Query 039817
Match_columns 725
No_of_seqs 436 out of 3481
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 13:29:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039817.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039817hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 2.7E-47 5.9E-52 404.0 25.2 259 442-713 61-355 (361)
2 KOG0192 Tyrosine kinase specif 100.0 2.7E-42 6E-47 362.8 16.6 247 444-712 50-305 (362)
3 KOG0581 Mitogen-activated prot 100.0 1.4E-40 3.1E-45 332.3 16.0 226 462-706 104-335 (364)
4 KOG0197 Tyrosine kinases [Sign 100.0 2.8E-40 6E-45 345.6 18.3 230 463-714 231-465 (468)
5 KOG1026 Nerve growth factor re 100.0 3E-40 6.5E-45 361.5 17.5 245 446-712 497-764 (774)
6 KOG0615 Serine/threonine prote 100.0 1E-39 2.2E-44 327.8 11.1 242 443-706 180-437 (475)
7 KOG0575 Polo-like serine/threo 100.0 4.2E-38 9E-43 332.1 18.2 236 446-706 29-269 (592)
8 KOG0595 Serine/threonine-prote 100.0 1.9E-38 4.1E-43 319.4 13.5 198 443-648 18-217 (429)
9 KOG0591 NIMA (never in mitosis 100.0 2.8E-39 6E-44 309.1 6.5 244 444-709 28-284 (375)
10 KOG0196 Tyrosine kinase, EPH ( 100.0 3.1E-38 6.8E-43 338.2 10.1 230 461-711 656-892 (996)
11 KOG0578 p21-activated serine/t 100.0 2.7E-36 5.8E-41 316.0 14.9 222 461-706 297-523 (550)
12 KOG1095 Protein tyrosine kinas 100.0 2.7E-36 5.8E-41 342.3 15.2 247 445-712 702-963 (1025)
13 KOG0198 MEKK and related serin 100.0 2E-36 4.3E-41 308.7 11.3 245 444-709 26-279 (313)
14 KOG0598 Ribosomal protein S6 k 100.0 3.6E-36 7.8E-41 300.7 12.7 237 444-704 34-279 (357)
15 KOG0194 Protein tyrosine kinas 100.0 1.4E-36 3E-41 323.3 9.8 255 443-716 165-426 (474)
16 KOG4721 Serine/threonine prote 100.0 1.4E-35 3E-40 307.0 15.8 238 445-709 120-367 (904)
17 PHA02988 hypothetical protein; 100.0 3.4E-35 7.3E-40 306.1 18.2 229 462-711 43-280 (283)
18 KOG0611 Predicted serine/threo 100.0 3E-35 6.5E-40 293.4 12.5 240 443-707 61-304 (668)
19 KOG1094 Discoidin domain recep 100.0 2.9E-35 6.3E-40 306.0 12.5 231 462-710 562-804 (807)
20 KOG0582 Ste20-like serine/thre 100.0 2E-34 4.3E-39 292.5 17.6 222 463-706 52-293 (516)
21 KOG0592 3-phosphoinositide-dep 100.0 5.8E-35 1.2E-39 303.1 13.7 243 443-707 81-339 (604)
22 KOG0600 Cdc2-related protein k 100.0 8.5E-35 1.8E-39 299.5 14.3 261 444-723 126-416 (560)
23 cd05102 PTKc_VEGFR3 Catalytic 100.0 1E-34 2.2E-39 310.9 15.6 247 444-711 16-335 (338)
24 KOG0583 Serine/threonine prote 100.0 1.7E-34 3.6E-39 307.0 16.8 238 443-705 25-274 (370)
25 PF07714 Pkinase_Tyr: Protein 100.0 3.5E-35 7.6E-40 302.0 10.2 241 446-707 10-259 (259)
26 KOG0588 Serine/threonine prote 100.0 2.6E-34 5.7E-39 304.0 16.2 240 442-707 19-264 (786)
27 KOG0661 MAPK related serine/th 100.0 5.4E-35 1.2E-39 298.8 9.4 249 444-707 19-292 (538)
28 KOG4278 Protein tyrosine kinas 100.0 1.1E-34 2.4E-39 302.5 11.2 242 445-711 277-524 (1157)
29 cd05571 STKc_PKB Catalytic dom 100.0 4.8E-34 1E-38 303.4 14.8 238 446-706 6-251 (323)
30 KOG0193 Serine/threonine prote 100.0 3.3E-34 7.2E-39 300.9 12.7 231 464-712 416-655 (678)
31 cd05104 PTKc_Kit Catalytic dom 100.0 1E-33 2.3E-38 306.7 17.1 249 444-710 44-374 (375)
32 KOG0589 Serine/threonine prote 100.0 7.2E-34 1.6E-38 296.7 15.1 240 445-706 14-258 (426)
33 cd05064 PTKc_EphR_A10 Catalyti 100.0 9E-34 2E-38 292.8 15.6 248 444-710 14-265 (266)
34 KOG3653 Transforming growth fa 100.0 3.8E-33 8.3E-38 285.0 19.8 252 446-712 221-505 (534)
35 cd05585 STKc_YPK1_like Catalyt 100.0 8.8E-34 1.9E-38 299.9 15.8 236 447-706 5-247 (312)
36 cd05106 PTKc_CSF-1R Catalytic 100.0 9.6E-34 2.1E-38 306.7 15.9 250 444-711 47-373 (374)
37 KOG0597 Serine-threonine prote 100.0 3.6E-34 7.8E-39 296.9 11.7 237 445-706 12-251 (808)
38 cd05096 PTKc_DDR1 Catalytic do 100.0 1.8E-33 3.9E-38 296.5 17.0 232 460-709 44-304 (304)
39 KOG0593 Predicted protein kina 100.0 5.5E-34 1.2E-38 275.5 11.3 248 445-706 12-284 (396)
40 cd05048 PTKc_Ror Catalytic Dom 100.0 2.6E-33 5.7E-38 292.0 16.4 246 446-710 16-283 (283)
41 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.3E-33 1.4E-37 287.7 18.9 230 460-708 42-274 (274)
42 cd05584 STKc_p70S6K Catalytic 100.0 2.6E-33 5.6E-38 297.8 15.6 239 446-706 7-256 (323)
43 cd05116 PTKc_Syk Catalytic dom 100.0 4.9E-33 1.1E-37 285.8 17.1 245 446-710 6-255 (257)
44 cd07848 STKc_CDKL5 Catalytic d 100.0 4.8E-33 1E-37 290.7 17.0 248 447-706 13-284 (287)
45 cd05593 STKc_PKB_gamma Catalyt 100.0 7.2E-33 1.6E-37 294.8 18.5 237 447-706 7-251 (328)
46 PLN00113 leucine-rich repeat r 100.0 4.2E-32 9.2E-37 330.1 27.3 226 461-712 714-953 (968)
47 KOG0201 Serine/threonine prote 100.0 1.9E-34 4.1E-39 292.7 5.4 242 443-706 21-263 (467)
48 cd05115 PTKc_Zap-70 Catalytic 100.0 8.1E-33 1.8E-37 284.1 17.3 243 445-710 5-255 (257)
49 cd05052 PTKc_Abl Catalytic dom 100.0 1.3E-32 2.7E-37 283.7 18.8 241 448-710 19-262 (263)
50 cd05595 STKc_PKB_beta Catalyti 100.0 7.1E-33 1.5E-37 294.3 17.2 236 447-706 7-251 (323)
51 cd05094 PTKc_TrkC Catalytic do 100.0 9E-33 2E-37 289.3 17.5 230 461-712 34-284 (291)
52 KOG1989 ARK protein kinase fam 100.0 2.1E-33 4.6E-38 309.5 13.1 251 444-716 46-317 (738)
53 KOG4257 Focal adhesion tyrosin 100.0 2.2E-33 4.8E-38 293.5 12.3 245 445-711 399-650 (974)
54 cd05049 PTKc_Trk Catalytic dom 100.0 1.1E-32 2.3E-37 287.0 17.4 242 446-709 16-280 (280)
55 PTZ00263 protein kinase A cata 100.0 1.3E-32 2.7E-37 293.2 18.4 234 445-706 28-271 (329)
56 cd05093 PTKc_TrkB Catalytic do 100.0 5.7E-33 1.2E-37 290.3 15.3 245 446-712 16-281 (288)
57 cd05033 PTKc_EphR Catalytic do 100.0 9.8E-33 2.1E-37 285.0 16.8 248 444-710 13-265 (266)
58 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.3E-33 9.3E-38 297.5 14.6 237 446-706 12-257 (333)
59 KOG0585 Ca2+/calmodulin-depend 100.0 2.2E-33 4.7E-38 286.5 11.3 247 444-710 106-376 (576)
60 PTZ00426 cAMP-dependent protei 100.0 5.3E-33 1.2E-37 296.9 14.9 235 445-706 40-284 (340)
61 cd05612 STKc_PRKX_like Catalyt 100.0 3E-33 6.6E-38 292.8 12.8 235 445-706 11-254 (291)
62 cd06649 PKc_MEK2 Catalytic dom 100.0 1.6E-32 3.4E-37 292.8 18.4 247 446-707 16-302 (331)
63 KOG0033 Ca2+/calmodulin-depend 100.0 1.5E-33 3.3E-38 264.4 9.0 241 445-706 21-267 (355)
64 cd05047 PTKc_Tie Catalytic dom 100.0 1.5E-32 3.3E-37 284.3 17.2 243 446-711 6-269 (270)
65 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.6E-33 2.1E-37 300.2 16.3 251 444-712 46-399 (400)
66 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.5E-32 3.4E-37 282.6 16.6 242 446-710 17-261 (261)
67 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.3E-32 7.2E-37 279.4 18.9 240 446-708 15-256 (256)
68 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5E-32 1.1E-36 279.1 20.2 228 462-708 32-262 (262)
69 cd05631 STKc_GRK4 Catalytic do 100.0 2.9E-32 6.3E-37 284.5 18.5 238 447-706 12-261 (285)
70 cd05088 PTKc_Tie2 Catalytic do 100.0 8.7E-33 1.9E-37 291.1 14.3 247 444-711 16-281 (303)
71 cd05594 STKc_PKB_alpha Catalyt 100.0 1.5E-32 3.2E-37 292.3 16.2 237 447-706 7-252 (325)
72 cd05040 PTKc_Ack_like Catalyti 100.0 2.9E-32 6.2E-37 279.9 17.7 244 446-708 6-256 (257)
73 cd05582 STKc_RSK_N N-terminal 100.0 4.2E-33 9.1E-38 295.6 11.9 234 447-702 8-245 (318)
74 PTZ00267 NIMA-related protein 100.0 3.4E-32 7.4E-37 303.8 19.8 238 447-706 79-323 (478)
75 cd05072 PTKc_Lyn Catalytic dom 100.0 3.3E-32 7.2E-37 280.2 18.2 242 446-710 17-261 (261)
76 cd05090 PTKc_Ror1 Catalytic do 100.0 2.2E-32 4.8E-37 285.1 17.0 246 445-709 15-282 (283)
77 cd05068 PTKc_Frk_like Catalyti 100.0 4.9E-32 1.1E-36 278.9 19.2 242 446-710 17-261 (261)
78 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2E-32 4.3E-37 281.4 16.2 246 445-708 5-258 (258)
79 KOG0659 Cdk activating kinase 100.0 1.5E-32 3.3E-37 261.4 14.0 263 444-721 11-295 (318)
80 cd05591 STKc_nPKC_epsilon Cata 100.0 1.6E-32 3.4E-37 291.6 15.6 237 446-706 6-254 (321)
81 cd05089 PTKc_Tie1 Catalytic do 100.0 1.8E-32 4E-37 287.8 15.9 247 444-713 11-278 (297)
82 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.7E-32 1E-36 278.3 18.3 226 463-708 29-256 (256)
83 cd05588 STKc_aPKC Catalytic do 100.0 6.2E-32 1.3E-36 287.9 19.7 244 447-706 7-262 (329)
84 cd05062 PTKc_IGF-1R Catalytic 100.0 2.3E-32 4.9E-37 284.1 15.9 245 446-709 17-277 (277)
85 KOG0616 cAMP-dependent protein 100.0 1.4E-32 3.1E-37 265.4 13.2 212 462-697 69-283 (355)
86 cd05108 PTKc_EGFR Catalytic do 100.0 1.7E-32 3.7E-37 290.7 15.0 248 444-711 16-269 (316)
87 cd05084 PTKc_Fes Catalytic dom 100.0 2.3E-32 5E-37 279.8 15.5 242 446-708 6-251 (252)
88 cd05618 STKc_aPKC_iota Catalyt 100.0 6.2E-32 1.4E-36 287.8 19.3 245 446-706 6-262 (329)
89 cd05060 PTKc_Syk_like Catalyti 100.0 3.4E-32 7.3E-37 279.5 16.6 245 447-711 7-256 (257)
90 cd05111 PTK_HER3 Pseudokinase 100.0 3.3E-32 7.2E-37 283.2 16.7 249 444-712 16-270 (279)
91 KOG0599 Phosphorylase kinase g 100.0 2.4E-32 5.3E-37 260.0 14.2 204 479-706 67-283 (411)
92 cd05592 STKc_nPKC_theta_delta 100.0 2.2E-32 4.7E-37 289.6 15.4 236 446-705 6-247 (316)
93 cd05608 STKc_GRK1 Catalytic do 100.0 2.3E-32 5.1E-37 284.5 15.2 240 447-706 5-257 (280)
94 cd05035 PTKc_Axl_like Catalyti 100.0 4.4E-32 9.6E-37 281.0 17.1 247 445-710 9-272 (273)
95 cd05075 PTKc_Axl Catalytic dom 100.0 5.6E-32 1.2E-36 280.2 17.8 244 445-710 9-271 (272)
96 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.7E-32 8E-37 282.5 16.4 247 446-708 17-276 (277)
97 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1E-31 2.2E-36 280.2 19.6 240 461-711 32-282 (283)
98 cd05614 STKc_MSK2_N N-terminal 100.0 6.6E-32 1.4E-36 288.3 18.7 242 447-706 12-267 (332)
99 PHA03212 serine/threonine kina 100.0 2.4E-32 5.1E-37 296.9 15.4 243 445-706 102-376 (391)
100 cd05054 PTKc_VEGFR Catalytic d 100.0 3.8E-32 8.2E-37 290.2 16.5 251 444-712 16-335 (337)
101 cd05092 PTKc_TrkA Catalytic do 100.0 8.1E-32 1.8E-36 280.4 18.2 242 447-709 17-280 (280)
102 KOG0584 Serine/threonine prote 100.0 2.8E-33 6.1E-38 296.1 7.1 240 444-706 49-296 (632)
103 cd05055 PTKc_PDGFR Catalytic d 100.0 5.8E-32 1.3E-36 284.6 16.8 247 446-710 46-301 (302)
104 cd06650 PKc_MEK1 Catalytic dom 100.0 8.3E-32 1.8E-36 287.3 18.0 246 446-706 16-299 (333)
105 KOG4717 Serine/threonine prote 100.0 5.7E-32 1.2E-36 277.2 15.8 244 440-706 23-270 (864)
106 KOG0580 Serine/threonine prote 100.0 1.2E-32 2.7E-37 258.4 10.1 239 443-706 30-273 (281)
107 PLN00034 mitogen-activated pro 100.0 3.7E-32 7.9E-37 292.7 15.2 237 445-706 84-328 (353)
108 cd05590 STKc_nPKC_eta Catalyti 100.0 8.1E-32 1.8E-36 285.8 17.5 235 447-706 7-253 (320)
109 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.5E-32 1.4E-36 279.1 16.4 247 445-710 15-267 (268)
110 cd08228 STKc_Nek6 Catalytic do 100.0 3.8E-32 8.3E-37 280.6 14.6 242 446-710 13-265 (267)
111 cd00192 PTKc Catalytic domain 100.0 7.7E-32 1.7E-36 277.0 16.7 243 447-708 7-262 (262)
112 cd05091 PTKc_Ror2 Catalytic do 100.0 5.8E-32 1.3E-36 281.9 15.8 241 447-709 17-282 (283)
113 cd05051 PTKc_DDR Catalytic dom 100.0 1.3E-31 2.9E-36 281.1 18.5 231 461-709 45-296 (296)
114 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7.1E-32 1.5E-36 281.4 16.3 255 446-710 15-283 (284)
115 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.8E-32 3.8E-37 295.0 12.1 241 445-706 11-285 (350)
116 cd08529 STKc_FA2-like Catalyti 100.0 5.4E-32 1.2E-36 277.5 15.0 235 447-706 12-253 (256)
117 cd05065 PTKc_EphR_B Catalytic 100.0 7.4E-32 1.6E-36 278.9 16.2 247 445-710 14-268 (269)
118 KOG2345 Serine/threonine prote 100.0 2E-32 4.4E-37 258.0 10.8 236 462-711 46-301 (302)
119 KOG4279 Serine/threonine prote 100.0 7E-33 1.5E-37 292.5 8.3 244 443-705 583-831 (1226)
120 cd05107 PTKc_PDGFR_beta Cataly 100.0 1E-31 2.2E-36 292.0 17.7 247 444-711 46-400 (401)
121 cd05059 PTKc_Tec_like Catalyti 100.0 1.4E-31 3E-36 274.8 17.8 239 447-708 16-256 (256)
122 cd05045 PTKc_RET Catalytic dom 100.0 5.1E-32 1.1E-36 283.5 14.8 247 446-711 11-287 (290)
123 cd05053 PTKc_FGFR Catalytic do 100.0 1.9E-31 4.2E-36 279.5 18.9 243 447-711 24-292 (293)
124 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.7E-32 1E-36 280.5 13.9 245 446-708 6-268 (269)
125 cd05066 PTKc_EphR_A Catalytic 100.0 9.2E-32 2E-36 277.9 16.1 246 446-710 15-266 (267)
126 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.1E-31 2.3E-36 275.8 16.5 225 463-708 31-259 (259)
127 cd05097 PTKc_DDR_like Catalyti 100.0 1.3E-31 2.9E-36 281.0 17.5 232 459-708 41-294 (295)
128 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.1E-31 4.5E-36 283.6 19.2 242 447-706 7-260 (327)
129 cd05570 STKc_PKC Catalytic dom 100.0 1.3E-31 2.8E-36 284.1 17.5 236 447-706 7-252 (318)
130 cd05058 PTKc_Met_Ron Catalytic 100.0 9.7E-32 2.1E-36 276.8 15.9 246 446-711 6-260 (262)
131 cd05109 PTKc_HER2 Catalytic do 100.0 9.1E-32 2E-36 279.9 15.9 250 444-713 16-271 (279)
132 cd08229 STKc_Nek7 Catalytic do 100.0 7.1E-32 1.5E-36 278.7 14.9 244 447-710 14-265 (267)
133 cd05071 PTKc_Src Catalytic dom 100.0 1.3E-31 2.7E-36 276.1 16.7 240 445-710 16-260 (262)
134 cd05620 STKc_nPKC_delta Cataly 100.0 1.7E-31 3.6E-36 282.9 18.0 236 447-705 7-247 (316)
135 cd05085 PTKc_Fer Catalytic dom 100.0 3.1E-31 6.8E-36 271.0 19.2 241 447-709 7-250 (250)
136 cd06625 STKc_MEKK3_like Cataly 100.0 2E-31 4.4E-36 274.5 17.9 240 447-706 14-260 (263)
137 cd07859 STKc_TDY_MAPK_plant Ca 100.0 9.2E-32 2E-36 288.0 15.9 248 446-706 11-290 (338)
138 cd05032 PTKc_InsR_like Catalyt 100.0 1.1E-31 2.5E-36 278.7 16.1 245 446-709 17-277 (277)
139 KOG0199 ACK and related non-re 100.0 3.9E-32 8.5E-37 287.7 12.3 241 446-706 121-368 (1039)
140 cd05619 STKc_nPKC_theta Cataly 100.0 2.6E-31 5.6E-36 281.3 18.2 237 446-705 6-247 (316)
141 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-31 2.8E-36 278.3 15.5 237 447-705 5-249 (277)
142 cd05056 PTKc_FAK Catalytic dom 100.0 1.1E-31 2.3E-36 277.9 14.7 247 445-711 16-266 (270)
143 KOG0658 Glycogen synthase kina 100.0 2.7E-32 5.8E-37 272.3 9.7 244 445-706 34-306 (364)
144 PHA03207 serine/threonine kina 100.0 1.1E-31 2.5E-36 292.7 15.6 246 445-706 102-375 (392)
145 cd05069 PTKc_Yes Catalytic dom 100.0 2E-31 4.3E-36 274.3 16.5 240 446-709 17-259 (260)
146 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.2E-31 4.7E-36 282.0 17.1 245 445-711 22-294 (314)
147 cd05575 STKc_SGK Catalytic dom 100.0 1.1E-31 2.4E-36 285.3 14.6 232 446-701 6-242 (323)
148 cd05604 STKc_SGK3 Catalytic do 100.0 7.1E-32 1.5E-36 287.0 13.1 232 446-701 6-242 (325)
149 cd05626 STKc_LATS2 Catalytic d 100.0 1.5E-31 3.2E-36 290.9 15.7 243 444-706 10-305 (381)
150 cd05596 STKc_ROCK Catalytic do 100.0 2.9E-31 6.4E-36 287.0 17.9 241 445-706 53-304 (370)
151 cd06646 STKc_MAP4K5 Catalytic 100.0 1.5E-31 3.2E-36 276.3 15.0 245 445-707 19-266 (267)
152 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.4E-31 5.3E-36 280.3 16.9 248 446-714 26-300 (304)
153 cd05095 PTKc_DDR2 Catalytic do 100.0 2.9E-31 6.3E-36 278.6 17.2 236 460-709 44-296 (296)
154 cd05050 PTKc_Musk Catalytic do 100.0 2E-31 4.3E-36 278.6 15.9 242 446-709 16-288 (288)
155 cd05601 STKc_CRIK Catalytic do 100.0 3.9E-32 8.5E-37 289.8 10.6 240 446-706 12-263 (330)
156 cd05589 STKc_PKN Catalytic dom 100.0 4.9E-31 1.1E-35 280.5 18.8 235 447-706 11-257 (324)
157 cd05039 PTKc_Csk_like Catalyti 100.0 3.9E-31 8.6E-36 271.3 17.5 236 447-710 18-256 (256)
158 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.7E-31 1.5E-35 270.3 18.9 240 446-709 17-259 (260)
159 cd07868 STKc_CDK8 Catalytic do 100.0 4.2E-31 9E-36 280.3 17.9 255 443-706 9-314 (317)
160 cd05042 PTKc_Aatyk Catalytic d 100.0 8.8E-32 1.9E-36 278.4 12.4 245 446-708 6-268 (269)
161 cd05044 PTKc_c-ros Catalytic d 100.0 2.5E-31 5.5E-36 274.8 15.6 234 462-709 26-269 (269)
162 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.2E-31 9E-36 271.9 17.1 241 445-709 16-259 (260)
163 cd05046 PTK_CCK4 Pseudokinase 100.0 5.5E-31 1.2E-35 273.3 18.1 245 447-709 17-275 (275)
164 cd06624 STKc_ASK Catalytic dom 100.0 6.1E-31 1.3E-35 271.9 18.4 242 445-706 18-265 (268)
165 cd06654 STKc_PAK1 Catalytic do 100.0 3.9E-31 8.5E-36 277.5 17.1 236 446-706 31-270 (296)
166 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.9E-31 1.7E-35 273.6 19.3 254 447-710 16-283 (284)
167 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3E-31 6.4E-36 277.4 16.0 247 446-706 16-285 (288)
168 cd06628 STKc_MAPKKK_Byr2_like 100.0 6.1E-31 1.3E-35 271.7 18.2 237 447-706 12-264 (267)
169 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.7E-31 5.8E-36 283.8 16.0 249 444-713 21-296 (334)
170 KOG0660 Mitogen-activated prot 100.0 1.2E-31 2.5E-36 267.3 12.2 251 443-706 30-310 (359)
171 cd05598 STKc_LATS Catalytic do 100.0 7.4E-32 1.6E-36 293.0 11.8 241 445-706 11-301 (376)
172 cd07862 STKc_CDK6 Catalytic do 100.0 3.8E-31 8.2E-36 276.8 16.6 248 445-706 11-287 (290)
173 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.6E-31 3.5E-36 282.1 13.9 247 445-712 28-301 (307)
174 cd05603 STKc_SGK2 Catalytic do 100.0 1.6E-31 3.5E-36 283.9 13.9 231 447-701 7-242 (321)
175 cd06643 STKc_SLK Catalytic dom 100.0 5.9E-31 1.3E-35 274.2 17.9 224 462-707 30-263 (282)
176 cd07869 STKc_PFTAIRE1 Catalyti 100.0 7.6E-31 1.6E-35 276.4 18.8 247 446-706 16-288 (303)
177 PTZ00283 serine/threonine prot 100.0 2.2E-31 4.9E-36 297.3 15.6 239 445-706 42-297 (496)
178 cd05587 STKc_cPKC Catalytic do 100.0 5.4E-31 1.2E-35 280.2 17.8 238 446-706 11-257 (324)
179 cd05599 STKc_NDR_like Catalyti 100.0 3.2E-31 6.8E-36 286.8 16.0 240 446-706 12-296 (364)
180 cd05628 STKc_NDR1 Catalytic do 100.0 4.7E-31 1E-35 285.1 17.2 241 446-706 12-293 (363)
181 cd05043 PTK_Ryk Pseudokinase d 100.0 4.2E-31 9.2E-36 275.0 16.3 248 445-711 16-277 (280)
182 cd05605 STKc_GRK4_like Catalyt 100.0 2.7E-31 6E-36 277.1 14.9 239 446-706 11-261 (285)
183 cd07853 STKc_NLK Catalytic dom 100.0 1.6E-31 3.4E-36 289.9 13.4 249 445-706 10-288 (372)
184 smart00219 TyrKc Tyrosine kina 100.0 5.5E-31 1.2E-35 270.2 16.7 243 446-707 10-258 (258)
185 cd05616 STKc_cPKC_beta Catalyt 100.0 8.5E-31 1.8E-35 278.5 18.4 238 446-706 11-257 (323)
186 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.3E-31 9.3E-36 275.3 15.7 255 446-710 15-283 (284)
187 cd05602 STKc_SGK1 Catalytic do 100.0 2.8E-31 6E-36 282.5 14.6 234 446-703 6-244 (325)
188 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.7E-31 1.4E-35 271.2 16.9 244 446-711 13-266 (267)
189 cd05061 PTKc_InsR Catalytic do 100.0 1.1E-30 2.3E-35 273.2 18.5 248 446-714 17-282 (288)
190 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.5E-31 9.8E-36 282.9 15.9 248 444-712 16-341 (343)
191 cd05621 STKc_ROCK2 Catalytic d 100.0 3.7E-31 8E-36 285.9 15.2 239 444-706 52-304 (370)
192 cd05629 STKc_NDR_like_fungal C 100.0 2.1E-31 4.6E-36 289.4 13.4 241 445-706 11-305 (377)
193 cd08221 STKc_Nek9 Catalytic do 100.0 8.2E-31 1.8E-35 268.9 16.9 235 448-707 13-254 (256)
194 cd06645 STKc_MAP4K3 Catalytic 100.0 6E-31 1.3E-35 271.8 15.8 239 448-706 22-265 (267)
195 cd05082 PTKc_Csk Catalytic dom 100.0 1.4E-30 3.1E-35 267.2 18.6 222 462-710 29-256 (256)
196 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.1E-31 8.9E-36 273.3 14.5 245 446-708 6-267 (268)
197 PHA03211 serine/threonine kina 100.0 3.9E-31 8.5E-36 290.8 15.0 242 446-706 180-455 (461)
198 cd05110 PTKc_HER4 Catalytic do 100.0 4.4E-31 9.5E-36 278.2 14.7 248 444-711 16-269 (303)
199 cd05034 PTKc_Src_like Catalyti 100.0 2.5E-30 5.4E-35 266.2 20.0 239 446-709 17-260 (261)
200 cd06658 STKc_PAK5 Catalytic do 100.0 5.9E-31 1.3E-35 275.6 15.6 224 462-706 47-272 (292)
201 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.9E-30 4.1E-35 270.7 19.1 236 462-709 30-269 (284)
202 cd06615 PKc_MEK Catalytic doma 100.0 1.3E-30 2.9E-35 275.2 18.1 247 447-707 13-288 (308)
203 cd05057 PTKc_EGFR_like Catalyt 100.0 8E-31 1.7E-35 272.8 16.2 243 446-711 18-269 (279)
204 cd06655 STKc_PAK2 Catalytic do 100.0 9.6E-31 2.1E-35 274.6 16.7 235 447-706 31-269 (296)
205 cd05586 STKc_Sck1_like Catalyt 100.0 2.1E-31 4.5E-36 284.2 11.6 236 446-706 4-253 (330)
206 cd05625 STKc_LATS1 Catalytic d 100.0 6.2E-31 1.3E-35 286.3 15.4 240 446-706 12-305 (382)
207 cd05112 PTKc_Itk Catalytic dom 100.0 2.8E-30 6.2E-35 264.9 19.5 237 447-708 16-256 (256)
208 cd05615 STKc_cPKC_alpha Cataly 100.0 1.7E-30 3.7E-35 276.0 18.4 238 446-706 11-257 (323)
209 cd06659 STKc_PAK6 Catalytic do 100.0 3.6E-31 7.8E-36 277.9 13.0 240 445-706 31-271 (297)
210 cd07867 STKc_CDC2L6 Catalytic 100.0 1.2E-30 2.7E-35 276.6 17.2 255 443-706 9-314 (317)
211 cd05041 PTKc_Fes_like Catalyti 100.0 2.3E-30 5E-35 264.8 18.6 241 447-709 7-251 (251)
212 cd06619 PKc_MKK5 Catalytic dom 100.0 1.7E-30 3.7E-35 270.3 17.7 237 447-707 13-254 (279)
213 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.7E-30 3.8E-35 269.9 17.5 236 448-706 17-253 (277)
214 cd06613 STKc_MAP4K3_like Catal 100.0 3.6E-30 7.9E-35 264.9 19.7 239 448-706 16-260 (262)
215 KOG0663 Protein kinase PITSLRE 100.0 8E-31 1.7E-35 257.0 13.8 241 444-706 85-361 (419)
216 cd06631 STKc_YSK4 Catalytic do 100.0 5.5E-31 1.2E-35 271.7 13.4 240 446-706 11-262 (265)
217 cd08223 STKc_Nek4 Catalytic do 100.0 1.6E-30 3.5E-35 266.9 16.8 236 447-706 12-254 (257)
218 cd06611 STKc_SLK_like Catalyti 100.0 5.2E-31 1.1E-35 274.3 13.2 235 447-706 17-262 (280)
219 cd08220 STKc_Nek8 Catalytic do 100.0 1.4E-30 2.9E-35 267.2 16.0 236 447-706 12-253 (256)
220 KOG0032 Ca2+/calmodulin-depend 100.0 1.2E-30 2.6E-35 277.1 16.0 239 445-706 45-293 (382)
221 cd06612 STKc_MST1_2 Catalytic 100.0 1.2E-30 2.6E-35 267.6 15.5 237 448-706 16-253 (256)
222 cd05073 PTKc_Hck Catalytic dom 100.0 3.5E-30 7.5E-35 265.0 18.8 241 445-709 16-259 (260)
223 PF00069 Pkinase: Protein kina 100.0 2.6E-31 5.6E-36 273.1 10.3 243 447-706 11-257 (260)
224 cd06630 STKc_MEKK1 Catalytic d 100.0 2.3E-30 5.1E-35 267.4 17.2 244 447-706 12-264 (268)
225 cd05622 STKc_ROCK1 Catalytic d 100.0 8.7E-31 1.9E-35 283.3 14.6 239 445-707 53-305 (371)
226 cd08227 PK_STRAD_alpha Pseudok 100.0 1.2E-30 2.5E-35 278.1 15.2 247 448-706 13-307 (327)
227 KOG2052 Activin A type IB rece 100.0 1.1E-30 2.3E-35 265.3 13.9 248 447-712 223-505 (513)
228 cd06609 STKc_MST3_like Catalyt 100.0 3.3E-30 7.2E-35 267.4 18.1 237 447-706 13-251 (274)
229 PTZ00266 NIMA-related protein 100.0 1.2E-30 2.5E-35 300.1 16.0 247 445-705 23-294 (1021)
230 KOG0605 NDR and related serine 100.0 4.5E-31 9.8E-36 274.6 11.4 245 443-706 149-445 (550)
231 cd06626 STKc_MEKK4 Catalytic d 100.0 2.1E-30 4.7E-35 267.0 16.4 240 447-706 12-261 (264)
232 KOG0694 Serine/threonine prote 100.0 6.8E-31 1.5E-35 280.7 13.0 229 446-700 379-613 (694)
233 cd05632 STKc_GRK5 Catalytic do 100.0 1.5E-30 3.3E-35 271.5 15.4 239 446-706 11-261 (285)
234 cd06637 STKc_TNIK Catalytic do 100.0 3.1E-30 6.7E-35 267.2 17.2 239 446-706 17-269 (272)
235 cd08219 STKc_Nek3 Catalytic do 100.0 2.8E-30 6.1E-35 264.8 16.8 235 448-706 13-252 (255)
236 PRK13184 pknD serine/threonine 100.0 8.8E-31 1.9E-35 300.0 14.3 248 445-711 12-291 (932)
237 cd06651 STKc_MEKK3 Catalytic d 100.0 1.5E-30 3.2E-35 268.8 14.6 236 447-706 14-261 (266)
238 cd08218 STKc_Nek1 Catalytic do 100.0 2.7E-30 5.8E-35 265.1 16.2 236 447-706 12-253 (256)
239 cd05630 STKc_GRK6 Catalytic do 100.0 3.7E-30 8.1E-35 268.6 17.5 241 446-706 11-261 (285)
240 cd06656 STKc_PAK3 Catalytic do 100.0 1.9E-30 4.2E-35 272.4 15.3 239 447-706 31-269 (297)
241 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.6E-30 5.7E-35 269.7 16.1 245 448-706 14-283 (286)
242 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.6E-30 5.7E-35 267.9 15.8 247 445-710 9-272 (273)
243 cd06640 STKc_MST4 Catalytic do 100.0 6.3E-30 1.4E-34 265.8 18.7 236 448-706 17-253 (277)
244 cd06632 STKc_MEKK1_plant Catal 100.0 4.3E-30 9.4E-35 263.6 17.3 236 446-706 11-255 (258)
245 KOG0667 Dual-specificity tyros 100.0 2.1E-30 4.5E-35 277.2 15.3 189 444-648 195-391 (586)
246 cd06644 STKc_STK10_LOK Catalyt 100.0 4.3E-30 9.3E-35 269.2 17.3 236 447-706 24-269 (292)
247 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.2E-30 6.9E-35 272.4 16.2 248 445-706 16-286 (309)
248 cd08217 STKc_Nek2 Catalytic do 100.0 2.3E-30 4.9E-35 266.7 14.6 241 447-706 12-262 (265)
249 KOG0594 Protein kinase PCTAIRE 100.0 3E-30 6.6E-35 258.4 15.0 251 445-710 21-308 (323)
250 cd05597 STKc_DMPK_like Catalyt 100.0 5.7E-30 1.2E-34 273.0 18.0 238 446-706 12-266 (331)
251 cd06648 STKc_PAK_II Catalytic 100.0 5E-30 1.1E-34 267.6 17.0 234 448-706 32-269 (285)
252 cd05609 STKc_MAST Catalytic do 100.0 3.9E-30 8.5E-35 271.2 16.4 239 448-709 14-273 (305)
253 cd07876 STKc_JNK2 Catalytic do 100.0 4.2E-30 9.1E-35 277.4 16.9 245 446-707 32-316 (359)
254 cd05572 STKc_cGK_PKG Catalytic 100.0 6.6E-30 1.4E-34 263.2 17.6 235 448-705 6-251 (262)
255 cd05627 STKc_NDR2 Catalytic do 100.0 2.4E-30 5.2E-35 279.3 14.7 239 447-706 13-293 (360)
256 cd08528 STKc_Nek10 Catalytic d 100.0 9.6E-30 2.1E-34 263.1 18.5 241 447-708 12-268 (269)
257 cd06605 PKc_MAPKK Catalytic do 100.0 5.1E-30 1.1E-34 264.4 16.3 227 461-706 25-257 (265)
258 cd05623 STKc_MRCK_alpha Cataly 100.0 6.4E-30 1.4E-34 272.8 17.4 237 447-706 13-266 (332)
259 KOG1025 Epidermal growth facto 100.0 1.8E-30 4E-35 279.5 13.1 230 462-711 725-958 (1177)
260 cd05624 STKc_MRCK_beta Catalyt 100.0 5.5E-30 1.2E-34 273.2 16.8 238 446-706 12-266 (331)
261 cd07833 STKc_CDKL Catalytic do 100.0 1.4E-30 3E-35 272.1 12.0 248 447-706 13-285 (288)
262 KOG0607 MAP kinase-interacting 100.0 4.3E-30 9.3E-35 249.9 14.4 255 444-705 71-360 (463)
263 cd05580 STKc_PKA Catalytic dom 100.0 1E-29 2.3E-34 265.9 18.3 221 462-706 26-254 (290)
264 cd07875 STKc_JNK1 Catalytic do 100.0 6.7E-30 1.5E-34 276.3 17.1 245 445-706 34-318 (364)
265 cd07861 STKc_CDK1_euk Catalyti 100.0 6.2E-30 1.3E-34 266.8 16.1 245 447-706 12-282 (285)
266 cd06629 STKc_MAPKKK_Bck1_like 100.0 1E-29 2.3E-34 263.3 17.6 240 447-706 13-269 (272)
267 PHA03209 serine/threonine kina 100.0 2.4E-30 5.1E-35 278.8 13.0 180 446-646 77-257 (357)
268 cd05083 PTKc_Chk Catalytic dom 100.0 1.6E-29 3.4E-34 259.2 18.4 222 462-709 29-253 (254)
269 cd07874 STKc_JNK3 Catalytic do 100.0 5E-30 1.1E-34 276.4 15.4 245 445-706 27-311 (355)
270 cd06652 STKc_MEKK2 Catalytic d 100.0 6.9E-30 1.5E-34 263.6 15.3 236 447-706 14-261 (265)
271 cd07863 STKc_CDK4 Catalytic do 100.0 8.4E-30 1.8E-34 266.3 16.1 247 445-706 10-285 (288)
272 cd07832 STKc_CCRK Catalytic do 100.0 1.3E-29 2.7E-34 264.6 17.3 247 447-706 12-282 (286)
273 KOG0574 STE20-like serine/thre 100.0 5.9E-31 1.3E-35 253.5 6.7 242 443-706 41-283 (502)
274 cd08216 PK_STRAD Pseudokinase 100.0 1.3E-29 2.9E-34 268.3 17.7 236 461-706 24-295 (314)
275 cd06638 STKc_myosinIIIA Cataly 100.0 4.9E-30 1.1E-34 267.8 14.1 242 445-707 28-284 (286)
276 cd06623 PKc_MAPKK_plant_like C 100.0 1.6E-29 3.4E-34 260.5 17.4 239 447-706 13-256 (264)
277 cd05122 PKc_STE Catalytic doma 100.0 2.5E-29 5.4E-34 256.6 18.8 236 448-706 13-251 (253)
278 cd08225 STKc_Nek5 Catalytic do 100.0 5.3E-30 1.2E-34 262.9 13.8 237 447-706 12-254 (257)
279 cd07841 STKc_CDK7 Catalytic do 100.0 3.4E-29 7.5E-34 263.1 19.8 246 447-706 12-282 (298)
280 cd06639 STKc_myosinIIIB Cataly 100.0 1.1E-29 2.4E-34 265.9 15.8 236 446-706 33-287 (291)
281 cd05579 STKc_MAST_like Catalyt 100.0 1.4E-29 3.1E-34 260.7 16.4 227 462-709 18-257 (265)
282 cd07839 STKc_CDK5 Catalytic do 100.0 5.2E-30 1.1E-34 267.3 13.2 246 447-706 12-281 (284)
283 cd06614 STKc_PAK Catalytic dom 100.0 1.7E-29 3.8E-34 263.7 17.0 222 462-706 44-270 (286)
284 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.3E-29 4.9E-34 263.0 17.9 240 449-706 15-266 (287)
285 cd05578 STKc_Yank1 Catalytic d 100.0 6.6E-30 1.4E-34 262.6 13.6 236 447-705 12-254 (258)
286 cd07846 STKc_CDKL2_3 Catalytic 100.0 5.9E-30 1.3E-34 267.1 13.4 247 447-706 13-283 (286)
287 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.2E-29 4.7E-34 263.0 17.4 237 448-706 14-262 (286)
288 PTZ00036 glycogen synthase kin 100.0 1.4E-29 3.1E-34 279.5 16.9 243 446-706 77-351 (440)
289 KOG0577 Serine/threonine prote 100.0 4.2E-30 9.1E-35 267.5 11.6 232 447-707 38-279 (948)
290 cd07860 STKc_CDK2_3 Catalytic 100.0 1.4E-29 3.1E-34 264.0 15.6 245 447-706 12-281 (284)
291 cd08226 PK_STRAD_beta Pseudoki 100.0 1.7E-29 3.6E-34 269.3 16.3 249 446-706 11-308 (328)
292 PTZ00284 protein kinase; Provi 100.0 1.3E-29 2.8E-34 282.9 15.8 252 444-706 138-438 (467)
293 cd07835 STKc_CDK1_like Catalyt 100.0 1.7E-29 3.8E-34 263.2 15.7 244 448-706 12-280 (283)
294 KOG0200 Fibroblast/platelet-de 100.0 3E-29 6.4E-34 285.4 18.9 228 462-710 328-579 (609)
295 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.1E-29 8.8E-34 263.0 18.6 246 447-706 18-286 (301)
296 cd05574 STKc_phototropin_like 100.0 5.8E-29 1.3E-33 263.7 19.8 237 447-706 13-289 (316)
297 cd06610 STKc_OSR1_SPAK Catalyt 100.0 8.6E-30 1.9E-34 262.9 12.7 239 447-706 13-264 (267)
298 cd05583 STKc_MSK_N N-terminal 100.0 1.8E-29 3.9E-34 263.9 15.3 248 446-710 11-267 (288)
299 cd06647 STKc_PAK_I Catalytic d 100.0 2E-29 4.4E-34 264.1 15.6 238 448-706 32-269 (293)
300 KOG4645 MAPKKK (MAP kinase kin 100.0 6.1E-31 1.3E-35 296.6 4.3 244 444-707 1244-1495(1509)
301 cd06608 STKc_myosinIII_like Ca 100.0 2.2E-29 4.9E-34 260.8 15.7 238 448-706 19-272 (275)
302 cd05577 STKc_GRK Catalytic dom 100.0 2E-29 4.2E-34 262.0 14.9 238 447-706 5-254 (277)
303 cd08530 STKc_CNK2-like Catalyt 100.0 1.5E-29 3.3E-34 259.3 13.8 236 447-706 12-253 (256)
304 cd05633 STKc_GRK3 Catalytic do 100.0 2.4E-29 5.1E-34 261.7 15.3 236 447-706 6-255 (279)
305 cd06917 STKc_NAK1_like Catalyt 100.0 5.6E-29 1.2E-33 258.5 18.0 238 446-706 12-255 (277)
306 cd06627 STKc_Cdc7_like Catalyt 100.0 6.2E-29 1.3E-33 254.3 18.1 237 448-706 13-251 (254)
307 cd06606 STKc_MAPKKK Catalytic 100.0 1.9E-29 4.1E-34 258.6 14.3 238 447-706 12-257 (260)
308 cd06657 STKc_PAK4 Catalytic do 100.0 4.3E-29 9.3E-34 261.4 17.1 226 461-706 44-270 (292)
309 cd06635 STKc_TAO1 Catalytic do 100.0 9.2E-29 2E-33 262.2 19.7 239 447-714 37-285 (317)
310 cd06641 STKc_MST3 Catalytic do 100.0 6.9E-29 1.5E-33 257.9 18.4 237 447-706 16-253 (277)
311 cd05611 STKc_Rim15_like Cataly 100.0 1.2E-29 2.6E-34 260.9 12.5 238 446-708 7-250 (260)
312 cd06607 STKc_TAO Catalytic dom 100.0 5.1E-29 1.1E-33 263.0 17.4 232 447-707 27-268 (307)
313 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.3E-29 5E-34 270.0 14.5 244 445-706 25-298 (343)
314 cd05613 STKc_MSK1_N N-terminal 100.0 4.8E-29 1E-33 260.9 15.7 243 447-706 12-268 (290)
315 KOG0610 Putative serine/threon 100.0 6.4E-29 1.4E-33 250.7 15.6 227 460-706 100-392 (459)
316 cd06636 STKc_MAP4K4_6 Catalyti 100.0 6.2E-29 1.3E-33 259.0 16.0 239 446-706 27-279 (282)
317 cd07843 STKc_CDC2L1 Catalytic 100.0 8.6E-29 1.9E-33 259.4 17.0 246 447-706 17-290 (293)
318 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2E-28 4.3E-33 256.4 19.6 244 448-706 18-288 (291)
319 cd07844 STKc_PCTAIRE_like Cata 100.0 1.9E-28 4.2E-33 256.4 19.4 246 447-706 17-288 (291)
320 PHA03390 pk1 serine/threonine- 100.0 1.5E-28 3.2E-33 253.9 18.0 234 445-706 26-262 (267)
321 cd08215 STKc_Nek Catalytic dom 100.0 6.4E-29 1.4E-33 254.6 14.7 236 447-706 12-255 (258)
322 cd07842 STKc_CDK8_like Catalyt 100.0 7.7E-29 1.7E-33 262.7 15.5 253 447-706 12-313 (316)
323 cd06653 STKc_MEKK3_like_1 Cata 100.0 8.4E-29 1.8E-33 255.3 15.3 237 446-706 13-261 (264)
324 KOG0596 Dual specificity; seri 100.0 5.3E-29 1.2E-33 258.7 13.6 224 461-706 384-627 (677)
325 KOG0579 Ste20-like serine/thre 100.0 2.4E-29 5.2E-34 263.3 11.0 240 443-706 40-289 (1187)
326 PLN00009 cyclin-dependent kina 100.0 1E-28 2.2E-33 258.9 15.9 246 448-706 15-284 (294)
327 cd05606 STKc_beta_ARK Catalyti 100.0 2.3E-28 5.1E-33 254.1 18.3 236 447-706 6-255 (278)
328 KOG0586 Serine/threonine prote 100.0 1.8E-29 3.8E-34 267.2 9.6 239 444-706 65-306 (596)
329 KOG0983 Mitogen-activated prot 100.0 2.5E-29 5.5E-34 239.8 9.7 227 460-706 115-349 (391)
330 cd07840 STKc_CDK9_like Catalyt 100.0 1.2E-28 2.7E-33 257.1 15.9 247 447-706 11-284 (287)
331 cd07837 STKc_CdkB_plant Cataly 100.0 1.3E-28 2.8E-33 258.3 16.0 247 447-706 13-291 (295)
332 cd07850 STKc_JNK Catalytic dom 100.0 2.1E-28 4.6E-33 263.5 17.0 244 446-706 27-311 (353)
333 cd05581 STKc_PDK1 Catalytic do 100.0 5.9E-29 1.3E-33 258.5 12.2 239 446-706 12-277 (280)
334 KOG1024 Receptor-like protein 100.0 1.7E-28 3.7E-33 244.7 14.5 229 463-710 315-555 (563)
335 cd07865 STKc_CDK9 Catalytic do 100.0 1.1E-28 2.3E-33 260.8 14.0 240 446-706 23-307 (310)
336 cd07864 STKc_CDK12 Catalytic d 100.0 2.4E-28 5.1E-33 257.2 16.3 239 447-706 19-299 (302)
337 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.8E-28 3.9E-33 255.5 15.1 237 446-706 12-261 (283)
338 cd07845 STKc_CDK10 Catalytic d 100.0 2.4E-28 5.2E-33 258.1 16.0 248 445-707 17-291 (309)
339 cd05576 STKc_RPK118_like Catal 100.0 1.4E-28 3E-33 249.4 13.5 206 462-700 18-223 (237)
340 PTZ00024 cyclin-dependent prot 100.0 1.5E-28 3.3E-33 262.8 14.5 242 445-707 19-314 (335)
341 PHA02882 putative serine/threo 100.0 2.5E-28 5.5E-33 255.9 15.9 213 483-708 72-294 (294)
342 cd05123 STKc_AGC Catalytic dom 100.0 3E-28 6.4E-33 248.8 15.8 232 448-702 6-240 (250)
343 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-28 2.4E-33 263.7 13.0 248 447-707 17-295 (334)
344 KOG0603 Ribosomal protein S6 k 100.0 6.3E-29 1.4E-33 264.4 10.9 215 462-706 347-563 (612)
345 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.5E-28 3.2E-33 263.0 13.9 251 447-711 17-298 (337)
346 cd06634 STKc_TAO2 Catalytic do 100.0 6.4E-28 1.4E-32 254.7 18.3 222 462-710 40-271 (308)
347 KOG1151 Tousled-like protein k 100.0 1.7E-28 3.7E-33 247.6 13.1 254 443-705 471-740 (775)
348 cd06633 STKc_TAO3 Catalytic do 100.0 3.5E-28 7.7E-33 257.2 16.2 232 446-706 32-273 (313)
349 KOG0666 Cyclin C-dependent kin 100.0 3.7E-29 8E-34 242.7 7.8 256 443-707 32-338 (438)
350 cd07836 STKc_Pho85 Catalytic d 100.0 7.9E-28 1.7E-32 250.8 18.3 246 447-706 12-281 (284)
351 cd07849 STKc_ERK1_2_like Catal 100.0 8.2E-28 1.8E-32 257.1 18.9 251 447-711 17-299 (336)
352 cd06616 PKc_MKK4 Catalytic dom 100.0 8.6E-29 1.9E-33 258.7 10.8 237 446-706 15-267 (288)
353 cd07831 STKc_MOK Catalytic dom 100.0 1.4E-27 3.1E-32 248.6 19.8 244 447-706 11-279 (282)
354 cd06618 PKc_MKK7 Catalytic dom 100.0 3.3E-28 7.2E-33 255.4 15.0 236 447-707 27-274 (296)
355 cd07852 STKc_MAPK15 Catalytic 100.0 4.7E-28 1E-32 259.1 16.4 245 448-706 20-295 (337)
356 KOG0604 MAP kinase-activated p 100.0 2.6E-28 5.6E-33 235.8 12.7 210 480-706 100-322 (400)
357 cd05118 STKc_CMGC Catalytic do 100.0 8.1E-29 1.8E-33 258.0 9.8 246 447-706 11-280 (283)
358 cd07834 STKc_MAPK Catalytic do 100.0 8.5E-28 1.8E-32 256.4 17.8 252 447-711 12-296 (330)
359 cd07838 STKc_CDK4_6_like Catal 100.0 1.1E-27 2.3E-32 250.1 17.9 245 447-706 11-284 (287)
360 PHA03210 serine/threonine kina 100.0 8E-28 1.7E-32 269.6 17.9 219 477-706 206-454 (501)
361 smart00220 S_TKc Serine/Threon 100.0 7.5E-28 1.6E-32 243.9 15.6 222 461-705 13-240 (244)
362 cd07829 STKc_CDK_like Catalyti 100.0 8.6E-28 1.9E-32 250.1 16.2 246 447-706 11-279 (282)
363 KOG1006 Mitogen-activated prot 100.0 3.7E-29 8.1E-34 237.9 4.8 238 444-706 73-327 (361)
364 cd08222 STKc_Nek11 Catalytic d 100.0 4.1E-28 8.9E-33 249.5 13.0 207 477-706 45-257 (260)
365 cd07857 STKc_MPK1 Catalytic do 100.0 1.3E-27 2.7E-32 255.2 17.0 249 447-706 12-292 (332)
366 cd07830 STKc_MAK_like Catalyti 99.9 3.2E-27 7E-32 246.1 18.7 245 447-706 11-280 (283)
367 cd07866 STKc_BUR1 Catalytic do 99.9 1.1E-27 2.4E-32 253.2 15.2 248 446-706 19-308 (311)
368 cd07879 STKc_p38delta_MAPK13 C 99.9 1.1E-27 2.5E-32 256.6 15.5 249 446-713 26-306 (342)
369 KOG1035 eIF-2alpha kinase GCN2 99.9 4.1E-28 8.9E-33 272.8 10.9 174 509-706 671-871 (1351)
370 cd07854 STKc_MAPK4_6 Catalytic 99.9 3.4E-27 7.3E-32 252.9 16.9 247 447-706 17-300 (342)
371 KOG0986 G protein-coupled rece 99.9 1.1E-27 2.3E-32 243.5 11.9 239 446-706 196-446 (591)
372 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 3.9E-27 8.5E-32 250.8 15.1 243 446-706 21-288 (328)
373 cd07877 STKc_p38alpha_MAPK14 C 99.9 2E-26 4.3E-31 247.3 19.6 243 447-707 29-301 (345)
374 cd07880 STKc_p38gamma_MAPK12 C 99.9 9.4E-27 2E-31 249.5 16.5 242 447-706 27-298 (343)
375 cd07851 STKc_p38 Catalytic dom 99.9 2.8E-27 6E-32 253.7 12.2 243 446-706 26-298 (343)
376 KOG4250 TANK binding protein k 99.9 1.8E-27 3.9E-32 255.2 10.4 259 443-711 21-311 (732)
377 KOG0671 LAMMER dual specificit 99.9 2.9E-27 6.3E-32 236.6 8.0 236 462-706 114-406 (415)
378 cd05610 STKc_MASTL Catalytic d 99.9 2.5E-26 5.4E-31 265.5 17.0 135 446-592 15-152 (669)
379 KOG0690 Serine/threonine prote 99.9 6E-27 1.3E-31 228.3 9.6 224 461-705 192-423 (516)
380 KOG1027 Serine/threonine prote 99.9 1.6E-27 3.4E-32 259.1 5.7 228 461-706 532-767 (903)
381 KOG0665 Jun-N-terminal kinase 99.9 1.1E-26 2.4E-31 227.2 10.8 230 462-706 41-310 (369)
382 KOG4236 Serine/threonine prote 99.9 4E-27 8.7E-32 242.3 6.6 228 462-706 589-819 (888)
383 KOG0587 Traf2- and Nck-interac 99.9 2.6E-26 5.7E-31 250.8 12.1 238 444-706 28-282 (953)
384 KOG0669 Cyclin T-dependent kin 99.9 7.2E-27 1.6E-31 220.5 5.9 251 444-707 26-316 (376)
385 KOG0984 Mitogen-activated prot 99.9 9.2E-26 2E-30 207.3 9.3 190 445-648 56-255 (282)
386 KOG0662 Cyclin-dependent kinas 99.9 4.5E-25 9.7E-30 198.1 11.0 238 444-706 11-283 (292)
387 PLN03225 Serine/threonine-prot 99.9 2.1E-25 4.6E-30 251.4 11.2 248 444-706 141-450 (566)
388 KOG0696 Serine/threonine prote 99.9 1.6E-25 3.5E-30 224.6 8.5 216 461-698 373-593 (683)
389 KOG0614 cGMP-dependent protein 99.9 8.5E-26 1.8E-30 232.1 6.4 223 465-707 448-678 (732)
390 PLN03224 probable serine/threo 99.9 2.3E-24 5E-29 236.8 17.2 236 461-706 185-500 (507)
391 KOG0612 Rho-associated, coiled 99.9 3.3E-25 7.2E-30 247.6 10.5 245 444-707 73-339 (1317)
392 KOG0695 Serine/threonine prote 99.9 1.5E-24 3.4E-29 212.1 12.5 237 445-698 260-502 (593)
393 KOG0664 Nemo-like MAPK-related 99.9 8.2E-26 1.8E-30 215.5 3.2 250 446-708 64-345 (449)
394 PLN00181 protein SPA1-RELATED; 99.9 6.7E-25 1.4E-29 259.9 10.2 203 489-706 27-265 (793)
395 cd00180 PKc Catalytic domain o 99.9 2.6E-23 5.7E-28 205.3 17.2 195 462-707 18-215 (215)
396 KOG0608 Warts/lats-like serine 99.9 3E-24 6.5E-29 225.7 8.1 179 464-652 656-878 (1034)
397 KOG1290 Serine/threonine prote 99.9 3.5E-23 7.6E-28 212.7 14.3 252 444-706 87-550 (590)
398 smart00750 KIND kinase non-cat 99.9 2.5E-23 5.5E-28 200.5 12.7 161 519-710 1-169 (176)
399 KOG0670 U4/U6-associated splic 99.9 5.2E-24 1.1E-28 219.6 7.1 242 449-706 446-746 (752)
400 KOG0576 Mitogen-activated prot 99.9 6.3E-24 1.4E-28 225.3 7.2 237 444-705 24-270 (829)
401 KOG1152 Signal transduction se 99.9 1.4E-23 3.1E-28 219.2 5.6 186 446-646 572-770 (772)
402 smart00221 STYKc Protein kinas 99.9 6E-22 1.3E-26 198.4 14.7 176 462-647 24-202 (225)
403 KOG0668 Casein kinase II, alph 99.9 2.6E-22 5.7E-27 187.2 10.7 244 444-706 47-322 (338)
404 PF00954 S_locus_glycop: S-loc 99.9 2.8E-22 6.1E-27 175.7 10.0 106 167-279 1-110 (110)
405 KOG1345 Serine/threonine kinas 99.9 2.6E-21 5.6E-26 185.1 11.5 249 439-707 13-285 (378)
406 KOG1167 Serine/threonine prote 99.8 4E-21 8.7E-26 195.4 11.5 250 443-706 44-381 (418)
407 cd00028 B_lectin Bulb-type man 99.8 1.4E-19 3.1E-24 160.5 13.6 100 33-135 3-106 (116)
408 smart00108 B_lectin Bulb-type 99.8 3.7E-19 8.1E-24 157.3 12.9 96 39-135 7-105 (114)
409 KOG0195 Integrin-linked kinase 99.8 3.8E-20 8.1E-25 176.9 5.2 217 470-711 223-447 (448)
410 KOG1023 Natriuretic peptide re 99.8 3.7E-19 8E-24 190.7 12.0 212 488-713 1-227 (484)
411 KOG0590 Checkpoint kinase and 99.8 7.6E-20 1.6E-24 205.6 2.1 213 481-705 368-584 (601)
412 PRK09188 serine/threonine prot 99.7 4.6E-18 9.9E-23 179.5 9.6 157 443-620 26-195 (365)
413 COG0515 SPS1 Serine/threonine 99.7 1.3E-16 2.8E-21 168.9 17.6 230 463-706 23-275 (384)
414 KOG1240 Protein kinase contain 99.7 8E-18 1.7E-22 188.4 7.1 227 464-710 48-295 (1431)
415 KOG1164 Casein kinase (serine/ 99.7 1.3E-16 2.8E-21 169.0 15.0 256 444-711 27-298 (322)
416 KOG4158 BRPK/PTEN-induced prot 99.7 6.3E-17 1.4E-21 162.9 10.8 200 492-707 274-511 (598)
417 KOG1033 eIF-2alpha kinase PEK/ 99.6 1.4E-16 2.9E-21 167.6 4.7 168 508-703 330-509 (516)
418 KOG0603 Ribosomal protein S6 k 99.6 3.8E-16 8.2E-21 167.4 6.7 196 480-707 42-241 (612)
419 KOG1163 Casein kinase (serine/ 99.6 2.8E-15 6.2E-20 141.7 10.8 194 444-649 24-225 (341)
420 KOG1165 Casein kinase (serine/ 99.6 4.8E-15 1E-19 146.4 10.8 196 444-649 37-240 (449)
421 PRK10359 lipopolysaccharide co 99.6 2.1E-15 4.5E-20 148.1 7.9 146 462-639 54-216 (232)
422 PF01453 B_lectin: D-mannose b 99.6 4.3E-15 9.2E-20 130.5 8.9 81 72-152 1-94 (114)
423 PRK12274 serine/threonine prot 99.6 7.1E-15 1.5E-19 141.1 10.0 180 443-647 10-209 (218)
424 cd05147 RIO1_euk RIO kinase fa 99.6 3.1E-15 6.7E-20 145.2 7.6 136 444-595 6-168 (190)
425 cd05145 RIO1_like RIO kinase f 99.6 9.1E-15 2E-19 142.4 9.4 137 444-596 6-169 (190)
426 PRK10345 hypothetical protein; 99.5 9.1E-14 2E-18 136.2 11.7 118 466-592 28-157 (210)
427 PF14531 Kinase-like: Kinase-l 99.5 4.2E-14 9E-19 143.1 6.7 224 445-697 22-288 (288)
428 KOG1266 Protein kinase [Signal 99.5 4.5E-14 9.8E-19 139.5 5.8 204 484-707 117-332 (458)
429 KOG1166 Mitotic checkpoint ser 99.3 1.7E-12 3.7E-17 149.3 9.5 193 444-645 707-903 (974)
430 PF08276 PAN_2: PAN-like domai 99.3 8.6E-13 1.9E-17 103.4 4.5 59 304-364 4-66 (66)
431 PRK14879 serine/threonine prot 99.3 6.7E-12 1.5E-16 124.6 11.1 100 479-593 44-143 (211)
432 smart00090 RIO RIO-like kinase 99.3 8.9E-12 1.9E-16 125.2 10.8 135 444-595 37-199 (237)
433 KOG0590 Checkpoint kinase and 99.3 6.1E-13 1.3E-17 150.1 1.6 227 463-705 47-285 (601)
434 TIGR03724 arch_bud32 Kae1-asso 99.3 1.1E-11 2.4E-16 121.8 10.3 97 479-593 42-138 (199)
435 KOG0606 Microtubule-associated 99.3 2.1E-12 4.5E-17 145.6 4.2 138 544-698 153-304 (1205)
436 PRK09605 bifunctional UGMP fam 99.3 1.6E-11 3.6E-16 139.0 11.1 97 479-594 381-477 (535)
437 cd01098 PAN_AP_plant Plant PAN 99.2 9.9E-12 2.1E-16 103.6 6.1 72 304-381 11-84 (84)
438 cd05120 APH_ChoK_like Aminogly 99.2 8.5E-11 1.9E-15 109.4 11.1 115 463-593 22-138 (155)
439 PRK01723 3-deoxy-D-manno-octul 99.2 6.7E-11 1.5E-15 119.1 10.9 102 478-594 84-192 (239)
440 cd05144 RIO2_C RIO kinase fami 99.2 3.2E-11 7E-16 118.4 7.4 130 444-596 24-177 (198)
441 KOG1243 Protein kinase [Genera 99.2 4.5E-10 9.8E-15 122.2 14.9 163 462-641 37-199 (690)
442 cd00129 PAN_APPLE PAN/APPLE-li 99.1 1.5E-10 3.2E-15 93.7 4.8 66 305-380 9-80 (80)
443 cd05119 RIO RIO kinase family, 99.0 2.9E-10 6.4E-15 110.5 6.9 133 445-596 7-166 (187)
444 KOG0601 Cyclin-dependent kinas 99.0 2.4E-10 5.1E-15 123.4 6.6 240 446-706 127-379 (524)
445 KOG3741 Poly(A) ribonuclease s 98.9 2.7E-08 5.8E-13 105.1 13.2 210 452-707 293-522 (655)
446 TIGR01982 UbiB 2-polyprenylphe 98.8 1.5E-08 3.2E-13 111.2 8.4 103 481-596 200-309 (437)
447 cd05151 ChoK Choline Kinase (C 98.7 4.8E-08 1E-12 93.1 8.6 113 462-593 21-136 (170)
448 cd05146 RIO3_euk RIO kinase fa 98.7 6.8E-08 1.5E-12 93.1 9.4 100 482-596 74-176 (197)
449 KOG0601 Cyclin-dependent kinas 98.7 2E-08 4.4E-13 108.6 6.4 225 461-710 290-518 (524)
450 KOG0606 Microtubule-associated 98.6 1.1E-08 2.3E-13 116.2 2.4 188 492-701 862-1084(1205)
451 COG3642 Mn2+-dependent serine/ 98.6 2.3E-07 5E-12 86.3 8.7 97 479-593 44-140 (204)
452 PRK15123 lipopolysaccharide co 98.5 5.6E-07 1.2E-11 91.8 11.6 111 480-593 74-194 (268)
453 KOG2137 Protein kinase [Signal 98.5 4.5E-08 9.7E-13 107.3 2.0 152 539-705 104-264 (700)
454 KOG3087 Serine/threonine prote 98.4 1.2E-06 2.7E-11 81.0 8.3 109 478-593 54-165 (229)
455 cd05154 ACAD10_11_like Acyl-Co 98.4 2.1E-06 4.5E-11 85.7 10.9 125 463-593 23-206 (223)
456 PRK04750 ubiB putative ubiquin 98.3 4.1E-07 8.9E-12 101.1 4.3 103 481-596 203-316 (537)
457 PF06293 Kdo: Lipopolysacchari 98.2 4.2E-06 9.1E-11 82.5 9.2 110 478-594 55-171 (206)
458 smart00473 PAN_AP divergent su 98.2 3.5E-06 7.5E-11 68.7 5.9 58 305-365 4-65 (78)
459 PF01163 RIO1: RIO1 family; I 98.1 8.1E-06 1.8E-10 78.4 7.5 100 479-595 53-157 (188)
460 COG4248 Uncharacterized protei 98.0 3.4E-05 7.3E-10 80.1 10.6 169 530-710 113-300 (637)
461 PF12260 PIP49_C: Protein-kina 98.0 8E-05 1.7E-09 71.9 12.5 102 482-594 7-112 (188)
462 PRK09902 hypothetical protein; 97.9 4.9E-05 1.1E-09 73.5 8.5 110 475-593 60-179 (216)
463 KOG0576 Mitogen-activated prot 97.8 2.3E-05 4.9E-10 85.5 5.7 182 448-646 247-431 (829)
464 smart00108 B_lectin Bulb-type 97.7 0.00019 4.2E-09 63.2 8.4 77 91-169 24-111 (114)
465 cd00028 B_lectin Bulb-type man 97.5 0.00033 7.2E-09 61.9 8.1 75 93-169 26-112 (116)
466 cd01100 APPLE_Factor_XI_like S 97.4 0.00011 2.5E-09 58.8 3.4 46 311-359 10-57 (73)
467 PF06176 WaaY: Lipopolysacchar 97.4 0.0007 1.5E-08 65.9 8.4 68 507-593 116-183 (229)
468 cd05150 APH Aminoglycoside 3'- 97.2 0.0019 4.1E-08 65.5 10.6 59 463-524 23-82 (244)
469 PF01453 B_lectin: D-mannose b 97.2 0.0029 6.4E-08 55.5 10.0 82 41-129 13-98 (114)
470 KOG1035 eIF-2alpha kinase GCN2 97.2 0.00072 1.6E-08 79.1 7.6 199 481-707 229-435 (1351)
471 COG0478 RIO-like serine/threon 97.0 0.0024 5.2E-08 63.6 7.6 98 479-595 154-253 (304)
472 TIGR02172 Fb_sc_TIGR02172 Fibr 96.9 0.0094 2E-07 59.5 11.8 54 465-520 25-80 (226)
473 PF10707 YrbL-PhoP_reg: PhoP r 96.8 0.01 2.2E-07 57.7 10.5 100 477-587 54-165 (199)
474 PLN02876 acyl-CoA dehydrogenas 96.5 0.019 4E-07 68.9 12.2 58 464-521 67-131 (822)
475 cd05155 APH_ChoK_like_1 Unchar 96.4 0.018 4E-07 57.9 9.5 46 477-522 31-82 (235)
476 PF01636 APH: Phosphotransfera 96.2 0.025 5.5E-07 56.4 9.6 59 463-523 21-84 (239)
477 COG1718 RIO1 Serine/threonine 96.0 0.025 5.5E-07 55.9 8.1 100 482-596 116-218 (268)
478 COG0661 AarF Predicted unusual 95.9 0.019 4.2E-07 63.9 7.6 103 481-596 208-317 (517)
479 KOG1235 Predicted unusual prot 95.6 0.031 6.7E-07 62.1 7.7 109 481-597 241-358 (538)
480 PRK10593 hypothetical protein; 95.5 0.13 2.8E-06 53.8 11.7 44 478-521 51-100 (297)
481 KOG1093 Predicted protein kina 95.4 0.063 1.4E-06 58.2 8.6 49 479-528 27-76 (725)
482 TIGR02721 ycfN_thiK thiamine k 95.1 0.1 2.2E-06 53.3 9.1 30 556-593 146-175 (256)
483 cd05153 HomoserineK_II Homoser 94.8 0.086 1.9E-06 55.0 7.8 120 464-593 39-205 (296)
484 cd05157 ETNK_euk Ethanolamine 94.1 0.29 6.3E-06 49.0 9.6 31 556-592 170-200 (235)
485 KOG1826 Ras GTPase activating 94.1 0.0085 1.8E-07 72.2 -1.8 156 481-645 1276-1440(2724)
486 smart00223 APPLE APPLE domain. 93.8 0.064 1.4E-06 43.4 3.3 46 311-359 7-57 (79)
487 PF07387 Seadorna_VP7: Seadorn 93.6 0.15 3.2E-06 49.5 5.7 139 464-643 87-226 (308)
488 PLN02236 choline kinase 93.5 0.51 1.1E-05 50.4 10.5 120 463-593 66-231 (344)
489 cd05152 MPH2' Macrolide 2'-Pho 93.0 0.4 8.6E-06 49.5 8.6 31 556-593 185-216 (276)
490 COG3173 Predicted aminoglycosi 92.9 0.42 9E-06 49.9 8.5 109 478-593 65-228 (321)
491 PF01633 Choline_kinase: Choli 92.8 0.46 9.9E-06 46.8 8.3 31 556-593 143-174 (211)
492 PF03881 Fructosamin_kin: Fruc 92.6 0.51 1.1E-05 48.8 8.6 57 460-519 38-97 (288)
493 PF14295 PAN_4: PAN domain; PD 92.0 0.1 2.2E-06 38.2 1.9 25 327-351 14-38 (51)
494 PRK05231 homoserine kinase; Pr 90.9 1.9 4.1E-05 45.5 11.0 32 555-593 186-217 (319)
495 PRK09550 mtnK methylthioribose 90.7 2.9 6.2E-05 45.4 12.1 55 463-519 52-116 (401)
496 PF07645 EGF_CA: Calcium-bindi 90.5 0.17 3.7E-06 35.4 1.7 32 245-277 3-35 (42)
497 PF13095 FTA2: Kinetochore Sim 90.2 0.86 1.9E-05 44.2 6.8 84 480-591 100-206 (207)
498 COG3001 Uncharacterized protei 89.6 1.2 2.7E-05 43.6 7.3 70 449-522 27-99 (286)
499 PLN02421 phosphotransferase, a 89.0 2 4.4E-05 45.5 9.3 31 557-593 183-213 (330)
500 COG5072 ALK1 Serine/threonine 88.0 1.5 3.2E-05 46.1 7.0 71 508-593 300-370 (488)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-47 Score=403.97 Aligned_cols=259 Identities=44% Similarity=0.790 Sum_probs=217.8
Q ss_pred CcccccHHHHHHHhcccC------------------CcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEE
Q 039817 442 NMKVFSYQELREATNVFD------------------GQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFC 503 (725)
Q Consensus 442 ~~~~~~~~~l~~a~~~~~------------------~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~ 503 (725)
..+.|+|.++.+||++|+ .++..||||++.....+..++|.+|++++++++|||||+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 578899999999999997 23368999998765443256799999999999999999999999
Q ss_pred EcCC-ceeeeeecccCCChhhhhccCC--CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCC
Q 039817 504 IEQN-HQLLVYELMKNGTLSAFLFRQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNN 580 (725)
Q Consensus 504 ~~~~-~~~lV~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~ 580 (725)
.+.+ +.+||||||++|+|+++|+... .++|.+|++|+.++|+||+|||+.|.++|||||||++|||||+ +
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~-------~ 213 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE-------D 213 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC-------C
Confidence 9999 5999999999999999999875 8999999999999999999999999999999999999999987 8
Q ss_pred CceEEeeccCccccCc-CCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCc
Q 039817 581 YITKIADFGLAKLLKK-DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGM 659 (725)
Q Consensus 581 ~~~kl~Dfgla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~ 659 (725)
+++||+|||+|+.... ........ .||.+|+|||++..+..+.|+|||||||+|+||+||+++.+..... ...
