVWSYGIFLWELF------SLGSSPYP----GMPVDSKFYKMIKEGFRMLSPEH 295
Query: 680 ERITMVGLWCIC--PQPTLRPSMKQVLQMLE 708
M + C P RP+ KQ++Q++E
Sbjct: 296 APAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 30/177 (16%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL------MKNGTLSAFLFRQEIPTWDKR 536
RE+ H+NL+Q + E+ L EL G+L+ +L + I TW++
Sbjct: 58 REIFSTPGMKHENLLQFIA--AEKRGSNLEVELWLITAFHDKGSLTDYL-KGNIITWNEL 114
Query: 537 VEIALGIARGLLYLHEE---CETQ-----IIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+A ++RGL YLHE+ C + I H D K +NV +ADF
Sbjct: 115 CHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAV-------LADF 167
Query: 589 GLAKLLKKDQTRTSTMIR-GTMGYMAPEWLRNA-----PVTAKVDVYSFGVMLLEII 639
GLA + + T + GT YMAPE L A ++D+Y+ G++L E++
Sbjct: 168 GLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 95/219 (43%), Gaps = 47/219 (21%)
Query: 453 EATNVFDGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLL 511
EA N D + A+K++ + + +REV+ + + H +V+ +E+N
Sbjct: 23 EAKNKVD--DCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKN---- 76
Query: 512 VYELMKNGTLSAFLF-------RQEIPTW-------DKR-----VEIALGIARGLLYLHE 552
E ++ + +L+ ++ + W ++R + I L IA + +LH
Sbjct: 77 TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS 136
Query: 553 ECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIR------ 606
+ ++H D+KP N+ K+ DFGL + +D+ + +
Sbjct: 137 KG---LMHRDLKPSNIFFTMDDVV-------KVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 607 -----GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF 640
GT YM+PE + + KVD++S G++L E+++
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540
+RE+QV+ + +V G + E M G+L L + +++
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 541 LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR 600
+ + +GL YL E+ +I+H D+KP N+ K+ DFG++ L
Sbjct: 111 IAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI-------KLCDFGVSGQLIDSMAN 161
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ GT YM+PE L+ + + D++S G+ L+E+
Sbjct: 162 SFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540
+RE+QV+ + +V G + E M G+L L + +++
Sbjct: 113 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 172
Query: 541 LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR 600
+ + +GL YL E+ +I+H D+KP N+ K+ DFG++ L
Sbjct: 173 IAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI-------KLCDFGVSGQLIDSMAN 223
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ GT YM+PE L+ + + D++S G+ L+E+
Sbjct: 224 SFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 258
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540
+RE+QV+ + +V G + E M G+L L + +++
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 541 LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR 600
+ + +GL YL E+ +I+H D+KP N+ K+ DFG++ L
Sbjct: 111 IAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI-------KLCDFGVSGQLIDSMAN 161
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ GT YM+PE L+ + + D++S G+ L+E+
Sbjct: 162 SFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540
+RE+QV+ + +V G + E M G+L L + +++
Sbjct: 51 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110
Query: 541 LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR 600
+ + +GL YL E+ +I+H D+KP N+ K+ DFG++ L
Sbjct: 111 IAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI-------KLCDFGVSGQLIDSMAN 161
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ GT YM+PE L+ + + D++S G+ L+E+
Sbjct: 162 SFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 32/220 (14%)
Query: 439 PEINMKVFSYQELREATNVFDGQEVEVAVKQLEKVTGDG--EKSFLREVQVIGRTH---H 493
P + V +Y + +A + G V A+K + G+ S +REV ++ R H
Sbjct: 8 PVAEIGVGAYGTVYKARDPHSGHFV--ALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 494 KNLVQLLGFCI-----EQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV--EIALGIARG 546
N+V+L+ C + LV+E + + L +L + P ++ RG
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 547 LLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIR 606
L +LH C I+H D+KP+N+ K+ADFGLA++ ++
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTV-------KLADFGLARIYSYQMALAPVVV- 173
Query: 607 GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI-----IFC 641
T+ Y APE L + VD++S G + E+ +FC
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 212
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 115/271 (42%), Gaps = 50/271 (18%)
Query: 465 VAVKQLEKVTGDGEK-SFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
VAVK L+ E+ + + E++V+ +H N+V LLG C L++ E G L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 523 AFLFRQEIPTWDKRVEIAL------------------GIARGLLYLHEECETQIIHCDIK 564
FL R+ + A+ +A+G+ +L + IH D+
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 190
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT----MGYMAPEWLRNA 620
+N+ KI DFGLA+ +K D ++ +++G + +MAPE + N
Sbjct: 191 ARNILLTHGRIT-------KICDFGLARDIKND---SNYVVKGNARLPVKWMAPESIFNC 240
Query: 621 PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG-NLGATKF 679
T + DV+S+G+ L E+ L P GM + ++ G + + +
Sbjct: 241 VYTFESDVWSYGIFLWELF------SLGSSPYP----GMPVDSKFYKMIKEGFRMLSPEH 290
Query: 680 ERITMVGLWCIC--PQPTLRPSMKQVLQMLE 708
M + C P RP+ KQ++Q++E
Sbjct: 291 APAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 115/271 (42%), Gaps = 50/271 (18%)
Query: 465 VAVKQLEKVTGDGEK-SFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
VAVK L+ E+ + + E++V+ +H N+V LLG C L++ E G L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 523 AFLFRQEIPTWDKRVEIAL------------------GIARGLLYLHEECETQIIHCDIK 564
FL R+ + A+ +A+G+ +L + IH D+
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 195
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT----MGYMAPEWLRNA 620
+N+ KI DFGLA+ +K D ++ +++G + +MAPE + N
Sbjct: 196 ARNILLTHGRIT-------KICDFGLARDIKND---SNYVVKGNARLPVKWMAPESIFNC 245
Query: 621 PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG-NLGATKF 679
T + DV+S+G+ L E+ L P GM + ++ G + + +
Sbjct: 246 VYTFESDVWSYGIFLWELF------SLGSSPYP----GMPVDSKFYKMIKEGFRMLSPEH 295
Query: 680 ERITMVGLWCIC--PQPTLRPSMKQVLQMLE 708
M + C P RP+ KQ++Q++E
Sbjct: 296 APAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 117
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 118 CLLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 164
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R ++ + GT Y++PE L + D+++ G +
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSASKSSDLWALGCI 223
Query: 635 LLEII 639
+ +++
Sbjct: 224 IYQLV 228
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 18 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 77
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 78 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 131
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 132 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 184 YSTAVDIWSLGCIFAEMV 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 18 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 77
Query: 507 NHQLLVYELMKNGTLSAFLFRQE---IPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
N LV+E + L F+ IP + + + +GL + H +++H D+
Sbjct: 78 NKLYLVFEFLHQD-LKTFMDASALTGIPLPLIKSYL-FQLLQGLAFCHSH---RVLHRDL 132
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-V 622
KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 133 KPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 623 TAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 185 STAVDIWSLGCIFAEMV 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 17 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 76
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 77 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 130
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 131 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 183 YSTAVDIWSLGCIFAEMV 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 19 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 78
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 79 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 132
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 133 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 184
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 185 YSTAVDIWSLGCIFAEMV 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 18 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 77
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 78 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 131
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 132 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 184 YSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 17 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 76
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 77 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 130
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 131 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 183 YSTAVDIWSLGCIFAEMV 200
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 36 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 94
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA G+ YL + +++H D+ +NV
Sbjct: 95 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYLEDR---RLVHRDLAARNV 145
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 146 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 198
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 199 VWSYGVTVWELM 210
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540
+RE+QV+ + +V G + E M G+L L + +++
Sbjct: 54 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 113
Query: 541 LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR 600
+ + +GL YL E+ +I+H D+KP N+ K+ DFG++ L +
Sbjct: 114 IAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI-------KLCDFGVSGQLIDEMAN 164
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
GT YM+PE L+ + + D++S G+ L+E+
Sbjct: 165 EFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 15 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 75 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 128
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 129 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 181 YSTAVDIWSLGCIFAEMV 198
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 115/271 (42%), Gaps = 50/271 (18%)
Query: 465 VAVKQLEKVTGDGEK-SFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
VAVK L+ E+ + + E++V+ +H N+V LLG C L++ E G L
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 523 AFLFRQEIPTWDKRVEIAL------------------GIARGLLYLHEECETQIIHCDIK 564
FL R+ + A+ +A+G+ +L + IH D+
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 188
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGT----MGYMAPEWLRNA 620
+N+ KI DFGLA+ +K D ++ +++G + +MAPE + N
Sbjct: 189 ARNILLTHGRIT-------KICDFGLARDIKND---SNYVVKGNARLPVKWMAPESIFNC 238
Query: 621 PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG-NLGATKF 679
T + DV+S+G+ L E+ L P GM + ++ G + + +
Sbjct: 239 VYTFESDVWSYGIFLWELF------SLGSSPYP----GMPVDSKFYKMIKEGFRMLSPEH 288
Query: 680 ERITMVGLWCIC--PQPTLRPSMKQVLQMLE 708
M + C P RP+ KQ++Q++E
Sbjct: 289 APAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 15 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 75 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 128
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 129 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 181 YSTAVDIWSLGCIFAEMV 198
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 28/177 (15%)
Query: 480 SFLREVQVIGRTH---HKNLVQLLGFCI-----EQNHQLLVYELMKNGTLSAFLFRQEIP 531
S +REV ++ R H N+V+L+ C + LV+E + + L +L + P
Sbjct: 49 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPP 107
Query: 532 TWDKRV--EIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFG 589
++ RGL +LH C I+H D+KP+N+ K+ADFG
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTV-------KLADFG 157
Query: 590 LAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI-----IFC 641
LA++ ++ T+ Y APE L + VD++S G + E+ +FC
Sbjct: 158 LARIYSYQMALDPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 212
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 15 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 75 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 128
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 129 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 181 YSTAVDIWSLGCIFAEMV 198
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 14 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 74 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 127
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 128 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 180 YSTAVDIWSLGCIFAEMV 197
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGI 543
E+ + H+++V GF + + +V EL + +L R++ T + I
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 130
Query: 544 ARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTST 603
G YLH ++IH D+K N+ KI DFGLA ++ D R T
Sbjct: 131 VLGCQYLHR---NRVIHRDLKLGNLFLNEDLEV-------KIGDFGLATKVEYDGERKKT 180
Query: 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
+ GT Y+APE L + +VDV+S G ++ ++ K
Sbjct: 181 LC-GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 16 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 75
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 76 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 129
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 130 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 182 YSTAVDIWSLGCIFAEMV 199
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 16 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 75
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 76 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 129
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 130 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 182 YSTAVDIWSLGCIFAEMV 199
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGI 543
E+ + H+++V GF + + +V EL + +L R++ T + I
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 544 ARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTST 603
G YLH ++IH D+K N+ KI DFGLA ++ D R T
Sbjct: 127 VLGCQYLHR---NRVIHRDLKLGNLFLNEDLEV-------KIGDFGLATKVEYDGERKKT 176
Query: 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
+ GT Y+APE L + +VDV+S G ++ ++ K
Sbjct: 177 LC-GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGI 543
E+ + H+++V GF + + +V EL + +L R++ T + I
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 544 ARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTST 603
G YLH ++IH D+K N+ KI DFGLA ++ D R T
Sbjct: 127 VLGCQYLHR---NRVIHRDLKLGNLFLNEDLEV-------KIGDFGLATKVEYDGERKKT 176
Query: 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
+ GT Y+APE L + +VDV+S G ++ ++ K
Sbjct: 177 LC-GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 14 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 73
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 74 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 127
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 128 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 180 YSTAVDIWSLGCIFAEMV 197
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 15 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 75 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 128
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 129 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 181 YSTAVDIWSLGCIFAEMV 198
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540
+RE+QV+ + +V G + E M G+L L + +++
Sbjct: 78 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 137
Query: 541 LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR 600
+ + +GL YL E+ +I+H D+KP N+ K+ DFG++ L
Sbjct: 138 IAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI-------KLCDFGVSGQLIDSMAN 188
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ GT YM+PE L+ + + D++S G+ L+E+
Sbjct: 189 SFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540
+RE+QV+ + +V G + E M G+L L + +++
Sbjct: 70 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 129
Query: 541 LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR 600
+ + +GL YL E+ +I+H D+KP N+ K+ DFG++ L
Sbjct: 130 IAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEI-------KLCDFGVSGQLIDSMAN 180
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ GT YM+PE L+ + + D++S G+ L+E+
Sbjct: 181 SFV---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 215
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 28/177 (15%)
Query: 480 SFLREVQVIGRTH---HKNLVQLLGFCI-----EQNHQLLVYELMKNGTLSAFLFRQEIP 531
S +REV ++ R H N+V+L+ C + LV+E + + L +L + P
Sbjct: 49 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPP 107
Query: 532 TWDKRV--EIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFG 589
++ RGL +LH C I+H D+KP+N+ K+ADFG
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTV-------KLADFG 157
Query: 590 LAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI-----IFC 641
LA++ ++ T+ Y APE L + VD++S G + E+ +FC
Sbjct: 158 LARIYSYQMALFPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 212
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL++ +L
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QL 99
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 100 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 150
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFG AKLL ++ + + + +MA E + + T + D
Sbjct: 151 -------LVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 203
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 204 VWSYGVTVWELM 215
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 118
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 119 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 165
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R ++ + GT Y++PE L D+++ G +
Sbjct: 166 LNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSACKSSDLWALGCI 224
Query: 635 LLEII 639
+ +++
Sbjct: 225 IYQLV 229
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 17/193 (8%)
Query: 452 REATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLL 511
RE + E EV +K L+K + +SF ++ + HK+LV G C+ + +L
Sbjct: 30 REVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENIL 89
Query: 512 VYELMKNGTLSAFLFRQEIPT---WDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
V E +K G+L +L + + W ++E+A +A + +L E +IH ++ +N+
Sbjct: 90 VQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLE---ENTLIHGNVCAKNI 144
Query: 569 XXXXXXXXXXXX-XXXKIADFGLA-KLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAK 625
K++D G++ +L KD +++ + ++ PE + N +
Sbjct: 145 LLIREEDRKTGNPPFIKLSDPGISITVLPKD------ILQERIPWVPPECIENPKNLNLA 198
Query: 626 VDVYSFGVMLLEI 638
D +SFG L EI
Sbjct: 199 TDKWSFGTTLWEI 211
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 15 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K+ ++ L +P + + +GL + H +++H D
Sbjct: 75 NKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 128
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KP+N+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 129 LKPENL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 181 YSTAVDIWSLGCIFAEMV 198
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL++ +L
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QL 99
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 100 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 150
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFG AKLL ++ + + + +MA E + + T + D
Sbjct: 151 -------LVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 203
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 204 VWSYGVTVWELM 215
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL++ +L
Sbjct: 43 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QL 101
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 102 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 152
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFG AKLL ++ + + + +MA E + + T + D
Sbjct: 153 -------LVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 205
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 206 VWSYGVTVWELM 217
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 114
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 115 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 161
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R ++ + GT Y++PE L D+++ G +
Sbjct: 162 LNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSACKSSDLWALGCI 220
Query: 635 LLEII 639
+ +++
Sbjct: 221 IYQLV 225
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 18 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 77
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 78 NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 131
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KP+N+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 132 LKPENL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 184 YSTAVDIWSLGCIFAEMV 201
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 97
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 98 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 148
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFG AKLL ++ + + + +MA E + + T + D
Sbjct: 149 -------LVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 201
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 202 VWSYGVTVWELM 213
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 16 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 75
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 76 NKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 129
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KP+N+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 130 LKPENL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 182 YSTAVDIWSLGCIFAEMV 199
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 115
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 116 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 162
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANAFV-GTAQYVSPELLTEKSACKSSDLWALGCI 221
Query: 635 LLEII 639
+ +++
Sbjct: 222 IYQLV 226
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 117
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 118 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 164
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSAXKSSDLWALGCI 223
Query: 635 LLEII 639
+ +++
Sbjct: 224 IYQLV 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 99
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 100 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 150
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFG AKLL ++ + + + +MA E + + T + D
Sbjct: 151 -------LVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 203
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 204 VWSYGVTVWELM 215
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 18 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 77
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 78 NKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 131
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KPQN+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 132 LKPQNL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 184 YSTAVDIWSLGCIFAEMV 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 17 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 76
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 77 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 130
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KP+N+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 131 LKPENL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 183 YSTAVDIWSLGCIFAEMV 200
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 62 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 120
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 121 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 167
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 168 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 226
Query: 635 LLEII 639
+ +++
Sbjct: 227 IYQLV 231
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+K+L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 46 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 104
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 105 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 155
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFG AKLL ++ + + + +MA E + + T + D
Sbjct: 156 -------LVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 208
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 209 VWSYGVTVWELM 220
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 115
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 116 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 162
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 221
Query: 635 LLEII 639
+ +++
Sbjct: 222 IYQLV 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 37 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 95
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 96 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 142
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 143 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 201
Query: 635 LLEII 639
+ +++
Sbjct: 202 IYQLV 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 19/198 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N G+ V + +L+ T + +RE+ ++ +H N+V+LL +
Sbjct: 16 TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE 75
Query: 507 NHQLLVYEL----MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
N LV+E +K ++ L +P + + +GL + H +++H D
Sbjct: 76 NKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL---FQLLQGLAFCHSH---RVLHRD 129
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP- 621
+KP+N+ K+ADFGLA+ RT T+ Y APE L
Sbjct: 130 LKPENL-------LINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 622 VTAKVDVYSFGVMLLEII 639
+ VD++S G + E++
Sbjct: 182 YSTAVDIWSLGCIFAEMV 199
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 34 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 92
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 93 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 139
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 140 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 198
Query: 635 LLEII 639
+ +++
Sbjct: 199 IYQLV 203
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 115
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 116 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 162
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 221
Query: 635 LLEII 639
+ +++
Sbjct: 222 IYQLV 226
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 117
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 118 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 164
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 223
Query: 635 LLEII 639
+ +++
Sbjct: 224 IYQLV 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 115
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 116 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 162
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 221
Query: 635 LLEII 639
+ +++
Sbjct: 222 IYQLV 226
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 117
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 118 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 164
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 223
Query: 635 LLEII 639
+ +++
Sbjct: 224 IYQLV 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 36 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 94
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 95 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 141
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 142 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 200
Query: 635 LLEII 639
+ +++
Sbjct: 201 IYQLV 205
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 35 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 93
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 94 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 140
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 141 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 199
Query: 635 LLEII 639
+ +++
Sbjct: 200 IYQLV 204
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 118
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 119 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 165
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 166 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 224
Query: 635 LLEII 639
+ +++
Sbjct: 225 IYQLV 229
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 117
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 118 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 164
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 223
Query: 635 LLEII 639
+ +++
Sbjct: 224 IYQLV 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 117
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 118 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 164
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 223
Query: 635 LLEII 639
+ +++
Sbjct: 224 IYQLV 228
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 14/177 (7%)
Query: 465 VAVKQLEKVTGDG--EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
VA+K+ + D +K +RE++++ + H+NLV LL C ++ LV+E + + L
Sbjct: 53 VAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILD 112
Query: 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
+ + I G+ + H IIH DIKP+N+
Sbjct: 113 DLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENI-------LVSQSGV 162
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAK-VDVYSFGVMLLEI 638
K+ DFG A+ L + T Y APE L K VDV++ G ++ E+
Sbjct: 163 VKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 28/192 (14%)
Query: 459 DGQEVE--VAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515
+G++V+ VA+ +L + T K L E V+ + ++ +LLG C+ QL+ +L
Sbjct: 73 EGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 131
Query: 516 MKNGTLSAFLFR-------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
M G L ++ Q + W + IA+G+ YL + +++H D+ +NV
Sbjct: 132 MPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNV 182
Query: 569 XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVD 627
KI DFGLAKLL ++ + + + +MA E + + T + D
Sbjct: 183 -------LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 235
Query: 628 VYSFGVMLLEII 639
V+S+GV + E++
Sbjct: 236 VWSYGVTVWELM 247
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 41 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 99
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 100 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 146
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 147 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 205
Query: 635 LLEII 639
+ +++
Sbjct: 206 IYQLV 210
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 464 EVAVKQLEK--VTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNG 519
E A+K LEK + + + ++ RE V+ R H V+L F + + +L KNG
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNG 114
Query: 520 TLSAFLFRQEIPTWDK---RVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
L ++ ++I ++D+ R A I L YLH + IIH D+KP+N+
Sbjct: 115 ELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENI-------L 161
Query: 577 XXXXXXXKIADFGLAKLL--KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
+I DFG AK+L + Q R + + GT Y++PE L D+++ G +
Sbjct: 162 LNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSACKSSDLWALGCI 220
Query: 635 LLEII 639
+ +++
Sbjct: 221 IYQLV 225
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGI 543
E+ + H+++V GF + + +V EL + +L R++ T + I
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 544 ARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTST 603
G YLH ++IH D+K N+ KI DFGLA ++ D R
Sbjct: 151 VLGCQYLHR---NRVIHRDLKLGNLFLNEDLEV-------KIGDFGLATKVEYDGERKKV 200
Query: 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
+ GT Y+APE L + +VDV+S G ++ ++ K
Sbjct: 201 LC-GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGI 543
E+ + H+++V GF + + +V EL + +L R++ T + I
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 544 ARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTST 603
G YLH ++IH D+K N+ KI DFGLA ++ D R
Sbjct: 149 VLGCQYLHR---NRVIHRDLKLGNLFLNEDLEV-------KIGDFGLATKVEYDGERKKV 198
Query: 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
+ GT Y+APE L + +VDV+S G ++ ++ K
Sbjct: 199 LC-GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 28/197 (14%)
Query: 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFC 503
K+F+ + L++A V + ++ E++ L EV+ H +V L+ +
Sbjct: 46 KIFAMKVLKKAMIVRNAKDT---------AHTKAERNILEEVK------HPFIVDLI-YA 89
Query: 504 IEQNHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
+ +L L+ E + G L L R+ I D I+ L +LH++ II+ D
Sbjct: 90 FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRD 146
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV 622
+KP+N+ K+ DFGL K D T T T GT+ YMAPE L +
Sbjct: 147 LKPENIMLNHQGHV-------KLTDFGLCKESIHDGTVTHTFC-GTIEYMAPEILMRSGH 198
Query: 623 TAKVDVYSFGVMLLEII 639
VD +S G ++ +++
Sbjct: 199 NRAVDWWSLGALMYDML 215
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 17/193 (8%)
Query: 452 REATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLL 511
RE + E EV +K L+K + +SF ++ + HK+LV G C + +L
Sbjct: 30 REVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENIL 89
Query: 512 VYELMKNGTLSAFLFRQEIPT---WDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNV 568
V E +K G+L +L + + W ++E+A +A + +L E +IH ++ +N+
Sbjct: 90 VQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLE---ENTLIHGNVCAKNI 144
Query: 569 XXXXXXXXXXXX-XXXKIADFGLA-KLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAK 625
K++D G++ +L KD +++ + ++ PE + N +
Sbjct: 145 LLIREEDRKTGNPPFIKLSDPGISITVLPKD------ILQERIPWVPPECIENPKNLNLA 198
Query: 626 VDVYSFGVMLLEI 638
D +SFG L EI
Sbjct: 199 TDKWSFGTTLWEI 211
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGI 543
E+ + H+++V GF + + +V EL + +L R++ T + I
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 544 ARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTST 603
G YLH ++IH D+K N+ KI DFGLA ++ D R
Sbjct: 125 VLGCQYLHR---NRVIHRDLKLGNLFLNEDLEV-------KIGDFGLATKVEYDGERKKV 174
Query: 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
+ GT Y+APE L + +VDV+S G ++ ++ K
Sbjct: 175 LC-GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 461 QEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520
+E+ V +KQ+E T D E ++ H ++++ G + ++ + ++ G
Sbjct: 41 KEIVVRLKQVEH-TND-------ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGE 92
Query: 521 LSAFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
L + L + Q P + A + L YLH + II+ D+KP+N+
Sbjct: 93 LFSLLRKSQRFPNPVAKF-YAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHI--- 145
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
KI DFG AK + + + GT Y+APE + P +D +SFG+++ E++
Sbjct: 146 ----KITDFGFAKYVPD----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 197
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I +GL YLH E + IH DIK NV K+ADFG+A L Q + +
Sbjct: 125 ILKGLDYLHSERK---IHRDIKAANVLLSEQGDV-------KLADFGVAGQLTDTQIKRN 174
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
+ GT +MAPE ++ + K D++S G+ +E+
Sbjct: 175 XFV-GTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 209
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 465 VAVKQLE---KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
VA+K++ K + + + ++EV+ + + H N +Q G + ++ LV E G+
Sbjct: 82 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSA 140
Query: 522 SAFLFRQEIPTWDKRVEIAL---GIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
S L + P + VEIA G +GL YLH +IH D+K N+
Sbjct: 141 SDLLEVHKKPL--QEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNI-------LLS 188
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPE---WLRNAPVTAKVDVYSFGVML 635
K+ DFG A ++ + GT +MAPE + KVDV+S G+
Sbjct: 189 EPGLVKLGDFGSASIMA-----PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 243
Query: 636 LEI 638
+E+
Sbjct: 244 IEL 246
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 510 LLVYELMKNGTLSAFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQN 567
+L+ E G + + + E+ + + + + I G+ YLH+ I+H D+KPQN
Sbjct: 105 ILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQN 161
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ KI DFG+++ K I GT Y+APE L P+T D
Sbjct: 162 ILLSSIYPLGDI----KIVDFGMSR--KIGHACELREIMGTPEYLAPEILNYDPITTATD 215
Query: 628 VYSFGVM 634
+++ G++
Sbjct: 216 MWNIGII 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 493 HKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHE 552
H N+V+L +Q H LV EL+ G L + +++ + + I + + ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMH- 123
Query: 553 ECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYM 612
+ ++H D+KP+N+ KI DFG A+L D T T+ Y
Sbjct: 124 --DVGVVHRDLKPENL----LFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYA 176
Query: 613 APEWLRNAPVTAKVDVYSFGVMLLEII 639
APE L D++S GV+L ++
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTML 203
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 465 VAVKQLE---KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
VA+K++ K + + + ++EV+ + + H N +Q G + ++ LV E G+
Sbjct: 43 VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSA 101
Query: 522 SAFLFRQEIPTWDKRVEIAL---GIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
S L + P + VEIA G +GL YLH +IH D+K N+
Sbjct: 102 SDLLEVHKKPL--QEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNI-------LLS 149
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPE---WLRNAPVTAKVDVYSFGVML 635
K+ DFG A ++ + GT +MAPE + KVDV+S G+
Sbjct: 150 EPGLVKLGDFGSASIMA-----PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 204
Query: 636 LEI 638
+E+
Sbjct: 205 IEL 207
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 19/184 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
E AVK +EK G REV+++ + H+N+++L+ F E++ LV+E M+ G++
Sbjct: 40 EYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSIL 99
Query: 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
+ + ++ + + +A L +LH + I H D+KP+N+
Sbjct: 100 SHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENI----LCEHPNQVSP 152
Query: 583 XKIADFGLAKLLK--KDQTRTST----MIRGTMGYMAPEWLRNAPVTAKV-----DVYSF 631
KI DFGL +K D + ST G+ YMAPE + A + D++S
Sbjct: 153 VKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 632 GVML 635
GV+L
Sbjct: 213 GVIL 216
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 15/131 (11%)
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIA-RGLLYLHEECETQIIHCDIKPQNVXXXX 572
EL++ G+L L +Q + R LG A GL YLH +I+H D+K NV
Sbjct: 144 ELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSS 199
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM----IRGTMGYMAPEWLRNAPVTAKVDV 628
+ DFG A L+ D S + I GT +MAPE + P AKVD+
Sbjct: 200 DGSRAA------LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDI 253
Query: 629 YSFGVMLLEII 639
+S M+L ++
Sbjct: 254 WSSCCMMLHML 264
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 15/131 (11%)
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIA-RGLLYLHEECETQIIHCDIKPQNVXXXX 572
EL++ G+L L +Q + R LG A GL YLH +I+H D+K NV
Sbjct: 130 ELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSS 185
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM----IRGTMGYMAPEWLRNAPVTAKVDV 628
+ DFG A L+ D S + I GT +MAPE + P AKVD+
Sbjct: 186 DGSRAA------LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDI 239
Query: 629 YSFGVMLLEII 639
+S M+L ++
Sbjct: 240 WSSCCMMLHML 250
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVE 538
++ +E+Q++ H LV L ++ +V +L+ G L L +Q + ++ V+
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEETVK 118
Query: 539 IAL-GIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
+ + + L YL + +IIH D+KP N+ I DF +A +L +
Sbjct: 119 LFICELVMALDYLQNQ---RIIHRDMKPDNI-------LLDEHGHVHITDFNIAAMLPR- 167
Query: 598 QTRTSTMIRGTMGYMAPEWL---RNAPVTAKVDVYSFGVMLLEIIFCKR 643
+T+ +TM GT YMAPE + A + VD +S GV E++ +R
Sbjct: 168 ETQITTMA-GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 77/198 (38%), Gaps = 25/198 (12%)
Query: 451 LREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
+R N GQ+ V + + K T G + RE + H ++V+LL
Sbjct: 42 VRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG 101
Query: 508 HQLLVYELMKNGTL---------SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQI 558
+V+E M L + F++ + + + R I L Y H+ I
Sbjct: 102 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALRYCHD---NNI 153
Query: 559 IHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR 618
IH D+KP V K+ FG+A L + + GT +MAPE ++
Sbjct: 154 IHRDVKPHCVLLASKENSAPV----KLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVK 208
Query: 619 NAPVTAKVDVYSFGVMLL 636
P VDV+ GV+L
Sbjct: 209 REPYGKPVDVWGCGVILF 226
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 434 PKPKPPEINMKVFSYQELRE----ATNVF----------DGQEVEVAV--KQLEKVTGDG 477
P K ++ ++F ELR+ + VF +G+ +++ V K +E +G
Sbjct: 16 PSEKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ 75
Query: 478 E-KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKR 536
++ + IG H ++V+LLG C + QL V + + G+L + RQ +
Sbjct: 76 SFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHV-RQHRGALGPQ 133
Query: 537 VEIALG--IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLL 594
+ + G IA+G+ YL E ++H ++ +NV ++ADFG+A LL
Sbjct: 134 LLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQV-------QVADFGVADLL 183
Query: 595 KKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
D + + + + +MA E + T + DV+S+GV + E++
Sbjct: 184 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 38/196 (19%)
Query: 464 EVAVKQ--LEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+VA+K+ LEK ++ L+E+Q + + HH N+V + ++ LV +L+ G++
Sbjct: 37 KVAIKRINLEKCQTSMDE-LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 95
Query: 522 --------------SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQN 567
S L I T I + GL YLH+ + IH D+K N
Sbjct: 96 LDIIKHIVAKGEHKSGVLDESTIAT------ILREVLEGLEYLHKNGQ---IHRDVKAGN 146
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIR----GTMGYMAPEWLRNAP-V 622
+ +IADFG++ L T +R GT +MAPE +
Sbjct: 147 I-------LLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY 199
Query: 623 TAKVDVYSFGVMLLEI 638
K D++SFG+ +E+
Sbjct: 200 DFKADIWSFGITAIEL 215
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 15/131 (11%)
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIA-RGLLYLHEECETQIIHCDIKPQNVXXXX 572
EL++ G+L L +Q + R LG A GL YLH +I+H D+K NV
Sbjct: 146 ELLEGGSLGQ-LIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSS 201
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTM----IRGTMGYMAPEWLRNAPVTAKVDV 628
+ DFG A L+ D S + I GT +MAPE + P AKVD+
Sbjct: 202 DGSRAA------LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDI 255
Query: 629 YSFGVMLLEII 639
+S M+L ++
Sbjct: 256 WSSCCMMLHML 266
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 38/196 (19%)
Query: 464 EVAVKQ--LEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+VA+K+ LEK ++ L+E+Q + + HH N+V + ++ LV +L+ G++
Sbjct: 42 KVAIKRINLEKCQTSMDE-LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
Query: 522 --------------SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQN 567
S L I T I + GL YLH+ + IH D+K N
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIAT------ILREVLEGLEYLHKNGQ---IHRDVKAGN 151
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIR----GTMGYMAPEWLRNAP-V 622
+ +IADFG++ L T +R GT +MAPE +
Sbjct: 152 I-------LLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY 204
Query: 623 TAKVDVYSFGVMLLEI 638
K D++SFG+ +E+
Sbjct: 205 DFKADIWSFGITAIEL 220
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 77/198 (38%), Gaps = 25/198 (12%)
Query: 451 LREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
+R N GQ+ V + + K T G + RE + H ++V+LL
Sbjct: 40 VRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG 99
Query: 508 HQLLVYELMKNGTL---------SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQI 558
+V+E M L + F++ + + + R I L Y H+ I
Sbjct: 100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALRYCHD---NNI 151
Query: 559 IHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR 618
IH D+KP V K+ FG+A L + + GT +MAPE ++
Sbjct: 152 IHRDVKPHCVLLASKENSAPV----KLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVK 206
Query: 619 NAPVTAKVDVYSFGVMLL 636
P VDV+ GV+L
Sbjct: 207 REPYGKPVDVWGCGVILF 224
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 30/193 (15%)
Query: 464 EVAVKQLEKVTGDG----------EKSFLREVQVIGR-THHKNLVQLLGFCIEQNHQLLV 512
E AVK ++ VTG G ++ L+EV ++ + + H N++QL LV
Sbjct: 44 EYAVKIID-VTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
++LMK G L +L + + + +I + + LH + I+H D+KP+N+
Sbjct: 103 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENI---- 155
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR-----NAPVTAK-V 626
K+ DFG + L + S + GT Y+APE + N P K V
Sbjct: 156 ---LLDDDMNIKLTDFGFSCQLDPGEKLRS--VCGTPSYLAPEIIECSMNDNHPGYGKEV 210
Query: 627 DVYSFGVMLLEII 639
D++S GV++ ++
Sbjct: 211 DMWSTGVIMYTLL 223
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 28/197 (14%)
Query: 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFC 503
K+F+ + L++A V + ++ E++ L EV+ H +V L+ +
Sbjct: 46 KIFAMKVLKKAMIVRNAKDT---------AHTKAERNILEEVK------HPFIVDLI-YA 89
Query: 504 IEQNHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
+ +L L+ E + G L L R+ I D I+ L +LH++ II+ D
Sbjct: 90 FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRD 146
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV 622
+KP+N+ K+ DFGL K D T T GT+ YMAPE L +
Sbjct: 147 LKPENIMLNHQGHV-------KLTDFGLCKESIHDGTVTHXFC-GTIEYMAPEILMRSGH 198
Query: 623 TAKVDVYSFGVMLLEII 639
VD +S G ++ +++
Sbjct: 199 NRAVDWWSLGALMYDML 215
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 26/167 (15%)
Query: 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKR---- 536
F E+Q+I ++ + G + ++YE M+N S F + DK
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMEND--SILKFDEYFFVLDKNYTCF 147
Query: 537 --VEIALGIARGLL----YLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGL 590
+++ I + +L Y+H E I H D+KP N+ K++DFG
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNI-------LMDKNGRVKLSDFGE 198
Query: 591 AKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVT--AKVDVYSFGVML 635
++ + + + S RGT +M PE+ N AKVD++S G+ L
Sbjct: 199 SEYMVDKKIKGS---RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 25/162 (15%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA--- 540
E++++ + +H ++++ F +++ +V ELM+ G L F + + +KR++ A
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----FDKVVG--NKRLKEATCK 242
Query: 541 LGIARGLL---YLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
L + LL YLHE IIH D+KP+NV KI DFG +K+L
Sbjct: 243 LYFYQMLLAVQYLHE---NGIIHRDLKPENV----LLSSQEEDCLIKITDFGHSKIL--G 293
Query: 598 QTRTSTMIRGTMGYMAPEWLRN---APVTAKVDVYSFGVMLL 636
+T + GT Y+APE L + A VD +S GV+L
Sbjct: 294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 30/196 (15%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQL--------------LGFCIEQNHQL 510
VA+K++ K LRE+++I R H N+V++ +G E N
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIAL-GIARGLLYLHEECETQIIHCDIKPQNVX 569
+V E M+ + ++ P ++ + + + RGL Y+H ++H D+KP N+
Sbjct: 99 IVQEYMETDLANVL---EQGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANL- 151
Query: 570 XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRG--TMGYMAPEWLRNA-PVTAKV 626
KI DFGLA+++ + + G T Y +P L + T +
Sbjct: 152 -----FINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAI 206
Query: 627 DVYSFGVMLLEIIFCK 642
D+++ G + E++ K
Sbjct: 207 DMWAAGCIFAEMLTGK 222
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
SY + +A + GQ V A+KQ+ V D ++ ++E+ ++ + ++V+ G +
Sbjct: 41 SYGSVYKAIHKETGQIV--AIKQV-PVESDLQE-IIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 507 NHQLLVYELMKNGTLSAFL-FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
+V E G++S + R + T D+ I +GL YLH + IH DIK
Sbjct: 97 TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKA 153
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAK 625
N+ K+ADFG+A L + + +I GT +MAPE ++
Sbjct: 154 GNILLNTEGHA-------KLADFGVAGQLTDXMAKRNXVI-GTPFWMAPEVIQEIGYNCV 205
Query: 626 VDVYSFGVMLLEI 638
D++S G+ +E+
Sbjct: 206 ADIWSLGITAIEM 218
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 25/162 (15%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA--- 540
E++++ + +H ++++ F +++ +V ELM+ G L F + + +KR++ A
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----FDKVVG--NKRLKEATCK 256
Query: 541 LGIARGLL---YLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
L + LL YLHE IIH D+KP+NV KI DFG +K+L
Sbjct: 257 LYFYQMLLAVQYLHE---NGIIHRDLKPENV----LLSSQEEDCLIKITDFGHSKIL--G 307
Query: 598 QTRTSTMIRGTMGYMAPEWLRN---APVTAKVDVYSFGVMLL 636
+T + GT Y+APE L + A VD +S GV+L
Sbjct: 308 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 448 YQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+ +++ A ++ G+ V A+K ++K T G E++ + H+++ QL
Sbjct: 23 FAKVKLACHILTGEMV--AIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETA 80
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
N +V E G L ++ Q+ + ++ + I + Y+H + H D+KP+
Sbjct: 81 NKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYA---HRDLKPE 137
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR-NAPVTAK 625
N+ K+ DFGL K ++ G++ Y APE ++ + + ++
Sbjct: 138 NLLFDEYHKL-------KLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSE 190
Query: 626 VDVYSFGVMLLEIIFC 641
DV+S G+ LL ++ C
Sbjct: 191 ADVWSMGI-LLYVLMC 205
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 30/193 (15%)
Query: 464 EVAVKQLEKVTGDG----------EKSFLREVQVIGR-THHKNLVQLLGFCIEQNHQLLV 512
E AVK ++ VTG G ++ L+EV ++ + + H N++QL LV
Sbjct: 31 EYAVKIID-VTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 89
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
++LMK G L +L + + + +I + + LH + I+H D+KP+N+
Sbjct: 90 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENI---- 142
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR-----NAPVTAK-V 626
K+ DFG + L D + GT Y+APE + N P K V
Sbjct: 143 ---LLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV 197
Query: 627 DVYSFGVMLLEII 639
D++S GV++ ++
Sbjct: 198 DMWSTGVIMYTLL 210
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y E+ +A + + V + +LE + +REV ++ H+N+++L I
Sbjct: 46 TYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS-VIHH 104
Query: 507 NHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEE----CET-QIIH 560
NH+L L++E +N L ++ DK ++++ + + LY C + + +H
Sbjct: 105 NHRLHLIFEYAEND-LKKYM--------DKNPDVSMRVIKSFLYQLINGVNFCHSRRCLH 155
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620
D+KPQN+ KI DFGLA+ R T T+ Y PE L +
Sbjct: 156 RDLKPQNL--LLSVSDASETPVLKIGDFGLARAFGI-PIRQFTHEIITLWYRPPEILLGS 212
Query: 621 -PVTAKVDVYSFGVMLLEIIF 640
+ VD++S + E++
Sbjct: 213 RHYSTSVDIWSIACIWAEMLM 233
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 30/193 (15%)
Query: 464 EVAVKQLEKVTGDG----------EKSFLREVQVIGR-THHKNLVQLLGFCIEQNHQLLV 512
E AVK ++ VTG G ++ L+EV ++ + + H N++QL LV
Sbjct: 44 EYAVKIID-VTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
++LMK G L +L + + + +I + + LH + I+H D+KP+N+
Sbjct: 103 FDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENI---- 155
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR-----NAPVTAK-V 626
K+ DFG + L D + GT Y+APE + N P K V
Sbjct: 156 ---LLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV 210
Query: 627 DVYSFGVMLLEII 639
D++S GV++ ++
Sbjct: 211 DMWSTGVIMYTLL 223
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 25/162 (15%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA--- 540
E++++ + +H ++++ F +++ +V ELM+ G L F + + +KR++ A
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----FDKVV--GNKRLKEATCK 117
Query: 541 LGIARGLL---YLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
L + LL YLHE IIH D+KP+NV KI DFG +K+L
Sbjct: 118 LYFYQMLLAVQYLHE---NGIIHRDLKPENV----LLSSQEEDCLIKITDFGHSKIL--G 168
Query: 598 QTRTSTMIRGTMGYMAPEWLRN---APVTAKVDVYSFGVMLL 636
+T + GT Y+APE L + A VD +S GV+L
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 25/162 (15%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA--- 540
E++++ + +H ++++ F +++ +V ELM+ G L F + + +KR++ A
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----FDKVV--GNKRLKEATCK 116
Query: 541 LGIARGLL---YLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
L + LL YLHE IIH D+KP+NV KI DFG +K+L
Sbjct: 117 LYFYQMLLAVQYLHE---NGIIHRDLKPENV----LLSSQEEDCLIKITDFGHSKIL--G 167
Query: 598 QTRTSTMIRGTMGYMAPEWLRN---APVTAKVDVYSFGVMLL 636
+T + GT Y+APE L + A VD +S GV+L
Sbjct: 168 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 25/162 (15%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA--- 540