T Consensus 214 ~~aKlsDFGLa~~~~~~~~~~~~~~-~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~-----~~~ 287 (361)
T KOG1187|consen 214 FNAKLSDFGLAKLGPEGDTSVSTTV-MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPR-----GEL 287 (361)
T ss_pred CCEEccCccCcccCCccccceeeec-CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCc-----ccc
Confidence 9999999999976554 22211111 6999999999999999999999999999999999999887754421 123
Q ss_pred chHHHHHHHHHcC-------------CCCh-hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 039817 660 ILTDWVLYCVRTG-------------NLGA-TKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEV 713 (725)
Q Consensus 660 ~~~~~~~~~~~~~-------------~~~~-~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 713 (725)
.+.+|+...+..+ ..+. ....++..++.+|++.+|++||+|.||+++|+.+...
T Consensus 288 ~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 288 SLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred cHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 3666665555443 2222 4677899999999999999999999999999766543
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-42 Score=362.82 Aligned_cols=247 Identities=33% Similarity=0.442 Sum_probs=202.2
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCcc--HHHHHHHHHHHhccCcCCccceeeEEEcCC-ceeeeeecccCCC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDG--EKSFLREVQVIGRTHHKNLVQLLGFCIEQN-HQLLVYELMKNGT 520 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~--~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~e~~~~gs 520 (725)
...+|++++++... |. ..||||.+....... .++|.+|+.+|++++|||||+++|+|.+.. ..++|||||++|+
T Consensus 50 G~G~~g~V~~~~~~--g~-~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~Gs 126 (362)
T KOG0192|consen 50 GSGSFGTVYKGKWR--GT-DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGS 126 (362)
T ss_pred ccCCceeEEEEEeC--Cc-eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCc
Confidence 34556666644432 21 239999987543222 569999999999999999999999999988 8999999999999
Q ss_pred hhhhhcc--CCCCCHHHHHHHHHHHHHHhhhhhcccCCc-eeecCCccceEEeccCccccCCCC-ceEEeeccCccccCc
Q 039817 521 LSAFLFR--QEIPTWDKRVEIALGIARGLLYLHEECETQ-IIHCDIKPQNVLLDNNYITIDNNY-ITKIADFGLAKLLKK 596 (725)
Q Consensus 521 L~~~l~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-ivH~dik~~NIll~~~~~~~~~~~-~~kl~Dfgla~~~~~ 596 (725)
|.+++++ ...+++..+++|+.|||+||.|||+. + ||||||||+||||+. ++ ++||+|||+++....
T Consensus 127 L~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~-------~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 127 LSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDL-------KGKTLKIADFGLSREKVI 196 (362)
T ss_pred HHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcC-------CCCEEEECCCccceeecc
Confidence 9999988 57899999999999999999999999 7 999999999999988 65 999999999987654
Q ss_pred CCCccccccccCccccchhccc--CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC
Q 039817 597 DQTRTSTMIRGTMGYMAPEWLR--NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL 674 (725)
Q Consensus 597 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (725)
.. ...+...||+.|||||.+. ...++.|+||||||++||||+||+.||+.... ......+........+
T Consensus 197 ~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--------~~~~~~v~~~~~Rp~~ 267 (362)
T KOG0192|consen 197 SK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--------VQVASAVVVGGLRPPI 267 (362)
T ss_pred cc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhcCCCCCC
Confidence 32 2233356999999999999 56999999999999999999999999985532 1122222222334455
Q ss_pred ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 675 GATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 675 ~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
+....+.+..++.+||+.||.+||++.+++..|+.+..
T Consensus 268 p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 268 PKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred CccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 66688999999999999999999999999999997654
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=332.27 Aligned_cols=226 Identities=27% Similarity=0.373 Sum_probs=191.3
Q ss_pred ceEEEEEEcc-cccCccHHHHHHHHHHHhccCcCCccceeeEEEcCC-ceeeeeecccCCChhhhhccCCCCCHHHHHHH
Q 039817 462 EVEVAVKQLE-KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN-HQLLVYELMKNGTLSAFLFRQEIPTWDKRVEI 539 (725)
Q Consensus 462 ~~~vavk~l~-~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i 539 (725)
+..+|+|.+. ..+....+++.+|++++++.+||+||.+||.|..+. ...|+||||++|||++++...+.+++...-+|
T Consensus 104 ~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~i 183 (364)
T KOG0581|consen 104 GKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKI 183 (364)
T ss_pred CeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHH
Confidence 4567888873 334455688999999999999999999999999988 59999999999999999998899999999999
Q ss_pred HHHHHHHhhhhhc-ccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhccc
Q 039817 540 ALGIARGLLYLHE-ECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR 618 (725)
Q Consensus 540 ~~qia~gL~yLH~-~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 618 (725)
+.+|++||.|||+ . +||||||||+|||++. .+.+||+|||.++.+.+. ....+.||..|||||.+.
T Consensus 184 a~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNs-------kGeVKicDFGVS~~lvnS---~a~tfvGT~~YMsPERi~ 250 (364)
T KOG0581|consen 184 ARAVLRGLSYLHEER---KIIHRDIKPSNLLVNS-------KGEVKICDFGVSGILVNS---IANTFVGTSAYMSPERIS 250 (364)
T ss_pred HHHHHHHHHHHhhcc---CeeeccCCHHHeeecc-------CCCEEeccccccHHhhhh---hcccccccccccChhhhc
Confidence 9999999999996 5 9999999999999988 899999999999976554 223467999999999999
Q ss_pred CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChh-HHHHHHHHHHHccCCCCC
Q 039817 619 NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGAT-KFERITMVGLWCICPQPT 695 (725)
Q Consensus 619 ~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~l~~l~~~cl~~dp~ 695 (725)
+..|+.++||||||++++|+.+|+.|+...... .....+.+..... ...++.. ..++++.++..||++||.
T Consensus 251 g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~------~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~ 324 (364)
T KOG0581|consen 251 GESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP------YLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPS 324 (364)
T ss_pred CCcCCcccceecccHHHHHHhhCCCCCCCcCCC------CCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999998765211 2222333333222 1234444 788999999999999999
Q ss_pred CCCCHHHHHHH
Q 039817 696 LRPSMKQVLQM 706 (725)
Q Consensus 696 ~RPs~~evl~~ 706 (725)
+||+++|+++|
T Consensus 325 ~R~s~~qLl~H 335 (364)
T KOG0581|consen 325 ERPSAKQLLQH 335 (364)
T ss_pred cCCCHHHHhcC
Confidence 99999999876
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=345.56 Aligned_cols=230 Identities=29% Similarity=0.442 Sum_probs=196.4
Q ss_pred eEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhcc--CCCCCHHHHHHHH
Q 039817 463 VEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR--QEIPTWDKRVEIA 540 (725)
Q Consensus 463 ~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~--~~~l~~~~~~~i~ 540 (725)
..||+|.++.. ....+.|.+|+++|++|+|+|||+++|+|..++..+||||||+.|+|.+||.. ...+...+.+.++
T Consensus 231 ~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a 309 (468)
T KOG0197|consen 231 TKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFA 309 (468)
T ss_pred CcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHH
Confidence 47899988764 44567899999999999999999999999999999999999999999999986 4678999999999
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCC
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 620 (725)
.|||+||+||+++ ++|||||.++||||++ +..+||+|||||+...++.........-+..|.|||.+..+
T Consensus 310 ~qIaeGM~YLes~---~~IHRDLAARNiLV~~-------~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~ 379 (468)
T KOG0197|consen 310 AQIAEGMAYLESK---NYIHRDLAARNILVDE-------DLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYG 379 (468)
T ss_pred HHHHHHHHHHHhC---Cccchhhhhhheeecc-------CceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhC
Confidence 9999999999999 9999999999999988 88999999999997766666555555667899999999999
Q ss_pred CCCCccceehhHHHHHHHHhCC-cCCCCCCCCccccccCcchHHHHHHHHHcCCC--ChhHHHHHHHHHHHccCCCCCCC
Q 039817 621 PVTAKVDVYSFGVMLLEIIFCK-RHTELHRVDEPTLANGMILTDWVLYCVRTGNL--GATKFERITMVGLWCICPQPTLR 697 (725)
Q Consensus 621 ~~~~ksDv~S~G~vl~elltg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~dp~~R 697 (725)
.++.|||||||||+||||+|.. .|+. ++...+.+....+...+ |...++.+.+++..||+.+|++|
T Consensus 380 ~FS~kSDVWSFGVlL~E~fT~G~~py~-----------~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~R 448 (468)
T KOG0197|consen 380 KFSSKSDVWSFGVLLWELFTYGRVPYP-----------GMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDR 448 (468)
T ss_pred CcccccceeehhhhHHHHhccCCCCCC-----------CCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccC
Confidence 9999999999999999999854 4433 23333444443333333 44678999999999999999999
Q ss_pred CCHHHHHHHhcCCCCCC
Q 039817 698 PSMKQVLQMLEGTSEVG 714 (725)
Q Consensus 698 Ps~~evl~~L~~~~~~~ 714 (725)
||++.+...|+.+....
T Consensus 449 PtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 449 PTFETLREVLEDFFTST 465 (468)
T ss_pred CCHHHHHHHHHHhhhcc
Confidence 99999999998876543
No 5
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3e-40 Score=361.51 Aligned_cols=245 Identities=29% Similarity=0.430 Sum_probs=206.4
Q ss_pred ccHHHHHHHhc---ccCCcceEEEEEEcccccCc-cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATN---VFDGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~---~~~~~~~~vavk~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..|++|++|.- ...++...||||.|+..... ..++|++|+++++.++|||||+|+|+|.+++..+||+|||..|+|
T Consensus 497 gaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL 576 (774)
T KOG1026|consen 497 GAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDL 576 (774)
T ss_pred chhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccH
Confidence 45777877764 33467889999999876655 778999999999999999999999999999999999999999999
Q ss_pred hhhhccC----------C----CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEee
Q 039817 522 SAFLFRQ----------E----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIAD 587 (725)
Q Consensus 522 ~~~l~~~----------~----~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~D 587 (725)
.+||... . .++..+.++|+.|||.||.||-+. .+|||||..+|+||.+ +..|||+|
T Consensus 577 ~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge-------~l~VKIsD 646 (774)
T KOG1026|consen 577 HEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGE-------NLVVKISD 646 (774)
T ss_pred HHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceecc-------ceEEEecc
Confidence 9999632 1 277889999999999999999999 9999999999999988 88999999
Q ss_pred ccCcccc-CcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHH
Q 039817 588 FGLAKLL-KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWV 665 (725)
Q Consensus 588 fgla~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 665 (725)
|||++-. ..+.........-+.+|||||.|..++++.+||||||||||||+++ |+.|+.... .+.+
T Consensus 647 fGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS------------n~EV 714 (774)
T KOG1026|consen 647 FGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS------------NQEV 714 (774)
T ss_pred cccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc------------hHHH
Confidence 9999854 4444443333345779999999999999999999999999999997 666765433 2234
Q ss_pred HHHHHcCC---CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 666 LYCVRTGN---LGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 666 ~~~~~~~~---~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
.+.++.+. -+...+.++++|+..||+.+|++||+++||-..|+...+
T Consensus 715 Ie~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 715 IECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred HHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 45555554 355778999999999999999999999999999988653
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-39 Score=327.75 Aligned_cols=242 Identities=25% Similarity=0.368 Sum_probs=197.6
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccccCc-------cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeec
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKVTGD-------GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYEL 515 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~-------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~ 515 (725)
+....|+.++.|.+.-+++ .||||.+.+..-. ......+|+++|++|+|||||++++++...+..||||||
T Consensus 180 LGsGafg~Vkla~e~~tgk--~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~ 257 (475)
T KOG0615|consen 180 LGSGAFGLVKLAYEKKTGK--QVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEY 257 (475)
T ss_pred ecCCceeEEEEEEEcccCc--EEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEE
Confidence 3456678888888776664 5777777542111 122346999999999999999999999999999999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccC
Q 039817 516 MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLK 595 (725)
Q Consensus 516 ~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~ 595 (725)
|++|.|.+++-.++.+.+..-..++.|++.|+.|||+. +|+||||||+|||+..+. ++..+||+|||+|+..+
T Consensus 258 v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~----e~~llKItDFGlAK~~g 330 (475)
T KOG0615|consen 258 VEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDA----EDCLLKITDFGLAKVSG 330 (475)
T ss_pred ecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCC----cceEEEecccchhhccc
Confidence 99999999999999999999999999999999999999 999999999999998853 36789999999999876
Q ss_pred cCCCccccccccCccccchhcccCCC---CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC
Q 039817 596 KDQTRTSTMIRGTMGYMAPEWLRNAP---VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG 672 (725)
Q Consensus 596 ~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (725)
. ...+...+||+.|.|||++.++. +..|.|+||+|||||-+++|.+||.....+. .+.++ +.++
T Consensus 331 ~--~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-------sl~eQ----I~~G 397 (475)
T KOG0615|consen 331 E--GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-------SLKEQ----ILKG 397 (475)
T ss_pred c--ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-------cHHHH----HhcC
Confidence 3 33455678999999999997663 3347899999999999999999998654332 12222 2233
Q ss_pred CCC------hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 673 NLG------ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 673 ~~~------~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+. ....++..+++.+||..||++|||++|++++
T Consensus 398 ~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 398 RYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 332 2568899999999999999999999999864
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-38 Score=332.15 Aligned_cols=236 Identities=29% Similarity=0.390 Sum_probs=200.4
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
.+|...+++++.-+| ..||+|.+.+. .....+...+||++.++|+|||||+++++|++.+..|||.|+|++++|.
T Consensus 29 GgFA~cYe~~~~~tg--e~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~ 106 (592)
T KOG0575|consen 29 GGFARCYEARDLDTG--EVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLM 106 (592)
T ss_pred CcceEEEEEEEcCCC--cEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHH
Confidence 445555555554444 46788877542 3445677899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
.++.+.+.+++.++..++.||+.||.|||+. +|+|||||..|+||++ +.++||+|||||..+..+..+..
T Consensus 107 el~Krrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~-------~~~VKIgDFGLAt~le~~~Erk~ 176 (592)
T KOG0575|consen 107 ELLKRRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNE-------NMNVKIGDFGLATQLEYDGERKK 176 (592)
T ss_pred HHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecC-------cCcEEecccceeeeecCcccccc
Confidence 9999889999999999999999999999999 9999999999999988 88999999999998876655443
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCChhHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGATKFE 680 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 680 (725)
+ .+||+.|.|||++....++..+||||+|||||-|+.|++||+..... .....+.. -.+|.....
T Consensus 177 T-lCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk------------ety~~Ik~~~Y~~P~~ls~ 243 (592)
T KOG0575|consen 177 T-LCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK------------ETYNKIKLNEYSMPSHLSA 243 (592)
T ss_pred e-ecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH------------HHHHHHHhcCcccccccCH
Confidence 3 67999999999999999999999999999999999999999855321 12222222 245667788
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 681 RITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+..+||.++|++||.+|||+++|+.+
T Consensus 244 ~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 244 EAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 89999999999999999999999975
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=319.44 Aligned_cols=198 Identities=29% Similarity=0.433 Sum_probs=172.9
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
+...+|+.|++|....++ ..||||.+.+. .....+.+..|+++|+.++|||||++++++..++..+||||||.+|+
T Consensus 18 iG~GsfavVykg~h~~~~--~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGD 95 (429)
T KOG0595|consen 18 IGSGSFAVVYKGRHKKSG--TEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGD 95 (429)
T ss_pred ccCcceEEEEEeEeccCC--ceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCC
Confidence 345677788888777666 78999998755 45566778999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|.+|+++.+.+++.....++.|+|.||++||++ +||||||||+||||+..... +..-.+||+|||+|+.+....
T Consensus 96 Ls~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~-~~~~~LKIADFGfAR~L~~~~-- 169 (429)
T KOG0595|consen 96 LSDYIRRRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARN-DTSPVLKIADFGFARFLQPGS-- 169 (429)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCC-CCCceEEecccchhhhCCchh--
Confidence 999999999999999999999999999999999 99999999999999874110 001679999999999886432
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCC
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELH 648 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~ 648 (725)
.....+|++-|||||++...+|+.|+|+||+|++||++++|+.||...
T Consensus 170 ~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 170 MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 234477999999999999999999999999999999999999999743
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-39 Score=309.06 Aligned_cols=244 Identities=24% Similarity=0.369 Sum_probs=198.5
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcc--cccCccHHHHHHHHHHHhccCcCCccceee-EEEcCCc-eeeeeecccCC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLE--KVTGDGEKSFLREVQVIGRTHHKNLVQLLG-FCIEQNH-QLLVYELMKNG 519 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~--~~~~~~~~~f~~E~~~l~~l~H~niv~l~g-~~~~~~~-~~lV~e~~~~g 519 (725)
.+.+|++++++....++. .+|.|.+. ..+.+..+....|+.+|++|+|||||++++ .+.++.+ .+||||++..|
T Consensus 28 G~GsFg~vykv~~~~~g~--l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~G 105 (375)
T KOG0591|consen 28 GRGSFGEVYKVQCLLDGK--LVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAG 105 (375)
T ss_pred cCCcchheEEeeeccCcc--hhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhccc
Confidence 456788888888887764 66777765 345556678999999999999999999999 4555555 89999999999
Q ss_pred Chhhhhcc----CCCCCHHHHHHHHHHHHHHhhhhhcccC-CceeecCCccceEEeccCccccCCCCceEEeeccCcccc
Q 039817 520 TLSAFLFR----QEIPTWDKRVEIALGIARGLLYLHEECE-TQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL 594 (725)
Q Consensus 520 sL~~~l~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~-~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~ 594 (725)
+|...+.. ++.++++.+++++.|+++||.++|.+.+ .-|+||||||.||+|+. ++.+||+||||++.+
T Consensus 106 DLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~-------~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 106 DLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA-------NGVVKLGDFGLGRFL 178 (375)
T ss_pred CHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC-------CCceeeccchhHhHh
Confidence 99998853 3678999999999999999999999422 13999999999999987 899999999999988
Q ss_pred CcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC
Q 039817 595 KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL 674 (725)
Q Consensus 595 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (725)
....... ...+||+.||+||.+.+.+|+.||||||+||++|||+.-+.||..... . .+...+.+++.
T Consensus 179 ~s~~tfA-~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~-----------~-~L~~KI~qgd~ 245 (375)
T KOG0591|consen 179 SSKTTFA-HSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL-----------L-SLCKKIEQGDY 245 (375)
T ss_pred cchhHHH-HhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH-----------H-HHHHHHHcCCC
Confidence 7655443 346799999999999999999999999999999999999999986521 1 12223334444
Q ss_pred C----hhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 675 G----ATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 675 ~----~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
+ ...+..+..|+..|+..||+.||+...++..+..
T Consensus 246 ~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 246 PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 3 4678899999999999999999985555554443
No 10
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=338.24 Aligned_cols=230 Identities=26% Similarity=0.395 Sum_probs=194.0
Q ss_pred cceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC-CCCCHHHHHH
Q 039817 461 QEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVE 538 (725)
Q Consensus 461 ~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~ 538 (725)
+.+.||||.|+... +..+.+|+.|+.+|.+++||||++|.|+.......+||.|||+||+|+.||..+ +.+++.+..-
T Consensus 656 re~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVg 735 (996)
T KOG0196|consen 656 REITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVG 735 (996)
T ss_pred cceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHH
Confidence 46799999998653 455678999999999999999999999999999999999999999999999876 6799999999
Q ss_pred HHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc--cccCccccchhc
Q 039817 539 IALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM--IRGTMGYMAPEW 616 (725)
Q Consensus 539 i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~--~~gt~~y~aPE~ 616 (725)
++++||.||.||-+. ++|||||.++|||++. +..+||+||||++.+.++.....+. ..-+.+|.|||.
T Consensus 736 MLrGIAsGMkYLsdm---~YVHRDLAARNILVNs-------nLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEA 805 (996)
T KOG0196|consen 736 MLRGIASGMKYLSDM---NYVHRDLAARNILVNS-------NLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEA 805 (996)
T ss_pred HHHHHHHHhHHHhhc---Cchhhhhhhhheeecc-------ceEEEeccccceeecccCCCccccccCCccceeecChhH
Confidence 999999999999998 9999999999999988 8999999999999876665333222 234568999999
Q ss_pred ccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhHHHHHHHHHHHccCCC
Q 039817 617 LRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATKFERITMVGLWCICPQ 693 (725)
Q Consensus 617 ~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~d 693 (725)
|...+++.+|||||||+||||+++ |.+|+=. +...+.+..... +-+.|.+.+.-|.+|+++|||+|
T Consensus 806 Ia~RKFTsASDVWSyGIVmWEVmSyGERPYWd-----------mSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkd 874 (996)
T KOG0196|consen 806 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-----------MSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKD 874 (996)
T ss_pred hhhcccCchhhccccceEEEEecccCCCcccc-----------cchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999996 5555522 111222222221 12455678899999999999999
Q ss_pred CCCCCCHHHHHHHhcCCC
Q 039817 694 PTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 694 p~~RPs~~evl~~L~~~~ 711 (725)
-.+||++.||+.+|+++.
T Consensus 875 R~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 875 RNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred hhcCCCHHHHHHHHHHHh
Confidence 999999999999998864
No 11
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=316.00 Aligned_cols=222 Identities=28% Similarity=0.409 Sum_probs=189.8
Q ss_pred cceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHH
Q 039817 461 QEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540 (725)
Q Consensus 461 ~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~ 540 (725)
.+..||||++........+-+++|+.+|+..+|+|||.++..+..++++++|||||++|+|.+.+... .+++.++..|+
T Consensus 297 ~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~-~~~E~qIA~Ic 375 (550)
T KOG0578|consen 297 TKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT-RMTEGQIAAIC 375 (550)
T ss_pred CCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcc-cccHHHHHHHH
Confidence 34569999997665555667899999999999999999999999999999999999999999998554 48999999999
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCC
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 620 (725)
.+++.||+|||.+ +|+|||||.+|||++. ++.+||+|||++..+........+ ..||+.|||||.+...
T Consensus 376 re~l~aL~fLH~~---gIiHrDIKSDnILL~~-------~g~vKltDFGFcaqi~~~~~KR~T-mVGTPYWMAPEVvtrk 444 (550)
T KOG0578|consen 376 REILQGLKFLHAR---GIIHRDIKSDNILLTM-------DGSVKLTDFGFCAQISEEQSKRST-MVGTPYWMAPEVVTRK 444 (550)
T ss_pred HHHHHHHHHHHhc---ceeeeccccceeEecc-------CCcEEEeeeeeeeccccccCcccc-ccCCCCccchhhhhhc
Confidence 9999999999999 9999999999999988 888999999999887766554333 5599999999999999
Q ss_pred CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCC----CChhHHHHHHHHHHHccCCCCC
Q 039817 621 PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGN----LGATKFERITMVGLWCICPQPT 695 (725)
Q Consensus 621 ~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~l~~l~~~cl~~dp~ 695 (725)
.|.+|.||||||++++||+-|.+|+..+.... +..++. .+. .+......+++++.+||+.|++
T Consensus 445 ~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr------------AlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~ 512 (550)
T KOG0578|consen 445 PYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR------------ALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVE 512 (550)
T ss_pred ccCccccchhhhhHHHHHhcCCCCccCCChHH------------HHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchh
Confidence 99999999999999999999999997532211 111121 222 2345678899999999999999
Q ss_pred CCCCHHHHHHH
Q 039817 696 LRPSMKQVLQM 706 (725)
Q Consensus 696 ~RPs~~evl~~ 706 (725)
+|+++.|+++|
T Consensus 513 ~RasA~eLL~H 523 (550)
T KOG0578|consen 513 QRASAKELLEH 523 (550)
T ss_pred cCCCHHHHhcC
Confidence 99999999986
No 12
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=342.33 Aligned_cols=247 Identities=30% Similarity=0.462 Sum_probs=200.9
Q ss_pred cccHHHHHHHhcc-cCCc--ceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 445 VFSYQELREATNV-FDGQ--EVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 445 ~~~~~~l~~a~~~-~~~~--~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
...|++|++++-. ..++ ...||||.+.+. +.+...+|++|..+|+.++|||||+++|+|......+|++|||++|+
T Consensus 702 ~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGD 781 (1025)
T KOG1095|consen 702 KGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGD 781 (1025)
T ss_pred cccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCc
Confidence 3457788877642 3333 678999999764 45567789999999999999999999999999999999999999999
Q ss_pred hhhhhccC-------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 521 LSAFLFRQ-------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 521 L~~~l~~~-------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
|..||.+. ..++....+.++.|||+|+.|||++ ++|||||.++|+||+. ...+||+|||||+-
T Consensus 782 L~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~-------~r~VKIaDFGlArD 851 (1025)
T KOG1095|consen 782 LLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDE-------RRVVKIADFGLARD 851 (1025)
T ss_pred HHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecc-------cCcEEEcccchhHh
Confidence 99999765 3578999999999999999999999 9999999999999988 78999999999993
Q ss_pred -cCcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHc
Q 039817 594 -LKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRT 671 (725)
Q Consensus 594 -~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (725)
+..+..+......-+..|||||.+..+.++.|+|||||||+|||++| |..|+..... .+.+......
T Consensus 852 iy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-----------~~v~~~~~~g 920 (1025)
T KOG1095|consen 852 IYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-----------FEVLLDVLEG 920 (1025)
T ss_pred hhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch-----------HHHHHHHHhC
Confidence 34333333222234578999999999999999999999999999998 4455543321 1122222333
Q ss_pred CC--CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 672 GN--LGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 672 ~~--~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
+. .+...++.+.+|+..||+.+|++||++..+++.++.+.+
T Consensus 921 gRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 921 GRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred CccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 33 445678999999999999999999999999998887653
No 13
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=308.68 Aligned_cols=245 Identities=29% Similarity=0.369 Sum_probs=195.9
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCC--ceeeeeecccCCCh
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN--HQLLVYELMKNGTL 521 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~e~~~~gsL 521 (725)
.+.+|+.++.+++.-+ +...|||.....+....+.+.+|+++|++++|||||+++|...... .+++.|||+++|||
T Consensus 26 G~Gs~G~V~l~~~~~~--g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL 103 (313)
T KOG0198|consen 26 GRGSFGSVYLATNKKT--GELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSL 103 (313)
T ss_pred cCccceEEEEEEecCC--CcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcH
Confidence 4466777777776655 4567888776543333677899999999999999999999855444 68999999999999
Q ss_pred hhhhccCC-CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc--CC
Q 039817 522 SAFLFRQE-IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK--DQ 598 (725)
Q Consensus 522 ~~~l~~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~--~~ 598 (725)
.+++.+.+ .+++..+..+..|+++||.|||++ +|+||||||+|||++.. ++.+||+|||+++.... ..
T Consensus 104 ~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~------~~~~KlaDFG~a~~~~~~~~~ 174 (313)
T KOG0198|consen 104 SDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPS------NGDVKLADFGLAKKLESKGTK 174 (313)
T ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCC------CCeEEeccCcccccccccccc
Confidence 99998876 799999999999999999999999 99999999999999862 47999999999987663 22
Q ss_pred CccccccccCccccchhcccCCC-CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc---CCC
Q 039817 599 TRTSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT---GNL 674 (725)
Q Consensus 599 ~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 674 (725)
........||+.|||||++.++. ...++|||||||++.||+||+.||... . ............ ..+
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~---------~~~~~~~~ig~~~~~P~i 244 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-F---------EEAEALLLIGREDSLPEI 244 (313)
T ss_pred ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-c---------chHHHHHHHhccCCCCCC
Confidence 22233467999999999998643 335999999999999999999999753 0 011112222212 245
Q ss_pred ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 675 GATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 675 ~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
+...++...+++.+|++.||++|||+++++++.--
T Consensus 245 p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 245 PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred CcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 66778899999999999999999999999998643
No 14
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-36 Score=300.75 Aligned_cols=237 Identities=24% Similarity=0.238 Sum_probs=196.2
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
...+|++|....+. ..+...|+|.+++. .....+..++|..+|.+++||.||+++-.|++++.+|||+||+.||.
T Consensus 34 GkG~fGkV~~Vrk~--dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGe 111 (357)
T KOG0598|consen 34 GKGSFGKVFQVRKK--DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGE 111 (357)
T ss_pred eccCCceEEEEEEc--ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCcc
Confidence 34567777666665 45567899888653 23346678999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|..+|.+.+.+++..+.-++..|+.||.|||+. +||||||||+|||||. .|.++|+||||++........
T Consensus 112 Lf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~-------~GHi~LtDFgL~k~~~~~~~~ 181 (357)
T KOG0598|consen 112 LFYHLQREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDE-------QGHIKLTDFGLCKEDLKDGDA 181 (357)
T ss_pred HHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecC-------CCcEEEeccccchhcccCCCc
Confidence 999999999999999999999999999999999 9999999999999988 999999999999965444333
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC-C-CChhH
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG-N-LGATK 678 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 678 (725)
...++||+.|||||++.+..|+..+|.||+|+++|||++|.+||..... .++........ . .+...
T Consensus 182 -t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-----------~~~~~~I~~~k~~~~p~~l 249 (357)
T KOG0598|consen 182 -TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-----------KKMYDKILKGKLPLPPGYL 249 (357)
T ss_pred -cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-----------HHHHHHHhcCcCCCCCccC
Confidence 2337899999999999999999999999999999999999999986532 22222222222 2 23336
Q ss_pred HHHHHHHHHHccCCCCCCCC----CHHHHH
Q 039817 679 FERITMVGLWCICPQPTLRP----SMKQVL 704 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RP----s~~evl 704 (725)
..+.++++...++.||++|. .+.+|.
T Consensus 250 s~~ardll~~LL~rdp~~RLg~~~d~~~ik 279 (357)
T KOG0598|consen 250 SEEARDLLKKLLKRDPRQRLGGPGDAEEIK 279 (357)
T ss_pred CHHHHHHHHHHhccCHHHhcCCCCChHHhh
Confidence 78899999999999999995 455544
No 15
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=323.26 Aligned_cols=255 Identities=25% Similarity=0.344 Sum_probs=204.1
Q ss_pred cccccHHHHHHHhcccCCc-c-eEEEEEEccc---ccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeeccc
Q 039817 443 MKVFSYQELREATNVFDGQ-E-VEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~-~-~~vavk~l~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~ 517 (725)
+....|++|+.++-...+. . ..||||..+. .......+|++|+++|++++|||||++||++......++|||+|.
T Consensus 165 LGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~ 244 (474)
T KOG0194|consen 165 LGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCN 244 (474)
T ss_pred eecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecC
Confidence 3456788888877665543 2 2389999874 345667899999999999999999999999999999999999999
Q ss_pred CCChhhhhccCC-CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 518 NGTLSAFLFRQE-IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 518 ~gsL~~~l~~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
||+|++||.+.+ .++..++..++.++|+||+|||++ +++||||.++|+|++. +..+||+||||++.-..
T Consensus 245 gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~-------~~~vKISDFGLs~~~~~ 314 (474)
T KOG0194|consen 245 GGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSK-------KGVVKISDFGLSRAGSQ 314 (474)
T ss_pred CCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecC-------CCeEEeCccccccCCcc
Confidence 999999998886 599999999999999999999999 9999999999999987 67799999999886431
Q ss_pred CCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCC
Q 039817 597 DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG 675 (725)
Q Consensus 597 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (725)
.........-+..|+|||.+....++.++|||||||++||+++ |..|+...... ....++......-..+
T Consensus 315 -~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--------~v~~kI~~~~~r~~~~ 385 (474)
T KOG0194|consen 315 -YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--------EVKAKIVKNGYRMPIP 385 (474)
T ss_pred -eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--------HHHHHHHhcCccCCCC
Confidence 1111111235678999999999999999999999999999998 67776543211 1222221111123445
Q ss_pred hhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCCCC
Q 039817 676 ATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVP 716 (725)
Q Consensus 676 ~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~p 716 (725)
...+..+..++..||..+|++||+|.++.+.|+.+.....+
T Consensus 386 ~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 386 SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred CCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 56788899999999999999999999999999887654443
No 16
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=307.02 Aligned_cols=238 Identities=28% Similarity=0.420 Sum_probs=195.6
Q ss_pred cccHHHHHHHhcccCCc----------ceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeee
Q 039817 445 VFSYQELREATNVFDGQ----------EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYE 514 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~----------~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e 514 (725)
.+.|++|-.-...-+|. +..||||+++... ..+|+-|++|+|+||+.+.|+|.....++||||
T Consensus 120 eiPFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiME 192 (904)
T KOG4721|consen 120 EIPFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIME 192 (904)
T ss_pred cCCHHHhhhhhhhccCcccceeeeeccCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeee
Confidence 44566665544433332 4567777664322 246788999999999999999999999999999
Q ss_pred cccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcccc
Q 039817 515 LMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL 594 (725)
Q Consensus 515 ~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~ 594 (725)
||..|-|...|...+.++-.....|..+||.||.|||.+ .|||||||.-||||.. +..+||+|||-++..
T Consensus 193 fCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~-------~d~VKIsDFGTS~e~ 262 (904)
T KOG4721|consen 193 FCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISY-------DDVVKISDFGTSKEL 262 (904)
T ss_pred ccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeec-------cceEEeccccchHhh
Confidence 999999999999999999999999999999999999999 9999999999999987 778999999999876
Q ss_pred CcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC
Q 039817 595 KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL 674 (725)
Q Consensus 595 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (725)
... .....+.||..|||||+|.+.+.++|.||||||||||||+||..|+............+.. ...-.+
T Consensus 263 ~~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsN--------sL~Lpv 332 (904)
T KOG4721|consen 263 SDK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSN--------SLHLPV 332 (904)
T ss_pred hhh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCC--------cccccC
Confidence 543 2334578999999999999999999999999999999999999999765443322211111 112356
Q ss_pred ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 675 GATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 675 ~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
+...++-+.-|+++||+..|..||++.+++.||+-
T Consensus 333 PstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 333 PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred cccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 66788889999999999999999999999999963
No 17
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=306.09 Aligned_cols=229 Identities=23% Similarity=0.282 Sum_probs=185.7
Q ss_pred ceEEEEEEcccccCcc---HHHHHHHHHHHhccCcCCccceeeEEEc----CCceeeeeecccCCChhhhhccCCCCCHH
Q 039817 462 EVEVAVKQLEKVTGDG---EKSFLREVQVIGRTHHKNLVQLLGFCIE----QNHQLLVYELMKNGTLSAFLFRQEIPTWD 534 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~---~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~l~~~ 534 (725)
+..||||.++...... .+.|.+|+++|++++||||++++|++.+ ....++||||+++|+|.+++.+.+.+++.
T Consensus 43 ~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~ 122 (283)
T PHA02988 43 NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFK 122 (283)
T ss_pred CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChh
Confidence 5689999987543333 4678899999999999999999999876 34678999999999999999888889999
Q ss_pred HHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccch
Q 039817 535 KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAP 614 (725)
Q Consensus 535 ~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aP 614 (725)
...+++.|++.||.|||+. .+++||||||+||+++. ++.+||+|||+++...... ....++..|+||
T Consensus 123 ~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~-------~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aP 189 (283)
T PHA02988 123 TKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTE-------NYKLKIICHGLEKILSSPP----FKNVNFMVYFSY 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECC-------CCcEEEcccchHhhhcccc----ccccCcccccCH
Confidence 9999999999999999973 16789999999999987 7899999999998654322 123478899999
Q ss_pred hcccC--CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCC
Q 039817 615 EWLRN--APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICP 692 (725)
Q Consensus 615 E~~~~--~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 692 (725)
|++.+ ..++.++||||||+++|||++|+.||...... .....+.........+...++.+.+++.+||+.
T Consensus 190 E~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~ 261 (283)
T PHA02988 190 KMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--------EIYDLIINKNNSLKLPLDCPLEIKCIVEACTSH 261 (283)
T ss_pred HHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcC
Confidence 99976 68999999999999999999999999743211 111111111112233445678899999999999
Q ss_pred CCCCCCCHHHHHHHhcCCC
Q 039817 693 QPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 693 dp~~RPs~~evl~~L~~~~ 711 (725)
||++|||++||++.|+.+.
T Consensus 262 dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 262 DSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CcccCcCHHHHHHHHHHHH
Confidence 9999999999999998754
No 18
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-35 Score=293.42 Aligned_cols=240 Identities=21% Similarity=0.337 Sum_probs=207.3
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCC
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 519 (725)
+...+|+.++.|++.+.| +.||||.+++. +.++.-.+++|+++|+.|+||||+.++.+|+..+...|||||..+|
T Consensus 61 LGkGTYGKVk~A~e~~sg--R~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~G 138 (668)
T KOG0611|consen 61 LGKGTYGKVKLAYEHKSG--REVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGG 138 (668)
T ss_pred hcCCcccceeehhhccCC--cEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCc
Confidence 456789999999998876 47888888653 3455567899999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 520 sL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
.|.+|+.+.+.+++....+++.||++|+.|+|++ +++|||||.+|||||. ++++||+||||+-++.....
T Consensus 139 eLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~-------N~NiKIADFGLSNly~~~kf 208 (668)
T KOG0611|consen 139 ELYDYISERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQ-------NNNIKIADFGLSNLYADKKF 208 (668)
T ss_pred cHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecC-------CCCeeeeccchhhhhccccH
Confidence 9999999999999999999999999999999999 9999999999999988 89999999999998765433
Q ss_pred ccccccccCccccchhcccCCCCC-CccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhH
Q 039817 600 RTSTMIRGTMGYMAPEWLRNAPVT-AKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATK 678 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~~~~~-~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (725)
.+.++|++.|.+||.+.+.+|. +..|-||||++||-|+.|.-||+..+ ....+++.....-...+.
T Consensus 209 --LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-----------hk~lvrQIs~GaYrEP~~ 275 (668)
T KOG0611|consen 209 --LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-----------HKRLVRQISRGAYREPET 275 (668)
T ss_pred --HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-----------HHHHHHHhhcccccCCCC
Confidence 3457899999999999999885 78999999999999999999998653 233344443333334456
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 679 FERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
+....-||+|||..||++|-|+.+|..+.
T Consensus 276 PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 276 PSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred CchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 66788899999999999999999999875
No 19
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-35 Score=306.02 Aligned_cols=231 Identities=28% Similarity=0.423 Sum_probs=187.1
Q ss_pred ceEEEEEEcccccCcc-HHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCC--CCHHHHHH
Q 039817 462 EVEVAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEI--PTWDKRVE 538 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~-~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--l~~~~~~~ 538 (725)
...||||.++...... +++|.+|+++|.+++|||||+|+|+|..++.+++|+|||++|+|.+|+.++.. +.-..-.+
T Consensus 562 ~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vs 641 (807)
T KOG1094|consen 562 PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVS 641 (807)
T ss_pred ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHH
Confidence 4689999998765444 48999999999999999999999999999999999999999999999988743 34556778
Q ss_pred HHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcccc-CcCCCccccccccCccccchhcc
Q 039817 539 IALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL-KKDQTRTSTMIRGTMGYMAPEWL 617 (725)
Q Consensus 539 i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~-~~~~~~~~~~~~gt~~y~aPE~~ 617 (725)
|+.|||+||+||.+. ++|||||.++|+|+|. ++++||+|||+++-+ ..+.....-...-+.+|||||.+
T Consensus 642 i~tqiasgmaYLes~---nfVHrd~a~rNcLv~~-------e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsi 711 (807)
T KOG1094|consen 642 ICTQIASGMAYLESL---NFVHRDLATRNCLVDG-------EFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESI 711 (807)
T ss_pred HHHHHHHHHHHHHhh---chhhccccccceeecC-------cccEEecCcccccccccCCceeeecceeeeeeehhHHHH
Confidence 999999999999998 9999999999999987 999999999999954 33333333345567899999999
Q ss_pred cCCCCCCccceehhHHHHHHHHh--CCcCCCCCCCCccccccCcchHHHHHHHHHc------CCCChhHHHHHHHHHHHc
Q 039817 618 RNAPVTAKVDVYSFGVMLLEIIF--CKRHTELHRVDEPTLANGMILTDWVLYCVRT------GNLGATKFERITMVGLWC 689 (725)
Q Consensus 618 ~~~~~~~ksDv~S~G~vl~ellt--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~l~~~c 689 (725)
..++++.+||||+||+.|||+++ ..+|++....+. ..+..-..... ...|...+..+.+++..|
T Consensus 712 llgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--------vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~C 783 (807)
T KOG1094|consen 712 LLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--------VVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRC 783 (807)
T ss_pred HhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--------HHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHH
Confidence 99999999999999999999974 555665332211 11111111111 123446678899999999
Q ss_pred cCCCCCCCCCHHHHHHHhcCC
Q 039817 690 ICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 690 l~~dp~~RPs~~evl~~L~~~ 710 (725)
|..|-++||+++++...|+..
T Consensus 784 w~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 784 WRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred hchhhhcCCCHHHHHHHHHHh
Confidence 999999999999999999753
No 20
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=292.47 Aligned_cols=222 Identities=23% Similarity=0.310 Sum_probs=180.7
Q ss_pred eEEEEEEcccccCc-cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC--CCCCHHHHHHH
Q 039817 463 VEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ--EIPTWDKRVEI 539 (725)
Q Consensus 463 ~~vavk~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i 539 (725)
..||||++.-.... ..+.+++|+..|+.++||||++++-.|..+..+++||.||.+||+.+.++.. ..+++..+..|
T Consensus 52 e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~i 131 (516)
T KOG0582|consen 52 EVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATI 131 (516)
T ss_pred CEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHH
Confidence 57888887533222 3588999999999999999999999999999999999999999999999765 56899999999
Q ss_pred HHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc---cccccCccccchhc
Q 039817 540 ALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS---TMIRGTMGYMAPEW 616 (725)
Q Consensus 540 ~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~---~~~~gt~~y~aPE~ 616 (725)
+.++++||.|||++ +.||||||+.||||+. +|.+||+|||.+-.+.....+.. ..+.||+.|||||+
T Consensus 132 Lre~LkaL~YLH~~---G~IHRdvKAgnILi~~-------dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEv 201 (516)
T KOG0582|consen 132 LREVLKALDYLHQN---GHIHRDVKAGNILIDS-------DGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEV 201 (516)
T ss_pred HHHHHHHHHHHHhc---CceecccccccEEEcC-------CCcEEEcCceeeeeecccCceeeEeeccccCcccccChHH
Confidence 99999999999999 9999999999999988 89999999998765543322221 34579999999999
Q ss_pred ccC--CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC--------Ch----hHHHHH
Q 039817 617 LRN--APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL--------GA----TKFERI 682 (725)
Q Consensus 617 ~~~--~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~~l 682 (725)
+.. ..|+.|+||||||+...||.+|..||..... .+.+...++ +.. +. .....+
T Consensus 202 l~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP-----------mkvLl~tLq-n~pp~~~t~~~~~d~~k~~~ksf 269 (516)
T KOG0582|consen 202 LMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP-----------MKVLLLTLQ-NDPPTLLTSGLDKDEDKKFSKSF 269 (516)
T ss_pred hhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh-----------HHHHHHHhc-CCCCCcccccCChHHhhhhcHHH
Confidence 543 4799999999999999999999999974321 111111111 111 11 234578
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
++++..||++||++|||+++++++
T Consensus 270 ~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 270 REMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred HHHHHHHhhcCcccCCCHHHHhcc
Confidence 899999999999999999999865
No 21
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-35 Score=303.12 Aligned_cols=243 Identities=25% Similarity=0.287 Sum_probs=204.2
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccC
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKN 518 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~ 518 (725)
+...+|+.|..|++.-.+ ..+|||.+.+. .+.-.+....|-++|.+| .||.|++|+--|+++..+|+|+||+++
T Consensus 81 lGeGSYStV~~A~~~~t~--keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~n 158 (604)
T KOG0592|consen 81 LGEGSYSTVVLAREKATG--KEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPN 158 (604)
T ss_pred eccccceeEEEeeecCCC--ceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCC
Confidence 455678888889887754 57788887642 223345577899999999 899999999999999999999999999
Q ss_pred CChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 519 GTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 519 gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
|.|.++|.+.+.+++.....++.+|+.||+|||+. +||||||||+|||||. ++.+||+|||-|+.+....
T Consensus 159 Gdll~~i~K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~-------dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 159 GDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDK-------DGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred CcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcC-------CCcEEEeeccccccCChhh
Confidence 99999999999999999999999999999999999 9999999999999988 8999999999999875322
Q ss_pred Cc----------cc--cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHH
Q 039817 599 TR----------TS--TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVL 666 (725)
Q Consensus 599 ~~----------~~--~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (725)
.. .. ..++||..|.+||.+..+..+..+|+|+|||+||.|+.|++||.... +...-+.+.
T Consensus 229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N--------eyliFqkI~ 300 (604)
T KOG0592|consen 229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN--------EYLIFQKIQ 300 (604)
T ss_pred ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc--------HHHHHHHHH
Confidence 21 11 34789999999999999999999999999999999999999997542 122222222
Q ss_pred HHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 667 YCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 667 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
. ..-.++...++.+.+|+.+.|..||.+|+|.+||.+|.
T Consensus 301 ~--l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 301 A--LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred H--hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 1 23456777789999999999999999999999999875
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.5e-35 Score=299.51 Aligned_cols=261 Identities=25% Similarity=0.266 Sum_probs=202.5
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcC--CceeeeeecccCC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKNG 519 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~e~~~~g 519 (725)
...+|++|++|.+.-+++ .||+|++.... ..-..-..+||.+|++|.||||++|.+...+. ..+|||+|||+.
T Consensus 126 GeGTyg~VYkAr~~~tgk--ivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh- 202 (560)
T KOG0600|consen 126 GEGTYGQVYKARDLETGK--IVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH- 202 (560)
T ss_pred cCcchhheeEeeecccCc--EEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-
Confidence 457899999999887764 67888875433 44455678999999999999999999998876 689999999998
Q ss_pred ChhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 520 TLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 520 sL~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
+|.-++... -.++..++..++.|++.||.|+|.. +|+|||||.+|||||+ ++.+||+|||||+++....
T Consensus 203 DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn-------~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 203 DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDN-------NGVLKIADFGLARFYTPSG 272 (560)
T ss_pred hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcC-------CCCEEeccccceeeccCCC
Confidence 888888664 4789999999999999999999999 9999999999999988 8999999999999888777
Q ss_pred CccccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccc-----cccCcchHHHHHHHHHcC
Q 039817 599 TRTSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT-----LANGMILTDWVLYCVRTG 672 (725)
Q Consensus 599 ~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 672 (725)
....+..+-|.-|.|||.+.+. .|+.+.|+||.||||.||++|++.+.....-++. +-.......|- ..
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~-----~~ 347 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP-----VS 347 (560)
T ss_pred CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc-----cc
Confidence 6666767789999999999875 7999999999999999999999988754322110 00000000011 00
Q ss_pred CCC-------------------hhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCCCCCCccccC
Q 039817 673 NLG-------------------ATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVPPVVADAQ 723 (725)
Q Consensus 673 ~~~-------------------~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~p~~~~~~~ 723 (725)
.++ ...++...+|+..+|..||.+|.|+.++++.= =+..-+.|..|++++
T Consensus 348 kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~se-yF~t~p~~~~p~~Lp 416 (560)
T KOG0600|consen 348 KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSE-YFTTEPLPCDPSSLP 416 (560)
T ss_pred cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCc-ccccCCCCCCcccCC
Confidence 111 12345677889999999999999999998642 112344444444443
No 23
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1e-34 Score=310.87 Aligned_cols=247 Identities=27% Similarity=0.383 Sum_probs=191.9
Q ss_pred ccccHHHHHHHhccc---CCcceEEEEEEcccccC-ccHHHHHHHHHHHhcc-CcCCccceeeEEEcC-Cceeeeeeccc
Q 039817 444 KVFSYQELREATNVF---DGQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQ-NHQLLVYELMK 517 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~---~~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~-~~~~lV~e~~~ 517 (725)
...+|+.|++|.... ......||||.+..... ...+.+.+|++++.++ +||||++++++|... +..++||||++
T Consensus 16 G~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~ 95 (338)
T cd05102 16 GHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCK 95 (338)
T ss_pred ccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCC
Confidence 345677888776421 22345799999864332 3346799999999999 899999999998764 46889999999
Q ss_pred CCChhhhhccC--------------------------------------------------------------CCCCHHH
Q 039817 518 NGTLSAFLFRQ--------------------------------------------------------------EIPTWDK 535 (725)
Q Consensus 518 ~gsL~~~l~~~--------------------------------------------------------------~~l~~~~ 535 (725)
+|+|.+++... ..+++..
T Consensus 96 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 175 (338)
T cd05102 96 YGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMED 175 (338)
T ss_pred CCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHH
Confidence 99999998642 2367788
Q ss_pred HHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc-ccccccCccccch
Q 039817 536 RVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT-STMIRGTMGYMAP 614 (725)
Q Consensus 536 ~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aP 614 (725)
+..++.|+++||.|||+. +|+||||||+|||++. ++.+||+|||+++......... .....++..|+||
T Consensus 176 ~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~-------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 245 (338)
T cd05102 176 LICYSFQVARGMEFLASR---KCIHRDLAARNILLSE-------NNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP 245 (338)
T ss_pred HHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcC-------CCcEEEeecccccccccCcchhcccCCCCCccccCc
Confidence 899999999999999998 9999999999999987 7889999999998654322211 1123456789999
Q ss_pred hcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHc---CCCChhHHHHHHHHHHHcc
Q 039817 615 EWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRT---GNLGATKFERITMVGLWCI 690 (725)
Q Consensus 615 E~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl 690 (725)
|.+.+..++.++||||||+++|||++ |..|+....... ........ ...+...++.+.+++.+||
T Consensus 246 E~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 314 (338)
T cd05102 246 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-----------EFCQRLKDGTRMRAPENATPEIYRIMLACW 314 (338)
T ss_pred HHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-----------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence 99999999999999999999999997 888886532211 01111111 1223455678999999999
Q ss_pred CCCCCCCCCHHHHHHHhcCCC
Q 039817 691 CPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 691 ~~dp~~RPs~~evl~~L~~~~ 711 (725)
+.||++|||+.||++.|+.+.
T Consensus 315 ~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 315 QGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred cCChhhCcCHHHHHHHHHHHH
Confidence 999999999999999998764
No 24
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=306.98 Aligned_cols=238 Identities=23% Similarity=0.366 Sum_probs=196.4
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccc----cC-ccHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecc
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKV----TG-DGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELM 516 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~----~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~ 516 (725)
+...+|+.++.|....++ ..||+|.+... .. ...+.+.+|+.++++++ ||||++++.++......++||||+
T Consensus 25 lG~GsfgkV~~a~~~~t~--~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~ 102 (370)
T KOG0583|consen 25 LGSGSFGKVKLAKHRLTG--EKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYC 102 (370)
T ss_pred ecCCCCeeEEEeeeccCC--CeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEec
Confidence 345567788888777766 56778865442 11 33556778999999998 999999999999999999999999
Q ss_pred cCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCC-CceEEeeccCccccC
Q 039817 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNN-YITKIADFGLAKLLK 595 (725)
Q Consensus 517 ~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~-~~~kl~Dfgla~~~~ 595 (725)
.+|.|.+++.+.+++.+.....++.|+++|++|+|+. +|+||||||+|||++. + +++||+|||++....
T Consensus 103 ~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~-------~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 103 SGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDG-------NEGNLKLSDFGLSAISP 172 (370)
T ss_pred CCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecC-------CCCCEEEeccccccccC
Confidence 9999999999988999999999999999999999999 9999999999999987 5 899999999999874
Q ss_pred cCCCccccccccCccccchhcccCCC-CC-CccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC-
Q 039817 596 KDQTRTSTMIRGTMGYMAPEWLRNAP-VT-AKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG- 672 (725)
Q Consensus 596 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 672 (725)
.........+|++.|+|||++.+.. |+ .++||||+||+||.|++|+.||+.... ...... +..+
T Consensus 173 -~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~-----------~~l~~k-i~~~~ 239 (370)
T KOG0583|consen 173 -GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV-----------PNLYRK-IRKGE 239 (370)
T ss_pred -CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH-----------HHHHHH-HhcCC
Confidence 1222334567999999999999877 76 789999999999999999999986321 111111 2233
Q ss_pred -CCChhH-HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 039817 673 -NLGATK-FERITMVGLWCICPQPTLRPSMKQVLQ 705 (725)
Q Consensus 673 -~~~~~~-~~~l~~l~~~cl~~dp~~RPs~~evl~ 705 (725)
.++... ...+..++.+|++.||.+|+|+.++++
T Consensus 240 ~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 240 FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 344445 889999999999999999999999993
No 25
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.5e-35 Score=302.02 Aligned_cols=241 Identities=32% Similarity=0.482 Sum_probs=187.0
Q ss_pred ccHHHHHHHhcc--cCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNV--FDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~--~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..|+++++|+.. -......|+||.++... ....+.|.+|++.+++++||||++++|+|...+..++||||+++|+|.
T Consensus 10 G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~ 89 (259)
T PF07714_consen 10 GSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLD 89 (259)
T ss_dssp ESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHH
T ss_pred CCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccccccccc
Confidence 445566666655 34567899999996533 334688999999999999999999999999888899999999999999
Q ss_pred hhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC-
Q 039817 523 AFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT- 599 (725)
Q Consensus 523 ~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~- 599 (725)
++|... ..+++..+..|+.|+++||.|||+. +++|++|+++||+++. ++.+||+|||++........
T Consensus 90 ~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~-------~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 90 DYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDS-------NGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp HHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEET-------TTEEEEESTTTGEETTTSSSE
T ss_pred ccccccccccccccccccccccccccccccccc---cccccccccccccccc-------ccccccccccccccccccccc
Confidence 999886 6789999999999999999999999 9999999999999988 78999999999987632222
Q ss_pred ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCCh
Q 039817 600 RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGA 676 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 676 (725)
...........|+|||.+....++.++||||||+++|||++ |+.|+.... ..+....... ....+.
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~-----------~~~~~~~~~~~~~~~~~~ 228 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD-----------NEEIIEKLKQGQRLPIPD 228 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC-----------HHHHHHHHHTTEETTSBT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc-----------cccccccccccccceecc
Confidence 12222446778999999998889999999999999999999 567654321 1111222211 122344
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
..+..+.+++..||+.+|++|||+.++++.|
T Consensus 229 ~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 229 NCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred chhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 5678899999999999999999999999986
No 26
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-34 Score=304.04 Aligned_cols=240 Identities=25% Similarity=0.319 Sum_probs=202.2
Q ss_pred CcccccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccC
Q 039817 442 NMKVFSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKN 518 (725)
Q Consensus 442 ~~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~ 518 (725)
.+...+-+-++.|++..+|+ .+|||.+.+. .......+.+|+-+|+.+.|||++++|++++++.++|+|.||+++
T Consensus 19 TLG~Gstg~vrlakh~~TGq--laaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~g 96 (786)
T KOG0588|consen 19 TLGKGSTGCVRLAKHAETGQ--LAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPG 96 (786)
T ss_pred cccCCCCceehhhhcccccc--eeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCC
Confidence 34455667788888888775 5677766443 333455688999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 519 GTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 519 gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
|-|.+++.+++.+++....+++.||+.|+.|+|.. +|+|||+||+|+|||. .+++||+|||+|.+-..+.
T Consensus 97 GELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~-------~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 97 GELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDV-------KNNIKIADFGMASLEVPGK 166 (786)
T ss_pred chhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhc-------ccCEeeeccceeecccCCc
Confidence 99999999999999999999999999999999999 9999999999999988 6679999999998765443
Q ss_pred CccccccccCccccchhcccCCCCC-CccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC--CCC
Q 039817 599 TRTSTMIRGTMGYMAPEWLRNAPVT-AKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG--NLG 675 (725)
Q Consensus 599 ~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 675 (725)
-. ..-+|.+.|.+||.+.+.+|. .++||||.||+||.|++|+.||+... +.. +....++| .+|
T Consensus 167 lL--eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN-----------ir~-LLlKV~~G~f~MP 232 (786)
T KOG0588|consen 167 LL--ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN-----------IRV-LLLKVQRGVFEMP 232 (786)
T ss_pred cc--cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc-----------HHH-HHHHHHcCcccCC
Confidence 32 335699999999999999886 68999999999999999999998332 111 22223334 466
Q ss_pred hhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 676 ATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 676 ~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
...+.+.++|+.+|+..||..|.|++||++|-
T Consensus 233 s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 233 SNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred CcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 78889999999999999999999999999984
No 27
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-35 Score=298.82 Aligned_cols=249 Identities=22% Similarity=0.264 Sum_probs=195.6
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHH-HHHHHHHHhccC-cCCccceeeEEEcCC-ceeeeeecccCCC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKS-FLREVQVIGRTH-HKNLVQLLGFCIEQN-HQLLVYELMKNGT 520 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~-f~~E~~~l~~l~-H~niv~l~g~~~~~~-~~~lV~e~~~~gs 520 (725)
...+|++|+.|.....++. ||||++++....-++. =++|+..|++|. |||||+|..++.+.+ .+++|||||+. +
T Consensus 19 GDGTfGsV~la~~~~~~~~--VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-N 95 (538)
T KOG0661|consen 19 GDGTFGSVYLAKSKETGEL--VAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-N 95 (538)
T ss_pred cCCcceeEEEeeecCCCce--eeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-h
Confidence 4568999999999888764 8999997655443332 379999999998 999999999999988 99999999986 8
Q ss_pred hhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 521 LSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 521 L~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
|.+.+..+ +.+++..+..|+.||++||+|+|++ ++.|||+||+|||+.. ...+||+|||+||......
T Consensus 96 LYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~-------~~~iKiaDFGLARev~Skp- 164 (538)
T KOG0661|consen 96 LYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISG-------NDVIKIADFGLAREVRSKP- 164 (538)
T ss_pred HHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecc-------cceeEecccccccccccCC-
Confidence 99998765 6789999999999999999999999 9999999999999976 6789999999999875433
Q ss_pred ccccccccCccccchhccc-CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc-----ccCcchHHHHH--HH--H
Q 039817 600 RTSTMIRGTMGYMAPEWLR-NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL-----ANGMILTDWVL--YC--V 669 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~-~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~--~ 669 (725)
.-+..+.|.-|+|||++. .+.|+.+.|+|++||+++|+.+-++.|.+....++.. ........|.. .+ .
T Consensus 165 -PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~ 243 (538)
T KOG0661|consen 165 -PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASA 243 (538)
T ss_pred -CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHH
Confidence 234456889999999874 6789999999999999999999999887654322110 00000111111 00 0
Q ss_pred HcCCC-----------ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 670 RTGNL-----------GATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 670 ~~~~~-----------~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
..-.+ ......+..+++..|++.||.+|||++|++++-
T Consensus 244 mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 244 MNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred hccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 00111 113567889999999999999999999999874
No 28
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=302.46 Aligned_cols=242 Identities=28% Similarity=0.332 Sum_probs=201.5
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
-..|+|++.+... .-...||||.|+. +.-..++|+.|+.+|+.++|||+|+|+|+|..+..+|||+|||.+|+|.+|
T Consensus 277 GGQYGeVYeGvWK--kyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdY 353 (1157)
T KOG4278|consen 277 GGQYGEVYEGVWK--KYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDY 353 (1157)
T ss_pred CCcccceeeeeee--ccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHH
Confidence 3567888776533 3357899999965 345678999999999999999999999999999999999999999999999
Q ss_pred hccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 525 LFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 525 l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
|.+. ..++--..+.++.||++||.||..+ ++|||||.++|+|+.+ +..+||+||||++++..+.....
T Consensus 354 LRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgE-------nhiVKvADFGLsRlMtgDTYTAH 423 (1157)
T KOG4278|consen 354 LRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGE-------NHIVKVADFGLSRLMTGDTYTAH 423 (1157)
T ss_pred HHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccc-------cceEEeeccchhhhhcCCceecc
Confidence 9765 3456677889999999999999999 9999999999999988 88999999999999988876655
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhC-CcCCCCCCCCccccccCcchHHHHHHHHHcC---CCChhH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC-KRHTELHRVDEPTLANGMILTDWVLYCVRTG---NLGATK 678 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 678 (725)
....-++.|.|||-+....++.|+|||+|||+||||.|- -.|+..- . ...+..++.++ .-+...
T Consensus 424 AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----------d-lSqVY~LLEkgyRM~~PeGC 491 (1157)
T KOG4278|consen 424 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----------D-LSQVYGLLEKGYRMDGPEGC 491 (1157)
T ss_pred cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----------c-HHHHHHHHhccccccCCCCC
Confidence 444557789999999999999999999999999999984 4454322 1 22333333332 345577
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 679 FERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
++.+.+|++.||+.+|.+||++.|+-+.+|.+.
T Consensus 492 PpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 492 PPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred CHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 899999999999999999999999999887653
No 29
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.8e-34 Score=303.39 Aligned_cols=238 Identities=23% Similarity=0.236 Sum_probs=191.5
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..|+.++.+.+..+ +..+|+|.+.... ......+.+|++++++++||||+++++++..++..++||||+++++|.
T Consensus 6 G~~g~Vy~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 83 (323)
T cd05571 6 GTFGKVILVREKAT--GKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELF 83 (323)
T ss_pred CCCeEEEEEEECCC--CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHH
Confidence 34555666655444 3578888876432 233456889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+++.+.+.+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....... ..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~-------~~~~kl~DfG~a~~~~~~~~-~~ 152 (323)
T cd05571 84 FHLSRERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDK-------DGHIKITDFGLCKEGISDGA-TM 152 (323)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECC-------CCCEEEeeCCCCcccccCCC-cc
Confidence 9998888899999999999999999999999 9999999999999987 78899999999875322211 12
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERI 682 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 682 (725)
....|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ...... ......++....+.+
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------~~~~~~--~~~~~~~p~~~~~~~ 222 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELI--LMEEIRFPRTLSPEA 222 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--------HHHHHH--HcCCCCCCCCCCHHH
Confidence 2356899999999999999999999999999999999999998643211 011111 111223455667889
Q ss_pred HHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 683 TMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
.+++.+||+.||++|| ++.+++++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 223 KSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 9999999999999999 89999865
No 30
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-34 Score=300.91 Aligned_cols=231 Identities=27% Similarity=0.431 Sum_probs=185.7
Q ss_pred EEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC-CCCCHHHHHHHH
Q 039817 464 EVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIA 540 (725)
Q Consensus 464 ~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~ 540 (725)
.||||.|+-. ..+..+.|++|+.++++-+|.||+-+.|+|..... .||+.+|++.+|..+|+-. ..+...+...|+
T Consensus 416 dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIA 494 (678)
T KOG0193|consen 416 DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIA 494 (678)
T ss_pred ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHH
Confidence 6899988643 33456789999999999999999999999999888 9999999999999999866 578999999999
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC-CccccccccCccccchhcccC
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ-TRTSTMIRGTMGYMAPEWLRN 619 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~ 619 (725)
.|||.||.|||.+ +|||||||..||||.+ ++.|||+||||+..-..-. ........|...|||||++..
T Consensus 495 qQiaqGM~YLHAK---~IIHrDLKSnNIFl~~-------~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRm 564 (678)
T KOG0193|consen 495 QQIAQGMDYLHAK---NIIHRDLKSNNIFLHE-------DLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRM 564 (678)
T ss_pred HHHHHhhhhhhhh---hhhhhhccccceEEcc-------CCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhh
Confidence 9999999999999 9999999999999987 7899999999987543221 111222347889999999863
Q ss_pred ---CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc--cCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCC
Q 039817 620 ---APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA--NGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQP 694 (725)
Q Consensus 620 ---~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp 694 (725)
.+|++.+||||||+|+|||++|..|+.....+..... .+....+. ........+.|.+|+..||..++
T Consensus 565 qd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~-------s~~~s~~pk~mk~Ll~~C~~~~~ 637 (678)
T KOG0193|consen 565 QDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDL-------SKIRSNCPKAMKRLLSDCWKFDR 637 (678)
T ss_pred cccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccc-------hhhhccCHHHHHHHHHHHHhcCc
Confidence 4799999999999999999999999984333221111 11111111 11222456789999999999999
Q ss_pred CCCCCHHHHHHHhcCCCC
Q 039817 695 TLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 695 ~~RPs~~evl~~L~~~~~ 712 (725)
++||.+.+|+..|+.+..
T Consensus 638 ~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 638 EERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccCccHHHHHHHHHHhhh
Confidence 999999999998887764
No 31
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1e-33 Score=306.67 Aligned_cols=249 Identities=27% Similarity=0.365 Sum_probs=191.4
Q ss_pred ccccHHHHHHHhcc---cCCcceEEEEEEccccc-CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccC
Q 039817 444 KVFSYQELREATNV---FDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKN 518 (725)
Q Consensus 444 ~~~~~~~l~~a~~~---~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~ 518 (725)
...+|+.|++++.. ..+....||||.++... ....+.+.+|++++..+ +||||++++++|..++..++||||+++
T Consensus 44 G~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~ 123 (375)
T cd05104 44 GAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCY 123 (375)
T ss_pred cCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccC
Confidence 34567777777532 22345689999986432 33456789999999999 899999999999999999999999999
Q ss_pred CChhhhhccCC---------------------------------------------------------------------
Q 039817 519 GTLSAFLFRQE--------------------------------------------------------------------- 529 (725)
Q Consensus 519 gsL~~~l~~~~--------------------------------------------------------------------- 529 (725)
|+|.+++....
T Consensus 124 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (375)
T cd05104 124 GDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEI 203 (375)
T ss_pred CcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHH
Confidence 99999985421
Q ss_pred ------CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc-c
Q 039817 530 ------IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT-S 602 (725)
Q Consensus 530 ------~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~-~ 602 (725)
.+++..+.+++.|+++||.|||+. +|+||||||+|||++. +..+||+|||+++......... .
T Consensus 204 ~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~-------~~~~kl~DfG~a~~~~~~~~~~~~ 273 (375)
T cd05104 204 LEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTH-------GRITKICDFGLARDIRNDSNYVVK 273 (375)
T ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEEC-------CCcEEEecCccceeccCccccccc
Confidence 367888999999999999999998 9999999999999987 7789999999998654332211 1
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
....++..|+|||.+.+..++.++||||||+++|||++ |..|+....... ...+.+.... ....+...+.+
T Consensus 274 ~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~ 345 (375)
T cd05104 274 GNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-------KFYKMIKEGY-RMLSPECAPSE 345 (375)
T ss_pred CCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-------HHHHHHHhCc-cCCCCCCCCHH
Confidence 12235667999999999999999999999999999998 777765322111 1111111110 01122334578
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
+.+|+.+||+.||++||++.||+++|++.
T Consensus 346 l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 346 MYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 99999999999999999999999999864
No 32
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.2e-34 Score=296.75 Aligned_cols=240 Identities=24% Similarity=0.344 Sum_probs=198.6
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCc-eeeeeecccCCChhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNH-QLLVYELMKNGTLSA 523 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-~~lV~e~~~~gsL~~ 523 (725)
+..|+......+..++....++.+.+.......++...+|+.++++++|||||.+++.+.+++. .+|||+|++||+|.+
T Consensus 14 ~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~ 93 (426)
T KOG0589|consen 14 RGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQ 93 (426)
T ss_pred ccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHH
Confidence 3445555555554445444444445555556666788999999999999999999999999998 999999999999999
Q ss_pred hhccCC--CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 524 FLFRQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 524 ~l~~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+.+++ .++++++..++.|++.|+.|||++ .|+|||||+.|||++. +..+||+|||+|+.+..+....
T Consensus 94 ~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk-------~~~VkLgDfGlaK~l~~~~~~a 163 (426)
T KOG0589|consen 94 LIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTK-------DKKVKLGDFGLAKILNPEDSLA 163 (426)
T ss_pred HHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccc-------cCceeecchhhhhhcCCchhhh
Confidence 998764 579999999999999999999998 9999999999999987 7778999999999987765333
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATKF 679 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 679 (725)
....||+.||.||.+.+.+|..|+|||||||++|||++-+++|..... ...+..... -..++..+.
T Consensus 164 -~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m-----------~~Li~ki~~~~~~Plp~~ys 231 (426)
T KOG0589|consen 164 -STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM-----------SELILKINRGLYSPLPSMYS 231 (426)
T ss_pred -heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch-----------HHHHHHHhhccCCCCCcccc
Confidence 335699999999999999999999999999999999999999975432 222222222 245677888
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..++.++..|++.+|..||++.+++.+
T Consensus 232 ~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 232 SELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 999999999999999999999999876
No 33
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=9e-34 Score=292.81 Aligned_cols=248 Identities=22% Similarity=0.281 Sum_probs=194.5
Q ss_pred ccccHHHHHHHhccc-CCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 444 KVFSYQELREATNVF-DGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~-~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
...+|+.|++|+... ......||+|.++... ....+.|.+|+.++++++||||++++|++..++..++||||+++|+|
T Consensus 14 g~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 93 (266)
T cd05064 14 GTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGAL 93 (266)
T ss_pred cccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcH
Confidence 344567777766443 2356789999987542 23345799999999999999999999999999999999999999999
Q ss_pred hhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 522 SAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 522 ~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
.+++.+. ..+++..++.++.|++.||+|||+. +++||||||+||+++. ++.+|++|||.+.........
T Consensus 94 ~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~-------~~~~~l~dfg~~~~~~~~~~~ 163 (266)
T cd05064 94 DSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNS-------DLVCKISGFRRLQEDKSEAIY 163 (266)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcC-------CCcEEECCCcccccccccchh
Confidence 9999764 5789999999999999999999999 9999999999999987 789999999987654322211
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHH
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKF 679 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (725)
......++..|+|||.+.+..++.++||||||+++||+++ |+.|+...... ...+.+... .....+...+
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~-~~~~~~~~~~ 234 (266)
T cd05064 164 TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--------DVIKAVEDG-FRLPAPRNCP 234 (266)
T ss_pred cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCC-CCCCCCCCCC
Confidence 1112335678999999999999999999999999999875 88887543211 011111110 0112344566
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
..+.+++..||+.+|.+||++++|++.|+++
T Consensus 235 ~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 235 NLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 7899999999999999999999999999764
No 34
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-33 Score=285.04 Aligned_cols=252 Identities=27% Similarity=0.339 Sum_probs=188.4
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhc--cCcCCccceeeEEEcCC----ceeeeeecccCC
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGR--THHKNLVQLLGFCIEQN----HQLLVYELMKNG 519 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~lV~e~~~~g 519 (725)
..|+.|++|.- .++.||||++. .+..+.|.+|-++++. ++|+||+++++.-..+. +++||+||.++|
T Consensus 221 Grfg~V~KaqL----~~~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kG 293 (534)
T KOG3653|consen 221 GRFGCVWKAQL----DNRLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKG 293 (534)
T ss_pred Cccceeehhhc----cCceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCC
Confidence 34444444432 24789999994 5667889999999875 68999999999987655 889999999999
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcc------cCCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEE------CETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 520 sL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~------~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
||.+||. ...++|....+|+..+++||+|||+. .+|+|+|||||++||||.+ +++..|+|||||..
T Consensus 294 sL~dyL~-~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~-------DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 294 SLCDYLK-ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKN-------DLTCCIADFGLALR 365 (534)
T ss_pred cHHHHHH-hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEcc-------CCcEEeeccceeEE
Confidence 9999995 45689999999999999999999976 4578999999999999988 89999999999998
Q ss_pred cCcCCCcccc-ccccCccccchhcccCCC-CC-----CccceehhHHHHHHHHhCCcCCCCCCCCc------cccccCc-
Q 039817 594 LKKDQTRTST-MIRGTMGYMAPEWLRNAP-VT-----AKVDVYSFGVMLLEIIFCKRHTELHRVDE------PTLANGM- 659 (725)
Q Consensus 594 ~~~~~~~~~~-~~~gt~~y~aPE~~~~~~-~~-----~ksDv~S~G~vl~elltg~~~~~~~~~~~------~~~~~~~- 659 (725)
+......... ..+||.+|||||++.+.- +. .+.||||+|.|||||++.-.........+ ..+....
T Consensus 366 ~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt 445 (534)
T KOG3653|consen 366 LEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPT 445 (534)
T ss_pred ecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCC
Confidence 7654443322 356999999999997652 22 35899999999999998665443111000 0011111
Q ss_pred --chHHHHHHHHHcCCCCh-----hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 660 --ILTDWVLYCVRTGNLGA-----TKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 660 --~~~~~~~~~~~~~~~~~-----~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
.+.+.+.....+..++. ..+..+++.+..||..||+.|.|+.=|-+.+..+..
T Consensus 446 ~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~ 505 (534)
T KOG3653|consen 446 LEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM 505 (534)
T ss_pred HHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence 12222222222233332 456789999999999999999999888777766543
No 35
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.8e-34 Score=299.91 Aligned_cols=236 Identities=22% Similarity=0.227 Sum_probs=189.7
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
+|+.++++.+.-+ +..||+|.+... .......+.+|++++++++||||+++++++..++..++||||+++|+|.+
T Consensus 5 ~~g~Vy~~~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~ 82 (312)
T cd05585 5 SFGKVMQVRKRDT--QRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFH 82 (312)
T ss_pred CCeEEEEEEECCC--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHH
Confidence 4556666665433 457889987542 23445678899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 524 ~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
++.+...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++....... ...
T Consensus 83 ~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~-------~~~~kl~Dfg~~~~~~~~~~-~~~ 151 (312)
T cd05585 83 HLQREGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDY-------QGHIALCDFGLCKLNMKDDD-KTN 151 (312)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECC-------CCcEEEEECcccccCccCCC-ccc
Confidence 998888899999999999999999999999 9999999999999987 78999999999986433222 122
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCCCChhHHHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGNLGATKFERI 682 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 682 (725)
...||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .+....... ...++....+.+
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 220 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----------NEMYRKILQEPLRFPDGFDRDA 220 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----------HHHHHHHHcCCCCCCCcCCHHH
Confidence 34589999999999999999999999999999999999999864321 111111111 123445567789
Q ss_pred HHHHHHccCCCCCCCCC---HHHHHHH
Q 039817 683 TMVGLWCICPQPTLRPS---MKQVLQM 706 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs---~~evl~~ 706 (725)
.+++.+||+.||++||+ +.|++++
T Consensus 221 ~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 221 KDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 99999999999999975 5666654
No 36
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=9.6e-34 Score=306.68 Aligned_cols=250 Identities=27% Similarity=0.356 Sum_probs=192.6
Q ss_pred ccccHHHHHHHhcccC---CcceEEEEEEccccc-CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccC
Q 039817 444 KVFSYQELREATNVFD---GQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKN 518 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~---~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~ 518 (725)
....|+.++++.+.-. .....||||.+.... ......+.+|+++++++ +|+|||+++++|...+..++||||+++
T Consensus 47 G~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~ 126 (374)
T cd05106 47 GAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCY 126 (374)
T ss_pred cCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccC
Confidence 3456777777664322 234579999986533 23345688999999999 899999999999999999999999999
Q ss_pred CChhhhhccC----------------------------------------------------------------------
Q 039817 519 GTLSAFLFRQ---------------------------------------------------------------------- 528 (725)
Q Consensus 519 gsL~~~l~~~---------------------------------------------------------------------- 528 (725)
|+|.+++.+.
T Consensus 127 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (374)
T cd05106 127 GDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDS 206 (374)
T ss_pred CcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCC
Confidence 9999988532
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc-cccccc
Q 039817 529 EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT-STMIRG 607 (725)
Q Consensus 529 ~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~g 607 (725)
..+++..+.+++.|+++||.|||+. +|+||||||+|||++. ++.+||+|||+++......... .....+
T Consensus 207 ~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~-------~~~~kL~DfGla~~~~~~~~~~~~~~~~~ 276 (374)
T cd05106 207 WPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTD-------GRVAKICDFGLARDIMNDSNYVVKGNARL 276 (374)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeC-------CCeEEEeeceeeeeccCCcceeeccCCCC
Confidence 1367888999999999999999998 9999999999999987 7789999999998654332211 112235
Q ss_pred CccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHH
Q 039817 608 TMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVG 686 (725)
Q Consensus 608 t~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 686 (725)
+..|+|||++.+..++.++||||||+++|||++ |+.|+....... ........ ......+...+..+.+++
T Consensus 277 ~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~l~~li 348 (374)
T cd05106 277 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-------KFYKMVKR-GYQMSRPDFAPPEIYSIM 348 (374)
T ss_pred ccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-------HHHHHHHc-ccCccCCCCCCHHHHHHH
Confidence 668999999998899999999999999999997 998886432111 11111111 011122333467899999
Q ss_pred HHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 687 LWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 687 ~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
.+||+.||++|||+.+|+++|+++.
T Consensus 349 ~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 349 KMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHcCCChhhCcCHHHHHHHHHHHh
Confidence 9999999999999999999998753
No 37
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.6e-34 Score=296.92 Aligned_cols=237 Identities=25% Similarity=0.336 Sum_probs=200.5
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..+|+.+|++++..+. ..||+|.+.+. .....+.+++|++++++++|||||.++++|+...+.++|.||+.+ +|.
T Consensus 12 ~Gsfg~VYKgrrK~t~--~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~ 88 (808)
T KOG0597|consen 12 EGSFGRVYKGRRKYTI--QVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLF 88 (808)
T ss_pred CCccceeeecccccce--eEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHH
Confidence 4567777777776654 57889888643 334456789999999999999999999999999999999999987 999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
.+|...+.++++.+..|+.|++.||.|||+. +|+|||+||+|||++. .+.+|++|||+|+.+.... ...
T Consensus 89 ~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~-------~~~~KlcdFg~Ar~m~~~t-~vl 157 (808)
T KOG0597|consen 89 TILEQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEK-------GGTLKLCDFGLARAMSTNT-SVL 157 (808)
T ss_pred HHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecC-------CCceeechhhhhhhcccCc-eee
Confidence 9999999999999999999999999999999 9999999999999987 8999999999999876533 334
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc-CCCChhHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT-GNLGATKFER 681 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 681 (725)
+.+.||+-|||||...+++|+..+|.||+||++||+++|++||.... +.+.+...... ...+......
T Consensus 158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s-----------i~~Lv~~I~~d~v~~p~~~S~~ 226 (808)
T KOG0597|consen 158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS-----------ITQLVKSILKDPVKPPSTASSS 226 (808)
T ss_pred eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH-----------HHHHHHHHhcCCCCCcccccHH
Confidence 56789999999999999999999999999999999999999997432 12222222222 1234466778
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+++++.-.+++||.+|.|..+++.|
T Consensus 227 f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 227 FVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHHHHHHHhhcChhhcccHHHHhcC
Confidence 9999999999999999999999865
No 38
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.8e-33 Score=296.52 Aligned_cols=232 Identities=26% Similarity=0.383 Sum_probs=180.8
Q ss_pred CcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC----------
Q 039817 460 GQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ---------- 528 (725)
Q Consensus 460 ~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~---------- 528 (725)
+....||+|.+.... .....+|.+|++++.+++||||+++++++...+..++||||+++++|.+++...
T Consensus 44 ~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (304)
T cd05096 44 GRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGN 123 (304)
T ss_pred CcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccc
Confidence 445689999886532 334567999999999999999999999999999999999999999999988543
Q ss_pred ---------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 529 ---------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 529 ---------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
..+++..+.+++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.......
T Consensus 124 ~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH~dlkp~Nill~~-------~~~~kl~DfG~~~~~~~~~~ 193 (304)
T cd05096 124 DAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVHRDLATRNCLVGE-------NLTIKIADFGMSRNLYAGDY 193 (304)
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHHHHHC---CccccCcchhheEEcC-------CccEEECCCccceecccCce
Confidence 2367889999999999999999999 9999999999999987 78999999999986533222
Q ss_pred cc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCC--cCCCCCCCCccccccCcchHHHHHHHHHc-----
Q 039817 600 RT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK--RHTELHRVDEPTLANGMILTDWVLYCVRT----- 671 (725)
Q Consensus 600 ~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 671 (725)
.. .....++..|+|||++.++.++.++||||||+++|||+++. .|+...... ...+........
T Consensus 194 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~--------~~~~~~~~~~~~~~~~~ 265 (304)
T cd05096 194 YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE--------QVIENAGEFFRDQGRQV 265 (304)
T ss_pred eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH--------HHHHHHHHHhhhccccc
Confidence 11 12233577899999998889999999999999999999754 444422111 111111111111
Q ss_pred -CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 672 -GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 672 -~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
...+...++.+.+++.+||+.+|++|||+.||.+.|+.
T Consensus 266 ~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 266 YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 11223456789999999999999999999999999863
No 39
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.5e-34 Score=275.49 Aligned_cols=248 Identities=22% Similarity=0.246 Sum_probs=190.3
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..+|+.+.+..+.-+ ++.||||++.... +...+-.++|+++|++++|+|+|.|+.+|......+||+||++..-|+
T Consensus 12 EGSYGvV~KCrnk~T--gqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~ 89 (396)
T KOG0593|consen 12 EGSYGVVMKCRNKDT--GQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLH 89 (396)
T ss_pred cCcceEEEEeccCCc--ccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHHH
Confidence 445666666665544 4689999985432 233455789999999999999999999999999999999999986666
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+.-......+.+.+.+++.|++.|+.|+|++ ++|||||||+|||++. ++.+||+|||.|+.+... ...-
T Consensus 90 eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~-------~gvvKLCDFGFAR~L~~p-gd~Y 158 (396)
T KOG0593|consen 90 ELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQ-------NGVVKLCDFGFARTLSAP-GDNY 158 (396)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEec-------CCcEEeccchhhHhhcCC-cchh
Confidence 6655557789999999999999999999999 9999999999999988 899999999999987752 2233
Q ss_pred cccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc----cCcchHHHHHHHHHcC-----
Q 039817 603 TMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA----NGMILTDWVLYCVRTG----- 672 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~----- 672 (725)
+..+.|..|+|||.+.+ .+|....|||++||++.||++|.+.|.....-++-.. -+..+... ...+...
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prh-q~iF~~N~~F~G 237 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRH-QSIFSSNPFFHG 237 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHH-HHHhccCCceee
Confidence 44567889999999987 6899999999999999999999998876543221000 00011111 1111111
Q ss_pred -CCCh------------hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 673 -NLGA------------TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 673 -~~~~------------~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+|. .....+.+++..|++.||.+|++-+|++.+
T Consensus 238 v~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 238 VRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred eecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 0111 234568899999999999999999999854
No 40
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.6e-33 Score=292.05 Aligned_cols=246 Identities=23% Similarity=0.346 Sum_probs=191.9
Q ss_pred ccHHHHHHHhcccCC---cceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDG---QEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~---~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..++.++.+.....+ ....|++|.+.... ......|.+|++++++++||||+++++++...+..+++|||+++++|
T Consensus 16 G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L 95 (283)
T cd05048 16 GAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDL 95 (283)
T ss_pred ccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcH
Confidence 345556655543322 34578999886432 23456799999999999999999999999999999999999999999
Q ss_pred hhhhccC----------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEE
Q 039817 522 SAFLFRQ----------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKI 585 (725)
Q Consensus 522 ~~~l~~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl 585 (725)
.+++... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~-------~~~~~L 165 (283)
T cd05048 96 HEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGE-------GLTVKI 165 (283)
T ss_pred HHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcC-------CCcEEE
Confidence 9999654 3478889999999999999999999 9999999999999987 788999
Q ss_pred eeccCccccCcCCC-ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHH
Q 039817 586 ADFGLAKLLKKDQT-RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTD 663 (725)
Q Consensus 586 ~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~ 663 (725)
+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..|+...... ....
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--------~~~~ 237 (283)
T cd05048 166 SDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--------EVIE 237 (283)
T ss_pred CCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHH
Confidence 99999986533221 11223346788999999998899999999999999999998 88887643211 1111
Q ss_pred HHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 664 WVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
.+... .....+...+.++.+|+.+||+.||.+||+++||+++|+++
T Consensus 238 ~i~~~-~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 238 MIRSR-QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHcC-CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11110 01123445678999999999999999999999999999863
No 41
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=6.3e-33 Score=287.73 Aligned_cols=230 Identities=21% Similarity=0.361 Sum_probs=181.1
Q ss_pred CcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhcc-CCCCCHHHHHH
Q 039817 460 GQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR-QEIPTWDKRVE 538 (725)
Q Consensus 460 ~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~ 538 (725)
+....|++|.+.........+|.+|++++++++|+||++++++|..+...++||||+++|+|..++.+ ...+++..+..
T Consensus 42 ~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~ 121 (274)
T cd05076 42 GRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKIT 121 (274)
T ss_pred CeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHH
Confidence 44568999998765555566899999999999999999999999999999999999999999999965 46789999999
Q ss_pred HHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhccc
Q 039817 539 IALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR 618 (725)
Q Consensus 539 i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 618 (725)
++.|+++||+|||+. +|+||||||+||+++...........+|++|||++....... ...++..|+|||.+.
T Consensus 122 i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~-----~~~~~~~~~aPe~~~ 193 (274)
T cd05076 122 VAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSRE-----ERVERIPWIAPECVP 193 (274)
T ss_pred HHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCcccCccceeeecCCcccccccccc-----ccccCCcccCchhhc
Confidence 999999999999999 999999999999997632211223458999999886443221 123677899999887
Q ss_pred C-CCCCCccceehhHHHHHHHH-hCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCC
Q 039817 619 N-APVTAKVDVYSFGVMLLEII-FCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTL 696 (725)
Q Consensus 619 ~-~~~~~ksDv~S~G~vl~ell-tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~ 696 (725)
+ ..++.++||||||+++|||+ +|+.|+....... .... .......+......+.+++.+||+.+|++
T Consensus 194 ~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--------~~~~---~~~~~~~~~~~~~~~~~li~~cl~~~p~~ 262 (274)
T cd05076 194 GGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--------KERF---YEKKHRLPEPSCKELATLISQCLTYEPTQ 262 (274)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--------HHHH---HHhccCCCCCCChHHHHHHHHHcccChhh
Confidence 5 56899999999999999995 6777775432111 1111 11122333444567899999999999999
Q ss_pred CCCHHHHHHHhc
Q 039817 697 RPSMKQVLQMLE 708 (725)
Q Consensus 697 RPs~~evl~~L~ 708 (725)
|||+.+|++.|+
T Consensus 263 Rps~~~il~~L~ 274 (274)
T cd05076 263 RPSFRTILRDLT 274 (274)
T ss_pred CcCHHHHHHhhC
Confidence 999999999874
No 42
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.6e-33 Score=297.78 Aligned_cols=239 Identities=23% Similarity=0.230 Sum_probs=191.0
Q ss_pred ccHHHHHHHhccc-CCcceEEEEEEcccc----cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 446 FSYQELREATNVF-DGQEVEVAVKQLEKV----TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 446 ~~~~~l~~a~~~~-~~~~~~vavk~l~~~----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
.+|++++.+.+.. ...+..||||.++.. .......+.+|++++++++||||+++++.+..++..++||||+++++
T Consensus 7 G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 86 (323)
T cd05584 7 GGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 86 (323)
T ss_pred cCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCch
Confidence 3455555554432 234578999988642 12334567899999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|.+++.+...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.......
T Consensus 87 L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~-------~~~~kl~Dfg~~~~~~~~~~- 155 (323)
T cd05584 87 LFMHLEREGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDA-------QGHVKLTDFGLCKESIHEGT- 155 (323)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECC-------CCCEEEeeCcCCeecccCCC-
Confidence 999998888889999999999999999999999 9999999999999987 78999999999875432221
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH-HcCCCChhHH
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV-RTGNLGATKF 679 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 679 (725)
......|+..|+|||++.+..++.++||||||+++|||++|+.||..... ........ ....++....
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-----------~~~~~~~~~~~~~~~~~~~ 224 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-----------KKTIDKILKGKLNLPPYLT 224 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----------HHHHHHHHcCCCCCCCCCC
Confidence 12234589999999999988899999999999999999999999864321 11111111 1223445567
Q ss_pred HHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
+.+.+++.+|++.+|++|| ++.+++++
T Consensus 225 ~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 225 PEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 7899999999999999999 88888775
No 43
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.9e-33 Score=285.77 Aligned_cols=245 Identities=24% Similarity=0.317 Sum_probs=193.1
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
..|+.++++.....+.+..+|+|.++... ....++|.+|+.++++++|+||+++++++. .+..++||||+++++|.+
T Consensus 6 G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~ 84 (257)
T cd05116 6 GNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNK 84 (257)
T ss_pred cCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHH
Confidence 34566666654444556789999886433 234568999999999999999999999985 456789999999999999
Q ss_pred hhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc--
Q 039817 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT-- 601 (725)
Q Consensus 524 ~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~-- 601 (725)
++.+...+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||+++.........
T Consensus 85 ~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~-------~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 85 FLQKNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVT-------QHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcC-------CCeEEECCCccccccCCCCCeeee
Confidence 998778899999999999999999999998 9999999999999987 7789999999998765433211
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFE 680 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (725)
.....++..|+|||.+....++.++||||||+++|||++ |+.|+...... ...+.+.. ......+...++
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~i~~-~~~~~~~~~~~~ 225 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--------EVTQMIES-GERMECPQRCPP 225 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHC-CCCCCCCCCCCH
Confidence 112234578999999988889999999999999999998 88888643211 11111111 111234445678
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 681 RITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
.+.+++.+||+.||++||++++|++.|++.
T Consensus 226 ~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 226 EMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 899999999999999999999999999864
No 44
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.8e-33 Score=290.72 Aligned_cols=248 Identities=21% Similarity=0.232 Sum_probs=187.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.++.++++.+..+ +..+|+|.+... .....+.+.+|++++++++|+||+++++++..++..++||||++++.|..+
T Consensus 13 ~~~~v~~~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~ 90 (287)
T cd07848 13 AYGVVLKCRHKET--KEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELL 90 (287)
T ss_pred CCEEEEEEEECCC--CcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHH
Confidence 4455555555433 456888887643 233456788999999999999999999999999999999999999888766
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
......+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||++.............
T Consensus 91 ~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~-------~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (287)
T cd07848 91 EEMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISH-------NDVLKLCDFGFARNLSEGSNANYTE 160 (287)
T ss_pred HhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcC-------CCcEEEeeccCcccccccccccccc
Confidence 65556789999999999999999999998 9999999999999987 7899999999998764433322333
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc--c--cCcchHHHHHHHHHcC--------
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL--A--NGMILTDWVLYCVRTG-------- 672 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~-------- 672 (725)
..|+..|+|||.+.+..++.++||||||+++|||++|+.||.......... . ......+.........
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd07848 161 YVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFP 240 (287)
T ss_pred cccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccC
Confidence 558999999999998889999999999999999999999986532211000 0 0000000000000000
Q ss_pred ----------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 673 ----------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 673 ----------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
......+..+.+++.+||+.||++|||++|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 241 AVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0011235579999999999999999999999875
No 45
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=7.2e-33 Score=294.83 Aligned_cols=237 Identities=24% Similarity=0.264 Sum_probs=190.6
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
+|+.++.+.+..+ +..||+|.+... .......+.+|++++++++||||+++++++..++..++||||+++|+|.+
T Consensus 7 ~~g~Vy~~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~ 84 (328)
T cd05593 7 TFGKVILVREKAS--GKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFF 84 (328)
T ss_pred CCEEEEEEEECCC--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHH
Confidence 4455555554433 457889988643 23345678899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 524 ~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
++.....+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....... ...
T Consensus 85 ~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~-------~~~~kL~DfG~~~~~~~~~~-~~~ 153 (328)
T cd05593 85 HLSRERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDK-------DGHIKITDFGLCKEGITDAA-TMK 153 (328)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECC-------CCcEEEecCcCCccCCCccc-ccc
Confidence 998888899999999999999999999999 9999999999999987 78999999999875432211 122
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERIT 683 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 683 (725)
...|+..|+|||.+.+..++.++||||||+++|||++|+.||....... ..... ......++......+.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~--------~~~~~--~~~~~~~p~~~~~~~~ 223 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--------LFELI--LMEDIKFPRTLSADAK 223 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH--------HHHHh--ccCCccCCCCCCHHHH
Confidence 3468999999999999899999999999999999999999986432111 00000 0112234556678899
Q ss_pred HHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 684 MVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 684 ~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
+++.+||+.||++|| ++.|++++
T Consensus 224 ~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 224 SLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 999999999999997 89999876
No 46
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.2e-32 Score=330.13 Aligned_cols=226 Identities=27% Similarity=0.516 Sum_probs=178.1
Q ss_pred cceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHH
Q 039817 461 QEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540 (725)
Q Consensus 461 ~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~ 540 (725)
.+..||||.+...... ..+|++.+++++|||||+++|+|.+++..++||||+++|+|.+++. .++|..+.+|+
T Consensus 714 ~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~ 786 (968)
T PLN00113 714 NGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR---NLSWERRRKIA 786 (968)
T ss_pred CCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh---cCCHHHHHHHH
Confidence 3568899988643322 2356889999999999999999999999999999999999999995 38999999999
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCC
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 620 (725)
.|+|+||+|||..+.++|+||||||+||+++. +..+++. |+......... ...++..|+|||++.+.
T Consensus 787 ~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~-------~~~~~~~-~~~~~~~~~~~-----~~~~t~~y~aPE~~~~~ 853 (968)
T PLN00113 787 IGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG-------KDEPHLR-LSLPGLLCTDT-----KCFISSAYVAPETRETK 853 (968)
T ss_pred HHHHHHHHHhccCCCCCeecCCCCHHhEEECC-------CCceEEE-eccccccccCC-----CccccccccCcccccCC
Confidence 99999999999777779999999999999987 5566664 66554332211 12478899999999999
Q ss_pred CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--------------cCCCChhHHHHHHHHH
Q 039817 621 PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--------------TGNLGATKFERITMVG 686 (725)
Q Consensus 621 ~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~~l~ 686 (725)
.++.|+||||||+++|||++|+.|++..... .....+|...... ....+.....++.+++
T Consensus 854 ~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 927 (968)
T PLN00113 854 DITEKSDIYGFGLILIELLTGKSPADAEFGV------HGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLA 927 (968)
T ss_pred CCCcccchhhHHHHHHHHHhCCCCCCcccCC------CCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHH
Confidence 9999999999999999999999998533211 1122233222111 0112335566788999
Q ss_pred HHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 687 LWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 687 ~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
.+||+.+|++||||+||+++|+++.+
T Consensus 928 ~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 928 LHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred HhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 99999999999999999999998754
No 47
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=292.67 Aligned_cols=242 Identities=24% Similarity=0.311 Sum_probs=200.6
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEccc-ccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~-~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
+.+.+|++|++|.++..++. ||+|.+.- ......+.+.+|+.++++++|+||.++||.+..+..++++||||.+|++
T Consensus 21 IgrGsfG~Vyk~~d~~t~k~--vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv 98 (467)
T KOG0201|consen 21 IGRGSFGEVYKAIDNKTKKV--VAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSV 98 (467)
T ss_pred ccccccceeeeeeeccccce--EEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcch
Confidence 35678999999999887765 55555532 2344567889999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+.|.....+.+....-|+.++..||.|||.+ +.+|||||+.|||+.. .+.+|++|||.+-.........
T Consensus 99 ~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~-------~g~vkl~DfgVa~ql~~~~~rr 168 (467)
T KOG0201|consen 99 LDLLKSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSE-------SGDVKLADFGVAGQLTNTVKRR 168 (467)
T ss_pred hhhhccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEec-------cCcEEEEecceeeeeechhhcc
Confidence 99998888778889999999999999999999 9999999999999987 7899999999998776665554
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
..++||+.|||||+++...|+.|+||||||++.+||.+|.+|+.....-.- ..+. .......+.......
T Consensus 169 -~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv-----lflI----pk~~PP~L~~~~S~~ 238 (467)
T KOG0201|consen 169 -KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV-----LFLI----PKSAPPRLDGDFSPP 238 (467)
T ss_pred -ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE-----EEec----cCCCCCccccccCHH
Confidence 456799999999999988999999999999999999999999875443110 0000 000011222255667
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+++++..||++||+.||++.+++++
T Consensus 239 ~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 239 FKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HHHHHHHHhhcCcccCcCHHHHhhh
Confidence 9999999999999999999999875
No 48
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=8.1e-33 Score=284.14 Aligned_cols=243 Identities=21% Similarity=0.336 Sum_probs=192.1
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccC-ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
...|+.++.+.....+.+..||+|.+..... ...+.|.+|+.++++++|+||+++++++. ....++||||+++++|.+
T Consensus 5 ~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~ 83 (257)
T cd05115 5 SGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLNK 83 (257)
T ss_pred CCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHH
Confidence 3456667766655555667899998865432 33467999999999999999999999885 457899999999999999
Q ss_pred hhcc-CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 524 FLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 524 ~l~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
++.. ...+++..+.+++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++...........
T Consensus 84 ~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~-------~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 84 FLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVN-------QHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcC-------CCcEEeccCCccccccCCcccee
Confidence 9975 45789999999999999999999999 9999999999999987 78899999999986544332211
Q ss_pred --cccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHc---CCCCh
Q 039817 603 --TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRT---GNLGA 676 (725)
Q Consensus 603 --~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 676 (725)
....++..|+|||.+....++.++||||||+++||+++ |..|+..... .+. ...... ...+.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----------~~~-~~~~~~~~~~~~~~ 221 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG-----------PEV-MSFIEQGKRLDCPA 221 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH-----------HHH-HHHHHCCCCCCCCC
Confidence 11224578999999988889999999999999999996 8888764321 111 111111 22334
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
...+.+.+++..||+.+|++||++.+|.+.|+..
T Consensus 222 ~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 222 ECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 5578899999999999999999999999999864
No 49
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.3e-32 Score=283.74 Aligned_cols=241 Identities=27% Similarity=0.342 Sum_probs=189.9
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhcc
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR 527 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~ 527 (725)
++.++++... ..+..|++|.+... ....+++.+|++++++++|+||+++++++..++..++||||+++++|.+++..
T Consensus 19 ~~~v~~~~~~--~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 95 (263)
T cd05052 19 YGEVYEGVWK--KYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE 95 (263)
T ss_pred cceEEEEEEe--cCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHh
Confidence 4444444433 23457889988643 34467899999999999999999999999999999999999999999999865
Q ss_pred C--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 528 Q--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 528 ~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
. ..+++..+..++.|+++||+|||+. +++||||||+||++++ ++.+||+|||++..............
T Consensus 96 ~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~-------~~~~kl~df~~~~~~~~~~~~~~~~~ 165 (263)
T cd05052 96 CNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGE-------NHLVKVADFGLSRLMTGDTYTAHAGA 165 (263)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcC-------CCcEEeCCCccccccccceeeccCCC
Confidence 4 4589999999999999999999998 9999999999999987 78899999999987654332222222
Q ss_pred ccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHH
Q 039817 606 RGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITM 684 (725)
Q Consensus 606 ~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 684 (725)
..+..|+|||.+.+..++.++||||||+++|||++ |..|+....... ........ .....+...+..+.+
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~ 236 (263)
T cd05052 166 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------VYELLEKG-YRMERPEGCPPKVYE 236 (263)
T ss_pred CCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--------HHHHHHCC-CCCCCCCCCCHHHHH
Confidence 34568999999998999999999999999999998 777775332110 11111110 012334455678999
Q ss_pred HHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 685 VGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 685 l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
++.+||+.+|++||++.+++++|+.+
T Consensus 237 li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 237 LMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHccCCcccCCCHHHHHHHHHhh
Confidence 99999999999999999999999864
No 50
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=7.1e-33 Score=294.34 Aligned_cols=236 Identities=23% Similarity=0.239 Sum_probs=189.9
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
.|+.++.+.+..+ +..||+|.+... .......+.+|++++++++||||+++++.+...+..++||||+++|+|.+
T Consensus 7 ~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~ 84 (323)
T cd05595 7 TFGKVILVREKAT--GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFF 84 (323)
T ss_pred CCEEEEEEEECCC--CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHH
Confidence 4555555554433 457888888643 22344567889999999999999999999999999999999999999999
Q ss_pred hhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 524 ~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
++.+...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....... ...
T Consensus 85 ~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~-------~~~~kL~Dfg~~~~~~~~~~-~~~ 153 (323)
T cd05595 85 HLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDK-------DGHIKITDFGLCKEGISDGA-TMK 153 (323)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcC-------CCCEEecccHHhccccCCCC-ccc
Confidence 998888899999999999999999999999 9999999999999987 78999999999875322211 122
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHH-HHcCCCChhHHHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYC-VRTGNLGATKFERI 682 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 682 (725)
...|+..|+|||.+.+..++.++||||||+++|||++|+.|+...... ...... .....++....+.+
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----------~~~~~~~~~~~~~p~~~~~~~ 222 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----------RLFELILMEEIRFPRTLSPEA 222 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-----------HHHHHHhcCCCCCCCCCCHHH
Confidence 345899999999999999999999999999999999999998643211 111111 11223455667889
Q ss_pred HHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 683 TMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
.+++.+||+.||++|| ++.+++++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 223 KSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 9999999999999998 88888765
No 51
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9e-33 Score=289.30 Aligned_cols=230 Identities=27% Similarity=0.440 Sum_probs=188.1
Q ss_pred cceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC------------
Q 039817 461 QEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ------------ 528 (725)
Q Consensus 461 ~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~------------ 528 (725)
....+++|.+........+.+.+|++++++++|+||+++++++...+..++||||+++++|.+++...
T Consensus 34 ~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 113 (291)
T cd05094 34 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 113 (291)
T ss_pred cceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCccccccccccc
Confidence 34678999987665556678999999999999999999999999999999999999999999998643
Q ss_pred ----CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-ccc
Q 039817 529 ----EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR-TST 603 (725)
Q Consensus 529 ----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~-~~~ 603 (725)
..+++..++.++.|++.||+|||+. +++||||||+||+++. ++.+||+|||+++........ ...
T Consensus 114 ~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~-------~~~~~l~dfg~a~~~~~~~~~~~~~ 183 (291)
T cd05094 114 RQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGA-------NLLVKIGDFGMSRDVYSTDYYRVGG 183 (291)
T ss_pred ccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc-------CCcEEECCCCcccccCCCceeecCC
Confidence 2378999999999999999999999 9999999999999987 789999999999765432211 122
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCC---CChhHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGN---LGATKF 679 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 679 (725)
...++..|+|||.+.+..++.++||||||+++|||++ |+.|+....... .......+. .+...+
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------------~~~~~~~~~~~~~~~~~~ 251 (291)
T cd05094 184 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE------------VIECITQGRVLERPRVCP 251 (291)
T ss_pred CCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------------HHHHHhCCCCCCCCccCC
Confidence 2346788999999999999999999999999999999 888875432110 111112221 223456
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
..+.+++.+||+.+|++||++.+|+++|+++.+
T Consensus 252 ~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 252 KEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 789999999999999999999999999998754
No 52
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-33 Score=309.51 Aligned_cols=251 Identities=23% Similarity=0.290 Sum_probs=200.4
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccC-cCCccceeeE-EEc------CCceeeeeec
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTH-HKNLVQLLGF-CIE------QNHQLLVYEL 515 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~-~~~------~~~~~lV~e~ 515 (725)
...+|..|+.|.+...+ ..+|+|++-..++.+.+..++||++|++|+ |+|||.+++. ... .-+.+|+|||
T Consensus 46 AEGGFa~VYla~~~~~~--~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEy 123 (738)
T KOG1989|consen 46 AEGGFAQVYLAQDVKGG--KKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEY 123 (738)
T ss_pred ccCCcEEEEEEEecCCC--ceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhh
Confidence 34567777878777665 788999987778888899999999999997 9999999994 321 1367899999
Q ss_pred ccCCChhhhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 516 MKNGTLSAFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 516 ~~~gsL~~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
|++|+|-|++..+ ..|++.++++|+.|+++|+++||. +.++|||||||.+||||+. ++..||||||.+..
T Consensus 124 C~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~-------~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 124 CKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSA-------DGNYKLCDFGSATT 195 (738)
T ss_pred ccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcC-------CCCEEeCccccccc
Confidence 9999999999754 569999999999999999999998 4778999999999999988 88999999999875
Q ss_pred cCcCCCcccc--------ccccCccccchhcc---cCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchH
Q 039817 594 LKKDQTRTST--------MIRGTMGYMAPEWL---RNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILT 662 (725)
Q Consensus 594 ~~~~~~~~~~--------~~~gt~~y~aPE~~---~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~ 662 (725)
.......... ...-|+.|+|||.+ .+..+++|+|||+|||+||-|+....||+....... +. .
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI-ln-----g 269 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI-LN-----G 269 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE-Ee-----c
Confidence 4322211110 12368999999987 477899999999999999999999999986522110 00 0
Q ss_pred HHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCCCC
Q 039817 663 DWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVP 716 (725)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~p 716 (725)
.+ .-.....+..+|.+||+.||+.||.+||++-||+..+-.+...+.|
T Consensus 270 ~Y------~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~ 317 (738)
T KOG1989|consen 270 NY------SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCP 317 (738)
T ss_pred cc------cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCC
Confidence 00 0112247889999999999999999999999999999877654433
No 53
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-33 Score=293.54 Aligned_cols=245 Identities=24% Similarity=0.374 Sum_probs=208.1
Q ss_pred cccHHHHHHHhc--ccCCcceEEEEEEccc-ccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 445 VFSYQELREATN--VFDGQEVEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 445 ~~~~~~l~~a~~--~~~~~~~~vavk~l~~-~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
...|+++++++- -..|+...||||.-+. ...+..+.|++|..+|++++|||||+|+|+|.+. ..+||||.++-|-|
T Consensus 399 ~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmEL~~~GEL 477 (974)
T KOG4257|consen 399 EGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVMELAPLGEL 477 (974)
T ss_pred CCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEecccchhH
Confidence 345777777653 3357788999999875 4455678899999999999999999999999765 67899999999999
Q ss_pred hhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 522 SAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 522 ~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
..||..+ ..++......++.|++.||+|||+. .+|||||..+|||+.. ...+|++||||++.+..+...
T Consensus 478 r~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsS-------p~CVKLaDFGLSR~~ed~~yY 547 (974)
T KOG4257|consen 478 REYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSS-------PQCVKLADFGLSRYLEDDAYY 547 (974)
T ss_pred HHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecC-------cceeeecccchhhhccccchh
Confidence 9999876 5789999999999999999999999 9999999999999987 778999999999999887777
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccc--cccCcchHHHHHHHHHcCCCChh
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPT--LANGMILTDWVLYCVRTGNLGAT 677 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 677 (725)
..+...-+..|||||.+.-.+++.+||||-|||.+||+++ |..||......+-. ++++ .+.+.|..
T Consensus 548 kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG-----------eRlP~P~n 616 (974)
T KOG4257|consen 548 KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG-----------ERLPCPPN 616 (974)
T ss_pred hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCC-----------CCCCCCCC
Confidence 6666667889999999999999999999999999999985 88899876544311 1111 12356778
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 678 KFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
.++.+..|+.+||..||.+||++.|+...|+.+.
T Consensus 617 CPp~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 617 CPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred CChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 8999999999999999999999999998886654
No 54
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.1e-32 Score=286.96 Aligned_cols=242 Identities=26% Similarity=0.425 Sum_probs=192.9
Q ss_pred ccHHHHHHHhcccC---CcceEEEEEEcccccCc-cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFD---GQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~---~~~~~vavk~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.+++.++.++.... .....|+||.+...... ..+.|.+|++++++++|+||+++++++..+...++||||+++++|
T Consensus 16 g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 95 (280)
T cd05049 16 GAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDL 95 (280)
T ss_pred cCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCH
Confidence 45566666654332 34568999998765443 457899999999999999999999999999999999999999999
Q ss_pred hhhhccC--------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEee
Q 039817 522 SAFLFRQ--------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIAD 587 (725)
Q Consensus 522 ~~~l~~~--------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~D 587 (725)
.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|
T Consensus 96 ~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~-------~~~~kl~d 165 (280)
T cd05049 96 NKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGY-------DLVVKIGD 165 (280)
T ss_pred HHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcC-------CCeEEECC
Confidence 9999643 2468889999999999999999999 9999999999999987 78999999
Q ss_pred ccCccccCcCCC-ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHH
Q 039817 588 FGLAKLLKKDQT-RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWV 665 (725)
Q Consensus 588 fgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 665 (725)
||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..|+...... + .
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-----------~-~ 233 (280)
T cd05049 166 FGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-----------E-V 233 (280)
T ss_pred cccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----------H-H
Confidence 999975433221 11122335678999999999999999999999999999998 88887543211 1 1
Q ss_pred HHHHHcCC---CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 666 LYCVRTGN---LGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 666 ~~~~~~~~---~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
......+. .+...+..+.+++.+||+.||++||++.||++.|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 234 IECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 11111222 233556789999999999999999999999999863
No 55
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.3e-32 Score=293.20 Aligned_cols=234 Identities=23% Similarity=0.214 Sum_probs=190.1
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..+|+.++.+.+..+ +..||+|.+... .....+.+.+|++++++++||||+++++++..++..++||||+++++|
T Consensus 28 ~G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 105 (329)
T PTZ00263 28 TGSFGRVRIAKHKGT--GEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGEL 105 (329)
T ss_pred ecCCeEEEEEEECCC--CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChH
Confidence 345556666655443 357888887542 223456789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++.+...+++.....++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 106 ~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~-------~~~~kl~Dfg~~~~~~~~~--- 172 (329)
T PTZ00263 106 FTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDN-------KGHVKVTDFGFAKKVPDRT--- 172 (329)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECC-------CCCEEEeeccCceEcCCCc---
Confidence 99998888899999999999999999999999 9999999999999987 7899999999998654322
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC--CCChhHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG--NLGATKF 679 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 679 (725)
....|++.|+|||.+.+..++.++||||||+++|||++|+.||...... + .......+ .++....
T Consensus 173 -~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-----------~-~~~~i~~~~~~~p~~~~ 239 (329)
T PTZ00263 173 -FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF-----------R-IYEKILAGRLKFPNWFD 239 (329)
T ss_pred -ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH-----------H-HHHHHhcCCcCCCCCCC
Confidence 2245899999999999999999999999999999999999998643210 0 11111122 2334456
Q ss_pred HHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRPS-----MKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs-----~~evl~~ 706 (725)
..+.+++.+||+.||++||+ ++++++|
T Consensus 240 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 240 GRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 78899999999999999996 7888866
No 56
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=5.7e-33 Score=290.33 Aligned_cols=245 Identities=27% Similarity=0.444 Sum_probs=194.0
Q ss_pred ccHHHHHHHhccc---CCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVF---DGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~---~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
.+|+.++.+.... .+....+++|.+........+.+.+|++++++++|+||+++++++...+..++||||+++++|.
T Consensus 16 G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (288)
T cd05093 16 GAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 95 (288)
T ss_pred cCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHH
Confidence 3455555554321 2345678999987665556678999999999999999999999999999999999999999999
Q ss_pred hhhccCC-------------CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeecc
Q 039817 523 AFLFRQE-------------IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFG 589 (725)
Q Consensus 523 ~~l~~~~-------------~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfg 589 (725)
+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++. ++.+||+|||
T Consensus 96 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~-------~~~~kl~dfg 165 (288)
T cd05093 96 KFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGE-------NLLVKIGDFG 165 (288)
T ss_pred HHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc-------CCcEEeccCC
Confidence 9986432 489999999999999999999999 9999999999999987 7899999999
Q ss_pred CccccCcCCC-ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHH
Q 039817 590 LAKLLKKDQT-RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLY 667 (725)
Q Consensus 590 la~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (725)
+++....... .......++..|+|||.+.+..++.++||||||++++||++ |..|+...... + ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~-----------~-~~~ 233 (288)
T cd05093 166 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-----------E-VIE 233 (288)
T ss_pred ccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----------H-HHH
Confidence 9986543221 11122335678999999998899999999999999999998 77777533211 1 111
Q ss_pred HHHcCC---CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 668 CVRTGN---LGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 668 ~~~~~~---~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
....+. .+...+..+.+++.+||+.+|.+|||+.+|++.|+++..
T Consensus 234 ~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 234 CITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 111221 223456789999999999999999999999999988754
No 57
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=9.8e-33 Score=285.03 Aligned_cols=248 Identities=24% Similarity=0.347 Sum_probs=195.6
Q ss_pred ccccHHHHHHHhcccC-CcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 444 KVFSYQELREATNVFD-GQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~-~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
...+|+.+++|..... ++...|+||.+.... ......|.+|+.++++++|+||+++++++..++..++||||+++++|
T Consensus 13 g~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L 92 (266)
T cd05033 13 GGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSL 92 (266)
T ss_pred cCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCH
Confidence 3455667777765444 345689999886533 33456799999999999999999999999999999999999999999
Q ss_pred hhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 522 SAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 522 ~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
.+++... ..+++..+..++.|++.||.|||+. +|+|+||||+||+++. ++.+||+|||+++........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~-------~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd05033 93 DKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNS-------NLVCKVSDFGLSRRLEDSEAT 162 (266)
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcC-------CCCEEECccchhhcccccccc
Confidence 9999764 4689999999999999999999998 9999999999999987 788999999999977522211
Q ss_pred -cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhH
Q 039817 601 -TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATK 678 (725)
Q Consensus 601 -~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (725)
......++..|+|||.+.+..++.++||||||++++||++ |..|+...... ...+...... ....+...
T Consensus 163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~-~~~~~~~~ 233 (266)
T cd05033 163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--------DVIKAVEDGY-RLPPPMDC 233 (266)
T ss_pred eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--------HHHHHHHcCC-CCCCCCCC
Confidence 1112335678999999998899999999999999999998 88877432111 1111111100 11223345
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 679 FERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
++.+.+++.+|++.+|++||+++||+++|+++
T Consensus 234 ~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 234 PSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 67899999999999999999999999999875
No 58
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.3e-33 Score=297.55 Aligned_cols=237 Identities=23% Similarity=0.226 Sum_probs=190.2
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..|+.+++|.+.-++ ..||||.+.... ....+.+.+|++++.+++||||+++++++..++..++||||+++++|.
T Consensus 12 G~~g~Vy~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (333)
T cd05600 12 GGYGQVFLAKKKDTG--EIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFR 89 (333)
T ss_pred cCCeEEEEEEECCCC--CEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHH
Confidence 345666666654433 578999886432 234567889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++.... ..
T Consensus 90 ~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~-------~~~~kL~Dfg~a~~~~~----~~ 155 (333)
T cd05600 90 TLLNNLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDA-------SGHIKLTDFGLSKGIVT----YA 155 (333)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECC-------CCCEEEEeCcCCccccc----cc
Confidence 9998888899999999999999999999999 9999999999999987 78999999999986543 12
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHH---HHcCCCC---h
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYC---VRTGNLG---A 676 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~ 676 (725)
....|++.|+|||.+.+..++.++||||||+++|||++|+.|+....... ....+... ....... .
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~ 227 (333)
T cd05600 156 NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE--------TWENLKYWKETLQRPVYDDPRF 227 (333)
T ss_pred CCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH--------HHHHHHhccccccCCCCCcccc
Confidence 23458999999999999999999999999999999999999986432211 00001000 0001111 1
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...+.+.+++.+|++.+|.+||++++++++
T Consensus 228 ~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 228 NLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 346788999999999999999999999987
No 59
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-33 Score=286.54 Aligned_cols=247 Identities=22% Similarity=0.227 Sum_probs=187.1
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccC--------------ccHHHHHHHHHHHhccCcCCccceeeEEEc--CC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTG--------------DGEKSFLREVQVIGRTHHKNLVQLLGFCIE--QN 507 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~--------------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~ 507 (725)
....|+.|+.|.+.-++ ..||||.+.+... ...+..++|+.+|++++|+|||+|+.+..+ .+
T Consensus 106 G~G~yGkVkLar~~~~~--~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~ 183 (576)
T KOG0585|consen 106 GSGQYGKVKLARDEVDG--KLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESD 183 (576)
T ss_pred cCCccceEEEEeecCCC--cEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccC
Confidence 34556666666665444 5788888754211 112478899999999999999999999876 46
Q ss_pred ceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEee
Q 039817 508 HQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIAD 587 (725)
Q Consensus 508 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~D 587 (725)
..|||+|||..|.+...-.....+++.+..+++.+++.||.|||.+ +||||||||+|+||++ ++++||+|
T Consensus 184 ~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~-------~g~VKIsD 253 (576)
T KOG0585|consen 184 KLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSS-------DGTVKISD 253 (576)
T ss_pred ceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcC-------CCcEEeec
Confidence 8999999999988765543334489999999999999999999999 9999999999999988 89999999
Q ss_pred ccCccccCcCCCc----cccccccCccccchhcccCCC----CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCc
Q 039817 588 FGLAKLLKKDQTR----TSTMIRGTMGYMAPEWLRNAP----VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGM 659 (725)
Q Consensus 588 fgla~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~----~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~ 659 (725)
||.+..+...... ......||+.|+|||...++. ...+.||||+||+||.|+.|+.||.....-
T Consensus 254 FGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~-------- 325 (576)
T KOG0585|consen 254 FGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL-------- 325 (576)
T ss_pred cceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH--------
Confidence 9999876322111 122356999999999987632 356799999999999999999999754211
Q ss_pred chHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 660 ILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
.+.+-+......-....+..+.+.+|++++|++||++|.+..+|..|.--.
T Consensus 326 ~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 326 ELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred HHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 111111111111112224678999999999999999999999999887433
No 60
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.3e-33 Score=296.87 Aligned_cols=235 Identities=23% Similarity=0.236 Sum_probs=191.3
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
...|++++.|...-. ....||+|.+... .....+.+.+|++++++++||||+++++++..++..++||||+++|+|
T Consensus 40 ~G~~g~Vy~a~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L 118 (340)
T PTZ00426 40 TGSFGRVILATYKNE-DFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEF 118 (340)
T ss_pred ecCCeEEEEEEEECC-CCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcH
Confidence 345666666654322 2357899988542 223456788999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++.+...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 119 ~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~-------~~~ikL~DFG~a~~~~~~---- 184 (340)
T PTZ00426 119 FTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDK-------DGFIKMTDFGFAKVVDTR---- 184 (340)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECC-------CCCEEEecCCCCeecCCC----
Confidence 99998888899999999999999999999999 9999999999999987 789999999999865432
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCChhHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGATKF 679 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 679 (725)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.|+...... ........ ..++....
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~------------~~~~~i~~~~~~~p~~~~ 252 (340)
T PTZ00426 185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL------------LIYQKILEGIIYFPKFLD 252 (340)
T ss_pred cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH------------HHHHHHhcCCCCCCCCCC
Confidence 12345899999999999888999999999999999999999999643211 01111111 22344556
Q ss_pred HHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
+.+.+++.+|++.||++|+ ++++++++
T Consensus 253 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 253 NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 7789999999999999995 89999887
No 61
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3e-33 Score=292.78 Aligned_cols=235 Identities=20% Similarity=0.194 Sum_probs=191.2
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..+|+.++++.+..++ ..||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++||||+++++|
T Consensus 11 ~G~~g~Vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 88 (291)
T cd05612 11 TGTFGRVHLVRDRISE--HYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGEL 88 (291)
T ss_pred cCCCeEEEEEEEcCCC--CEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCH
Confidence 3456667776665443 568888875322 23456688999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++...+.+++.....++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~-------~~~~kl~Dfg~~~~~~~~~--- 155 (291)
T cd05612 89 FSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDK-------EGHIKLTDFGFAKKLRDRT--- 155 (291)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECC-------CCCEEEEecCcchhccCCc---
Confidence 99998888899999999999999999999999 9999999999999987 7899999999998654321
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH-HcCCCChhHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV-RTGNLGATKFE 680 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 680 (725)
....|++.|+|||.+.+..++.++||||||+++|||++|+.|+...... +...... ....++.....
T Consensus 156 -~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-----------~~~~~i~~~~~~~~~~~~~ 223 (291)
T cd05612 156 -WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-----------GIYEKILAGKLEFPRHLDL 223 (291)
T ss_pred -ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHHhCCcCCCccCCH
Confidence 2245899999999999989999999999999999999999998643211 1111111 11234445567
Q ss_pred HHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 039817 681 RITMVGLWCICPQPTLRPS-----MKQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs-----~~evl~~ 706 (725)
.+.+++.+||+.||.+||+ +++++++
T Consensus 224 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 224 YAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 8999999999999999995 8998877
No 62
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.6e-32 Score=292.83 Aligned_cols=247 Identities=21% Similarity=0.302 Sum_probs=189.4
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.+|+.++++.+..++ ..+|+|.+... .....+.+.+|++++++++|+||+++++++..++..++||||+++++|.++
T Consensus 16 G~~g~V~~~~~~~~~--~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 93 (331)
T cd06649 16 GNGGVVTKVQHKPSG--LIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 93 (331)
T ss_pred CCCEEEEEEEECCCC--cEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHH
Confidence 345555555554433 56788877543 223456799999999999999999999999999999999999999999999
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
+.+...+++..+..++.|++.||.|||+. .+|+||||||+||+++. ++.+||+|||++....... ...
T Consensus 94 l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~-------~~~~kl~Dfg~~~~~~~~~---~~~ 161 (331)
T cd06649 94 LKEAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNS-------RGEIKLCDFGVSGQLIDSM---ANS 161 (331)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcC-------CCcEEEccCcccccccccc---ccc
Confidence 98888899999999999999999999985 15999999999999987 7889999999987653322 123
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc--c---------------------------
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT--L--------------------------- 655 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~--~--------------------------- 655 (725)
..|+..|+|||.+.+..++.++||||||+++|||++|+.|+......+.. .
T Consensus 162 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (331)
T cd06649 162 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVS 241 (331)
T ss_pred CCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccccc
Confidence 45899999999999999999999999999999999999998643211000 0
Q ss_pred ------ccCcchHHHHHHHHHcCCC----ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 656 ------ANGMILTDWVLYCVRTGNL----GATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 656 ------~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
.......+... ....... .......+++|+.+||+.||++|||++|++++-
T Consensus 242 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 242 GHGMDSRPAMAIFELLD-YIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred ccccccccchhHHHHHH-HHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 00000001111 1111111 113467899999999999999999999999874
No 63
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=264.44 Aligned_cols=241 Identities=22% Similarity=0.328 Sum_probs=198.2
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
...|+.+++..+.-+|++..+++..+.+....+.+++.+|+++.+.|+|||||+|.....+.+..+||+|+|+++.|..-
T Consensus 21 kG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~e 100 (355)
T KOG0033|consen 21 KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 100 (355)
T ss_pred cCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHH
Confidence 45577778877777776655444444444556788899999999999999999999999999999999999999999887
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
+-.+...++...-+...||+++|.|.|.+ +|||||+||+|++|..+. ...-+||+|||+|...+.. ..-..
T Consensus 101 IV~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~----~~A~vKL~~FGvAi~l~~g--~~~~G 171 (355)
T KOG0033|consen 101 IVAREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKA----KGAAVKLADFGLAIEVNDG--EAWHG 171 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeecc----CCCceeecccceEEEeCCc--ccccc
Confidence 76666678888999999999999999999 999999999999997742 3567899999999987722 22234
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCC------hhH
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG------ATK 678 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 678 (725)
..||++|||||++...+|+..+|||+-||+||-|+.|..||..+.. ..+.+.+..+.+. ...
T Consensus 172 ~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~------------~rlye~I~~g~yd~~~~~w~~i 239 (355)
T KOG0033|consen 172 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------------HRLYEQIKAGAYDYPSPEWDTV 239 (355)
T ss_pred ccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH------------HHHHHHHhccccCCCCcccCcC
Confidence 6699999999999999999999999999999999999999975432 1233333334332 245
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 679 FERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.++.++|+++||..||.+|.|+.|.+++
T Consensus 240 s~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 240 TPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 7889999999999999999999998865
No 64
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.5e-32 Score=284.29 Aligned_cols=243 Identities=28% Similarity=0.380 Sum_probs=191.5
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc-cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
.+|+.++++...-++....+++|.+... .....+.+.+|++++.++ +||||+++++++...+..++||||+++++|.+
T Consensus 6 g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (270)
T cd05047 6 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 85 (270)
T ss_pred CCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHH
Confidence 4566777777666666678899988643 234456799999999999 89999999999999999999999999999999
Q ss_pred hhccCC----------------CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEee
Q 039817 524 FLFRQE----------------IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIAD 587 (725)
Q Consensus 524 ~l~~~~----------------~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~D 587 (725)
++.... .+++.++..++.|++.||+|||+. +++|+||||+||+++. ++.+||+|
T Consensus 86 ~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~-------~~~~kl~d 155 (270)
T cd05047 86 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGE-------NYVAKIAD 155 (270)
T ss_pred HHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcC-------CCeEEECC
Confidence 986532 468899999999999999999998 9999999999999987 78999999
Q ss_pred ccCccccCcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHH
Q 039817 588 FGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVL 666 (725)
Q Consensus 588 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (725)
||++...... ........+..|+|||++....++.++||||||++++||++ |..|+...... +...
T Consensus 156 fgl~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----------~~~~ 222 (270)
T cd05047 156 FGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----------ELYE 222 (270)
T ss_pred CCCccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----------HHHH
Confidence 9998632211 11111224567999999988889999999999999999997 88887532211 1111
Q ss_pred HHHH--cCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 667 YCVR--TGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 667 ~~~~--~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
.... ....+......+.+++.+|++.+|.+|||+.++++.|+.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 223 KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1111 11223344567899999999999999999999999998764
No 65
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=9.6e-33 Score=300.15 Aligned_cols=251 Identities=24% Similarity=0.313 Sum_probs=192.4
Q ss_pred ccccHHHHHHHhcccC---CcceEEEEEEcccccC-ccHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccC
Q 039817 444 KVFSYQELREATNVFD---GQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKN 518 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~---~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~ 518 (725)
...+|+.|+++++.-. .....||||.+..... ...+.|.+|+++++++. ||||++++++|.+.+..+|||||+++
T Consensus 46 G~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~ 125 (400)
T cd05105 46 GSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFY 125 (400)
T ss_pred cCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCC
Confidence 3455667776665322 2235799999965332 33467999999999996 99999999999999999999999999
Q ss_pred CChhhhhccC----------------------------------------------------------------------
Q 039817 519 GTLSAFLFRQ---------------------------------------------------------------------- 528 (725)
Q Consensus 519 gsL~~~l~~~---------------------------------------------------------------------- 528 (725)
|+|.+++.+.
T Consensus 126 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (400)
T cd05105 126 GDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQR 205 (400)
T ss_pred CcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhccc
Confidence 9999987542
Q ss_pred --------------------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCc
Q 039817 529 --------------------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYI 582 (725)
Q Consensus 529 --------------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~ 582 (725)
..+++..+..++.|+++||.|||+. +|+|+||||+|||++. ++.
T Consensus 206 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~-------~~~ 275 (400)
T cd05105 206 SNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ-------GKI 275 (400)
T ss_pred CcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC-------CCE
Confidence 1367788899999999999999998 9999999999999987 778
Q ss_pred eEEeeccCccccCcCCCcc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcc
Q 039817 583 TKIADFGLAKLLKKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMI 660 (725)
Q Consensus 583 ~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~ 660 (725)
+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|+.....+. .
T Consensus 276 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~-------~ 348 (400)
T cd05105 276 VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS-------T 348 (400)
T ss_pred EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH-------H
Confidence 9999999998654332211 122346778999999998899999999999999999997 888876432111 0
Q ss_pred hHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 661 LTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
....+... .....+...+..+.+++.+||+.+|++||++.+|.++|+.+.+
T Consensus 349 ~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 349 FYNKIKSG-YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHHHHhcC-CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 00111100 0112233456789999999999999999999999999997653
No 66
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.5e-32 Score=282.59 Aligned_cols=242 Identities=28% Similarity=0.392 Sum_probs=193.9
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
..+++++.|...- +..+++|.+..........+.+|++++++++|+||+++++++...+..++||||+++++|.+++
T Consensus 17 g~~~~vy~~~~~~---~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 93 (261)
T cd05148 17 GYFGEVWEGLWKN---RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFL 93 (261)
T ss_pred CCCccEEEeEecC---CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHH
Confidence 3445555555433 5678999987665556778999999999999999999999999999999999999999999999
Q ss_pred ccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 526 FRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 526 ~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
.+. ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++.......... .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~-------~~~~kl~d~g~~~~~~~~~~~~-~ 162 (261)
T cd05148 94 RSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGE-------DLVCKVADFGLARLIKEDVYLS-S 162 (261)
T ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcC-------CceEEEccccchhhcCCccccc-c
Confidence 764 4689999999999999999999998 9999999999999987 7889999999998664332221 2
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERI 682 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 682 (725)
...++..|+|||.+.+..++.++||||||+++++|++ |+.|+...... ......... .....+...++.+
T Consensus 163 ~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~ 233 (261)
T cd05148 163 DKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--------EVYDQITAG-YRMPCPAKCPQEI 233 (261)
T ss_pred CCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHHHHhC-CcCCCCCCCCHHH
Confidence 2335678999999988899999999999999999998 77777543211 111111111 1123344567889
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
.+++.+|++.+|++|||++++++.|+.+
T Consensus 234 ~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 234 YKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 9999999999999999999999999864
No 67
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.3e-32 Score=279.37 Aligned_cols=240 Identities=23% Similarity=0.363 Sum_probs=187.2
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
..|+.++.+... +...+++|.+... ....+.|.+|++++++++||||+++++++..++..++||||+++|+|.+++
T Consensus 15 G~~~~vy~~~~~---~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~ 90 (256)
T cd05114 15 GQFGVVHLGKWR---AQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYL 90 (256)
T ss_pred CcCceEEEEEec---cCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHH
Confidence 344555555332 2346899987643 334578999999999999999999999999999999999999999999998
Q ss_pred ccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 526 FRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 526 ~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++............
T Consensus 91 ~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~-------~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 91 RQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSS-------TGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred HhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcC-------CCeEEECCCCCccccCCCceeccCC
Confidence 754 5689999999999999999999999 9999999999999987 7889999999988654333222222
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHH
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERIT 683 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 683 (725)
..++..|+|||.+.+..++.++||||||+++|||++ |+.|+...... .....+.... ....+......+.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--------~~~~~i~~~~-~~~~~~~~~~~~~ 231 (256)
T cd05114 161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--------EVVEMISRGF-RLYRPKLASMTVY 231 (256)
T ss_pred CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHCCC-CCCCCCCCCHHHH
Confidence 335668999999998889999999999999999999 78877533211 1111111100 1112334556789
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 684 MVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 684 ~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
+++.+||+.+|++||+++++++.|.
T Consensus 232 ~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 232 EVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHHHHHccCCcccCcCHHHHHHhhC
Confidence 9999999999999999999999874
No 68
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=5e-32 Score=279.06 Aligned_cols=228 Identities=21% Similarity=0.385 Sum_probs=178.6
Q ss_pred ceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC-CCCCHHHHHHHH
Q 039817 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIA 540 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~ 540 (725)
...|++|.+..........|.+|+.++++++||||+++++++..+...++||||+++++|..++.+. ..+++..+..++
T Consensus 32 ~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~ 111 (262)
T cd05077 32 EIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVA 111 (262)
T ss_pred ceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHH
Confidence 4578999887655555668999999999999999999999999999999999999999999998754 568999999999
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhccc-C
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR-N 619 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~ 619 (725)
.|+++||+|||+. +|+||||||+|||++.+.........+|++|||++....... ...++..|+|||.+. +
T Consensus 112 ~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~-----~~~~~~~y~aPE~~~~~ 183 (262)
T cd05077 112 KQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQ-----ECVERIPWIAPECVEDS 183 (262)
T ss_pred HHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcc-----cccccccccChhhhcCC
Confidence 9999999999999 999999999999997633211223348999999987553221 234678899999887 4
Q ss_pred CCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCC
Q 039817 620 APVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRP 698 (725)
Q Consensus 620 ~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP 698 (725)
..++.++||||||+++|||++ |..|+......+ ..... ...........+.+.+|+.+||+.||++||
T Consensus 184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---------~~~~~--~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp 252 (262)
T cd05077 184 KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE---------KERFY--EGQCMLVTPSCKELADLMTHCMNYDPNQRP 252 (262)
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH---------HHHHH--hcCccCCCCChHHHHHHHHHHcCCChhhCc
Confidence 678999999999999999984 666654321110 00000 011122233457789999999999999999
Q ss_pred CHHHHHHHhc
Q 039817 699 SMKQVLQMLE 708 (725)
Q Consensus 699 s~~evl~~L~ 708 (725)
++.+|+++|+
T Consensus 253 ~~~~il~~~~ 262 (262)
T cd05077 253 FFRAIMRDIN 262 (262)
T ss_pred CHHHHHHhcC
Confidence 9999999874
No 69
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.9e-32 Score=284.51 Aligned_cols=238 Identities=24% Similarity=0.276 Sum_probs=188.0
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
+|++++++....+ +..||+|.+.... ......+.+|++++++++|+||+++++.+.+++..++||||+++|+|.+
T Consensus 12 ~~g~V~~~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~ 89 (285)
T cd05631 12 GFGEVCACQVRAT--GKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKF 89 (285)
T ss_pred CCEEEEEEEEecC--CceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHH
Confidence 4555555554433 3578888875422 2334568899999999999999999999999999999999999999998
Q ss_pred hhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 524 FLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 524 ~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++........
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~-------~~~~kl~Dfg~~~~~~~~~~-- 157 (285)
T cd05631 90 HIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDD-------RGHIRISDLGLAVQIPEGET-- 157 (285)
T ss_pred HHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECC-------CCCEEEeeCCCcEEcCCCCe--
Confidence 88643 4689999999999999999999999 9999999999999987 78899999999986543221
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATKF 679 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 679 (725)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.||....... ..+.+..... ....+....
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--------~~~~~~~~~~~~~~~~~~~~s 229 (285)
T cd05631 158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV--------KREEVDRRVKEDQEEYSEKFS 229 (285)
T ss_pred ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch--------hHHHHHHHhhcccccCCccCC
Confidence 123458999999999999999999999999999999999999997543211 0111111111 123344567
Q ss_pred HHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRPS-----MKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs-----~~evl~~ 706 (725)
+.+.+|+.+||+.||++||+ +++++++
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 230 EDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred HHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 78999999999999999997 8888875
No 70
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=8.7e-33 Score=291.11 Aligned_cols=247 Identities=28% Similarity=0.378 Sum_probs=193.8
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccc-cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
...+|+.+++|.+..++....+++|.+... .....+.|.+|++++.++ +|+||+++++++..++..++||||+++++|
T Consensus 16 g~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 95 (303)
T cd05088 16 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 95 (303)
T ss_pred cCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcH
Confidence 345677888888776777778899987643 233456789999999999 899999999999999999999999999999
Q ss_pred hhhhccCC----------------CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEE
Q 039817 522 SAFLFRQE----------------IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKI 585 (725)
Q Consensus 522 ~~~l~~~~----------------~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl 585 (725)
.+++.+.. .+++..+..++.|++.||+|||+. +++||||||+|||++. ++.+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~-------~~~~kl 165 (303)
T cd05088 96 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGE-------NYVAKI 165 (303)
T ss_pred HHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecC-------CCcEEe
Confidence 99996542 468899999999999999999998 9999999999999987 788999
Q ss_pred eeccCccccCcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHH
Q 039817 586 ADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDW 664 (725)
Q Consensus 586 ~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 664 (725)
+|||+++...... .......+..|+|||++.+..++.++||||||++++||++ |..|+....... ..+.
T Consensus 166 ~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------~~~~ 235 (303)
T cd05088 166 ADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--------LYEK 235 (303)
T ss_pred CccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH--------HHHH
Confidence 9999986432111 1111224567999999988889999999999999999998 888875332110 1111
Q ss_pred HHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 665 VLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 665 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
+.... ....+...+..+.+++.+|++.+|++||++++++++|+.+.
T Consensus 236 ~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 236 LPQGY-RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred HhcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11000 11122335678899999999999999999999999987653
No 71
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.5e-32 Score=292.28 Aligned_cols=237 Identities=23% Similarity=0.254 Sum_probs=189.2
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
+|+.++.+.+..+ +..||+|.+... .......+.+|++++.+++|+||+++++++..++..++||||+++|+|.+
T Consensus 7 ~~g~V~~~~~~~~--~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~ 84 (325)
T cd05594 7 TFGKVILVKEKAT--GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFF 84 (325)
T ss_pred CCEEEEEEEECCC--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHH
Confidence 4455555554433 457888888643 22334567899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCHHHHHHHHHHHHHHhhhhhc-ccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 524 FLFRQEIPTWDKRVEIALGIARGLLYLHE-ECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 524 ~l~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
++.+...+++..+..++.|++.||.|||+ . +|+||||||+|||++. ++.+||+|||+++........ .
T Consensus 85 ~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~-------~~~~kL~Dfg~~~~~~~~~~~-~ 153 (325)
T cd05594 85 HLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDK-------DGHIKITDFGLCKEGIKDGAT-M 153 (325)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECC-------CCCEEEecCCCCeecCCCCcc-c
Confidence 99888889999999999999999999997 6 8999999999999987 789999999998754322211 2
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERI 682 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 682 (725)
....|+..|+|||.+.+..++.++||||||+++|||++|+.||....... ..... ......++....+.+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~--------~~~~i--~~~~~~~p~~~~~~~ 223 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--------LFELI--LMEEIRFPRTLSPEA 223 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHH--------HHHHH--hcCCCCCCCCCCHHH
Confidence 23458999999999999999999999999999999999999986432110 01111 111223445567789
Q ss_pred HHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 683 TMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
.+++.+||+.||++|+ ++.+++++
T Consensus 224 ~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 224 KSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 9999999999999996 89999876
No 72
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.9e-32 Score=279.92 Aligned_cols=244 Identities=25% Similarity=0.330 Sum_probs=194.7
Q ss_pred ccHHHHHHHhccc-CCcceEEEEEEcccccC-ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 446 FSYQELREATNVF-DGQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 446 ~~~~~l~~a~~~~-~~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
.+++.++++...- .+....||||.+..... ...+.|.+|++++++++|+||+++++.+.. ...++||||+++++|.+
T Consensus 6 g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~ 84 (257)
T cd05040 6 GSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLD 84 (257)
T ss_pred cCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHH
Confidence 4566677776544 34456799999976555 566789999999999999999999999988 88999999999999999
Q ss_pred hhccCC--CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-
Q 039817 524 FLFRQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR- 600 (725)
Q Consensus 524 ~l~~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~- 600 (725)
++.+.. .+++.....++.|++.||+|||+. +++|+||||+||+++. ++.+||+|||+++........
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~-------~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 85 RLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLAS-------DDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred HHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEec-------CCEEEeccccccccccccccce
Confidence 997654 689999999999999999999999 9999999999999987 789999999999876442221
Q ss_pred -cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhH
Q 039817 601 -TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATK 678 (725)
Q Consensus 601 -~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (725)
......++..|+|||++.+..++.++||||||++++||++ |+.|+...... ...............+...
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 226 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--------QILKKIDKEGERLERPEAC 226 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHhcCCcCCCCccC
Confidence 1112446788999999998899999999999999999998 99887532211 0111111111111223345
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 679 FERITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
+..+.+++.+|++.+|++||++.++++.|.
T Consensus 227 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 227 PQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 678999999999999999999999999886
No 73
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.2e-33 Score=295.63 Aligned_cols=234 Identities=21% Similarity=0.214 Sum_probs=186.8
Q ss_pred cHHHHHHHhcccC-CcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFD-GQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~-~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
+|++++.+.+... ..+..+|+|.+.... ......+.+|++++++++||||+++++++..++..++||||+++++|.+
T Consensus 8 ~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 87 (318)
T cd05582 8 SFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT 87 (318)
T ss_pred CCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHH
Confidence 4455555544332 345688999886432 2234567889999999999999999999999999999999999999999
Q ss_pred hhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 524 ~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
++.+...+++..+..++.|+++||.|||+. +|+||||||+||+++. ++.+||+|||+++....... ...
T Consensus 88 ~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~-------~~~~kL~Dfg~~~~~~~~~~-~~~ 156 (318)
T cd05582 88 RLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDE-------EGHIKLTDFGLSKESIDHEK-KAY 156 (318)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECC-------CCcEEEeeccCCcccCCCCC-cee
Confidence 998888899999999999999999999999 9999999999999987 78899999999986543322 122
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH-HcCCCChhHHHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV-RTGNLGATKFERI 682 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l 682 (725)
...|+..|+|||.+.+..++.++||||||+++|||++|+.|+...... +...... ....++....+.+
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-----------~~~~~i~~~~~~~p~~~~~~~ 225 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-----------ETMTMILKAKLGMPQFLSPEA 225 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-----------HHHHHHHcCCCCCCCCCCHHH
Confidence 345899999999999888999999999999999999999998643211 1111111 1223445567789
Q ss_pred HHHHHHccCCCCCCCCCHHH
Q 039817 683 TMVGLWCICPQPTLRPSMKQ 702 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~e 702 (725)
.+++.+||+.||++||++.+
T Consensus 226 ~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 226 QSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHhhcCHhHcCCCCC
Confidence 99999999999999999444
No 74
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.4e-32 Score=303.75 Aligned_cols=238 Identities=20% Similarity=0.208 Sum_probs=187.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
.++.++.|.+..+. +..|++|.+..........+.+|++++++++|||||++++++..++..+|||||+++|+|.+++.
T Consensus 79 ~~g~vy~a~~~~~~-~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~ 157 (478)
T PTZ00267 79 PTTAAFVATRGSDP-KEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIK 157 (478)
T ss_pred CCcEEEEEEEcCCC-CeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHH
Confidence 34445555544432 24567776654444445678899999999999999999999999999999999999999998875
Q ss_pred c----CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-c
Q 039817 527 R----QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR-T 601 (725)
Q Consensus 527 ~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~-~ 601 (725)
. ...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.+...... .