E++++ + +H ++++ F +++ +V ELM+ G L F + + +KR++ A
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----FDKVV--GNKRLKEATCK 117
Query: 541 LGIARGLL---YLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
L + LL YLHE IIH D+KP+NV KI DFG +K+L
Sbjct: 118 LYFYQMLLAVQYLHE---NGIIHRDLKPENV----LLSSQEEDCLIKITDFGHSKIL--G 168
Query: 598 QTRTSTMIRGTMGYMAPEWLRN---APVTAKVDVYSFGVMLL 636
+T + GT Y+APE L + A VD +S GV+L
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 25/162 (15%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA--- 540
E++++ + +H ++++ F +++ +V ELM+ G L F + + +KR++ A
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----FDKVV--GNKRLKEATCK 117
Query: 541 LGIARGLL---YLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
L + LL YLHE IIH D+KP+NV KI DFG +K+L
Sbjct: 118 LYFYQMLLAVQYLHE---NGIIHRDLKPENV----LLSSQEEDCLIKITDFGHSKIL--G 168
Query: 598 QTRTSTMIRGTMGYMAPEWLRN---APVTAKVDVYSFGVMLL 636
+T + GT Y+APE L + A VD +S GV+L
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 25/162 (15%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA--- 540
E++++ + +H ++++ F +++ +V ELM+ G L F + + +KR++ A
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGEL----FDKVV--GNKRLKEATCK 123
Query: 541 LGIARGLL---YLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
L + LL YLHE IIH D+KP+NV KI DFG +K+L
Sbjct: 124 LYFYQMLLAVQYLHE---NGIIHRDLKPENV----LLSSQEEDCLIKITDFGHSKIL--G 174
Query: 598 QTRTSTMIRGTMGYMAPEWLRN---APVTAKVDVYSFGVMLL 636
+T + GT Y+APE L + A VD +S GV+L
Sbjct: 175 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFC 503
S+ +++ A + GQ+V A+K + K D + RE+ + H ++++L
Sbjct: 25 SFGKVKLAYHTTTGQKV--ALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 82
Query: 504 IEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
++ ++V E N + R ++ + R I + Y H +I+H D+
Sbjct: 83 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KIVHRDL 138
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVT 623
KP+N+ KIADFGL+ ++ ++ G+ Y APE +
Sbjct: 139 KPENL-------LLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYA 189
Query: 624 A-KVDVYSFGVMLLEIIFCKR 643
+VDV+S GV+L ++ C+R
Sbjct: 190 GPEVDVWSCGVILY-VMLCRR 209
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
EL++ G+L + Q D+ + GL YLH +I+H D+K NV
Sbjct: 165 ELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSD 221
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTM----IRGTMGYMAPEWLRNAPVTAKVDVY 629
+ DFG A L+ D S + I GT +MAPE + AKVDV+
Sbjct: 222 GSHAA------LCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 275
Query: 630 SFGVMLLEII 639
S M+L ++
Sbjct: 276 SSCCMMLHML 285
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFC 503
S+ +++ A + GQ+V A+K + K D + RE+ + H ++++L
Sbjct: 20 SFGKVKLAYHTTTGQKV--ALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 77
Query: 504 IEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
++ ++V E N + R ++ + R I + Y H +I+H D+
Sbjct: 78 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KIVHRDL 133
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVT 623
KP+N+ KIADFGL+ ++ ++ G+ Y APE +
Sbjct: 134 KPENL-------LLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYA 184
Query: 624 A-KVDVYSFGVMLLEIIFCKR 643
+VDV+S GV+L ++ C+R
Sbjct: 185 GPEVDVWSCGVILY-VMLCRR 204
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 25/180 (13%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK------IADFGLAKLLKK 596
IA G+ +LH +IIH D+KPQN+ I+DFGL K L
Sbjct: 124 IASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 597 DQTRTSTMIR---GTMGYMAPEWLRNA-------PVTAKVDVYSFGVMLLEIIFCKRHTE 646
Q+ T + GT G+ APE L + +T +D++S G + I+ +H
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 647 LHRVD-EPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
+ E + G+ D + C+ +L A + I+ + I P RP+ +VL+
Sbjct: 241 GDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQM----IDHDPLKRPTAMKVLR 295
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFC 503
S+ +++ A + GQ+V A+K + K D + RE+ + H ++++L
Sbjct: 16 SFGKVKLAYHTTTGQKV--ALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 73
Query: 504 IEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
++ ++V E N + R ++ + R I + Y H +I+H D+
Sbjct: 74 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KIVHRDL 129
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ-TRTSTMIRGTMGYMAPEWLRNAPV 622
KP+N+ KIADFGL+ ++ +TS G+ Y APE +
Sbjct: 130 KPENL-------LLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVISGKLY 179
Query: 623 TA-KVDVYSFGVMLLEIIFCKR 643
+VDV+S GV+L ++ C+R
Sbjct: 180 AGPEVDVWSCGVILY-VMLCRR 200
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-----EIPTWDKRVE 538
E+ V+ + H NL+QL +N +LV E + G L + + E+ T +
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT----IL 191
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ 598
I G+ ++H + I+H D+KP+N+ KI DFGLA+ K +
Sbjct: 192 FMKQICEGIRHMH---QMYILHLDLKPENI-----LCVNRDAKQIKIIDFGLARRYKPRE 243
Query: 599 TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
GT ++APE + V+ D++S GV+
Sbjct: 244 KLKVNF--GTPEFLAPEVVNYDFVSFPTDMWSVGVI 277
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 466 AVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
A+K L+K V D L E +V+ + H L L + V E G L
Sbjct: 177 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 236
Query: 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
L R+ + + D+ I L YLH E +++ D+K +N+
Sbjct: 237 FHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHI------ 288
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
KI DFGL K KD T GT Y+APE L + VD + GV++ E++ C
Sbjct: 289 -KITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CG 345
Query: 643 R 643
R
Sbjct: 346 R 346
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 460 GQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
G+ V VAVK L+ + F+REV + H+NL++L G + + +V EL
Sbjct: 44 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 102
Query: 517 KNGTLSAFLFRQE----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
G+L L + + + T + A+ +A G+ YL + + IH D+ +N+
Sbjct: 103 PLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLESK---RFIHRDLAARNL---- 152
Query: 573 XXXXXXXXXXXKIADFGLAKLLKK--DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYS 630
KI DFGL + L + D + + APE L+ + D +
Sbjct: 153 ---LLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 209
Query: 631 FGVMLLEII 639
FGV L E+
Sbjct: 210 FGVTLWEMF 218
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFC 503
S+ +++ A + GQ+V A+K + K D + RE+ + H ++++L
Sbjct: 26 SFGKVKLAYHTTTGQKV--ALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 83
Query: 504 IEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
++ ++V E N + R ++ + R I + Y H +I+H D+
Sbjct: 84 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KIVHRDL 139
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ-TRTSTMIRGTMGYMAPEWLRNAPV 622
KP+N+ KIADFGL+ ++ +TS G+ Y APE +
Sbjct: 140 KPENL-------LLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVISGKLY 189
Query: 623 TA-KVDVYSFGVMLLEIIFCKR 643
+VDV+S GV+L ++ C+R
Sbjct: 190 AGPEVDVWSCGVILY-VMLCRR 210
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 460 GQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
G+ V VAVK L+ + F+REV + H+NL++L G + + +V EL
Sbjct: 38 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 96
Query: 517 KNGTLSAFLFRQE----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
G+L L + + + T + A+ +A G+ YL + + IH D+ +N+
Sbjct: 97 PLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLESK---RFIHRDLAARNL---- 146
Query: 573 XXXXXXXXXXXKIADFGLAKLLKK--DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYS 630
KI DFGL + L + D + + APE L+ + D +
Sbjct: 147 ---LLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 203
Query: 631 FGVMLLEII 639
FGV L E+
Sbjct: 204 FGVTLWEMF 212
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 466 AVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
A+K L+K V D L E +V+ + H L L + V E G L
Sbjct: 180 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 239
Query: 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
L R+ + + D+ I L YLH E +++ D+K +N+
Sbjct: 240 FHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHI------ 291
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
KI DFGL K KD T GT Y+APE L + VD + GV++ E++ C
Sbjct: 292 -KITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CG 348
Query: 643 R 643
R
Sbjct: 349 R 349
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 460 GQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
G+ V VAVK L+ + F+REV + H+NL++L G + + +V EL
Sbjct: 34 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 92
Query: 517 KNGTLSAFLFRQE----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
G+L L + + + T + A+ +A G+ YL + + IH D+ +N+
Sbjct: 93 PLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLESK---RFIHRDLAARNL---- 142
Query: 573 XXXXXXXXXXXKIADFGLAKLLKK--DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYS 630
KI DFGL + L + D + + APE L+ + D +
Sbjct: 143 ---LLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 631 FGVMLLEII 639
FGV L E+
Sbjct: 200 FGVTLWEMF 208
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 28/151 (18%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEEC------ETQIIHCDI 563
LLV E NG+L +L W +A + RGL YLH E + I H D+
Sbjct: 88 LLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDL 146
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLA------KLLKKDQTRTSTMIR-GTMGYMAPEW 616
+NV I+DFGL+ +L++ + + + GT+ YMAPE
Sbjct: 147 NSRNVLVKNDGTCV-------ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEV 199
Query: 617 LRNA-------PVTAKVDVYSFGVMLLEIIF 640
L A +VD+Y+ G++ EI
Sbjct: 200 LEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 28/175 (16%)
Query: 476 DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDK 535
+GE + +E+Q++ R HKN++QL+ + Q + Y +M+ +P +K
Sbjct: 48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM-YMVMEYCVCGMQEMLDSVP--EK 104
Query: 536 RVEIALG------IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFG 589
R + + GL YLH + I+H DIKP N+ KI+ G
Sbjct: 105 RFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNL-------LLTTGGTLKISALG 154
Query: 590 LAKLLK----KDQTRTSTMIRGTMGYMAPEWLRNAPVTA--KVDVYSFGVMLLEI 638
+A+ L D RTS +G+ + PE + KVD++S GV L I
Sbjct: 155 VAEALHPFAADDTCRTS---QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNI 206
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 482 LREVQVIGRTHHKNLVQLLGFCIEQN----HQLLVYELMKNGTLSAFLFRQEIPTWDKRV 537
+RE +V+ + +HKN+V+L F IE+ H++L+ E G+L L
Sbjct: 55 MREFEVLKKLNHKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPES 112
Query: 538 EIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
E + + + ++ E I+H +IKP N+ K+ DFG A+ L+ D
Sbjct: 113 EFLIVLRDVVGGMNHLRENGIVHRNIKPGNI---MRVIGEDGQSVYKLTDFGAARELEDD 169
Query: 598 QTRTSTMIRGTMGYMAPEWLRNAPVT--------AKVDVYSFGV 633
+ S + GT Y+ P+ A + A VD++S GV
Sbjct: 170 EQFVS--LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 462 EVEVAVKQLEKVTGDGE-KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520
++ V +K +E +G ++ + IG H ++V+LLG C + QL V + + G+
Sbjct: 42 KIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGS 100
Query: 521 LSAFLFRQEIPTWDKRVEIALG--IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
L + RQ ++ + G IA+G+ YL E ++H ++ +NV
Sbjct: 101 LLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQV-- 154
Query: 579 XXXXXKIADFGLAKLLKKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
++ADFG+A LL D + + + + +MA E + T + DV+S+GV + E
Sbjct: 155 -----QVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWE 209
Query: 638 II 639
++
Sbjct: 210 LM 211
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 460 GQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
G+ V VAVK L+ + F+REV + H+NL++L G + + +V EL
Sbjct: 34 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 92
Query: 517 KNGTLSAFLFRQE----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
G+L L + + + T + A+ +A G+ YL + + IH D+ +N+
Sbjct: 93 PLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLESK---RFIHRDLAARNL---- 142
Query: 573 XXXXXXXXXXXKIADFGLAKLLKK--DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYS 630
KI DFGL + L + D + + APE L+ + D +
Sbjct: 143 ---LLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 631 FGVMLLEII 639
FGV L E+
Sbjct: 200 FGVTLWEMF 208
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 460 GQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
G+ V VAVK L+ + F+REV + H+NL++L G + + +V EL
Sbjct: 44 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 102
Query: 517 KNGTLSAFLFRQE----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
G+L L + + + T + A+ +A G+ YL + + IH D+ +N+
Sbjct: 103 PLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLESK---RFIHRDLAARNL---- 152
Query: 573 XXXXXXXXXXXKIADFGLAKLLKK--DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYS 630
KI DFGL + L + D + + APE L+ + D +
Sbjct: 153 ---LLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 209
Query: 631 FGVMLLEII 639
FGV L E+
Sbjct: 210 FGVTLWEMF 218
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGI 543
E+ + + ++V GF + + +V E+ + +L R++ T +
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 544 ARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTST 603
+G+ YLH ++IH D+K N+ KI DFGLA ++ D R T
Sbjct: 152 IQGVQYLHN---NRVIHRDLKLGNLFLNDDMDV-------KIGDFGLATKIEFDGERKKT 201
Query: 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
+ GT Y+APE L + +VD++S G +L ++ K
Sbjct: 202 LC-GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 466 AVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
A+K L+K V D L E +V+ + H L L + V E G L
Sbjct: 39 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 98
Query: 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
L R+ + + D+ I L YLH E +++ D+K +N+
Sbjct: 99 FHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHI------ 150
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
KI DFGL K KD T GT Y+APE L + VD + GV++ E++ C
Sbjct: 151 -KITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CG 207
Query: 643 R 643
R
Sbjct: 208 R 208
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 79/197 (40%), Gaps = 28/197 (14%)
Query: 461 QEVEVAVKQL-EKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
Q VA+K L +K G + F E + R H N+V LLG + +++ +G
Sbjct: 38 QTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHG 97
Query: 520 TLSAFLFRQEI-----PTWDKR-----------VEIALGIARGLLYLHEECETQIIHCDI 563
L FL + T D R V + IA G+ YL ++H D+
Sbjct: 98 DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDL 154
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPV 622
+NV KI+D GL + + D + + +MAPE +
Sbjct: 155 ATRNV-------LVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKF 207
Query: 623 TAKVDVYSFGVMLLEII 639
+ D++S+GV+L E+
Sbjct: 208 SIDSDIWSYGVVLWEVF 224
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 460 GQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
G+ V VAVK L+ + F+REV + H+NL++L G + + +V EL
Sbjct: 38 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 96
Query: 517 KNGTLSAFLFRQE----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
G+L L + + + T + A+ +A G+ YL + + IH D+ +N+
Sbjct: 97 PLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLESK---RFIHRDLAARNL---- 146
Query: 573 XXXXXXXXXXXKIADFGLAKLLKK--DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYS 630
KI DFGL + L + D + + APE L+ + D +
Sbjct: 147 ---LLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 203
Query: 631 FGVMLLEII 639
FGV L E+
Sbjct: 204 FGVTLWEMF 212
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
EL++ G+L + Q D+ + GL YLH +I+H D+K NV
Sbjct: 146 ELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSD 202
Query: 574 XXXXXXXXXXKIADFGLAKLLKKD----QTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVY 629
+ DFG A L+ D T I GT +MAPE + AKVDV+
Sbjct: 203 GSHAA------LCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 256
Query: 630 SFGVMLLEII 639
S M+L ++
Sbjct: 257 SSCCMMLHML 266
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 466 AVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
A+K L+K V D L E +V+ + H L L + V E G L
Sbjct: 38 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 97
Query: 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
L R+ + + D+ I L YLH E +++ D+K +N+
Sbjct: 98 FHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHI------ 149
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
KI DFGL K KD T GT Y+APE L + VD + GV++ E++ C
Sbjct: 150 -KITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CG 206
Query: 643 R 643
R
Sbjct: 207 R 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 466 AVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
A+K L+K V D L E +V+ + H L L + V E G L
Sbjct: 37 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF 96
Query: 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
L R+ + + D+ I L YLH E +++ D+K +N+
Sbjct: 97 FHLSRERVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHI------ 148
Query: 583 XKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
KI DFGL K KD T GT Y+APE L + VD + GV++ E++ C
Sbjct: 149 -KITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CG 205
Query: 643 R 643
R
Sbjct: 206 R 206
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 79/197 (40%), Gaps = 28/197 (14%)
Query: 461 QEVEVAVKQL-EKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
Q VA+K L +K G + F E + R H N+V LLG + +++ +G
Sbjct: 55 QTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHG 114
Query: 520 TLSAFLFRQEI-----PTWDKR-----------VEIALGIARGLLYLHEECETQIIHCDI 563
L FL + T D R V + IA G+ YL ++H D+
Sbjct: 115 DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDL 171
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAK-LLKKDQTRTSTMIRGTMGYMAPEWLRNAPV 622
+NV KI+D GL + + D + + +MAPE +
Sbjct: 172 ATRNV-------LVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKF 224
Query: 623 TAKVDVYSFGVMLLEII 639
+ D++S+GV+L E+
Sbjct: 225 SIDSDIWSYGVVLWEVF 241
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 23/189 (12%)
Query: 460 GQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516
G+ V VAVK L+ + F+REV + H+NL++L G + + +V EL
Sbjct: 34 GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELA 92
Query: 517 KNGTLSAFLFRQE----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
G+L L + + + T + A+ +A G+ YL + + IH D+ +N+
Sbjct: 93 PLGSLLDRLRKHQGHFLLGTLSR---YAVQVAEGMGYLESK---RFIHRDLAARNL---- 142
Query: 573 XXXXXXXXXXXKIADFGLAKLLKK--DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYS 630
KI DFGL + L + D + + APE L+ + D +
Sbjct: 143 ---LLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 631 FGVMLLEII 639
FGV L E+
Sbjct: 200 FGVTLWEMF 208
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG- 542
E ++ +H +V+L + L+ + ++ G L L +E+ ++ V+ L
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAE 138
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
+A GL +LH II+ D+KP+N+ K+ DFGL+K D + +
Sbjct: 139 LALGLDHLHS---LGIIYRDLKPENILLDEEGHI-------KLTDFGLSKE-AIDHEKKA 187
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
GT+ YMAPE + + D +S+GV++ E++
Sbjct: 188 YSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEML 224
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
E AVK +EK G REV+++ + H+N+++L+ F E++ LV+E M+ G++
Sbjct: 40 EYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSIL 99
Query: 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXX 582
+ + ++ + + +A L +LH + I H D+KP+N+
Sbjct: 100 SHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENI----LCEHPNQVSP 152
Query: 583 XKIADFGLAKLLK--KDQTRTST----MIRGTMGYMAPEWLRNAPVTAKV-----DVYSF 631
KI DF L +K D + ST G+ YMAPE + A + D++S
Sbjct: 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 632 GVML 635
GV+L
Sbjct: 213 GVIL 216
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 15/195 (7%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +++ A ++ G+EV V + ++ + REV+++ +H N+V+L +
Sbjct: 19 NFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE 78
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQ-IIHCDIKP 565
LV E G + +L W K E A R ++ + C + I+H D+K
Sbjct: 79 KTLYLVMEYASGGEVFDYLVAH---GWMKEKE-ARAKFRQIVSAVQYCHQKFIVHRDLKA 134
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA- 624
+N+ KIADFG + + G+ Y APE +
Sbjct: 135 ENL-------LLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKKYDGP 185
Query: 625 KVDVYSFGVMLLEII 639
+VDV+S GV+L ++
Sbjct: 186 EVDVWSLGVILYTLV 200
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK------IADFGLAKLLKK 596
IA G+ +LH +IIH D+KPQN+ I+DFGL K L
Sbjct: 142 IASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 597 DQTRTSTMIR---GTMGYMAPEWLRNAP---VTAKVDVYSFGVMLLEIIFCKRHTELHRV 650
Q + GT G+ APE L + +T +D++S G + I+ +H +
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 258
Query: 651 D-EPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
E + G+ D + C+ +L A + I+ + I P RP+ +VL+
Sbjct: 259 SRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQM----IDHDPLKRPTAMKVLR 309
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK------IADFGLAKLLKK 596
IA G+ +LH +IIH D+KPQN+ I+DFGL K L
Sbjct: 142 IASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 597 DQTRTSTMIR---GTMGYMAPEWLRNAP---VTAKVDVYSFGVMLLEIIFCKRHTELHRV 650
Q + GT G+ APE L + +T +D++S G + I+ +H +
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 258
Query: 651 D-EPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
E + G+ D + C+ +L A + I+ + I P RP+ +VL+
Sbjct: 259 SRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQM----IDHDPLKRPTAMKVLR 309
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 482 LREVQVIGRTHHKNLVQLLGFCIEQN----HQLLVYELMKNGTLSAFLFRQEIPTWDKRV 537
+RE +V+ + +HKN+V+L F IE+ H++L+ E G+L L
Sbjct: 55 MREFEVLKKLNHKNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPES 112
Query: 538 EIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
E + + + ++ E I+H +IKP N+ K+ DFG A+ L+ D
Sbjct: 113 EFLIVLRDVVGGMNHLRENGIVHRNIKPGNI---MRVIGEDGQSVYKLTDFGAARELEDD 169
Query: 598 QTRTSTMIRGTMGYMAPEWLRNAPVT--------AKVDVYSFGV 633
+ + GT Y+ P+ A + A VD++S GV
Sbjct: 170 E--QFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG- 542
E ++ +H +V+L + L+ + ++ G L L +E+ ++ V+ L
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAE 134
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
+A L +LH II+ D+KP+N+ K+ DFGL+K D + +
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHI-------KLTDFGLSKE-SIDHEKKA 183
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
GT+ YMAPE + T D +SFGV++ E++
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ ++ +A N D + A+K++ + T + + L EV ++ +H+ +V+ +E+
Sbjct: 18 AFGQVVKARNALDSRYY--AIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLER 74
Query: 507 NH-------------QLLVYELMKNGTLSAFLFRQEI-PTWDKRVEIALGIARGLLYLHE 552
+ + E +NGTL + + + D+ + I L Y+H
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS 134
Query: 553 ECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-------LLKKDQ------T 599
+ IIH D+KP N+ KI DFGLAK +LK D +
Sbjct: 135 QG---IIHRDLKPMNIFIDESRNV-------KIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 600 RTSTMIRGTMGYMAPEWLR-NAPVTAKVDVYSFGVMLLEIIF 640
T GT Y+A E L K+D+YS G++ E+I+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 464 EVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLL-----GFCIEQNHQLLVYELM 516
+VAVK+L + + RE++++ H+N++ LL IE ++ + +
Sbjct: 55 KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 114
Query: 517 KNGTLSAFLFRQEIPTWDKRVE-IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXX 575
L+ + Q + D+ V+ + + RGL Y+H IIH D+KP NV
Sbjct: 115 MGADLNNIVKSQALS--DEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNV------- 162
Query: 576 XXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVM 634
+I DFGLA+ + D+ T + T Y APE + N VD++S G +
Sbjct: 163 AVNEDSELRILDFGLAR--QADEEMTGYV--ATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 635 LLEIIFCK 642
+ E++ K
Sbjct: 219 MAELLQGK 226
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 526 FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKI 585
F +E T + + + +ARG+ +L + IH D+ +N+ KI
Sbjct: 191 FYKEPITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVV-------KI 240
Query: 586 ADFGLAKLLKK--DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII---- 639
DFGLA+ + K D R R + +MAPE + + + K DV+S+GV+L EI
Sbjct: 241 CDFGLARDIYKNPDYVRKGD-TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGG 299
Query: 640 -----------FCKRHTELHRVDEPTLANGMI 660
FC R E R+ P + I
Sbjct: 300 SPYPGVQMDEDFCSRLREGMRMRAPEYSTPEI 331
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLV-YELMKNGTL 521
VAVK L E T K+ + E++++ HH N+V LLG C +Q L+V E K G L
Sbjct: 60 VAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNL 119
Query: 522 SAFL 525
S +L
Sbjct: 120 SNYL 123
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 17/182 (9%)
Query: 465 VAVKQLE----KVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519
VA+K+++ DG ++ LRE++++ H N++ LL +++ LV++ M+
Sbjct: 38 VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETD 97
Query: 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXX 579
+ T L +GL YLH+ I+H D+KP N+
Sbjct: 98 LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNL-------LLDE 147
Query: 580 XXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA-KVDVYSFGVMLLEI 638
K+ADFGLAK R T Y APE L A + VD+++ G +L E+
Sbjct: 148 NGVLKLADFGLAKSF-GSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
Query: 639 IF 640
+
Sbjct: 207 LL 208
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLG 501
+ V ++ +++ + G +V V + +K+ D RE+Q + H ++++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 502 FCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHC 561
+ +V E + G L ++ + + + I G+ Y H ++H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHR 140
Query: 562 DIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ-TRTSTMIRGTMGYMAPEWLRNA 620
D+KP+NV KIADFGL+ ++ + R S G+ Y APE +
Sbjct: 141 DLKPENV-------LLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEVISGR 190
Query: 621 PVTA-KVDVYSFGVMLLEII 639
+VD++S GV+L ++
Sbjct: 191 LYAGPEVDIWSSGVILYALL 210
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 25/194 (12%)
Query: 454 ATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLL 511
A + + ++ +QLE+V E LR QV G H +++ L+ + L
Sbjct: 123 AVKIMEVTAERLSPEQLEEVREATRRETHILR--QVAG---HPHIITLIDSYESSSFMFL 177
Query: 512 VYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXX 571