T Consensus 158 ~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~-------~~~~kL~DFgla~~~~~~~~~~~ 227 (478)
T PTZ00267 158 QRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMP-------TGIIKLGDFGFSKQYSDSVSLDV 227 (478)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECC-------CCcEEEEeCcCceecCCcccccc
Confidence 4 34678899999999999999999998 9999999999999987 789999999999876443221 1
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCChhHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGATKF 679 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 679 (725)
.....||+.|+|||++.+..++.++||||||+++|||++|+.|+..... .+........ ...+....
T Consensus 228 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----------~~~~~~~~~~~~~~~~~~~s 296 (478)
T PTZ00267 228 ASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----------REIMQQVLYGKYDPFPCPVS 296 (478)
T ss_pred ccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhCCCCCCCccCC
Confidence 2335689999999999999999999999999999999999999864321 1111111111 12333556
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..+.+++.+||+.+|++||++.+++.+
T Consensus 297 ~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 297 SGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 789999999999999999999998753
No 75
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.3e-32 Score=280.18 Aligned_cols=242 Identities=23% Similarity=0.316 Sum_probs=189.8
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
..++.++.|... ....|++|.+... ....+.+.+|+.++++++|+||+++++.+...+..++||||+++++|.+++
T Consensus 17 g~~g~v~~~~~~---~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 92 (261)
T cd05072 17 GQFGEVWMGYYN---NSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFL 92 (261)
T ss_pred cCCceEEEEEec---CCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHH
Confidence 344555555432 2346899987643 234678999999999999999999999999999999999999999999999
Q ss_pred ccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 526 FRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 526 ~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
.+. ..+++..+..++.|+++||+|||+. +++|+||||+||+++. ++.+||+|||++............
T Consensus 93 ~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~-------~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05072 93 KSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSE-------SLMCKIADFGLARVIEDNEYTARE 162 (261)
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecC-------CCcEEECCCccceecCCCceeccC
Confidence 654 5678999999999999999999998 9999999999999987 788999999999876543322222
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERI 682 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 682 (725)
...++..|+|||++....++.++||||||+++|||++ |+.|+...... .....+.... ........+..+
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~ 233 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--------DVMSALQRGY-RMPRMENCPDEL 233 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--------HHHHHHHcCC-CCCCCCCCCHHH
Confidence 2335678999999998889999999999999999998 88887532111 0111111110 111223456789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
.+++.+|++.+|++||+++++.+.|+.+
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 234 YDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 9999999999999999999999999863
No 76
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.2e-32 Score=285.10 Aligned_cols=246 Identities=22% Similarity=0.327 Sum_probs=191.0
Q ss_pred cccHHHHHHHhcccC--CcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 445 VFSYQELREATNVFD--GQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~--~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..+|+.+++|+.... .....|++|.+.... .+....|.+|++++++++|+||+++++++..++..++||||+++++|
T Consensus 15 ~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 94 (283)
T cd05090 15 ECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDL 94 (283)
T ss_pred ccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcH
Confidence 345667777764332 245689999987433 23346789999999999999999999999999999999999999999
Q ss_pred hhhhccC-----------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceE
Q 039817 522 SAFLFRQ-----------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITK 584 (725)
Q Consensus 522 ~~~l~~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~k 584 (725)
.+++... ..+++.....++.|++.||.|||+. +++|+||||+||+++. ++.+|
T Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~-------~~~~k 164 (283)
T cd05090 95 HEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGE-------QLHVK 164 (283)
T ss_pred HHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcC-------CCcEE
Confidence 9998532 2468889999999999999999999 9999999999999987 77899
Q ss_pred EeeccCccccCcCCC-ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchH
Q 039817 585 IADFGLAKLLKKDQT-RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILT 662 (725)
Q Consensus 585 l~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~ 662 (725)
|+|||+++....... .......++..|+|||++.+..++.++||||||++++||++ |..|+...... ...
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~--------~~~ 236 (283)
T cd05090 165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ--------EVI 236 (283)
T ss_pred eccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--------HHH
Confidence 999999986543321 11222335678999999988889999999999999999998 77777532210 111
Q ss_pred HHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 663 DWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
+.+... .....+...++.+.+++.+|++.+|++||++.+|.++|.+
T Consensus 237 ~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 237 EMVRKR-QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111110 0112233456789999999999999999999999999874
No 77
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.9e-32 Score=278.93 Aligned_cols=242 Identities=28% Similarity=0.347 Sum_probs=190.4
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
..++.++++... ....|++|.++.. ....++|.+|++++++++|+||+++++++...+..++||||+++++|.+++
T Consensus 17 g~~~~v~~~~~~---~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 92 (261)
T cd05068 17 GQFGEVWEGLWN---NTTPVAVKTLKPG-TMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYL 92 (261)
T ss_pred cCCccEEEEEec---CCeEEEEEeeCCC-cccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHH
Confidence 345556655432 2357899998653 334678999999999999999999999999999999999999999999999
Q ss_pred ccCC--CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 526 FRQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 526 ~~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
.... .+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++...........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~-------~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05068 93 QGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGE-------NNICKVADFGLARVIKEDIYEARE 162 (261)
T ss_pred hccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcC-------CCCEEECCcceEEEccCCcccccC
Confidence 7653 689999999999999999999999 9999999999999987 788999999999876533222122
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERI 682 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 682 (725)
....+..|+|||++.+..++.++||||||++++||++ |+.|+...... .......... ....+...++.+
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~ 233 (261)
T cd05068 163 GAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--------EVLQQVDQGY-RMPCPPGCPKEL 233 (261)
T ss_pred CCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCC-CCCCCCcCCHHH
Confidence 2223457999999998899999999999999999999 88777532110 0111111100 112334456889
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
.+++.+|++.+|++||++.++++.|+.+
T Consensus 234 ~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 234 YDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 9999999999999999999999999863
No 78
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2e-32 Score=281.41 Aligned_cols=246 Identities=22% Similarity=0.347 Sum_probs=189.8
Q ss_pred cccHHHHHHHhcccCC-----cceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCC
Q 039817 445 VFSYQELREATNVFDG-----QEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~-----~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 519 (725)
...|+.|+++.+.-.+ ....+++|.+........++|.+|+.++++++|||++++++++..++..++||||+++|
T Consensus 5 ~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g 84 (258)
T cd05078 5 QGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFG 84 (258)
T ss_pred cccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCC
Confidence 4457778877764432 23467888876555555678999999999999999999999999999999999999999
Q ss_pred ChhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCcccc-CCCCceEEeeccCccccCcC
Q 039817 520 TLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITI-DNNYITKIADFGLAKLLKKD 597 (725)
Q Consensus 520 sL~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~-~~~~~~kl~Dfgla~~~~~~ 597 (725)
+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.+.... .....+|++|||++......
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~ 161 (258)
T cd05078 85 SLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK 161 (258)
T ss_pred cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccccccCCc
Confidence 999999765 4589999999999999999999999 999999999999998742110 11234799999998754322
Q ss_pred CCccccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCCh
Q 039817 598 QTRTSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676 (725)
Q Consensus 598 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (725)
....++..|+|||++.+. .++.++||||||+++|||++|..++...... ............++.
T Consensus 162 -----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~ 226 (258)
T cd05078 162 -----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS----------QKKLQFYEDRHQLPA 226 (258)
T ss_pred -----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH----------HHHHHHHHccccCCC
Confidence 223477889999999864 5789999999999999999996443221110 011111112234555
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
.....+.+++.+||+.+|++|||++++++.|+
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 227 PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 56678999999999999999999999999874
No 79
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.5e-32 Score=261.40 Aligned_cols=263 Identities=22% Similarity=0.262 Sum_probs=197.8
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.+.+|+.|++|++..++ ..||||+++... ........+|++.|+.++|+||+.|++.+.+.+...||+|||+. +|
T Consensus 11 GEG~~gvVyka~d~~t~--~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-dL 87 (318)
T KOG0659|consen 11 GEGTYGVVYKARDTETG--KRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT-DL 87 (318)
T ss_pred cCcceEEEEEEEecCCC--cEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-cH
Confidence 34567777778776655 468888886432 22345688999999999999999999999999999999999986 89
Q ss_pred hhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 522 SAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 522 ~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
+..+..+ ..++..++..++.++++||+|||++ .|+||||||.|+|++. ++.+||+|||+++.+......
T Consensus 88 e~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~-------~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 88 EVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISS-------DGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred HHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcC-------CCcEEeecccchhccCCCCcc
Confidence 9999776 5678899999999999999999999 9999999999999988 899999999999998765443
Q ss_pred cccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCcc--------------ccccCcchHHHH
Q 039817 601 TSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEP--------------TLANGMILTDWV 665 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~--------------~~~~~~~~~~~~ 665 (725)
.... +-|.-|.|||.+.+. .|....|+||.||++.||+.|.+.+.....-++ ...+-..+.++.
T Consensus 158 ~~~~-V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~ 236 (318)
T KOG0659|consen 158 QTHQ-VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYV 236 (318)
T ss_pred cccc-eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHH
Confidence 3322 578899999988764 799999999999999999988877654332111 000011122222
Q ss_pred HHHHHc----CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCCCCCCccc
Q 039817 666 LYCVRT----GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVGVPPVVAD 721 (725)
Q Consensus 666 ~~~~~~----~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~~p~~~~~ 721 (725)
.-.... ..+-....+...+|+..|+..||.+|+|++|+++|= -+.+.+.|-.+..
T Consensus 237 ~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~-yf~~~P~pt~~~~ 295 (318)
T KOG0659|consen 237 KIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHP-YFKSLPLPTPPSK 295 (318)
T ss_pred HHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcch-hhhcCCCCCChhh
Confidence 211100 011123445679999999999999999999999873 2233444444443
No 80
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.6e-32 Score=291.61 Aligned_cols=237 Identities=22% Similarity=0.229 Sum_probs=189.0
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.+|++++.+.+.. .+..||||.+... .....+.+..|.+++..+ +||||+++++++..++..++||||+++++|
T Consensus 6 G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L 83 (321)
T cd05591 6 GSFGKVMLAELKG--TDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDL 83 (321)
T ss_pred CCCeEEEEEEECC--CCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcH
Confidence 3456666665543 3457888887643 233445678899999876 899999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
..++.+...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++....... .
T Consensus 84 ~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~-------~~~~kL~Dfg~~~~~~~~~~-~ 152 (321)
T cd05591 84 MFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDA-------EGHCKLADFGMCKEGILNGV-T 152 (321)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECC-------CCCEEEeecccceecccCCc-c
Confidence 99998888899999999999999999999999 9999999999999987 78999999999875432221 1
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCCCChhHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGNLGATKFE 680 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 680 (725)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.|+...... +....... ....+.....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~-----------~~~~~i~~~~~~~p~~~~~ 221 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED-----------DLFESILHDDVLYPVWLSK 221 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH-----------HHHHHHHcCCCCCCCCCCH
Confidence 22345899999999999999999999999999999999999999743211 11111111 1123334567
Q ss_pred HHHHHHHHccCCCCCCCC-------CHHHHHHH
Q 039817 681 RITMVGLWCICPQPTLRP-------SMKQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RP-------s~~evl~~ 706 (725)
.+.+++..||+.||++|| ++++++++
T Consensus 222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 889999999999999999 88888866
No 81
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.98 E-value=1.8e-32 Score=287.81 Aligned_cols=247 Identities=28% Similarity=0.349 Sum_probs=193.8
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccc-cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
...+|+.++++...-++....+++|.++.. .....+.|.+|++++.++ +||||+++++++...+..++|+||+++++|
T Consensus 11 g~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 90 (297)
T cd05089 11 GEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNL 90 (297)
T ss_pred cCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcH
Confidence 345667777776666666667888888642 233456799999999999 799999999999999999999999999999
Q ss_pred hhhhccC----------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEE
Q 039817 522 SAFLFRQ----------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKI 585 (725)
Q Consensus 522 ~~~l~~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl 585 (725)
.+++.+. ..+++..+..++.|++.||+|||+. +++||||||+||+++. ++.+||
T Consensus 91 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~-------~~~~kl 160 (297)
T cd05089 91 LDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGE-------NLASKI 160 (297)
T ss_pred HHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECC-------CCeEEE
Confidence 9999653 2478899999999999999999998 9999999999999987 788999
Q ss_pred eeccCccccCcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHH
Q 039817 586 ADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDW 664 (725)
Q Consensus 586 ~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 664 (725)
+|||++....... .......+..|+|||.+.+..++.++||||||+++|||++ |..|+..... .+.
T Consensus 161 ~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~-----------~~~ 227 (297)
T cd05089 161 ADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC-----------AEL 227 (297)
T ss_pred CCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----------HHH
Confidence 9999986432111 1111223557999999998889999999999999999997 8888754321 111
Q ss_pred HHHHHH--cCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 039817 665 VLYCVR--TGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEV 713 (725)
Q Consensus 665 ~~~~~~--~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 713 (725)
...... ....+...+..+.+++.+||+.+|.+||+++++++.|+.+.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 228 YEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111111 1123334567899999999999999999999999999887653
No 82
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.98 E-value=4.7e-32 Score=278.33 Aligned_cols=226 Identities=27% Similarity=0.398 Sum_probs=181.7
Q ss_pred eEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC-CCCCHHHHHHHHH
Q 039817 463 VEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIAL 541 (725)
Q Consensus 463 ~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~ 541 (725)
..+|+|.+... ....++|.+|+.++++++||||+++++++...+..++||||+++++|.+++... ..+++..++.++.
T Consensus 29 ~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~ 107 (256)
T cd05113 29 YDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCK 107 (256)
T ss_pred CcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHH
Confidence 45899988643 334578999999999999999999999999999999999999999999999764 4689999999999
Q ss_pred HHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCCC
Q 039817 542 GIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP 621 (725)
Q Consensus 542 qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 621 (725)
|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++..............++..|+|||.+.+..
T Consensus 108 ~i~~~l~~lH~~---~i~H~dl~p~nili~~-------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~ 177 (256)
T cd05113 108 DVCEGMAYLESK---QFIHRDLAARNCLVDD-------QGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSK 177 (256)
T ss_pred HHHHHHHHHHhC---CeeccccCcceEEEcC-------CCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCc
Confidence 999999999999 9999999999999987 788999999998865443322222233567899999999888
Q ss_pred CCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCH
Q 039817 622 VTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSM 700 (725)
Q Consensus 622 ~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~ 700 (725)
++.++||||||+++|||++ |..|+...... .....+.... ....+....+.+.+++.+||+.+|.+||++
T Consensus 178 ~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~ 248 (256)
T cd05113 178 FSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--------ETVEKVSQGL-RLYRPHLASEKVYAIMYSCWHEKAEERPTF 248 (256)
T ss_pred ccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence 9999999999999999998 88887533211 0111111100 111233456789999999999999999999
Q ss_pred HHHHHHhc
Q 039817 701 KQVLQMLE 708 (725)
Q Consensus 701 ~evl~~L~ 708 (725)
.++++.|+
T Consensus 249 ~~ll~~~~ 256 (256)
T cd05113 249 QQLLSSIE 256 (256)
T ss_pred HHHHHhhC
Confidence 99999875
No 83
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.98 E-value=6.2e-32 Score=287.88 Aligned_cols=244 Identities=22% Similarity=0.263 Sum_probs=191.0
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
+|+.++.+.+..+ +..||+|.++.. .....+.+..|..++.++ +||||+++++++...+..++||||+++|+|.
T Consensus 7 ~~g~V~~~~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~ 84 (329)
T cd05588 7 SYAKVLLVELKKT--RRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLM 84 (329)
T ss_pred CCeEEEEEEECCC--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHH
Confidence 3455555554433 457888888643 223345688999999998 7999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+++.+.+.+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||+++....... ..
T Consensus 85 ~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~-------~~~~kL~Dfg~~~~~~~~~~-~~ 153 (329)
T cd05588 85 FHMQRQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDA-------EGHIKLTDYGMCKEGIRPGD-TT 153 (329)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECC-------CCCEEECcCccccccccCCC-cc
Confidence 9998888899999999999999999999999 9999999999999987 78999999999875322211 12
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC--CCChhHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG--NLGATKFE 680 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 680 (725)
....||..|+|||++.+..++.++||||||+++|||++|+.||+........ .....++........ .++.....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~ 230 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNP---DQNTEDYLFQVILEKQIRIPRSLSV 230 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccc---cccchHHHHHHHHcCCCCCCCCCCH
Confidence 2356899999999999999999999999999999999999999643221100 111122232222222 34455677
Q ss_pred HHHHHHHHccCCCCCCCCC------HHHHHHH
Q 039817 681 RITMVGLWCICPQPTLRPS------MKQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs------~~evl~~ 706 (725)
.+.+++.+||+.||.+||+ +++++++
T Consensus 231 ~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 231 KASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 8999999999999999997 6788765
No 84
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.98 E-value=2.3e-32 Score=284.09 Aligned_cols=245 Identities=24% Similarity=0.357 Sum_probs=187.2
Q ss_pred ccHHHHHHHhcc---cCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNV---FDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~---~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.+++.++.|... .+.....||||.+.... .....+|.+|+.++++++|+||+++++++..+...++||||+++++|
T Consensus 17 G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L 96 (277)
T cd05062 17 GSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 96 (277)
T ss_pred ccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCH
Confidence 345555555432 12345679999885432 23455789999999999999999999999999999999999999999
Q ss_pred hhhhccC----------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCc
Q 039817 522 SAFLFRQ----------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLA 591 (725)
Q Consensus 522 ~~~l~~~----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla 591 (725)
.+++.+. ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~-------~~~~~l~dfg~~ 166 (277)
T cd05062 97 KSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE-------DFTVKIGDFGMT 166 (277)
T ss_pred HHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcC-------CCCEEECCCCCc
Confidence 9998643 2357889999999999999999998 9999999999999987 788999999998
Q ss_pred cccCcCCCcc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHH
Q 039817 592 KLLKKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCV 669 (725)
Q Consensus 592 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (725)
+......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|+..... ....+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--------~~~~~~~~~~- 237 (277)
T cd05062 167 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--------EQVLRFVMEG- 237 (277)
T ss_pred cccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHcC-
Confidence 7654322211 112235678999999998899999999999999999999 5666643211 0111111100
Q ss_pred HcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 670 RTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 670 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
.....+...+..+.+++.+|++.+|++|||+.|++++|+.
T Consensus 238 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 238 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 0112334556789999999999999999999999999863
No 85
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-32 Score=265.36 Aligned_cols=212 Identities=25% Similarity=0.238 Sum_probs=182.9
Q ss_pred ceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHH
Q 039817 462 EVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVE 538 (725)
Q Consensus 462 ~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~ 538 (725)
+...|+|.|++.. ....+...+|..+|+.+.||.++++++.+.+.+..+|||||.++|-|..+|.+.+++++....-
T Consensus 69 g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arF 148 (355)
T KOG0616|consen 69 GNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARF 148 (355)
T ss_pred CceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHH
Confidence 4578888886532 2334567899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhccc
Q 039817 539 IALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR 618 (725)
Q Consensus 539 i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 618 (725)
++.||+.||+|||+. .|++|||||+|||||. +|.+||.|||.|+..... ....+||+.|+|||.++
T Consensus 149 YAAeivlAleylH~~---~iiYRDLKPENiLlD~-------~G~iKitDFGFAK~v~~r----T~TlCGTPeYLAPEii~ 214 (355)
T KOG0616|consen 149 YAAEIVLALEYLHSL---DIIYRDLKPENLLLDQ-------NGHIKITDFGFAKRVSGR----TWTLCGTPEYLAPEIIQ 214 (355)
T ss_pred HHHHHHHHHHHHHhc---CeeeccCChHHeeecc-------CCcEEEEeccceEEecCc----EEEecCCccccChHHhh
Confidence 999999999999999 9999999999999988 999999999999976543 34578999999999999
Q ss_pred CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCC
Q 039817 619 NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLR 697 (725)
Q Consensus 619 ~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~R 697 (725)
.+.+..++|.|+|||++|||+.|.+||..... +.-+-.-+..+-.+|......+++|+...++.|-.+|
T Consensus 215 sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~----------~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 215 SKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP----------IQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh----------HHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 99999999999999999999999999986532 1111111222335677778889999999999999999
No 86
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.98 E-value=1.7e-32 Score=290.69 Aligned_cols=248 Identities=22% Similarity=0.327 Sum_probs=192.3
Q ss_pred ccccHHHHHHHhcccCCc--ceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 444 KVFSYQELREATNVFDGQ--EVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~--~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
...+|+.++++...-++. ...||+|.++... ....++|.+|+.+++.++|+||++++|+|... ..++|+||+++|+
T Consensus 16 g~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~ 94 (316)
T cd05108 16 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGC 94 (316)
T ss_pred ecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCC
Confidence 445677777776544433 3468999986432 34457899999999999999999999999865 5679999999999
Q ss_pred hhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 521 LSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 521 L~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
|.+++... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 95 l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~-------~~~~kl~DfG~a~~~~~~~~ 164 (316)
T cd05108 95 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKT-------PQHVKITDFGLAKLLGADEK 164 (316)
T ss_pred HHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecC-------CCcEEEccccccccccCCCc
Confidence 99999765 4688999999999999999999999 9999999999999987 77899999999987654332
Q ss_pred ccc-cccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChh
Q 039817 600 RTS-TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGAT 677 (725)
Q Consensus 600 ~~~-~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (725)
... ....++..|+|||.+.+..++.++||||||+++|||++ |+.|+...... ........ ......+..
T Consensus 165 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--------~~~~~~~~-~~~~~~~~~ 235 (316)
T cd05108 165 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--------EISSILEK-GERLPQPPI 235 (316)
T ss_pred ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHhC-CCCCCCCCC
Confidence 211 11224668999999999999999999999999999998 88887532110 01111110 001122234
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 678 KFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
....+.+++.+||+.+|.+||++.+++..|..+.
T Consensus 236 ~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 236 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 4567899999999999999999999999987654
No 87
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.98 E-value=2.3e-32 Score=279.77 Aligned_cols=242 Identities=23% Similarity=0.315 Sum_probs=187.9
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
..|+.++++++.-+ +..+++|..... .......|.+|++++++++|+||+++++++...+..++||||+++++|.++
T Consensus 6 g~~g~vy~~~~~~~--~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 83 (252)
T cd05084 6 GNFGEVFSGRLRAD--NTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTF 83 (252)
T ss_pred ccCccEEEEEEecC--CceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHH
Confidence 34566666666443 457888877543 233456799999999999999999999999999999999999999999999
Q ss_pred hccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc-
Q 039817 525 LFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS- 602 (725)
Q Consensus 525 l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~- 602 (725)
+.+. ..+++..+..++.|+++||.|||+. +++|+||||+||+++. ++.+||+|||++...........
T Consensus 84 ~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~-------~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 84 LRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTE-------KNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred HHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcC-------CCcEEECccccCcccccccccccC
Confidence 9764 4689999999999999999999999 9999999999999987 77899999999876443211111
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
.....+..|+|||.+.+..++.++||||||+++|||++ |..|+...... .....+.. ......+...+..
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~ 224 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------QTREAIEQ-GVRLPCPELCPDA 224 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------HHHHHHHc-CCCCCCcccCCHH
Confidence 11123457999999998899999999999999999998 77776432110 01111111 0112233445678
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
+.+++.+|++.+|++|||+.+|+++|+
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 999999999999999999999999986
No 88
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.98 E-value=6.2e-32 Score=287.77 Aligned_cols=245 Identities=22% Similarity=0.248 Sum_probs=190.8
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.+|+.++.+.+..+ +..+|+|.++.. .....+.+.+|+.++.++ +||||+++++++..++..++||||+++|+|
T Consensus 6 G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L 83 (329)
T cd05618 6 GSYAKVLLVRLKKT--ERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 83 (329)
T ss_pred CCCeEEEEEEECCC--CCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCH
Confidence 34555555554433 457888887643 223345678899988876 899999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
..++.+...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++....... .
T Consensus 84 ~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~-------~~~~kL~DfG~~~~~~~~~~-~ 152 (329)
T cd05618 84 MFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDS-------EGHIKLTDYGMCKEGLRPGD-T 152 (329)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECC-------CCCEEEeeCCccccccCCCC-c
Confidence 99998888899999999999999999999999 9999999999999987 78999999999875322211 1
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCChhHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGATKF 679 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 679 (725)
.....||..|+|||.+.+..++.++||||||+++|||++|+.||........ ......+++...... ..++....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~---~~~~~~~~~~~~i~~~~~~~p~~~~ 229 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN---PDQNTEDYLFQVILEKQIRIPRSLS 229 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCC---cccccHHHHHHHHhcCCCCCCCCCC
Confidence 2234689999999999999999999999999999999999999864322110 011112223222222 23555667
Q ss_pred HHHHHHHHHccCCCCCCCCC------HHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRPS------MKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs------~~evl~~ 706 (725)
..+.+++.+||+.||++||+ +.+++++
T Consensus 230 ~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 230 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 88999999999999999998 5677655
No 89
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.98 E-value=3.4e-32 Score=279.50 Aligned_cols=245 Identities=27% Similarity=0.378 Sum_probs=191.3
Q ss_pred cHHHHHHHhcccC-CcceEEEEEEcccccC-ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFD-GQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~-~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.|+.|++|...-. +....+++|.+..... ...+++.+|++++++++|+||+++++++. .+..++||||+++++|.++
T Consensus 7 ~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~ 85 (257)
T cd05060 7 NFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKY 85 (257)
T ss_pred CceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHH
Confidence 3455555543222 2457899999875433 34568999999999999999999999876 4568999999999999999
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc--
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS-- 602 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~-- 602 (725)
+.+...+++..+..++.|++.||.|||.. +++|+||||+||+++. ++.+||+|||+++..........
T Consensus 86 l~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~-------~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 86 LKKRREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVN-------RHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred HHhCCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcC-------CCcEEeccccccceeecCCcccccc
Confidence 98878899999999999999999999998 9999999999999987 78899999999986643322211
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
....++..|+|||.+.+..++.++||||||+++|||++ |..|+..... ......+... .....+...+..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~ 226 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--------AEVIAMLESG-ERLPRPEECPQE 226 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHcC-CcCCCCCCCCHH
Confidence 11224567999999998899999999999999999998 8888754321 1111111111 111233445678
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
+.+++.+|++.+|++||++.+|++.|+++.
T Consensus 227 l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 227 IYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 999999999999999999999999998764
No 90
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.98 E-value=3.3e-32 Score=283.18 Aligned_cols=249 Identities=22% Similarity=0.330 Sum_probs=191.1
Q ss_pred ccccHHHHHHHhcccCCcc--eEEEEEEcccccC-ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 444 KVFSYQELREATNVFDGQE--VEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~--~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
...++++++++...-+++. ..+++|.+..... ....++..|+..+++++|+||+++++++. +...++++||+++|+
T Consensus 16 g~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~gs 94 (279)
T cd05111 16 GSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSPLGS 94 (279)
T ss_pred CccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCCCCc
Confidence 3456677777766555543 3578888754322 23457888888999999999999999875 455789999999999
Q ss_pred hhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 521 LSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 521 L~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
|.+++... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++.......
T Consensus 95 L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~-------~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T cd05111 95 LLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKS-------DSIVQIADFGVADLLYPDDK 164 (279)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcC-------CCcEEEcCCccceeccCCCc
Confidence 99999764 5789999999999999999999998 9999999999999987 78999999999986543322
Q ss_pred c-cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChh
Q 039817 600 R-TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGAT 677 (725)
Q Consensus 600 ~-~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (725)
. ......++..|+|||.+.+..++.++||||||+++||+++ |+.|+...... ...+.+.. ......+..
T Consensus 165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~~-~~~~~~~~~ 235 (279)
T cd05111 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--------EVPDLLEK-GERLAQPQI 235 (279)
T ss_pred ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHC-CCcCCCCCC
Confidence 1 1223446778999999998899999999999999999998 88887543211 11111110 001111223
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 678 KFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
....+.+++.+|+..+|.+|||+.|+++.|+.+..
T Consensus 236 ~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 236 CTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 45677889999999999999999999999988653
No 91
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.98 E-value=2.4e-32 Score=260.03 Aligned_cols=204 Identities=25% Similarity=0.387 Sum_probs=174.1
Q ss_pred HHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCc
Q 039817 479 KSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQ 557 (725)
Q Consensus 479 ~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ 557 (725)
++-++|+.+|+++ .||+|+++.++++.+...++|+|.|+.|-|.|+|...-.++++...+|+.|+.+|+.|||.. +
T Consensus 67 EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~---~ 143 (411)
T KOG0599|consen 67 EATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR---N 143 (411)
T ss_pred HHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh---h
Confidence 3457899999998 69999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred eeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccC------CCCCCccceehh
Q 039817 558 IIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRN------APVTAKVDVYSF 631 (725)
Q Consensus 558 ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~ksDv~S~ 631 (725)
||||||||+|||+|+ +.++||+|||.++.+..... ....+||++|+|||.+.. ..|+...|+|+.
T Consensus 144 IVHRDLKpENILldd-------n~~i~isDFGFa~~l~~Gek--LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~ 214 (411)
T KOG0599|consen 144 IVHRDLKPENILLDD-------NMNIKISDFGFACQLEPGEK--LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWAC 214 (411)
T ss_pred hhhcccChhheeecc-------ccceEEeccceeeccCCchh--HHHhcCCCcccChhheeeecccCCCCccchhhHHHH
Confidence 999999999999988 88999999999998765433 345779999999998853 357889999999
Q ss_pred HHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCCh------hHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 039817 632 GVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA------TKFERITMVGLWCICPQPTLRPSMKQVLQ 705 (725)
Q Consensus 632 G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 705 (725)
|++||-|+.|.+||--.. ++. +...+.++.+.- +..+...+|+.+||+.||.+|.|++|+++
T Consensus 215 GVImyTLLaGcpPFwHRk--------Qml----MLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 215 GVIMYTLLAGCPPFWHRK--------QML----MLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHHHHcCCCchhHHH--------HHH----HHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 999999999999884211 111 233333444321 55678899999999999999999999986
Q ss_pred H
Q 039817 706 M 706 (725)
Q Consensus 706 ~ 706 (725)
|
T Consensus 283 H 283 (411)
T KOG0599|consen 283 H 283 (411)
T ss_pred C
Confidence 5
No 92
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.98 E-value=2.2e-32 Score=289.65 Aligned_cols=236 Identities=25% Similarity=0.252 Sum_probs=186.2
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhc-cCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGR-THHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.+|++|++|.+.- .+..||+|.+... .....+.+..|.+++.. .+||||+++++++..++..++||||+++|+|
T Consensus 6 G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L 83 (316)
T cd05592 6 GSFGKVMLAELKG--TNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDL 83 (316)
T ss_pred CCCeEEEEEEECC--CCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcH
Confidence 4566666666543 3457889988642 22334556777777765 4899999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++...... ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~-------~~~~kL~Dfg~a~~~~~~~-~~ 152 (316)
T cd05592 84 MFHIQSSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDK-------DGHIKIADFGMCKENMNGE-GK 152 (316)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECC-------CCCEEEccCcCCeECCCCC-Cc
Confidence 99998888899999999999999999999998 9999999999999987 7899999999998543322 12
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH-HcCCCChhHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV-RTGNLGATKFE 680 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 680 (725)
.....||..|+|||.+.+..++.++||||||+++|||++|+.|+...... +...... ....++.....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-----------~~~~~i~~~~~~~~~~~~~ 221 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-----------ELFDSILNDRPHFPRWISK 221 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHHcCCCCCCCCCCH
Confidence 22345899999999999989999999999999999999999998643211 1111111 12234445667
Q ss_pred HHHHHHHHccCCCCCCCCCHH-HHHH
Q 039817 681 RITMVGLWCICPQPTLRPSMK-QVLQ 705 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~-evl~ 705 (725)
.+.+++.+||+.+|++||++. ++++
T Consensus 222 ~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHHc
Confidence 889999999999999999875 5544
No 93
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.98 E-value=2.3e-32 Score=284.46 Aligned_cols=240 Identities=24% Similarity=0.279 Sum_probs=187.9
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
+|++++.+.+..++ ..+|+|.+.... ....+.+..|++++++++|+||+++.+++..+...++||||+++|+|.+
T Consensus 5 ~~g~Vy~~~~~~~~--~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~ 82 (280)
T cd05608 5 GFGEVSACQMRATG--KLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRY 82 (280)
T ss_pred CceeEEEEEEccCC--cEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHH
Confidence 45566666555443 578888875422 2233567899999999999999999999999999999999999999998
Q ss_pred hhcc----CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 524 FLFR----QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 524 ~l~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++........
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~-------~~~~~l~dfg~~~~~~~~~~ 152 (280)
T cd05608 83 HIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDN-------DGNVRISDLGLAVELKDGQS 152 (280)
T ss_pred HHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC-------CCCEEEeeCccceecCCCCc
Confidence 8743 35689999999999999999999999 9999999999999987 78899999999976543322
Q ss_pred ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCCCChhH
Q 039817 600 RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGNLGATK 678 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 678 (725)
. .....|++.|+|||.+.+..++.++||||||+++|||++|+.|+....... ........... ....+...
T Consensus 153 ~-~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 224 (280)
T cd05608 153 K-TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-------ENKELKQRILNDSVTYPDKF 224 (280)
T ss_pred c-ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-------hHHHHHHhhcccCCCCcccC
Confidence 1 223458999999999999999999999999999999999999986532211 00111111111 11233456
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 679 FERITMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
++.+.+++.+||+.||++|| ++++++++
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 225 SPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 77899999999999999999 78888876
No 94
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.98 E-value=4.4e-32 Score=281.02 Aligned_cols=247 Identities=23% Similarity=0.353 Sum_probs=191.1
Q ss_pred cccHHHHHHHhcccCC-cceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCCc------eeeeeec
Q 039817 445 VFSYQELREATNVFDG-QEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNH------QLLVYEL 515 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~-~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------~~lV~e~ 515 (725)
..+|+.++.|+...++ ....||+|.++... ....+.+.+|++.+++++|+||+++++++..... .++|+||
T Consensus 9 ~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~ 88 (273)
T cd05035 9 EGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPF 88 (273)
T ss_pred cCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEec
Confidence 4556677777654433 45679999886432 2335679999999999999999999999876554 7999999
Q ss_pred ccCCChhhhhccC------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeecc
Q 039817 516 MKNGTLSAFLFRQ------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFG 589 (725)
Q Consensus 516 ~~~gsL~~~l~~~------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfg 589 (725)
+++++|..++... ..+++.....++.|++.||.|||+. +++||||||+||++++ ++.+||+|||
T Consensus 89 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~-------~~~~kl~dfg 158 (273)
T cd05035 89 MKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLRE-------DMTVCVADFG 158 (273)
T ss_pred cCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECC-------CCeEEECCcc
Confidence 9999999998543 3578999999999999999999998 9999999999999987 7889999999
Q ss_pred CccccCcCCCcc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHH
Q 039817 590 LAKLLKKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLY 667 (725)
Q Consensus 590 la~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (725)
+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|+..... ....+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--------~~~~~~~~~ 230 (273)
T cd05035 159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--------HEIYDYLRH 230 (273)
T ss_pred ceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHc
Confidence 998654332211 112235678999999988899999999999999999999 7777643211 111111111
Q ss_pred HHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 668 CVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 668 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
. .....+......+.+++.+|++.||++|||+.||++.|+++
T Consensus 231 ~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 G-NRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred C-CCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 01123445677899999999999999999999999999875
No 95
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.98 E-value=5.6e-32 Score=280.23 Aligned_cols=244 Identities=25% Similarity=0.368 Sum_probs=190.1
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcC------Cceeeeeecc
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ------NHQLLVYELM 516 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~lV~e~~ 516 (725)
..+|+.++++.....+....+|+|.++.. .....+.|.+|++++++++|+||+++++++... ...++++||+
T Consensus 9 ~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~ 88 (272)
T cd05075 9 EGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFM 88 (272)
T ss_pred cccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeC
Confidence 45567777777666666567899987643 233456789999999999999999999988532 2468999999
Q ss_pred cCCChhhhhcc------CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccC
Q 039817 517 KNGTLSAFLFR------QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGL 590 (725)
Q Consensus 517 ~~gsL~~~l~~------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgl 590 (725)
++|+|.+++.. ...+++.....++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 89 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~-------~~~~kl~Dfg~ 158 (272)
T cd05075 89 KHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNE-------NMNVCVADFGL 158 (272)
T ss_pred CCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcC-------CCCEEECCCCc
Confidence 99999998742 23478999999999999999999998 9999999999999987 78899999999
Q ss_pred ccccCcCCCc-cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHH
Q 039817 591 AKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYC 668 (725)
Q Consensus 591 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (725)
++........ ......++..|+|||...+..++.++||||||+++|||++ |+.|+..... .+ ....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----------~~-~~~~ 226 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-----------SE-IYDY 226 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-----------HH-HHHH
Confidence 9876433221 1122335678999999999999999999999999999999 6777653211 11 1111
Q ss_pred HHcC---CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 669 VRTG---NLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 669 ~~~~---~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
...+ ..+...++.+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 227 LRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1222 22334567799999999999999999999999999874
No 96
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.98 E-value=3.7e-32 Score=282.53 Aligned_cols=247 Identities=27% Similarity=0.344 Sum_probs=189.9
Q ss_pred ccHHHHHHHhcccC---CcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFD---GQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~---~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..++.++.|..... .....|++|.+.... ......|.+|+.++++++|+||+++++++.+.+..++||||+++++|
T Consensus 17 g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L 96 (277)
T cd05036 17 GAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDL 96 (277)
T ss_pred CCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCH
Confidence 44566666655431 256789999886433 33456799999999999999999999999999999999999999999
Q ss_pred hhhhccCC-------CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcccc
Q 039817 522 SAFLFRQE-------IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL 594 (725)
Q Consensus 522 ~~~l~~~~-------~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~ 594 (725)
.+++.+.+ .+++..+..++.|++.||+|||+. +++|+||||+||+++.+. ....+||+|||+++..
T Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~----~~~~~kl~dfg~~~~~ 169 (277)
T cd05036 97 KSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKG----PGRVAKIADFGMARDI 169 (277)
T ss_pred HHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccC----CCcceEeccCcccccc
Confidence 99986543 478999999999999999999999 999999999999998631 1346999999999866
Q ss_pred CcCCCcc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcC
Q 039817 595 KKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTG 672 (725)
Q Consensus 595 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (725)
....... ......+..|+|||++.+..++.++||||||+++|||++ |..|+...... ...+.+.. ....
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--------~~~~~~~~-~~~~ 240 (277)
T cd05036 170 YRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--------EVMEFVTG-GGRL 240 (277)
T ss_pred CCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHHc-CCcC
Confidence 3322111 111223567999999998999999999999999999997 88877643211 11111110 0112
Q ss_pred CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 673 NLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 673 ~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
..+...+..+.+++.+|++.+|++||++.+|+++|+
T Consensus 241 ~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 241 DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 334455678999999999999999999999999986
No 97
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.98 E-value=1e-31 Score=280.16 Aligned_cols=240 Identities=24% Similarity=0.351 Sum_probs=184.2
Q ss_pred cceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcC--CceeeeeecccCCChhhhhccCCCCCHHHHH
Q 039817 461 QEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKNGTLSAFLFRQEIPTWDKRV 537 (725)
Q Consensus 461 ~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~ 537 (725)
.+..||+|.+.... ....+.|.+|++++++++||||+++++++... ...++||||+++++|.+++... .+++..+.
T Consensus 32 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~ 110 (283)
T cd05080 32 TGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLL 110 (283)
T ss_pred CCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc-CCCHHHHH
Confidence 45578999886533 23467889999999999999999999998754 3578999999999999999654 58999999
Q ss_pred HHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc--ccccccCccccchh
Q 039817 538 EIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT--STMIRGTMGYMAPE 615 (725)
Q Consensus 538 ~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~--~~~~~gt~~y~aPE 615 (725)
.++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++......... .....++..|+|||
T Consensus 111 ~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~-------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE 180 (283)
T cd05080 111 LFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDN-------DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVE 180 (283)
T ss_pred HHHHHHHHHHHHHHHC---CeeccccChheEEEcC-------CCcEEEeecccccccCCcchhhccCCCCCCCceeeCHh
Confidence 9999999999999999 9999999999999987 7889999999998664332211 11223566799999
Q ss_pred cccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc---cccCcchHHHHHHHHHc---CCCChhHHHHHHHHHHHc
Q 039817 616 WLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT---LANGMILTDWVLYCVRT---GNLGATKFERITMVGLWC 689 (725)
Q Consensus 616 ~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~l~~~c 689 (725)
.+.+..++.++||||||++++||++|..|+......... ................. ...+...+..+.+++..|
T Consensus 181 ~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 260 (283)
T cd05080 181 CLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNC 260 (283)
T ss_pred HhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 998888999999999999999999999887543211100 00000001111111111 122344567899999999
Q ss_pred cCCCCCCCCCHHHHHHHhcCCC
Q 039817 690 ICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 690 l~~dp~~RPs~~evl~~L~~~~ 711 (725)
|+.+|++|||+++|+++|+.+.
T Consensus 261 l~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 261 WETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hccChhhCCCHHHHHHHHHHhh
Confidence 9999999999999999998753
No 98
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.98 E-value=6.6e-32 Score=288.29 Aligned_cols=242 Identities=20% Similarity=0.207 Sum_probs=189.8
Q ss_pred cHHHHHHHhcccC-CcceEEEEEEcccc----cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 447 SYQELREATNVFD-GQEVEVAVKQLEKV----TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 447 ~~~~l~~a~~~~~-~~~~~vavk~l~~~----~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
+|+.++.+.+... ..+..||+|.+... .....+.+..|++++.++ +|+||+++++++..++..++||||+++|+
T Consensus 12 ~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 91 (332)
T cd05614 12 AYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGE 91 (332)
T ss_pred CCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCc
Confidence 4444454443322 24567899988542 122345688999999999 59999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|.+++.+...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++........
T Consensus 92 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~-------~~~~kl~DfG~~~~~~~~~~~ 161 (332)
T cd05614 92 MFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDS-------EGHVVLTDFGLSKEFLSEEKE 161 (332)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECC-------CCCEEEeeCcCCccccccCCC
Confidence 999998888899999999999999999999999 9999999999999987 789999999999865443333
Q ss_pred cccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChh
Q 039817 601 TSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGAT 677 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 677 (725)
......||..|+|||.+.+. .++.++||||||+++|||++|+.|+....... . ...+..... ...++..
T Consensus 162 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------~-~~~~~~~~~~~~~~~~~~ 233 (332)
T cd05614 162 RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN-------T-QSEVSRRILKCDPPFPSF 233 (332)
T ss_pred ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC-------C-HHHHHHHHhcCCCCCCCC
Confidence 33345689999999999865 47889999999999999999999986432211 1 111111111 2234445
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 678 KFERITMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
....+.+++.+||+.||++|| ++++++++
T Consensus 234 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 234 IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 677899999999999999999 78888865
No 99
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=2.4e-32 Score=296.88 Aligned_cols=243 Identities=19% Similarity=0.202 Sum_probs=184.3
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
..+++.++.+.+...+ ..||+|... ...+.+|++++++++|||||++++++..+...++|+|++. ++|.++
T Consensus 102 ~G~~g~V~~~~d~~~~--~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~ 172 (391)
T PHA03212 102 PGAEGFAFACIDNKTC--EHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCY 172 (391)
T ss_pred CCCCeEEEEEEECCCC--CEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHH
Confidence 3456667767665544 467888643 2457899999999999999999999999999999999996 689999
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
+.....+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++............
T Consensus 173 l~~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~-------~~~vkL~DFG~a~~~~~~~~~~~~~ 242 (391)
T PHA03212 173 LAAKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINH-------PGDVCLGDFGAACFPVDINANKYYG 242 (391)
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcC-------CCCEEEEeCCccccccccccccccc
Confidence 88778899999999999999999999999 9999999999999987 7889999999997543322222233
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCc----------------------chH
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGM----------------------ILT 662 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~----------------------~~~ 662 (725)
..||+.|+|||++.+..++.++||||||+++|||++|+.|+.............. .+.
T Consensus 243 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~ 322 (391)
T PHA03212 243 WAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLD 322 (391)
T ss_pred ccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHH
Confidence 5699999999999999999999999999999999999987653321110000000 000
Q ss_pred HHHHHHHHcCC-----CC-----hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 663 DWVLYCVRTGN-----LG-----ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 663 ~~~~~~~~~~~-----~~-----~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
........... .+ ...+..+.+|+.+||+.||++|||++|++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 323 EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000000000 00 0235578899999999999999999999964
No 100
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.98 E-value=3.8e-32 Score=290.22 Aligned_cols=251 Identities=27% Similarity=0.369 Sum_probs=191.4
Q ss_pred ccccHHHHHHHhcccC---CcceEEEEEEcccccC-ccHHHHHHHHHHHhcc-CcCCccceeeEEEcC-Cceeeeeeccc
Q 039817 444 KVFSYQELREATNVFD---GQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQ-NHQLLVYELMK 517 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~---~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~-~~~~lV~e~~~ 517 (725)
...+|+.++.|...-. .....||+|.+..... ...+.+.+|++++.++ +|+||++++++|... ...+++|||++
T Consensus 16 G~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~ 95 (337)
T cd05054 16 GRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCK 95 (337)
T ss_pred ccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCC
Confidence 3456677777654222 2346899999864332 2345688999999999 899999999988754 56889999999
Q ss_pred CCChhhhhccC-------------------------------------------------------------CCCCHHHH
Q 039817 518 NGTLSAFLFRQ-------------------------------------------------------------EIPTWDKR 536 (725)
Q Consensus 518 ~gsL~~~l~~~-------------------------------------------------------------~~l~~~~~ 536 (725)
+++|.+++... ..+++..+
T Consensus 96 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 175 (337)
T cd05054 96 FGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDL 175 (337)
T ss_pred CCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHH
Confidence 99999988532 25789999
Q ss_pred HHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-cccccccCccccchh
Q 039817 537 VEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPE 615 (725)
Q Consensus 537 ~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE 615 (725)
..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++.+...... ......++..|+|||
T Consensus 176 ~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~-------~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 245 (337)
T cd05054 176 ISYSFQVARGMEFLASR---KCIHRDLAARNILLSE-------NNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 245 (337)
T ss_pred HHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeC-------CCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence 99999999999999999 9999999999999987 778999999999875433221 122234667899999
Q ss_pred cccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCC
Q 039817 616 WLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQP 694 (725)
Q Consensus 616 ~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp 694 (725)
++.+..++.++||||||++++||++ |..|+......+ .+...+... .....+....+.+.+++.+||+.+|
T Consensus 246 ~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p 317 (337)
T cd05054 246 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-------EFCRRLKEG-TRMRAPEYATPEIYSIMLDCWHNNP 317 (337)
T ss_pred HhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-------HHHHHHhcc-CCCCCCccCCHHHHHHHHHHccCCh
Confidence 9999999999999999999999998 888876432111 011111110 0112233456789999999999999
Q ss_pred CCCCCHHHHHHHhcCCCC
Q 039817 695 TLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 695 ~~RPs~~evl~~L~~~~~ 712 (725)
++||++.||+++|+.+.+
T Consensus 318 ~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 318 EDRPTFSELVEILGDLLQ 335 (337)
T ss_pred hhCcCHHHHHHHHHHHHh
Confidence 999999999999987643
No 101
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.98 E-value=8.1e-32 Score=280.42 Aligned_cols=242 Identities=24% Similarity=0.359 Sum_probs=190.5
Q ss_pred cHHHHHHHhcc---cCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNV---FDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~---~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
+|+.++.+... -.+++..+++|.+........+.|.+|++++++++|+||+++++++..++..++||||+++++|.+
T Consensus 17 ~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 96 (280)
T cd05092 17 AFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNR 96 (280)
T ss_pred cCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHH
Confidence 44555544321 124456889999877666667789999999999999999999999999999999999999999999
Q ss_pred hhccCC---------------CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeec
Q 039817 524 FLFRQE---------------IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADF 588 (725)
Q Consensus 524 ~l~~~~---------------~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Df 588 (725)
++.... .+++..+..++.|++.||+|||+. +++|+||||+||++++ ++.+||+||
T Consensus 97 ~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~-------~~~~kL~df 166 (280)
T cd05092 97 FLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQ-------GLVVKIGDF 166 (280)
T ss_pred HHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcC-------CCCEEECCC
Confidence 986542 478999999999999999999998 9999999999999987 788999999
Q ss_pred cCccccCcCCCc-cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHH
Q 039817 589 GLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVL 666 (725)
Q Consensus 589 gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (725)
|+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |+.|+...... +...
T Consensus 167 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----------~~~~ 235 (280)
T cd05092 167 GMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT-----------EAIE 235 (280)
T ss_pred CceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH-----------HHHH
Confidence 999755432211 1112235678999999999999999999999999999998 77776432111 1111
Q ss_pred HHHH--cCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 667 YCVR--TGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 667 ~~~~--~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
.... ....+...+..+.+++.+||+.||.+||++.+|++.|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 236 CITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1111 112233456789999999999999999999999999874
No 102
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=2.8e-33 Score=296.11 Aligned_cols=240 Identities=25% Similarity=0.354 Sum_probs=190.9
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCC--ceeeeeecccCC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN--HQLLVYELMKNG 519 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~e~~~~g 519 (725)
.+..+..+++|.+..+|-.++---+++... +....+.|..|+++|+.|+|+|||+++.++.+.. ..-+|+|.|..|
T Consensus 49 GrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSG 128 (632)
T KOG0584|consen 49 GRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSG 128 (632)
T ss_pred ccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCC
Confidence 445566677777644443222111222222 2334578999999999999999999999998654 478999999999
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 520 sL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
+|..|+.+.+..+.+.+.+|++||++||.|||.+ .|+|||||||.+||||+.+ .|.|||+|+|||.+......
T Consensus 129 tLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~------~G~VKIGDLGLAtl~r~s~a 201 (632)
T KOG0584|consen 129 TLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGN------LGEVKIGDLGLATLLRKSHA 201 (632)
T ss_pred cHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCC------cCceeecchhHHHHhhcccc
Confidence 9999999999999999999999999999999997 6799999999999999875 78999999999998765433
Q ss_pred ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCCh---
Q 039817 600 RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA--- 676 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 676 (725)
. ...||+.|||||... ..|++..|||||||+|+||+|+..|+...... ..+......|.-|.
T Consensus 202 k---svIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~-----------AQIYKKV~SGiKP~sl~ 266 (632)
T KOG0584|consen 202 K---SVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP-----------AQIYKKVTSGIKPAALS 266 (632)
T ss_pred c---eeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH-----------HHHHHHHHcCCCHHHhh
Confidence 2 367999999999988 67999999999999999999999999755432 22223233333322
Q ss_pred -hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 677 -TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 677 -~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...++++++|.+|+.. ..+|||+.|++++
T Consensus 267 kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 267 KVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 3357899999999999 9999999999964
No 103
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.98 E-value=5.8e-32 Score=284.64 Aligned_cols=247 Identities=27% Similarity=0.383 Sum_probs=191.0
Q ss_pred ccHHHHHHHhcc---cCCcceEEEEEEccccc-CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 446 FSYQELREATNV---FDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 446 ~~~~~l~~a~~~---~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
..++.++.++.. -......||||.++... ....+.+.+|+++++++ +|+||+++++++...+..++||||+++++
T Consensus 46 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 125 (302)
T cd05055 46 GAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGD 125 (302)
T ss_pred cCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCc
Confidence 445556555532 12345679999886543 23345789999999999 79999999999999999999999999999
Q ss_pred hhhhhccCC--CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 521 LSAFLFRQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 521 L~~~l~~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
|.+++.+.. .+++.++..++.|++.||.|||+. +++|+||||+||+++. +..+|++|||+++......
T Consensus 126 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~-------~~~~~l~dfg~~~~~~~~~ 195 (302)
T cd05055 126 LLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTH-------GKIVKICDFGLARDIMNDS 195 (302)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcC-------CCeEEECCCcccccccCCC
Confidence 999997543 389999999999999999999998 9999999999999987 7789999999998654332
Q ss_pred Cc-cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCCh
Q 039817 599 TR-TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676 (725)
Q Consensus 599 ~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (725)
.. ......++..|+|||.+.+..++.++||||||+++|||++ |..|+....... .......... ....+.
T Consensus 196 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-------~~~~~~~~~~-~~~~~~ 267 (302)
T cd05055 196 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-------KFYKLIKEGY-RMAQPE 267 (302)
T ss_pred ceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-------HHHHHHHcCC-cCCCCC
Confidence 21 1112335678999999998899999999999999999998 888875432111 0111111100 111223
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
..++.+.+++.+|++.+|++|||+.|+++.|++.
T Consensus 268 ~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 268 HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 4467899999999999999999999999999864
No 104
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.98 E-value=8.3e-32 Score=287.33 Aligned_cols=246 Identities=21% Similarity=0.294 Sum_probs=187.0
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.+|+.|+.+.+..++ ..+++|.+... .....+.+.+|++++++++|+||+++++++..++..++||||+++++|.++
T Consensus 16 g~~g~V~~~~~~~~~--~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 93 (333)
T cd06650 16 GNGGVVFKVSHKPSG--LIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 93 (333)
T ss_pred CCCEEEEEEEECCCC--cEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHH
Confidence 345566666654443 46778876543 223446799999999999999999999999999999999999999999999
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
+.+.+.+++.....++.|++.||.|||+. .+++|+||||+|||++. ++.+||+|||++....... ...
T Consensus 94 l~~~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~-------~~~~kL~Dfg~~~~~~~~~---~~~ 161 (333)
T cd06650 94 LKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNS-------RGEIKLCDFGVSGQLIDSM---ANS 161 (333)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcC-------CCCEEEeeCCcchhhhhhc---ccc
Confidence 98888899999999999999999999974 16999999999999987 7789999999987553321 122
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc----------cc------------------
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT----------LA------------------ 656 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~----------~~------------------ 656 (725)
..|+..|+|||.+.+..++.++||||||+++|||++|+.|+......... ..
T Consensus 162 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (333)
T cd06650 162 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSY 241 (333)
T ss_pred CCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhh
Confidence 45889999999999888999999999999999999999998643211000 00
Q ss_pred -----cCcchHHHHHHHHHcCCCCh----hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 657 -----NGMILTDWVLYCVRTGNLGA----TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 657 -----~~~~~~~~~~~~~~~~~~~~----~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
....... ..........+. ....++.+|+.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 242 GPDSRPPMAIFE-LLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred cccccccccHHH-HHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 0000000 111111111111 234678999999999999999999999765
No 105
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=5.7e-32 Score=277.25 Aligned_cols=244 Identities=23% Similarity=0.352 Sum_probs=204.7
Q ss_pred CCCcccccHHHHHHHhcccCCcceEEEEEEccc--ccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeeccc
Q 039817 440 EINMKVFSYQELREATNVFDGQEVEVAVKQLEK--VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517 (725)
Q Consensus 440 ~~~~~~~~~~~l~~a~~~~~~~~~~vavk~l~~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~ 517 (725)
+..+.+..|.-++.|...|.|+.+ |||.+.+ .+......+++|++.|+.++|||||+||.+......+|||.|.-+
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekV--AVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD 100 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKV--AVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGD 100 (864)
T ss_pred hhhhcCCceehhhhhhhhccccee--EEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecC
Confidence 334567788899999999999764 5665544 445556789999999999999999999999999999999999999
Q ss_pred CCChhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 518 NGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 518 ~gsL~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
+|+|.+||-++ ..+.+....+++.||+.|+.|+|+. .+|||||||+|+.+.+. -|.+||.|||++-.+..
T Consensus 101 ~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEK------lGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 101 GGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEK------LGLVKLTDFGFSNKFQP 171 (864)
T ss_pred CchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeee------cCceEeeeccccccCCC
Confidence 99999999776 6789999999999999999999999 99999999999987653 78999999999987765
Q ss_pred CCCccccccccCccccchhcccCCCCC-CccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCC
Q 039817 597 DQTRTSTMIRGTMGYMAPEWLRNAPVT-AKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG 675 (725)
Q Consensus 597 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (725)
... .+..+|+..|.|||.+.+..|+ ++.|||||||+||-|++|+.||+.....+ ....+..+ +-.+|
T Consensus 172 G~k--L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE--------TLTmImDC--KYtvP 239 (864)
T KOG4717|consen 172 GKK--LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE--------TLTMIMDC--KYTVP 239 (864)
T ss_pred cch--hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh--------hhhhhhcc--cccCc
Confidence 443 3346799999999999998876 67999999999999999999998653222 11112222 23567
Q ss_pred hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 676 ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 676 ~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.....++++||..||..||++|.+.+||+..
T Consensus 240 shvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 240 SHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred hhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 7889999999999999999999999999865
No 106
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=1.2e-32 Score=258.38 Aligned_cols=239 Identities=23% Similarity=0.285 Sum_probs=199.6
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCC
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 519 (725)
+.+..|++++.|....+ ...||+|.+.+. ..+...++.+|+++-+.|+||||+++|+++.+....||++||.+.|
T Consensus 30 LgkgkFG~vYlarekks--~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~g 107 (281)
T KOG0580|consen 30 LGKGKFGNVYLAREKKS--LFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRG 107 (281)
T ss_pred ccCCccccEeEeeeccC--CcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCc
Confidence 44566777777765544 357899988643 2445678999999999999999999999999999999999999999
Q ss_pred Chhhhhc--cCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcC
Q 039817 520 TLSAFLF--RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKD 597 (725)
Q Consensus 520 sL~~~l~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~ 597 (725)
+|...|. ....+++.....++.|+|.||.|+|.. +++||||||+|+|++. .+..||+|||-+....
T Consensus 108 el~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~-------~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 108 ELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGS-------AGELKIADFGWSVHAP-- 175 (281)
T ss_pred hHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCC-------CCCeeccCCCceeecC--
Confidence 9999998 457789999999999999999999999 9999999999999988 8899999999887543
Q ss_pred CCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChh
Q 039817 598 QTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGAT 677 (725)
Q Consensus 598 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (725)
.......+||..|++||...+..++.+.|+|++|++-||++.|.+||+....++ -+-+-...+-.++..
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e----------tYkrI~k~~~~~p~~ 244 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE----------TYKRIRKVDLKFPST 244 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH----------HHHHHHHccccCCcc
Confidence 222344679999999999999999999999999999999999999998553211 011111112345677
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 678 KFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
......+++..|+..+|.+|.+..|++++
T Consensus 245 is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 245 ISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred cChhHHHHHHHHhccCccccccHHHHhhh
Confidence 78899999999999999999999999876
No 107
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.98 E-value=3.7e-32 Score=292.68 Aligned_cols=237 Identities=24% Similarity=0.313 Sum_probs=181.8
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
...|+.++++++..+ +..||||.+.... ....+.+.+|++++++++|+||+++++++..++..++||||+++++|.+
T Consensus 84 ~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 161 (353)
T PLN00034 84 SGAGGTVYKVIHRPT--GRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEG 161 (353)
T ss_pred CCCCeEEEEEEECCC--CCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccc
Confidence 344556666654433 4578999885432 2335678999999999999999999999999999999999999999865
Q ss_pred hhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 524 ~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
.. ...+..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....... ...
T Consensus 162 ~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~-------~~~~kL~DfG~~~~~~~~~~-~~~ 226 (353)
T PLN00034 162 TH----IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINS-------AKNVKIADFGVSRILAQTMD-PCN 226 (353)
T ss_pred cc----cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcC-------CCCEEEcccccceecccccc-ccc
Confidence 43 346778889999999999999999 9999999999999987 78999999999986543221 112
Q ss_pred ccccCccccchhcccC-----CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH--HcCCCCh
Q 039817 604 MIRGTMGYMAPEWLRN-----APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV--RTGNLGA 676 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~-----~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 676 (725)
...|+..|+|||.+.. ...+.++||||||+++|||++|+.||....... ......... .....+.
T Consensus 227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--------~~~~~~~~~~~~~~~~~~ 298 (353)
T PLN00034 227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--------WASLMCAICMSQPPEAPA 298 (353)
T ss_pred ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--------HHHHHHHHhccCCCCCCC
Confidence 3458999999998743 234568999999999999999999987332111 111111111 1122334
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.....+.+|+.+||+.||++|||+.|++++
T Consensus 299 ~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 299 TASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 556789999999999999999999999987
No 108
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.98 E-value=8.1e-32 Score=285.83 Aligned_cols=235 Identities=25% Similarity=0.287 Sum_probs=186.9
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
.|+.++.+.+..+ +..||||.+... .....+.+..|.+++..+ +||||+++++++...+..++||||+++|+|.
T Consensus 7 ~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~ 84 (320)
T cd05590 7 SFGKVMLARLKES--GRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLM 84 (320)
T ss_pred CCeEEEEEEEcCC--CCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHH
Confidence 3445555544333 457888887642 233456778899998876 6999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+++.+...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....... ..
T Consensus 85 ~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~-------~~~~kL~DfG~~~~~~~~~~-~~ 153 (320)
T cd05590 85 FHIQKSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDH-------EGHCKLADFGMCKEGIFNGK-TT 153 (320)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECC-------CCcEEEeeCCCCeecCcCCC-cc
Confidence 9998888899999999999999999999999 9999999999999987 78999999999875432211 12
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC--CCChhHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG--NLGATKFE 680 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 680 (725)
....|++.|+|||.+.+..++.++||||||+++|||++|+.||...... + +....... ..+.....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----------~-~~~~i~~~~~~~~~~~~~ 221 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-----------D-LFEAILNDEVVYPTWLSQ 221 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----------H-HHHHHhcCCCCCCCCCCH
Confidence 2345899999999999999999999999999999999999999643211 1 11111122 23445667
Q ss_pred HHHHHHHHccCCCCCCCCCH------HHHHHH
Q 039817 681 RITMVGLWCICPQPTLRPSM------KQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~------~evl~~ 706 (725)
.+.+++.+|++.||++||++ ++++++
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred HHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 88999999999999999998 666654
No 109
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.98 E-value=6.5e-32 Score=279.14 Aligned_cols=247 Identities=24% Similarity=0.343 Sum_probs=193.3
Q ss_pred cccHHHHHHHhcccCCc-ceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 445 VFSYQELREATNVFDGQ-EVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~-~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
...++.++++.....+. ...+++|.+.... ....+.+.+|++++++++|+||+++++++...+..++||||+++++|.
T Consensus 15 ~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (268)
T cd05063 15 AGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALD 94 (268)
T ss_pred CCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHH
Confidence 34456677776654433 4578999886442 334567999999999999999999999999999999999999999999
Q ss_pred hhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+++... ..+++..+..++.|++.||+|||+. +++|+||||+||+++. ++.+||+|||++..........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~-------~~~~kl~dfg~~~~~~~~~~~~ 164 (268)
T cd05063 95 KYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNS-------NLECKVSDFGLSRVLEDDPEGT 164 (268)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcC-------CCcEEECCCccceecccccccc
Confidence 999764 5789999999999999999999999 9999999999999987 7889999999998654332211
Q ss_pred cc--ccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhH
Q 039817 602 ST--MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATK 678 (725)
Q Consensus 602 ~~--~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (725)
.. ....+..|+|||++.+..++.++||||||+++|||++ |+.|+...... .....+... .....+...
T Consensus 165 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--------~~~~~i~~~-~~~~~~~~~ 235 (268)
T cd05063 165 YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--------EVMKAINDG-FRLPAPMDC 235 (268)
T ss_pred eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--------HHHHHHhcC-CCCCCCCCC
Confidence 11 1223457999999998889999999999999999997 88888533211 111111110 011222345
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 679 FERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
+..+.+++.+|++.+|++||++.+|++.|+++
T Consensus 236 ~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 236 PSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 67889999999999999999999999999875
No 110
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.98 E-value=3.8e-32 Score=280.65 Aligned_cols=242 Identities=23% Similarity=0.381 Sum_probs=190.4
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccc---ccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..++.+++++...++ ..|+||.+.. ........|.+|++++++++||||+++++++...+..++|+||+++++|.
T Consensus 13 g~~~~v~~~~~~~~~--~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 90 (267)
T cd08228 13 GQFSEVYRATCLLDR--KPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLS 90 (267)
T ss_pred CCCeeEEEEEEeCCC--CEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHH
Confidence 345556666655444 4677886643 22334457899999999999999999999999999999999999999999
Q ss_pred hhhcc----CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 523 AFLFR----QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 523 ~~l~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
+++.. ...++...+..++.|++.||.|||+. +++|+||||+||+++. ++.++|+|||++.......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~-------~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 91 QMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITA-------TGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred HHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcC-------CCCEEECccccceeccchh
Confidence 88853 34578899999999999999999999 9999999999999987 7789999999988764332
Q ss_pred CccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC----
Q 039817 599 TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL---- 674 (725)
Q Consensus 599 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 674 (725)
.. .....++..|+|||.+.+..++.++|+||||+++|||++|+.|+...... ..+.... ......
T Consensus 161 ~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---------~~~~~~~-~~~~~~~~~~ 229 (267)
T cd08228 161 TA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---------LFSLCQK-IEQCDYPPLP 229 (267)
T ss_pred HH-HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc---------HHHHHHH-HhcCCCCCCC
Confidence 21 12234788999999998888999999999999999999999998543211 1111111 111111
Q ss_pred ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 675 GATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 675 ~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
.......+.+++.+||+.+|++||++.+|++.|+++
T Consensus 230 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 230 TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 124557899999999999999999999999999875
No 111
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.97 E-value=7.7e-32 Score=276.98 Aligned_cols=243 Identities=29% Similarity=0.439 Sum_probs=193.8
Q ss_pred cHHHHHHHhcccC-CcceEEEEEEcccccCcc-HHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFD-GQEVEVAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~-~~~~~vavk~l~~~~~~~-~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.|+.++++.+... .....+++|.+....... .+.+.+|++.+++++|+||+++++++..+...++||||+++++|.++
T Consensus 7 ~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 86 (262)
T cd00192 7 AFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDY 86 (262)
T ss_pred CceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHH
Confidence 3445555554433 346789999987654333 67899999999999999999999999999999999999999999999
Q ss_pred hccC---------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccC
Q 039817 525 LFRQ---------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLK 595 (725)
Q Consensus 525 l~~~---------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~ 595 (725)
+... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||.+....
T Consensus 87 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~-------~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 87 LRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGE-------DLVVKISDFGLSRDVY 156 (262)
T ss_pred HhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECC-------CCcEEEcccccccccc
Confidence 9875 6789999999999999999999999 9999999999999987 7899999999998765
Q ss_pred cCCC-ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCC
Q 039817 596 KDQT-RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGN 673 (725)
Q Consensus 596 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (725)
.... .......++..|+|||.+....++.++||||||++++||++ |..|+...... ...+.... .....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~-~~~~~ 227 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE--------EVLEYLRK-GYRLP 227 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHc-CCCCC
Confidence 4332 11223447889999999988889999999999999999999 57777643111 11111111 00112
Q ss_pred CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 674 LGATKFERITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 674 ~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
.+...+..+.+++.+|++.+|++|||+.|++++|+
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 33455688999999999999999999999999885
No 112
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=5.8e-32 Score=281.92 Aligned_cols=241 Identities=21% Similarity=0.268 Sum_probs=187.9
Q ss_pred cHHHHHHHhcccC---CcceEEEEEEcccccCc-cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 447 SYQELREATNVFD---GQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~---~~~~~vavk~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
+|+.+++++..-. .....||+|.+...... ..+.|.+|+.++++++|+||+++++++......++++||+++++|.
T Consensus 17 ~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~ 96 (283)
T cd05091 17 RFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLH 96 (283)
T ss_pred CCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHH
Confidence 3445555543322 24568999998754322 2456889999999999999999999999999999999999999999
Q ss_pred hhhccC----------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEe
Q 039817 523 AFLFRQ----------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIA 586 (725)
Q Consensus 523 ~~l~~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~ 586 (725)
+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~-------~~~~kl~ 166 (283)
T cd05091 97 EFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFD-------KLNVKIS 166 (283)
T ss_pred HHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecC-------CCceEec
Confidence 998521 2478888999999999999999998 9999999999999987 7789999
Q ss_pred eccCccccCcCCCcc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHH
Q 039817 587 DFGLAKLLKKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDW 664 (725)
Q Consensus 587 Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 664 (725)
|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|+..... .+.
T Consensus 167 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----------~~~ 235 (283)
T cd05091 167 DLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----------QDV 235 (283)
T ss_pred ccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----------HHH
Confidence 999988654322211 122335678999999988889999999999999999998 6666643211 111
Q ss_pred HHHHHHc---CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 665 VLYCVRT---GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 665 ~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
. ..... ...+...++.+.+++..|++.+|++||++++|++.|+.
T Consensus 236 ~-~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 236 I-EMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred H-HHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1 11212 22345667889999999999999999999999999974
No 113
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.97 E-value=1.3e-31 Score=281.12 Aligned_cols=231 Identities=27% Similarity=0.368 Sum_probs=181.8
Q ss_pred cceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCC----------
Q 039817 461 QEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQE---------- 529 (725)
Q Consensus 461 ~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------- 529 (725)
....|++|.+.... ....+.|.+|++++++++|+||+++++++..++..++|+||+++++|.+++.+..
T Consensus 45 ~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 124 (296)
T cd05051 45 APVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNS 124 (296)
T ss_pred CceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccC
Confidence 34678999986432 3346689999999999999999999999999999999999999999999997654
Q ss_pred -CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-ccccccc
Q 039817 530 -IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR-TSTMIRG 607 (725)
Q Consensus 530 -~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~g 607 (725)
.+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++........ ......+
T Consensus 125 ~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Nili~~-------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 194 (296)
T cd05051 125 KSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNCLVGK-------NYTIKIADFGMSRNLYSSDYYRVQGRAPL 194 (296)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHc---CccccccchhceeecC-------CCceEEccccceeecccCcceeecCcCCC
Confidence 689999999999999999999998 9999999999999987 789999999998765332221 1223346
Q ss_pred CccccchhcccCCCCCCccceehhHHHHHHHHh--CCcCCCCCCCCccccccCcchHHHHHHHHHc------CCCChhHH
Q 039817 608 TMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF--CKRHTELHRVDEPTLANGMILTDWVLYCVRT------GNLGATKF 679 (725)
Q Consensus 608 t~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 679 (725)
+..|+|||.+.+..++.++||||||+++|||++ +..|+..... ......+...... ...+...+
T Consensus 195 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (296)
T cd05051 195 PIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD--------QQVIENAGHFFRDDGRQIYLPRPPNCP 266 (296)
T ss_pred CceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh--------HHHHHHHHhccccccccccCCCccCCC
Confidence 778999999988889999999999999999998 4455532211 0011111111000 11122345
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
+++.+++.+|++.||++|||+.||++.|+.
T Consensus 267 ~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 267 KDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 789999999999999999999999999863
No 114
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=7.1e-32 Score=281.42 Aligned_cols=255 Identities=24% Similarity=0.359 Sum_probs=190.4
Q ss_pred ccHHHHHHHhcc--cCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEc--CCceeeeeecccCCCh
Q 039817 446 FSYQELREATNV--FDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE--QNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~--~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~e~~~~gsL 521 (725)
.+|+.++.+... -...+..|++|.+........+.|.+|++++++++|+||+++++++.. ....++||||+++++|
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L 94 (284)
T cd05081 15 GNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSL 94 (284)
T ss_pred CCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCH
Confidence 345555555421 123456899999876655666789999999999999999999998754 3467899999999999
Q ss_pred hhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 522 SAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 522 ~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
.+++.+. ..+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||+++........
T Consensus 95 ~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~-------~~~~~l~dfg~~~~~~~~~~~ 164 (284)
T cd05081 95 RDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVES-------ENRVKIGDFGLTKVLPQDKEY 164 (284)
T ss_pred HHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECC-------CCeEEECCCcccccccCCCcc
Confidence 9999764 4689999999999999999999999 9999999999999987 788999999999876433221
Q ss_pred c--ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc----cccCcchHHHHHHHHHcC--
Q 039817 601 T--STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT----LANGMILTDWVLYCVRTG-- 672 (725)
Q Consensus 601 ~--~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-- 672 (725)
. .....++..|+|||.+.+..++.++||||||++++||++|..++......... ..........+.......
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd05081 165 YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGR 244 (284)
T ss_pred eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCc
Confidence 1 11122345699999999888999999999999999999987665322111000 000011111111212111
Q ss_pred -CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 673 -NLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 673 -~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
..+...+..+.+++.+||+.+|++|||+.||++.|+.+
T Consensus 245 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 245 LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 12234567899999999999999999999999999875
No 115
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.97 E-value=1.8e-32 Score=295.01 Aligned_cols=241 Identities=23% Similarity=0.286 Sum_probs=192.2
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..+++.+++|.+..+ +..||||.+.... ......+.+|++++..++|+||+++++++.+++..++||||+++++|
T Consensus 11 ~G~~g~Vy~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 88 (350)
T cd05573 11 RGAFGEVWLVRDKDT--GQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDL 88 (350)
T ss_pred eCCcEEEEEEEECCC--CCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCH
Confidence 345666666666554 3578888876432 24456789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC---
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ--- 598 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~--- 598 (725)
.+++.+...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++.......
T Consensus 89 ~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~-------~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 89 MNLLIRKDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDA-------DGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECC-------CCCEEeecCCCCccCcccCccc
Confidence 99998888899999999999999999999998 9999999999999987 7899999999998654433
Q ss_pred -------------------------CccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcc
Q 039817 599 -------------------------TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEP 653 (725)
Q Consensus 599 -------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~ 653 (725)
........||..|+|||.+.+..++.++||||||+++|||++|+.|+.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~- 237 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE- 237 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH-
Confidence 011223458999999999999999999999999999999999999987543111
Q ss_pred ccccCcchHHHHHHHHHcCCCCh--hHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 039817 654 TLANGMILTDWVLYCVRTGNLGA--TKFERITMVGLWCICPQPTLRPS-MKQVLQM 706 (725)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~cl~~dp~~RPs-~~evl~~ 706 (725)
....+.........+. ...+.+.+++.+|++ +|.+||+ ++|++++
T Consensus 238 -------~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 238 -------TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred -------HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 0001111001112222 247889999999997 9999999 9999987
No 116
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.97 E-value=5.4e-32 Score=277.54 Aligned_cols=235 Identities=24% Similarity=0.340 Sum_probs=188.9
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccc--ccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEK--VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.++.+++++...+ +..+++|.+.. ......+.+.+|++++++++||||+++++++.+++..++||||+++++|.++
T Consensus 12 ~~~~v~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 89 (256)
T cd08529 12 SFGVVFKVVRKAD--KRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKL 89 (256)
T ss_pred CCeEEEEEEEcCC--CcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHH
Confidence 4445555555433 35677887653 2344567899999999999999999999999999999999999999999999
Q ss_pred hccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 525 LFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 525 l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++........ .
T Consensus 90 l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~-------~~~~~l~df~~~~~~~~~~~~-~ 158 (256)
T cd08529 90 LKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDA-------YDNVKIGDLGVAKLLSDNTNF-A 158 (256)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeC-------CCCEEEcccccceeccCccch-h
Confidence 9764 5688999999999999999999998 9999999999999987 788999999998866543222 1
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC---CCChhHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG---NLGATKF 679 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 679 (725)
....++..|+|||++.+..++.++||||||++++||++|+.|+...... . .......+ ..+....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~ 226 (256)
T cd08529 159 NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-----------A-LILKIIRGVFPPVSQMYS 226 (256)
T ss_pred hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-----------H-HHHHHHcCCCCCCccccC
Confidence 2245788999999999999999999999999999999999998643211 1 11111112 2333556
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..+.+++.+||+.+|++||++.+++++
T Consensus 227 ~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 227 QQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 789999999999999999999999875
No 117
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.97 E-value=7.4e-32 Score=278.92 Aligned_cols=247 Identities=25% Similarity=0.380 Sum_probs=193.0
Q ss_pred cccHHHHHHHhcccCCc-ceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 445 VFSYQELREATNVFDGQ-EVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~-~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
...++.+++|....++. ...|+||.+... .....++|..|+.++++++||||+++++++..+...++||||+++++|.
T Consensus 14 ~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T cd05065 14 AGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALD 93 (269)
T ss_pred CCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHH
Confidence 34566677777665553 467999998654 2334568999999999999999999999999999999999999999999
Q ss_pred hhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+++... ..+++.++..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++..........
T Consensus 94 ~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~-------~~~~kl~dfg~~~~~~~~~~~~ 163 (269)
T cd05065 94 SFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNS-------NLVCKVSDFGLSRFLEDDTSDP 163 (269)
T ss_pred HHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcC-------CCcEEECCCccccccccCcccc
Confidence 999754 5689999999999999999999998 9999999999999977 7889999999988654322211
Q ss_pred c-c-ccc--cCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCCh
Q 039817 602 S-T-MIR--GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676 (725)
Q Consensus 602 ~-~-~~~--gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (725)
. . ... .+..|+|||.+.+..++.++||||||+++||+++ |..|+...... .....+.... ....+.
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--------~~~~~i~~~~-~~~~~~ 234 (269)
T cd05065 164 TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------DVINAIEQDY-RLPPPM 234 (269)
T ss_pred ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcCC-cCCCcc
Confidence 1 1 111 2357999999999999999999999999999886 88887533211 1111111100 112233
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
..+..+.+++.+||+.+|.+||++.+|+.+|+++
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 235 DCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 4567789999999999999999999999999864
No 118
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.97 E-value=2e-32 Score=258.00 Aligned_cols=236 Identities=23% Similarity=0.293 Sum_probs=186.0
Q ss_pred ceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcC-----CceeeeeecccCCChhhhhccC----CCCC
Q 039817 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ-----NHQLLVYELMKNGTLSAFLFRQ----EIPT 532 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~~lV~e~~~~gsL~~~l~~~----~~l~ 532 (725)
+..+|+|++...+.++.+..++|++..++++|||++++++++..+ .+.+|++.|...|||.+.+... ..++
T Consensus 46 ~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~s 125 (302)
T KOG2345|consen 46 GHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVS 125 (302)
T ss_pred ccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccC
Confidence 356799998877777888999999999999999999999998643 3589999999999999998653 4689
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc--------ccc
Q 039817 533 WDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT--------STM 604 (725)
Q Consensus 533 ~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~--------~~~ 604 (725)
+.+.++|+.++++||.+||+. .++++||||||.|||+.+ .+.+++.|||.+....-.-... -..
T Consensus 126 E~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~-------~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~ 197 (302)
T KOG2345|consen 126 EAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSD-------SGLPVLMDLGSATQAPIQIEGSRQALRLQEWAE 197 (302)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecC-------CCceEEEeccCccccceEeechHHHHHHHHHHH
Confidence 999999999999999999997 336999999999999987 7899999999987653221111 112
Q ss_pred cccCccccchhccc---CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 605 IRGTMGYMAPEWLR---NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 605 ~~gt~~y~aPE~~~---~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
...|..|+|||.+. +...++++|||||||+||+|+.|..||+........++-.....+. ...-....++.
T Consensus 198 e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~------s~P~~~~yse~ 271 (302)
T KOG2345|consen 198 ERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQI------SIPNSSRYSEA 271 (302)
T ss_pred HhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeecccc------ccCCCCCccHH
Confidence 34788999999985 4467899999999999999999999998654322111100000000 00111237889
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
+.+++.+|++.||.+||++.+++..++.+.
T Consensus 272 l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 272 LHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred HHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 999999999999999999999999998754
No 119
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7e-33 Score=292.52 Aligned_cols=244 Identities=26% Similarity=0.343 Sum_probs=201.7
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
+...+|+.++.|.+.-+ .+.+|||-+...+....+-+.+|+.+-++++|+|||+++|.|.+++.+-+.||-.+||||.
T Consensus 583 LGKGTYG~VYA~RD~~t--qvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 583 LGKGTYGTVYAARDMDT--QVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred eecCceeEEEeeccccc--eeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 34568888888877644 4788999997766666777899999999999999999999999999999999999999999
Q ss_pred hhhccC-CCC--CHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 523 AFLFRQ-EIP--TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 523 ~~l~~~-~~l--~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
+.|... +++ .+...--+..||++||.|||+. .|||||||-+|+|++. -.|.+||+|||-++.+..-..
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNT------ySGvlKISDFGTsKRLAginP 731 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNT------YSGVLKISDFGTSKRLAGINP 731 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEee------ccceEEecccccchhhccCCc
Confidence 999776 555 6777888899999999999999 9999999999999975 288999999999987654433
Q ss_pred ccccccccCccccchhcccCC--CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChh
Q 039817 600 RTSTMIRGTMGYMAPEWLRNA--PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGAT 677 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~~--~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (725)
. ...+-||..|||||++..+ .|..++|||||||.+.||.||++||..-..... .+. .+--.....++|.+
T Consensus 732 ~-TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA----AMF---kVGmyKvHP~iPee 803 (1226)
T KOG4279|consen 732 C-TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA----AMF---KVGMYKVHPPIPEE 803 (1226)
T ss_pred c-ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH----hhh---hhcceecCCCCcHH
Confidence 3 3345699999999999765 588999999999999999999999964322110 000 01111224678888
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 039817 678 KFERITMVGLWCICPQPTLRPSMKQVLQ 705 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RPs~~evl~ 705 (725)
..++.+.++++|+.+||.+||+++++++
T Consensus 804 lsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 804 LSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 9999999999999999999999999985
No 120
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=1e-31 Score=291.98 Aligned_cols=247 Identities=24% Similarity=0.370 Sum_probs=191.8
Q ss_pred ccccHHHHHHHhccc---CCcceEEEEEEcccccC-ccHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccC
Q 039817 444 KVFSYQELREATNVF---DGQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKN 518 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~---~~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~ 518 (725)
...+|+.|++++..- ......||||.++.... ...+.+.+|++++.++. |+|||+++|+|...+..++||||+++
T Consensus 46 G~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~ 125 (401)
T cd05107 46 GSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRY 125 (401)
T ss_pred cCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCC
Confidence 345677777766432 22346799999975432 23457899999999997 99999999999999999999999999
Q ss_pred CChhhhhccC----------------------------------------------------------------------
Q 039817 519 GTLSAFLFRQ---------------------------------------------------------------------- 528 (725)
Q Consensus 519 gsL~~~l~~~---------------------------------------------------------------------- 528 (725)
|+|.+++++.
T Consensus 126 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (401)
T cd05107 126 GDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIE 205 (401)
T ss_pred CcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhh
Confidence 9999998643
Q ss_pred ----------------------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCC
Q 039817 529 ----------------------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNN 580 (725)
Q Consensus 529 ----------------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~ 580 (725)
..+++.....++.|++.||.|||+. +++||||||+|||++. +
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~~-------~ 275 (401)
T cd05107 206 SSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLICE-------G 275 (401)
T ss_pred ccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEeC-------C
Confidence 1356778889999999999999998 9999999999999987 7
Q ss_pred CceEEeeccCccccCcCCCc-cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccC
Q 039817 581 YITKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANG 658 (725)
Q Consensus 581 ~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~ 658 (725)
+.+||+|||+++........ ......++..|+|||.+.+..++.++||||||++++||++ |+.|+......
T Consensus 276 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~------- 348 (401)
T cd05107 276 KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN------- 348 (401)
T ss_pred CEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch-------
Confidence 78999999999865332211 1112346788999999998889999999999999999998 77776532211
Q ss_pred cchHHHHHHHHHcC---CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 659 MILTDWVLYCVRTG---NLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 659 ~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
+........+ ..+......+.+++.+||+.+|.+||++++|++.|+++.
T Consensus 349 ----~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 349 ----EQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ----HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1111111111 233345678999999999999999999999999998764
No 121
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.97 E-value=1.4e-31 Score=274.81 Aligned_cols=239 Identities=25% Similarity=0.377 Sum_probs=185.5
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
.++.++.+... ....+++|.+... ......|.+|++++++++|+||+++++++...+..++||||+++++|.+++.
T Consensus 16 ~~~~v~~~~~~---~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 91 (256)
T cd05059 16 QFGVVHLGKWR---GKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLR 91 (256)
T ss_pred CCceEEEeEec---CCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHH
Confidence 34444444332 2346788887543 2345678999999999999999999999999999999999999999999997
Q ss_pred cC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 527 RQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 527 ~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
.. ..+++..+..++.|++.||+|||+. +++||||||+||+++. ++.+||+|||+++.............
T Consensus 92 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~-------~~~~kl~dfg~~~~~~~~~~~~~~~~ 161 (256)
T cd05059 92 ERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGE-------DNVVKVSDFGLARYVLDDQYTSSQGT 161 (256)
T ss_pred hcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECC-------CCcEEECCcccceecccccccccCCC
Confidence 64 5689999999999999999999999 9999999999999987 78899999999986543322211112
Q ss_pred ccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHH
Q 039817 606 RGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITM 684 (725)
Q Consensus 606 ~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 684 (725)
.++..|+|||.+.+..++.++||||||+++|||++ |+.|+......+ ....+... .....+...+..+.+
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~ 232 (256)
T cd05059 162 KFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--------VVESVSAG-YRLYRPKLAPTEVYT 232 (256)
T ss_pred CCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--------HHHHHHcC-CcCCCCCCCCHHHHH
Confidence 24457999999998899999999999999999999 677775432111 11111110 011233456778999
Q ss_pred HHHHccCCCCCCCCCHHHHHHHhc
Q 039817 685 VGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 685 l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
++.+||+.+|++|||+.|++++|.
T Consensus 233 li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 233 IMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred HHHHHhcCChhhCcCHHHHHHHhC
Confidence 999999999999999999999873
No 122
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=5.1e-32 Score=283.47 Aligned_cols=247 Identities=26% Similarity=0.343 Sum_probs=191.2
Q ss_pred ccHHHHHHHhcccC---CcceEEEEEEcccccC-ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFD---GQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~---~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..|+.|++|++... .....+++|.+..... ...+.+.+|++++++++||||+++++.+..++..++|+||+++++|
T Consensus 11 g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 90 (290)
T cd05045 11 GEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 90 (290)
T ss_pred cCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCH
Confidence 45566666665332 1235688888764332 3346789999999999999999999999999999999999999999
Q ss_pred hhhhccC------------------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCcccc
Q 039817 522 SAFLFRQ------------------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITI 577 (725)
Q Consensus 522 ~~~l~~~------------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~ 577 (725)
.+++... ..+++..++.++.|++.||.|||+. +++||||||+||++++
T Consensus 91 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~nill~~----- 162 (290)
T cd05045 91 RSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARNVLVAE----- 162 (290)
T ss_pred HHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---CeehhhhhhheEEEcC-----
Confidence 9987532 2468899999999999999999998 9999999999999987
Q ss_pred CCCCceEEeeccCccccCcCCCc-cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCcccc
Q 039817 578 DNNYITKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTL 655 (725)
Q Consensus 578 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~ 655 (725)
++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||++++||++ |..|+......
T Consensus 163 --~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---- 236 (290)
T cd05045 163 --GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE---- 236 (290)
T ss_pred --CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH----
Confidence 788999999999865332221 1122345678999999988889999999999999999998 88877532110
Q ss_pred ccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 656 ANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
.+.+...... ....+......+.+++.+|++.+|++||++.|+++.|+++.
T Consensus 237 ----~~~~~~~~~~-~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 237 ----RLFNLLKTGY-RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred ----HHHHHHhCCC-CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 1111111110 12234455678999999999999999999999999998764
No 123
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.97 E-value=1.9e-31 Score=279.49 Aligned_cols=243 Identities=28% Similarity=0.386 Sum_probs=189.2
Q ss_pred cHHHHHHHhcccC---CcceEEEEEEcccc-cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 447 SYQELREATNVFD---GQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 447 ~~~~l~~a~~~~~---~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.++.++++..... .....+++|.+... .......+.+|++++.++ +|+||+++++++..++..+++|||+++|+|
T Consensus 24 ~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L 103 (293)
T cd05053 24 AFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNL 103 (293)
T ss_pred ccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcH
Confidence 3445554443221 33467899988643 223445789999999999 799999999999999999999999999999
Q ss_pred hhhhccC----------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEE
Q 039817 522 SAFLFRQ----------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKI 585 (725)
Q Consensus 522 ~~~l~~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl 585 (725)
.+++... ..+++..++.++.|++.||.|||+. +|+|+||||+||+++. ++.+||
T Consensus 104 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~-------~~~~kL 173 (293)
T cd05053 104 RDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTE-------DHVMKI 173 (293)
T ss_pred HHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcC-------CCeEEe
Confidence 9998532 4578999999999999999999998 9999999999999987 789999
Q ss_pred eeccCccccCcCCCcc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHH
Q 039817 586 ADFGLAKLLKKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTD 663 (725)
Q Consensus 586 ~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~ 663 (725)
+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|+..... .+
T Consensus 174 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----------~~ 242 (293)
T cd05053 174 ADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-----------EE 242 (293)
T ss_pred CccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH-----------HH
Confidence 9999998654432211 112335678999999998899999999999999999997 7777653211 11
Q ss_pred HHHHHHHc---CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 664 WVLYCVRT---GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 664 ~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
....... ...+......+.+++.+|++.+|++|||+.|+++.|+++.
T Consensus 243 -~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 -LFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -HHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1111111 1233455678999999999999999999999999998764
No 124
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=4.7e-32 Score=280.47 Aligned_cols=245 Identities=27% Similarity=0.329 Sum_probs=183.2
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.+|+.++++...-......+++|.++... ......|.+|+.++++++||||+++++++.+....++||||+++|+|.++
T Consensus 6 G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 85 (269)
T cd05087 6 GWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGY 85 (269)
T ss_pred cCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHH
Confidence 34566666654333445678999886543 23345789999999999999999999999999999999999999999999
Q ss_pred hccC-----CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 525 LFRQ-----EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 525 l~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
+... ..+++..+..++.|+++||.|||+. +++|+||||+||+++. ++.+||+|||+++.......
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~-------~~~~kL~dfg~~~~~~~~~~ 155 (269)
T cd05087 86 LRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTA-------DLTVKIGDYGLSHNKYKEDY 155 (269)
T ss_pred HHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcC-------CCcEEECCccccccccCcce
Confidence 9643 2456778889999999999999999 9999999999999987 78899999999975443322
Q ss_pred cc-ccccccCccccchhcccCC-------CCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHH--
Q 039817 600 RT-STMIRGTMGYMAPEWLRNA-------PVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYC-- 668 (725)
Q Consensus 600 ~~-~~~~~gt~~y~aPE~~~~~-------~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 668 (725)
.. .....++..|+|||++.+. .++.++||||||+++|||++ |+.|+....... .........
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~~ 228 (269)
T cd05087 156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ-------VLTYTVREQQL 228 (269)
T ss_pred eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH-------HHHHHhhcccC
Confidence 11 1223467889999988642 35789999999999999996 988885432111 000000000
Q ss_pred -HHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 669 -VRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 669 -~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
...........+.+.+++..|+ .+|++|||++||++.|+
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 0011112234567888999998 58999999999999885
No 125
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.97 E-value=9.2e-32 Score=277.95 Aligned_cols=246 Identities=25% Similarity=0.379 Sum_probs=192.9
Q ss_pred ccHHHHHHHhcccCC-cceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 446 FSYQELREATNVFDG-QEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~-~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
..|+.++.+.....+ ....+|+|.++... ....+.|.+|+.++++++||||+++++++..++..++||||+++++|.+
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (267)
T cd05066 15 GEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDA 94 (267)
T ss_pred cCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHH
Confidence 345667777654443 45688999886432 2345679999999999999999999999999999999999999999999
Q ss_pred hhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 524 FLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 524 ~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
++.+. ..+++.++..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||++...........
T Consensus 95 ~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~-------~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd05066 95 FLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNS-------NLVCKVSDFGLSRVLEDDPEAAY 164 (267)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECC-------CCeEEeCCCCcccccccccceee
Confidence 99765 4679999999999999999999999 9999999999999977 78999999999987654332211
Q ss_pred c--ccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHH
Q 039817 603 T--MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKF 679 (725)
Q Consensus 603 ~--~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (725)
. ...++..|+|||++.+..++.++||||||++++|+++ |..|+....... ....+.... ....+...+
T Consensus 165 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--------~~~~~~~~~-~~~~~~~~~ 235 (267)
T cd05066 165 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--------VIKAIEEGY-RLPAPMDCP 235 (267)
T ss_pred ecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--------HHHHHhCCC-cCCCCCCCC
Confidence 1 1223567999999998889999999999999999886 888875432110 111111110 112223456
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
+.+.+++.+|++.+|.+||+|.++++.|+++
T Consensus 236 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 236 AALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 7889999999999999999999999999864
No 126
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.97 E-value=1.1e-31 Score=275.81 Aligned_cols=225 Identities=24% Similarity=0.393 Sum_probs=176.1
Q ss_pred eEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCC-CCCHHHHHHHHH
Q 039817 463 VEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQE-IPTWDKRVEIAL 541 (725)
Q Consensus 463 ~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~l~~~~~~~i~~ 541 (725)
..|++|.+...... ...|.+|+.++++++|+||+++++++.. ...++||||+++++|.+++.+.. .+++..+..++.
T Consensus 31 ~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 108 (259)
T cd05037 31 VSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAK 108 (259)
T ss_pred eeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHH
Confidence 56788877654333 6789999999999999999999999988 78899999999999999998765 789999999999
Q ss_pred HHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCC-
Q 039817 542 GIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA- 620 (725)
Q Consensus 542 qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~- 620 (725)
|++.||+|||+. +|+||||||+||+++.+.........+||+|||++...... ....++..|+|||++...
T Consensus 109 ~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~~~y~aPE~~~~~~ 180 (259)
T cd05037 109 QLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR-----EERVERIPWIAPECIRNGQ 180 (259)
T ss_pred HHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCCcccccccc-----cccccCCCccChhhhcCCC
Confidence 999999999998 99999999999999873211011227999999999865431 123366789999998876
Q ss_pred -CCCCccceehhHHHHHHHHhC-CcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCC
Q 039817 621 -PVTAKVDVYSFGVMLLEIIFC-KRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRP 698 (725)
Q Consensus 621 -~~~~ksDv~S~G~vl~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP 698 (725)
.++.++||||||+++|||++| ..|+...... +...........+......+.+++.+||+.+|.+||
T Consensus 181 ~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 249 (259)
T cd05037 181 ASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-----------EKERFYQDQHRLPMPDCAELANLINQCWTYDPTKRP 249 (259)
T ss_pred CCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-----------hHHHHHhcCCCCCCCCchHHHHHHHHHhccChhhCC
Confidence 789999999999999999995 4444332111 011111112223333347889999999999999999
Q ss_pred CHHHHHHHhc
Q 039817 699 SMKQVLQMLE 708 (725)
Q Consensus 699 s~~evl~~L~ 708 (725)
|+.+|++.|+
T Consensus 250 t~~~il~~l~ 259 (259)
T cd05037 250 SFRAILRDLN 259 (259)
T ss_pred CHHHHHHhcC
Confidence 9999999874
No 127
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.97 E-value=1.3e-31 Score=280.98 Aligned_cols=232 Identities=27% Similarity=0.409 Sum_probs=180.3
Q ss_pred CCcceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCC--------
Q 039817 459 DGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQE-------- 529 (725)
Q Consensus 459 ~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~-------- 529 (725)
++....||+|.+... .......|.+|++++++++|+||+++++++...+..++||||+++++|.+++....
T Consensus 41 ~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 120 (295)
T cd05097 41 DGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHA 120 (295)
T ss_pred CCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhcccccccccc
Confidence 345567999998653 23345679999999999999999999999999999999999999999999985431
Q ss_pred ----CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-cccc
Q 039817 530 ----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR-TSTM 604 (725)
Q Consensus 530 ----~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~-~~~~ 604 (725)
.+++..+..++.|+++||+|||+. +++|+||||+||+++. ++.+||+|||++......... ....
T Consensus 121 ~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nill~~-------~~~~kl~dfg~~~~~~~~~~~~~~~~ 190 (295)
T cd05097 121 NNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCLVGN-------HYTIKIADFGMSRNLYSGDYYRIQGR 190 (295)
T ss_pred ccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEEEcC-------CCcEEecccccccccccCcceeccCc
Confidence 368889999999999999999999 9999999999999987 778999999999765332211 1112
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhC--CcCCCCCCCCccccccCcchHHHHHHHHHc------CCCCh
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC--KRHTELHRVDEPTLANGMILTDWVLYCVRT------GNLGA 676 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 676 (725)
..++..|+|||.+.+..++.++||||||++++||+++ ..|+....... ........... ...+.
T Consensus 191 ~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 262 (295)
T cd05097 191 AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ--------VIENTGEFFRNQGRQIYLSQTP 262 (295)
T ss_pred CcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH--------HHHHHHHhhhhccccccCCCCC
Confidence 3356789999999988999999999999999999984 44544321110 11111111110 11233
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
..++.+.+++.+|++.+|++||++++|++.|+
T Consensus 263 ~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 263 LCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 45678999999999999999999999999986
No 128
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97 E-value=2.1e-31 Score=283.56 Aligned_cols=242 Identities=23% Similarity=0.246 Sum_probs=189.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
.|++++.+.+... +..+|+|.++... ....+.+.+|+.++.++ +|+||+++++++...+..++||||+++++|.
T Consensus 7 ~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 84 (327)
T cd05617 7 SYAKVLLVRLKKN--DQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLM 84 (327)
T ss_pred CCeEEEEEEECCC--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHH
Confidence 3445555544333 4578888886432 23345688999999888 6999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+++.+.+.+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....... ..
T Consensus 85 ~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~-------~~~~kl~Dfg~~~~~~~~~~-~~ 153 (327)
T cd05617 85 FHMQRQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDA-------DGHIKLTDYGMCKEGLGPGD-TT 153 (327)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeC-------CCCEEEeccccceeccCCCC-ce
Confidence 9998888899999999999999999999999 9999999999999987 78899999999875322211 12
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCChhHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGATKFE 680 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 680 (725)
....||..|+|||.+.+..++.++||||||+++|||++|+.||....... .....+........ ...+.....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~~~~~ 228 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNP-----DMNTEDYLFQVILEKPIRIPRFLSV 228 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCc-----ccccHHHHHHHHHhCCCCCCCCCCH
Confidence 23558999999999999999999999999999999999999996533221 11112222222222 234455667
Q ss_pred HHHHHHHHccCCCCCCCCC------HHHHHHH
Q 039817 681 RITMVGLWCICPQPTLRPS------MKQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs------~~evl~~ 706 (725)
.+.+++.+||+.||++||+ +++++++
T Consensus 229 ~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 229 KASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 8899999999999999998 4577655
No 129
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=1.3e-31 Score=284.08 Aligned_cols=236 Identities=26% Similarity=0.258 Sum_probs=188.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
+|+.++++.+.. .+..+|||.+... .....+.+..|.+++..+ +||||+++++++...+..++||||+++++|.
T Consensus 7 ~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 84 (318)
T cd05570 7 SFGKVLLAELKG--TDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLM 84 (318)
T ss_pred CCeEEEEEEECC--CCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHH
Confidence 445555554433 3457889988643 233456678899999887 7999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+++.+...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++....... ..
T Consensus 85 ~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~-------~~~~kl~Dfg~~~~~~~~~~-~~ 153 (318)
T cd05570 85 FHIQRSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDS-------EGHIKIADFGMCKEGILGGV-TT 153 (318)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECC-------CCcEEecccCCCeecCcCCC-cc
Confidence 9998888899999999999999999999999 9999999999999987 78999999999875322221 12
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH-HcCCCChhHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV-RTGNLGATKFER 681 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 681 (725)
....|+..|+|||.+.+..++.++||||||+++|||++|+.||...... ....... .....+....+.
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~-----------~~~~~i~~~~~~~~~~~~~~ 222 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED-----------ELFQSILEDEVRYPRWLSKE 222 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH-----------HHHHHHHcCCCCCCCcCCHH
Confidence 2345899999999999999999999999999999999999998643211 1111111 112234456778
Q ss_pred HHHHHHHccCCCCCCCCCH-----HHHHHH
Q 039817 682 ITMVGLWCICPQPTLRPSM-----KQVLQM 706 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~-----~evl~~ 706 (725)
+.+++.+||+.||++||++ .+++++
T Consensus 223 ~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 223 AKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 9999999999999999999 888765
No 130
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.97 E-value=9.7e-32 Score=276.83 Aligned_cols=246 Identities=28% Similarity=0.436 Sum_probs=186.8
Q ss_pred ccHHHHHHHhccc-CCcceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEE-cCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVF-DGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCI-EQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~-~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~-~~~~~~lV~e~~~~gsL~ 522 (725)
.+|+.++++...- .+....+|+|.+... .....+.+.+|+.+++.++||||+++++++. .++..++|+||+++++|.
T Consensus 6 g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~ 85 (262)
T cd05058 6 GHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLR 85 (262)
T ss_pred cCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHH
Confidence 3455566555432 234578999998543 2334568899999999999999999999876 455688999999999999
Q ss_pred hhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-
Q 039817 523 AFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR- 600 (725)
Q Consensus 523 ~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~- 600 (725)
+++.+. ..+++..+..++.|+++||.|||+. +++||||||+||+++. ++.+||+|||+++........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~-------~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 86 NFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDE-------SFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcC-------CCcEEECCccccccccCCccee
Confidence 999764 4567888899999999999999998 9999999999999987 788999999999865332211
Q ss_pred --cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCCh
Q 039817 601 --TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGA 676 (725)
Q Consensus 601 --~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 676 (725)
......++..|+|||.+.+..++.++||||||+++|||++|+.++..... ..+........ ...+.
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 225 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD----------SFDITVYLLQGRRLLQPE 225 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC----------HHHHHHHHhcCCCCCCCC
Confidence 11123356789999999888999999999999999999996655432111 01111111111 11222
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
..++.+.+++..||+.+|++||++.+|++.|+++.
T Consensus 226 ~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 226 YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 34578999999999999999999999999998754
No 131
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.97 E-value=9.1e-32 Score=279.88 Aligned_cols=250 Identities=23% Similarity=0.324 Sum_probs=193.6
Q ss_pred ccccHHHHHHHhcccCCcc--eEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 444 KVFSYQELREATNVFDGQE--VEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~--~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
...+|+.+++|+..-++.. +.||+|.++.. .....+++.+|+.++++++|+||+++++++... ..++++||+++|+
T Consensus 16 g~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l~~~~~~~g~ 94 (279)
T cd05109 16 GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQLVTQLMPYGC 94 (279)
T ss_pred CCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEEEEEcCCCCC
Confidence 3456777887776555443 46899988643 333456789999999999999999999999754 5679999999999
Q ss_pred hhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 521 LSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 521 L~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||++++ ++.+||+|||+++.......
T Consensus 95 l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~-------~~~~kL~dfG~~~~~~~~~~ 164 (279)
T cd05109 95 LLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKS-------PNHVKITDFGLARLLDIDET 164 (279)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcC-------CCcEEECCCCceeecccccc
Confidence 99999764 5689999999999999999999999 9999999999999977 67899999999987643322
Q ss_pred cc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChh
Q 039817 600 RT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGAT 677 (725)
Q Consensus 600 ~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (725)
.. .....++..|+|||.+.+..++.++||||||+++|||++ |..|+..... ......+.. ......+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~-~~~~~~~~~ 235 (279)
T cd05109 165 EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--------REIPDLLEK-GERLPQPPI 235 (279)
T ss_pred eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHC-CCcCCCCcc
Confidence 11 111234678999999998899999999999999999998 7777753221 111111111 111122334
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 039817 678 KFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEV 713 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 713 (725)
....+.+++.+||+.||++||++.++++.|+.+...
T Consensus 236 ~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 236 CTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 567889999999999999999999999999876543
No 132
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=7.1e-32 Score=278.65 Aligned_cols=244 Identities=24% Similarity=0.402 Sum_probs=189.8
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
.++.++++.+..++ ..++||.+... ......+|.+|++++++++|+||+++++++..++..+++|||+++++|.+
T Consensus 14 ~~g~v~~~~~~~~~--~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~ 91 (267)
T cd08229 14 QFSEVYRATCLLDG--VPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSR 91 (267)
T ss_pred CCeEEEEEeecCCC--ceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHH
Confidence 34455555544443 56788876532 22344678999999999999999999999999999999999999999999
Q ss_pred hhcc----CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 524 FLFR----QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 524 ~l~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
++.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~-------~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd08229 92 MIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITA-------TGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred HHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcC-------CCCEEECcchhhhccccCCc
Confidence 8863 35689999999999999999999999 9999999999999987 78899999999886543322
Q ss_pred ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC-ChhH
Q 039817 600 RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL-GATK 678 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 678 (725)
. .....++..|+|||++.+..++.++||||||+++|||++|..|+....... ......+... ..... ....
T Consensus 162 ~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~ 233 (267)
T cd08229 162 A-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL------YSLCKKIEQC-DYPPLPSDHY 233 (267)
T ss_pred c-cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH------HHHhhhhhcC-CCCCCCcccc
Confidence 1 122357889999999998889999999999999999999999986432111 0111111110 01111 2245
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 679 FERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
.+.+.+++.+|++.+|++||||.+|+++++++
T Consensus 234 ~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 234 SEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred cHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 67899999999999999999999999999865
No 133
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.97 E-value=1.3e-31 Score=276.11 Aligned_cols=240 Identities=26% Similarity=0.336 Sum_probs=188.4
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
..++++++.|++.- ...|++|.+... ....+.|.+|++++++++|+||+++++++. .+..++||||+++++|.++
T Consensus 16 ~g~~~~v~~~~~~~---~~~valK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~ 90 (262)
T cd05071 16 QGCFGEVWMGTWNG---TTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDF 90 (262)
T ss_pred CCCCCcEEEEEecC---CceEEEEecccC-ccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHH
Confidence 34566777775432 235899998753 334568999999999999999999999875 4567899999999999999
Q ss_pred hccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 525 LFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 525 l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+.+. ..+++..+..++.|+++||+|||+. +++|+||||+||+++. ++.+||+|||.++..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~-------~~~~~L~dfg~~~~~~~~~~~~~ 160 (262)
T cd05071 91 LKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGE-------NLVCKVADFGLARLIEDNEYTAR 160 (262)
T ss_pred HhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcC-------CCcEEeccCCceeeccccccccc
Confidence 9753 4579999999999999999999998 9999999999999987 78899999999986654332222
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCChhHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGATKF 679 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 679 (725)
....++..|+|||+..+..++.++||||||+++|||++ |..|+...... +........ ...+...+
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 229 (262)
T cd05071 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----------EVLDQVERGYRMPCPPECP 229 (262)
T ss_pred cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH-----------HHHHHHhcCCCCCCccccC
Confidence 22346678999999988899999999999999999999 66666532110 111111111 12234566
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
+.+.+++.+|++.+|++||+++++++.|+..
T Consensus 230 ~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 230 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 7899999999999999999999999999864
No 134
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=1.7e-31 Score=282.90 Aligned_cols=236 Identities=26% Similarity=0.257 Sum_probs=185.3
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
.|+.++.+.+..+ +..||+|.++... ....+.+..|.+++... +|+||+++++++..++..++||||+++|+|.
T Consensus 7 ~~g~V~~~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~ 84 (316)
T cd05620 7 SFGKVLLAELKGK--GEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLM 84 (316)
T ss_pred CCeEEEEEEECCC--CCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHH
Confidence 4555666555433 4578888886431 23455677888888764 8999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+++.....+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++....... ..
T Consensus 85 ~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~-------~~~~kl~Dfg~~~~~~~~~~-~~ 153 (316)
T cd05620 85 FHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDR-------DGHIKIADFGMCKENVFGDN-RA 153 (316)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECC-------CCCEEeCccCCCeecccCCC-ce
Confidence 9998888899999999999999999999999 9999999999999987 78899999999874322111 12
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERI 682 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 682 (725)
....|+..|+|||.+.+..++.++||||||+++|||++|+.|+...... .+.+.+. ......+......+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--------~~~~~~~--~~~~~~~~~~~~~~ 223 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--------ELFESIR--VDTPHYPRWITKES 223 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHH--hCCCCCCCCCCHHH
Confidence 3355899999999999999999999999999999999999998643211 1111111 11123344456788
Q ss_pred HHHHHHccCCCCCCCCCHH-HHHH
Q 039817 683 TMVGLWCICPQPTLRPSMK-QVLQ 705 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~-evl~ 705 (725)
.+++.+||+.||++||++. ++++
T Consensus 224 ~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 224 KDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred HHHHHHHccCCHHHcCCChHHHHc
Confidence 9999999999999999984 6653
No 135
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.97 E-value=3.1e-31 Score=271.03 Aligned_cols=241 Identities=24% Similarity=0.339 Sum_probs=187.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC-ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
+++.++++.. .++..+++|.+..... .....|.+|++++++++|+||+++++++...+..++||||+++++|.+++
T Consensus 7 ~~g~vy~~~~---~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 83 (250)
T cd05085 7 NFGEVFKGTL---KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFL 83 (250)
T ss_pred CCceEEEEEe---cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHH
Confidence 4455555542 2345789998765432 23457899999999999999999999999999999999999999999998
Q ss_pred ccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 526 FRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 526 ~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++.............
T Consensus 84 ~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~-------~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 84 RKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGE-------NNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred HhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcC-------CCeEEECCCccceeccccccccCCC
Confidence 754 4678999999999999999999998 9999999999999987 7889999999987543322222122
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHH
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERIT 683 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 683 (725)
..++..|+|||++.+..++.++||||||+++||+++ |..|+...... .....+... .....+...+..+.
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~ 224 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--------QAREQVEKG-YRMSCPQKCPDDVY 224 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHcC-CCCCCCCCCCHHHH
Confidence 234567999999998889999999999999999998 88887533111 011111110 01123345668899
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 684 MVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 684 ~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
+++.+|++.+|++||++.|++++|.+
T Consensus 225 ~li~~~l~~~p~~Rp~~~~l~~~l~~ 250 (250)
T cd05085 225 KVMQRCWDYKPENRPKFSELQKELAA 250 (250)
T ss_pred HHHHHHcccCcccCCCHHHHHHHhcC
Confidence 99999999999999999999999863
No 136
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=2e-31 Score=274.51 Aligned_cols=240 Identities=22% Similarity=0.231 Sum_probs=187.9
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC-----ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG-----DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~-----~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
+++.++.+.+..+ +..+++|.+..... ...+.+.+|++++++++||||+++++++..++..++|+||+++++|
T Consensus 14 ~~~~vy~~~~~~~--~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 91 (263)
T cd06625 14 AFGRVYLCYDVDT--GRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSV 91 (263)
T ss_pred CceEEEEEEEcCC--CcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcH
Confidence 3444555544333 35678887653221 1235688999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++.+...+++.....++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||+++.........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~-------~~~~~l~dfg~~~~~~~~~~~~ 161 (263)
T cd06625 92 KDQLKAYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDS-------AGNVKLGDFGASKRLQTICSSG 161 (263)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcC-------CCCEEEeecccceecccccccc
Confidence 99998888889999999999999999999999 9999999999999987 7889999999987654322211
Q ss_pred c--cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHH
Q 039817 602 S--TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKF 679 (725)
Q Consensus 602 ~--~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (725)
. ....++..|+|||.+.+..++.++||||||+++|||++|+.|+....... .............++....
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 233 (263)
T cd06625 162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA--------AIFKIATQPTNPQLPSHVS 233 (263)
T ss_pred ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH--------HHHHHhccCCCCCCCccCC
Confidence 1 22447788999999999889999999999999999999999985431110 0001111111123444567
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..+.+++.+||+.+|.+|||+.|++++
T Consensus 234 ~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 234 PDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 789999999999999999999999876
No 137
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=9.2e-32 Score=287.97 Aligned_cols=248 Identities=22% Similarity=0.287 Sum_probs=182.9
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCC-----ceeeeeecccC
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN-----HQLLVYELMKN 518 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lV~e~~~~ 518 (725)
..++.++.+.+..+ +..||||.+... .......+.+|++++++++||||+++++++.... ..++||||++
T Consensus 11 G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~- 87 (338)
T cd07859 11 GSYGVVCSAIDTHT--GEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME- 87 (338)
T ss_pred cCCeEEEEEEECCC--CCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-
Confidence 34555666655443 457889987642 2233457899999999999999999999986432 4799999996
Q ss_pred CChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 519 GTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 519 gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
++|.+++.....+++..+..++.|+++||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 88 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~-------~~~~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 88 SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANA-------DCKLKICDFGLARVAFNDT 157 (338)
T ss_pred CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECC-------CCcEEEccCcccccccccc
Confidence 68999998888899999999999999999999999 9999999999999987 8899999999998653322
Q ss_pred Ccc--ccccccCccccchhcccC--CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc-----cccC--c--------
Q 039817 599 TRT--STMIRGTMGYMAPEWLRN--APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT-----LANG--M-------- 659 (725)
Q Consensus 599 ~~~--~~~~~gt~~y~aPE~~~~--~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~-----~~~~--~-------- 659 (725)
... .....|+..|+|||.+.+ ..++.++||||||+++|||++|+.||......... .... .
T Consensus 158 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 237 (338)
T cd07859 158 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRN 237 (338)
T ss_pred CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 211 123458999999999875 67899999999999999999999998643211000 0000 0
Q ss_pred -chHHHHHHHHHcCCCC-----hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 660 -ILTDWVLYCVRTGNLG-----ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 660 -~~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...............+ ....+.+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 238 EKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000000000000 1234567899999999999999999999976
No 138
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.97 E-value=1.1e-31 Score=278.68 Aligned_cols=245 Identities=25% Similarity=0.377 Sum_probs=190.9
Q ss_pred ccHHHHHHHhccc---CCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVF---DGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~---~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..|+.++.+.... ......|++|.+.... .....++.+|+.++++++|+||+++++++......++||||+++++|
T Consensus 17 g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (277)
T cd05032 17 GSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDL 96 (277)
T ss_pred CCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCH
Confidence 4455566555432 2345689999986432 23456789999999999999999999999999999999999999999
Q ss_pred hhhhccC----------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCc
Q 039817 522 SAFLFRQ----------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLA 591 (725)
Q Consensus 522 ~~~l~~~----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla 591 (725)
.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||++
T Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~-------~~~~kl~dfg~~ 166 (277)
T cd05032 97 KSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAE-------DLTVKIGDFGMT 166 (277)
T ss_pred HHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcC-------CCCEEECCcccc
Confidence 9998643 2468889999999999999999998 9999999999999987 789999999999
Q ss_pred cccCcCCC-ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHH
Q 039817 592 KLLKKDQT-RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCV 669 (725)
Q Consensus 592 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (725)
+....... .......++..|+|||.+.+..++.++||||||+++||+++ |..|+...... ...+... ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--------~~~~~~~-~~ 237 (277)
T cd05032 167 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--------EVLKFVI-DG 237 (277)
T ss_pred hhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--------HHHHHHh-cC
Confidence 86543322 11222346778999999988889999999999999999998 77777532211 1111111 00
Q ss_pred HcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 670 RTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 670 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
.....+...+..+.+++.+||+.+|++|||+.++++.|+.
T Consensus 238 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 238 GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 1122344567889999999999999999999999999873
No 139
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-32 Score=287.66 Aligned_cols=241 Identities=24% Similarity=0.346 Sum_probs=193.5
Q ss_pred ccHHHHHHHhccc-CCcceEEEEEEcccccCc-cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 446 FSYQELREATNVF-DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 446 ~~~~~l~~a~~~~-~~~~~~vavk~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
.+|+.|++++... +|+-+.||||.+...... ....|++|+.+|.+|+|+|+++|||+..+ ....||+|+++.|||.+
T Consensus 121 GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLld 199 (1039)
T KOG0199|consen 121 GSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLD 199 (1039)
T ss_pred cceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHH
Confidence 4556666665433 467789999999865544 67889999999999999999999999988 77889999999999999
Q ss_pred hhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 524 FLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 524 ~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.|++. ..+.......++.|||.||.||..+ ++|||||..+|+||.. ...+||+||||.+.+......-
T Consensus 200 rLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllas-------prtVKI~DFGLmRaLg~ned~Y 269 (1039)
T KOG0199|consen 200 RLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLAS-------PRTVKICDFGLMRALGENEDMY 269 (1039)
T ss_pred HHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecc-------cceeeeecccceeccCCCCcce
Confidence 99873 4678889999999999999999999 9999999999999977 6789999999999876544332
Q ss_pred -cc-ccccCccccchhcccCCCCCCccceehhHHHHHHHHhC-CcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhH
Q 039817 602 -ST-MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFC-KRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATK 678 (725)
Q Consensus 602 -~~-~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (725)
+. ...-.+.|.|||.+....++.+||||+|||.||||+|+ ..||.... ...+.+.+. ....-.-+...
T Consensus 270 vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~--------g~qIL~~iD-~~erLpRPk~c 340 (1039)
T KOG0199|consen 270 VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR--------GIQILKNID-AGERLPRPKYC 340 (1039)
T ss_pred EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC--------HHHHHHhcc-ccccCCCCCCC
Confidence 22 23356789999999999999999999999999999984 45665432 111222222 11112334577
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 679 FERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
++.++++++.||..+|.+|||+..|.+.
T Consensus 341 sedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 341 SEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred hHHHHHHHHHhccCCccccccHHHHHHh
Confidence 8999999999999999999999999743
No 140
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=2.6e-31 Score=281.33 Aligned_cols=237 Identities=24% Similarity=0.249 Sum_probs=185.5
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhc-cCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGR-THHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..|++++++.+..+ +..||||.++... ....+.+..|..++.. ++||||+++++++.+++..++||||+++|+|
T Consensus 6 G~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L 83 (316)
T cd05619 6 GSFGKVFLAELKGT--NQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDL 83 (316)
T ss_pred CCCEEEEEEEECCC--CCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcH
Confidence 34555665554433 4578888886431 2344567788888876 4899999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++.+...+++.....++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....... .
T Consensus 84 ~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~-------~~~~kl~Dfg~~~~~~~~~~-~ 152 (316)
T cd05619 84 MFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDT-------DGHIKIADFGMCKENMLGDA-K 152 (316)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECC-------CCCEEEccCCcceECCCCCC-c
Confidence 99998877899999999999999999999999 9999999999999987 78899999999875322111 1
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
.....||..|+|||.+.+..++.++||||||+++|||++|+.|+...... ...+.+. ......+......
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~i~--~~~~~~~~~~~~~ 222 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--------ELFQSIR--MDNPCYPRWLTRE 222 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHH--hCCCCCCccCCHH
Confidence 22345899999999999999999999999999999999999998643211 0111111 1112234445677
Q ss_pred HHHHHHHccCCCCCCCCCHH-HHHH
Q 039817 682 ITMVGLWCICPQPTLRPSMK-QVLQ 705 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~-evl~ 705 (725)
+.+++.+||+.||++||++. ++.+
T Consensus 223 ~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 223 AKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred HHHHHHHHhccCHhhcCCChHHHHc
Confidence 89999999999999999997 6654
No 141
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=1.3e-31 Score=278.35 Aligned_cols=237 Identities=25% Similarity=0.321 Sum_probs=183.2
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
+|++++.+...-+ +..+|+|.+.... ....+.+..|++++++++||||+++++++..+...++||||+++++|.+
T Consensus 5 ~~g~Vy~~~~~~~--~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~ 82 (277)
T cd05607 5 GFGEVCAVQVKNT--GKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKY 82 (277)
T ss_pred CceEEEEEEEccC--CcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHH
Confidence 4455555544433 4578888875321 2234456779999999999999999999999999999999999999999
Q ss_pred hhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 524 FLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 524 ~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
++... ..+++..+..++.|++.||+|||+. +++||||||+||+++. ++.+||+|||++........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~-------~~~~~l~Dfg~~~~~~~~~~-- 150 (277)
T cd05607 83 HIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDD-------QGNCRLSDLGLAVELKDGKT-- 150 (277)
T ss_pred HHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcC-------CCCEEEeeceeeeecCCCce--
Confidence 88654 3578999999999999999999998 9999999999999987 78899999999886543321
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC---ChhH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL---GATK 678 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 678 (725)
.....|+..|+|||++.+..++.++||||||+++|||++|+.|+....... . ...+......... ....
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~ 222 (277)
T cd05607 151 ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-------A-KEELKRRTLEDEVKFEHQNF 222 (277)
T ss_pred eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-------h-HHHHHHHhhccccccccccC
Confidence 123458899999999998889999999999999999999999986432211 0 1111111111111 1235
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 039817 679 FERITMVGLWCICPQPTLRPSMKQVLQ 705 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs~~evl~ 705 (725)
.+.+.+++.+||+.||++||++.|+++
T Consensus 223 ~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 223 TEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred CHHHHHHHHHHhccCHhhCCCCccchh
Confidence 678899999999999999999966553
No 142
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.97 E-value=1.1e-31 Score=277.86 Aligned_cols=247 Identities=21% Similarity=0.316 Sum_probs=192.5
Q ss_pred cccHHHHHHHhcccC-CcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 445 VFSYQELREATNVFD-GQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~-~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
...++.+++|...-. +....|+||...... .+..+.|.+|+.++++++|+||+++++++.. +..++||||+++++|.
T Consensus 16 ~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~ 94 (270)
T cd05056 16 EGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELR 94 (270)
T ss_pred CccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHH
Confidence 345666666664332 445678999886543 3455689999999999999999999999875 5578999999999999
Q ss_pred hhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+++.+. ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++.........
T Consensus 95 ~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~-------~~~~~l~d~g~~~~~~~~~~~~ 164 (270)
T cd05056 95 SYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSS-------PDCVKLGDFGLSRYLEDESYYK 164 (270)
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEec-------CCCeEEccCceeeeccccccee
Confidence 999764 4589999999999999999999998 9999999999999987 7889999999998665443222
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFE 680 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (725)
.....++..|+|||.+....++.++||||||++++|+++ |..||....... ........ .....+...+.
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--------~~~~~~~~-~~~~~~~~~~~ 235 (270)
T cd05056 165 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--------VIGRIENG-ERLPMPPNCPP 235 (270)
T ss_pred cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHHcC-CcCCCCCCCCH
Confidence 222334567999999988889999999999999999996 888875432111 11111100 01123345567
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 681 RITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
.+.+++.+|+..+|.+|||+.++++.|+++.
T Consensus 236 ~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 236 TLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 8999999999999999999999999998764
No 143
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.7e-32 Score=272.34 Aligned_cols=244 Identities=25% Similarity=0.247 Sum_probs=183.1
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCC-----ceeeeeecccCC
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN-----HQLLVYELMKNG 519 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lV~e~~~~g 519 (725)
..+|+.|++|.-... +..||||+.-.. .+.--+|+++|++++|||||+|+-++.... ...+|||||+.
T Consensus 34 ~GsFg~Vyq~~~~e~--~~~vAIKKv~~d----~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~- 106 (364)
T KOG0658|consen 34 SGSFGVVYQAKLRET--EEEVAIKKVLQD----KRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE- 106 (364)
T ss_pred ecccceEEEEEEcCC--CceeEEEEecCC----CCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-
Confidence 356666666665554 568999987432 222347999999999999999999987432 34589999987
Q ss_pred Chhhhhcc----CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccC
Q 039817 520 TLSAFLFR----QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLK 595 (725)
Q Consensus 520 sL~~~l~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~ 595 (725)
+|.+++.. +..++...+.-+..|+.+||.|||+. +|+||||||+|+|+|.+ .+.+||+|||.|+.+.
T Consensus 107 tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~------tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 107 TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPD------TGVLKICDFGSAKVLV 177 (364)
T ss_pred HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCC------CCeEEeccCCcceeec
Confidence 88888864 46678788888999999999999998 99999999999999985 7999999999999887
Q ss_pred cCCCccccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc----cCcchHHHHHH---
Q 039817 596 KDQTRTSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA----NGMILTDWVLY--- 667 (725)
Q Consensus 596 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~----~~~~~~~~~~~--- 667 (725)
...... ....+..|+|||.+.+. .|+.+.||||.|||+.||+.|+..|.+.....+-.. -+....+.+..
T Consensus 178 ~~epni--SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~ 255 (364)
T KOG0658|consen 178 KGEPNI--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNP 255 (364)
T ss_pred cCCCce--eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCc
Confidence 665543 23468899999998764 799999999999999999999999976543221000 00000000000
Q ss_pred --------HHHcCC----CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 668 --------CVRTGN----LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 668 --------~~~~~~----~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+.... ......++..+|+.++++.+|.+|.++.|++.+
T Consensus 256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred ccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 000000 222456788999999999999999999999865
No 144
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.1e-31 Score=292.66 Aligned_cols=246 Identities=22% Similarity=0.236 Sum_probs=188.0
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
..+++.++.+...-......|++|.+... +.+.+|++++++++|+||+++++++......++|||++. ++|.++
T Consensus 102 ~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~ 175 (392)
T PHA03207 102 PGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTY 175 (392)
T ss_pred CCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHH
Confidence 34556666665544455678899987542 345689999999999999999999999999999999996 588899
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc-cc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT-ST 603 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~-~~ 603 (725)
+.....+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++......... ..
T Consensus 176 l~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~-------~~~~~l~DfG~a~~~~~~~~~~~~~ 245 (392)
T PHA03207 176 VDRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDE-------PENAVLGDFGAACKLDAHPDTPQCY 245 (392)
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcC-------CCCEEEccCccccccCccccccccc
Confidence 87778899999999999999999999999 9999999999999987 7899999999998654432222 22
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc------------------cccCcchHHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT------------------LANGMILTDWV 665 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~------------------~~~~~~~~~~~ 665 (725)
...||..|+|||++....++.++||||||+++|||++|+.|+......... ......+....
T Consensus 246 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~ 325 (392)
T PHA03207 246 GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHF 325 (392)
T ss_pred ccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHH
Confidence 356899999999999999999999999999999999999998654322100 00000001111
Q ss_pred HHHHHc--CC--CC-----hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 666 LYCVRT--GN--LG-----ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 666 ~~~~~~--~~--~~-----~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...... .. .+ ......+.+++.+|++.||++|||+.|++.+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 326 KQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 110000 00 00 0124567889999999999999999999987
No 145
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.97 E-value=2e-31 Score=274.29 Aligned_cols=240 Identities=26% Similarity=0.336 Sum_probs=186.5
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.+++.++.+++... ..+++|.+... ....+.|.+|++++++++|+|++++++++. .+..++||||+++++|.+++
T Consensus 17 g~~~~v~~~~~~~~---~~~~lK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~ 91 (260)
T cd05069 17 GCFGEVWMGTWNGT---TKVAIKTLKPG-TMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFL 91 (260)
T ss_pred cCCCeEEEEEEcCC---ceEEEEEcccC-CccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHH
Confidence 44556666654322 35889987643 234567999999999999999999999875 45688999999999999999
Q ss_pred ccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 526 FRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 526 ~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
.+. ..+++..+..++.|++.||.|||+. +++|+||||+||++++ ++.+||+|||++............
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~-------~~~~~l~dfg~~~~~~~~~~~~~~ 161 (260)
T cd05069 92 KEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGD-------NLVCKIADFGLARLIEDNEYTARQ 161 (260)
T ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcC-------CCeEEECCCccceEccCCcccccC
Confidence 754 3478999999999999999999998 9999999999999987 788999999999866433222222
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERI 682 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 682 (725)
...++..|+|||...+..++.++||||||+++|||++ |+.|+...... ......... .....+...+..+
T Consensus 162 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~ 232 (260)
T cd05069 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--------EVLEQVERG-YRMPCPQGCPESL 232 (260)
T ss_pred CCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcC-CCCCCCcccCHHH
Confidence 2335678999999998899999999999999999999 77777532110 111111110 0112234556789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
.+++.+|++.+|++||++++|++.|+.
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 233 HELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 999999999999999999999999975
No 146
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=2.2e-31 Score=281.98 Aligned_cols=245 Identities=28% Similarity=0.414 Sum_probs=190.5
Q ss_pred cccHHHHHHHhcc-----cCCcceEEEEEEccccc-CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeeccc
Q 039817 445 VFSYQELREATNV-----FDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMK 517 (725)
Q Consensus 445 ~~~~~~l~~a~~~-----~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~ 517 (725)
...++.++.+... .......+++|.+.... ......+.+|+++++++ +|+||+++++++..++..++||||++
T Consensus 22 ~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 101 (314)
T cd05099 22 EGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAA 101 (314)
T ss_pred CCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCC
Confidence 3456666666542 22345678999886432 33456789999999999 69999999999999999999999999
Q ss_pred CCChhhhhccC----------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCC
Q 039817 518 NGTLSAFLFRQ----------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNY 581 (725)
Q Consensus 518 ~gsL~~~l~~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~ 581 (725)
+|+|.+++... ..+++..+.+++.|++.||.|||+. +++||||||+||+++. ++
T Consensus 102 ~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~~-------~~ 171 (314)
T cd05099 102 KGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVTE-------DN 171 (314)
T ss_pred CCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEcC-------CC
Confidence 99999999653 2478899999999999999999998 9999999999999987 78
Q ss_pred ceEEeeccCccccCcCCCcc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCc
Q 039817 582 ITKIADFGLAKLLKKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGM 659 (725)
Q Consensus 582 ~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~ 659 (725)
.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|+.....
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--------- 242 (314)
T cd05099 172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--------- 242 (314)
T ss_pred cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH---------
Confidence 89999999998654322211 112224567999999998899999999999999999999 7777643211
Q ss_pred chHHHHHHHHHcC---CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 660 ILTDWVLYCVRTG---NLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 660 ~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
.+ +....... ..+...+..+.+++.+|++.+|++|||+.|+++.|+++.
T Consensus 243 --~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 243 --EE-LFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred --HH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 11 11111111 233445678899999999999999999999999998865
No 147
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.97 E-value=1.1e-31 Score=285.29 Aligned_cols=232 Identities=25% Similarity=0.248 Sum_probs=182.4
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHH-HHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQ-VIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.++++++++.+..+ +..||+|.+.... ....+.+..|.. +++.++||||+++++.+..++..++||||+++|+|
T Consensus 6 G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L 83 (323)
T cd05575 6 GSFGKVLLAKHKAD--GKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGEL 83 (323)
T ss_pred CCCeEEEEEEECCC--CCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCH
Confidence 34556666665444 4578888875421 223345556655 45789999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++.+...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....... .
T Consensus 84 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~-------~~~~kl~Dfg~~~~~~~~~~-~ 152 (323)
T cd05575 84 FFHLQRERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDS-------QGHVVLTDFGLCKEGIEHSK-T 152 (323)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECC-------CCcEEEeccCCCcccccCCC-c
Confidence 99998888899999999999999999999999 9999999999999987 78999999999875422221 2
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCCCChhHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGNLGATKFE 680 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 680 (725)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.||..... .+....... ....+.....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----------~~~~~~i~~~~~~~~~~~~~ 221 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----------AEMYDNILNKPLRLKPNISV 221 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----------HHHHHHHHcCCCCCCCCCCH
Confidence 2334589999999999999999999999999999999999999864321 111111111 1223345577
Q ss_pred HHHHHHHHccCCCCCCCCCHH
Q 039817 681 RITMVGLWCICPQPTLRPSMK 701 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~ 701 (725)
.+.+++.+|++.||++||++.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 222 SARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHHhhcCHHhCCCCC
Confidence 899999999999999999884
No 148
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=7.1e-32 Score=287.04 Aligned_cols=232 Identities=26% Similarity=0.257 Sum_probs=182.3
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHH-HhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..|++++.|.+..++ ..+|+|.+... .......+..|... ++.++||||+++++.+..++..++||||+++|+|
T Consensus 6 G~~g~V~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 83 (325)
T cd05604 6 GSFGKVLLAKRKLDG--KCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGEL 83 (325)
T ss_pred CCCeEEEEEEECCCC--CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCH
Confidence 345666666655444 57788887543 22334556666654 6778999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
..++.+...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....... .
T Consensus 84 ~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~-------~~~~kL~DfG~~~~~~~~~~-~ 152 (325)
T cd05604 84 FFHLQRERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDS-------QGHVVLTDFGLCKEGIAQSD-T 152 (325)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECC-------CCCEEEeecCCcccCCCCCC-C
Confidence 99998888899999999999999999999999 9999999999999987 78999999999875322211 2
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCCCChhHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGNLGATKFE 680 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 680 (725)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.||...... +....... ..........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 221 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-----------EMYDNILHKPLVLRPGASL 221 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-----------HHHHHHHcCCccCCCCCCH
Confidence 23356899999999999999999999999999999999999998643211 11111111 1122334567
Q ss_pred HHHHHHHHccCCCCCCCCCHH
Q 039817 681 RITMVGLWCICPQPTLRPSMK 701 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~ 701 (725)
.+.+++.+|++.+|.+||++.
T Consensus 222 ~~~~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 222 TAWSILEELLEKDRQRRLGAK 242 (325)
T ss_pred HHHHHHHHHhccCHHhcCCCC
Confidence 788999999999999999875
No 149
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.97 E-value=1.5e-31 Score=290.90 Aligned_cols=243 Identities=20% Similarity=0.212 Sum_probs=187.2
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
...+|++|++|.+..+ +..+|||.+.... ....+.+.+|++++++++|+||+++++++.+++..++||||+++|+
T Consensus 10 G~G~~g~Vy~~~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~ 87 (381)
T cd05626 10 GIGAFGEVCLACKVDT--HALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGD 87 (381)
T ss_pred eecCCEEEEEEEECCC--CCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCc
Confidence 3456777777766544 4578888886432 2345678999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC-
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT- 599 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~- 599 (725)
|.+++.+...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.+.....
T Consensus 88 L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~-------~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 88 MMSLLIRMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDL-------DGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECC-------CCCEEEeeCcCCccccccccc
Confidence 999998888899999999999999999999999 9999999999999987 78999999999764311000
Q ss_pred ---------------------------------------------ccccccccCccccchhcccCCCCCCccceehhHHH
Q 039817 600 ---------------------------------------------RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVM 634 (725)
Q Consensus 600 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~v 634 (725)
.......||..|+|||.+.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 00112458999999999998899999999999999
Q ss_pred HHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCC--hhHHHHHHHHHHH--ccCCCCCCCCCHHHHHHH
Q 039817 635 LLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG--ATKFERITMVGLW--CICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 635 l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~--cl~~dp~~RPs~~evl~~ 706 (725)
+|||++|+.||........ .............+ ......+.+++.+ |+..++..||+++|++++
T Consensus 238 l~elltG~~Pf~~~~~~~~--------~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTET--------QLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHHhCCCCCcCCCHHHH--------HHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9999999999975432110 00000000011111 1345677788877 556667779999999987
No 150
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.97 E-value=2.9e-31 Score=287.00 Aligned_cols=241 Identities=18% Similarity=0.180 Sum_probs=186.7
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
...|+.++.+.+..+ +..+|+|.+... .....+.+.+|+++++.++||||+++++++.+++..++||||+++|+|
T Consensus 53 ~G~~g~Vy~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L 130 (370)
T cd05596 53 RGAFGEVQLVRHKSS--KQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDL 130 (370)
T ss_pred eCCCEEEEEEEECCC--CCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcH
Confidence 345666666655443 457889988542 223345678999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++... .++......++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++..........
T Consensus 131 ~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~-------~~~~kL~DfG~~~~~~~~~~~~ 199 (370)
T cd05596 131 VNLMSNY-DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDK-------SGHLKLADFGTCMKMDANGMVR 199 (370)
T ss_pred HHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcC-------CCCEEEEeccceeeccCCCccc
Confidence 9988554 578888999999999999999999 9999999999999987 8899999999998664433222
Q ss_pred ccccccCccccchhcccCC----CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCCh-
Q 039817 602 STMIRGTMGYMAPEWLRNA----PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA- 676 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~----~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 676 (725)
.....||+.|+|||.+.+. .++.++||||||+++|||++|+.||....... ....+.........+.
T Consensus 200 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~~~~ 271 (370)
T cd05596 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG--------TYSKIMDHKNSLTFPDD 271 (370)
T ss_pred CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH--------HHHHHHcCCCcCCCCCc
Confidence 2335689999999998653 47899999999999999999999987532110 0011110000111222
Q ss_pred -hHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 039817 677 -TKFERITMVGLWCICPQPTL--RPSMKQVLQM 706 (725)
Q Consensus 677 -~~~~~l~~l~~~cl~~dp~~--RPs~~evl~~ 706 (725)
..+..+.+++.+||+.+|++ ||+++|++++
T Consensus 272 ~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 272 IEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 35678899999999999988 9999999876
No 151
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.5e-31 Score=276.30 Aligned_cols=245 Identities=21% Similarity=0.245 Sum_probs=189.0
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
...++.++++++..+ +..|++|.+........+.+.+|+.++++++|+||+++++.+..++..++||||+++++|.++
T Consensus 19 ~g~~g~vy~~~~~~~--~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~ 96 (267)
T cd06646 19 SGTYGDVYKARNLHT--GELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDI 96 (267)
T ss_pred cCCCeEEEEEEECCC--CeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHH
Confidence 345566666665443 457888888655455566788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
+.....+++..+..++.|++.||.|||+. +|+|+||+|+||+++. ++.+||+|||++......... ...
T Consensus 97 ~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~-------~~~~~l~dfg~~~~~~~~~~~-~~~ 165 (267)
T cd06646 97 YHVTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTD-------NGDVKLADFGVAAKITATIAK-RKS 165 (267)
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECC-------CCCEEECcCccceeecccccc-cCc
Confidence 98778889999999999999999999998 9999999999999987 778999999999865432211 122
Q ss_pred cccCccccchhccc---CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 605 IRGTMGYMAPEWLR---NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 605 ~~gt~~y~aPE~~~---~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
..++..|+|||.+. ...++.++||||||++++||++|+.|+........... ...... . .............
T Consensus 166 ~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~--~~~~~~-~--~~~~~~~~~~~~~ 240 (267)
T cd06646 166 FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL--MSKSNF-Q--PPKLKDKTKWSST 240 (267)
T ss_pred cccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee--eecCCC-C--CCCCccccccCHH
Confidence 45788999999874 44578899999999999999999998853321110000 000000 0 0000011234568
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
+.+++.+||+.+|++|||+++++++|
T Consensus 241 ~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 241 FHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 89999999999999999999999875
No 152
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=2.4e-31 Score=280.28 Aligned_cols=248 Identities=27% Similarity=0.367 Sum_probs=191.9
Q ss_pred ccHHHHHHHhcc-----cCCcceEEEEEEccccc-CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccC
Q 039817 446 FSYQELREATNV-----FDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKN 518 (725)
Q Consensus 446 ~~~~~l~~a~~~-----~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~ 518 (725)
..|+.++.|... ...+...|++|.+.... ....+.+.+|+.+++++ +|+||+++++++......++||||+++
T Consensus 26 G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (304)
T cd05101 26 GCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 105 (304)
T ss_pred cCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCC
Confidence 345555555432 12344678999886432 34456799999999999 899999999999999999999999999
Q ss_pred CChhhhhccC----------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCc
Q 039817 519 GTLSAFLFRQ----------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYI 582 (725)
Q Consensus 519 gsL~~~l~~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~ 582 (725)
++|.+++.+. ..+++..+..++.|+++||.|||+. +++||||||+||+++. ++.
T Consensus 106 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili~~-------~~~ 175 (304)
T cd05101 106 GNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLVTE-------NNV 175 (304)
T ss_pred CcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEEcC-------CCc
Confidence 9999998653 2467889999999999999999999 9999999999999987 788
Q ss_pred eEEeeccCccccCcCCCcc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcc
Q 039817 583 TKIADFGLAKLLKKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMI 660 (725)
Q Consensus 583 ~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~ 660 (725)
+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|+....
T Consensus 176 ~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~----------- 244 (304)
T cd05101 176 MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP----------- 244 (304)
T ss_pred EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----------
Confidence 9999999998764432221 122335678999999998889999999999999999998 666654221
Q ss_pred hHHHHHHHHHc--CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCC
Q 039817 661 LTDWVLYCVRT--GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVG 714 (725)
Q Consensus 661 ~~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 714 (725)
..+........ ...+...+..+.+++.+||+.+|++|||+.||++.|+++..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 245 VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 11111111111 1223345678999999999999999999999999999876553
No 153
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=2.9e-31 Score=278.60 Aligned_cols=236 Identities=27% Similarity=0.374 Sum_probs=181.2
Q ss_pred CcceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCC---------
Q 039817 460 GQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQE--------- 529 (725)
Q Consensus 460 ~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------- 529 (725)
+....+|+|.+... .......|.+|++++++++|+||+++++++..++..++||||+++++|.+++....
T Consensus 44 ~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (296)
T cd05095 44 NQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKAD 123 (296)
T ss_pred CceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCccccccccc
Confidence 44567999998743 33345689999999999999999999999999999999999999999999986532
Q ss_pred --CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc-ccccc
Q 039817 530 --IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT-STMIR 606 (725)
Q Consensus 530 --~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~ 606 (725)
.+++..+..++.|++.||+|||+. +++|+||||+||+++. ++.+||+|||+++......... .....
T Consensus 124 ~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Nili~~-------~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 193 (296)
T cd05095 124 VVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNCLVGK-------NYTIKIADFGMSRNLYSGDYYRIQGRAV 193 (296)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheEEEcC-------CCCEEeccCcccccccCCcceeccCcCc
Confidence 367789999999999999999999 9999999999999987 7889999999998654332211 11223
Q ss_pred cCccccchhcccCCCCCCccceehhHHHHHHHHh--CCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCChhHHHHH
Q 039817 607 GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF--CKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGATKFERI 682 (725)
Q Consensus 607 gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 682 (725)
++..|+|||....+.++.++||||||+++|||++ |..|+........ . .....+....... ...+...+..+
T Consensus 194 ~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (296)
T cd05095 194 LPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQV-I---ENTGEFFRDQGRQVYLPKPALCPDSL 269 (296)
T ss_pred CccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHH-H---HHHHHHHhhccccccCCCCCCCCHHH
Confidence 4678999999888889999999999999999998 5566643221110 0 0000111000000 11223455789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
.+++.+||+.||++||++.+|++.|+.
T Consensus 270 ~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 270 YKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 999999999999999999999999863
No 154
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.97 E-value=2e-31 Score=278.64 Aligned_cols=242 Identities=27% Similarity=0.374 Sum_probs=188.1
Q ss_pred ccHHHHHHHhccc---CCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVF---DGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~---~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..|+.++++.... ......||+|.+.... .+..+.|.+|+.++++++|+||+++++++..++..++||||+++++|
T Consensus 16 g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 95 (288)
T cd05050 16 GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDL 95 (288)
T ss_pred cccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCH
Confidence 3456666665432 2245688999886432 23456799999999999999999999999999999999999999999
Q ss_pred hhhhccC----------------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCC
Q 039817 522 SAFLFRQ----------------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDN 579 (725)
Q Consensus 522 ~~~l~~~----------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~ 579 (725)
.+++... ..+++..++.++.|++.||.|||+. +++||||||+||+++.