V++LM+ G L +L + + + I + + +LH I+H D+KP+N+
Sbjct: 178 VFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENI--- 231
Query: 572 XXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR------NAPVTAK 625
+++DFG + L+ + + GT GY+APE L+ + +
Sbjct: 232 ----LLDDNMQIRLSDFGFSCHLEPGEKLRE--LCGTPGYLAPEILKCSMDETHPGYGKE 285
Query: 626 VDVYSFGVMLLEII 639
VD+++ GV+L ++
Sbjct: 286 VDLWACGVILFTLL 299
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 15/195 (7%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +++ A ++ G+EV V + ++ + REV+++ +H N+V+L +
Sbjct: 26 NFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE 85
Query: 507 NHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
LV E G + +L + + R + I + Y H++ I+H D+K
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKA 141
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA- 624
+N+ KIADFG + + T G+ Y APE +
Sbjct: 142 ENL-------LLDADMNIKIADFGFSNEFTFG-NKLDTFC-GSPPYAAPELFQGKKYDGP 192
Query: 625 KVDVYSFGVMLLEII 639
+VDV+S GV+L ++
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG- 542
E ++ +H +V+L + L+ + ++ G L L +E+ ++ V+ L
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAE 134
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
+A L +LH II+ D+KP+N+ K+ DFGL+K D + +
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHI-------KLTDFGLSKE-SIDHEKKA 183
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
GT+ YMAPE + T D +SFGV++ E++
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 220
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG- 542
E ++ +H +V+L + L+ + ++ G L L +E+ ++ V+ L
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLAE 135
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
+A L +LH II+ D+KP+N+ K+ DFGL+K D + +
Sbjct: 136 LALALDHLHS---LGIIYRDLKPENILLDEEGHI-------KLTDFGLSKE-SIDHEKKA 184
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
GT+ YMAPE + T D +SFGV++ E++
Sbjct: 185 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 221
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 15/195 (7%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +++ A ++ G+EV V + ++ + REV+++ +H N+V+L +
Sbjct: 26 NFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE 85
Query: 507 NHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
LV E G + +L + + R + I + Y H++ I+H D+K
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKA 141
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA- 624
+N+ KIADFG + + T G+ Y APE +
Sbjct: 142 ENL-------LLDADMNIKIADFGFSNEFTFG-NKLDTFC-GSPPYAAPELFQGKKYDGP 192
Query: 625 KVDVYSFGVMLLEII 639
+VDV+S GV+L ++
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 491 THHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLY 549
++H LV L ++ V E + G L + RQ ++P R A I+ L Y
Sbjct: 110 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNY 168
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
LHE II+ D+K NV K+ D+G+ K + TST GT
Sbjct: 169 LHERG---IIYRDLKLDNVLLDSEGHI-------KLTDYGMCKEGLRPGDTTSTFC-GTP 217
Query: 610 GYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
Y+APE LR VD ++ GV++ E++
Sbjct: 218 NYIAPEILRGEDYGFSVDWWALGVLMFEMM 247
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E M G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ADFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------KVADFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E M G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ADFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------KVADFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 31/198 (15%)
Query: 459 DGQEVEVAVKQLEKVTGDGE-----------KSFLREVQVIGRTHHKNLVQLLGFCIE-- 505
D + + VA+K++ DG K LRE++++ HH N++ L +
Sbjct: 43 DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE 102
Query: 506 --QNHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIAL-GIARGLLYLHEECETQIIHC 561
H+L LV ELM+ L+ + Q I + ++ + I GL LH E ++H
Sbjct: 103 EPAMHKLYLVTELMRTD-LAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHR 158
Query: 562 DIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEW-LRNA 620
D+ P N+ I DF LA+ D +T + Y APE ++
Sbjct: 159 DLHPGNILLADNNDIT-------ICDFNLAREDTADANKTHYVTH--RWYRAPELVMQFK 209
Query: 621 PVTAKVDVYSFGVMLLEI 638
T VD++S G ++ E+
Sbjct: 210 GFTKLVDMWSAGCVMAEM 227
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 19/186 (10%)
Query: 460 GQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYEL 515
G E A+K L+K + D + + E +V+ + L C + +L V E
Sbjct: 42 GTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEY 101
Query: 516 MKNGTLSAFLFRQEIPTWD--KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
+ G L + Q++ + + V A I+ GL +LH+ II+ D+K NV
Sbjct: 102 VNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSE 156
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KIADFG+ K D T GT Y+APE + P VD +++GV
Sbjct: 157 GHI-------KIADFGMCKEHMMDGVTTREFC-GTPDYIAPEIIAYQPYGKSVDWWAYGV 208
Query: 634 MLLEII 639
+L E++
Sbjct: 209 LLYEML 214
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 31/198 (15%)
Query: 459 DGQEVEVAVKQLEKVTGDGE-----------KSFLREVQVIGRTHHKNLVQLLGFCIE-- 505
D + + VA+K++ DG K LRE++++ HH N++ L +
Sbjct: 43 DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE 102
Query: 506 --QNHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIAL-GIARGLLYLHEECETQIIHC 561
H+L LV ELM+ L+ + Q I + ++ + I GL LH E ++H
Sbjct: 103 EPAMHKLYLVTELMRTD-LAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHR 158
Query: 562 DIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEW-LRNA 620
D+ P N+ I DF LA+ D +T + Y APE ++
Sbjct: 159 DLHPGNILLADNNDIT-------ICDFNLAREDTADANKTHYVTH--RWYRAPELVMQFK 209
Query: 621 PVTAKVDVYSFGVMLLEI 638
T VD++S G ++ E+
Sbjct: 210 GFTKLVDMWSAGCVMAEM 227
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 15/195 (7%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +++ A ++ G+EV V + ++ + REV+++ +H N+V+L +
Sbjct: 26 NFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE 85
Query: 507 NHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
LV E G + +L + + R + I + Y H++ I+H D+K
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKA 141
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA- 624
+N+ KIADFG + + T G+ Y APE +
Sbjct: 142 ENL-------LLDADMNIKIADFGFSNEFTFG-NKLDTFC-GSPPYAAPELFQGKKYDGP 192
Query: 625 KVDVYSFGVMLLEII 639
+VDV+S GV+L ++
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 32/183 (17%)
Query: 478 EKSFLREVQVIGRT--HHKNLVQLLGFCIEQNH---QL-LVYELMKNGTLSAFLFRQEIP 531
EKS+ RE ++ H+N++ + + H QL L+ + G+L +L ++
Sbjct: 73 EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLT 129
Query: 532 TWDKR--VEIALGIARGLLYLHEEC-----ETQIIHCDIKPQNVXXXXXXXXXXXXXXXK 584
T D + I L IA GL +LH E + I H D+K +N+
Sbjct: 130 TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC------- 182
Query: 585 IADFGLAKLLKK--DQTRTSTMIR-GTMGYMAPEWLRNA------PVTAKVDVYSFGVML 635
IAD GLA + + +Q R GT YMAPE L +VD+++FG++L
Sbjct: 183 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 242
Query: 636 LEI 638
E+
Sbjct: 243 WEV 245
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGI 543
E+ + + ++V GF + + +V E+ + +L R++ T +
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 544 ARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTST 603
+G+ YLH ++IH D+K N+ KI DFGLA ++ D R
Sbjct: 152 IQGVQYLHN---NRVIHRDLKLGNLFLNDDMDV-------KIGDFGLATKIEFDGERKKX 201
Query: 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
+ GT Y+APE L + +VD++S G +L ++ K
Sbjct: 202 LC-GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGI 543
E+ + + ++V GF + + +V E+ + +L R++ T +
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 135
Query: 544 ARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTST 603
+G+ YLH ++IH D+K N+ KI DFGLA ++ D R
Sbjct: 136 IQGVQYLHN---NRVIHRDLKLGNLFLNDDMDV-------KIGDFGLATKIEFDGERKKD 185
Query: 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
+ GT Y+APE L + +VD++S G +L ++ K
Sbjct: 186 LC-GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGI 543
E+ + + ++V GF + + +V E+ + +L R++ T +
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 544 ARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTST 603
+G+ YLH ++IH D+K N+ KI DFGLA ++ D R
Sbjct: 152 IQGVQYLHN---NRVIHRDLKLGNLFLNDDMDV-------KIGDFGLATKIEFDGERKKD 201
Query: 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK 642
+ GT Y+APE L + +VD++S G +L ++ K
Sbjct: 202 LC-GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 15/195 (7%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +++ A ++ G+EV V + ++ + REV+++ +H N+V+L +
Sbjct: 26 NFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE 85
Query: 507 NHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
LV E G + +L + + R + I + Y H++ I+H D+K
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKA 141
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA- 624
+N+ KIADFG + + G Y APE +
Sbjct: 142 ENL-------LLDADMNIKIADFGFSNEFTFGNKLDAFC--GAPPYAAPELFQGKKYDGP 192
Query: 625 KVDVYSFGVMLLEII 639
+VDV+S GV+L ++
Sbjct: 193 EVDVWSLGVILYTLV 207
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 458 FDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRT--HHKNLVQLLGFCIEQNH---QL-L 511
+ G+ V V + + EKS+ RE ++ H+N++ + + H QL L
Sbjct: 29 WQGENVAVKI-----FSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83
Query: 512 VYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEEC-----ETQIIHCDIK 564
+ + G+L +L ++ T D + I L IA GL +LH E + I H D+K
Sbjct: 84 ITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK--DQTRTSTMIR-GTMGYMAPEWLRNA- 620
+N+ IAD GLA + + +Q R GT YMAPE L
Sbjct: 141 SKNILVKKNGQCC-------IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 621 -----PVTAKVDVYSFGVMLLEI 638
+VD+++FG++L E+
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 23/199 (11%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +++ A ++ G+EV V + ++ + REV+++ +H N+V+L +
Sbjct: 26 NFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETE 85
Query: 507 NHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
LV E G + +L + + R + I + Y H++ I+H D+K
Sbjct: 86 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKA 141
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLL----KKDQTRTSTMIRGTMGYMAPEWLRNAP 621
+N+ KIADFG + K D+ G+ Y APE +
Sbjct: 142 ENL-------LLDADMNIKIADFGFSNEFTFGNKLDE------FCGSPPYAAPELFQGKK 188
Query: 622 VTA-KVDVYSFGVMLLEII 639
+VDV+S GV+L ++
Sbjct: 189 YDGPEVDVWSLGVILYTLV 207
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 25/180 (13%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK------IADFGLAKLLKK 596
IA G+ +LH +IIH D+KPQN+ I+DFGL K L
Sbjct: 124 IASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 597 DQTRTSTMIR---GTMGYMAPEWLRNA-------PVTAKVDVYSFGVMLLEIIFCKRHTE 646
Q + GT G+ APE L + +T +D++S G + I+ +H
Sbjct: 181 GQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 647 LHRVD-EPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705
+ E + G+ D + C+ +L A + I+ + I P RP+ +VL+
Sbjct: 241 GDKYSRESNIIRGIFSLDE-MKCLHDRSLIAEATDLISQM----IDHDPLKRPTAMKVLR 295
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 37/203 (18%)
Query: 458 FDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRT--HHKNLVQLLGFCIEQNH---QL-L 511
+ G+ V V + + EKS+ RE ++ H+N++ + + H QL L
Sbjct: 29 WQGENVAVKI-----FSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83
Query: 512 VYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEEC-----ETQIIHCDIK 564
+ + G+L +L ++ T D + I L IA GL +LH E + I H D+K
Sbjct: 84 ITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKK--DQTRTSTMIR-GTMGYMAPEWLRNA- 620
+N+ IAD GLA + + +Q R GT YMAPE L
Sbjct: 141 SKNILVKKNGQCC-------IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 621 -----PVTAKVDVYSFGVMLLEI 638
+VD+++FG++L E+
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 464 EVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLL-----GFCIEQNHQLLVYELM 516
+VAVK+L + + RE++++ H+N++ LL IE ++ + +
Sbjct: 55 KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 114
Query: 517 KNGTLSAFLFRQEIPTWDKRVE-IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXX 575
L+ + Q + D+ V+ + + RGL Y+H IIH D+KP NV
Sbjct: 115 MGADLNNIVKCQALS--DEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNV------- 162
Query: 576 XXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVM 634
+I DFGLA+ + D+ T + T Y APE + N VD++S G +
Sbjct: 163 AVNEDSELRILDFGLAR--QADEEMTGYV--ATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 635 LLEIIFCK 642
+ E++ K
Sbjct: 219 MAELLQGK 226
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 15/195 (7%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +++ A +V G+EV V + ++ + REV+++ +H N+V+L +
Sbjct: 27 NFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE 86
Query: 507 NHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
LV E G + +L + + R + I + Y H++ I+H D+K
Sbjct: 87 KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVHRDLKA 142
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA- 624
+N+ KIADFG + + G+ Y APE +
Sbjct: 143 ENL-------LLDGDMNIKIADFGFSNEFTVGNKLDTFC--GSPPYAAPELFQGKKYDGP 193
Query: 625 KVDVYSFGVMLLEII 639
+VDV+S GV+L ++
Sbjct: 194 EVDVWSLGVILYTLV 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
E +V+ T H L L + + + +L V E G L L R+ + T ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I L YLH +++ DIK +N+ KI DFGL K D
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHI-------KITDFGLCKEGISDGATMK 163
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKR 643
T GT Y+APE L + VD + GV++ E++ C R
Sbjct: 164 TFC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGR 202
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 464 EVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGF-----CIEQNHQLLVYELM 516
+VAVK+L + + RE++++ H+N++ LL IE ++ + +
Sbjct: 47 KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 106
Query: 517 KNGTLSAFLFRQEIPTWDKRVE-IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXX 575
L+ + Q + D+ V+ + + RGL Y+H IIH D+KP NV
Sbjct: 107 MGADLNNIVKCQALS--DEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNV------- 154
Query: 576 XXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVM 634
+I DFGLA+ + D+ T + T Y APE + N VD++S G +
Sbjct: 155 AVNEDCELRILDFGLAR--QADEEMTGYV--ATRWYRAPEIMLNWMHYNQTVDIWSVGCI 210
Query: 635 LLEIIFCK 642
+ E++ K
Sbjct: 211 MAELLQGK 218
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
E +V+ T H L L + + + +L V E G L L R+ + T ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I L YLH +++ DIK +N+ KI DFGL K D
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHI-------KITDFGLCKEGISDGATMK 163
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKR 643
T GT Y+APE L + VD + GV++ E++ C R
Sbjct: 164 TFC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
E +V+ T H L L + + + +L V E G L L R+ + T ++
Sbjct: 58 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 116
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I L YLH +++ DIK +N+ KI DFGL K D
Sbjct: 117 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHI-------KITDFGLCKEGISDGATMK 166
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKR 643
T GT Y+APE L + VD + GV++ E++ C R
Sbjct: 167 TFC-GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGR 205
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 20/160 (12%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
+ +LM G L L + + + A I GL ++H +++ D+KP N+
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILL 325
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL-RNAPVTAKVDVY 629
+I+D GLA K + S GT GYMAPE L + + D +
Sbjct: 326 DEHGHV-------RISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWF 375
Query: 630 SFGVMLLEII-----FCKRHT-ELHRVDEPTLANGMILTD 663
S G ML +++ F + T + H +D TL + L D
Sbjct: 376 SLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
E QV+ + L + + +L L+ + + G L L ++E T + V+I +G
Sbjct: 108 ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT-EHEVQIYVG 166
Query: 543 -IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRT 601
I L +LH+ II+ DIK +N+ + DFGL+K D+T
Sbjct: 167 EIVLALEHLHK---LGIIYRDIKLENILLDSNGHVV-------LTDFGLSKEFVADETER 216
Query: 602 STMIRGTMGYMAPEWLR--NAPVTAKVDVYSFGVMLLEII 639
+ GT+ YMAP+ +R ++ VD +S GV++ E++
Sbjct: 217 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL 256
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 20/160 (12%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
+ +LM G L L + + + A I GL ++H +++ D+KP N+
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILL 325
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL-RNAPVTAKVDVY 629
+I+D GLA K + S GT GYMAPE L + + D +
Sbjct: 326 DEHGHV-------RISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWF 375
Query: 630 SFGVMLLEII-----FCKRHT-ELHRVDEPTLANGMILTD 663
S G ML +++ F + T + H +D TL + L D
Sbjct: 376 SLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 20/160 (12%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
+ +LM G L L + + + A I GL ++H +++ D+KP N+
Sbjct: 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILL 325
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL-RNAPVTAKVDVY 629
+I+D GLA K + S GT GYMAPE L + + D +
Sbjct: 326 DEHGHV-------RISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWF 375
Query: 630 SFGVMLLEII-----FCKRHT-ELHRVDEPTLANGMILTD 663
S G ML +++ F + T + H +D TL + L D
Sbjct: 376 SLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 415
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 20/160 (12%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
+ +LM G L L + + + A I GL ++H +++ D+KP N+
Sbjct: 268 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILL 324
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL-RNAPVTAKVDVY 629
+I+D GLA K + S GT GYMAPE L + + D +
Sbjct: 325 DEHGHV-------RISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWF 374
Query: 630 SFGVMLLEII-----FCKRHT-ELHRVDEPTLANGMILTD 663
S G ML +++ F + T + H +D TL + L D
Sbjct: 375 SLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 414
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 26/127 (20%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
+A+G+ +L + IH D+ +N+ KI DFGLA+ + KD
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVV-------KICDFGLARDIYKDPDYVR 249
Query: 603 TM-IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII---------------FCKRHTE 646
R + +MAPE + + T + DV+SFGV+L EI FC+R E
Sbjct: 250 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 309
Query: 647 LHRVDEP 653
R+ P
Sbjct: 310 GTRMRAP 316
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 53 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 112
Query: 522 SAFL 525
S +L
Sbjct: 113 STYL 116
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 26/127 (20%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
+A+G+ +L + IH D+ +N+ KI DFGLA+ + KD
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVV-------KICDFGLARDIYKDPDYVR 251
Query: 603 TM-IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII---------------FCKRHTE 646
R + +MAPE + + T + DV+SFGV+L EI FC+R E
Sbjct: 252 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 311
Query: 647 LHRVDEP 653
R+ P
Sbjct: 312 GTRMRAP 318
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 55 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 114
Query: 522 SAFL 525
S +L
Sbjct: 115 STYL 118
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 26/127 (20%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
+A+G+ +L + IH D+ +N+ KI DFGLA+ + KD
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVV-------KICDFGLARDIYKDPDYVR 256
Query: 603 TM-IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII---------------FCKRHTE 646
R + +MAPE + + T + DV+SFGV+L EI FC+R E
Sbjct: 257 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 316
Query: 647 LHRVDEP 653
R+ P
Sbjct: 317 GTRMRAP 323
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 522 SAFL 525
S +L
Sbjct: 120 STYL 123
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 26/127 (20%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
+A+G+ +L + IH D+ +N+ KI DFGLA+ + KD
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVV-------KICDFGLARDIYKDPDYVR 258
Query: 603 TM-IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII---------------FCKRHTE 646
R + +MAPE + + T + DV+SFGV+L EI FC+R E
Sbjct: 259 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 318
Query: 647 LHRVDEP 653
R+ P
Sbjct: 319 GTRMRAP 325
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 465 VAVKQL-EKVTGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLV-YELMKNGTL 521
VAVK L E T ++ + E+++ I HH N+V LLG C + L+V E K G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 522 SAFL 525
S +L
Sbjct: 122 STYL 125
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 16/119 (13%)
Query: 528 QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIAD 587
Q IP D +IA+ I + L +LH + +IH D+KP NV K+ D
Sbjct: 104 QTIPE-DILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNV-------LINALGQVKMCD 153
Query: 588 FGLAKLLKKDQTRTSTMIRGTMGYMAPEW----LRNAPVTAKVDVYSFGVMLLEIIFCK 642
FG++ L D + + G YMAPE L + K D++S G+ ++E+ +
Sbjct: 154 FGISGYLVDDVAK--DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 538 EIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
+IA+ I + L +LH + +IH D+KP NV K+ DFG++ L
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNV-------LINALGQVKMCDFGISGYLV-- 205
Query: 598 QTRTSTMIRGTMGYMAPEW----LRNAPVTAKVDVYSFGVMLLEIIFCK 642
+ T+ G YMAPE L + K D++S G+ ++E+ +
Sbjct: 206 DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 254
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 13/194 (6%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +++ A ++ G+EV V + ++ + REV++ +H N+V+L +
Sbjct: 26 NFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETE 85
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
LV E G + +L + I + Y H++ I+H D+K +
Sbjct: 86 KTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAE 142
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA-K 625
N+ KIADFG + + G Y APE + +
Sbjct: 143 NL-------LLDADXNIKIADFGFSNEFTFGNKLDAFC--GAPPYAAPELFQGKKYDGPE 193
Query: 626 VDVYSFGVMLLEII 639
VDV+S GV+L ++
Sbjct: 194 VDVWSLGVILYTLV 207
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + LS + Q ++ + + G+ +LH IIH D+KP N+
Sbjct: 109 ELM-DANLSQVI--QMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSD 162
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLA+ T ++ T Y APE + VD++S GV
Sbjct: 163 ATL-------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGV 213
Query: 634 MLLEII 639
++ E+I
Sbjct: 214 IMGEMI 219
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 25/200 (12%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N + G+ + +LEK + +RE+ ++ H N+V+L +
Sbjct: 14 TYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK 72
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVE------IALGIARGLLYLHEECETQIIH 560
+LV+E + ++ + + +E L + G+ Y H+ +++H
Sbjct: 73 KRLVLVFEHLDQD------LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620
D+KPQN+ KIADFGLA+ R T T+ Y AP+ L +
Sbjct: 124 RDLKPQNL-------LINREGELKIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGS 175
Query: 621 -PVTAKVDVYSFGVMLLEII 639
+ +D++S G + E++
Sbjct: 176 KKYSTTIDIWSVGCIFAEMV 195
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 25/200 (12%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N + G+ + +LEK + +RE+ ++ H N+V+L +
Sbjct: 14 TYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK 72
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVE------IALGIARGLLYLHEECETQIIH 560
+LV+E + ++ + + +E L + G+ Y H+ +++H
Sbjct: 73 KRLVLVFEHLDQD------LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620
D+KPQN+ KIADFGLA+ R T T+ Y AP+ L +
Sbjct: 124 RDLKPQNL-------LINREGELKIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGS 175
Query: 621 -PVTAKVDVYSFGVMLLEII 639
+ +D++S G + E++
Sbjct: 176 KKYSTTIDIWSVGCIFAEMV 195
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 540 ALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQT 599
A IA GL +L + II+ D+K NV KIADFG+ K D
Sbjct: 448 AAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHI-------KIADFGMCKENIWDGV 497
Query: 600 RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
T GT Y+APE + P VD ++FGV+L E++
Sbjct: 498 TTKXFC-GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 23/186 (12%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + LS + Q ++ + + G+ +LH IIH D+KP N+
Sbjct: 109 ELM-DANLSQVI--QMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSD 162
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLA+ T ++ T Y APE + VD++S GV
Sbjct: 163 ATL-------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGV 213
Query: 634 MLLEII 639
++ E+I
Sbjct: 214 IMGEMI 219
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ADFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------KVADFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 25/200 (12%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
+Y + +A N + G+ + +LEK + +RE+ ++ H N+V+L +
Sbjct: 14 TYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK 72
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVE------IALGIARGLLYLHEECETQIIH 560
+LV+E + ++ + + +E L + G+ Y H+ +++H
Sbjct: 73 KRLVLVFEHLDQD------LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 561 CDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620
D+KPQN+ KIADFGLA+ R T T+ Y AP+ L +
Sbjct: 124 RDLKPQNL-------LINREGELKIADFGLARAFGI-PVRKYTHEIVTLWYRAPDVLMGS 175
Query: 621 -PVTAKVDVYSFGVMLLEII 639
+ +D++S G + E++
Sbjct: 176 KKYSTTIDIWSVGCIFAEMV 195
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 35/238 (14%)
Query: 483 REVQVIGRT-HHKNLVQLLGFCIEQNHQL--LVYELMKNGTLSAFLFRQEIPTWD-KRVE 538
REVQ++ + H N+++ FC E++ Q + EL TL ++ +++ + +
Sbjct: 66 REVQLLRESDEHPNVIRY--FCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPIT 122
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLK--K 596
+ GL +LH I+H D+KP N+ I+DFGL K L +
Sbjct: 123 LLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAM--ISDFGLCKKLAVGR 177
Query: 597 DQTRTSTMIRGTMGYMAPEWL----RNAPVTAKVDVYSFGVMLLEIIFCKRH---TELHR 649
+ + GT G++APE L + P T VD++S G + +I H L R
Sbjct: 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENP-TYTVDIFSAGCVFYYVISEGSHPFGKSLQR 236
Query: 650 VDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLW--CICPQPTLRPSMKQVLQ 705
++L L C L K E + L I P RPS K VL+
Sbjct: 237 ------QANILLGACSLDC-----LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
E +V+ T H L L + + + +L V E G L L R+ + T ++
Sbjct: 60 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 118
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I L YLH +++ DIK +N+ KI DFGL K D T
Sbjct: 119 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHI-------KITDFGLCKEGISDGA-TM 167
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKR 643
GT Y+APE L + VD + GV++ E++ C R
Sbjct: 168 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGR 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 491 THHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLY 549
++H LV L ++ V E + G L + RQ ++P R A I+ L Y
Sbjct: 67 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNY 125
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
LHE II+ D+K NV K+ D+G+ K + TS GT
Sbjct: 126 LHERG---IIYRDLKLDNVLLDSEGHI-------KLTDYGMCKEGLRPGDTTSXFC-GTP 174
Query: 610 GYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
Y+APE LR VD ++ GV++ E++
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMM 204
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
RE + GR ++V + F E + QL V + NG A R++ P R A+
Sbjct: 83 REARTAGRLQEPHVVPIHDFG-EIDGQLYVDXRLINGVDLAAXLRRQGPLAPPR---AVA 138
Query: 543 IARGL-LYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRT 601
I R + L H D+KP+N+ + DFG+A ++
Sbjct: 139 IVRQIGSALDAAHAAGATHRDVKPENILVSADDFAY-------LVDFGIASATTDEKLTQ 191
Query: 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
GT+ Y APE + T + D+Y+ +L E
Sbjct: 192 LGNTVGTLYYXAPERFSESHATYRADIYALTCVLYE 227
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSA 523
VA+K++ + G K+ RE+Q++ + H N+V+L F + VY + + A
Sbjct: 48 VAIKKV--LQGKAFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPA 103
Query: 524 FLFR---------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
++R Q +P ++ + + R L Y+H I H DIKPQN+
Sbjct: 104 TVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------ 153
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGV 633
K+ DFG AK L + + S + + Y APE + A T+ +DV+S G
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 634 MLLEIIF 640
+L E++
Sbjct: 212 VLAELLL 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 491 THHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLY 549
++H LV L ++ V E + G L + RQ ++P R A I+ L Y
Sbjct: 63 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNY 121
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
LHE II+ D+K NV K+ D+G+ K + TS GT
Sbjct: 122 LHERG---IIYRDLKLDNVLLDSEGHI-------KLTDYGMCKEGLRPGDTTSXFC-GTP 170
Query: 610 GYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
Y+APE LR VD ++ GV++ E++
Sbjct: 171 NYIAPEILRGEDYGFSVDWWALGVLMFEMM 200
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 540 ALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQT 599
A IA GL +L + II+ D+K NV KIADFG+ K D
Sbjct: 127 AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHI-------KIADFGMCKENIWDGV 176
Query: 600 RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
T GT Y+APE + P VD ++FGV+L E++
Sbjct: 177 TTKXFC-GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
E +V+ T H L L + + + +L V E G L L R+ + T ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I L YLH +++ DIK +N+ KI DFGL K D T
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHI-------KITDFGLCKEGISDGA-TM 162
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKR 643
GT Y+APE L + VD + GV++ E++ C R
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGR 202
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 16/200 (8%)
Query: 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLG 501
+ V ++ +++ + G +V V + +K+ D RE+Q + H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 502 FCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHC 561
+V E + G L ++ + + + I + Y H ++H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHR 135
Query: 562 DIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ-TRTSTMIRGTMGYMAPEWLRNA 620
D+KP+NV KIADFGL+ ++ + RTS G+ Y APE +
Sbjct: 136 DLKPENV-------LLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVISGR 185
Query: 621 PVTA-KVDVYSFGVMLLEII 639
+VD++S GV+L ++
Sbjct: 186 LYAGPEVDIWSCGVILYALL 205
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 491 THHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLY 549
++H LV L ++ V E + G L + RQ ++P R A I+ L Y
Sbjct: 78 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNY 136
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
LHE II+ D+K NV K+ D+G+ K + TS GT
Sbjct: 137 LHERG---IIYRDLKLDNVLLDSEGHI-------KLTDYGMCKEGLRPGDTTSXFC-GTP 185
Query: 610 GYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
Y+APE LR VD ++ GV++ E++
Sbjct: 186 NYIAPEILRGEDYGFSVDWWALGVLMFEMM 215
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 23/185 (12%)
Query: 463 VEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQ------NHQLLVYE 514
+ VAVK+L + + K RE+ ++ +HKN++ LL Q LV E
Sbjct: 50 INVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 515 LMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
LM + ++ + + G+ +LH IIH D+KP N+
Sbjct: 110 LMDANLCQVIHMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDC 163
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
KI DFGLA+ + T ++ T Y APE + A VD++S G +
Sbjct: 164 TL-------KILDFGLARTACTNFMMTPYVV--TRYYRAPEVILGMGYAANVDIWSVGCI 214
Query: 635 LLEII 639
+ E++
Sbjct: 215 MGELV 219
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 512 VYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXX 571
+YEL+K F +P K A I + L LH+ +IIHCD+KP+N+
Sbjct: 185 LYELIKKNKFQGF----SLPLVRK---FAHSILQCLDALHK---NRIIHCDLKPENI--- 231
Query: 572 XXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ DFG + + R T I+ Y APE + A +D++S
Sbjct: 232 --LLKQQGRSGIKVIDFGSSCY---EHQRVYTXIQSRF-YRAPEVILGARYGMPIDMWSL 285
Query: 632 GVMLLEII 639
G +L E++
Sbjct: 286 GCILAELL 293
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
E +V+ T H L L + + + +L V E G L L R+ + T ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I L YLH +++ DIK +N+ KI DFGL K D T
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHI-------KITDFGLCKEGISDGA-TM 162
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKR 643
GT Y+APE L + VD + GV++ E++ C R
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGR 202
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 512 VYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXX 571
+YEL+K F +P K A I + L LH+ +IIHCD+KP+N+
Sbjct: 185 LYELIKKNKFQGF----SLPLVRK---FAHSILQCLDALHK---NRIIHCDLKPENI--- 231
Query: 572 XXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ DFG + + R T I+ Y APE + A +D++S
Sbjct: 232 --LLKQQGRSGIKVIDFGSSCY---EHQRVYTXIQSRF-YRAPEVILGARYGMPIDMWSL 285
Query: 632 GVMLLEII 639
G +L E++
Sbjct: 286 GCILAELL 293
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 14/161 (8%)
Query: 484 EVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542
E +V+ T H L L + + + +L V E G L L R+ + T ++
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTS 602
I L YLH +++ DIK +N+ KI DFGL K D T
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHI-------KITDFGLCKEGISDGA-TM 162
Query: 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKR 643
GT Y+APE L + VD + GV++ E++ C R
Sbjct: 163 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGR 202
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 41/222 (18%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ ++ +A N D + A+K++ + T + + L EV ++ +H+ +V+ +E+
Sbjct: 18 AFGQVVKARNALDSRYY--AIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLER 74
Query: 507 NH-------------QLLVYELMKNGTLSAFLFRQEI-PTWDKRVEIALGIARGLLYLHE 552
+ + E +N TL + + + D+ + I L Y+H
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS 134
Query: 553 ECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-------LLKKDQ------T 599
+ IIH D+KP N+ KI DFGLAK +LK D +
Sbjct: 135 QG---IIHRDLKPMNIFIDESRNV-------KIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 600 RTSTMIRGTMGYMAPEWLR-NAPVTAKVDVYSFGVMLLEIIF 640
T GT Y+A E L K+D+YS G++ E+I+
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 538 EIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
+I+ + GL Y+H C IIH DIKP+NV KIAD G A D
Sbjct: 135 QISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQI-KIADLGNACWY--D 189
Query: 598 QTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
+ T+++ T Y +PE L AP D++S ++ E+I
Sbjct: 190 EHYTNSI--QTREYRSPEVLLGAPWGCGADIWSTACLIFELI 229
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 538 EIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
+I+ + GL Y+H C IIH DIKP+NV KIAD G A D
Sbjct: 135 QISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQI-KIADLGNACWY--D 189
Query: 598 QTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639
+ T+++ T Y +PE L AP D++S ++ E+I
Sbjct: 190 EHYTNSI--QTREYRSPEVLLGAPWGCGADIWSTACLIFELI 229
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 540 ALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQT 599
A I GL +LH + I++ D+K N+ KIADFG+ K
Sbjct: 125 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHI-------KIADFGMCKENMLGDA 174
Query: 600 RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGM 659
+T+ GT Y+APE L VD +SFGV+L E++ + + H DE L + +
Sbjct: 175 KTNEFC-GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEEELFHSI 231
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 540 ALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQT 599
A I GL +LH + I++ D+K N+ KIADFG+ K
Sbjct: 124 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHI-------KIADFGMCKENMLGDA 173
Query: 600 RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGM 659
+T+ GT Y+APE L VD +SFGV+L E++ + + H DE L + +
Sbjct: 174 KTNXFC-GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEEELFHSI 230
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 96 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 151
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 152 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 201
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 202 GSAKQLVRGEPNVSXIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 252
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 23/186 (12%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 112 DANLXQVIQMELD---HERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTL 165
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 166 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 637 EIIFCK 642
E++ K
Sbjct: 217 EMVRHK 222
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 56 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 105
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 106 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 162
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT T+ GT Y+APE + + VD ++ G
Sbjct: 163 QGYI-------QVTDFGFAKRVK---GRTWTLC-GTPEYLAPEIILSKGYNKAVDWWALG 211
Query: 633 VMLLEI 638
V++ E+
Sbjct: 212 VLIYEM 217
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 98 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 153
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 154 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 203
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 204 GSAKQLVRGEPNVSYIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 254
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 74 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 129
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 130 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 179
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 180 GSAKQLVRGEPNVSXIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 230
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 90 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 145
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 146 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 195
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 196 GSAKQLVRGEPNVSYIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 246
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 96 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 151
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 152 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 201
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 202 GSAKQLVRGEPNVSYIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 252
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 100 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 155
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 156 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 205
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 206 GSAKQLVRGEPNVSYIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 256
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 71 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 120
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 177
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT T+ GT Y+APE + + VD ++ G
Sbjct: 178 QGYI-------QVTDFGFAKRVK---GRTWTLC-GTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 633 VMLLEI 638
V++ E+
Sbjct: 227 VLIYEM 232
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-------------- 510
VA+K++ + G K+ RE+Q++ + H N+V+L F +
Sbjct: 48 VAIKKV--LQGKAFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
VY + ++ + + +Q +P ++ + + R L Y+H I H DIKPQN+
Sbjct: 104 TVYRVARHYSRA----KQTLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL-- 153
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVY 629
K+ DFG AK L + + S + + Y APE + A T+ +DV+
Sbjct: 154 ----LLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPELIFGATDYTSSIDVW 207
Query: 630 SFGVMLLEIIF 640
S G +L E++
Sbjct: 208 SAGCVLAELLL 218
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 70 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 125
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 126 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 175
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 176 GSAKQLVRGEPNVSXIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 226
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 74 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 129
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 130 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 179
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 180 GSAKQLVRGEPNVSXIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 230
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL-LVYELMKNGTLSAFLFR---------QEIPT 532
RE+Q++ + H N+V+L F + +VY + + ++R Q +P
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 533 WDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK 592
++ + + R L Y+H I H DIKPQN+ K+ DFG AK
Sbjct: 122 IYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDFGSAK 171
Query: 593 LLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 172 QLVRGEPNVSXIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-------------- 510
VA+K++ + G K+ RE+Q++ + H N+V+L F +
Sbjct: 48 VAIKKV--LQGKAFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 103
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
VY + ++ + + +Q +P ++ + + R L Y+H I H DIKPQN+
Sbjct: 104 TVYRVARHYSRA----KQTLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL-- 153
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVY 629
K+ DFG AK L + + S + + Y APE + A T+ +DV+
Sbjct: 154 ----LLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPELIFGATDYTSSIDVW 207
Query: 630 SFGVMLLEIIF 640
S G +L E++
Sbjct: 208 SAGCVLAELLL 218
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 81 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 136
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 137 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 186
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 187 GSAKQLVRGEPNVSXIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 237
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 63 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 118
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 119 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 168
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 169 GSAKQLVRGEPNVSXIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 219
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 141 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 196
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 197 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 246
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 247 GSAKQLVRGEPNVSYIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 297
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 26/195 (13%)
Query: 457 VFDGQEVEVAVKQLEKVTGDGEKSFL-REVQVIGRTHHKNLVQLLGFCIEQNHQL----- 510
VF + VE ++KV D K F RE+Q++ H N+V L F +
Sbjct: 56 VFQAKLVESDEVAIKKVLQD--KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113
Query: 511 -LVYELMKNGTLSA----FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKP 565
LV E + A +Q +P ++ + + R L Y+H I H DIKP
Sbjct: 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM-YQLLRSLAYIHS---IGICHRDIKP 169
Query: 566 QNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTA 624
QN+ K+ DFG AK+L + S + + Y APE + A T
Sbjct: 170 QNL------LLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYRAPELIFGATNYTT 221
Query: 625 KVDVYSFGVMLLEII 639
+D++S G ++ E++
Sbjct: 222 NIDIWSTGCVMAELM 236
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 66 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 121
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 122 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 171
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 172 GSAKQLVRGEPNVSXIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 222
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 117
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 118 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 167
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 168 GSAKQLVRGEPNVSXIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 67 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 122
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 123 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 172
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 173 GSAKQLVRGEPNVSYIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 223
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 77/178 (43%), Gaps = 18/178 (10%)
Query: 492 HHKNLVQLLGFCIEQ--NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLY 549
+H L QL FC Q + V E + G L + + + A I L++
Sbjct: 82 NHPFLTQL--FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
LH++ II+ D+K NV K+ADFG+ K + T+T GT
Sbjct: 140 LHDK---GIIYRDLKLDNVLLDHEGHC-------KLADFGMCKEGICNGVTTATFC-GTP 188
Query: 610 GYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLY 667
Y+APE L+ VD ++ GV+L E++ C H +E L IL D V+Y
Sbjct: 189 DYIAPEILQEMLYGPAVDWWAMGVLLYEML-CG-HAPFEAENEDDLFEA-ILNDEVVY 243
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 117
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 118 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 167
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 168 GSAKQLVRGEPNVSXIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 23/185 (12%)
Query: 463 VEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQ------NHQLLVYE 514
+ VAVK+L + + K RE+ ++ +HKN++ LL Q LV E
Sbjct: 48 INVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 107
Query: 515 LMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
LM + ++ + + G+ +LH IIH D+KP N+
Sbjct: 108 LMDANLCQVIHMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDC 161
Query: 575 XXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634
KI DFGLA+ + T ++ T Y APE + VD++S G +
Sbjct: 162 TL-------KILDFGLARTASTNFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCI 212
Query: 635 LLEII 639
+ E++
Sbjct: 213 MGELV 217
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 81/194 (41%), Gaps = 13/194 (6%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +++ A ++ G+EV + + ++ + REV+++ +H N+V+L +
Sbjct: 27 NFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE 86
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
L+ E G + +L + I + Y H++ +I+H D+K +
Sbjct: 87 KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAE 143
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA-K 625
N+ KIADFG + + G Y APE + +
Sbjct: 144 NL-------LLDADMNIKIADFGFSNEFTVGGKLDAFC--GAPPYAAPELFQGKKYDGPE 194
Query: 626 VDVYSFGVMLLEII 639
VDV+S GV+L ++
Sbjct: 195 VDVWSLGVILYTLV 208
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 75 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 130
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 131 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 180
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 181 GSAKQLVRGEPNVSYIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 231
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 83/194 (42%), Gaps = 13/194 (6%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ 506
++ +++ A ++ G+EV + + ++ + REV+++ +H N+V+L +
Sbjct: 24 NFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE 83
Query: 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQ 566
L+ E G + +L + I + Y H++ +I+H D+K +
Sbjct: 84 KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAE 140
Query: 567 NVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA-K 625
N+ KIADFG + + T G+ Y APE + +
Sbjct: 141 NL-------LLDADMNIKIADFGFSNEFTVG-GKLDTFC-GSPPYAAPELFQGKKYDGPE 191
Query: 626 VDVYSFGVMLLEII 639
VDV+S GV+L ++
Sbjct: 192 VDVWSLGVILYTLV 205
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 16/179 (8%)
Query: 465 VAVKQLEKVTGDG--EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
VA+K+ + D +K LRE++++ + H NLV LL + LV+E + L
Sbjct: 31 VAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLH 90
Query: 523 AF-LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXX 581
+++ +P + I + + + H+ IH D+KP+N+
Sbjct: 91 ELDRYQRGVPEHLVK-SITWQTLQAVNFCHKH---NCIHRDVKPENI-------LITKHS 139
Query: 582 XXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL-RNAPVTAKVDVYSFGVMLLEII 639
K+ DFG A+LL + T Y +PE L + VDV++ G + E++
Sbjct: 140 VIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL 197
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 483 REVQVIGRTHHKNLVQLLGFCIEQNHQL--------------LVYELMKNGTLSAFLFRQ 528
RE+Q++ + H N+V+L F + VY + ++ + + +Q
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA----KQ 117
Query: 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADF 588
+P ++ + + R L Y+H I H DIKPQN+ K+ DF
Sbjct: 118 TLPVIYVKLYM-YQLFRSLAYIHS---FGICHRDIKPQNL------LLDPDTAVLKLCDF 167
Query: 589 GLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIF 640
G AK L + + S + + Y APE + A T+ +DV+S G +L E++
Sbjct: 168 GSAKQLVRGEPNVSYIC--SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + LS + Q ++ + + G+ +LH IIH D+KP N+
Sbjct: 109 ELM-DANLSQVI--QMELDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSD 162
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLA+ T ++ T Y APE + VD++S G
Sbjct: 163 ATL-------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 634 MLLEII 639
++ E+I
Sbjct: 214 IMGEMI 219
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 13/134 (9%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L++ E M+ G L + + + + +R EI I + +LH I H D+KP+N
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPEN 139
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK ++ +T T Y+APE L D
Sbjct: 140 LLYTSKEKDAVL----KLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCD 192
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 193 MWSLGVIMY-ILLC 205
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------KVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 71 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 120
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQ 177
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 178 QGYI-------KVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 633 VMLLEI 638
V++ E+
Sbjct: 227 VLIYEM 232
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 13/134 (9%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L++ E M+ G L + + + + +R EI I + +LH I H D+KP+N
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPEN 158
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK ++ +T T Y+APE L D
Sbjct: 159 LLYTSKEKDAVL----KLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCD 211
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 212 MWSLGVIMY-ILLC 224
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 23/186 (12%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 105 DANLXQVIQMELD---HERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTL 158
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 159 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 209
Query: 637 EIIFCK 642
E++ K
Sbjct: 210 EMVRHK 215
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEK-----SFLREVQVIGRTHHKNLVQLLG 501
++ E+ +A + GQ+V L+KV + EK + LRE++++ H+N+V L+
Sbjct: 30 TFGEVFKARHRKTGQKVA-----LKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 502 FCIEQNHQ--------LLVYELMKN---GTLSAFLFRQEIPTWDKRVEIALGIARGLLYL 550
C + LV++ ++ G LS L + + + +++ L GL Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 141
Query: 551 HEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK---LLKKDQTRTSTMIRG 607
H +I+H D+K NV K+ADFGLA+ L K Q
Sbjct: 142 H---RNKILHRDMKAANV-------LITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 608 TMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEI 638
T+ Y PE L +D++ G ++ E+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + LS + Q ++ + + G+ +LH IIH D+KP N+
Sbjct: 109 ELM-DANLSQVI--QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 162
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLA+ T ++ T Y APE + VD++S G
Sbjct: 163 ATL-------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 634 MLLEII 639
++ E+I
Sbjct: 214 IMGEMI 219
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 84/199 (42%), Gaps = 14/199 (7%)
Query: 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLG 501
+ V ++ +++ + G +V V + +K+ D RE+Q + H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 502 FCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHC 561