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~nil~~~------- 165 (288)
T cd05050 96 NEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGE------- 165 (288)
T ss_pred HHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhheEecC-------
Confidence 9998642 2367888999999999999999998 9999999999999977
Q ss_pred CCceEEeeccCccccCcCCCc-cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCcccccc
Q 039817 580 NYITKIADFGLAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLAN 657 (725)
Q Consensus 580 ~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~ 657 (725)
++.+||+|||++......... .......+..|+|||.+.+..++.++||||||+++|||++ |..|+.....
T Consensus 166 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~------- 238 (288)
T cd05050 166 NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH------- 238 (288)
T ss_pred CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-------
Confidence 788999999998754332211 1112234567999999998899999999999999999997 6666642211
Q ss_pred CcchHHHHHHHHHcCC---CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 658 GMILTDWVLYCVRTGN---LGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 658 ~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
.+.. .....+. .+...+..+.+++.+|++.+|++|||+.|+++.|++
T Consensus 239 ----~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 ----EEVI-YYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ----HHHH-HHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1111 1122222 233456789999999999999999999999999974
No 155
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.97 E-value=3.9e-32 Score=289.80 Aligned_cols=240 Identities=21% Similarity=0.216 Sum_probs=188.1
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..|++++++.+..+ +..+|+|.+.... ....+.+.+|+.+++.++|+||+++++++...+..++||||+++|+|.
T Consensus 12 G~~g~Vy~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (330)
T cd05601 12 GHFGEVQVVREKAT--GDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLL 89 (330)
T ss_pred ccCEEEEEEEECCC--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHH
Confidence 34556666655544 3578888886432 234567889999999999999999999999999999999999999999
Q ss_pred hhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+++.+. ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++..........
T Consensus 90 ~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~-------~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 90 SLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDR-------TGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECC-------CCCEEeccCCCCeECCCCCcee
Confidence 999876 6789999999999999999999999 9999999999999987 8899999999998765443333
Q ss_pred ccccccCccccchhccc------CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCC
Q 039817 602 STMIRGTMGYMAPEWLR------NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG 675 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~------~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (725)
.....|++.|+|||.+. ...++.++||||||+++|||++|+.||....... ....+.........+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--------~~~~i~~~~~~~~~~ 231 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK--------TYNNIMNFQRFLKFP 231 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH--------HHHHHHcCCCccCCC
Confidence 33346899999999986 4567899999999999999999999986432111 000010000001111
Q ss_pred --hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 676 --ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 676 --~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
......+.+++..|++ +|++||++++++++
T Consensus 232 ~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 232 EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 1346778899999998 99999999999975
No 156
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.97 E-value=4.9e-31 Score=280.51 Aligned_cols=235 Identities=24% Similarity=0.270 Sum_probs=182.9
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHH---hccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVI---GRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l---~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
.+++++.+.+.. .+..||||.+.... ....+.+.+|++++ ++++||||+++++++..++..++||||+++++
T Consensus 11 ~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 88 (324)
T cd05589 11 HFGKVLLAEYKK--TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGD 88 (324)
T ss_pred CCEEEEEEEECC--CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCc
Confidence 444555554433 34578999886432 23345677776655 56789999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|..++.+ ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 89 L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~-------~~~~kL~Dfg~~~~~~~~~~- 156 (324)
T cd05589 89 LMMHIHT-DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDT-------EGFVKIADFGLCKEGMGFGD- 156 (324)
T ss_pred HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECC-------CCcEEeCcccCCccCCCCCC-
Confidence 9988854 5689999999999999999999999 9999999999999987 78999999999875332221
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH-HcCCCChhHH
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV-RTGNLGATKF 679 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 679 (725)
......|+..|+|||.+.+..++.++||||||+++|||++|+.|+...... +...... .....+....
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----------~~~~~i~~~~~~~p~~~~ 225 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----------EVFDSIVNDEVRYPRFLS 225 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHHhCCCCCCCCCC
Confidence 122355899999999999999999999999999999999999998643211 1111111 1223444567
Q ss_pred HHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
..+.+++.+||+.||.+|| ++.+++++
T Consensus 226 ~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 226 REAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 7889999999999999999 57777765
No 157
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.97 E-value=3.9e-31 Score=271.34 Aligned_cols=236 Identities=28% Similarity=0.388 Sum_probs=188.9
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
.++.++++... +..|++|.+..... ..+++.+|+.++++++|+||+++++++...+..++||||+++++|.+++.
T Consensus 18 ~~g~v~~~~~~----~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~ 92 (256)
T cd05039 18 EFGDVMLGDYR----GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLR 92 (256)
T ss_pred CCceEEEEEec----CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHH
Confidence 34455544432 46789999875533 56789999999999999999999999999999999999999999999997
Q ss_pred cCC--CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 527 RQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 527 ~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
... .+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||.++....... .
T Consensus 93 ~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~-------~~~~~l~d~g~~~~~~~~~~----~ 158 (256)
T cd05039 93 SRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSE-------DLVAKVSDFGLAKEASQGQD----S 158 (256)
T ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeC-------CCCEEEcccccccccccccc----c
Confidence 664 789999999999999999999999 9999999999999987 78899999999987633221 2
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHH
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERIT 683 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 683 (725)
...+..|+|||++....++.++||||||++++|+++ |..|+...... .+...+.... ....+...++.+.
T Consensus 159 ~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~ 229 (256)
T cd05039 159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--------DVVPHVEKGY-RMEAPEGCPPEVY 229 (256)
T ss_pred CCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHhcCC-CCCCccCCCHHHH
Confidence 234567999999988889999999999999999997 88877532111 0111111100 1123344568899
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 684 MVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 684 ~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
+++.+|++.+|++||++++++++|+.+
T Consensus 230 ~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 230 KVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 999999999999999999999999763
No 158
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.97 E-value=6.7e-31 Score=270.33 Aligned_cols=240 Identities=27% Similarity=0.345 Sum_probs=186.5
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.+++.++.+... .+..+++|.+.... ...+.|.+|+.++++++|+|++++++++. ....++||||+++++|.+++
T Consensus 17 g~~~~v~~~~~~---~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~ 91 (260)
T cd05070 17 GQFGEVWMGTWN---GNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFL 91 (260)
T ss_pred ccCceEEEEEec---CCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHH
Confidence 445555555432 23458899886533 34567999999999999999999999885 45688999999999999999
Q ss_pred ccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 526 FRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 526 ~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
... ..+++..+..++.|++.||.|||+. +++|+||||+||++++ ++.+||+|||++............
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~-------~~~~~l~dfg~~~~~~~~~~~~~~ 161 (260)
T cd05070 92 KDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGD-------GLVCKIADFGLARLIEDNEYTARQ 161 (260)
T ss_pred HhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeC-------CceEEeCCceeeeeccCccccccc
Confidence 754 4589999999999999999999999 9999999999999987 788999999999876443222222
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERI 682 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 682 (725)
...++..|+|||.+.+..++.++||||||++++||++ |..|+..... ....+..... .....+...+..+
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~ 232 (260)
T cd05070 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--------REVLEQVERG-YRMPCPQDCPISL 232 (260)
T ss_pred CCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcC-CCCCCCCcCCHHH
Confidence 2235668999999988889999999999999999999 7777753211 1111111110 0112344556789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
.+++.+|++.+|++|||+.++.+.|++
T Consensus 233 ~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 233 HELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 999999999999999999999999975
No 159
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=4.2e-31 Score=280.27 Aligned_cols=255 Identities=20% Similarity=0.248 Sum_probs=184.7
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEc--CCceeeeeecccCCC
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE--QNHQLLVYELMKNGT 520 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~e~~~~gs 520 (725)
+...+|++|++|.+........+|+|.++.. .....+.+|++++++++||||+++++++.. +...++||||+++ +
T Consensus 9 lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~ 85 (317)
T cd07868 9 VGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-D 85 (317)
T ss_pred cccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-C
Confidence 4556778888887655556678999998643 234567899999999999999999999864 4567899999875 7
Q ss_pred hhhhhccC---------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCc
Q 039817 521 LSAFLFRQ---------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLA 591 (725)
Q Consensus 521 L~~~l~~~---------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla 591 (725)
|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++... +..+.+||+|||++
T Consensus 86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~---~~~~~~kl~DfG~a 159 (317)
T cd07868 86 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEG---PERGRVKIADMGFA 159 (317)
T ss_pred HHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCC---CCcCcEEEeecCce
Confidence 87776421 2478899999999999999999999 999999999999995321 12678999999999
Q ss_pred cccCcCCCc--cccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCc-c-h-----
Q 039817 592 KLLKKDQTR--TSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGM-I-L----- 661 (725)
Q Consensus 592 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~-~-~----- 661 (725)
+........ ......+|+.|+|||++.+ ..++.++||||+|++++||++|+.||.....+........ . +
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 239 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence 876443221 1223458999999999876 4589999999999999999999999865433211100000 0 0
Q ss_pred -------HHHH-----------HHHHHcCCC------------ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 662 -------TDWV-----------LYCVRTGNL------------GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 662 -------~~~~-----------~~~~~~~~~------------~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..|- ......... .......+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 240 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred hcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 000000000 00112457889999999999999999999875
No 160
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=8.8e-32 Score=278.37 Aligned_cols=245 Identities=26% Similarity=0.345 Sum_probs=180.2
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
..|++++.++..-......+++|.+.... ......|.+|+++++.++|+||+++++.+......++||||+++|+|.++
T Consensus 6 G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~ 85 (269)
T cd05042 6 GWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNY 85 (269)
T ss_pred cCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHH
Confidence 45666666543222344578888876432 23346789999999999999999999999999999999999999999999
Q ss_pred hccCC-----CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 525 LFRQE-----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 525 l~~~~-----~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
+.... ..++.....++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~-------~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 86 LRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTA-------DLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred HHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecC-------CCcEEEeccccccccccchh
Confidence 96642 246788899999999999999999 9999999999999987 78999999999875433221
Q ss_pred cc-ccccccCccccchhccc-------CCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHH--
Q 039817 600 RT-STMIRGTMGYMAPEWLR-------NAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYC-- 668 (725)
Q Consensus 600 ~~-~~~~~gt~~y~aPE~~~-------~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 668 (725)
.. .....++..|+|||++. ...++.++||||||+++|||++ |..|+...... ..+.......
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-------~~~~~~~~~~~~ 228 (269)
T cd05042 156 YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE-------QVLKQVVREQDI 228 (269)
T ss_pred eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH-------HHHHHHhhccCc
Confidence 11 12233567799999874 3456889999999999999999 56666432110 0011111100
Q ss_pred -HHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 669 -VRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 669 -~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
......+....+.+.+++..|+ .||++|||+++|++.|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 229 KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 0011223345667788888898 59999999999999874
No 161
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.97 E-value=2.5e-31 Score=274.85 Aligned_cols=234 Identities=28% Similarity=0.447 Sum_probs=181.6
Q ss_pred ceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC-------CCCCH
Q 039817 462 EVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-------EIPTW 533 (725)
Q Consensus 462 ~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-------~~l~~ 533 (725)
...+++|.+.... ......|.+|++++++++||||+++++++...+..++||||+++++|.+++.+. ..+++
T Consensus 26 ~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 105 (269)
T cd05044 26 PIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTL 105 (269)
T ss_pred ceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccH
Confidence 4578888875432 244668999999999999999999999999999999999999999999999642 34788
Q ss_pred HHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc-ccccccCcccc
Q 039817 534 DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT-STMIRGTMGYM 612 (725)
Q Consensus 534 ~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~ 612 (725)
..+..++.|++.||.|||+. +++|+||||+||+++.+.. +....+|++|||+++......... .....++..|+
T Consensus 106 ~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~--~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~ 180 (269)
T cd05044 106 KELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGY--DADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWM 180 (269)
T ss_pred HHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCC--CCCcceEECCcccccccccccccccCcccCCCcccc
Confidence 99999999999999999998 9999999999999987310 113389999999997654322211 11223567899
Q ss_pred chhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccC
Q 039817 613 APEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCIC 691 (725)
Q Consensus 613 aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 691 (725)
|||.+.+..++.++||||||+++|||++ |+.|+...... .....+.. ......+...++.+.+++.+||+
T Consensus 181 aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~ 251 (269)
T cd05044 181 APESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--------EVLQHVTA-GGRLQKPENCPDKIYQLMTNCWA 251 (269)
T ss_pred CHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--------HHHHHHhc-CCccCCcccchHHHHHHHHHHcC
Confidence 9999999999999999999999999998 88887532110 01111110 00112334556789999999999
Q ss_pred CCCCCCCCHHHHHHHhcC
Q 039817 692 PQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 692 ~dp~~RPs~~evl~~L~~ 709 (725)
.+|.+||++++|+++|++
T Consensus 252 ~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 252 QDPSERPTFDRIQEILQN 269 (269)
T ss_pred CCcccCCCHHHHHHHHhC
Confidence 999999999999999863
No 162
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.97 E-value=4.2e-31 Score=271.88 Aligned_cols=241 Identities=25% Similarity=0.349 Sum_probs=188.6
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
...|+.++.|... ++..+++|.+.... ...+.|.+|+.++++++|+||+++++++. .+..++||||+++++|.++
T Consensus 16 ~G~~g~v~~~~~~---~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~ 90 (260)
T cd05067 16 AGQFGEVWMGYYN---GHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDF 90 (260)
T ss_pred cCccceEEeeecC---CCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHH
Confidence 3455666666532 34579999887543 34568999999999999999999999874 5678999999999999999
Q ss_pred hccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 525 LFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 525 l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+... ..+++.++..++.|++.||+|||+. +++|+||||+||+++. ++.++|+|||++...........
T Consensus 91 ~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~-------~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05067 91 LKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSE-------TLCCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcC-------CCCEEEccCcceeecCCCCcccc
Confidence 8654 4678999999999999999999998 9999999999999987 78899999999987653322222
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
....++..|+|||.+....++.++||||||++++|+++ |+.|+...... .......... ....+...+..
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~ 231 (260)
T cd05067 161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--------EVIQNLERGY-RMPRPDNCPEE 231 (260)
T ss_pred cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHHHcCC-CCCCCCCCCHH
Confidence 22345678999999988889999999999999999999 88888643211 1111111100 11223345578
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
+.+++.+|++.+|++||+++++++.|+.
T Consensus 232 ~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 232 LYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 9999999999999999999999999975
No 163
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.97 E-value=5.5e-31 Score=273.32 Aligned_cols=245 Identities=23% Similarity=0.290 Sum_probs=189.5
Q ss_pred cHHHHHHHhcccC---CcceEEEEEEcccccCc-cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 447 SYQELREATNVFD---GQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~---~~~~~vavk~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
+|++++.|+.... +....|++|.+...... ..+.+.+|++++++++|+||+++++++.+.+..++||||+++++|.
T Consensus 17 ~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 96 (275)
T cd05046 17 EFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLK 96 (275)
T ss_pred ceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHH
Confidence 4555555554322 34457899988654333 4578999999999999999999999999999999999999999999
Q ss_pred hhhccCC---------CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 523 AFLFRQE---------IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 523 ~~l~~~~---------~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
+++.... .+++..+..++.|++.||+|||+. +|+|+||||+||+++. ++.+|++|||+++.
T Consensus 97 ~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~-------~~~~~l~~~~~~~~ 166 (275)
T cd05046 97 QFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSS-------QREVKVSLLSLSKD 166 (275)
T ss_pred HHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeC-------CCcEEEcccccccc
Confidence 9997655 689999999999999999999999 9999999999999987 78899999999875
Q ss_pred cCcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcC
Q 039817 594 LKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTG 672 (725)
Q Consensus 594 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (725)
.............++..|+|||.+.+...+.++||||||++++||++ |..|+..... ..............
T Consensus 167 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--------~~~~~~~~~~~~~~ 238 (275)
T cd05046 167 VYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--------EEVLNRLQAGKLEL 238 (275)
T ss_pred cCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--------HHHHHHHHcCCcCC
Confidence 43322222223346678999999988888999999999999999998 5666642211 00111111000011
Q ss_pred CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 673 NLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 673 ~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
..+...+..+.+++.+|++.+|++||++.|++++|++
T Consensus 239 ~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 239 PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 2234566789999999999999999999999999863
No 164
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.97 E-value=6.1e-31 Score=271.91 Aligned_cols=242 Identities=26% Similarity=0.332 Sum_probs=189.5
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
...++.++++++. ..+..|++|.+........+.+.+|++++++++|+||+++++++..++..++|+||+++++|.++
T Consensus 18 ~g~~g~v~~~~~~--~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 95 (268)
T cd06624 18 KGTYGIVYAARDL--STQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSAL 95 (268)
T ss_pred cCCceEEEEeEec--CCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHH
Confidence 3445556655543 23567999988766556677899999999999999999999999999999999999999999999
Q ss_pred hccC-CCC--CHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 525 LFRQ-EIP--TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 525 l~~~-~~l--~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+... ..+ ++..+..++.|++.||.|||+. +|+||||||+||+++.+ .+.+||+|||++.........
T Consensus 96 l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~------~~~~~l~dfg~~~~~~~~~~~- 165 (268)
T cd06624 96 LRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTY------SGVVKISDFGTSKRLAGINPC- 165 (268)
T ss_pred HHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCC------CCeEEEecchhheecccCCCc-
Confidence 9765 444 7888999999999999999998 99999999999999753 568999999998765432221
Q ss_pred ccccccCccccchhcccCC--CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHH-HHHHcCCCChhH
Q 039817 602 STMIRGTMGYMAPEWLRNA--PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVL-YCVRTGNLGATK 678 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~--~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 678 (725)
.....++..|+|||++.+. .++.++||||||+++|||++|+.|+........ ..+.. .......++...
T Consensus 166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06624 166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--------AMFKVGMFKIHPEIPESL 237 (268)
T ss_pred cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--------hHhhhhhhccCCCCCccc
Confidence 2223478899999998654 378999999999999999999999864321110 00000 011122345556
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 679 FERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+.+.+++.+||+.+|++|||+.|++++
T Consensus 238 ~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 238 SAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 7789999999999999999999999875
No 165
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=3.9e-31 Score=277.54 Aligned_cols=236 Identities=22% Similarity=0.288 Sum_probs=188.0
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
..++.++.+.+.. .+..|++|.+........+.+.+|+.++++++|+||+++++.+..+...++||||+++++|.+++
T Consensus 31 g~~~~v~~~~~~~--~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 108 (296)
T cd06654 31 GASGTVYTAMDVA--TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV 108 (296)
T ss_pred CCCeEEEEEEECC--CCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHH
Confidence 3445555555433 34578888887655555678999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 526 FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 526 ~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
.. ..+++.++..++.|++.||.|||+. +|+|+||||+||+++. ++.+||+|||++......... ....
T Consensus 109 ~~-~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~-------~~~~kl~dfg~~~~~~~~~~~-~~~~ 176 (296)
T cd06654 109 TE-TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGM-------DGSVKLTDFGFCAQITPEQSK-RSTM 176 (296)
T ss_pred Hh-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcC-------CCCEEECccccchhccccccc-cCcc
Confidence 54 4578999999999999999999999 9999999999999987 788999999998765432211 1223
Q ss_pred ccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC----CCChhHHHH
Q 039817 606 RGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG----NLGATKFER 681 (725)
Q Consensus 606 ~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 681 (725)
.++..|+|||.+.+..++.++||||||+++|||++|+.||....... ......... ..+......
T Consensus 177 ~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 245 (296)
T cd06654 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-----------ALYLIATNGTPELQNPEKLSAI 245 (296)
T ss_pred cCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-----------hHHHHhcCCCCCCCCccccCHH
Confidence 47889999999998889999999999999999999999986432211 000111111 123345677
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+.+++.+||+.+|++||++.+++++
T Consensus 246 l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 246 FRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHHHCcCCcccCcCHHHHhhC
Confidence 8999999999999999999999985
No 166
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.97 E-value=7.9e-31 Score=273.56 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=189.6
Q ss_pred cHHHHHHHhccc--CCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcC--CceeeeeecccCCCh
Q 039817 447 SYQELREATNVF--DGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKNGTL 521 (725)
Q Consensus 447 ~~~~l~~a~~~~--~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~e~~~~gsL 521 (725)
.++.++.+.... ...+..|++|.+.... ....+.+.+|++++++++|+||+++++++... ...++||||+++++|
T Consensus 16 ~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L 95 (284)
T cd05079 16 HFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSL 95 (284)
T ss_pred CceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCH
Confidence 444554443221 1235679999986443 33456799999999999999999999999875 568899999999999
Q ss_pred hhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 522 SAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 522 ~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
.+++.+. ..+++..+..++.|++.||+|||+. +++||||||+||+++. ++.+||+|||+++........
T Consensus 96 ~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~-------~~~~~l~dfg~~~~~~~~~~~ 165 (284)
T cd05079 96 KEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVES-------EHQVKIGDFGLTKAIETDKEY 165 (284)
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcC-------CCCEEECCCccccccccCccc
Confidence 9999665 4689999999999999999999999 9999999999999987 788999999999876433221
Q ss_pred --cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc----cccCcchHHHHHHHHH--cC
Q 039817 601 --TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT----LANGMILTDWVLYCVR--TG 672 (725)
Q Consensus 601 --~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~ 672 (725)
......++..|+|||.+.+..++.++||||||++++||++++.+.......... ................ ..
T Consensus 166 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (284)
T cd05079 166 YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRL 245 (284)
T ss_pred eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccC
Confidence 112234667899999998888999999999999999999987654322111000 0011111111111111 11
Q ss_pred CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 673 NLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 673 ~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
..+...+..+.+|+.+|++.+|++|||++++++.|+++
T Consensus 246 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 246 PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 22334568899999999999999999999999999875
No 167
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97 E-value=3e-31 Score=277.35 Aligned_cols=247 Identities=21% Similarity=0.255 Sum_probs=182.2
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
..|+.++++.+..+ +..||+|.+.... ......+.+|++++++++||||+++++++..++..++||||+++ +|.++
T Consensus 16 G~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~ 92 (288)
T cd07871 16 GTYATVFKGRSKLT--ENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQY 92 (288)
T ss_pred CCCEEEEEEEECCC--CCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHH
Confidence 34556666655443 4578888875432 23345788999999999999999999999999999999999985 89998
Q ss_pred hccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 525 LFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 525 l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
+... ..+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++........ ..
T Consensus 93 l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~-------~~~~kl~DfG~~~~~~~~~~~-~~ 161 (288)
T cd07871 93 LDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINE-------KGELKLADFGLARAKSVPTKT-YS 161 (288)
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECC-------CCCEEECcCcceeeccCCCcc-cc
Confidence 8654 4578999999999999999999999 9999999999999987 788999999999764332211 12
Q ss_pred ccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc-----c--------C-cchHHHHHHH
Q 039817 604 MIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA-----N--------G-MILTDWVLYC 668 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~-----~--------~-~~~~~~~~~~ 668 (725)
...++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......+.... . . ....++....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
T cd07871 162 NEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYL 241 (288)
T ss_pred CceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccc
Confidence 2347889999998865 5689999999999999999999999864332110000 0 0 0000000000
Q ss_pred HHcC------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 669 VRTG------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 669 ~~~~------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.... .......+.+++++.+|++.||.+|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 242 FPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred cCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 0001234578899999999999999999999865
No 168
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=6.1e-31 Score=271.67 Aligned_cols=237 Identities=24% Similarity=0.317 Sum_probs=188.7
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCc---------cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeeccc
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGD---------GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~---------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~ 517 (725)
.+++++.|.+..+ +..+++|.+...... ..+.+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus 12 ~~~~v~~a~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06628 12 SFGSVYLGMNASS--GELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVP 89 (267)
T ss_pred CCeEEEEEEecCC--CcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecC
Confidence 4445555555433 356788877543222 12568899999999999999999999999999999999999
Q ss_pred CCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcC
Q 039817 518 NGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKD 597 (725)
Q Consensus 518 ~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~ 597 (725)
+++|.+++.....+++..+..++.|++.||+|||+. +++||||+|+||+++. ++.+||+|||+++.....
T Consensus 90 ~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~-------~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 90 GGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDN-------KGGIKISDFGISKKLEAN 159 (267)
T ss_pred CCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcC-------CCCEEecccCCCcccccc
Confidence 999999998878889999999999999999999998 9999999999999987 788999999999876532
Q ss_pred CCc-----cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHH--HH
Q 039817 598 QTR-----TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYC--VR 670 (725)
Q Consensus 598 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 670 (725)
... ......++..|+|||.+.+..++.++||||||++++||++|+.|+...... ...... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----------~~~~~~~~~~ 228 (267)
T cd06628 160 SLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-----------QAIFKIGENA 228 (267)
T ss_pred cccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-----------HHHHHHhccC
Confidence 211 111234788999999999888999999999999999999999998643211 011111 11
Q ss_pred cCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 671 TGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 671 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
....+....+.+.+++.+||+.+|.+||++.||+++
T Consensus 229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 229 SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 223445567889999999999999999999999874
No 169
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=2.7e-31 Score=283.79 Aligned_cols=249 Identities=28% Similarity=0.370 Sum_probs=192.8
Q ss_pred ccccHHHHHHHhcccC-----CcceEEEEEEcccc-cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecc
Q 039817 444 KVFSYQELREATNVFD-----GQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELM 516 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~-----~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~ 516 (725)
....|+.++.|.+... .....||+|.+... .....+++.+|+++++++ +|+||++++++|..++..+++|||+
T Consensus 21 g~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 100 (334)
T cd05100 21 GEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYA 100 (334)
T ss_pred ccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecC
Confidence 3445667776654322 23457899988643 233456899999999999 7999999999999999999999999
Q ss_pred cCCChhhhhccC----------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCC
Q 039817 517 KNGTLSAFLFRQ----------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNN 580 (725)
Q Consensus 517 ~~gsL~~~l~~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~ 580 (725)
++|+|.+++.+. ..+++..+..++.|++.||.|||+. +++||||||+||+++. +
T Consensus 101 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill~~-------~ 170 (334)
T cd05100 101 SKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVTE-------D 170 (334)
T ss_pred CCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcC-------C
Confidence 999999998643 2478899999999999999999998 9999999999999987 7
Q ss_pred CceEEeeccCccccCcCCCcc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccC
Q 039817 581 YITKIADFGLAKLLKKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANG 658 (725)
Q Consensus 581 ~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~ 658 (725)
+.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|+....
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------- 241 (334)
T cd05100 171 NVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP--------- 241 (334)
T ss_pred CcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC---------
Confidence 789999999998654322111 112234567999999999999999999999999999998 666664321
Q ss_pred cchHHHHHHHHHc--CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 039817 659 MILTDWVLYCVRT--GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEV 713 (725)
Q Consensus 659 ~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~ 713 (725)
..+........ ...+......+.+++.+|++.+|++||++.|+++.|+.+...
T Consensus 242 --~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 242 --VEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred --HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 11111111111 123334567899999999999999999999999999987643
No 170
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=267.30 Aligned_cols=251 Identities=26% Similarity=0.292 Sum_probs=193.8
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEccc--ccCccHHHHHHHHHHHhccCcCCccceeeEEEc-----CCceeeeeec
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEK--VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE-----QNHQLLVYEL 515 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-----~~~~~lV~e~ 515 (725)
+....|+-+..|++..++ ..||||++.. ......+.-.+|+++|+.++|+||+.+++.+.. -...|+|+|+
T Consensus 30 iG~GAyGvVcsA~~~~t~--~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~el 107 (359)
T KOG0660|consen 30 IGRGAYGVVCSAKDKRTG--EKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFEL 107 (359)
T ss_pred ccCcceeeEEEEEEcCCC--CEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhH
Confidence 345567777778777766 6899999873 334456778999999999999999999999865 3478999999
Q ss_pred ccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccC
Q 039817 516 MKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLK 595 (725)
Q Consensus 516 ~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~ 595 (725)
|+ .+|.+.++.++.++.....-++.|+++||.|+|+. +++||||||+|++++. +-..||+|||+|+...
T Consensus 108 Me-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~-------~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 108 ME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNA-------DCDLKICDFGLARYLD 176 (359)
T ss_pred Hh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeecc-------CCCEEeccccceeecc
Confidence 95 49999998888899999999999999999999999 9999999999999988 6678999999999875
Q ss_pred cCC-CccccccccCccccchhccc-CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc------cc-Cc-----ch
Q 039817 596 KDQ-TRTSTMIRGTMGYMAPEWLR-NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL------AN-GM-----IL 661 (725)
Q Consensus 596 ~~~-~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~------~~-~~-----~~ 661 (725)
... ....+...-|..|.|||.+. ...|+.+.||||.||++.||++|++.|.+...-.+.. .. .. .-
T Consensus 177 ~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~ 256 (359)
T KOG0660|consen 177 KFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIR 256 (359)
T ss_pred ccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhc
Confidence 431 11234456789999999875 4689999999999999999999999997654332110 00 00 00
Q ss_pred HHHHHHHHHcC-CCC--------hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 662 TDWVLYCVRTG-NLG--------ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 662 ~~~~~~~~~~~-~~~--------~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+.+...+... ..+ ....+..++|+.+||..||.+|+|++|+++|
T Consensus 257 s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 257 SEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred cHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11122222211 111 1345678899999999999999999999976
No 171
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.97 E-value=7.4e-32 Score=293.00 Aligned_cols=241 Identities=21% Similarity=0.221 Sum_probs=185.3
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
...|++|+.|.+..+ +..+|||.+.... ......+.+|++++++++|+||+++++.+.+++..++||||+++|+|
T Consensus 11 ~G~~g~V~~a~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L 88 (376)
T cd05598 11 IGAFGEVCLVRKVDT--NALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDM 88 (376)
T ss_pred eCCCeEEEEEEECCC--CCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcH
Confidence 345666666665544 4578899885422 23346688999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC---
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ--- 598 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~--- 598 (725)
.+++.+.+.+++.....++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||++..+....
T Consensus 89 ~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~-------~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 89 MSLLIRLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDR-------DGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECC-------CCCEEEEeCCCCcccccccccc
Confidence 99998888899999999999999999999999 9999999999999987 7899999999975321000
Q ss_pred ---------------------------------------CccccccccCccccchhcccCCCCCCccceehhHHHHHHHH
Q 039817 599 ---------------------------------------TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639 (725)
Q Consensus 599 ---------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ell 639 (725)
........||+.|+|||.+.+..++.++|||||||++|||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 00011245899999999999999999999999999999999
Q ss_pred hCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC--ChhHHHHHHHHHHHccCCCCCCCC---CHHHHHHH
Q 039817 640 FCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL--GATKFERITMVGLWCICPQPTLRP---SMKQVLQM 706 (725)
Q Consensus 640 tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~dp~~RP---s~~evl~~ 706 (725)
+|+.||........ ...+......... .......+.+++.+|+ .+|.+|+ ++.|++++
T Consensus 239 ~G~~Pf~~~~~~~~--------~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 239 VGQPPFLADTPAET--------QLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hCCCCCCCCCHHHH--------HHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999975432110 0000000000011 1134566777888866 5999999 89999977
No 172
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=3.8e-31 Score=276.80 Aligned_cols=248 Identities=25% Similarity=0.314 Sum_probs=180.3
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhcc---CcCCccceeeEEEc-----CCceeeeee
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRT---HHKNLVQLLGFCIE-----QNHQLLVYE 514 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~-----~~~~~lV~e 514 (725)
...|+++++|.+...+ +..||+|.+.... ......+.+|+.+++++ +||||++++++|.. ....++|||
T Consensus 11 ~G~~g~Vy~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e 89 (290)
T cd07862 11 EGAYGKVFKARDLKNG-GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE 89 (290)
T ss_pred cCCCeEEEEEEEcCCC-CeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEc
Confidence 3456667777654332 4578888875432 22344677788877765 69999999999863 456899999
Q ss_pred cccCCChhhhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcc
Q 039817 515 LMKNGTLSAFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAK 592 (725)
Q Consensus 515 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~ 592 (725)
|++ ++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++
T Consensus 90 ~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~-------~~~~kl~Dfg~~~ 158 (290)
T cd07862 90 HVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTS-------SGQIKLADFGLAR 158 (290)
T ss_pred cCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcC-------CCCEEEccccceE
Confidence 997 5899998654 4589999999999999999999999 9999999999999987 7899999999998
Q ss_pred ccCcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc--c---CcchHHHHH-
Q 039817 593 LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA--N---GMILTDWVL- 666 (725)
Q Consensus 593 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~--~---~~~~~~~~~- 666 (725)
...... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||........... . .....++..
T Consensus 159 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (290)
T cd07862 159 IYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 236 (290)
T ss_pred eccCCc--ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence 654331 22234589999999999988999999999999999999999999875432110000 0 000000000
Q ss_pred -----HHHHc-C-----CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 667 -----YCVRT-G-----NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 667 -----~~~~~-~-----~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..... . .......+.+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 00000 0 0011234677899999999999999999999864
No 173
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1.6e-31 Score=282.06 Aligned_cols=247 Identities=27% Similarity=0.359 Sum_probs=190.0
Q ss_pred cccHHHHHHHhcccC-----CcceEEEEEEccccc-CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeeccc
Q 039817 445 VFSYQELREATNVFD-----GQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMK 517 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~-----~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~ 517 (725)
...|+.++.+..... .....+|+|.+.... .....++.+|+++++++ +|+||+++++++...+..++||||++
T Consensus 28 ~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~ 107 (307)
T cd05098 28 EGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 107 (307)
T ss_pred cCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCC
Confidence 345666666554221 123568999887432 33456788999999999 79999999999999999999999999
Q ss_pred CCChhhhhccC----------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCC
Q 039817 518 NGTLSAFLFRQ----------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNY 581 (725)
Q Consensus 518 ~gsL~~~l~~~----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~ 581 (725)
+++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++. ++
T Consensus 108 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~~-------~~ 177 (307)
T cd05098 108 KGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTE-------DN 177 (307)
T ss_pred CCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEcC-------CC
Confidence 99999999653 2478899999999999999999998 9999999999999987 78
Q ss_pred ceEEeeccCccccCcCCCcc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCc
Q 039817 582 ITKIADFGLAKLLKKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGM 659 (725)
Q Consensus 582 ~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~ 659 (725)
.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..|+.....
T Consensus 178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~--------- 248 (307)
T cd05098 178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--------- 248 (307)
T ss_pred cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH---------
Confidence 89999999987654322111 111224568999999998889999999999999999998 7777643211
Q ss_pred chHHHHHHHHHc--CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 660 ILTDWVLYCVRT--GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 660 ~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
.+........ ...+......+.+++.+|++.+|++||++.+|++.|+.+.+
T Consensus 249 --~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 249 --EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred --HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 1111111111 12334456789999999999999999999999999987653
No 174
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=1.6e-31 Score=283.90 Aligned_cols=231 Identities=25% Similarity=0.260 Sum_probs=180.7
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHH-HHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQ-VIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
.|+.+++|.+..+ +..+|+|.+.... ......+..|.. +++.++||||+++++.+...+..++||||+++++|.
T Consensus 7 ~~g~Vy~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 84 (321)
T cd05603 7 SFGKVLLAKRKSD--GSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELF 84 (321)
T ss_pred CCEEEEEEEECCC--CCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHH
Confidence 4555666655433 4578888875422 223345666655 578899999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+++.+...++...+..++.|+++||.|||+. +|+||||||+||+++. ++.+||+|||+++....... ..
T Consensus 85 ~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~-------~~~~kl~Dfg~~~~~~~~~~-~~ 153 (321)
T cd05603 85 FHLQRERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDS-------QGHVVLTDFGLCKEGVEPEE-TT 153 (321)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECC-------CCCEEEccCCCCccCCCCCC-cc
Confidence 9998878889999999999999999999998 9999999999999987 78999999999875322221 12
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCCCChhHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGNLGATKFER 681 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 681 (725)
....|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ......... ...++......
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~~~i~~~~~~~~~~~~~~ 222 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----------SQMYDNILHKPLQLPGGKTVA 222 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----------HHHHHHHhcCCCCCCCCCCHH
Confidence 334589999999999998999999999999999999999999864321 111111111 12334456678
Q ss_pred HHHHHHHccCCCCCCCCCHH
Q 039817 682 ITMVGLWCICPQPTLRPSMK 701 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~ 701 (725)
+.+++.+|++.+|.+||++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 223 ACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHccCCHhhcCCCC
Confidence 99999999999999999753
No 175
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=5.9e-31 Score=274.22 Aligned_cols=224 Identities=23% Similarity=0.286 Sum_probs=180.7
Q ss_pred ceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhcc-CCCCCHHHHHHHH
Q 039817 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR-QEIPTWDKRVEIA 540 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~ 540 (725)
+..+++|.+........+.+.+|++++++++|+||+++++++..++..++||||+++++|..++.+ ...+++..+..++
T Consensus 30 ~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~ 109 (282)
T cd06643 30 GVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVC 109 (282)
T ss_pred CeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence 457888888765555667899999999999999999999999999999999999999999998865 4678999999999
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhccc--
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR-- 618 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~-- 618 (725)
.|++.||.|||+. +++||||||+||+++. ++.+||+|||++........ ......++..|+|||.+.
T Consensus 110 ~qi~~~L~~LH~~---~i~H~dlkp~nili~~-------~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~ 178 (282)
T cd06643 110 KQTLEALNYLHEN---KIIHRDLKAGNILFTL-------DGDIKLADFGVSAKNTRTIQ-RRDSFIGTPYWMAPEVVMCE 178 (282)
T ss_pred HHHHHHHHHHHHC---CeeecCCCcccEEEcc-------CCCEEEcccccccccccccc-ccccccccccccCHhhcccc
Confidence 9999999999999 9999999999999987 78899999999876533221 122345888999999884
Q ss_pred ---CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc----CCCChhHHHHHHHHHHHccC
Q 039817 619 ---NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT----GNLGATKFERITMVGLWCIC 691 (725)
Q Consensus 619 ---~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~ 691 (725)
+..++.++||||||+++|||++|+.|+...... +........ ...+......+.+++.+||+
T Consensus 179 ~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 247 (282)
T cd06643 179 TSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM-----------RVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLE 247 (282)
T ss_pred CCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH-----------HHHHHHhhcCCCCCCCccccCHHHHHHHHHHcc
Confidence 456788999999999999999999987643211 111111110 11223456789999999999
Q ss_pred CCCCCCCCHHHHHHHh
Q 039817 692 PQPTLRPSMKQVLQML 707 (725)
Q Consensus 692 ~dp~~RPs~~evl~~L 707 (725)
.+|.+||++.+++++-
T Consensus 248 ~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 248 KNVDARWTTTQLLQHP 263 (282)
T ss_pred CChhhCcCHHHHhcCC
Confidence 9999999999998764
No 176
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.97 E-value=7.6e-31 Score=276.40 Aligned_cols=247 Identities=20% Similarity=0.226 Sum_probs=179.6
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
..|+.++.+.+..+ +..||||.+.... ......+.+|++++++++||||+++++++..++..++||||++ ++|.++
T Consensus 16 G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~ 92 (303)
T cd07869 16 GSYATVYKGKSKVN--GKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQY 92 (303)
T ss_pred cCCEEEEEEEECCC--CCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHH
Confidence 34555666655443 3568888876432 2234567899999999999999999999999999999999996 577777
Q ss_pred hccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 525 LFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 525 l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
+... ..++...+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....... ...
T Consensus 93 ~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~-------~~~~kl~Dfg~~~~~~~~~~-~~~ 161 (303)
T cd07869 93 MDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISD-------TGELKLADFGLARAKSVPSH-TYS 161 (303)
T ss_pred HHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECC-------CCCEEECCCCcceeccCCCc-cCC
Confidence 7654 5688999999999999999999999 9999999999999987 78899999999875432221 112
Q ss_pred ccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccccc------CcchHHHHH----HHHHcC
Q 039817 604 MIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN------GMILTDWVL----YCVRTG 672 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~------~~~~~~~~~----~~~~~~ 672 (725)
...+++.|+|||.+.+ ..++.++||||||+++|||++|+.||............ ......+.. ......
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence 2457899999998865 45788999999999999999999999753211000000 000000000 000000
Q ss_pred C----CC---------hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 673 N----LG---------ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 673 ~----~~---------~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
. .+ ......+.+++.+|++.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 0 00 0123567899999999999999999999874
No 177
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=2.2e-31 Score=297.33 Aligned_cols=239 Identities=22% Similarity=0.273 Sum_probs=188.9
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCC--------ceeeeee
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN--------HQLLVYE 514 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--------~~~lV~e 514 (725)
..+|+.|+.|.+..++ ..||||.+... .......+.+|+..+..++|+||+++++.+...+ ..++|||
T Consensus 42 ~G~fG~Vy~a~~~~~g--~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~E 119 (496)
T PTZ00283 42 SGATGTVLCAKRVSDG--EPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLD 119 (496)
T ss_pred cCCCEEEEEEEEcCCC--CEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEe
Confidence 3466777777665544 57888887532 3344567889999999999999999988776432 3679999
Q ss_pred cccCCChhhhhccC----CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccC
Q 039817 515 LMKNGTLSAFLFRQ----EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGL 590 (725)
Q Consensus 515 ~~~~gsL~~~l~~~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgl 590 (725)
|+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+
T Consensus 120 y~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~-------~~~vkL~DFGl 189 (496)
T PTZ00283 120 YANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCS-------NGLVKLGDFGF 189 (496)
T ss_pred CCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeC-------CCCEEEEeccc
Confidence 99999999998643 4688999999999999999999999 9999999999999987 78999999999
Q ss_pred ccccCcCCCc-cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH
Q 039817 591 AKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV 669 (725)
Q Consensus 591 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (725)
++.+...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .+......
T Consensus 190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-----------~~~~~~~~ 258 (496)
T PTZ00283 190 SKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-----------EEVMHKTL 258 (496)
T ss_pred CeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-----------HHHHHHHh
Confidence 9865432221 12235689999999999999999999999999999999999999864321 11111111
Q ss_pred H--cCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 670 R--TGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 670 ~--~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
. ...++....+.+.+++.+||+.||.+||++.+++++
T Consensus 259 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 AGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1 123445667889999999999999999999999875
No 178
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=5.4e-31 Score=280.16 Aligned_cols=238 Identities=25% Similarity=0.262 Sum_probs=186.5
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCc-CCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHH-KNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.+|+.+++|.+.- .+..||||.+... .....+.+..|++++..++| ++|+++++++...+..++||||+++|+|
T Consensus 11 G~~g~Vy~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L 88 (324)
T cd05587 11 GSFGKVMLAERKG--TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL 88 (324)
T ss_pred ccCeEEEEEEECC--CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcH
Confidence 3455566555433 3457899988643 23345678899999999965 5688999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....... .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~-------~~~~kL~Dfg~~~~~~~~~~-~ 157 (324)
T cd05587 89 MYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDA-------EGHIKIADFGMCKENIFGGK-T 157 (324)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcC-------CCCEEEeecCcceecCCCCC-c
Confidence 99998888899999999999999999999999 9999999999999987 78999999999875322111 1
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
.....|+..|+|||++.+..++.++||||||+++|||++|+.|+....... ....+. .....++......
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--------~~~~i~--~~~~~~~~~~~~~ 227 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE--------LFQSIM--EHNVSYPKSLSKE 227 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--------HHHHHH--cCCCCCCCCCCHH
Confidence 223458999999999999999999999999999999999999986432110 011111 1122344556778
Q ss_pred HHHHHHHccCCCCCCCCCH-----HHHHHH
Q 039817 682 ITMVGLWCICPQPTLRPSM-----KQVLQM 706 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~-----~evl~~ 706 (725)
+.+++.+|++.||.+|++. .+++++
T Consensus 228 ~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 228 AVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 9999999999999999976 666654
No 179
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.97 E-value=3.2e-31 Score=286.84 Aligned_cols=240 Identities=21% Similarity=0.235 Sum_probs=186.1
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..|++|+.+.+..++ ..||||.+.... ......+.+|++++..++|+||+++++++..++..++||||+++|+|.
T Consensus 12 G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~ 89 (364)
T cd05599 12 GAFGEVRLVQKKDTG--HIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMM 89 (364)
T ss_pred cCCEEEEEEEECCCC--CEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHH
Confidence 345566666554443 478999886431 234456889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc--
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR-- 600 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~-- 600 (725)
+++.+...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++..+......
T Consensus 90 ~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~-------~~~~kl~Dfg~~~~~~~~~~~~~ 159 (364)
T cd05599 90 TLLMKKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDA-------KGHIKLSDFGLCTGLKKSHRTEF 159 (364)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECC-------CCCEEEeecccceeccccccccc
Confidence 9998888899999999999999999999999 9999999999999987 889999999998754321100
Q ss_pred -----------------------------------cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCC
Q 039817 601 -----------------------------------TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHT 645 (725)
Q Consensus 601 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~ 645 (725)
......||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf 239 (364)
T cd05599 160 YRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPF 239 (364)
T ss_pred cccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCC
Confidence 001135899999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCcchHHHHHHHHHcCCCCh--hHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 039817 646 ELHRVDEPTLANGMILTDWVLYCVRTGNLGA--TKFERITMVGLWCICPQPTLRPS---MKQVLQM 706 (725)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~cl~~dp~~RPs---~~evl~~ 706 (725)
....... ....+.........+. ...+.+.+++.+|+. +|.+|++ +.|++++
T Consensus 240 ~~~~~~~--------~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 240 CSDNPQE--------TYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCHHH--------HHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 6432111 0000100000011111 345678889999996 8999997 9998875
No 180
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.97 E-value=4.7e-31 Score=285.11 Aligned_cols=241 Identities=21% Similarity=0.234 Sum_probs=182.5
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..|++|+.+.+..+ +..+|||.+.... ......+.+|+.++.+++|+||+++++.+.++...++||||+++|+|.
T Consensus 12 G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~ 89 (363)
T cd05628 12 GAFGEVRLVQKKDT--GHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMM 89 (363)
T ss_pred CCCEEEEEEEECCC--CCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHH
Confidence 34556666655443 4578888886432 233456889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC---
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT--- 599 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~--- 599 (725)
+++.+.+.+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.......
T Consensus 90 ~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~-------~~~vkL~DFGla~~~~~~~~~~~ 159 (363)
T cd05628 90 TLLMKKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDS-------KGHVKLSDFGLCTGLKKAHRTEF 159 (363)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECC-------CCCEEEeeccCcccccccccccc
Confidence 9998888899999999999999999999999 9999999999999987 78999999999875432110
Q ss_pred -------------------------------ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCC
Q 039817 600 -------------------------------RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELH 648 (725)
Q Consensus 600 -------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~ 648 (725)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~ 239 (363)
T cd05628 160 YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (363)
T ss_pred cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence 0011246999999999999999999999999999999999999999643
Q ss_pred CCCccccccCcchHHHHHHHHHcCCCCh--hHHHHHHHHHHHccC--CCCCCCCCHHHHHHH
Q 039817 649 RVDEPTLANGMILTDWVLYCVRTGNLGA--TKFERITMVGLWCIC--PQPTLRPSMKQVLQM 706 (725)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~cl~--~dp~~RPs~~evl~~ 706 (725)
.... ....+........++. ...+.+.+++.+++. .++..||+++||+++
T Consensus 240 ~~~~--------~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 240 TPQE--------TYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CHHH--------HHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 2111 0011110000011121 234567777776443 334457999999987
No 181
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.97 E-value=4.2e-31 Score=274.97 Aligned_cols=248 Identities=25% Similarity=0.312 Sum_probs=191.6
Q ss_pred cccHHHHHHHhcccC--CcceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEc-CCceeeeeecccCCC
Q 039817 445 VFSYQELREATNVFD--GQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELMKNGT 520 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~--~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~e~~~~gs 520 (725)
...|+.++.+..... +....|++|.+... .....+.+.+|+.++++++|+||+++++++.. +...++++||+++++
T Consensus 16 ~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (280)
T cd05043 16 EGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGN 95 (280)
T ss_pred ccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCc
Confidence 345566666665432 23678899988643 23345678999999999999999999999876 567899999999999
Q ss_pred hhhhhccC--------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcc
Q 039817 521 LSAFLFRQ--------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAK 592 (725)
Q Consensus 521 L~~~l~~~--------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~ 592 (725)
|.+++... ..+++..+..++.|++.||+|||+. +++|+||||+||+++. ++.+||+|||+++
T Consensus 96 L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~-------~~~~kl~d~g~~~ 165 (280)
T cd05043 96 LKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDE-------ELQVKITDNALSR 165 (280)
T ss_pred HHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcC-------CCcEEECCCCCcc
Confidence 99998653 3578999999999999999999998 9999999999999987 7899999999998
Q ss_pred ccCcCCCcc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHH
Q 039817 593 LLKKDQTRT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVR 670 (725)
Q Consensus 593 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (725)
.+....... .....++..|+|||.+.+..++.++||||||+++||+++ |+.|+..... ..+........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~~- 236 (280)
T cd05043 166 DLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--------FEMAAYLKDGY- 236 (280)
T ss_pred cccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--------HHHHHHHHcCC-
Confidence 654332211 112335678999999998889999999999999999998 8888754311 11111111110
Q ss_pred cCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 671 TGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 671 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
....+...++.+.+++.+||+.+|++|||+.+|++.|+.+.
T Consensus 237 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 237 RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 11122334678999999999999999999999999998764
No 182
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.97 E-value=2.7e-31 Score=277.15 Aligned_cols=239 Identities=26% Similarity=0.287 Sum_probs=189.3
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
.+|++++++.+..+ +..||+|.+.... ......+.+|++++++++|+||+++++.+..++..++||||+++|+|.
T Consensus 11 G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 88 (285)
T cd05605 11 GGFGEVCACQVRAT--GKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK 88 (285)
T ss_pred CCCeEEEEEEEcCC--CceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHH
Confidence 44566666655433 4578999886422 223456789999999999999999999999999999999999999999
Q ss_pred hhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 523 AFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 523 ~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
+++... ..+++..+..++.|++.||.|||+. +++||||||+||++++ ++.++|+|||++........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~-------~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05605 89 FHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDD-------YGHIRISDLGLAVEIPEGET- 157 (285)
T ss_pred HHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECC-------CCCEEEeeCCCceecCCCCc-
Confidence 988654 4689999999999999999999999 9999999999999987 78899999999986543222
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhH
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATK 678 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 678 (725)
.....|+..|+|||.+.+..++.++||||+|+++|||++|+.||....... ..+.+..... ....+...
T Consensus 158 -~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 228 (285)
T cd05605 158 -IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV--------KREEVERRVKEDQEEYSEKF 228 (285)
T ss_pred -cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh--------HHHHHHHHhhhcccccCccc
Confidence 122358899999999998899999999999999999999999997532211 1111111111 12334456
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 679 FERITMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
...+.+++..|++.||++|| ++++++++
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 229 SEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred CHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 77899999999999999999 88899765
No 183
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=1.6e-31 Score=289.92 Aligned_cols=249 Identities=25% Similarity=0.288 Sum_probs=188.0
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCC-----ceeeeeeccc
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN-----HQLLVYELMK 517 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lV~e~~~ 517 (725)
...|+.|+++.+..+ +..||||.+.... ....+.+.+|+++++.++|+||+++++++...+ ..++|+||++
T Consensus 10 ~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~ 87 (372)
T cd07853 10 YGAFGVVWSVTDPRD--GKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ 87 (372)
T ss_pred eCCCEEEEEEEECCC--CCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc
Confidence 445666776665443 4578999886432 234467899999999999999999999998776 7899999997
Q ss_pred CCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcC
Q 039817 518 NGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKD 597 (725)
Q Consensus 518 ~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~ 597 (725)
++|.+++.....+++..+..++.|++.||.|||+. +++||||||+|||++. ++.+||+|||+++.....
T Consensus 88 -~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~-------~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 88 -SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNS-------NCVLKICDFGLARVEEPD 156 (372)
T ss_pred -cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECC-------CCCEEeccccceeecccC
Confidence 58888887778899999999999999999999999 9999999999999987 789999999999865443
Q ss_pred CCccccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc-----ccCcchH------HHH
Q 039817 598 QTRTSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL-----ANGMILT------DWV 665 (725)
Q Consensus 598 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~-----~~~~~~~------~~~ 665 (725)
.........++..|+|||.+.+. .++.++||||||++++||++|+.||.......... ....... ...
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence 33323334578899999998764 57899999999999999999999986543211000 0000000 001
Q ss_pred HHHHHcC-----------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 666 LYCVRTG-----------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 666 ~~~~~~~-----------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
....... .......+.+.+++.+|++.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 1111110 1112335678899999999999999999999976
No 184
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=5.5e-31 Score=270.18 Aligned_cols=243 Identities=30% Similarity=0.439 Sum_probs=191.7
Q ss_pred ccHHHHHHHhcccCC--cceEEEEEEcccccCc-cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDG--QEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~--~~~~vavk~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
.+|+.++.+.+...+ ....|++|.+...... ..+.+.+|++.+.+++|+||+++++++.+.+..+++|||+++++|.
T Consensus 10 g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~ 89 (258)
T smart00219 10 GAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLL 89 (258)
T ss_pred CCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHH
Confidence 455666666655432 3478999998654433 5678999999999999999999999999999999999999999999
Q ss_pred hhhccCCC--CCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 523 AFLFRQEI--PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 523 ~~l~~~~~--l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
+++..... +++..+..++.|++.||+|||+. +++|+||||+||+++. ++.+||+|||+++........
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~-------~~~~~l~dfg~~~~~~~~~~~ 159 (258)
T smart00219 90 DYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGE-------NLVVKISDFGLSRDLYDDDYY 159 (258)
T ss_pred HHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEcc-------CCeEEEcccCCceeccccccc
Confidence 99976543 89999999999999999999999 9999999999999987 779999999999876544222
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHH
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKF 679 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (725)
......++..|+|||.+.+..++.++||||+|++++||++ |..|+..... ....+..... .....+...+
T Consensus 160 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~-~~~~~~~~~~ 230 (258)
T smart00219 160 KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--------EEVLEYLKKG-YRLPKPENCP 230 (258)
T ss_pred ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcC-CCCCCCCcCC
Confidence 2212336789999999988889999999999999999998 6666643211 0111111110 0112233456
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
..+.+++.+|++.+|++|||+.|+++.|
T Consensus 231 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 231 PEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 7899999999999999999999999875
No 185
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97 E-value=8.5e-31 Score=278.51 Aligned_cols=238 Identities=25% Similarity=0.260 Sum_probs=186.6
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.+|++++++.+.- .+..+|||.+.... ....+.+..|.+++..+ +|++|+++++++...+..++||||+++|+|
T Consensus 11 G~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L 88 (323)
T cd05616 11 GSFGKVMLAERKG--TDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL 88 (323)
T ss_pred CCCeEEEEEEECC--CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCH
Confidence 3455556555433 34578888876432 23345677888888877 689999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....... .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~-------~~~~kL~DfG~~~~~~~~~~-~ 157 (323)
T cd05616 89 MYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDS-------EGHIKIADFGMCKENMWDGV-T 157 (323)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECC-------CCcEEEccCCCceecCCCCC-c
Confidence 99998888899999999999999999999999 9999999999999987 78999999999875432221 1
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.|+...... .+...+. .....++....+.
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--------~~~~~i~--~~~~~~p~~~s~~ 227 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIM--EHNVAYPKSMSKE 227 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--------HHHHHHH--hCCCCCCCcCCHH
Confidence 22345899999999999999999999999999999999999999643211 1111111 1122345566788
Q ss_pred HHHHHHHccCCCCCCCCCH-----HHHHHH
Q 039817 682 ITMVGLWCICPQPTLRPSM-----KQVLQM 706 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~-----~evl~~ 706 (725)
+.+++.+|++.+|.+|++. .++.++
T Consensus 228 ~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 228 AVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 9999999999999999974 666544
No 186
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.97 E-value=4.3e-31 Score=275.29 Aligned_cols=255 Identities=24% Similarity=0.397 Sum_probs=194.3
Q ss_pred ccHHHHHHHhccc--CCcceEEEEEEcccccCc-cHHHHHHHHHHHhccCcCCccceeeEEEc--CCceeeeeecccCCC
Q 039817 446 FSYQELREATNVF--DGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIE--QNHQLLVYELMKNGT 520 (725)
Q Consensus 446 ~~~~~l~~a~~~~--~~~~~~vavk~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~e~~~~gs 520 (725)
.+++.++.++... .+.+..+|||.+...... ..+.|.+|++++++++|+||+++++++.. +...++||||+++++
T Consensus 15 g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~ 94 (284)
T cd05038 15 GHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGS 94 (284)
T ss_pred CCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCC
Confidence 3456666665433 345678999998754433 46789999999999999999999999987 567899999999999
Q ss_pred hhhhhccCC-CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 521 LSAFLFRQE-IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 521 L~~~l~~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
|.+++.... .+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++........
T Consensus 95 l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~-------~~~~~l~dfg~~~~~~~~~~ 164 (284)
T cd05038 95 LRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVES-------EDLVKISDFGLAKVLPEDKD 164 (284)
T ss_pred HHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcC-------CCCEEEcccccccccccCCc
Confidence 999997654 689999999999999999999998 9999999999999987 78999999999987653322
Q ss_pred cc--ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc---ccCcchHHHHHHHHHcC--
Q 039817 600 RT--STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL---ANGMILTDWVLYCVRTG-- 672 (725)
Q Consensus 600 ~~--~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-- 672 (725)
.. .....++..|+|||.+.+..++.++||||||++++||++|+.|+.......... .................
T Consensus 165 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd05038 165 YYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGER 244 (284)
T ss_pred ceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCc
Confidence 11 111234567999999988899999999999999999999998875432211000 00001111111111111
Q ss_pred -CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 673 -NLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 673 -~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
..+...+..+.+++.+|++.+|++|||+.||+++|+++
T Consensus 245 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 245 LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 12233457899999999999999999999999999875
No 187
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=2.8e-31 Score=282.51 Aligned_cols=234 Identities=25% Similarity=0.246 Sum_probs=182.2
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHH-HHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQ-VIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.+|+.++++.+.-+ +..+|+|.+.... ......+..|.. +++.++|+||+++++++..++..++||||+++++|
T Consensus 6 G~fg~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L 83 (325)
T cd05602 6 GSFGKVLLARHKAE--EKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 83 (325)
T ss_pred CCCeEEEEEEECCC--CCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcH
Confidence 34556666655433 4578888875422 223344555554 46778999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++.+...++......++.|+++||.|||+. +|+||||||+|||++. ++.+||+|||+++....... .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~-------~~~~kl~DfG~a~~~~~~~~-~ 152 (325)
T cd05602 84 FYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDS-------QGHIVLTDFGLCKENIEHNG-T 152 (325)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECC-------CCCEEEccCCCCcccccCCC-C
Confidence 99998888888899999999999999999999 9999999999999987 78999999999975432221 1
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCCCChhHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGNLGATKFE 680 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 680 (725)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.||...... +....... ..........
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------~~~~~i~~~~~~~~~~~~~ 221 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-----------EMYDNILNKPLQLKPNITN 221 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-----------HHHHHHHhCCcCCCCCCCH
Confidence 22355899999999999999999999999999999999999998643211 11111111 1223345677
Q ss_pred HHHHHHHHccCCCCCCCCCHHHH
Q 039817 681 RITMVGLWCICPQPTLRPSMKQV 703 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~ev 703 (725)
.+.+++.+|++.+|.+||++.+.
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~~~ 244 (325)
T cd05602 222 SARHLLEGLLQKDRTKRLGAKDD 244 (325)
T ss_pred HHHHHHHHHcccCHHHCCCCCCC
Confidence 89999999999999999987643
No 188
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=6.7e-31 Score=271.24 Aligned_cols=244 Identities=24% Similarity=0.371 Sum_probs=191.9
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccc---ccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..++.+++++...+ +..+++|.++. ......+.+.+|++++++++|+||+++++++..++..++||||+++++|.
T Consensus 13 g~~~~v~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (267)
T cd08224 13 GQFSVVYKAICLLD--GRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLS 90 (267)
T ss_pred CCceEEEEEEEcCC--CCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHH
Confidence 34556666666533 35678887653 22334568999999999999999999999999999999999999999999
Q ss_pred hhhcc----CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 523 AFLFR----QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 523 ~~l~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
+++.. ...+++.++..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||+++......
T Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~-------~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 91 RMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITA-------TGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred HHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECC-------CCcEEEeccceeeeccCCC
Confidence 98853 24578999999999999999999999 9999999999999987 7889999999988654332
Q ss_pred CccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCCh
Q 039817 599 TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGA 676 (725)
Q Consensus 599 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 676 (725)
.. .....++..|+|||.+.+..++.++||||||+++|||++|+.|+...... ..+....... ....+.
T Consensus 161 ~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~~~~ 230 (267)
T cd08224 161 TA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---------LYSLCKKIEKCDYPPLPA 230 (267)
T ss_pred cc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc---------HHHHHhhhhcCCCCCCCh
Confidence 21 12234788899999999888999999999999999999999998643211 1111111111 111222
Q ss_pred -hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 677 -TKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 677 -~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
.....+.+++.+|++.+|++|||+.+|+++|+++.
T Consensus 231 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 231 DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 45568999999999999999999999999998753
No 189
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.97 E-value=1.1e-30 Score=273.21 Aligned_cols=248 Identities=25% Similarity=0.376 Sum_probs=188.3
Q ss_pred ccHHHHHHHhcc--cC-CcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNV--FD-GQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~--~~-~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..|+.+++++.. .. .....||+|.+.... ......+.+|+.++++++|+||+++++++..++..++||||+++|+|
T Consensus 17 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 96 (288)
T cd05061 17 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 96 (288)
T ss_pred CCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCH
Confidence 344555554322 11 234679999876432 22345688999999999999999999999999999999999999999
Q ss_pred hhhhccC----------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCc
Q 039817 522 SAFLFRQ----------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLA 591 (725)
Q Consensus 522 ~~~l~~~----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla 591 (725)
.+++.+. ..+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||++
T Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~-------~~~~~L~Dfg~~ 166 (288)
T cd05061 97 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAH-------DFTVKIGDFGMT 166 (288)
T ss_pred HHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcC-------CCcEEECcCCcc
Confidence 9999642 2346778899999999999999999 9999999999999987 788999999999
Q ss_pred cccCcCCCc-cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHH
Q 039817 592 KLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCV 669 (725)
Q Consensus 592 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (725)
+........ ......++..|+|||.+.+..++.++||||||++++||++ |..|+..... .+......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-----------~~~~~~~~ 235 (288)
T cd05061 167 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-----------EQVLKFVM 235 (288)
T ss_pred ccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHH
Confidence 865332221 1112235678999999998899999999999999999998 5666643211 11111111
Q ss_pred Hc--CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCC
Q 039817 670 RT--GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVG 714 (725)
Q Consensus 670 ~~--~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 714 (725)
.. ...+...++.+.+++.+|++.+|++|||+.++++.|++.....
T Consensus 236 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~ 282 (288)
T cd05061 236 DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPS 282 (288)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCC
Confidence 11 1223344678999999999999999999999999999865443
No 190
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.97 E-value=4.5e-31 Score=282.94 Aligned_cols=248 Identities=26% Similarity=0.382 Sum_probs=189.2
Q ss_pred ccccHHHHHHHhccc---CCcceEEEEEEccccc-CccHHHHHHHHHHHhcc-CcCCccceeeEEEcC-Cceeeeeeccc
Q 039817 444 KVFSYQELREATNVF---DGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQ-NHQLLVYELMK 517 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~---~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~-~~~~lV~e~~~ 517 (725)
...+|+.|++|.+.- ......||||.++... ......+.+|+.++.++ +|+||+++++++... ...++||||++
T Consensus 16 G~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~ 95 (343)
T cd05103 16 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 95 (343)
T ss_pred cCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccC
Confidence 456677888776432 1235689999986532 23345788999999999 789999999988754 46789999999
Q ss_pred CCChhhhhccC-------------------------------------------------------------------CC
Q 039817 518 NGTLSAFLFRQ-------------------------------------------------------------------EI 530 (725)
Q Consensus 518 ~gsL~~~l~~~-------------------------------------------------------------------~~ 530 (725)
+|+|.+++... ..
T Consensus 96 ~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (343)
T cd05103 96 FGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKV 175 (343)
T ss_pred CCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhcc
Confidence 99999998542 13
Q ss_pred CCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-cccccccCc
Q 039817 531 PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR-TSTMIRGTM 609 (725)
Q Consensus 531 l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~ 609 (725)
+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||++......... ......++.
T Consensus 176 ~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~-------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd05103 176 LTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSE-------NNVVKICDFGLARDIYKDPDYVRKGDARLPL 245 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcC-------CCcEEEEecccccccccCcchhhcCCCCCCc
Confidence 57888899999999999999999 9999999999999987 789999999999865332211 111233567
Q ss_pred cccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHc---CCCChhHHHHHHHH
Q 039817 610 GYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRT---GNLGATKFERITMV 685 (725)
Q Consensus 610 ~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~l 685 (725)
.|+|||.+.+..++.++||||||+++|||++ |..|+....... ........ ...+....+.+.++
T Consensus 246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (343)
T cd05103 246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----------EFCRRLKEGTRMRAPDYTTPEMYQT 314 (343)
T ss_pred ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-----------HHHHHHhccCCCCCCCCCCHHHHHH
Confidence 8999999988899999999999999999997 777775332111 01111111 12223345678999
Q ss_pred HHHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 686 GLWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 686 ~~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
+..||+.+|++|||+.||+++|+.+.+
T Consensus 315 ~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 315 MLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999987653
No 191
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.97 E-value=3.7e-31 Score=285.93 Aligned_cols=239 Identities=19% Similarity=0.192 Sum_probs=185.5
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
...+|+.++.+.+..+ +..+|+|.+.+. .....+.+.+|+.+++.++||||+++++++..++..++||||+++|+
T Consensus 52 G~G~fg~Vy~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~ 129 (370)
T cd05621 52 GRGAFGEVQLVRHKSS--QKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGD 129 (370)
T ss_pred EecCCeEEEEEEECCC--CCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCc
Confidence 3445666666665443 356788887532 22334568899999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||++.........
T Consensus 130 L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~-------~~~~kL~DFG~a~~~~~~~~~ 198 (370)
T cd05621 130 LVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDK-------HGHLKLADFGTCMKMDETGMV 198 (370)
T ss_pred HHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECC-------CCCEEEEecccceecccCCce
Confidence 99998654 578899999999999999999999 9999999999999987 789999999999876433222
Q ss_pred cccccccCccccchhcccCC----CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH---cCC
Q 039817 601 TSTMIRGTMGYMAPEWLRNA----PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR---TGN 673 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~----~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 673 (725)
......||+.|+|||.+.+. .++.++||||||+++|||++|+.||...... ........ ...
T Consensus 199 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~-----------~~~~~i~~~~~~~~ 267 (370)
T cd05621 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV-----------GTYSKIMDHKNSLN 267 (370)
T ss_pred ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH-----------HHHHHHHhCCcccC
Confidence 22345699999999998754 3788999999999999999999999643211 11111111 111
Q ss_pred CCh--hHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 039817 674 LGA--TKFERITMVGLWCICPQPTL--RPSMKQVLQM 706 (725)
Q Consensus 674 ~~~--~~~~~l~~l~~~cl~~dp~~--RPs~~evl~~ 706 (725)
.+. .....+.+++..|++.++.+ ||++.|++++
T Consensus 268 ~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 268 FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 222 34677889999999866654 8999999988
No 192
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.97 E-value=2.1e-31 Score=289.42 Aligned_cols=241 Identities=20% Similarity=0.185 Sum_probs=185.2
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
...|++|+.+.+..++ ..||||.+... .....+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus 11 ~G~~g~Vy~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L 88 (377)
T cd05629 11 KGAFGEVRLVQKKDTG--KIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDL 88 (377)
T ss_pred ecCCEEEEEEEECCCC--CEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcH
Confidence 3456666666665544 46888887542 223456788999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR- 600 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~- 600 (725)
.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.+......
T Consensus 89 ~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~-------~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 89 MTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDR-------GGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECC-------CCCEEEeecccccccccccccc
Confidence 99998888899999999999999999999999 9999999999999987 789999999999643211000
Q ss_pred ---------------------------------------------cccccccCccccchhcccCCCCCCccceehhHHHH
Q 039817 601 ---------------------------------------------TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVML 635 (725)
Q Consensus 601 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl 635 (725)
......||+.|+|||.+.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 00013589999999999999999999999999999
Q ss_pred HHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCCh--hHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 039817 636 LEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA--TKFERITMVGLWCICPQPTLR---PSMKQVLQM 706 (725)
Q Consensus 636 ~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~cl~~dp~~R---Ps~~evl~~ 706 (725)
|||++|+.||....... ....+........++. .....+.+++.+|++ +|.+| +++.|++++
T Consensus 239 ~elltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 239 FECLIGWPPFCSENSHE--------TYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhcCCCCCCCCCHHH--------HHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 99999999986432111 0000000000111122 245678899999997 66665 699999987
No 193
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=8.2e-31 Score=268.92 Aligned_cols=235 Identities=23% Similarity=0.350 Sum_probs=187.2
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
+++++.+.+..+ +..+++|.+... .....+.+.+|++++++++|+||+++++++.+.+..++||||+++++|.+++
T Consensus 13 ~g~v~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~ 90 (256)
T cd08221 13 FGEATLYRRTED--DSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKI 90 (256)
T ss_pred CceEEEEEEcCC--CcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHH
Confidence 444444444433 346788876532 3445667899999999999999999999999999999999999999999999
Q ss_pred ccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 526 FRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 526 ~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
.+. ..+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++........ ...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~-------~~~~kl~d~~~~~~~~~~~~-~~~ 159 (256)
T cd08221 91 VRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTK-------AGLIKLGDFGISKILGSEYS-MAE 159 (256)
T ss_pred HhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeC-------CCCEEECcCcceEEcccccc-ccc
Confidence 765 4679999999999999999999998 9999999999999987 77899999999986644332 122
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC---ChhHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL---GATKFE 680 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 680 (725)
...++..|+|||.+.+..++.++||||||++++||++|+.|++.... .+..... ..+.. +.....
T Consensus 160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----------~~~~~~~-~~~~~~~~~~~~~~ 227 (256)
T cd08221 160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----------LNLVVKI-VQGNYTPVVSVYSS 227 (256)
T ss_pred ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----------HHHHHHH-HcCCCCCCccccCH
Confidence 34588899999999888899999999999999999999998864321 1111111 11222 234567
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 681 RITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
.+.+++.+|++.+|.+||+++++++++
T Consensus 228 ~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 228 ELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 899999999999999999999999874
No 194
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=6e-31 Score=271.80 Aligned_cols=239 Identities=21% Similarity=0.263 Sum_probs=184.3
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhcc
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR 527 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~ 527 (725)
++.++.|.+.. .+..+++|.++.........+.+|+.+++.++||||+++++.+..++..++|+||+++++|.+++..