+V E + G L ++ + + + I + Y H ++H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHR 135
Query: 562 DIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP 621
D+KP+NV KIADFGL+ ++ + + G+ Y APE +
Sbjct: 136 DLKPENV-------LLDAHMNAKIADFGLSNMMSDGEFLRDSC--GSPNYAAPEVISGRL 186
Query: 622 VTA-KVDVYSFGVMLLEII 639
+VD++S GV+L ++
Sbjct: 187 YAGPEVDIWSCGVILYALL 205
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E ++ + LV+L F + N L +V
Sbjct: 71 AMKILDKQKV-VKLKQIEHT--------LNEKRIQQAVNFPFLVKL-EFSFKDNSNLYMV 120
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 LEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 177
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ADFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 178 QGYI-------KVADFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 633 VMLLEI 638
V++ E+
Sbjct: 227 VLIYEM 232
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 23/186 (12%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 112 DANLXQVIQMELD---HERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTL 165
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 166 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 637 EIIFCK 642
E++ K
Sbjct: 217 EMVRHK 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 23/186 (12%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 112 DANLXQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTL 165
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 166 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 637 EIIFCK 642
E++ K
Sbjct: 217 EMVRHK 222
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +K++E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKEIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ DFGLAK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------KVTDFGLAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEK-----SFLREVQVIGRTHHKNLVQLLG 501
++ E+ +A + GQ+V L+KV + EK + LRE++++ H+N+V L+
Sbjct: 29 TFGEVFKARHRKTGQKV-----ALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 502 FCIEQNHQ--------LLVYELMKN---GTLSAFLFRQEIPTWDKRVEIALGIARGLLYL 550
C + LV++ ++ G LS L + + + +++ L GL Y+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 140
Query: 551 HEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK---LLKKDQTRTSTMIRG 607
H +I+H D+K NV K+ADFGLA+ L K Q
Sbjct: 141 H---RNKILHRDMKAANV-------LITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 608 TMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEI 638
T+ Y PE L +D++ G ++ E+
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEK-----SFLREVQVIGRTHHKNLVQLLG 501
++ E+ +A + GQ+V L+KV + EK + LRE++++ H+N+V L+
Sbjct: 30 TFGEVFKARHRKTGQKV-----ALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 502 FCIEQNHQ--------LLVYELMKN---GTLSAFLFRQEIPTWDKRVEIALGIARGLLYL 550
C + LV++ ++ G LS L + + + +++ L GL Y+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 141
Query: 551 HEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK---LLKKDQTRTSTMIRG 607
H +I+H D+K NV K+ADFGLA+ L K Q
Sbjct: 142 H---RNKILHRDMKAANV-------LITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 608 TMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEI 638
T+ Y PE L +D++ G ++ E+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 512 VYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXX 571
+YEL+K F +P K A I + L LH+ +IIHCD+KP+N+
Sbjct: 185 LYELIKKNKFQGF----SLPLVRK---FAHSILQCLDALHK---NRIIHCDLKPENI--- 231
Query: 572 XXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631
K+ DFG + + R I+ Y APE + A +D++S
Sbjct: 232 --LLKQQGRSGIKVIDFGSSCY---EHQRVYXXIQSRF-YRAPEVILGARYGMPIDMWSL 285
Query: 632 GVMLLEII 639
G +L E++
Sbjct: 286 GCILAELL 293
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 150 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTL 203
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 204 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 254
Query: 637 EIIFCKRHTEL 647
E++ RH L
Sbjct: 255 EMV---RHKIL 262
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 38/212 (17%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEK-----SFLREVQVIGRTHHKNLVQLLG 501
++ E+ +A + GQ+V L+KV + EK + LRE++++ H+N+V L+
Sbjct: 30 TFGEVFKARHRKTGQKV-----ALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 502 FCIE--------QNHQLLVYELMKN---GTLSAFLFRQEIPTWDKRVEIALGIARGLLYL 550
C + LV++ ++ G LS L + + + +++ L GL Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 141
Query: 551 HEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK---LLKKDQTRTSTMIRG 607
H +I+H D+K NV K+ADFGLA+ L K Q
Sbjct: 142 H---RNKILHRDMKAANV-------LITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 608 TMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEI 638
T+ Y PE L +D++ G ++ E+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 478 EKSFLREV---QVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS-AFLFRQEIPTW 533
E++ LREV V+G+ H ++V+ E +H L+ E G+L+ A I ++
Sbjct: 54 EQNALREVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 111
Query: 534 DKRVEIA---LGIARGLLYLHEECETQIIHCDIKPQNV 568
K E+ L + RGL Y+H ++H DIKP N+
Sbjct: 112 FKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNI 146
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLA-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 478 EKSFLREV---QVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS-AFLFRQEIPTW 533
E++ LREV V+G+ H ++V+ E +H L+ E G+L+ A I ++
Sbjct: 52 EQNALREVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 109
Query: 534 DKRVEIA---LGIARGLLYLHEECETQIIHCDIKPQNV 568
K E+ L + RGL Y+H ++H DIKP N+
Sbjct: 110 FKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNI 144
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLX-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 57 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 106
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 107 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDE 163
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 164 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 212
Query: 633 VMLLEI 638
V++ E+
Sbjct: 213 VLIYEM 218
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 478 EKSFLREV---QVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS-AFLFRQEIPTW 533
E++ LREV V+G+ H ++V+ E +H L+ E G+L+ A I ++
Sbjct: 50 EQNALREVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 107
Query: 534 DKRVEIA---LGIARGLLYLHEECETQIIHCDIKPQNV 568
K E+ L + RGL Y+H ++H DIKP N+
Sbjct: 108 FKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNI 142
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 547 LLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIR 606
L +LH + ++H D+KP N+ K+ DFGL L++ +
Sbjct: 170 LAHLHSQG---LVHLDVKPANI-------FLGPRGRCKLGDFGL--LVELGTAGAGEVQE 217
Query: 607 GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638
G YMAPE L+ + TA DV+S G+ +LE+
Sbjct: 218 GDPRYMAPELLQGSYGTA-ADVFSLGLTILEV 248
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 478 EKSFLREV---QVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS-AFLFRQEIPTW 533
E++ LREV V+G+ H ++V+ E +H L+ E G+L+ A I ++
Sbjct: 52 EQNALREVYAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 109
Query: 534 DKRVEIA---LGIARGLLYLHEECETQIIHCDIKPQNV 568
K E+ L + RGL Y+H ++H DIKP N+
Sbjct: 110 FKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNI 144
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 23/186 (12%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 112 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTL 165
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 166 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 637 EIIFCK 642
E++ K
Sbjct: 217 EMVRHK 222
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + LS + Q ++ + + G+ +LH IIH D+KP N+
Sbjct: 109 ELM-DANLSQVI--QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 162
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLA+ T ++ T Y APE + VD++S G
Sbjct: 163 ATL-------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 634 MLLEII 639
++ E+I
Sbjct: 214 IMGEMI 219
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 63 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 112
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 113 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 169
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 170 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 218
Query: 633 VMLLEI 638
V++ E+
Sbjct: 219 VLIYEM 224
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 71 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 120
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 177
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 178 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 633 VMLLEI 638
V++ E+
Sbjct: 227 VLIYEM 232
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E G + + L R A I YLH +I+ D+KP+N+
Sbjct: 120 MEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------KVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 32/179 (17%)
Query: 482 LREVQVIGRTHHKNLVQLLGFCIEQ-------NHQLLVYELMKNGTLSAFLFRQEIPTWD 534
LRE++++ H+N++ + F I++ N ++ ELM+ + ++ + D
Sbjct: 57 LREIKILKHFKHENIITI--FNIQRPDSFENFNEVYIIQELMQTDLHR--VISTQMLSDD 112
Query: 535 KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLL 594
R + LH + +IH D+KP N+ K+ DFGLA+++
Sbjct: 113 HIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDL-------KVCDFGLARII 162
Query: 595 KK---DQTRTSTMIRGTMGYMAPEWLR-------NAPVTAKVDVYSFGVMLLEIIFCKR 643
+ D + + G Y+A W R +A + +DV+S G +L E +F +R
Sbjct: 163 DESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE-LFLRR 220
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIIISKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E EK L+ V + L F + N L +V
Sbjct: 71 AMKILDKQKV-VKLKQIEHTLN--EKRILQAVNF-------PFLTKLEFSFKDNSNLYMV 120
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQ 177
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 178 QGYI-------KVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 633 VMLLEI 638
V++ E+
Sbjct: 227 VLIYEM 232
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + LS + Q ++ + + G+ +LH IIH D+KP N+
Sbjct: 109 ELM-DANLSQVI--QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 162
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLA+ T ++ T Y APE + VD++S G
Sbjct: 163 CTL-------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 634 MLLEII 639
++ E+I
Sbjct: 214 IMGEMI 219
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 91 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 140
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 141 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 197
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 198 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 633 VMLLEI 638
V++ E+
Sbjct: 247 VLIYEM 252
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 71 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 120
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 177
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 178 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 633 VMLLEI 638
V++ E+
Sbjct: 227 VLIYEM 232
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 150 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTL 203
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 204 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 254
Query: 637 EIIFCKRHTEL 647
E++ RH L
Sbjct: 255 EMV---RHKIL 262
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 71 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 120
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 177
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 178 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 633 VMLLEI 638
V++ E+
Sbjct: 227 VLIYEM 232
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 71 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 120
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 177
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 178 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 633 VMLLEI 638
V++ E+
Sbjct: 227 VLIYEM 232
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 467 VKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526
+ + E + F E ++ + +VQL + + +V E M G L +
Sbjct: 102 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS 161
Query: 527 RQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKI 585
++P W + A +L L IH D+KP N+ K+
Sbjct: 162 NYDVPEKWAR-----FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL-------KL 209
Query: 586 ADFGL-AKLLKKDQTRTSTMIRGTMGYMAPEWLR----NAPVTAKVDVYSFGVMLLEII 639
ADFG K+ K+ R T + GT Y++PE L+ + + D +S GV L E++
Sbjct: 210 ADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E EK L+ V + L F + N L +V
Sbjct: 71 AMKILDKQKV-VKLKQIEHTLN--EKRILQAVNF-------PFLTKLEFSFKDNSNLYMV 120
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQ 177
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 178 QGYI-------KVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 633 VMLLEI 638
V++ E+
Sbjct: 227 VLIYEM 232
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 24/187 (12%)
Query: 465 VAVKQLEKVTGDGE---KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
VA+K++ ++ D E S LRE+ ++ HKN+V+L LV+E
Sbjct: 30 VALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLK 88
Query: 522 SAFLFRQEIPTWDKRVEIA----LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXX 577
F + D EI + +GL + H ++H D+KPQN+
Sbjct: 89 KYF----DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNL-------LI 134
Query: 578 XXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVYSFGVMLL 636
K+ADFGLA+ R + T+ Y P+ L A + + +D++S G +
Sbjct: 135 NRNGELKLADFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 637 EIIFCKR 643
E+ R
Sbjct: 194 ELANAAR 200
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 25/205 (12%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCI 504
+Y + A GQ+V A+K++ K LRE++++ H N++ +
Sbjct: 67 AYGVVSSARRRLTGQQV--AIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILR 124
Query: 505 ------EQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQI 558
E +V +LM++ L + + T + + RGL Y+H Q+
Sbjct: 125 PTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS---AQV 180
Query: 559 IHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLL---KKDQTRTSTMIRGTMGYMAPE 615
IH D+KP N+ KI DFG+A+ L + T T Y APE
Sbjct: 181 IHRDLKPSNL-------LVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 616 WLRN-APVTAKVDVYSFGVMLLEII 639
+ + T +D++S G + E++
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEML 258
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 467 VKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526
+ + E + F E ++ + +VQL + + +V E M G L +
Sbjct: 107 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS 166
Query: 527 RQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKI 585
++P W + A +L L IH D+KP N+ K+
Sbjct: 167 NYDVPEKWAR-----FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL-------KL 214
Query: 586 ADFGL-AKLLKKDQTRTSTMIRGTMGYMAPEWLR----NAPVTAKVDVYSFGVMLLEII 639
ADFG K+ K+ R T + GT Y++PE L+ + + D +S GV L E++
Sbjct: 215 ADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 465 VAVKQLEKVTGDGE-KSFLREVQVIGRTHH-KNLVQLLGFCIEQNHQLLVYELMKNGTLS 522
+AVK++ + E K L ++ V+ R+ +VQ G + + ELM
Sbjct: 50 MAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDK 109
Query: 523 AFLF----RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXX 578
+ + ++ + +I L + L +L E +IIH DIKP N+
Sbjct: 110 FYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNI-------LLD 160
Query: 579 XXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP----VTAKVDVYSFGVM 634
K+ DFG++ L +T G YMAPE + + + DV+S G+
Sbjct: 161 RSGNIKLCDFGISGQLVDSIAKTRDA--GCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218
Query: 635 LLEI 638
L E+
Sbjct: 219 LYEL 222
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 71 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 120
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 177
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 178 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 633 VMLLEI 638
V++ E+
Sbjct: 227 VLIYEM 232
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 13/176 (7%)
Query: 465 VAVKQLEKVTGDGEK-SFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523
VA+K++ +G + +REV ++ H N+V L + LV+E +
Sbjct: 30 VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQY 89
Query: 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXX 583
I + RGL Y H + +++H D+KPQN+
Sbjct: 90 LDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNL-------LINERGEL 139
Query: 584 KIADFGLAKLLKKDQTRTSTMIRGTMGYMAPE-WLRNAPVTAKVDVYSFGVMLLEI 638
K+ADFGLA+ K T+T T+ Y P+ L + + ++D++ G + E+
Sbjct: 140 KLADFGLAR-AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 194
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK-------LLK 595
I L Y+H + IIH ++KP N+ KI DFGLAK +LK
Sbjct: 125 ILEALSYIHSQG---IIHRNLKPXNIFIDESRNV-------KIGDFGLAKNVHRSLDILK 174
Query: 596 KDQ------TRTSTMIRGTMGYMAPEWLR-NAPVTAKVDVYSFGVMLLEIIF 640
D + T GT Y+A E L K+D YS G++ E I+
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY 226
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 21/176 (11%)
Query: 477 GEKSFLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELMKNGTLSAFL--FRQEIPTW 533
GE S RE + + + + L F + +N+ LV E G L L F + IP
Sbjct: 103 GEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE 162
Query: 534 DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKL 593
R +A I + +H +H DIKP N+ ++ADFG
Sbjct: 163 MARFYLA-EIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHI-------RLADFGSCLK 211
Query: 594 LKKDQTRTSTMIRGTMGYMAPEWLRNAPVTA-------KVDVYSFGVMLLEIIFCK 642
L+ D T S + GT Y++PE L+ + D ++ GV E+ + +
Sbjct: 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + ++ + + G+ +LH IIH D+KP N+
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 162
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLA+ T ++ T Y APE + VD++S G
Sbjct: 163 CTL-------KILDFGLARTAGTSFMMTPEVV--TRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 634 MLLEII 639
++ E+I
Sbjct: 214 IMGEMI 219
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 18/143 (12%)
Query: 505 EQNHQLLVYELMKNGTLSAFL--FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
++NH LV + G L L F ++P R I +L + + +H D
Sbjct: 161 DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR----FYIGEMVLAIDSIHQLHYVHRD 216
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRN--- 619
IKP NV ++ADFG + D T S++ GT Y++PE L+
Sbjct: 217 IKPDNVLLDVNGHI-------RLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 620 --APVTAKVDVYSFGVMLLEIIF 640
+ D +S GV + E+++
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLY 292
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 19/179 (10%)
Query: 467 VKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526
+ + E + F E ++ + +VQL + + +V E M G L +
Sbjct: 107 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS 166
Query: 527 RQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKI 585
++P W + A +L L IH D+KP N+ K+
Sbjct: 167 NYDVPEKWAR-----FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL-------KL 214
Query: 586 ADFGL-AKLLKKDQTRTSTMIRGTMGYMAPEWLR----NAPVTAKVDVYSFGVMLLEII 639
ADFG K+ K+ R T + GT Y++PE L+ + + D +S GV L E++
Sbjct: 215 ADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 18/143 (12%)
Query: 505 EQNHQLLVYELMKNGTLSAFL--FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
++NH LV + G L L F ++P R I +L + + +H D
Sbjct: 145 DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR----FYIGEMVLAIDSIHQLHYVHRD 200
Query: 563 IKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRN--- 619
IKP NV ++ADFG + D T S++ GT Y++PE L+
Sbjct: 201 IKPDNVLLDVNGHI-------RLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 620 --APVTAKVDVYSFGVMLLEIIF 640
+ D +S GV + E+++
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLY 276
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 21/194 (10%)
Query: 447 SYQELREATNVFDGQEVEVAV--KQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCI 504
S+ +++ AT+ Q+V + +QL K D RE+ + H ++++L
Sbjct: 21 SFGKVKLATHYKTQQKVALKFISRQLLK-KSDMHMRVEREISYLKLLRHPHIIKLYDVIT 79
Query: 505 EQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
++V E G L ++ ++ T D+ I + Y H +I+H D+K
Sbjct: 80 TPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLK 135
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQ-TRTSTMIRGTMGYMAPEWLRNAPVT 623
P+N+ KIADFGL+ ++ +TS G+ Y APE + N +
Sbjct: 136 PENL-------LLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVI-NGKLY 184
Query: 624 A--KVDVYSFGVML 635
A +VDV+S G++L
Sbjct: 185 AGPEVDVWSCGIVL 198
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 15/109 (13%)
Query: 538 EIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKD 597
+IA+ I + L +LH + +IH D+KP NV K DFG++ L D
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNV-------LINALGQVKXCDFGISGYLVDD 190
Query: 598 QTRTSTMIRGTMGYMAPEW----LRNAPVTAKVDVYSFGVMLLEIIFCK 642
+ + G Y APE L + K D++S G+ +E+ +
Sbjct: 191 VAK--DIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILR 237
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 91 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 140
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 141 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 197
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K + + GT Y+APE + + VD ++ G
Sbjct: 198 QGYI-------QVTDFGFAKRVKG----ATWTLCGTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 633 VMLLEI 638
V++ E+
Sbjct: 247 VLIYEM 252
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 113 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTL 166
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 167 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 217
Query: 637 EIIFCKRHTEL 647
E++ RH L
Sbjct: 218 EMV---RHKIL 225
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 112 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTL 165
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 166 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 637 EIIFCKRHTEL 647
E++ RH L
Sbjct: 217 EMV---RHKIL 224
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 91 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 140
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R A I YLH +I+ D+KP+N+
Sbjct: 141 MEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 197
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 198 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 633 VMLLEI 638
V++ E+
Sbjct: 247 VLIYEM 252
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 113 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTL 166
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 167 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 217
Query: 637 EIIFCKRHTEL 647
E++ RH L
Sbjct: 218 EMV---RHKIL 225
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 63 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 112
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R A I YLH +I+ D+KP+N+
Sbjct: 113 MEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 169
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 170 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 218
Query: 633 VMLLEI 638
V++ E+
Sbjct: 219 VLIYEM 224
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 106 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTL 159
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 160 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 210
Query: 637 EIIFCKRHTEL 647
E++ RH L
Sbjct: 211 EMV---RHKIL 218
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +K++E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKEIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFGLAK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGLAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 110
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 111 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTL 164
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 165 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 215
Query: 637 EIIFCKRHTEL 647
E++ RH L
Sbjct: 216 EMV---RHKIL 223
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 65 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 114
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R A I YLH +I+ D+KP+N+
Sbjct: 115 MEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 171
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 172 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 220
Query: 633 VMLLEI 638
V++ E+
Sbjct: 221 VLIYEM 226
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 112 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTL 165
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 166 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 637 EIIFCKRHTEL 647
E++ RH L
Sbjct: 217 EMV---RHKIL 224
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 106 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTL 159
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 160 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 210
Query: 637 EIIFCKRHTEL 647
E++ RH L
Sbjct: 211 EMV---RHKIL 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELM 516
VA+K+L + + K RE+ ++ +HKN++ LL Q LV ELM
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXX 576
+ ++ + + G+ +LH IIH D+KP N+
Sbjct: 105 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTL 158
Query: 577 XXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636
KI DFGLA+ T ++ T Y APE + VD++S G ++
Sbjct: 159 -------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMG 209
Query: 637 EIIFCKRHTEL 647
E++ RH L
Sbjct: 210 EMV---RHKIL 217
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 555 ETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAP 614
E IIHCD+KP+N+ KI DFG + L + R I+ Y +P
Sbjct: 177 ELSIIHCDLKPENI-----LLCNPKRSAIKIVDFGSSCQLGQ---RIYQXIQSRF-YRSP 227
Query: 615 EWLRNAPVTAKVDVYSFGVMLLEI 638
E L P +D++S G +L+E+
Sbjct: 228 EVLLGMPYDLAIDMWSLGCILVEM 251
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 555 ETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAP 614
E IIHCD+KP+N+ KI DFG + L + R I+ Y +P
Sbjct: 158 ELSIIHCDLKPENI-----LLCNPKRSAIKIVDFGSSCQLGQ---RIYQXIQSRF-YRSP 208
Query: 615 EWLRNAPVTAKVDVYSFGVMLLEI 638
E L P +D++S G +L+E+
Sbjct: 209 EVLLGMPYDLAIDMWSLGCILVEM 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E EK L+ V + L F + N L +V
Sbjct: 71 AMKILDKQKV-VKLKQIEHTLN--EKRILQAVNF-------PFLTKLEFSFKDNSNLYMV 120
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E G + + L R A I YLH +I+ D+KP+N+
Sbjct: 121 MEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQ 177
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
K+ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 178 QGYI-------KVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 633 VMLLEI 638
V++ E+
Sbjct: 227 VLIYEM 232
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 555 ETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAP 614
E IIHCD+KP+N+ KI DFG + L + R I+ Y +P
Sbjct: 177 ELSIIHCDLKPENI-----LLCNPKRXAIKIVDFGSSCQLGQ---RIYQXIQSRF-YRSP 227
Query: 615 EWLRNAPVTAKVDVYSFGVMLLEI 638
E L P +D++S G +L+E+
Sbjct: 228 EVLLGMPYDLAIDMWSLGCILVEM 251
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 482 LREVQVIGRTHHKNLVQLLGFCIEQ-------NHQLLVYELMKNGTLSAFLFRQEIPTWD 534
LRE++++ H+N++ + F I++ N ++ ELM+ + ++ + D
Sbjct: 57 LREIKILKHFKHENIITI--FNIQRPDSFENFNEVYIIQELMQTDLHR--VISTQMLSDD 112
Query: 535 KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLL 594
R + LH + +IH D+KP N+ K+ DFGLA+++
Sbjct: 113 HIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDL-------KVCDFGLARII 162
Query: 595 KK---DQTRTSTMIRGTMGYMAPEWLR-------NAPVTAKVDVYSFGVMLLEIIFCKR 643
+ D + + G + ++A W R +A + +DV+S G +L E +F +R
Sbjct: 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE-LFLRR 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 71 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 120
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R A I YLH +I+ D+KP+N+
Sbjct: 121 MEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 177
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 178 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 633 VMLLEI 638
V++ E+
Sbjct: 227 VLIYEM 232
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ ++
Sbjct: 226 VLIYQM 231
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + ++ + + G+ +LH IIH D+KP N+
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 162
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLA+ T ++ T Y APE + VD++S G
Sbjct: 163 CTL-------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 634 MLLEII 639
++ E+I
Sbjct: 214 IMGEMI 219
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 25/205 (12%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCI 504
+Y + A GQ+V A+K++ K LRE++++ H N++ +
Sbjct: 66 AYGVVSSARRRLTGQQV--AIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILR 123
Query: 505 ------EQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQI 558
E +V +LM++ L + + T + + RGL Y+H Q+
Sbjct: 124 PTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS---AQV 179
Query: 559 IHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLL---KKDQTRTSTMIRGTMGYMAPE 615
IH D+KP N+ KI DFG+A+ L + T T Y APE
Sbjct: 180 IHRDLKPSNL-------LVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 616 WLRN-APVTAKVDVYSFGVMLLEII 639
+ + T +D++S G + E++
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEML 257
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 50 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + ++ + + G+ +LH IIH D+KP N+
Sbjct: 110 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 163
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLA+ T ++ T Y APE + VD++S G
Sbjct: 164 CTL-------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGC 214
Query: 634 MLLEII 639
++ E+I
Sbjct: 215 IMGEMI 220
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 23/185 (12%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVY 513
A + D Q+V V +KQ+E L E +++ + LV+L + ++ +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVM 120
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
++ DFG AK +K RT + GT Y+APE + + VD ++ GV
Sbjct: 178 GYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 634 MLLEI 638
++ E+
Sbjct: 227 LIYEM 231
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 23/185 (12%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVY 513
A + D Q+V V +KQ+E L E +++ + LV+L + ++ +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVM 120
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
++ DFG AK +K RT + GT Y+APE + + VD ++ GV
Sbjct: 178 GYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 634 MLLEI 638
++ E+
Sbjct: 227 LIYEM 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 23/185 (12%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVY 513
A + D Q+V V +KQ+E L E +++ + LV+L + ++ +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVM 120
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
++ DFG AK +K RT + GT Y+APE + + VD ++ GV
Sbjct: 178 GYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 634 MLLEI 638
++ E+
Sbjct: 227 LIYEM 231
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + ++ + + G+ +LH IIH D+KP N+
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 162
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLA+ T ++ T Y APE + VD++S G
Sbjct: 163 CTL-------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 634 MLLEII 639
++ E+I
Sbjct: 214 IMGEMI 219
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L+V E + G L + + + + +R EI I + YLH I H D+KP+N
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 161
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK + T+ T Y+APE L D
Sbjct: 162 LLYTSKRPNAIL----KLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCD 215
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 216 MWSLGVIMY-ILLC 228
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L+V E + G L + + + + +R EI I + YLH I H D+KP+N
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 153
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK + T+ T Y+APE L D
Sbjct: 154 LLYTSKRPNAIL----KLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCD 207
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 208 MWSLGVIMY-ILLC 220
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 136 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 186
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 234
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 235 ----ECQHLIRWCLALRPSDRPTFEEI 257
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 134 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 184
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 232
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 233 ----ECQHLIRWCLALRPSDRPTFEEI 255
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L+V E + G L + + + + +R EI I + YLH I H D+KP+N
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 151
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK + T+ T Y+APE L D
Sbjct: 152 LLYTSKRPNAIL----KLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCD 205
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 206 MWSLGVIMY-ILLC 218
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 135 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 185
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 233
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 234 ----ECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L+V E + G L + + + + +R EI I + YLH I H D+KP+N
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 146
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK + T+ T Y+APE L D
Sbjct: 147 LLYTSKRPNAIL----KLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCD 200
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 201 MWSLGVIMY-ILLC 213
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 482 LREVQVIGRTHHKNLVQLLGFCIEQ-------NHQLLVYELMKNGTLSAFLFRQEIPTWD 534
LRE++++ H+N++ + F I++ N ++ ELM+ + ++ + D
Sbjct: 57 LREIKILKHFKHENIITI--FNIQRPDSFENFNEVYIIQELMQTDLHR--VISTQMLSDD 112
Query: 535 KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLL 594
R + LH + +IH D+KP N+ K+ DFGLA+++
Sbjct: 113 HIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDL-------KVCDFGLARII 162
Query: 595 KKDQTRTS---------TMIRGTMGYMAPE-WLRNAPVTAKVDVYSFGVMLLEIIFCKR 643
+ S T T Y APE L +A + +DV+S G +L E +F +R
Sbjct: 163 DESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE-LFLRR 220
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L+V E + G L + + + + +R EI I + YLH I H D+KP+N
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 152
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK + T+ T Y+APE L D
Sbjct: 153 LLYTSKRPNAIL----KLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCD 206
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 207 MWSLGVIMY-ILLC 219
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 131 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 181
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 229
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 230 ----ECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L+V E + G L + + + + +R EI I + YLH I H D+KP+N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 145
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK + T+ T Y+APE L D
Sbjct: 146 LLYTSKRPNAIL----KLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCD 199
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 200 MWSLGVIMY-ILLC 212
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L+V E + G L + + + + +R EI I + YLH I H D+KP+N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 147
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK + T+ T Y+APE L D
Sbjct: 148 LLYTSKRPNAIL----KLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCD 201
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 202 MWSLGVIMY-ILLC 214
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 135 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 185
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 233
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 234 ----ECQHLIRWCLALRPSDRPTFEEI 256
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 178 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 228
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 276
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 277 ----ECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT Y+AP + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEYLAPAIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 136 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 186
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 234
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 235 ----ECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L+V E + G L + + + + +R EI I + YLH I H D+KP+N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 147
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK + T+ T Y+APE L D
Sbjct: 148 LLYTSKRPNAIL----KLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCD 201
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 202 MWSLGVIMY-ILLC 214
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 54 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 113
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + ++ + + G+ +LH IIH D+KP N+
Sbjct: 114 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 167
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLA+ T ++ T Y APE + VD++S G
Sbjct: 168 CTL-------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDLWSVGC 218
Query: 634 MLLEII 639
++ E++
Sbjct: 219 IMGEMV 224
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L+V E + G L + + + + +R EI I + YLH I H D+KP+N
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 191
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK + T+ T Y+APE L D
Sbjct: 192 LLYTSKRPNAIL----KLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCD 245
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 246 MWSLGVIMY-ILLC 258
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 131 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 181
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIGGQVFFRQRVSS--- 229
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 230 ----ECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 136 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 186
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 234
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 235 ----ECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 151 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 201
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 249
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 250 ----ECQHLIRWCLALRPSDRPTFEEI 272
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 465 VAVKQLEKVTGDGE---KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
VA+K++ ++ D E S LRE+ ++ HKN+V+L LV+E
Sbjct: 30 VALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLK 88
Query: 522 SAFLFRQEIPTWDKRVEIA----LGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXX 577
F + D EI + +GL + H ++H D+KPQN+
Sbjct: 89 KYF----DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNL-------LI 134
Query: 578 XXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVYSFGVMLL 636
K+A+FGLA+ R + T+ Y P+ L A + + +D++S G +
Sbjct: 135 NRNGELKLANFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 637 EI 638
E+
Sbjct: 194 EL 195
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 43 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 102
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + ++ + + G+ +LH IIH D+KP N+
Sbjct: 103 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 156
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633
KI DFGLA+ T ++ T Y APE + VD++S G
Sbjct: 157 CTL-------KILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDLWSVGC 207
Query: 634 MLLEII 639
++ E++
Sbjct: 208 IMGEMV 213
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 12/134 (8%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L+V E + G L + + + + +R EI I + YLH I H D+KP+N
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 197
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK + T+ T Y+APE L D
Sbjct: 198 LLYTSKRPNAIL----KLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCD 251
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 252 MWSLGVIMY-ILLC 264
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 26/157 (16%)
Query: 497 VQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQE---IP-TWDKRVEIALGIARGLLYLHE 552
VQ+L + H +V+EL+ LS + F +E +P D ++A I + + +LH
Sbjct: 80 VQMLEWFEHHGHICIVFELL---GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS 136
Query: 553 ECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK------------IADFGLAKLLKKDQTR 600
++ H D+KP+N+ K + DFG A D
Sbjct: 137 ---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY---DDEH 190
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
ST++ T Y APE + + DV+S G +L+E
Sbjct: 191 HSTLV-STRHYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 150 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 200
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 248
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 249 ----ECQHLIRWCLALRPSDRPTFEEI 271
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 178 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 228
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 276
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 277 ----ECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 12/134 (8%)
Query: 510 LLVYELMKNGTLSAFLFRQEIPTWDKR--VEIALGIARGLLYLHEECETQIIHCDIKPQN 567
L+V E + G L + + + + +R EI I + YLH I H D+KP+N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPEN 145
Query: 568 VXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVD 627
+ K+ DFG AK + T T Y+APE L D
Sbjct: 146 LLYTSKRPNAIL----KLTDFGFAKETTSHNSLTEPCY--TPYYVAPEVLGPEKYDKSCD 199
Query: 628 VYSFGVMLLEIIFC 641
++S GV++ I+ C
Sbjct: 200 MWSLGVIMY-ILLC 212
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 29/189 (15%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + ++ + + G+ +LH IIH D+KP N+
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 162
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRG---TMGYMAPEWLRNAPVTAKVDVYS 630
KI DFGLA+ TS M+ T Y APE + VD++S
Sbjct: 163 CTL-------KILDFGLAR-----TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWS 210
Query: 631 FGVMLLEII 639
G ++ E++
Sbjct: 211 VGCIMGEMV 219
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 163 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 213
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 261
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 262 ----ECQHLIRWCLALRPSDRPTFEEI 284
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 131 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 181
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSX--- 229
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 230 ----ECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 28/201 (13%)
Query: 450 ELREATNVFDGQEVEVAVKQLEK--VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN 507
+L+ A VF A+K L K + E + RE + + + L + + +
Sbjct: 94 KLKNADKVF-------AMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146
Query: 508 HQL-LVYELMKNGTLSAFL--FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIK 564
+ L LV + G L L F +P R +A ++ + + +H DIK
Sbjct: 147 NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMAR----FYLAEMVIAIDSVHQLHYVHRDIK 202
Query: 565 PQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR-----N 619
P N+ ++ADFG L +D T S++ GT Y++PE L+
Sbjct: 203 PDNILMDMNGHI-------RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 620 APVTAKVDVYSFGVMLLEIIF 640
+ D +S GV + E+++
Sbjct: 256 GRYGPECDWWSLGVCMYEMLY 276
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 170 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 220
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSS--- 268
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 269 ----ECQHLIRWCLALRPSDRPTFEEI 291
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 164 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 214
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIGGQVFFRQRVSS--- 262
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 263 ----ECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 164 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 214
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIGGQVFFRQRVSS--- 262
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 263 ----ECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 163 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 213
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIGGQVFFRQRVSS--- 261
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 262 ----ECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 163 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 213
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R +
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIGGQVFFRQRVSS--- 261
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 262 ----ECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 150 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 200
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSX--- 248
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 249 ----ECQHLIRWCLALRPSDRPTFEEI 271
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 158 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 208
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSX--- 256
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 257 ----ECQHLIRWCLALRPSDRPTFEEI 279
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 151 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 201
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSX--- 249
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 250 ----ECQHLIRWCLALRPSDRPTFEEI 272
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 454 ATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL-LV 512
A + D Q+V V +KQ+E L E +++ + LV+L F + N L +V
Sbjct: 70 AMKILDKQKV-VKLKQIEHT--------LNEKRILQAVNFPFLVKL-EFSFKDNSNLYMV 119
Query: 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXX 572
E + G + + L R + A I YLH +I+ D+KP+N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQ 176
Query: 573 XXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632
++ DFG AK +K RT + GT +APE + + VD ++ G
Sbjct: 177 QGYI-------QVTDFGFAKRVK---GRTWXLC-GTPEALAPEIILSKGYNKAVDWWALG 225
Query: 633 VMLLEI 638
V++ E+
Sbjct: 226 VLIYEM 231
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 178 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 228
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSX--- 276
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 277 ----ECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 164 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 214
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIGGQVFFRQRVSX--- 262
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 263 ----ECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 77/189 (40%), Gaps = 29/189 (15%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 51 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 110
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + ++ + + G+ +LH IIH D+KP N+
Sbjct: 111 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 164
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRG---TMGYMAPEWLRNAPVTAKVDVYS 630
KI DFGLA+ TS M+ T Y APE + VD++S
Sbjct: 165 CTL-------KILDFGLAR-----TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWS 212
Query: 631 FGVMLLEII 639
G ++ E+I
Sbjct: 213 VGCIMGEMI 221
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 164 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 214
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIGGQVFFRQRVSX--- 262
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 263 ----ECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 29/189 (15%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQ------LLVY 513
E VA+K+L + + K RE+ ++ +HKN++ LL Q +V
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 514 ELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
ELM + ++ + + G+ +LH IIH D+KP N+
Sbjct: 109 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSD 162
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRG---TMGYMAPEWLRNAPVTAKVDVYS 630
KI DFGLA+ TS M+ T Y APE + VD++S
Sbjct: 163 CTL-------KILDFGLAR-----TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWS 210
Query: 631 FGVMLLEII 639
G ++ E++
Sbjct: 211 VGCIMGEMV 219
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 163 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 213
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIGGQVFFRQRVSX--- 261
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 262 ----ECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 27/192 (14%)
Query: 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKN------LVQLLGFCIEQNHQLLVYELMKN 518
VA+K ++ V E + L E+ V+ + + K+ VQ+ + H + +EL+
Sbjct: 62 VALKIIKNVEKYKEAARL-EINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGL 120
Query: 519 GTLSAFLFRQEIPTWDKRV-EIALGIARGLLYLHEECETQIIHCDIKPQNVX-------- 569
T +P +V +A + + + +LH+ ++ H D+KP+N+
Sbjct: 121 STFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHD---NKLTHTDLKPENILFVNSDYEL 177
Query: 570 ----XXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAK 625
++ DFG A D ST++ T Y APE + +
Sbjct: 178 TYNLEKKRDERSVKSTAVRVVDFGSATF---DHEHHSTIV-STRHYRAPEVILELGWSQP 233
Query: 626 VDVYSFGVMLLE 637
DV+S G ++ E
Sbjct: 234 CDVWSIGCIIFE 245
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 183 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 233
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSX--- 281
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P+ RP+ +++
Sbjct: 282 ----ECQHLIRWCLALRPSDRPTFEEI 304
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 34/184 (18%)
Query: 478 EKSFLREVQVIGRT--HHKNLVQLLGFCIEQN----HQLLVYELMKNGTLSAFLFRQEIP 531
E S+ RE ++ H+N++ + I+ L+ + +NG+L +L +
Sbjct: 73 EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KST 129
Query: 532 TWDKR--VEIALGIARGLLYLHEEC-ETQ----IIHCDIKPQNVXXXXXXXXXXXXXXXK 584
T D + +++A GL +LH E TQ I H D+K +N+
Sbjct: 130 TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC------- 182
Query: 585 IADFGLAKLLKKDQTRT----STMIRGTMGYMAPEWL-----RNA-PVTAKVDVYSFGVM 634
IAD GLA D +T + GT YM PE L RN D+YSFG++
Sbjct: 183 IADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLI 241
Query: 635 LLEI 638
L E+
Sbjct: 242 LWEV 245
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 26/147 (17%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
++H DIK +N+ K+ DFG LLK T GT Y PEW+
Sbjct: 151 VLHRDIKDENILIDLNRGEL------KLIDFGSGALLKDT---VYTDFDGTRVYSPPEWI 201
Query: 618 RNAPVTAK-VDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676
R + V+S G++L +++ C D P + I+ V + R
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMV-CG--------DIPFEHDEEIIRGQVFFRQRVSX--- 249
Query: 677 TKFERITMVGLWCICPQPTLRPSMKQV 703
+ WC+ +P RP+ +++
Sbjct: 250 ----ECQHLIRWCLALRPXDRPTFEEI 272
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 25/172 (14%)
Query: 472 KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL------SAF- 524
KV G + +E+ ++ H+N++ L ++++E + + SAF
Sbjct: 39 KVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFE 98
Query: 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK 584
L +EI ++ +V L +LH I H DI+P+N+ K
Sbjct: 99 LNEREIVSYVHQV------CEALQFLHSH---NIGHFDIRPENI-----IYQTRRSSTIK 144
Query: 585 IADFGLAKLLK-KDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635
I +FG A+ LK D R ++ Y APE ++ V+ D++S G ++
Sbjct: 145 IIEFGQARQLKPGDNFR---LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 24/147 (16%)
Query: 506 QNHQLLVYELMKNGTLSAFLFR---QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCD 562
H + +EL+ T FL Q P R +A + L +LHE Q+ H D
Sbjct: 94 HGHMCIAFELLGKNTFE-FLKENNFQPYPLPHVR-HMAYQLCHALRFLHE---NQLTHTD 148
Query: 563 IKPQNV------------XXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMG 610
+KP+N+ ++ADFG A D +T++ T
Sbjct: 149 LKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF---DHEHHTTIV-ATRH 204
Query: 611 YMAPEWLRNAPVTAKVDVYSFGVMLLE 637
Y PE + DV+S G +L E
Sbjct: 205 YRPPEVILELGWAQPCDVWSIGCILFE 231
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 19/111 (17%)