T Consensus 22 ~~~v~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 99 (267)
T cd06645 22 YGDVYKARNVN--TGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV 99 (267)
T ss_pred CeEEEEEEEcC--CCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh
Confidence 33444443332 3457888887655445556788999999999999999999999999999999999999999999988
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccccc
Q 039817 528 QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRG 607 (725)
Q Consensus 528 ~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g 607 (725)
.+.+++.+...++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++........ ......|
T Consensus 100 ~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~-------~~~~~l~dfg~~~~~~~~~~-~~~~~~~ 168 (267)
T cd06645 100 TGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTD-------NGHVKLADFGVSAQITATIA-KRKSFIG 168 (267)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECC-------CCCEEECcceeeeEccCccc-ccccccC
Confidence 88899999999999999999999999 9999999999999987 78899999999876543221 1223458
Q ss_pred Cccccchhccc---CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC--ChhHHHHH
Q 039817 608 TMGYMAPEWLR---NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL--GATKFERI 682 (725)
Q Consensus 608 t~~y~aPE~~~---~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 682 (725)
+..|+|||.+. ...++.++||||||+++|||++|+.|+........ .............. .....+.+
T Consensus 169 ~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 241 (267)
T cd06645 169 TPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-------LFLMTKSNFQPPKLKDKMKWSNSF 241 (267)
T ss_pred cccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-------HHhhhccCCCCCcccccCCCCHHH
Confidence 89999999874 45688999999999999999999998754321110 00000000000000 11234678
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+++.+|++.+|++||++++|+++
T Consensus 242 ~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 242 HHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HHHHHHHccCCchhCcCHHHHhcC
Confidence 899999999999999999999875
No 195
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.97 E-value=1.4e-30 Score=267.19 Aligned_cols=222 Identities=28% Similarity=0.384 Sum_probs=178.2
Q ss_pred ceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEE-cCCceeeeeecccCCChhhhhccCC--CCCHHHHHH
Q 039817 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCI-EQNHQLLVYELMKNGTLSAFLFRQE--IPTWDKRVE 538 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~-~~~~~~lV~e~~~~gsL~~~l~~~~--~l~~~~~~~ 538 (725)
+..+++|.++.. ...+.|.+|+.++++++|+|++++++++. .++..++||||+++++|.+++.+.. .+++..+..
T Consensus 29 ~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 106 (256)
T cd05082 29 GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 106 (256)
T ss_pred CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHH
Confidence 346788887542 34567999999999999999999999765 4567899999999999999997643 478999999
Q ss_pred HHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhccc
Q 039817 539 IALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR 618 (725)
Q Consensus 539 i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 618 (725)
++.|++.||+|||+. +++||||||+||+++. ++.+||+|||+++....... ...++..|+|||++.
T Consensus 107 ~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~-------~~~~kl~dfg~~~~~~~~~~----~~~~~~~y~aPE~~~ 172 (256)
T cd05082 107 FSLDVCEAMEYLEAN---NFVHRDLAARNVLVSE-------DNVAKVSDFGLTKEASSTQD----TGKLPVKWTAPEALR 172 (256)
T ss_pred HHHHHHHHHHHHHhC---CEeccccchheEEEcC-------CCcEEecCCccceeccccCC----CCccceeecCHHHHc
Confidence 999999999999999 9999999999999987 78999999999875433221 123456899999999
Q ss_pred CCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhHHHHHHHHHHHccCCCCC
Q 039817 619 NAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATKFERITMVGLWCICPQPT 695 (725)
Q Consensus 619 ~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~dp~ 695 (725)
+..++.++||||||+++|||++ |+.|+..... .+....... ....+...+..+.+++.+|++.+|+
T Consensus 173 ~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 241 (256)
T cd05082 173 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----------KDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAA 241 (256)
T ss_pred cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChh
Confidence 8899999999999999999997 8877653211 111111111 1223345567899999999999999
Q ss_pred CCCCHHHHHHHhcCC
Q 039817 696 LRPSMKQVLQMLEGT 710 (725)
Q Consensus 696 ~RPs~~evl~~L~~~ 710 (725)
+|||++++++.|+.+
T Consensus 242 ~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 242 TRPSFLQLREQLEHI 256 (256)
T ss_pred hCcCHHHHHHHHhcC
Confidence 999999999999864
No 196
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.97 E-value=4.1e-31 Score=273.27 Aligned_cols=245 Identities=22% Similarity=0.299 Sum_probs=178.0
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.+|++++.+...-......+++|.+.... ....+.|.+|+.++++++||||+++++.|......++||||+++|+|.++
T Consensus 6 G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 85 (268)
T cd05086 6 GWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSY 85 (268)
T ss_pred CcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHH
Confidence 34555555443222333456677665432 23457899999999999999999999999999999999999999999999
Q ss_pred hccC----CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC-C
Q 039817 525 LFRQ----EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ-T 599 (725)
Q Consensus 525 l~~~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~-~ 599 (725)
+.+. ...++.....++.|+++||.|||+. +++||||||+|||++. ++.+||+|||++....... .
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~-------~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 86 LSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTS-------DLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred HHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcC-------CccEEecccccccccCcchhh
Confidence 9754 3456777889999999999999998 9999999999999987 7889999999986432211 1
Q ss_pred ccccccccCccccchhcccC-------CCCCCccceehhHHHHHHHHhCC-cCCCCCCCCccccccCcchHHHHHHH---
Q 039817 600 RTSTMIRGTMGYMAPEWLRN-------APVTAKVDVYSFGVMLLEIIFCK-RHTELHRVDEPTLANGMILTDWVLYC--- 668 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~-------~~~~~ksDv~S~G~vl~elltg~-~~~~~~~~~~~~~~~~~~~~~~~~~~--- 668 (725)
.......++..|+|||++.. ..++.++||||||+++|||+++. .|+..... . ..........
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~------~~~~~~~~~~~~~ 228 (268)
T cd05086 156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-R------EVLNHVIKDQQVK 228 (268)
T ss_pred hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-H------HHHHHHHhhcccc
Confidence 11223457889999998743 24578999999999999999754 45532211 0 0000001000
Q ss_pred HHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 669 VRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 669 ~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
.....+.....+.+.+++..|| .+|++||++++|++.|.
T Consensus 229 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 229 LFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 0112233345678888999999 57999999999999884
No 197
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.9e-31 Score=290.81 Aligned_cols=242 Identities=21% Similarity=0.191 Sum_probs=179.6
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.+|+.|+++.+... +..||||... ...+.+|++++++++|+|||++++++..++..++|||++. ++|.+++
T Consensus 180 G~~G~Vy~a~~~~~--~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l 250 (461)
T PHA03211 180 GSEGCVFESSHPDY--PQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYL 250 (461)
T ss_pred CCCeEEEEEEECCC--CCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHH
Confidence 45566666655443 3567888532 2346789999999999999999999999999999999995 6888888
Q ss_pred ccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-ccc
Q 039817 526 FRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR-TST 603 (725)
Q Consensus 526 ~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~-~~~ 603 (725)
... ..+++..+..|+.|+++||.|||+. +|+||||||+|||++. ++.+||+|||+++........ ...
T Consensus 251 ~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~-------~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 251 GARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNG-------PEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred HhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECC-------CCCEEEcccCCceeccccccccccc
Confidence 654 5689999999999999999999999 9999999999999987 788999999999865433221 122
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHH----------------
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLY---------------- 667 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 667 (725)
...||..|+|||++.+..++.++|||||||+||||++|..++...............+...+..
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 3568999999999999999999999999999999999886554322111000000000000000
Q ss_pred --HHH----cCCCC----------hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 668 --CVR----TGNLG----------ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 668 --~~~----~~~~~----------~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
... ....+ ......+.+|+.+||+.||++|||+.|++++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000 00000 0123468889999999999999999999986
No 198
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.97 E-value=4.4e-31 Score=278.19 Aligned_cols=248 Identities=25% Similarity=0.375 Sum_probs=190.3
Q ss_pred ccccHHHHHHHhcccCCcc--eEEEEEEcccccC-ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 444 KVFSYQELREATNVFDGQE--VEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~--~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
...+++.++++.+.-.+.. ..|++|.+..... ....++.+|+.++++++|+||++++|+|... ..++++||+++|+
T Consensus 16 g~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~ 94 (303)
T cd05110 16 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGC 94 (303)
T ss_pred ccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCC
Confidence 3455677777776555543 4688898865332 2344789999999999999999999999754 4679999999999
Q ss_pred hhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 521 LSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 521 L~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
|.+++... ..+++..+..++.|++.||.|||+. +|+|+||||+||+++. ++.+||+|||+++.......
T Consensus 95 l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~-------~~~~kL~Dfg~~~~~~~~~~ 164 (303)
T cd05110 95 LLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKS-------PNHVKITDFGLARLLEGDEK 164 (303)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecC-------CCceEEccccccccccCccc
Confidence 99998765 4689999999999999999999999 9999999999999977 67899999999987643322
Q ss_pred cc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChh
Q 039817 600 RT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGAT 677 (725)
Q Consensus 600 ~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (725)
.. .....++..|+|||.+.+..++.++||||||+++|||++ |+.|+...... ...+.+.. ......+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~-~~~~~~~~~ 235 (303)
T cd05110 165 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--------EIPDLLEK-GERLPQPPI 235 (303)
T ss_pred ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHC-CCCCCCCCC
Confidence 11 112335678999999999999999999999999999997 78877532110 01111111 001112233
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 678 KFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
....+.+++..||..+|++||+++++++.|+.+.
T Consensus 236 ~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 236 CTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 4567899999999999999999999999998754
No 199
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.97 E-value=2.5e-30 Score=266.18 Aligned_cols=239 Identities=29% Similarity=0.395 Sum_probs=190.7
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
..++.+++|... +...++||.+... ....+++.+|++++++++|+||+++++++......++||||+++++|.+++
T Consensus 17 g~~~~v~~~~~~---~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i 92 (261)
T cd05034 17 GQFGEVWMGTWN---GTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFL 92 (261)
T ss_pred CcceEEEEEEEc---CCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHH
Confidence 345566665532 2356899988753 345678999999999999999999999999989999999999999999999
Q ss_pred ccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 526 FRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 526 ~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++............
T Consensus 93 ~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~-------~~~~~l~d~g~~~~~~~~~~~~~~ 162 (261)
T cd05034 93 KSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGE-------NLVCKIADFGLARLIEDDEYTARE 162 (261)
T ss_pred hccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcC-------CCCEEECccccceeccchhhhhhh
Confidence 765 4689999999999999999999999 9999999999999987 789999999999876543222222
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATKFE 680 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 680 (725)
....+..|+|||.+.+..++.++||||||++++|+++ |+.|+..... ......... ....+...++
T Consensus 163 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 231 (261)
T cd05034 163 GAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-----------REVLEQVERGYRMPRPPNCPE 231 (261)
T ss_pred ccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHHcCCCCCCCCCCCH
Confidence 2334568999999998889999999999999999998 8887753211 111111111 1123334567
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 681 RITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
.+.+++.+|++.+|++||+++++++.|+.
T Consensus 232 ~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 232 ELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 89999999999999999999999999975
No 200
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=5.9e-31 Score=275.55 Aligned_cols=224 Identities=22% Similarity=0.345 Sum_probs=181.1
Q ss_pred ceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHH
Q 039817 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIAL 541 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~ 541 (725)
+..|+||.+........+.+.+|+..+++++|+||+++++.+..++..++||||+++++|.+++.. ..+++..+..++.
T Consensus 47 ~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~ 125 (292)
T cd06658 47 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCL 125 (292)
T ss_pred CCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHH
Confidence 457899988655555567799999999999999999999999999999999999999999998854 4589999999999
Q ss_pred HHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCCC
Q 039817 542 GIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP 621 (725)
Q Consensus 542 qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 621 (725)
|++.||.|||+. +|+||||||+||+++. ++.+||+|||++......... .....++..|+|||.+.+..
T Consensus 126 qi~~~l~~LH~~---~ivH~dlkp~Nill~~-------~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~ 194 (292)
T cd06658 126 SVLRALSYLHNQ---GVIHRDIKSDSILLTS-------DGRIKLSDFGFCAQVSKEVPK-RKSLVGTPYWMAPEVISRLP 194 (292)
T ss_pred HHHHHHHHHHHC---CEeecCCCHHHEEEcC-------CCCEEEccCcchhhccccccc-CceeecCccccCHHHHccCC
Confidence 999999999999 9999999999999987 788999999998765432221 12245788999999998888
Q ss_pred CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCC--CChhHHHHHHHHHHHccCCCCCCCCC
Q 039817 622 VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGN--LGATKFERITMVGLWCICPQPTLRPS 699 (725)
Q Consensus 622 ~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dp~~RPs 699 (725)
++.++||||||++++||++|+.|+....... ....+.... ... ......+.+.+++.+|++.+|.+|||
T Consensus 195 ~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 265 (292)
T cd06658 195 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ--------AMRRIRDNL-PPRVKDSHKVSSVLRGFLDLMLVREPSQRAT 265 (292)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhcC-CCccccccccCHHHHHHHHHHccCChhHCcC
Confidence 9999999999999999999999986432110 001111110 111 11234567889999999999999999
Q ss_pred HHHHHHH
Q 039817 700 MKQVLQM 706 (725)
Q Consensus 700 ~~evl~~ 706 (725)
++|++++
T Consensus 266 ~~~il~~ 272 (292)
T cd06658 266 AQELLQH 272 (292)
T ss_pred HHHHhhC
Confidence 9999986
No 201
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.9e-30 Score=270.73 Aligned_cols=236 Identities=25% Similarity=0.356 Sum_probs=185.6
Q ss_pred ceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHH
Q 039817 462 EVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540 (725)
Q Consensus 462 ~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~ 540 (725)
+..+|+|.+... .....+.+.+|+++++.++|+||+++++++...+..++||||+++++|.+++.+.+.+++.....++
T Consensus 30 ~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 109 (284)
T cd06620 30 GTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIA 109 (284)
T ss_pred CcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHH
Confidence 456788876543 2344678999999999999999999999999999999999999999999999887889999999999
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCC
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 620 (725)
.|++.||.|||+. .+++|+||+|+||+++. ++.++|+|||++........ ....++..|+|||.+.+.
T Consensus 110 ~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~-------~~~~~l~d~gl~~~~~~~~~---~~~~~~~~~~aPE~~~~~ 177 (284)
T cd06620 110 VAVVEGLTYLYNV--HRIMHRDIKPSNILVNS-------RGQIKLCDFGVSGELINSIA---DTFVGTSTYMSPERIQGG 177 (284)
T ss_pred HHHHHHHHHHHHh--cCeeccCCCHHHEEECC-------CCcEEEccCCcccchhhhcc---CccccCcccCCHHHHccC
Confidence 9999999999973 17999999999999987 78899999999875432211 224588999999999888
Q ss_pred CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC--CCCh-hHHHHHHHHHHHccCCCCCCC
Q 039817 621 PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG--NLGA-TKFERITMVGLWCICPQPTLR 697 (725)
Q Consensus 621 ~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~l~~l~~~cl~~dp~~R 697 (725)
.++.++||||||++++|+++|+.|+.................+......... .++. ..+..+.+++.+|++.||++|
T Consensus 178 ~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 257 (284)
T cd06620 178 KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTER 257 (284)
T ss_pred CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccC
Confidence 9999999999999999999999998754332111111111222222222211 1222 255689999999999999999
Q ss_pred CCHHHHHHHhcC
Q 039817 698 PSMKQVLQMLEG 709 (725)
Q Consensus 698 Ps~~evl~~L~~ 709 (725)
||++|++++.--
T Consensus 258 pt~~e~~~~~~~ 269 (284)
T cd06620 258 PTPQQLCAMPPF 269 (284)
T ss_pred cCHHHHhcCccc
Confidence 999999998543
No 202
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=1.3e-30 Score=275.18 Aligned_cols=247 Identities=21% Similarity=0.308 Sum_probs=186.6
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
+|++++.+.+..+ +..+++|.+... .......+.+|++++++++||||+++++.+..++..++||||+++++|.+++
T Consensus 13 ~~g~v~~~~~~~~--~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l 90 (308)
T cd06615 13 NGGVVTKVLHRPS--GLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL 90 (308)
T ss_pred CCeEEEEEEEcCC--CeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHH
Confidence 4455555544433 356788887543 2233456899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 526 FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 526 ~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
.+.+.+++..+..++.|+++||.|||+. .+++|+||||+||+++. ++.+||+|||++....... ....
T Consensus 91 ~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~-------~~~~~l~dfg~~~~~~~~~---~~~~ 158 (308)
T cd06615 91 KKAGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNS-------RGEIKLCDFGVSGQLIDSM---ANSF 158 (308)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEec-------CCcEEEccCCCcccccccc---cccC
Confidence 8888899999999999999999999973 17999999999999987 7789999999987553321 1224
Q ss_pred ccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc---------c----------------cCcc
Q 039817 606 RGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL---------A----------------NGMI 660 (725)
Q Consensus 606 ~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~---------~----------------~~~~ 660 (725)
.++..|+|||.+.+..++.++||||||++++||++|+.|+.......... . ....
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (308)
T cd06615 159 VGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA 238 (308)
T ss_pred CCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence 57889999999988889999999999999999999999875322110000 0 0000
Q ss_pred hHHHHHHHHHcC--CCC-hhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 661 LTDWVLYCVRTG--NLG-ATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 661 ~~~~~~~~~~~~--~~~-~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
..+......... ..+ ......+.+++.+||+.+|++|||++||+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 239 IFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred HHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 011111111110 111 12456789999999999999999999999873
No 203
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.97 E-value=8e-31 Score=272.76 Aligned_cols=243 Identities=26% Similarity=0.381 Sum_probs=192.7
Q ss_pred ccHHHHHHHhcccCCc--ceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQ--EVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~--~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
.+++.+++|+...++. ...+++|.+.... .....++.+|+.++++++|+||+++++++.. ...++||||+++|+|.
T Consensus 18 g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~ 96 (279)
T cd05057 18 GAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLL 96 (279)
T ss_pred CCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHH
Confidence 4566777777655544 3578999886543 2345679999999999999999999999987 7889999999999999
Q ss_pred hhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+++... ..+++..+..++.|++.||+|||+. +++|+||||+||+++. ++.+||+|||+++.........
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~-------~~~~kL~dfg~~~~~~~~~~~~ 166 (279)
T cd05057 97 DYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKT-------PQHVKITDFGLAKLLDVDEKEY 166 (279)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcC-------CCeEEECCCcccccccCcccce
Confidence 999765 4689999999999999999999998 9999999999999987 7789999999998764332211
Q ss_pred c-cccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcC---CCCh
Q 039817 602 S-TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTG---NLGA 676 (725)
Q Consensus 602 ~-~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 676 (725)
. ....++..|+|||.+....++.++||||||++++|+++ |+.|+..... .+ +......+ ..+.
T Consensus 167 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----------~~-~~~~~~~~~~~~~~~ 234 (279)
T cd05057 167 HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-----------VE-IPDLLEKGERLPQPP 234 (279)
T ss_pred ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-----------HH-HHHHHhCCCCCCCCC
Confidence 1 11223567999999988889999999999999999998 8888864321 11 11111111 2233
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
.....+.+++.+||..+|.+||++.++++.|+.+.
T Consensus 235 ~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05057 235 ICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMA 269 (279)
T ss_pred CCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 34567889999999999999999999999998764
No 204
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=9.6e-31 Score=274.55 Aligned_cols=235 Identities=23% Similarity=0.281 Sum_probs=187.8
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
.++.++++.+..+ +..|++|.+........+.+.+|++++++++|+||+++++++..++..++|+||+++++|.+++.
T Consensus 31 ~~g~vy~~~~~~~--~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 108 (296)
T cd06655 31 ASGTVFTAIDVAT--GQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVT 108 (296)
T ss_pred CCeEEEEEEEcCC--CcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHH
Confidence 3444555544333 45788888865555556788999999999999999999999999999999999999999999885
Q ss_pred cCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccc
Q 039817 527 RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIR 606 (725)
Q Consensus 527 ~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 606 (725)
+ ..+++.++..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++......... .....
T Consensus 109 ~-~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~-------~~~~kl~dfg~~~~~~~~~~~-~~~~~ 176 (296)
T cd06655 109 E-TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGM-------DGSVKLTDFGFCAQITPEQSK-RSTMV 176 (296)
T ss_pred h-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC-------CCCEEEccCccchhccccccc-CCCcC
Confidence 4 4689999999999999999999999 9999999999999987 788999999998865433221 12235
Q ss_pred cCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc----CCCChhHHHHH
Q 039817 607 GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT----GNLGATKFERI 682 (725)
Q Consensus 607 gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l 682 (725)
++..|+|||.+.+..++.++||||||+++|||++|+.|+....... ........ ...+......+
T Consensus 177 ~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 245 (296)
T cd06655 177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-----------ALYLIATNGTPELQNPEKLSPIF 245 (296)
T ss_pred CCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----------HHHHHHhcCCcccCCcccCCHHH
Confidence 7889999999998889999999999999999999999986543211 01111111 11233456778
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+++.+||+.+|++||++.+++++
T Consensus 246 ~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 246 RDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred HHHHHHHhhcChhhCCCHHHHhhC
Confidence 999999999999999999999964
No 205
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=2.1e-31 Score=284.15 Aligned_cols=236 Identities=21% Similarity=0.207 Sum_probs=181.9
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhcc---CcCCccceeeEEEcCCceeeeeecccCC
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRT---HHKNLVQLLGFCIEQNHQLLVYELMKNG 519 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~~~lV~e~~~~g 519 (725)
.+|++++.+.+..+ +..||||.+.... ......+..|..++.+. +||||+++++.+...+..++||||+++|
T Consensus 4 G~~g~Vy~~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g 81 (330)
T cd05586 4 GTFGQVYQVRKKDT--RRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGG 81 (330)
T ss_pred CCceEEEEEEECCC--CCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCC
Confidence 34556666665444 3578888875422 12233456677777665 6999999999999999999999999999
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 520 sL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
+|.+++.+...+++..+..++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++.......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~-------~~~~kl~Dfg~a~~~~~~~~ 151 (330)
T cd05586 82 ELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDA-------TGHIALCDFGLSKANLTDNK 151 (330)
T ss_pred hHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECC-------CCCEEEecCCcCcCCCCCCC
Confidence 9999998888899999999999999999999999 9999999999999987 78899999999875432221
Q ss_pred ccccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC--CCCh
Q 039817 600 RTSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG--NLGA 676 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 676 (725)
. .....||..|+|||.+.+. .++.++||||||+++|||++|+.|+...... + .......+ .++.
T Consensus 152 ~-~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~-----------~-~~~~i~~~~~~~~~ 218 (330)
T cd05586 152 T-TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-----------Q-MYRNIAFGKVRFPK 218 (330)
T ss_pred C-ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH-----------H-HHHHHHcCCCCCCC
Confidence 1 2234589999999998754 4899999999999999999999998643211 1 11111111 2222
Q ss_pred -hHHHHHHHHHHHccCCCCCCCC----CHHHHHHH
Q 039817 677 -TKFERITMVGLWCICPQPTLRP----SMKQVLQM 706 (725)
Q Consensus 677 -~~~~~l~~l~~~cl~~dp~~RP----s~~evl~~ 706 (725)
...+.+.+++.+||+.||++|| ++.+++++
T Consensus 219 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 219 NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 3467888999999999999998 56777664
No 206
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97 E-value=6.2e-31 Score=286.32 Aligned_cols=240 Identities=21% Similarity=0.217 Sum_probs=182.7
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..|++|++|.+..+ +..+|+|.+.... ......+.+|++++++++|+||+++++.+.+++..++||||+++|+|.
T Consensus 12 G~~g~Vy~a~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~ 89 (382)
T cd05625 12 GAFGEVCLARKVDT--KALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMM 89 (382)
T ss_pred CCCEEEEEEEECCC--CCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHH
Confidence 44556666655433 4578889886432 233457889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC----
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ---- 598 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~---- 598 (725)
+++.+.+.+++.....++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++..+....
T Consensus 90 ~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~-------~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 90 SLLIRMGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDR-------DGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC-------CCCEEEeECCCCccccccccccc
Confidence 9998888889999999999999999999999 9999999999999987 7899999999975321000
Q ss_pred ------------------------------------------CccccccccCccccchhcccCCCCCCccceehhHHHHH
Q 039817 599 ------------------------------------------TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLL 636 (725)
Q Consensus 599 ------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ 636 (725)
........||+.|+|||.+.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 00011245899999999999999999999999999999
Q ss_pred HHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCC--hhHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 039817 637 EIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG--ATKFERITMVGLWCICPQPTLRPS---MKQVLQM 706 (725)
Q Consensus 637 elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~cl~~dp~~RPs---~~evl~~ 706 (725)
||++|+.||....... ....+.........+ ....+.+.+++.+++ .+|++|++ +.|+++|
T Consensus 240 elltG~~Pf~~~~~~~--------~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 240 EMLVGQPPFLAQTPLE--------TQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHhCCCCCCCCCHHH--------HHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 9999999997542211 000000000011111 234566777777765 59999987 8888765
No 207
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.97 E-value=2.8e-30 Score=264.91 Aligned_cols=237 Identities=27% Similarity=0.406 Sum_probs=186.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
.++.++++... .+..+++|.+... ......|.+|++++++++|+|++++++++......++||||+++++|.+++.
T Consensus 16 ~~g~v~~~~~~---~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~ 91 (256)
T cd05112 16 QFGLVWLGYWL---EKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLR 91 (256)
T ss_pred ccceEEEEEEe---CCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHH
Confidence 34555555432 2346889988643 3345679999999999999999999999999999999999999999999997
Q ss_pred cC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 527 RQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 527 ~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
.. ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++..............
T Consensus 92 ~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~-------~~~~~l~d~g~~~~~~~~~~~~~~~~ 161 (256)
T cd05112 92 AQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGE-------NQVVKVSDFGMTRFVLDDQYTSSTGT 161 (256)
T ss_pred hCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcC-------CCeEEECCCcceeecccCcccccCCC
Confidence 64 4679999999999999999999998 9999999999999987 77899999999886543322222222
Q ss_pred ccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhHHHHH
Q 039817 606 RGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATKFERI 682 (725)
Q Consensus 606 ~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 682 (725)
.++.+|+|||.+.+..++.++||||||+++|||++ |+.|+..... .+....... ....+...++.+
T Consensus 162 ~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 230 (256)
T cd05112 162 KFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-----------SEVVETINAGFRLYKPRLASQSV 230 (256)
T ss_pred ccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-----------HHHHHHHhCCCCCCCCCCCCHHH
Confidence 35678999999998889999999999999999998 8887753221 111111111 111223356789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
.+++.+||+.+|++|||+.+++++|.
T Consensus 231 ~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 231 YELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHHHHHcccChhhCCCHHHHHHhhC
Confidence 99999999999999999999999873
No 208
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=1.7e-30 Score=276.02 Aligned_cols=238 Identities=24% Similarity=0.263 Sum_probs=186.4
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.+|++|+.|.+..+ +..||+|.+... .....+.+..|.+++..+. |++|+++++++...+..++||||+++|+|
T Consensus 11 G~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L 88 (323)
T cd05615 11 GSFGKVMLAERKGT--DELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL 88 (323)
T ss_pred cCCeEEEEEEECCC--CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcH
Confidence 45566666655443 457899987642 2334456888999998875 67888999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++.+...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....... .
T Consensus 89 ~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~-------~~~ikL~Dfg~~~~~~~~~~-~ 157 (323)
T cd05615 89 MYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDS-------EGHIKIADFGMCKEHMVDGV-T 157 (323)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECC-------CCCEEEeccccccccCCCCc-c
Confidence 99998888899999999999999999999999 9999999999999987 78899999999875432221 1
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.|+...... ...+.+. ......+......
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~--~~~~~~p~~~~~~ 227 (323)
T cd05615 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--------ELFQSIM--EHNVSYPKSLSKE 227 (323)
T ss_pred ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHH--hCCCCCCccCCHH
Confidence 22345899999999999999999999999999999999999998643211 0111111 1122344556778
Q ss_pred HHHHHHHccCCCCCCCCCH-----HHHHHH
Q 039817 682 ITMVGLWCICPQPTLRPSM-----KQVLQM 706 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~-----~evl~~ 706 (725)
+.+++.+|++.+|.+|++. +++.++
T Consensus 228 ~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 228 AVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred HHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 8999999999999999974 455544
No 209
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=3.6e-31 Score=277.91 Aligned_cols=240 Identities=20% Similarity=0.279 Sum_probs=188.9
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
..+|+.++.+.+..++ ..|++|.+........+.+.+|+.+++.++||||+++++++..++..++|+||+++++|.++
T Consensus 31 ~g~~g~v~~~~~~~~~--~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~ 108 (297)
T cd06659 31 EGSTGIVCIAREKHSG--RQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDI 108 (297)
T ss_pred CCCceeEEEEEEcCCC--CEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHH
Confidence 3455666666655443 47888887655555567789999999999999999999999999999999999999999987
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
+.. ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++......... ...
T Consensus 109 ~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~-------~~~~kL~dfg~~~~~~~~~~~-~~~ 176 (297)
T cd06659 109 VSQ-TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTL-------DGRVKLSDFGFCAQISKDVPK-RKS 176 (297)
T ss_pred Hhh-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEcc-------CCcEEEeechhHhhccccccc-ccc
Confidence 744 5689999999999999999999999 9999999999999987 789999999998755433221 123
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH-HcCCCChhHHHHHH
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV-RTGNLGATKFERIT 683 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 683 (725)
..++..|+|||++.+..++.++||||||++++||++|+.|+....... ......... ..........+.+.
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~ 248 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--------AMKRLRDSPPPKLKNAHKISPVLR 248 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhccCCCCccccCCCCHHHH
Confidence 458889999999998889999999999999999999999986432111 000000000 00011223456789
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 039817 684 MVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 684 ~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+++.+|++.+|++||++++++++
T Consensus 249 ~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 249 DFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHhcCCcccCcCHHHHhhC
Confidence 99999999999999999999985
No 210
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=1.2e-30 Score=276.59 Aligned_cols=255 Identities=22% Similarity=0.255 Sum_probs=183.9
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEc--CCceeeeeecccCCC
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE--QNHQLLVYELMKNGT 520 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~e~~~~gs 520 (725)
+...+|+++++|+..-......||+|.+... .....+.+|++++++++||||+++++++.. +...++|+||+++ +
T Consensus 9 lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~ 85 (317)
T cd07867 9 VGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-D 85 (317)
T ss_pred eccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-c
Confidence 3455678888887655556678999988643 234568899999999999999999999854 5578899999885 6
Q ss_pred hhhhhccC---------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCc
Q 039817 521 LSAFLFRQ---------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLA 591 (725)
Q Consensus 521 L~~~l~~~---------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla 591 (725)
|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||++..+. +.++.+||+|||++
T Consensus 86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~---~~~~~~kl~DfG~a 159 (317)
T cd07867 86 LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEG---PERGRVKIADMGFA 159 (317)
T ss_pred HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCC---CCCCcEEEeeccce
Confidence 76666321 2478899999999999999999999 999999999999995321 12678999999999
Q ss_pred cccCcCCCc--cccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccC--cch-----
Q 039817 592 KLLKKDQTR--TSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANG--MIL----- 661 (725)
Q Consensus 592 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~--~~~----- 661 (725)
+........ ......+|..|+|||.+.+ ..++.++||||||+++|||++|+.||.....+....... ..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS 239 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence 876543221 1223458899999999876 457899999999999999999999986543221100000 000
Q ss_pred -------HHHH-----------HHHHHcCC------------CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 662 -------TDWV-----------LYCVRTGN------------LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 662 -------~~~~-----------~~~~~~~~------------~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..|. ........ ........+.+++.+|++.||.+|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 240 VMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred hcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000 00000000 001123457889999999999999999999874
No 211
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.97 E-value=2.3e-30 Score=264.79 Aligned_cols=241 Identities=25% Similarity=0.361 Sum_probs=186.9
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCc-cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.++.++.+.+.- +..|++|.+...... ..+.|.+|++++++++|+||+++++++......++||||+++++|.+++
T Consensus 7 ~~g~v~~~~~~~---~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l 83 (251)
T cd05041 7 NFGDVYKGVLKG---NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFL 83 (251)
T ss_pred CCceEEEEEEeC---CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHH
Confidence 344455554322 567889987654333 5568999999999999999999999999999999999999999999999
Q ss_pred ccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc-c
Q 039817 526 FRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS-T 603 (725)
Q Consensus 526 ~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~-~ 603 (725)
.+. ..+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||++........... .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~-------~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 84 RKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGE-------NNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcC-------CCcEEEeeccccccccCCcceeccc
Confidence 654 5678999999999999999999999 9999999999999987 78899999999986542221111 1
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERI 682 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 682 (725)
....+..|+|||.+.+..++.++||||||++++||++ |..|+...... .....+... .....+...+..+
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~ 224 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--------QTRERIESG-YRMPAPQLCPEEI 224 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--------HHHHHHhcC-CCCCCCccCCHHH
Confidence 1223567999999988899999999999999999999 66666433211 011111110 0112334556789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
.+++.+|++.+|++|||+.||++.|++
T Consensus 225 ~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 225 YRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred HHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 999999999999999999999999863
No 212
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=1.7e-30 Score=270.34 Aligned_cols=237 Identities=22% Similarity=0.342 Sum_probs=183.6
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.++.++++.+..+ +..+|+|.+... .....++|.+|++++++++||||+++++++...+..++||||+++++|..+.
T Consensus 13 ~~~~v~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 90 (279)
T cd06619 13 NGGTVYKAYHLLT--RRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR 90 (279)
T ss_pred CCeEEEEEEEcCC--CcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh
Confidence 3445555554433 356888877543 2334567999999999999999999999999999999999999999997653
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 526 FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 526 ~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
.+++..+..++.|++.||.|||+. +|+|+||||+||+++. ++.+||+|||++....... ....
T Consensus 91 ----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~-------~~~~~l~dfg~~~~~~~~~---~~~~ 153 (279)
T cd06619 91 ----KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNT-------RGQVKLCDFGVSTQLVNSI---AKTY 153 (279)
T ss_pred ----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECC-------CCCEEEeeCCcceeccccc---ccCC
Confidence 467888999999999999999999 9999999999999987 7899999999998654322 1224
Q ss_pred ccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC---CC-ChhHHHH
Q 039817 606 RGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG---NL-GATKFER 681 (725)
Q Consensus 606 ~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~ 681 (725)
.++..|+|||.+.+..++.++||||||+++|||++|+.|+........ ....... ....... .. .....+.
T Consensus 154 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 228 (279)
T cd06619 154 VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQG----SLMPLQL-LQCIVDEDPPVLPVGQFSEK 228 (279)
T ss_pred CCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccc----ccchHHH-HHHHhccCCCCCCCCcCCHH
Confidence 588899999999998999999999999999999999999865332211 0111111 1111111 11 1235568
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
+.+++.+|++.+|++||+++|++++-
T Consensus 229 ~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 229 FVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred HHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 89999999999999999999998763
No 213
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=1.7e-30 Score=269.94 Aligned_cols=236 Identities=23% Similarity=0.298 Sum_probs=184.9
Q ss_pred HHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
++.++++.+.. .+..|++|.+.... ....+.+.+|++++++++|+||+++++++..++..++||||+++++|.+++.
T Consensus 17 ~~~vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 94 (277)
T cd06642 17 FGEVYKGIDNR--TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLK 94 (277)
T ss_pred CeeEEEEEEcC--CCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhh
Confidence 33444444332 34578889876432 3345678999999999999999999999999999999999999999999885
Q ss_pred cCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccc
Q 039817 527 RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIR 606 (725)
Q Consensus 527 ~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 606 (725)
. ..+++..+..++.|+++||.|||+. +++|+||+|+||+++. ++.+||+|||++........ ......
T Consensus 95 ~-~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~-------~~~~~l~dfg~~~~~~~~~~-~~~~~~ 162 (277)
T cd06642 95 P-GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSE-------QGDVKLADFGVAGQLTDTQI-KRNTFV 162 (277)
T ss_pred c-CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeC-------CCCEEEccccccccccCcch-hhhccc
Confidence 4 5688999999999999999999998 9999999999999987 78899999999986543321 112234
Q ss_pred cCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHH
Q 039817 607 GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVG 686 (725)
Q Consensus 607 gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 686 (725)
++..|+|||.+.+..++.++||||||++++||++|+.|+....... ....... ..........+..+.+++
T Consensus 163 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~li 233 (277)
T cd06642 163 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--------VLFLIPK-NSPPTLEGQYSKPFKEFV 233 (277)
T ss_pred CcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--------HHhhhhc-CCCCCCCcccCHHHHHHH
Confidence 7889999999998899999999999999999999999876432111 0000000 001122234567789999
Q ss_pred HHccCCCCCCCCCHHHHHHH
Q 039817 687 LWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 687 ~~cl~~dp~~RPs~~evl~~ 706 (725)
.+|++.+|.+||++.+|+++
T Consensus 234 ~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 234 EACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHHccCCcccCcCHHHHHHh
Confidence 99999999999999999985
No 214
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=3.6e-30 Score=264.95 Aligned_cols=239 Identities=23% Similarity=0.265 Sum_probs=187.2
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhcc
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR 527 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~ 527 (725)
+++++.+.+..++ ..+++|.+........+.+.+|++++++++|+||+++++++..++..+++|||+++++|.+++..
T Consensus 16 ~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~ 93 (262)
T cd06613 16 YGDVYKARDIATG--ELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQV 93 (262)
T ss_pred ceEEEEeEecCCC--CEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence 4444444443333 46788887655555678899999999999999999999999999999999999999999999977
Q ss_pred C-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccc
Q 039817 528 Q-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIR 606 (725)
Q Consensus 528 ~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 606 (725)
. ..++...+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++........ ......
T Consensus 94 ~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~-------~~~~~l~d~g~~~~~~~~~~-~~~~~~ 162 (262)
T cd06613 94 TRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTE-------DGDVKLADFGVSAQLTATIA-KRKSFI 162 (262)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECC-------CCCEEECccccchhhhhhhh-cccccc
Confidence 6 7889999999999999999999998 9999999999999987 78899999999886543221 112345
Q ss_pred cCccccchhcccCC---CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCChhHHHH
Q 039817 607 GTMGYMAPEWLRNA---PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGATKFER 681 (725)
Q Consensus 607 gt~~y~aPE~~~~~---~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 681 (725)
++..|+|||.+.+. .++.++||||||++++||++|+.|+........ ........... .......+..
T Consensus 163 ~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 235 (262)
T cd06613 163 GTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-------LFLISKSNFPPPKLKDKEKWSPV 235 (262)
T ss_pred CCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhccCCCccccchhhhhHH
Confidence 78889999998776 889999999999999999999999864321110 00000000000 0112244678
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+.+++.+||+.+|.+|||+++|+.+
T Consensus 236 ~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 236 FHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcC
Confidence 9999999999999999999999864
No 215
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.97 E-value=8e-31 Score=256.97 Aligned_cols=241 Identities=24% Similarity=0.265 Sum_probs=189.3
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCcc--HHHHHHHHHHHhccCcCCccceeeEEEc--CCceeeeeecccCC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDG--EKSFLREVQVIGRTHHKNLVQLLGFCIE--QNHQLLVYELMKNG 519 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~--~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~e~~~~g 519 (725)
...+|+.|++|.+..++ ..||+|+++-..... --.-++|+.+|.+++|||||.+-.+... -+..|||||||+.
T Consensus 85 ~EGtyGiVYRakdk~t~--eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh- 161 (419)
T KOG0663|consen 85 EEGTYGVVYRAKDKKTD--EIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH- 161 (419)
T ss_pred ccCcceeEEEeccCCcc--eeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-
Confidence 45688889988887665 578999986432111 1235799999999999999999998764 4579999999998
Q ss_pred ChhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 520 TLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 520 sL~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
+|...+..- +++...++.-+..|+++|++|||.. .|+|||||++|+|+.. .|.+||+|||||+.++...
T Consensus 162 DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~-------~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 162 DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSH-------KGILKIADFGLAREYGSPL 231 (419)
T ss_pred hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeecc-------CCcEEecccchhhhhcCCc
Confidence 888888766 4789999999999999999999999 9999999999999988 8999999999999987653
Q ss_pred CccccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-------
Q 039817 599 TRTSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR------- 670 (725)
Q Consensus 599 ~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 670 (725)
. ..+..+-|.-|+|||.+.+. .|+.+.|+||+||++.|++++++.+.....-++ .+.+...+.
T Consensus 232 k-~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQ--------l~~If~llGtPte~iw 302 (419)
T KOG0663|consen 232 K-PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQ--------LDKIFKLLGTPSEAIW 302 (419)
T ss_pred c-cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHH--------HHHHHHHhCCCccccC
Confidence 2 34445678999999998765 699999999999999999999998865432211 000111000
Q ss_pred ----------------------cCCCChh-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 671 ----------------------TGNLGAT-KFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 671 ----------------------~~~~~~~-~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...+... ..+.-.+|+..++..||.+|.|++|.+++
T Consensus 303 pg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 303 PGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred CCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 0111111 34667788999999999999999999876
No 216
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=5.5e-31 Score=271.75 Aligned_cols=240 Identities=26% Similarity=0.285 Sum_probs=187.8
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccC------ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCC
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTG------DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 519 (725)
.+|++++++.+ .++..+|||.++.... ...+.+.+|++++++++|+||+++++++.+.+..++||||++++
T Consensus 11 g~~~~v~~~~~---~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (265)
T cd06631 11 GAYGTVYCGLT---NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGG 87 (265)
T ss_pred cCCeEEEEEEE---cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCC
Confidence 44556666543 2345788888753221 12356889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC-
Q 039817 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ- 598 (725)
Q Consensus 520 sL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~- 598 (725)
+|.+++.+...+++..+..++.|++.||+|||+. +++|+||+|+||+++. ++.+||+|||++.......
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~-------~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 88 SISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMP-------NGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECC-------CCeEEeccchhhHhhhhccc
Confidence 9999998877889999999999999999999998 9999999999999987 7899999999987543211
Q ss_pred ----CccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHH-HHcCC
Q 039817 599 ----TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYC-VRTGN 673 (725)
Q Consensus 599 ----~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 673 (725)
........++..|+|||.+.+..++.++||||||++++||++|+.|+....... ........ .....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~ 229 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA--------AMFYIGAHRGLMPR 229 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH--------HHHHhhhccCCCCC
Confidence 111122458889999999998889999999999999999999999986432111 00000000 01123
Q ss_pred CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 674 LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 674 ~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+....+.+.+++.+||+.+|.+||++.|++++
T Consensus 230 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 230 LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 444567789999999999999999999999864
No 217
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.97 E-value=1.6e-30 Score=266.86 Aligned_cols=236 Identities=26% Similarity=0.356 Sum_probs=186.0
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEc-CCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~e~~~~gsL~~ 523 (725)
.++.++.+.+..+ +..+++|.+... .....+.+.+|++++++++|+|++++++.+.. ....++||||+++++|.+
T Consensus 12 ~~~~v~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~ 89 (257)
T cd08223 12 SYGEVSLVRHRTD--GKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYH 89 (257)
T ss_pred CCeEEEEEEEcCC--CcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHH
Confidence 4555555555443 346888887532 23345678999999999999999999998765 446789999999999999
Q ss_pred hhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 524 FLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 524 ~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
++... ..+++.++..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++........ .
T Consensus 90 ~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~-------~~~~~l~df~~~~~~~~~~~-~ 158 (257)
T cd08223 90 KLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTR-------TNIIKVGDLGIARVLENQCD-M 158 (257)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEec-------CCcEEEecccceEEecccCC-c
Confidence 99753 4589999999999999999999999 9999999999999987 78999999999986643322 2
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATKF 679 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 679 (725)
.....++..|+|||.+.+..++.++||||||++++||++|+.|+..... ......... ....+....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 227 (257)
T cd08223 159 ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----------NSLVYRIIEGKLPPMPKDYS 227 (257)
T ss_pred cccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----------HHHHHHHHhcCCCCCccccC
Confidence 2234578899999999999999999999999999999999998763221 111111111 112344567
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+.+.+++.+|++.+|++||++.+++++
T Consensus 228 ~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 228 PELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 889999999999999999999999875
No 218
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=5.2e-31 Score=274.28 Aligned_cols=235 Identities=21% Similarity=0.295 Sum_probs=187.0
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
.+++++.+.... .+..+++|.+........+.|.+|++++++++|+||+++++.+..+...++||||+++++|.+++.
T Consensus 17 ~~~~v~~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 94 (280)
T cd06611 17 AFGKVYKAQHKE--TGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIML 94 (280)
T ss_pred CCceEEEEEEcC--CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHH
Confidence 445555555443 346789998876555566789999999999999999999999999999999999999999999987
Q ss_pred cC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 527 RQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 527 ~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
+. ..+++..+..++.|++.||.|||+. +|+|+||+|+||+++. ++.+||+|||++........ .....
T Consensus 95 ~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~-------~~~~~l~d~g~~~~~~~~~~-~~~~~ 163 (280)
T cd06611 95 ELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTL-------DGDVKLADFGVSAKNKSTLQ-KRDTF 163 (280)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECC-------CCCEEEccCccchhhccccc-cccee
Confidence 64 5689999999999999999999999 9999999999999987 78999999999876533222 12234
Q ss_pred ccCccccchhccc-----CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCC-----CC
Q 039817 606 RGTMGYMAPEWLR-----NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGN-----LG 675 (725)
Q Consensus 606 ~gt~~y~aPE~~~-----~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 675 (725)
.++..|+|||.+. ...++.++||||||+++|||++|+.|+...... ...... .... .+
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-----------~~~~~~-~~~~~~~~~~~ 231 (280)
T cd06611 164 IGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-----------RVLLKI-LKSEPPTLDQP 231 (280)
T ss_pred ecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-----------HHHHHH-hcCCCCCcCCc
Confidence 5888999999874 345778999999999999999999998643211 111111 1111 12
Q ss_pred hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 676 ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 676 ~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
......+.+++..||+.+|.+||++.+++++
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 232 SKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 2345688999999999999999999999876
No 219
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=1.4e-30 Score=267.15 Aligned_cols=236 Identities=24% Similarity=0.377 Sum_probs=187.2
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.+++++.+.+.. .+..+++|.+... .....+.+.+|++++++++|+||+++++.+..++..++||||+++++|.++
T Consensus 12 ~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 89 (256)
T cd08220 12 AFGIVHLCRRKA--DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEY 89 (256)
T ss_pred CceEEEEEEEcC--CCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHH
Confidence 344455555443 3456788877532 334466899999999999999999999999999999999999999999999
Q ss_pred hccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 525 LFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 525 l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.+ +..+||+|||++........ .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~------~~~~~l~d~~~~~~~~~~~~--~ 158 (256)
T cd08220 90 IQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKH------KMVVKIGDFGISKILSSKSK--A 158 (256)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC------CCEEEEccCCCceecCCCcc--c
Confidence 9764 3579999999999999999999999 99999999999999753 55789999999987644322 1
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATKFE 680 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 680 (725)
....++..|+|||.+.+..++.++||||||+++++|++|+.|+...... ........ ....+.....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 227 (256)
T cd08220 159 YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-----------ALVLKIMSGTFAPISDRYSP 227 (256)
T ss_pred cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-----------HHHHHHHhcCCCCCCCCcCH
Confidence 2244788999999999888999999999999999999999988643211 11111111 1223344677
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 681 RITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+.+++.+||+.+|.+|||+.|++++
T Consensus 228 ~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 228 DLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhhC
Confidence 89999999999999999999999875
No 220
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-30 Score=277.10 Aligned_cols=239 Identities=26% Similarity=0.273 Sum_probs=196.5
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCc---cHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccCCC
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGD---GEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~---~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
...|+.++.+....+ +..+|+|.+.+.... ..+.+.+|+++|+++. |||||.+.+.++.....++|||++.+|.
T Consensus 45 ~G~Fg~v~~~~~~~t--g~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGe 122 (382)
T KOG0032|consen 45 RGQFGVVYLCREKST--GKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGE 122 (382)
T ss_pred CCCceEEEEEEecCC--CceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCch
Confidence 344555555655555 456788887654332 3468999999999998 9999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|.+.+.+. .+++.....++.|++.++.|||+. +|+||||||+|+|+.... ++++.+|++|||++..... ..
T Consensus 123 Lfd~i~~~-~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~---~~~~~ik~~DFGla~~~~~--~~ 193 (382)
T KOG0032|consen 123 LFDRIVKK-HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKD---EGSGRIKLIDFGLAKFIKP--GE 193 (382)
T ss_pred HHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeecccc---CCCCcEEEeeCCCceEccC--Cc
Confidence 99999777 499999999999999999999998 999999999999997742 1246899999999998766 33
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC------
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL------ 674 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 674 (725)
.....+||+.|+|||.+....|+.+.||||+|+++|.|++|..||......... .....+.+
T Consensus 194 ~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~------------~~i~~~~~~f~~~~ 261 (382)
T KOG0032|consen 194 RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF------------LAILRGDFDFTSEP 261 (382)
T ss_pred eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH------------HHHHcCCCCCCCCC
Confidence 445577999999999999999999999999999999999999999866432211 01122221
Q ss_pred ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 675 GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 675 ~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
-....+.+.+++..++..||.+|+|+.++++|
T Consensus 262 w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 262 WDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 12457889999999999999999999999997
No 221
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=1.2e-30 Score=267.58 Aligned_cols=237 Identities=23% Similarity=0.273 Sum_probs=185.3
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhcc
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR 527 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~ 527 (725)
+++++.+.... .+..+++|.+..... .+++.+|++++++++|+||+++++++..+...++++||+++++|.+++..
T Consensus 16 ~~~v~~~~~~~--~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~ 91 (256)
T cd06612 16 YGSVYKAIHKE--TGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKI 91 (256)
T ss_pred CeEEEEEEEcC--CCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHh
Confidence 33444444332 245788888864322 67899999999999999999999999999999999999999999999975
Q ss_pred C-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccc
Q 039817 528 Q-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIR 606 (725)
Q Consensus 528 ~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 606 (725)
. ..+++..+..++.|+++||.|||+. +++|+||+|+||+++. ++.+||+|||++........ ......
T Consensus 92 ~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~-------~~~~~l~dfg~~~~~~~~~~-~~~~~~ 160 (256)
T cd06612 92 TNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNE-------EGQAKLADFGVSGQLTDTMA-KRNTVI 160 (256)
T ss_pred CccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECC-------CCcEEEcccccchhcccCcc-cccccc
Confidence 3 5789999999999999999999999 9999999999999987 78899999999987654322 122234
Q ss_pred cCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHH
Q 039817 607 GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVG 686 (725)
Q Consensus 607 gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 686 (725)
++..|+|||.+.+..++.++||||||++++||++|+.|+........... ...........+......+.+++
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i 233 (256)
T cd06612 161 GTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM-------IPNKPPPTLSDPEKWSPEFNDFV 233 (256)
T ss_pred CCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh-------hccCCCCCCCchhhcCHHHHHHH
Confidence 78899999999988999999999999999999999999864322110000 00000000011223456789999
Q ss_pred HHccCCCCCCCCCHHHHHHH
Q 039817 687 LWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 687 ~~cl~~dp~~RPs~~evl~~ 706 (725)
.+|++.+|++|||++||+++
T Consensus 234 ~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 234 KKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred HHHHhcChhhCcCHHHHhcC
Confidence 99999999999999999874
No 222
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=3.5e-30 Score=265.04 Aligned_cols=241 Identities=24% Similarity=0.357 Sum_probs=186.7
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
..+++.++.++.. ....+++|.+... ....+.|.+|++++++++|+||+++.+++.. ...+++|||+++++|.++
T Consensus 16 ~g~~~~vy~~~~~---~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~ 90 (260)
T cd05073 16 AGQFGEVWMATYN---KHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF 90 (260)
T ss_pred CccceEEEEEEec---CCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHH
Confidence 3445556655422 2345888887643 2345679999999999999999999999887 778999999999999999
Q ss_pred hccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 525 LFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 525 l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+.+. ..+++..+..++.|++.||.|||+. +++|+||||+||+++. .+.+||+|||++...........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~-------~~~~~l~d~~~~~~~~~~~~~~~ 160 (260)
T cd05073 91 LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSA-------SLVCKIADFGLARVIEDNEYTAR 160 (260)
T ss_pred HHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcC-------CCcEEECCCcceeeccCCCcccc
Confidence 9764 4578899999999999999999998 9999999999999987 78999999999986543322222
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
....++..|+|||++....++.++|+||||++++|+++ |+.|+...... .......... ....+...+..
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~ 231 (260)
T cd05073 161 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--------EVIRALERGY-RMPRPENCPEE 231 (260)
T ss_pred cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHhCCC-CCCCcccCCHH
Confidence 22335678999999998889999999999999999999 78777532211 0111111000 01223345678
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
+.+++.+|++.+|++||++.++.+.|+.
T Consensus 232 ~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 232 LYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999999999999975
No 223
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=2.6e-31 Score=273.07 Aligned_cols=243 Identities=29% Similarity=0.417 Sum_probs=187.0
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCccH--HHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGE--KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~--~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.|+.++++.+..+ +..+|+|.+........ ....+|+.++++++|+||+++++++......++|||++++++|.++
T Consensus 11 ~~g~v~~~~~~~~--~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~ 88 (260)
T PF00069_consen 11 GFGTVYKAKNKKN--GQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDY 88 (260)
T ss_dssp SSEEEEEEEETTT--TEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHH
T ss_pred CCEEEEEEEECCC--CeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 3444444544443 34788888865433322 2345699999999999999999999999999999999999999999
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
+.....+++..+..++.|+++||.|||+. +++|+||||+||+++. ++.++|+|||.+..... .......
T Consensus 89 l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~-------~~~~~l~Dfg~~~~~~~-~~~~~~~ 157 (260)
T PF00069_consen 89 LQKNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDE-------NGEVKLIDFGSSVKLSE-NNENFNP 157 (260)
T ss_dssp HHHHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEEST-------TSEEEESSGTTTEESTS-TTSEBSS
T ss_pred ccccccccccccccccccccccccccccc---cccccccccccccccc-------ccccccccccccccccc-ccccccc
Confidence 98778899999999999999999999999 9999999999999987 88999999999976421 1222334
Q ss_pred cccCccccchhccc-CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHH-HHHHcCCCChhHHHHH
Q 039817 605 IRGTMGYMAPEWLR-NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVL-YCVRTGNLGATKFERI 682 (725)
Q Consensus 605 ~~gt~~y~aPE~~~-~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 682 (725)
..++..|+|||.+. +...+.++||||+|+++++|++|+.|+........ ......... .............+.+
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQ----LEIIEKILKRPLPSSSQQSREKSEEL 233 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHH----HHHHHHHHHTHHHHHTTSHTTSHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhh----hhhhhhcccccccccccccchhHHHH
Confidence 55888999999998 88899999999999999999999999875411110 001111111 1111111111224899
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+++.+||+.||++||++.+++++
T Consensus 234 ~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 234 RDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred HHHHHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999999864
No 224
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=2.3e-30 Score=267.40 Aligned_cols=244 Identities=28% Similarity=0.405 Sum_probs=188.3
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc------CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT------GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
.++.++.+.+..++ ..+++|.+.... ....+.+.+|++++++++|+||+++++++.+++..++||||+++++
T Consensus 12 ~~~~v~~~~~~~~~--~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~ 89 (268)
T cd06630 12 AFSSCYQARDVKTG--TLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGS 89 (268)
T ss_pred CceEEEEEEEcCCC--cEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCc
Confidence 44555555544333 467777775322 1134678999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|.+++.+...+++..+..++.|++.||.|||+. +++|+||+|+||+++.+ ...+||+|||++.........
T Consensus 90 L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~------~~~~~l~dfg~~~~~~~~~~~ 160 (268)
T cd06630 90 VSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDST------GQRLRIADFGAAARLAAKGTG 160 (268)
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC------CCEEEEccccccccccccccc
Confidence 999998878899999999999999999999999 99999999999999762 346999999998866543211
Q ss_pred c---ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChh
Q 039817 601 T---STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGAT 677 (725)
Q Consensus 601 ~---~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (725)
. .....++..|+|||.+.+..++.++||||+|++++||++|..|+....... .................+..
T Consensus 161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 235 (268)
T cd06630 161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN-----HLALIFKIASATTAPSIPEH 235 (268)
T ss_pred CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc-----hHHHHHHHhccCCCCCCchh
Confidence 1 112357889999999988889999999999999999999999886432111 00000000011112334445
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 678 KFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..+.+.+++.+|++.+|.+||++.+++++
T Consensus 236 ~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 236 LSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred hCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 67889999999999999999999999864
No 225
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=8.7e-31 Score=283.26 Aligned_cols=239 Identities=19% Similarity=0.186 Sum_probs=184.3
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..+|+.++.+.+..+ +..+|+|.+... .....+.+.+|+.+++.++||||+++++.+..++..++||||+++|+|
T Consensus 53 ~G~fg~Vy~~~~~~~--~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L 130 (371)
T cd05622 53 RGAFGEVQLVRHKST--RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL 130 (371)
T ss_pred ecCCeEEEEEEECCC--CcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcH
Confidence 345566666655443 356788887532 223345688999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++... .++...+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.........
T Consensus 131 ~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~-------~~~ikL~DfG~a~~~~~~~~~~ 199 (371)
T cd05622 131 VNLMSNY-DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDK-------SGHLKLADFGTCMKMNKEGMVR 199 (371)
T ss_pred HHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECC-------CCCEEEEeCCceeEcCcCCccc
Confidence 9998654 578888999999999999999999 9999999999999987 7899999999998765433322
Q ss_pred ccccccCccccchhcccCC----CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc---CCC
Q 039817 602 STMIRGTMGYMAPEWLRNA----PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT---GNL 674 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~----~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 674 (725)
.....||+.|+|||.+.+. .++.++||||||+++|||++|+.||...... ......... ...
T Consensus 200 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-----------~~~~~i~~~~~~~~~ 268 (371)
T cd05622 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-----------GTYSKIMNHKNSLTF 268 (371)
T ss_pred ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH-----------HHHHHHHcCCCcccC
Confidence 3345699999999998754 3789999999999999999999999743211 111111111 111
Q ss_pred C--hhHHHHHHHHHHHccCCCCCC--CCCHHHHHHHh
Q 039817 675 G--ATKFERITMVGLWCICPQPTL--RPSMKQVLQML 707 (725)
Q Consensus 675 ~--~~~~~~l~~l~~~cl~~dp~~--RPs~~evl~~L 707 (725)
+ ......+.+++.+|++.++.+ ||+++|++++.
T Consensus 269 ~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 269 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 2 245678899999999855543 78999999874
No 226
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=1.2e-30 Score=278.06 Aligned_cols=247 Identities=17% Similarity=0.177 Sum_probs=178.8
Q ss_pred HHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
+.+++.+.+.- .+..||+|.+.... ....+.+.+|+++++.++||||+++++++..++..++||||+++|+|.+++
T Consensus 13 ~~~v~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 90 (327)
T cd08227 13 LMTVNLARYKP--TGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLI 90 (327)
T ss_pred eEEEEEEeecc--cCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHH
Confidence 34444444443 34678999886432 233456778999999999999999999999999999999999999999999
Q ss_pred ccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc--
Q 039817 526 FRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT-- 601 (725)
Q Consensus 526 ~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~-- 601 (725)
... ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+++.||+............
T Consensus 91 ~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~-------~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 91 CTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISV-------DGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred HhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEec-------CCcEEEcccchhhccccccccccc
Confidence 653 4589999999999999999999998 9999999999999987 7789999998654332111100
Q ss_pred ----ccccccCccccchhcccC--CCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccccc--Cc---------chHHH
Q 039817 602 ----STMIRGTMGYMAPEWLRN--APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN--GM---------ILTDW 664 (725)
Q Consensus 602 ----~~~~~gt~~y~aPE~~~~--~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~--~~---------~~~~~ 664 (725)
.....++..|+|||++.+ ..++.++||||||++++||++|+.|+............ .. ...+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence 111236678999999875 46899999999999999999999998642211000000 00 00000
Q ss_pred HHH-H-----------------H-------HcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 665 VLY-C-----------------V-------RTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 665 ~~~-~-----------------~-------~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
... . . ..........+.+.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 000 0 0 0000111335678999999999999999999999874
No 227
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=265.29 Aligned_cols=248 Identities=26% Similarity=0.340 Sum_probs=184.3
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhc--cCcCCccceeeEEEcCC----ceeeeeecccCCC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGR--THHKNLVQLLGFCIEQN----HQLLVYELMKNGT 520 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~lV~e~~~~gs 520 (725)
.|+||+++.. .+..||||.+.. .+++.+.+|.+++.. |+|+||+.+++.-..+. +++||.+|.++||
T Consensus 223 RyGEVwrG~w----rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GS 295 (513)
T KOG2052|consen 223 RFGEVWRGRW----RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGS 295 (513)
T ss_pred cccceeeccc----cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCc
Confidence 3455544432 245789999854 457889999999986 59999999999876543 6899999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcc-----cCCceeecCCccceEEeccCccccCCCCceEEeeccCccccC
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEE-----CETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLK 595 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~-----~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~ 595 (725)
|.|||.+ ..++.+..++++..+|.||+|||.+ .+|.|.|||||+.||||.. ++..-|+|+|||....
T Consensus 296 L~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKk-------n~~C~IADLGLAv~h~ 367 (513)
T KOG2052|consen 296 LYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-------NGTCCIADLGLAVRHD 367 (513)
T ss_pred HHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEcc-------CCcEEEeeceeeEEec
Confidence 9999977 6788999999999999999999965 5789999999999999987 8999999999998765
Q ss_pred cCCCcc---ccccccCccccchhcccCCC------CCCccceehhHHHHHHHHhCC----------cCCCCCCCCccccc
Q 039817 596 KDQTRT---STMIRGTMGYMAPEWLRNAP------VTAKVDVYSFGVMLLEIIFCK----------RHTELHRVDEPTLA 656 (725)
Q Consensus 596 ~~~~~~---~~~~~gt~~y~aPE~~~~~~------~~~ksDv~S~G~vl~elltg~----------~~~~~~~~~~~~~~ 656 (725)
.+.... ....+||.+|||||++.+.- --..+||||||.|+||+...- .||......++..+
T Consensus 368 ~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~e 447 (513)
T KOG2052|consen 368 SDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFE 447 (513)
T ss_pred ccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHH
Confidence 543221 22356999999999986542 123599999999999997421 23322222211111
Q ss_pred cCcchHHHHHHHHHcCCCC-----hhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 657 NGMILTDWVLYCVRTGNLG-----ATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
.+.+.+-....+..++ .+....+.++++.||..+|..|.|+--+.+.|.++.+
T Consensus 448 ---eMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 448 ---EMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred ---HHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 0111111111112222 2667789999999999999999999999999987765
No 228
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=3.3e-30 Score=267.35 Aligned_cols=237 Identities=23% Similarity=0.280 Sum_probs=187.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.++.++++.+.- .+..+++|.+.... ......+.+|++++++++|+||+++++++.++...++|+||+++++|.+++
T Consensus 13 ~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 90 (274)
T cd06609 13 SFGEVYKAIDKR--TNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLL 90 (274)
T ss_pred CCeEEEEEEECC--CCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHH
Confidence 344445554433 34678888875432 344567899999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 526 FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 526 ~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
... .+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.++|+|||+++....... .....
T Consensus 91 ~~~-~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~-------~~~~~l~d~g~~~~~~~~~~-~~~~~ 158 (274)
T cd06609 91 KPG-KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSE-------EGDVKLADFGVSGQLTSTMS-KRNTF 158 (274)
T ss_pred hhc-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECC-------CCCEEEcccccceeeccccc-ccccc
Confidence 765 789999999999999999999998 9999999999999987 78999999999987654322 12234
Q ss_pred ccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChh-HHHHHHH
Q 039817 606 RGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGAT-KFERITM 684 (725)
Q Consensus 606 ~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 684 (725)
.++..|+|||++.+..++.++||||||+++|||++|+.|+....... ....+... ....+... ..+.+.+
T Consensus 159 ~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~ 229 (274)
T cd06609 159 VGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--------VLFLIPKN-NPPSLEGNKFSKPFKD 229 (274)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--------HHHHhhhc-CCCCCcccccCHHHHH
Confidence 57888999999998889999999999999999999999986432110 00001100 01112222 5667899
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 039817 685 VGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 685 l~~~cl~~dp~~RPs~~evl~~ 706 (725)
++.+||+.+|++|||+++++++
T Consensus 230 ~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 230 FVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHHHHhhCChhhCcCHHHHhhC
Confidence 9999999999999999999875
No 229
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=1.2e-30 Score=300.06 Aligned_cols=247 Identities=21% Similarity=0.273 Sum_probs=186.2
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccc--ccCccHHHHHHHHHHHhccCcCCccceeeEEEc--CCceeeeeecccCCC
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEK--VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE--QNHQLLVYELMKNGT 520 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~e~~~~gs 520 (725)
...|++|+.+.+... +..+++|.+.. ........|..|+.++++++|||||++++++.. ....+|||||+++++
T Consensus 23 ~GgFGtVYLAkdk~t--g~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGS 100 (1021)
T PTZ00266 23 NGRFGEVFLVKHKRT--QEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGD 100 (1021)
T ss_pred cCCCeEEEEEEECCC--CeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCc
Confidence 345677777776544 35677777653 233345679999999999999999999998864 456899999999999
Q ss_pred hhhhhccC----CCCCHHHHHHHHHHHHHHhhhhhcccC----CceeecCCccceEEeccCcc----------ccCCCCc
Q 039817 521 LSAFLFRQ----EIPTWDKRVEIALGIARGLLYLHEECE----TQIIHCDIKPQNVLLDNNYI----------TIDNNYI 582 (725)
Q Consensus 521 L~~~l~~~----~~l~~~~~~~i~~qia~gL~yLH~~~~----~~ivH~dik~~NIll~~~~~----------~~~~~~~ 582 (725)
|.++|... ..+++..++.|+.||+.||.|||+... .+|+||||||+||||+.+.. ..+....
T Consensus 101 L~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~i 180 (1021)
T PTZ00266 101 LSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPI 180 (1021)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCc
Confidence 99998653 568999999999999999999998521 25999999999999975321 1123556
Q ss_pred eEEeeccCccccCcCCCccccccccCccccchhcccC--CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcc
Q 039817 583 TKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRN--APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMI 660 (725)
Q Consensus 583 ~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~ 660 (725)
+||+|||++........ .....||+.|+|||.+.+ ..++.++|||||||+||||++|+.||.....
T Consensus 181 VKLsDFGlAr~l~~~s~--~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~---------- 248 (1021)
T PTZ00266 181 AKIGDFGLSKNIGIESM--AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN---------- 248 (1021)
T ss_pred eEEccCCcccccccccc--ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc----------
Confidence 99999999986543322 123458999999999854 4588999999999999999999999864321
Q ss_pred hHHHHHHHHHcCCCC-hhHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 039817 661 LTDWVLYCVRTGNLG-ATKFERITMVGLWCICPQPTLRPSMKQVLQ 705 (725)
Q Consensus 661 ~~~~~~~~~~~~~~~-~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 705 (725)
....+........++ ......+.+|+..||+.+|.+||++.|++.
T Consensus 249 ~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 249 FSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 111122211112222 234678999999999999999999999984
No 230
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.97 E-value=4.5e-31 Score=274.63 Aligned_cols=245 Identities=22% Similarity=0.248 Sum_probs=196.9
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCC
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNG 519 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~g 519 (725)
+.+..||+|+.|.+.-+|+ .+|+|+|++.. ....+..+.|-.+|...+++.||+|+-.|++.+.+||||||++||
T Consensus 149 IgkGAfGeVrLarKk~Tg~--iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGG 226 (550)
T KOG0605|consen 149 IGKGAFGEVRLARKKDTGE--IYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGG 226 (550)
T ss_pred eccccceeEEEEEEccCCc--EEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCc
Confidence 4567788998888876664 78999987643 334567889999999999999999999999999999999999999
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc---
Q 039817 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK--- 596 (725)
Q Consensus 520 sL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~--- 596 (725)
++...|.+.+.|++....-++.+++.|+.-||+. ++|||||||+|+|||. .|.+||+||||+.-+..
T Consensus 227 D~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~-------~GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 227 DMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDA-------KGHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred cHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecC-------CCCEeeccccccchhhhhhh
Confidence 9999999999999999999999999999999999 9999999999999988 99999999999853211
Q ss_pred --------------------CCCc----cc-------------------cccccCccccchhcccCCCCCCccceehhHH
Q 039817 597 --------------------DQTR----TS-------------------TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGV 633 (725)
Q Consensus 597 --------------------~~~~----~~-------------------~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~ 633 (725)
+... .. ....||+.|+|||++.+..|....|.|||||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ 376 (550)
T KOG0605|consen 297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGC 376 (550)
T ss_pred hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHH
Confidence 0000 00 0134999999999999999999999999999
Q ss_pred HHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCC---CHHHHHHH
Q 039817 634 MLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRP---SMKQVLQM 706 (725)
Q Consensus 634 vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP---s~~evl~~ 706 (725)
|+||||.|-+||......+ ....+..|-..+ ..+-......+..+||.+|+. ||++|. .++||.+|
T Consensus 377 ImyEmLvGyPPF~s~tp~~----T~rkI~nwr~~l--~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 377 IMYEMLVGYPPFCSETPQE----TYRKIVNWRETL--KFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH 445 (550)
T ss_pred HHHHHHhCCCCCCCCCHHH----HHHHHHHHhhhc--cCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence 9999999999998665432 111222222111 112223445889999999998 999996 57777765
No 231
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=2.1e-30 Score=266.97 Aligned_cols=240 Identities=26% Similarity=0.349 Sum_probs=187.6
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC--ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG--DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
+++.++.+.+.. .+..+++|.+..... ...+.+.+|++++++++|+||+++++++...+..++|+||+++++|.++
T Consensus 12 ~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 89 (264)
T cd06626 12 TFGKVYTAVNLD--TGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEEL 89 (264)
T ss_pred CCcEEEEEEECC--CCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHH
Confidence 344444444333 345788888765443 3567899999999999999999999999999999999999999999999
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc-
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST- 603 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~- 603 (725)
+.+...+++..+..++.|+++||.|||+. +++|+||+|+||+++. ++.+||+|||++............
T Consensus 90 ~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~-------~~~~kl~d~g~~~~~~~~~~~~~~~ 159 (264)
T cd06626 90 LEHGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDH-------NGVIKLGDFGCAVKLKNNTTTMGEE 159 (264)
T ss_pred HhhcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC-------CCCEEEcccccccccCCCCCccccc
Confidence 98877789999999999999999999999 9999999999999987 788999999999876543332221
Q ss_pred --ccccCccccchhcccCCC---CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhH
Q 039817 604 --MIRGTMGYMAPEWLRNAP---VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATK 678 (725)
Q Consensus 604 --~~~gt~~y~aPE~~~~~~---~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (725)
...++..|+|||++.+.. .+.++||||||++++|+++|+.|+....... .. ............+...
T Consensus 160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-------~~-~~~~~~~~~~~~~~~~ 231 (264)
T cd06626 160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-------QI-MFHVGAGHKPPIPDSL 231 (264)
T ss_pred ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-------HH-HHHHhcCCCCCCCccc
Confidence 245788999999998766 8899999999999999999999986432110 00 0000000111222222
Q ss_pred --HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 679 --FERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 679 --~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+.+.+++.+|++.+|.+||++.+++.+
T Consensus 232 ~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 232 QLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 6778899999999999999999998763
No 232
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.8e-31 Score=280.71 Aligned_cols=229 Identities=25% Similarity=0.288 Sum_probs=187.7
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.+|+.|..|... +.+...|||.+++. ..++.+..+.|.+++... +||.|+.|+..++..++.++||||..||++
T Consensus 379 GsFGkV~lae~k--~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm 456 (694)
T KOG0694|consen 379 GSFGKVLLAELK--GTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDL 456 (694)
T ss_pred CcCceEEEEEEc--CCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcE
Confidence 344544444433 34458899999864 345667889999998877 599999999999999999999999999994
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
. ++.+.+.+++..+.-++..|+.||+|||++ +||+||||.+|||||. +|.+||+||||++....... .