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNV------------XXXXXXXXXXXXXXXKIA 586
+A + L +LHE Q+ H D+KP+N+ ++A
Sbjct: 137 MAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 193
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
DFG A D +T++ T Y PE + DV+S G +L E
Sbjct: 194 DFGSATF---DHEHHTTIV-ATRHYRPPEVILELGWAQPCDVWSIGCILFE 240
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 26/157 (16%)
Query: 497 VQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQE---IP-TWDKRVEIALGIARGLLYLHE 552
VQ+L + H +V+EL+ LS + F +E +P D ++A I + + +LH
Sbjct: 80 VQMLEWFEHHGHICIVFELL---GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS 136
Query: 553 ECETQIIHCDIKPQNVXXXXXXXXXXXXXXXK------------IADFGLAKLLKKDQTR 600
++ H D+KP+N+ K + DFG A D
Sbjct: 137 ---NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY---DDEH 190
Query: 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
ST++ Y APE + + DV+S G +L+E
Sbjct: 191 HSTLV-XXRHYRAPEVILALGWSQPCDVWSIGCILIE 226
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 19/111 (17%)
Query: 539 IALGIARGLLYLHEECETQIIHCDIKPQNV------------XXXXXXXXXXXXXXXKIA 586
+A + L +LHE Q+ H D+KP+N+ ++A
Sbjct: 160 MAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 216
Query: 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLE 637
DFG A D +T++ T Y PE + DV+S G +L E
Sbjct: 217 DFGSATF---DHEHHTTIV-ATRHYRPPEVILELGWAQPCDVWSIGCILFE 263
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 465 VAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN----HQLLVYELMKN 518
VA+K++ ++ D K LRE+ ++ R +++L I ++ +L + + +
Sbjct: 56 VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIAD 115
Query: 519 GTLSAFLFRQEIPTWDKRVE-IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXXXXX 577
L LF+ I ++ V+ I + G ++HE + IIH D+KP N
Sbjct: 116 SDLKK-LFKTPIFLTEQHVKTILYNLLLGEKFIHE---SGIIHRDLKPANCLLNQDCSV- 170
Query: 578 XXXXXXKIADFGLAKLLKKDQ 598
KI DFGLA+ + D+
Sbjct: 171 ------KICDFGLARTINSDK 185
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 33/214 (15%)
Query: 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE 505
FSY +L E + DG A+K++ + RE + +H N+++L+ +C+
Sbjct: 42 FSYVDLVEG--LHDGHFY--ALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLR 97
Query: 506 Q----NHQLLVYELMKNGTLSAFLFRQE----IPTWDKRVEIALGIARGLLYLHEECETQ 557
+ + L+ K GTL + R + T D+ + + LGI RGL +H +
Sbjct: 98 ERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA- 156
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAK--LLKKDQTRTSTMI------RGTM 609
H D+KP N+ + D G + + +R + + R T+
Sbjct: 157 --HRDLKPTNILLGDEGQPV-------LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 610 GYMAPEWL---RNAPVTAKVDVYSFGVMLLEIIF 640
Y APE + + + DV+S G +L ++F
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF 241
>pdb|3SBP|A Chain A, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|B Chain B, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|C Chain C, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|D Chain D, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|E Chain E, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|F Chain F, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|G Chain G, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|H Chain H, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBQ|A Chain A, Pseudomonas Stutzeri Nitrous Oxide Reductase, P65 Crystal
Form
pdb|3SBQ|B Chain B, Pseudomonas Stutzeri Nitrous Oxide Reductase, P65 Crystal
Form
pdb|3SBR|A Chain A, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|B Chain B, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|C Chain C, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|D Chain D, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|E Chain E, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|F Chain F, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|G Chain G, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|H Chain H, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
Length = 638
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 358 KMPLLNARRSNPSTNKMAAFIKVPKINNSQGQDNDSPSRVVLLAGFLS--CSMLAL 411
K P+L+ R+ + +K ++ VPK N G + S + + AG LS CSM+A+
Sbjct: 299 KTPVLDGRKKDGKDSKFTRYVPVPK--NPHGCNTSSDGKYFIAAGKLSPTCSMIAI 352
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N RQ + +D R + I + L Y H I+H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQL--RQTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 162
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 163 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 216
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 217 SLGCMLASMIFRK 229
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 462 EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIEQN----HQLLVYEL 515
E VA+K++ ++ D K LRE+ ++ R +++L I + +L +
Sbjct: 51 EKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110
Query: 516 MKNGTLSAFLFRQEIPTWDKRVE-IALGIARGLLYLHEECETQIIHCDIKPQNVXXXXXX 574
+ + L LF+ I ++ ++ I + G ++HE + IIH D+KP N
Sbjct: 111 IADSDLKK-LFKTPIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANC------ 160
Query: 575 XXXXXXXXXKIADFGLAKLL---------------------KKDQTRTSTMIRGTMGYMA 613
K+ DFGLA+ + K+ + T T Y A
Sbjct: 161 -LLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRA 219
Query: 614 PEW-LRNAPVTAKVDVYSFGVMLLEII 639
PE L T +D++S G + E++
Sbjct: 220 PELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 558 IIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617
I H DIKPQN+ K+ DFG AK L + + + + Y APE +
Sbjct: 162 ICHRDIKPQNL------LVNSKDNTLKLCDFGSAKKLIPSEPSVAXIC--SRFYRAPELM 213
Query: 618 RNA-PVTAKVDVYSFGVMLLEIIFCK 642
A T +D++S G + E+I K
Sbjct: 214 LGATEYTPSIDLWSIGCVFGELILGK 239
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 76/192 (39%), Gaps = 27/192 (14%)
Query: 458 FDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE--QNHQLLVYEL 515
+ G ++ V V ++ + + F E + H N++ +LG C H L+
Sbjct: 31 WQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHW 90
Query: 516 MKNGTLSAFLFRQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXXXXX 573
M G+L L + + V+ AL +ARG+ +LH E I + ++V
Sbjct: 91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSV----- 144
Query: 574 XXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM---GYMAPEWLRNAPVTA---KVD 627
+ D + + + S G M ++APE L+ P D
Sbjct: 145 -----------MIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSAD 193
Query: 628 VYSFGVMLLEII 639
++SF V+L E++
Sbjct: 194 MWSFAVLLWELV 205
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 23/200 (11%)
Query: 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHH-KNLVQLLGFCIE 505
Y E+ EA N+ + ++V VK L+ V + K RE++++ N++ L +
Sbjct: 49 KYSEVFEAINITNNEKV--VVKILKPVKKNKIK---REIKILENLRGGPNIITLADIVKD 103
Query: 506 --QNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI 563
LV+E + N Q + +D R + I + L Y H I+H D+
Sbjct: 104 PVSRTPALVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDV 157
Query: 564 KPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV- 622
KP NV ++ D+GLA+ Q + + + PE L + +
Sbjct: 158 KPHNV------MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMY 209
Query: 623 TAKVDVYSFGVMLLEIIFCK 642
+D++S G ML +IF K
Sbjct: 210 DYSLDMWSLGCMLASMIFRK 229
>pdb|1BWU|D Chain D, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 109
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 35/89 (39%)
Query: 74 TLVWSANRDDPAQVGSSINLTVTGQLVLTHSNGTQFKIYNGTLTVSALMQDSGNFLYSNA 133
T VWS+N D P + G A++Q GNF+ +A
Sbjct: 38 TAVWSSNTDIPGKKG-----------------------------CKAVLQSDGNFVVYDA 68
Query: 134 NGSVDYST------GRFVLEIQMDGNVVL 156
G+ +++ G +VL +Q DGNVV+
Sbjct: 69 EGASLWASHSVRGNGNYVLVLQEDGNVVI 97
>pdb|1BWU|Q Chain Q, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 109
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 35/89 (39%)
Query: 74 TLVWSANRDDPAQVGSSINLTVTGQLVLTHSNGTQFKIYNGTLTVSALMQDSGNFLYSNA 133
T VWS+N D P + G A++Q GNF+ +A
Sbjct: 38 TAVWSSNTDIPGKKG-----------------------------CKAVLQSDGNFVVYDA 68
Query: 134 NGSVDYST------GRFVLEIQMDGNVVL 156
G+ +++ G +VL +Q DGNVV+
Sbjct: 69 EGASLWASHSVRGNGNYVLVLQEDGNVVI 97
>pdb|3GIS|X Chain X, Crystal Structure Of Na-Free Thrombin In Complex With
Thrombomodulin
pdb|3GIS|Y Chain Y, Crystal Structure Of Na-Free Thrombin In Complex With
Thrombomodulin
pdb|3GIS|Z Chain Z, Crystal Structure Of Na-Free Thrombin In Complex With
Thrombomodulin
Length = 121
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
Query: 259 CTSDNNKEVTCECLRGYSPVDPNSPSKGCYPDVLVDFCDTKSSPADFTVEAIDDADIPNG 318
C N C C G++P+ P+ P + C FC+ + PAD + P G
Sbjct: 16 CQPLNQTSYLCVCAEGFAPI-PHEPHR-CQL-----FCNQTACPADCDPNTQASCECPEG 68
Query: 319 DLRDMARITTTDVNEC 334
+ D I TD++EC
Sbjct: 69 YILDDGFI-CTDIDEC 83
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNV 568
+ +GL YLH +C +IIH DIKP+N+
Sbjct: 149 VLQGLDYLHSKC--KIIHTDIKPENI 172
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNV 568
+ +GL YLH +C +IIH DIKP+N+
Sbjct: 139 VLQGLDYLHTKC--RIIHTDIKPENI 162
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
Query: 543 IARGLLYLHEECETQIIHCDIKPQNV 568
+ +GL YLH +C +IIH DIKP+N+
Sbjct: 155 VLQGLDYLHTKC--RIIHTDIKPENI 178
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 162
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 163 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 216
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 217 SLGCMLASMIFRK 229
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 110 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 161
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 162 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 215
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 216 SLGCMLASMIFRK 228
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 162
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 163 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 216
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 217 SLGCMLASMIFRK 229
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 162
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 163 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 216
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 217 SLGCMLASMIFRK 229
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 162
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 163 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 216
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 217 SLGCMLASMIFRK 229
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 162
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 163 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 216
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 217 SLGCMLASMIFRK 229
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 110 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 161
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 162 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 215
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 216 SLGCMLASMIFRK 228
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 109 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 160
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 161 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 214
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 215 SLGCMLASMIFRK 227
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 162
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 163 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 216
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 217 SLGCMLASMIFRK 229
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 162
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 163 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 216
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 217 SLGCMLASMIFRK 229
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 116 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 167
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 168 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 221
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 222 SLGCMLASMIFRK 234
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 162
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 163 ----MIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 216
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 217 SLGCMLASMIFRK 229
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + I + L Y H I+H D+KP NV
Sbjct: 111 LVFEHVNNTDFKQLY--QTLTDYDIRFYM-YEILKALDYCHS---MGIMHRDVKPHNV-- 162
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 163 ----LIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 216
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF K
Sbjct: 217 SLGCMLASMIFRK 229
>pdb|1KJ1|A Chain A, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
pdb|1KJ1|P Chain P, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 109
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 120 ALMQDSGNFLYSNANGSVDYST------GRFVLEIQMDGNVVL 156
A++Q GNF+ +A G +++ G +VL +Q DGNVV+
Sbjct: 55 AVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVI 97
>pdb|1BWU|A Chain A, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 106
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 120 ALMQDSGNFLYSNANGSVDYST------GRFVLEIQMDGNVVL 156
A++Q GNF+ +A G +++ G +VL +Q DGNVV+
Sbjct: 55 AVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVI 97
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 11/144 (7%)
Query: 506 QNHQLLVYELMKNGTL-SAFLFRQEIPTWDKRVEIALGIARGLLYLHEEC-ETQIIHCDI 563
QN +LV EL GTL +A + P + + A +LY+ E+ + +IIH DI
Sbjct: 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDI 198
Query: 564 KPQNVXX----XXXXXXXXXXXXXKIADFGLA---KLLKKDQTRTSTMIRGTMGYMAPEW 616
KP N + D G + KL K T+ T G+ E
Sbjct: 199 KPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKC--ETSGFQCVEM 256
Query: 617 LRNAPVTAKVDVYSFGVMLLEIIF 640
L N P ++D + + ++F
Sbjct: 257 LSNKPWNYQIDYFGVAATVYCMLF 280
>pdb|2VZT|A Chain A, Complex Of Amycolatopsis Orientalis Exo-Chitosanase Csxa
E541a With Pnp-Beta-D-Glucosamine
pdb|2VZT|B Chain B, Complex Of Amycolatopsis Orientalis Exo-Chitosanase Csxa
E541a With Pnp-Beta-D-Glucosamine
pdb|2VZV|A Chain A, Substrate Complex Of Amycolatopsis Orientalis Exo-
Chitosanase Csxa E541a With Chitosan
pdb|2VZV|B Chain B, Substrate Complex Of Amycolatopsis Orientalis Exo-
Chitosanase Csxa E541a With Chitosan
Length = 1032
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 159 FRFADPAYWYTSTRGDQNVSLIFNQSTSF-LYVRNKTTIRYPMT-----TQVPTPTEDYY 212
+ + P YWY ++ D+ + FN +TS + + T++ M+ T P+ Y
Sbjct: 516 YDYVPPVYWYDKSQKDRGGAWSFNSATSAGVDIPTMDTLKRMMSASELDTMWKNPSAKQY 575
Query: 213 HRATISDHGNFQ 224
HR++ GN +
Sbjct: 576 HRSSSDTFGNLK 587
>pdb|1BWU|P Chain P, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 106
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 120 ALMQDSGNFLYSNANGSVDYST------GRFVLEIQMDGNVVL 156
A++Q GNF+ +A G +++ G +VL +Q DGNVV+
Sbjct: 55 AVLQADGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVI 97
>pdb|2VZO|A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo-
Chitosanase Csxa
pdb|2VZO|B Chain B, Crystal Structure Of Amycolatopsis Orientalis Exo-
Chitosanase Csxa
Length = 1032
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 159 FRFADPAYWYTSTRGDQNVSLIFNQSTSF-LYVRNKTTIRYPMT-----TQVPTPTEDYY 212
+ + P YWY ++ D+ + FN TS + + T++ M+ T P+ Y
Sbjct: 516 YDYVPPVYWYDKSQKDRGGAWSFNSETSAGVDIPTMDTLKRMMSASELDTMWKNPSAKQY 575
Query: 213 HRATISDHGNFQ 224
HR++ GN +
Sbjct: 576 HRSSSDTFGNLK 587
>pdb|2VZS|A Chain A, Chitosan Product Complex Of Amycolatopsis Orientalis Exo-
Chitosanase Csxa
pdb|2VZS|B Chain B, Chitosan Product Complex Of Amycolatopsis Orientalis Exo-
Chitosanase Csxa
pdb|2X05|A Chain A, Inhibition Of The Exo-Beta-D-Glucosaminidase Csxa By A
Glucosamine-Configured Castanospermine And An Amino-
Australine Analogue
pdb|2X05|B Chain B, Inhibition Of The Exo-Beta-D-Glucosaminidase Csxa By A
Glucosamine-Configured Castanospermine And An Amino-
Australine Analogue
pdb|2X09|A Chain A, Inhibition Of The Exo-Beta-D-Glucosaminidase Csxa By A
Glucosamine-Configured Castanospermine And An Amino-
Australine Analogue
pdb|2X09|B Chain B, Inhibition Of The Exo-Beta-D-Glucosaminidase Csxa By A
Glucosamine-Configured Castanospermine And An Amino-
Australine Analogue
Length = 1032
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 159 FRFADPAYWYTSTRGDQNVSLIFNQSTSF-LYVRNKTTIRYPMT-----TQVPTPTEDYY 212
+ + P YWY ++ D+ + FN TS + + T++ M+ T P+ Y
Sbjct: 516 YDYVPPVYWYDKSQKDRGGAWSFNSETSAGVDIPTMDTLKRMMSASELDTMWKNPSAKQY 575
Query: 213 HRATISDHGNFQ 224
HR++ GN +
Sbjct: 576 HRSSSDTFGNLK 587
>pdb|2VZU|A Chain A, Complex Of Amycolatopsis Orientalis Exo-Chitosanase Csxa
D469a With Pnp-Beta-D-Glucosamine
pdb|2VZU|B Chain B, Complex Of Amycolatopsis Orientalis Exo-Chitosanase Csxa
D469a With Pnp-Beta-D-Glucosamine
Length = 1032
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 159 FRFADPAYWYTSTRGDQNVSLIFNQSTSF-LYVRNKTTIRYPMT-----TQVPTPTEDYY 212
+ + P YWY ++ D+ + FN TS + + T++ M+ T P+ Y
Sbjct: 516 YDYVPPVYWYDKSQKDRGGAWSFNSETSAGVDIPTMDTLKRMMSASELDTMWKNPSAKQY 575
Query: 213 HRATISDHGNFQ 224
HR++ GN +
Sbjct: 576 HRSSSDTFGNLK 587
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 495 NLVQLLGFCIEQNHQL--LVYELMKNGTLSAFLFRQEIPT---WDKRVEIALGIARGLLY 549
N+V+LL +Q+ + L++E + N F+ PT +D R I + + L Y
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDY 142
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
H + I+H D+KP NV ++ D+GLA+ + + +
Sbjct: 143 CHSQG---IMHRDVKPHNV------MIDHELRKLRLIDWGLAEFYHPGKEYNVRV--ASR 191
Query: 610 GYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCK 642
+ PE L + +D++S G M +IF K
Sbjct: 192 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 225
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 495 NLVQLLGFCIEQNHQL--LVYELMKNGTLSAFLFRQEIPT---WDKRVEIALGIARGLLY 549
N+V+LL +Q+ + L++E + N F+ PT +D R I + + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDY 140
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
H + I+H D+KP NV ++ D+GLA+ + + +
Sbjct: 141 CHSQG---IMHRDVKPHNV------MIDHELRKLRLIDWGLAEFYHPGKEYNVRV--ASR 189
Query: 610 GYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCK 642
+ PE L + +D++S G M +IF K
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 495 NLVQLLGFCIEQNHQL--LVYELMKNGTLSAFLFRQEIPT---WDKRVEIALGIARGLLY 549
N+V+LL +Q+ + L++E + N F+ PT +D R I + + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDY 140
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
H + I+H D+KP NV ++ D+GLA+ + + +
Sbjct: 141 CHSQG---IMHRDVKPHNV------MIDHELRKLRLIDWGLAEFYHPGKEYNVRV--ASR 189
Query: 610 GYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCK 642
+ PE L + +D++S G M +IF K
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
>pdb|1WZ6|A Chain A, Solution Structure Of The Hmg_box Domain Of Murine Bobby
Sox Homolog
Length = 82
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 638 IIFCKRHTELHRVDEPTLAN---GMILTDW 664
++FCKRH L R + P L N IL DW
Sbjct: 16 LLFCKRHRSLVRQEHPRLDNRGATKILADW 45
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 495 NLVQLLGFCIEQNHQL--LVYELMKNGTLSAFLFRQEIPT---WDKRVEIALGIARGLLY 549
N+V+LL +Q+ + L++E + N F+ PT +D R I + + L Y
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDY 161
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
H + I+H D+KP NV ++ D+GLA+ + + +
Sbjct: 162 CHSQG---IMHRDVKPHNV------MIDHELRKLRLIDWGLAEFYHPGKEYNVRV--ASR 210
Query: 610 GYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCK 642
+ PE L + +D++S G M +IF K
Sbjct: 211 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 244
>pdb|2WSX|A Chain A, Crystal Structure Of Carnitine Transporter From
Escherichia Coli
pdb|2WSX|B Chain B, Crystal Structure Of Carnitine Transporter From
Escherichia Coli
pdb|2WSX|C Chain C, Crystal Structure Of Carnitine Transporter From
Escherichia Coli
Length = 504
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 403 FLSCSMLALLF-GSIVIYYHPLTRPYMCVQPSPKPKPPEINMKVFSYQELREATNVFDGQ 461
F SC+ A+LF GSI IYY+ T P+ S K + +F + L AT F
Sbjct: 96 FASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSF--- 152
Query: 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ VA F+R+++VI LV L+G E++ + L ++ N L
Sbjct: 153 -LSVAFAYF---------FFVRKMEVI--RPSSTLVPLVG---EKHAKGLFGTIVDNFYL 197
Query: 522 SAFLF 526
A +F
Sbjct: 198 VALIF 202
>pdb|3HFX|A Chain A, Crystal Structure Of Carnitine Transporter
Length = 504
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 403 FLSCSMLALLF-GSIVIYYHPLTRPYMCVQPSPKPKPPEINMKVFSYQELREATNVFDGQ 461
F SC+ A+LF GSI IYY+ T P+ S K + +F + L AT F
Sbjct: 96 FASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSF--- 152
Query: 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521
+ VA F+R+++VI LV L+G E++ + L ++ N L
Sbjct: 153 -LSVAFAYF---------FFVRKMEVI--RPSSTLVPLVG---EKHAKGLFGTIVDNFYL 197
Query: 522 SAFLF 526
A +F
Sbjct: 198 VALIF 202
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 495 NLVQLLGFCIEQNHQL--LVYELMKNGTLSAFLFRQEIPT---WDKRVEIALGIARGLLY 549
N+V+LL +Q+ + L++E + N F+ PT +D R I + + L Y
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDY 141
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
H + I+H D+KP NV ++ D+GLA+ + + +
Sbjct: 142 CHSQG---IMHRDVKPHNV------MIDHELRKLRLIDWGLAEFYHPGKEYNVRV--ASR 190
Query: 610 GYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCK 642
+ PE L + +D++S G M +IF K
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 224
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 495 NLVQLLGFCIEQNHQL--LVYELMKNGTLSAFLFRQEIPT---WDKRVEIALGIARGLLY 549
N+V+LL +Q+ + L++E + N F+ PT +D R I + + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDY 140
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
H + I+H D+KP NV ++ D+GLA+ + + +
Sbjct: 141 CHSQG---IMHRDVKPHNV------MIDHELRKLRLIDWGLAEFYHPGKEYNVRV--ASR 189
Query: 610 GYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCK 642
+ PE L + +D++S G M +IF K
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 495 NLVQLLGFCIEQNHQL--LVYELMKNGTLSAFLFRQEIPT---WDKRVEIALGIARGLLY 549
N+V+LL +Q+ + L++E + N F+ PT +D R I + + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDY 140
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
H + I+H D+KP NV ++ D+GLA+ + + +
Sbjct: 141 CHSQG---IMHRDVKPHNV------MIDHELRKLRLIDWGLAEFYHPGKEYNVRV--ASR 189
Query: 610 GYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCK 642
+ PE L + +D++S G M +IF K
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 495 NLVQLLGFCIEQNHQL--LVYELMKNGTLSAFLFRQEIPT---WDKRVEIALGIARGLLY 549
N+V+LL +Q+ + L++E + N F+ PT +D R I + + L Y
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDY 141
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
H + I+H D+KP NV ++ D+GLA+ + + +
Sbjct: 142 CHSQG---IMHRDVKPHNV------MIDHELRKLRLIDWGLAEFYHPGKEYNVRV--ASR 190
Query: 610 GYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCK 642
+ PE L + +D++S G M +IF K
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 224
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 495 NLVQLLGFCIEQNHQL--LVYELMKNGTLSAFLFRQEIPT---WDKRVEIALGIARGLLY 549
N+V+LL +Q+ + L++E + N F+ PT +D R I + + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDY 140
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
H + I+H D+KP NV ++ D+GLA+ + + +
Sbjct: 141 CHSQG---IMHRDVKPHNV------MIDHELRKLRLIDWGLAEFYHPGKEYNVRV--ASR 189
Query: 610 GYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCK 642
+ PE L + +D++S G M +IF K
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 495 NLVQLLGFCIEQNHQL--LVYELMKNGTLSAFLFRQEIPT---WDKRVEIALGIARGLLY 549
N+V+LL +Q+ + L++E + N F+ PT +D R I + + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRYYI-YELLKALDY 140
Query: 550 LHEECETQIIHCDIKPQNVXXXXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTM 609
H + I+H D+KP NV ++ D+GLA+ + + +
Sbjct: 141 CHSQG---IMHRDVKPHNV------MIDHELRKLRLIDWGLAEFYHPGKEYNVRV--ASR 189
Query: 610 GYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCK 642
+ PE L + +D++S G M +IF K
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRK 223
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + + + L Y H + I+H D+KP NV
Sbjct: 112 LVFEYINNTDFKQLY--QILTDFDIRFYM-YELLKALDYCHSKG---IMHRDVKPHNV-- 163
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 164 ----MIDHQQKKLRLIDWGLAEFYHPAQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 217
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF +
Sbjct: 218 SLGCMLASMIFRR 230
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVXX 570
LV+E + N Q + +D R + + + L Y H + I+H D+KP NV
Sbjct: 117 LVFEYINNTDFKQLY--QILTDFDIRFYM-YELLKALDYCHSKG---IMHRDVKPHNV-- 168
Query: 571 XXXXXXXXXXXXXKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-TAKVDVY 629
++ D+GLA+ Q + + + PE L + + +D++
Sbjct: 169 ----MIDHQQKKLRLIDWGLAEFYHPAQEYNVRV--ASRYFKGPELLVDYQMYDYSLDMW 222
Query: 630 SFGVMLLEIIFCK 642
S G ML +IF +
Sbjct: 223 SLGCMLASMIFRR 235
>pdb|1KJ1|D Chain D, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
pdb|1KJ1|Q Chain Q, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 109
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 114 GTLTVSALMQDSGNFLYSNANGSVDYST------GRFVLEIQMDGNVVL 156
G A++Q GNF+ +A G +++ G +VL +Q DGNVV+
Sbjct: 49 GKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVI 97
>pdb|1DQB|A Chain A, Nmr Structure Of Thrombomodulin Egf(4-5)
Length = 83
Score = 29.6 bits (65), Expect = 6.7, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 259 CTSDNNKEVTCECLRGYSPVDPNSPSKGCYPDVLVDFCDTKSSPADFTVEAIDDADIPNG 318
C N C C G++P+ P+ P + C FC+ + PAD + P G
Sbjct: 17 CQPLNQTSYLCVCAEGFAPI-PHEPHR-CQM-----FCNQTACPADCDPNTQASCECPEG 69
Query: 319 DLRDMARITTTDVNE 333
+ D I TD++E
Sbjct: 70 YILDDGFI-CTDIDE 83
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,854,779
Number of Sequences: 62578
Number of extensions: 921431
Number of successful extensions: 3625
Number of sequences better than 100.0: 985
Number of HSP's better than 100.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 520
Number of HSP's that attempted gapping in prelim test: 2217
Number of HSP's gapped (non-prelim): 1110
length of query: 725
length of database: 14,973,337
effective HSP length: 106
effective length of query: 619
effective length of database: 8,340,069
effective search space: 5162502711
effective search space used: 5162502711
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)