T Consensus 457 ~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~-------eGh~kiADFGlcKe~m~~g~-~ 524 (694)
T KOG0694|consen 457 M-HHIHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDT-------EGHVKIADFGLCKEGMGQGD-R 524 (694)
T ss_pred E-EEEecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcc-------cCcEEecccccccccCCCCC-c
Confidence 3 333557899999999999999999999999 9999999999999988 99999999999996543332 3
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATKF 679 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 679 (725)
...++||+.|||||.+.+..|+.+.|.|+|||+||||+.|..||.....++ +...+. ...+|.-.+
T Consensus 525 TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee------------~FdsI~~d~~~yP~~ls 592 (694)
T KOG0694|consen 525 TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE------------VFDSIVNDEVRYPRFLS 592 (694)
T ss_pred cccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH------------HHHHHhcCCCCCCCccc
Confidence 445889999999999999999999999999999999999999998664332 222222 234566778
Q ss_pred HHHHHHHHHccCCCCCCCCCH
Q 039817 680 ERITMVGLWCICPQPTLRPSM 700 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~ 700 (725)
.+.+.++.+++.++|++|.-+
T Consensus 593 ~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 593 KEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHHHHHHhccCcccccCC
Confidence 889999999999999999865
No 233
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=1.5e-30 Score=271.53 Aligned_cols=239 Identities=25% Similarity=0.260 Sum_probs=187.5
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
.+|++++.+++.-+ +..+|+|.++... ......+.+|++++++++|+||+++++.+..++..++||||+++++|.
T Consensus 11 G~~g~vy~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 88 (285)
T cd05632 11 GGFGEVCACQVRAT--GKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLK 88 (285)
T ss_pred CCCeEEEEEEECCC--CcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHH
Confidence 44566666665543 4578889886432 223456789999999999999999999999999999999999999999
Q ss_pred hhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 523 AFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 523 ~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~-------~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05632 89 FHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDD-------YGHIRISDLGLAVKIPEGES- 157 (285)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECC-------CCCEEEecCCcceecCCCCc-
Confidence 988653 4689999999999999999999998 9999999999999987 77899999999876432221
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCChhH
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGATK 678 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 678 (725)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.|+....... ..+.+...... ...+...
T Consensus 158 -~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 228 (285)
T cd05632 158 -IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV--------KREEVDRRVLETEEVYSAKF 228 (285)
T ss_pred -ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHHhhhccccccCccC
Confidence 122458999999999998899999999999999999999999986432111 01111111111 1233455
Q ss_pred HHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 039817 679 FERITMVGLWCICPQPTLRPS-----MKQVLQM 706 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs-----~~evl~~ 706 (725)
...+.+|+..|++.||++||+ +++++++
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred CHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 677899999999999999999 7777765
No 234
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=3.1e-30 Score=267.19 Aligned_cols=239 Identities=23% Similarity=0.312 Sum_probs=182.0
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhcc-CcCCccceeeEEEcC------CceeeeeecccC
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQ------NHQLLVYELMKN 518 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~------~~~~lV~e~~~~ 518 (725)
.+|++++.+... +.+..||+|.+... ......+.+|+.+++++ +|+||+++++++... ...++||||+++
T Consensus 17 g~~g~vy~~~~~--~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~ 93 (272)
T cd06637 17 GTYGQVYKGRHV--KTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGA 93 (272)
T ss_pred cCCeEEEEEEEc--CCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCC
Confidence 344555555443 33467888887643 34556789999999998 799999999998753 457899999999
Q ss_pred CChhhhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 519 GTLSAFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 519 gsL~~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
++|.+++... ..+++..+..++.|++.||+|||+. +|+|+||||+||+++. ++.+||+|||+++....
T Consensus 94 ~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~-------~~~~~l~Dfg~~~~~~~ 163 (272)
T cd06637 94 GSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTE-------NAEVKLVDFGVSAQLDR 163 (272)
T ss_pred CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECC-------CCCEEEccCCCceeccc
Confidence 9999998764 4689999999999999999999998 9999999999999987 78899999999986543
Q ss_pred CCCccccccccCccccchhccc-----CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc
Q 039817 597 DQTRTSTMIRGTMGYMAPEWLR-----NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT 671 (725)
Q Consensus 597 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (725)
... ......|+..|+|||++. ...++.++||||||+++|||++|+.|+....... ...........
T Consensus 164 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~--------~~~~~~~~~~~ 234 (272)
T cd06637 164 TVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--------ALFLIPRNPAP 234 (272)
T ss_pred ccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH--------HHHHHhcCCCC
Confidence 222 222345888999999986 3467889999999999999999999985322110 00000000000
Q ss_pred CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 672 GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 672 ~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..........+.+++.+||+.+|.+|||+.+++++
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 235 RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 11122345688999999999999999999999864
No 235
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=2.8e-30 Score=264.84 Aligned_cols=235 Identities=22% Similarity=0.304 Sum_probs=185.0
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
+++++.+.+... +..+++|.++.. .....+.+.+|+.++++++|+||+++++.+..++..++||||+++++|.+++.
T Consensus 13 ~g~v~~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 90 (255)
T cd08219 13 FGRALLVQHVNS--DQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIK 90 (255)
T ss_pred CeEEEEEEEcCC--CceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHH
Confidence 334444444333 346788876432 23345678899999999999999999999999999999999999999999886
Q ss_pred cC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 527 RQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 527 ~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
.. ..++......++.|++.||.|||+. +++|+||||+||+++. ++.++++|||++......... ...
T Consensus 91 ~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~-------~~~~~l~dfg~~~~~~~~~~~-~~~ 159 (255)
T cd08219 91 LQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQ-------NGKVKLGDFGSARLLTSPGAY-ACT 159 (255)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECC-------CCcEEEcccCcceeecccccc-ccc
Confidence 43 4578999999999999999999999 9999999999999987 788999999999765433221 122
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhHHHHH
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATKFERI 682 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 682 (725)
..++..|+|||.+.+..++.++|+||||+++++|++|+.|+..... ......... ....+......+
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 228 (255)
T cd08219 160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----------KNLILKVCQGSYKPLPSHYSYEL 228 (255)
T ss_pred ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----------HHHHHHHhcCCCCCCCcccCHHH
Confidence 4588899999999988999999999999999999999999864321 111111111 112334456778
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+++.+||+.||++||++.+++..
T Consensus 229 ~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 229 RSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHhCCcccCCCHHHHhhc
Confidence 999999999999999999999864
No 236
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.97 E-value=8.8e-31 Score=300.04 Aligned_cols=248 Identities=23% Similarity=0.270 Sum_probs=188.2
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..+++.+++|.+... +..||+|.+.... ....+.|.+|++++++++||||+++++++.+++..++||||+++++|
T Consensus 12 kGgfG~VYlA~d~~t--g~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL 89 (932)
T PRK13184 12 KGGMGEVYLAYDPVC--SRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTL 89 (932)
T ss_pred cCCCEEEEEEEECCC--CcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCH
Confidence 345667777765544 4578999886432 22346799999999999999999999999999999999999999999
Q ss_pred hhhhccC-----------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccC
Q 039817 522 SAFLFRQ-----------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGL 590 (725)
Q Consensus 522 ~~~l~~~-----------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgl 590 (725)
.+++... ...++..+++++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 90 ~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~-------dg~vKLiDFGL 159 (932)
T PRK13184 90 KSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGL-------FGEVVILDWGA 159 (932)
T ss_pred HHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcC-------CCCEEEEecCc
Confidence 9988531 2346778899999999999999999 9999999999999987 78899999999
Q ss_pred ccccCcCCC-----------------ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcc
Q 039817 591 AKLLKKDQT-----------------RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEP 653 (725)
Q Consensus 591 a~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~ 653 (725)
++....... .......||+.|+|||.+.+..++.++||||||++++||++|+.|+........
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki 239 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI 239 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence 986521110 001124589999999999999999999999999999999999999865322110
Q ss_pred ccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhcCCC
Q 039817 654 TLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRP-SMKQVLQMLEGTS 711 (725)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP-s~~evl~~L~~~~ 711 (725)
.......... ........++.+.+++.+|++.||++|| +++++++.|+...
T Consensus 240 ------~~~~~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 240 ------SYRDVILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred ------hhhhhccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0000000000 0001123456788999999999999996 6777877776654
No 237
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=1.5e-30 Score=268.80 Aligned_cols=236 Identities=23% Similarity=0.271 Sum_probs=181.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc-----CccHHHHHHHHHHHhccCcCCccceeeEEEc--CCceeeeeecccCC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT-----GDGEKSFLREVQVIGRTHHKNLVQLLGFCIE--QNHQLLVYELMKNG 519 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~e~~~~g 519 (725)
+++.++++.+... +..+++|.+.... ....+.+.+|+.++++++|+||+++++++.+ +...++++||++++
T Consensus 14 ~~g~vy~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~ 91 (266)
T cd06651 14 AFGRVYLCYDVDT--GRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGG 91 (266)
T ss_pred CCEEEEEEEEcCC--CcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCC
Confidence 4455555555444 3467788765322 1233568899999999999999999999875 35778999999999
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 520 sL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
+|.+++.+...+++.....++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++.......
T Consensus 92 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~-------~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 92 SVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDS-------AGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECC-------CCCEEEccCCCccccccccc
Confidence 9999998877889999999999999999999998 9999999999999987 78899999999876532211
Q ss_pred --ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH---cCCC
Q 039817 600 --RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR---TGNL 674 (725)
Q Consensus 600 --~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 674 (725)
.......++..|+|||.+.+..++.++||||||+++|||++|+.|+...... ........ ...+
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-----------~~~~~~~~~~~~~~~ 230 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM-----------AAIFKIATQPTNPQL 230 (266)
T ss_pred cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH-----------HHHHHHhcCCCCCCC
Confidence 1112244788999999999888999999999999999999999998643111 11111111 1223
Q ss_pred ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 675 GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 675 ~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+....+.+..++ +|+..+|++||+++||+++
T Consensus 231 ~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 231 PSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred chhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 334456677776 6888999999999999864
No 238
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=2.7e-30 Score=265.11 Aligned_cols=236 Identities=23% Similarity=0.316 Sum_probs=187.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.+++++.+.+..+ +..+++|.+... .....+++.+|++++++++|+||+++++++...+..++||||+++++|.++
T Consensus 12 ~~g~~~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~ 89 (256)
T cd08218 12 SFGKAILVKSKED--GKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKK 89 (256)
T ss_pred CceEEEEEEEcCC--CCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHH
Confidence 3444444444433 357888887532 233456899999999999999999999999999999999999999999999
Q ss_pred hccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 525 LFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 525 l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.++|+|||++......... .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~-------~~~~~l~d~~~~~~~~~~~~~-~ 158 (256)
T cd08218 90 INAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTK-------DGTIKLGDFGIARVLNSTVEL-A 158 (256)
T ss_pred HHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcC-------CCCEEEeeccceeecCcchhh-h
Confidence 8754 3578999999999999999999998 9999999999999987 778999999999865443221 1
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCChhHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGATKFE 680 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 680 (725)
....++..|+|||++.+...+.++|+||||++++||++|+.|+..... .+.+...... ...+.....
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 227 (256)
T cd08218 159 RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-----------KNLVLKIIRGSYPPVSSHYSY 227 (256)
T ss_pred hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-----------HHHHHHHhcCCCCCCcccCCH
Confidence 223478889999999988999999999999999999999998864321 1112221111 123345567
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 681 RITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+.+++.+|++.+|.+||++.+|+++
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 228 DLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 89999999999999999999999975
No 239
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=3.7e-30 Score=268.57 Aligned_cols=241 Identities=26% Similarity=0.301 Sum_probs=187.1
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..|++++.+.+..+ +..+|||.+.... ....+.+.+|+.++++++|+|++++++.+..++..++||||+++++|.
T Consensus 11 G~~g~v~~~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~ 88 (285)
T cd05630 11 GGFGEVCACQVRAT--GKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK 88 (285)
T ss_pred CCCeEEEEEEEcCC--CceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHH
Confidence 34555655555544 3578888875432 222356789999999999999999999999999999999999999999
Q ss_pred hhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 523 AFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 523 ~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.++|+|||++........
T Consensus 89 ~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~-------~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05630 89 FHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDD-------HGHIRISDLGLAVHVPEGQT- 157 (285)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECC-------CCCEEEeeccceeecCCCcc-
Confidence 998644 4588999999999999999999998 9999999999999987 77899999999876543221
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHH
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFE 680 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (725)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.|+........ .......... . ....+.....
T Consensus 158 -~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~----~~~~~~~~~~-~-~~~~~~~~~~ 230 (285)
T cd05630 158 -IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----REEVERLVKE-V-QEEYSEKFSP 230 (285)
T ss_pred -ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch----HHHHHhhhhh-h-hhhcCccCCH
Confidence 1223589999999999999999999999999999999999999975322110 0000111111 1 1123344567
Q ss_pred HHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 039817 681 RITMVGLWCICPQPTLRPS-----MKQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs-----~~evl~~ 706 (725)
.+.+++..||+.||++||| ++|++++
T Consensus 231 ~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 231 DARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred HHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 7899999999999999999 8888874
No 240
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.9e-30 Score=272.44 Aligned_cols=239 Identities=21% Similarity=0.264 Sum_probs=187.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
.++.++++.+..+ +..|++|.+........+.+.+|+.++++++|+||+++++++..++..++||||+++++|.+++.
T Consensus 31 ~~g~v~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 108 (297)
T cd06656 31 ASGTVYTAIDIAT--GQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT 108 (297)
T ss_pred CCeEEEEEEECCC--CCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHH
Confidence 3445555554333 45788898865555556778999999999999999999999999999999999999999999985
Q ss_pred cCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccc
Q 039817 527 RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIR 606 (725)
Q Consensus 527 ~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 606 (725)
+ ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++......... .....
T Consensus 109 ~-~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~-------~~~~~l~Dfg~~~~~~~~~~~-~~~~~ 176 (297)
T cd06656 109 E-TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGM-------DGSVKLTDFGFCAQITPEQSK-RSTMV 176 (297)
T ss_pred h-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC-------CCCEEECcCccceEccCCccC-cCccc
Confidence 4 4578999999999999999999998 9999999999999987 789999999998765433221 12234
Q ss_pred cCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHH
Q 039817 607 GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVG 686 (725)
Q Consensus 607 gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 686 (725)
++..|+|||.+.+..++.++||||||+++|++++|+.|+........... ...........+......+.+++
T Consensus 177 ~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~li 249 (297)
T cd06656 177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-------IATNGTPELQNPERLSAVFRDFL 249 (297)
T ss_pred CCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-------eccCCCCCCCCccccCHHHHHHH
Confidence 78899999999988899999999999999999999999865432111000 00000000112234456788999
Q ss_pred HHccCCCCCCCCCHHHHHHH
Q 039817 687 LWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 687 ~~cl~~dp~~RPs~~evl~~ 706 (725)
.+||+.+|++||++++++++
T Consensus 250 ~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 250 NRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHHccCChhhCcCHHHHhcC
Confidence 99999999999999999984
No 241
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=2.6e-30 Score=269.73 Aligned_cols=245 Identities=22% Similarity=0.233 Sum_probs=183.2
Q ss_pred HHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
++.++++.+..+ +..|++|.+.... ....+.+.+|++++++++|+||+++++++..+...++||||+++++|..++
T Consensus 14 ~~~v~~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~ 91 (286)
T cd07847 14 YGVVFKCRNRET--GQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELE 91 (286)
T ss_pred CeEEEEEEECCC--CcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHH
Confidence 444555544333 4578888775332 234467889999999999999999999999999999999999999999888
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 526 FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 526 ~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
.....+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++......... ....
T Consensus 92 ~~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~-------~~~~~l~dfg~~~~~~~~~~~-~~~~ 160 (286)
T cd07847 92 KNPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITK-------QGQIKLCDFGFARILTGPGDD-YTDY 160 (286)
T ss_pred hCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcC-------CCcEEECccccceecCCCccc-ccCc
Confidence 7777899999999999999999999998 9999999999999987 788999999999876543221 1123
Q ss_pred ccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccccc----CcchHHHHHHHHHcC------CC
Q 039817 606 RGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN----GMILTDWVLYCVRTG------NL 674 (725)
Q Consensus 606 ~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~------~~ 674 (725)
.++..|+|||.+.+ ..++.++||||||++++||++|+.|+......+..... ...... ........ ..
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 239 (286)
T cd07847 161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPR-HQQIFSTNQFFKGLSI 239 (286)
T ss_pred ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChH-HhhhcccccccccccC
Confidence 46788999999876 56789999999999999999999998643321100000 000000 00000000 00
Q ss_pred ------------ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 675 ------------GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 675 ------------~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.......+.+++.+||+.+|++||++.|++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 240 PEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred CCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 01234678899999999999999999999865
No 242
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.97 E-value=2.6e-30 Score=267.88 Aligned_cols=247 Identities=25% Similarity=0.369 Sum_probs=187.0
Q ss_pred cccHHHHHHHhcccC-CcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCC------ceeeeeec
Q 039817 445 VFSYQELREATNVFD-GQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYEL 515 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~-~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~lV~e~ 515 (725)
...++.+++|..... +.+..||||.+... .....+++.+|++++++++||||+++++++.... ..++++||
T Consensus 9 ~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (273)
T cd05074 9 KGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPF 88 (273)
T ss_pred CCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEec
Confidence 345566776665433 45678999988643 2334567899999999999999999999986542 24789999
Q ss_pred ccCCChhhhhccC------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeecc
Q 039817 516 MKNGTLSAFLFRQ------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFG 589 (725)
Q Consensus 516 ~~~gsL~~~l~~~------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfg 589 (725)
+++|+|.+++... ..+++.....++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 89 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~-------~~~~kl~dfg 158 (273)
T cd05074 89 MKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNE-------NMTVCVADFG 158 (273)
T ss_pred CCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcC-------CCCEEECccc
Confidence 9999999887532 2468899999999999999999998 9999999999999977 7889999999
Q ss_pred CccccCcCCCc-cccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHH
Q 039817 590 LAKLLKKDQTR-TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLY 667 (725)
Q Consensus 590 la~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (725)
+++........ ......++..|++||.+.+..++.++||||||+++|||++ |+.|+..... .........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~~ 230 (273)
T cd05074 159 LSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--------SEIYNYLIK 230 (273)
T ss_pred ccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--------HHHHHHHHc
Confidence 99865432211 1122335678999999998889999999999999999999 6676643211 011111110
Q ss_pred HHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 668 CVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 668 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
. .....+......+.+++.+|++.+|++||++.++++.|+++
T Consensus 231 ~-~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 G-NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred C-CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 01122234567899999999999999999999999999865
No 243
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=6.3e-30 Score=265.77 Aligned_cols=236 Identities=22% Similarity=0.289 Sum_probs=186.3
Q ss_pred HHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
|+.++.|.+... +..|++|.+.... ......+.+|+.++++++|+||+++++.+..+...++||||+++++|.+++.
T Consensus 17 ~~~vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 94 (277)
T cd06640 17 FGEVFKGIDNRT--QQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLR 94 (277)
T ss_pred CeEEEEEEEccC--CEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHh
Confidence 444444544333 4578888876432 3445678999999999999999999999999999999999999999999986
Q ss_pred cCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccc
Q 039817 527 RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIR 606 (725)
Q Consensus 527 ~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 606 (725)
. ..+++.....++.|++.||.|||+. +++|+||+|+||+++. ++.++|+|||++......... .....
T Consensus 95 ~-~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~-------~~~~~l~dfg~~~~~~~~~~~-~~~~~ 162 (277)
T cd06640 95 A-GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSE-------QGDVKLADFGVAGQLTDTQIK-RNTFV 162 (277)
T ss_pred c-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcC-------CCCEEEcccccceeccCCccc-ccccc
Confidence 4 5688899999999999999999998 9999999999999987 778999999999765433221 22234
Q ss_pred cCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHH
Q 039817 607 GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVG 686 (725)
Q Consensus 607 gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 686 (725)
++..|+|||.+.+..++.++||||||+++|||++|..|+........ .... .......+....+..+.+++
T Consensus 163 ~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~li 233 (277)
T cd06640 163 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--------LFLI-PKNNPPTLTGEFSKPFKEFI 233 (277)
T ss_pred CcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--------hhhh-hcCCCCCCchhhhHHHHHHH
Confidence 78889999999888899999999999999999999998864321110 0000 00011223335677899999
Q ss_pred HHccCCCCCCCCCHHHHHHH
Q 039817 687 LWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 687 ~~cl~~dp~~RPs~~evl~~ 706 (725)
.+||+.+|++||++++++++
T Consensus 234 ~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 234 DACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HHHcccCcccCcCHHHHHhC
Confidence 99999999999999999877
No 244
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=4.3e-30 Score=263.65 Aligned_cols=236 Identities=26% Similarity=0.328 Sum_probs=189.3
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc-----CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT-----GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
..++.+++|++..+ +..|++|.+.... .+..+.+.+|++++++++|+||+++++++..+...++|+||+++++
T Consensus 11 g~~~~vy~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (258)
T cd06632 11 GSFGSVYEGLNLDD--GDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGS 88 (258)
T ss_pred cCCceEEEEEEcCC--CcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCc
Confidence 34556666665433 3568888775432 2345679999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|.+++.+...+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++.......
T Consensus 89 L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~-------~~~~kl~d~~~~~~~~~~~-- 156 (258)
T cd06632 89 LAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDT-------NGVVKLADFGMAKQVVEFS-- 156 (258)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC-------CCCEEEccCccceeccccc--
Confidence 999998877789999999999999999999998 9999999999999987 7899999999988654332
Q ss_pred cccccccCccccchhcccCCC-CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH---HcCCCCh
Q 039817 601 TSTMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV---RTGNLGA 676 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~-~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 676 (725)
......++..|+|||.+.... ++.++|+||||+++++|++|+.|+..... .+...... .....+.
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-----------~~~~~~~~~~~~~~~~~~ 225 (258)
T cd06632 157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-----------VAAVFKIGRSKELPPIPD 225 (258)
T ss_pred cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-----------HHHHHHHHhcccCCCcCC
Confidence 122345788899999987766 89999999999999999999999864321 11111111 1123344
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...+.+.+++.+||+.+|.+||++++++++
T Consensus 226 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 226 HLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred CcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 556789999999999999999999999864
No 245
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.97 E-value=2.1e-30 Score=277.22 Aligned_cols=189 Identities=26% Similarity=0.353 Sum_probs=159.8
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccC-cC-----CccceeeEEEcCCceeeeeeccc
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTH-HK-----NLVQLLGFCIEQNHQLLVYELMK 517 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~-H~-----niv~l~g~~~~~~~~~lV~e~~~ 517 (725)
...+|+.|.+|++..++ ..||||++++. ..-..+-..|+.+|..|+ |. |+|++++++...++.|||+|.++
T Consensus 195 GkGtFGQVvk~~d~~T~--e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~ 271 (586)
T KOG0667|consen 195 GKGSFGQVVKAYDHKTG--EIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS 271 (586)
T ss_pred cccccceeEEEEecCCC--cEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh
Confidence 45678888888887665 57888888764 334556678999999986 43 89999999999999999999997
Q ss_pred CCChhhhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccC
Q 039817 518 NGTLSAFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLK 595 (725)
Q Consensus 518 ~gsL~~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~ 595 (725)
. +|.++|..+ ..++...+..|+.||+.||..||+. +|||+||||+||||.+-. ...+||+|||.++...
T Consensus 272 ~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~-----r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 272 T-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPK-----RSRIKVIDFGSSCFES 342 (586)
T ss_pred h-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCC-----cCceeEEecccccccC
Confidence 6 999999876 5688999999999999999999999 999999999999997632 5589999999998754
Q ss_pred cCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCC
Q 039817 596 KDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELH 648 (725)
Q Consensus 596 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~ 648 (725)
.... ....+..|+|||++.+.+|+.+.|+||||||+.||++|.+.|...
T Consensus 343 q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 343 QRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred Ccce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 3322 234677899999999999999999999999999999998877543
No 246
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=4.3e-30 Score=269.17 Aligned_cols=236 Identities=23% Similarity=0.292 Sum_probs=184.9
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
.++.++++.+..+ +..+++|.+........+.+.+|++++++++|+||+++++.+..++..++||||+++++|..++.
T Consensus 24 ~~g~vy~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 101 (292)
T cd06644 24 AFGKVYKAKNKET--GALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIML 101 (292)
T ss_pred CCeEEEEEEECCC--CceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHH
Confidence 4445555544333 35788888876656667789999999999999999999999999999999999999999998876
Q ss_pred cC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 527 RQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 527 ~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
+. ..+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||++........ .....
T Consensus 102 ~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~-------~~~~kl~dfg~~~~~~~~~~-~~~~~ 170 (292)
T cd06644 102 ELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTL-------DGDIKLADFGVSAKNVKTLQ-RRDSF 170 (292)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcC-------CCCEEEccCccceecccccc-cccee
Confidence 53 5689999999999999999999998 9999999999999976 78899999999875432211 11234
Q ss_pred ccCccccchhccc-----CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC----CCCh
Q 039817 606 RGTMGYMAPEWLR-----NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG----NLGA 676 (725)
Q Consensus 606 ~gt~~y~aPE~~~-----~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 676 (725)
.++..|+|||.+. ...++.++||||||+++|||++|+.|+...... .......... ..+.
T Consensus 171 ~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 239 (292)
T cd06644 171 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----------RVLLKIAKSEPPTLSQPS 239 (292)
T ss_pred cCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-----------HHHHHHhcCCCccCCCCc
Confidence 4788999999984 345788999999999999999999988643211 1111111111 1123
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.....+.+++.+||+.+|++||++++++++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 240 KWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred ccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 445678999999999999999999999875
No 247
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=3.2e-30 Score=272.44 Aligned_cols=248 Identities=19% Similarity=0.245 Sum_probs=183.0
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
..+|+.++++++..+ +..||+|.++... ......+.+|++++++++|+||+++++++..++..++||||+++ +|.+
T Consensus 16 ~G~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~ 92 (309)
T cd07872 16 EGTYATVFKGRSKLT--ENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQ 92 (309)
T ss_pred ccCCEEEEEEEecCC--CCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHH
Confidence 345666776665444 3468888876432 23345688999999999999999999999999999999999986 8888
Q ss_pred hhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 524 FLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 524 ~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++........ .
T Consensus 93 ~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~-------~~~~kl~Dfg~~~~~~~~~~~-~ 161 (309)
T cd07872 93 YMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINE-------RGELKLADFGLARAKSVPTKT-Y 161 (309)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECC-------CCCEEECccccceecCCCccc-c
Confidence 87654 4578999999999999999999999 9999999999999987 788999999999764332221 1
Q ss_pred cccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc-----cCcchHHHH-------HHHH
Q 039817 603 TMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA-----NGMILTDWV-------LYCV 669 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~-----~~~~~~~~~-------~~~~ 669 (725)
....++..|+|||.+.+ ..++.++||||||++++||++|+.||......+.... .......|- ....
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07872 162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNY 241 (309)
T ss_pred ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh
Confidence 22347889999998865 4688999999999999999999999865432110000 000000000 0000
Q ss_pred HcCC--------CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 670 RTGN--------LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 670 ~~~~--------~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.... ......+.+.+++.+|++.||.+|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 242 NFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0000 001235678899999999999999999999974
No 248
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=2.3e-30 Score=266.67 Aligned_cols=241 Identities=23% Similarity=0.336 Sum_probs=186.7
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccc--ccCccHHHHHHHHHHHhccCcCCccceeeEEEc--CCceeeeeecccCCChh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEK--VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE--QNHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~e~~~~gsL~ 522 (725)
.++.++++.+..++ ..+++|.+.. ......+.+.+|++++++++|+||+++++++.. +...+++|||+++++|.
T Consensus 12 ~~~~v~~~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~ 89 (265)
T cd08217 12 SFGTVRKVRRKSDG--KILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLA 89 (265)
T ss_pred CCeEEEEeeecCCC--CEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHH
Confidence 45555666555444 4677787753 233445678899999999999999999998764 45678999999999999
Q ss_pred hhhcc----CCCCCHHHHHHHHHHHHHHhhhhhccc--CCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 523 AFLFR----QEIPTWDKRVEIALGIARGLLYLHEEC--ETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 523 ~~l~~----~~~l~~~~~~~i~~qia~gL~yLH~~~--~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
+++.. ...+++..++.++.|++.||.|||..+ ..+++|+||+|+||+++. ++.+||+|||++.....
T Consensus 90 ~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~-------~~~~kl~d~g~~~~~~~ 162 (265)
T cd08217 90 QLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA-------NNNVKLGDFGLAKILGH 162 (265)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec-------CCCEEEecccccccccC
Confidence 99865 357899999999999999999999221 229999999999999987 78999999999987654
Q ss_pred CCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCCh
Q 039817 597 DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA 676 (725)
Q Consensus 597 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (725)
.... .....++..|+|||.+.+..++.++||||||+++++|++|+.|+...... .+.+.... .....++.
T Consensus 163 ~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~~~~~~ 232 (265)
T cd08217 163 DSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--------QLASKIKE-GKFRRIPY 232 (265)
T ss_pred Cccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--------HHHHHHhc-CCCCCCcc
Confidence 4321 12235788999999999888999999999999999999999998753211 11111111 01123444
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.....+.+++.+|++.+|++||++.+|+++
T Consensus 233 ~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 233 RYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 567889999999999999999999999976
No 249
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.97 E-value=3e-30 Score=258.41 Aligned_cols=251 Identities=23% Similarity=0.225 Sum_probs=187.8
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccC--ccHHHHHHHHHHHhccCcCC-ccceeeEEEcCC------ceeeeeec
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTG--DGEKSFLREVQVIGRTHHKN-LVQLLGFCIEQN------HQLLVYEL 515 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~--~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~------~~~lV~e~ 515 (725)
..+|+.+++|...-+| ..||+|++.-... .......+|+.++++++|+| ||+|++++...+ ..++|+||
T Consensus 21 eGtyg~Vykar~~~~g--~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~ 98 (323)
T KOG0594|consen 21 EGTYGVVYKARSKRTG--KFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEF 98 (323)
T ss_pred CCCceEEEEEEEecCC--CEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEe
Confidence 4567777777777666 5677777653322 24456789999999999999 999999999877 78899999
Q ss_pred ccCCChhhhhccCC----CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCc
Q 039817 516 MKNGTLSAFLFRQE----IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLA 591 (725)
Q Consensus 516 ~~~gsL~~~l~~~~----~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla 591 (725)
++. +|.+++.... .++...+..++.|+++||+|||+. +|+||||||+||||++ .+.+||+|||+|
T Consensus 99 ~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~-------~G~lKlaDFGlA 167 (323)
T KOG0594|consen 99 LDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISS-------SGVLKLADFGLA 167 (323)
T ss_pred ecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECC-------CCcEeeeccchH
Confidence 976 8999987653 467788999999999999999999 9999999999999988 899999999999
Q ss_pred cccCcCCCccccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccc--------------cc
Q 039817 592 KLLKKDQTRTSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT--------------LA 656 (725)
Q Consensus 592 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~--------------~~ 656 (725)
+.+.-.... .+...+|.-|.|||.+.+. .|+...||||+||++.||++++..|.......+. ..
T Consensus 168 ra~~ip~~~-yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 168 RAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred HHhcCCccc-ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence 966533222 3345588899999999876 7999999999999999999988887654321100 00
Q ss_pred cCcchHHHHHHHHHcCCCCh-------hHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hcCC
Q 039817 657 NGMILTDWVLYCVRTGNLGA-------TKFERITMVGLWCICPQPTLRPSMKQVLQM--LEGT 710 (725)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~l~~~cl~~dp~~RPs~~evl~~--L~~~ 710 (725)
....+.++-.. +....-+. .......+++.+|++.+|.+|.|++.++.| +..+
T Consensus 247 ~v~~~~~~k~~-f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 247 GVSSLPDYKAP-FPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred Ccccccccccc-CcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 00000000000 00000000 112468889999999999999999999987 5543
No 250
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=5.7e-30 Score=273.04 Aligned_cols=238 Identities=22% Similarity=0.221 Sum_probs=181.6
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..|++|+.+....+ +..||+|.+.+. .....+.|.+|+.++..++|+||+++++++.+++..++||||+++|+|.
T Consensus 12 G~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~ 89 (331)
T cd05597 12 GAFGEVAVVKMKNT--GQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLL 89 (331)
T ss_pred cCCeEEEEEEECCC--CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHH
Confidence 34555555554443 357889988542 2233456889999999999999999999999999999999999999999
Q ss_pred hhhcc-CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+++.+ ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||++..........
T Consensus 90 ~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~-------~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 90 TLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDK-------NGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECC-------CCCEEEEECCceeecCCCCCcc
Confidence 99976 45789999999999999999999999 9999999999999987 7899999999987654433322
Q ss_pred ccccccCccccchhcccC-----CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc---CC
Q 039817 602 STMIRGTMGYMAPEWLRN-----APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT---GN 673 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~-----~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 673 (725)
.....||+.|+|||.+.. ..++.++||||||+++|||++|+.||...... +........ ..
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~-----------~~~~~i~~~~~~~~ 228 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-----------ETYGKIMNHKEHFQ 228 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH-----------HHHHHHHcCCCccc
Confidence 233458999999999863 45788999999999999999999998643211 111111110 11
Q ss_pred CC---hhHHHHHHHHHHHccCCCCC--CCCCHHHHHHH
Q 039817 674 LG---ATKFERITMVGLWCICPQPT--LRPSMKQVLQM 706 (725)
Q Consensus 674 ~~---~~~~~~l~~l~~~cl~~dp~--~RPs~~evl~~ 706 (725)
++ ...++.+.+++.+|+..+++ .||++++++++
T Consensus 229 ~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 11 12466788888887765443 48899999988
No 251
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=5e-30 Score=267.62 Aligned_cols=234 Identities=21% Similarity=0.310 Sum_probs=185.7
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhcc
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR 527 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~ 527 (725)
++.++.+.+.. .+..+++|.+........+.+.+|+.++++++|+||+++++++..++..++|+||+++++|.+++..
T Consensus 32 ~g~v~~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 109 (285)
T cd06648 32 TGIVCIATDKS--TGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH 109 (285)
T ss_pred CeEEEEEEECC--CCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh
Confidence 34444444332 2357888887655455567789999999999999999999999999999999999999999999976
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccccc
Q 039817 528 QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRG 607 (725)
Q Consensus 528 ~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g 607 (725)
..+++..+..++.|++.||+|||+. +++||||+|+||+++. ++.+||+|||++......... .....|
T Consensus 110 -~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~-------~~~~~l~d~g~~~~~~~~~~~-~~~~~~ 177 (285)
T cd06648 110 -TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTS-------DGRVKLSDFGFCAQVSKEVPR-RKSLVG 177 (285)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcC-------CCcEEEcccccchhhccCCcc-cccccC
Confidence 5689999999999999999999999 9999999999999987 789999999988755433221 122448
Q ss_pred CccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCC--ChhHHHHHH
Q 039817 608 TMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNL--GATKFERIT 683 (725)
Q Consensus 608 t~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~l~ 683 (725)
+..|+|||.+.+..++.++||||||++++||++|+.|+...... ......... ... .......+.
T Consensus 178 ~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (285)
T cd06648 178 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL-----------QAMKRIRDNLPPKLKNLHKVSPRLR 246 (285)
T ss_pred CccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH-----------HHHHHHHhcCCCCCcccccCCHHHH
Confidence 88999999998888999999999999999999999998642211 111111111 111 112457899
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 039817 684 MVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 684 ~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+++.+||+.+|++||++.+++++
T Consensus 247 ~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 247 SFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred HHHHHHcccChhhCcCHHHHccC
Confidence 99999999999999999999974
No 252
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=3.9e-30 Score=271.21 Aligned_cols=239 Identities=18% Similarity=0.176 Sum_probs=183.9
Q ss_pred HHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
|+.++.+.+... +..|++|.+.... ....+.+.+|++++++++|+||+++++.+..++..++||||+++++|.++
T Consensus 14 ~~~v~~~~~~~~--~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~ 91 (305)
T cd05609 14 YGAVYLVRHKET--RQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATL 91 (305)
T ss_pred CeeEEEEEECCC--CcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHH
Confidence 334444444333 3568888775432 23345788999999999999999999999999999999999999999999
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC------
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ------ 598 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~------ 598 (725)
+.....+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++......
T Consensus 92 l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~-------~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (305)
T cd05609 92 LKNIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITS-------MGHIKLTDFGLSKIGLMSLTTNLYE 161 (305)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECC-------CCCEEEeeCCCccccCcCccccccc
Confidence 98878899999999999999999999998 9999999999999987 7899999999987421100
Q ss_pred --------CccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH
Q 039817 599 --------TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR 670 (725)
Q Consensus 599 --------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (725)
........++..|+|||.+.+..++.++||||||+++|||++|+.|+..... .+.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-----------~~~~~~~~~ 230 (305)
T cd05609 162 GHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----------EELFGQVIS 230 (305)
T ss_pred cccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHh
Confidence 0011123477889999999888899999999999999999999999863321 111111111
Q ss_pred c----CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 039817 671 T----GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 671 ~----~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~ 709 (725)
. .......+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 231 DDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred cccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1 11111346778999999999999999997666666654
No 253
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=4.2e-30 Score=277.39 Aligned_cols=245 Identities=23% Similarity=0.236 Sum_probs=179.9
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCC------ceeeeeeccc
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELMK 517 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~lV~e~~~ 517 (725)
..|+.++.+.+... +..||||.+... .......+.+|+.++++++||||+++++++...+ ..++||||++
T Consensus 32 G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (359)
T cd07876 32 GAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD 109 (359)
T ss_pred CCCEEEEEEEEcCC--CceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCC
Confidence 34556666655433 457899988542 2334567889999999999999999999987543 4699999997
Q ss_pred CCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcC
Q 039817 518 NGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKD 597 (725)
Q Consensus 518 ~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~ 597 (725)
+ +|.+.+. ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 110 ~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~-------~~~~kl~Dfg~a~~~~~~ 176 (359)
T cd07876 110 A-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKS-------DCTLKILDFGLARTACTN 176 (359)
T ss_pred c-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECC-------CCCEEEecCCCccccccC
Confidence 6 5666553 3478889999999999999999999 9999999999999987 789999999999764332
Q ss_pred CCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc------cc-cCcch----HHHHH
Q 039817 598 QTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT------LA-NGMIL----TDWVL 666 (725)
Q Consensus 598 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~------~~-~~~~~----~~~~~ 666 (725)
.. .....+|..|+|||.+.+..++.++||||||+++|||++|+.||......... .. ..... ...+.
T Consensus 177 ~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (359)
T cd07876 177 FM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVR 254 (359)
T ss_pred cc--CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 21 22345889999999999999999999999999999999999999754221100 00 00000 00011
Q ss_pred HHHHc-CC--------------------CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 667 YCVRT-GN--------------------LGATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 667 ~~~~~-~~--------------------~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
..... .. ......+.+.+++.+||+.||++|||+.|++++-
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 255 NYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred HHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 11000 00 0011245689999999999999999999999863
No 254
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=6.6e-30 Score=263.20 Aligned_cols=235 Identities=21% Similarity=0.235 Sum_probs=187.8
Q ss_pred HHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
++.++.+++.. .+..+++|.+.... ....+.+.+|++++++++|+||+++++.+..+...++|+||+++++|.++
T Consensus 6 ~~~v~~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 83 (262)
T cd05572 6 FGRVELVKVKS--KNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTI 83 (262)
T ss_pred ceEEEEEEECC--CCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHH
Confidence 33444444433 34578888875432 23456799999999999999999999999999999999999999999999
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
+.+...+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++....... ....
T Consensus 84 l~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~-------~~~~~l~df~~~~~~~~~~--~~~~ 151 (262)
T cd05572 84 LRDRGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDS-------NGYVKLVDFGFAKKLKSGQ--KTWT 151 (262)
T ss_pred HhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcC-------CCCEEEeeCCcccccCccc--cccc
Confidence 98887899999999999999999999998 9999999999999987 7899999999998765432 1122
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHH---HHcCCCChhHHHH
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYC---VRTGNLGATKFER 681 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 681 (725)
..++..|+|||.+.+..++.++|+||||+++|||++|..|+.....+. .+..... ......+....+.
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 222 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---------MEIYNDILKGNGKLEFPNYIDKA 222 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---------HHHHHHHhccCCCCCCCcccCHH
Confidence 457889999999988889999999999999999999999987543211 1111111 1122344445688
Q ss_pred HHHHHHHccCCCCCCCCC-----HHHHHH
Q 039817 682 ITMVGLWCICPQPTLRPS-----MKQVLQ 705 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs-----~~evl~ 705 (725)
+.+++.+||+.+|++||+ ++|+++
T Consensus 223 ~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 223 AKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 999999999999999999 677765
No 255
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=2.4e-30 Score=279.33 Aligned_cols=239 Identities=20% Similarity=0.226 Sum_probs=182.9
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
+|+.|+.+.+..+ +..||+|.+... .......+.+|++++.+++|+||+++++.+..++..++||||+++|+|.+
T Consensus 13 ~~g~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~ 90 (360)
T cd05627 13 AFGEVRLVQKKDT--GHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMT 90 (360)
T ss_pred CCEEEEEEEECCC--CCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHH
Confidence 4455555554433 457888887542 23345678899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC----
Q 039817 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT---- 599 (725)
Q Consensus 524 ~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~---- 599 (725)
++.+...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.......
T Consensus 91 ~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~-------~~~vkL~DfG~~~~~~~~~~~~~~ 160 (360)
T cd05627 91 LLMKKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDA-------KGHVKLSDFGLCTGLKKAHRTEFY 160 (360)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECC-------CCCEEEeeccCCcccccccccccc
Confidence 998888899999999999999999999999 9999999999999987 78999999999875432110
Q ss_pred ------------------------------ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCC
Q 039817 600 ------------------------------RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHR 649 (725)
Q Consensus 600 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~ 649 (725)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~ 240 (360)
T cd05627 161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (360)
T ss_pred cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence 00112458999999999999999999999999999999999999996543
Q ss_pred CCccccccCcchHHHHHHHHHcCCCCh--hHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 039817 650 VDEPTLANGMILTDWVLYCVRTGNLGA--TKFERITMVGLWCICPQPTLRPS---MKQVLQM 706 (725)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~cl~~dp~~RPs---~~evl~~ 706 (725)
... ....+........++. ...+.+.+++.+++ .+|.+|++ +.|+++|
T Consensus 241 ~~~--------~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 241 PQE--------TYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred HHH--------HHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 211 0000110000011121 24567888888876 49999984 6777766
No 256
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.97 E-value=9.6e-30 Score=263.09 Aligned_cols=241 Identities=24% Similarity=0.357 Sum_probs=183.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc----------cCccHHHHHHHHHHHhc-cCcCCccceeeEEEcCCceeeeeec
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV----------TGDGEKSFLREVQVIGR-THHKNLVQLLGFCIEQNHQLLVYEL 515 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~----------~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~~~~~~lV~e~ 515 (725)
.++.++.+..... .+..+++|.+... .......+.+|+.++.+ ++|+||+++++++.+++..++||||
T Consensus 12 ~~~~v~~~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 90 (269)
T cd08528 12 AFGCVYKVRKKNN-GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDL 90 (269)
T ss_pred CCceEEEEEEcCC-CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEec
Confidence 3444444444331 2357788876421 12234557889988875 7999999999999999999999999
Q ss_pred ccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHhhhhhc-ccCCceeecCCccceEEeccCccccCCCCceEEeeccC
Q 039817 516 MKNGTLSAFLFR----QEIPTWDKRVEIALGIARGLLYLHE-ECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGL 590 (725)
Q Consensus 516 ~~~gsL~~~l~~----~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgl 590 (725)
+++++|.+++.. ...+++..++.++.|++.||.|||+ . +++|+||+|+||+++. ++.+||+|||+
T Consensus 91 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~-------~~~~~l~dfg~ 160 (269)
T cd08528 91 IEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGE-------DDKVTITDFGL 160 (269)
T ss_pred CCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECC-------CCcEEEecccc
Confidence 999999988743 3568899999999999999999996 5 7999999999999987 78999999999
Q ss_pred ccccCcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH
Q 039817 591 AKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR 670 (725)
Q Consensus 591 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (725)
+....... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+...... ...........
T Consensus 161 ~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~--------~~~~~~~~~~~ 230 (269)
T cd08528 161 AKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML--------SLATKIVEAVY 230 (269)
T ss_pred eeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH--------HHHHHHhhccC
Confidence 98754432 223345888999999999888999999999999999999999987533211 01111111000
Q ss_pred cCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 671 TGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 671 ~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
.........+.+.+++.+|++.||++||++.||..+|+
T Consensus 231 ~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 231 EPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 00111134578999999999999999999999999986
No 257
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=5.1e-30 Score=264.37 Aligned_cols=227 Identities=26% Similarity=0.369 Sum_probs=183.5
Q ss_pred cceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC-CCCCHHHHHH
Q 039817 461 QEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVE 538 (725)
Q Consensus 461 ~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~ 538 (725)
.+..+++|.+.... ....+++.+|++++++++|+||+++++.+..++..++|+||+++++|.+++... ..++......
T Consensus 25 ~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~ 104 (265)
T cd06605 25 TGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGK 104 (265)
T ss_pred CCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHH
Confidence 34678888876543 344567999999999999999999999999999999999999999999999876 7789999999
Q ss_pred HHHHHHHHhhhhhc-ccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcc
Q 039817 539 IALGIARGLLYLHE-ECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617 (725)
Q Consensus 539 i~~qia~gL~yLH~-~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~ 617 (725)
++.|++.||.|||+ . +++|+||||+||+++. ++.+||+|||.+......... ...++..|+|||.+
T Consensus 105 ~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~-------~~~~~l~d~g~~~~~~~~~~~---~~~~~~~y~~PE~~ 171 (265)
T cd06605 105 IAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNS-------RGQIKLCDFGVSGQLVNSLAK---TFVGTSSYMAPERI 171 (265)
T ss_pred HHHHHHHHHHHHcCCC---CeecCCCCHHHEEECC-------CCCEEEeecccchhhHHHHhh---cccCChhccCHHHH
Confidence 99999999999999 7 9999999999999987 788999999998765332211 14578899999999
Q ss_pred cCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC--CCChh-HHHHHHHHHHHccCCCC
Q 039817 618 RNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG--NLGAT-KFERITMVGLWCICPQP 694 (725)
Q Consensus 618 ~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~l~~l~~~cl~~dp 694 (725)
.+..++.++||||||+++++|++|+.|+....... ....+.+....... ..+.. ....+.+++.+|+..+|
T Consensus 172 ~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 245 (265)
T cd06605 172 QGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP------DGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDP 245 (265)
T ss_pred cCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc------ccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCc
Confidence 98899999999999999999999999986542211 11122222221111 12222 56779999999999999
Q ss_pred CCCCCHHHHHHH
Q 039817 695 TLRPSMKQVLQM 706 (725)
Q Consensus 695 ~~RPs~~evl~~ 706 (725)
++|||+.+++++
T Consensus 246 ~~Rpt~~~ll~~ 257 (265)
T cd06605 246 RERPSYKELLEH 257 (265)
T ss_pred hhCcCHHHHhhC
Confidence 999999999865
No 258
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=6.4e-30 Score=272.82 Aligned_cols=237 Identities=21% Similarity=0.232 Sum_probs=181.0
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
.|++|+.+... +.+..+|+|.+.+. .......|.+|+.++..++|+||+++++.+..++..++||||+++|+|.+
T Consensus 13 ~fg~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~ 90 (332)
T cd05623 13 AFGEVAVVKLK--NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLT 90 (332)
T ss_pred CCeEEEEEEEC--CCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHH
Confidence 34444444433 23457888887532 22234458899999999999999999999999999999999999999999
Q ss_pred hhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 524 FLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 524 ~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
++.+. ..+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++...........
T Consensus 91 ~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~-------~~~~kL~DfG~a~~~~~~~~~~~ 160 (332)
T cd05623 91 LLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDM-------NGHIRLADFGSCLKLMEDGTVQS 160 (332)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECC-------CCCEEEeecchheecccCCccee
Confidence 99763 6789999999999999999999999 9999999999999987 78899999999976543333223
Q ss_pred cccccCccccchhccc-----CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc---CCC
Q 039817 603 TMIRGTMGYMAPEWLR-----NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT---GNL 674 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~-----~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 674 (725)
....||+.|+|||++. ...++.++||||||+++|||++|+.||...... +........ ...
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~-----------~~~~~i~~~~~~~~~ 229 (332)
T cd05623 161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-----------ETYGKIMNHKERFQF 229 (332)
T ss_pred cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH-----------HHHHHHhCCCccccC
Confidence 3356899999999986 346889999999999999999999998643211 111111110 111
Q ss_pred C---hhHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 039817 675 G---ATKFERITMVGLWCICPQPTL--RPSMKQVLQM 706 (725)
Q Consensus 675 ~---~~~~~~l~~l~~~cl~~dp~~--RPs~~evl~~ 706 (725)
+ ....+.+.+++.+|+..++.+ |++++|++++
T Consensus 230 p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 230 PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 1 234667888999888654444 6899999888
No 259
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-30 Score=279.54 Aligned_cols=230 Identities=27% Similarity=0.373 Sum_probs=188.4
Q ss_pred ceEEEEEEccc-ccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC-CCCCHHHHHHH
Q 039817 462 EVEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEI 539 (725)
Q Consensus 462 ~~~vavk~l~~-~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i 539 (725)
+.+||||.+.. ...+..++|++|+-+|.+++||||++|+|+|.... ..||++||+.|+|.+|++.+ ..+-.+..+.|
T Consensus 725 KipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw 803 (1177)
T KOG1025|consen 725 KIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNW 803 (1177)
T ss_pred cceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHHHH
Confidence 35889998864 34556789999999999999999999999998876 88999999999999999765 57888999999
Q ss_pred HHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc-ccccCccccchhccc
Q 039817 540 ALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST-MIRGTMGYMAPEWLR 618 (725)
Q Consensus 540 ~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~-~~~gt~~y~aPE~~~ 618 (725)
..|||+||.|||++ +++||||.++|+||.. -..+||.|||+++....+...-.. ...-.+.|||-|.+.
T Consensus 804 ~~QIAkgM~YLe~q---rlVHrdLaaRNVLVks-------P~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~ 873 (1177)
T KOG1025|consen 804 CYQIAKGMKYLEEQ---RLVHRDLAARNVLVKS-------PNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIR 873 (1177)
T ss_pred HHHHHHHHHHHHhc---chhhhhhhhhheeecC-------CCeEEEEecchhhccCcccccccccccccCcHHHHHHHhh
Confidence 99999999999999 9999999999999987 778999999999988765544332 233467899999999
Q ss_pred CCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCC
Q 039817 619 NAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLR 697 (725)
Q Consensus 619 ~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~R 697 (725)
...++.++|||||||.+||++| |..|++....++ +.+.++.-. +-.-|......+..++.+||..|+..|
T Consensus 874 ~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--------I~dlle~ge-RLsqPpiCtiDVy~~mvkCwmid~~~r 944 (1177)
T KOG1025|consen 874 IRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--------IPDLLEKGE-RLSQPPICTIDVYMVMVKCWMIDADSR 944 (1177)
T ss_pred ccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--------hhHHHhccc-cCCCCCCccHHHHHHHHHHhccCcccC
Confidence 9999999999999999999997 777776432211 122222111 123445667788999999999999999
Q ss_pred CCHHHHHHHhcCCC
Q 039817 698 PSMKQVLQMLEGTS 711 (725)
Q Consensus 698 Ps~~evl~~L~~~~ 711 (725)
|+++++...+....
T Consensus 945 p~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 945 PTFKELAEEFSRMA 958 (1177)
T ss_pred ccHHHHHHHHHHHh
Confidence 99999998886543
No 260
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=5.5e-30 Score=273.16 Aligned_cols=238 Identities=21% Similarity=0.228 Sum_probs=183.1
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..|++++.+.+... +..+|+|.+... .......+.+|+.++..++|+||+++++++..++..++||||+++|+|.
T Consensus 12 G~fg~V~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~ 89 (331)
T cd05624 12 GAFGEVAVVKMKHT--ERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLL 89 (331)
T ss_pred CCCeEEEEEEECCC--CCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHH
Confidence 34555555544433 456888887542 2223455889999999999999999999999999999999999999999
Q ss_pred hhhcc-CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+++.+ ...+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.........
T Consensus 90 ~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~-------~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 90 TLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDM-------NGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcC-------CCCEEEEeccceeeccCCCcee
Confidence 99977 46789999999999999999999999 9999999999999987 7889999999998765443333
Q ss_pred ccccccCccccchhcccC-----CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc---CC
Q 039817 602 STMIRGTMGYMAPEWLRN-----APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT---GN 673 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~-----~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 673 (725)
.....|+..|+|||.+.+ ..++.++||||||+++|||++|+.|+...... +........ ..
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----------~~~~~i~~~~~~~~ 228 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-----------ETYGKIMNHEERFQ 228 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH-----------HHHHHHHcCCCccc
Confidence 333568999999999875 46788999999999999999999998643211 111111110 11
Q ss_pred CC---hhHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 039817 674 LG---ATKFERITMVGLWCICPQPTL--RPSMKQVLQM 706 (725)
Q Consensus 674 ~~---~~~~~~l~~l~~~cl~~dp~~--RPs~~evl~~ 706 (725)
++ ...++.+.+++.+|+..++++ |+++++++++
T Consensus 229 ~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 11 134678889999998876554 4688888876
No 261
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=1.4e-30 Score=272.06 Aligned_cols=248 Identities=23% Similarity=0.247 Sum_probs=186.9
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.++.++++.+.-+ +..|++|.+... .....+.+.+|++++++++|+||+++++++..++..++||||++++.|..+
T Consensus 13 ~~~~v~~~~~~~~--~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~ 90 (288)
T cd07833 13 AYGVVLKCRNKAT--GEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELL 90 (288)
T ss_pred CCeeEEEEEeCCC--CcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHH
Confidence 3444555544333 457899987643 233457899999999999999999999999999999999999999888777
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
+.+...+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++.............
T Consensus 91 ~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~-------~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (288)
T cd07833 91 EASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSE-------SGVLKLCDFGFARALRARPASPLTD 160 (288)
T ss_pred HhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECC-------CCCEEEEeeecccccCCCccccccC
Confidence 76667789999999999999999999999 9999999999999987 8899999999998765544322233
Q ss_pred cccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCcccccc----CcchHHHHH-------------
Q 039817 605 IRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN----GMILTDWVL------------- 666 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~----~~~~~~~~~------------- 666 (725)
..++..|+|||++.+. .++.++||||||+++|||++|+.++............ .........
T Consensus 161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07833 161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF 240 (288)
T ss_pred cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccccc
Confidence 4578889999999887 8899999999999999999999888643211000000 000000000
Q ss_pred -----HHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 667 -----YCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 667 -----~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
........+...+..+.+++.+||+.+|++||++++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 241 PEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred CCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 0000001122336789999999999999999999999864
No 262
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-30 Score=249.86 Aligned_cols=255 Identities=24% Similarity=0.311 Sum_probs=205.6
Q ss_pred ccccHHHHHHHhcccCC--------------cceEEEEEEcccccCccHHHHHHHHHHHhccC-cCCccceeeEEEcCCc
Q 039817 444 KVFSYQELREATNVFDG--------------QEVEVAVKQLEKVTGDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNH 508 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~--------------~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~ 508 (725)
...+|.++++-|...-| .++++|||++++..+..+....+|++++.+.+ |+||++|+.+|+++..
T Consensus 71 ~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~ 150 (463)
T KOG0607|consen 71 LSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR 150 (463)
T ss_pred ccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce
Confidence 34568888888865443 34578999999888888999999999999985 9999999999999999
Q ss_pred eeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeec
Q 039817 509 QLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADF 588 (725)
Q Consensus 509 ~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Df 588 (725)
+|||||-|.+|+|..+|.+++.+++.+..++..+|+.||.+||.+ +|.|||+||+|||-... +.---+||+||
T Consensus 151 FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~p----n~vsPvKiCDf 223 (463)
T KOG0607|consen 151 FYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESP----NKVSPVKICDF 223 (463)
T ss_pred EEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCC----CCcCceeeecc
Confidence 999999999999999999999999999999999999999999999 99999999999997652 22445899999
Q ss_pred cCccccC--cCCCcc----ccccccCccccchhccc-----CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccccc
Q 039817 589 GLAKLLK--KDQTRT----STMIRGTMGYMAPEWLR-----NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN 657 (725)
Q Consensus 589 gla~~~~--~~~~~~----~~~~~gt~~y~aPE~~~-----~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~ 657 (725)
.|..-+. .+-+.. ....+|+..|||||+.. ...|+.+.|.||||||||-|++|..||.....++-....
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 8875432 222211 22356889999999763 346899999999999999999999999887665443332
Q ss_pred Cc---chHHHHHHHHHcCCCCh------hHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 039817 658 GM---ILTDWVLYCVRTGNLGA------TKFERITMVGLWCICPQPTLRPSMKQVLQ 705 (725)
Q Consensus 658 ~~---~~~~~~~~~~~~~~~~~------~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 705 (725)
+. .=.+.+.+.++.+.+.- ....+..+++...+..++.+|.++.+++.
T Consensus 304 Ge~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 304 GEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 22 22344555566665432 45667888999999999999999999987
No 263
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=1e-29 Score=265.94 Aligned_cols=221 Identities=23% Similarity=0.220 Sum_probs=182.1
Q ss_pred ceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHH
Q 039817 462 EVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVE 538 (725)
Q Consensus 462 ~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~ 538 (725)
+..+++|.+.... ....+.+.+|++++++++||||+++++++..++..++||||+++++|.+++.+...++...+..
T Consensus 26 ~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~ 105 (290)
T cd05580 26 GKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARF 105 (290)
T ss_pred CCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHH
Confidence 4578888875422 2345678999999999999999999999999999999999999999999998888899999999
Q ss_pred HHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhccc
Q 039817 539 IALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR 618 (725)
Q Consensus 539 i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 618 (725)
++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||+++..... .....++..|+|||.+.
T Consensus 106 ~~~qil~~l~~lH~~---~i~H~dl~p~nili~~-------~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~ 171 (290)
T cd05580 106 YAAQVVLALEYLHSL---DIVYRDLKPENLLLDS-------DGYIKITDFGFAKRVKGR----TYTLCGTPEYLAPEIIL 171 (290)
T ss_pred HHHHHHHHHHHHHHC---CEecCCCCHHHEEECC-------CCCEEEeeCCCccccCCC----CCCCCCCccccChhhhc
Confidence 999999999999998 9999999999999987 788999999999876543 22345888999999998
Q ss_pred CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCC
Q 039817 619 NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRP 698 (725)
Q Consensus 619 ~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP 698 (725)
+...+.++||||||+++++|++|+.|+...... ...... ......++......+.+++.+||+.+|.+||
T Consensus 172 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~ 241 (290)
T cd05580 172 SKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI--------QIYEKI--LEGKVRFPSFFSPDAKDLIRNLLQVDLTKRL 241 (290)
T ss_pred CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHH--hcCCccCCccCCHHHHHHHHHHccCCHHHcc
Confidence 888999999999999999999999998643210 000011 0112234445678899999999999999999
Q ss_pred -----CHHHHHHH
Q 039817 699 -----SMKQVLQM 706 (725)
Q Consensus 699 -----s~~evl~~ 706 (725)
+++|++++
T Consensus 242 ~~~~~~~~~l~~~ 254 (290)
T cd05580 242 GNLKNGVNDIKNH 254 (290)
T ss_pred CcccCCHHHHHcC
Confidence 77777754
No 264
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=6.7e-30 Score=276.34 Aligned_cols=245 Identities=23% Similarity=0.205 Sum_probs=179.7
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcC------Cceeeeeecc
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ------NHQLLVYELM 516 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~lV~e~~ 516 (725)
..+|+.++.+.+...+ ..||||.+... .....+.+.+|+.+++.++|+||+++++++... ...++||||+
T Consensus 34 ~G~~g~V~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~ 111 (364)
T cd07875 34 SGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111 (364)
T ss_pred cCCCeEEEEEEECCCC--cEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCC
Confidence 3445566666554443 46888888643 233456788999999999999999999987643 3579999999
Q ss_pred cCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 517 ~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
++ +|.+++. ..+++..+..++.|+++||.|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 112 ~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~-------~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 112 DA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKS-------DCTLKILDFGLARTAGT 178 (364)
T ss_pred CC-CHHHHHH--hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECC-------CCcEEEEeCCCccccCC
Confidence 75 6777764 3478899999999999999999999 9999999999999987 78999999999986543
Q ss_pred CCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc------cc-Ccc----hHHHH
Q 039817 597 DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL------AN-GMI----LTDWV 665 (725)
Q Consensus 597 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~------~~-~~~----~~~~~ 665 (725)
... .....++..|+|||.+.+..++.++||||||+++|||++|+.||.......... .. ... +....
T Consensus 179 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (364)
T cd07875 179 SFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256 (364)
T ss_pred CCc--ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHH
Confidence 221 223458899999999999999999999999999999999999986432111000 00 000 00000
Q ss_pred HHHHHc-C--------------------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 666 LYCVRT-G--------------------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 666 ~~~~~~-~--------------------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...... . .........+++++.+|++.||.+|||+.|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 0 0001123568899999999999999999999987
No 265
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=6.2e-30 Score=266.85 Aligned_cols=245 Identities=23% Similarity=0.279 Sum_probs=180.6
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.+++++++++.-+ +..|++|.+... .....+.+.+|+.++++++|+||+++++++..++..++||||++ ++|.++
T Consensus 12 ~~~~v~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~ 88 (285)
T cd07861 12 TYGVVYKGRNKKT--GQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKY 88 (285)
T ss_pred CceEEEEEEECCC--CcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHH
Confidence 4555666654433 457888887532 22334678999999999999999999999999999999999998 588888
Q ss_pred hccC---CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 525 LFRQ---EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 525 l~~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++........ .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~-------~~~~~l~dfg~~~~~~~~~~-~ 157 (285)
T cd07861 89 LDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDN-------KGVIKLADFGLARAFGIPVR-V 157 (285)
T ss_pred HhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcC-------CCcEEECcccceeecCCCcc-c
Confidence 7543 4689999999999999999999999 9999999999999987 78999999999876533221 1
Q ss_pred ccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc--------------ccCcchHHHHH
Q 039817 602 STMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL--------------ANGMILTDWVL 666 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 666 (725)
.....++..|+|||.+.+. .++.++||||||++++||++|+.|+.......... .......++..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKN 237 (285)
T ss_pred ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHh
Confidence 1223467889999988654 57899999999999999999999886432110000 00000000000
Q ss_pred HHHHc---C---CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 667 YCVRT---G---NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 667 ~~~~~---~---~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.... . .......+++.+++.+||+.||.+|||+.+|+++
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 238 -TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred -hccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000 0 0011245678899999999999999999999865
No 266
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=1e-29 Score=263.26 Aligned_cols=240 Identities=25% Similarity=0.318 Sum_probs=184.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC----------ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecc
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG----------DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELM 516 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~----------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~ 516 (725)
.++.++.+.+.-+ +..+|+|.++.... ...+.+.+|++++++++|+||+++++++..++..++||||+
T Consensus 13 ~~~~vy~~~~~~~--~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 90 (272)
T cd06629 13 TYGRVYLALNVTT--GEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYV 90 (272)
T ss_pred CceEEEEEeecCC--CceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecC
Confidence 4455555554333 45788887642111 11246889999999999999999999999999999999999
Q ss_pred cCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 517 ~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
++++|.+++.+...+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||+++....
T Consensus 91 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~-------~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 91 PGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDA-------DGICKISDFGISKKSDD 160 (272)
T ss_pred CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcC-------CCeEEEeeccccccccc
Confidence 9999999998888899999999999999999999998 9999999999999987 78999999999986543
Q ss_pred CCCcc-ccccccCccccchhcccCCC--CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCC
Q 039817 597 DQTRT-STMIRGTMGYMAPEWLRNAP--VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGN 673 (725)
Q Consensus 597 ~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (725)
..... .....++..|+|||.+.... ++.++|+||||++++|+++|..|+....... ...+ .........
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-------~~~~-~~~~~~~~~ 232 (272)
T cd06629 161 IYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA-------AMFK-LGNKRSAPP 232 (272)
T ss_pred cccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH-------HHHH-hhccccCCc
Confidence 22111 22345788999999987654 8899999999999999999999985322110 0000 000000111
Q ss_pred C----ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 674 L----GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 674 ~----~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
. .......+.+++.+|++.+|++||++++|+++
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 233 IPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 1 12346789999999999999999999999876
No 267
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.4e-30 Score=278.77 Aligned_cols=180 Identities=23% Similarity=0.283 Sum_probs=148.2
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.+++.+++|.+... +..||+|..... ....|+.++++++|+||+++++++..+...++|+|++. ++|.+++
T Consensus 77 G~~g~Vy~~~~~~~--~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l 147 (357)
T PHA03209 77 GSEGRVFVATKPGQ--PDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYL 147 (357)
T ss_pred CCCeEEEEEEECCC--CceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHH
Confidence 45566666665433 456788865322 24579999999999999999999999999999999996 5888887
Q ss_pred ccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 526 FRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 526 ~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
... ..+++..+..|+.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++...... ....
T Consensus 148 ~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~-------~~~~kl~DfG~a~~~~~~~--~~~~ 215 (357)
T PHA03209 148 TKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFIND-------VDQVCIGDLGAAQFPVVAP--AFLG 215 (357)
T ss_pred HhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECC-------CCCEEEecCccccccccCc--cccc
Confidence 654 6789999999999999999999999 9999999999999987 7889999999997533221 1123
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCC
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTE 646 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~ 646 (725)
..||..|+|||.+.+..++.++||||||+++|||+++..++.
T Consensus 216 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 216 LAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred ccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 458999999999999999999999999999999998766553
No 268
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=1.6e-29 Score=259.18 Aligned_cols=222 Identities=27% Similarity=0.420 Sum_probs=176.2
Q ss_pred ceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC--CCCCHHHHHHH
Q 039817 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ--EIPTWDKRVEI 539 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~~~i 539 (725)
+..+++|.+... ...+.+.+|+.++++++|+|++++++++..+ ..++||||+++++|.+++... ..+++..+..+
T Consensus 29 ~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 105 (254)
T cd05083 29 GQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQF 105 (254)
T ss_pred CCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHH
Confidence 346888887542 2356799999999999999999999998765 478999999999999999754 35789999999
Q ss_pred HHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccC
Q 039817 540 ALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRN 619 (725)
Q Consensus 540 ~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 619 (725)
+.|++.||.|||+. +++||||||+||+++. ++.+||+|||++....... .....+..|+|||.+.+
T Consensus 106 ~~qi~~al~~lH~~---~~~H~dl~p~nili~~-------~~~~kl~Dfg~~~~~~~~~----~~~~~~~~y~~pe~~~~ 171 (254)
T cd05083 106 SLDVAEGMEYLESK---KLVHRDLAARNILVSE-------DGVAKVSDFGLARVGSMGV----DNSKLPVKWTAPEALKH 171 (254)
T ss_pred HHHHHHHHHHHHhC---CeeccccCcceEEEcC-------CCcEEECCCccceeccccC----CCCCCCceecCHHHhcc
Confidence 99999999999998 9999999999999987 7889999999987543221 11224567999999998
Q ss_pred CCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCC
Q 039817 620 APVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRP 698 (725)
Q Consensus 620 ~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP 698 (725)
..++.++|+||||++++||++ |+.|+...... ...+..... .....+...++.+.+++.+|++.+|++||
T Consensus 172 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 242 (254)
T cd05083 172 KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--------EVKECVEKG-YRMEPPEGCPADVYVLMTSCWETEPKKRP 242 (254)
T ss_pred CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--------HHHHHHhCC-CCCCCCCcCCHHHHHHHHHHcCCChhhCc
Confidence 899999999999999999998 88777533211 011111110 01122334567889999999999999999
Q ss_pred CHHHHHHHhcC
Q 039817 699 SMKQVLQMLEG 709 (725)
Q Consensus 699 s~~evl~~L~~ 709 (725)
+++++++.|++
T Consensus 243 ~~~~l~~~l~~ 253 (254)
T cd05083 243 SFHKLREKLEK 253 (254)
T ss_pred CHHHHHHHHcc
Confidence 99999999875
No 269
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=5e-30 Score=276.44 Aligned_cols=245 Identities=24% Similarity=0.233 Sum_probs=179.6
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcC------Cceeeeeecc
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ------NHQLLVYELM 516 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~lV~e~~ 516 (725)
..+|+.++.+.+... +..||||.+... .....+.+.+|+.+++.++|+||+++++++... ...++||||+
T Consensus 27 ~G~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~ 104 (355)
T cd07874 27 SGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELM 104 (355)
T ss_pred ecCCEEEEEEEecCC--CceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhh
Confidence 344556666655433 356888988643 223346788999999999999999999998643 3569999999
Q ss_pred cCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 517 ~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
++ +|.+.+. ..+++..+..++.|+++||.|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 105 ~~-~l~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~-------~~~~kl~Dfg~~~~~~~ 171 (355)
T cd07874 105 DA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKS-------DCTLKILDFGLARTAGT 171 (355)
T ss_pred cc-cHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECC-------CCCEEEeeCcccccCCC
Confidence 76 6666664 3478899999999999999999999 9999999999999987 78999999999986543
Q ss_pred CCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc------cc-Cc----chHHHH
Q 039817 597 DQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL------AN-GM----ILTDWV 665 (725)
Q Consensus 597 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~------~~-~~----~~~~~~ 665 (725)
... .....++..|+|||.+.+..++.++||||||+++|||++|+.||.......... .. .. .+....
T Consensus 172 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 172 SFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred ccc--cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence 221 223458899999999999999999999999999999999999986432111000 00 00 000000
Q ss_pred HHHHHc---------------C------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 666 LYCVRT---------------G------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 666 ~~~~~~---------------~------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...... . .........+++++.+|++.||++|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000 0 0011234578999999999999999999999987
No 270
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.96 E-value=6.9e-30 Score=263.59 Aligned_cols=236 Identities=22% Similarity=0.250 Sum_probs=182.2
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc-----CccHHHHHHHHHHHhccCcCCccceeeEEEcC--CceeeeeecccCC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT-----GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKNG 519 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~e~~~~g 519 (725)
.++.++.+.+..+ +..|+||.+.... ....+.+.+|++++++++|+||+++++++.+. ...++||||++++
T Consensus 14 ~~g~v~~~~~~~~--~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~ 91 (265)
T cd06652 14 AFGRVYLCYDADT--GRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGG 91 (265)
T ss_pred CceEEEEEEEcCC--CcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCC
Confidence 4555555555433 3578888764221 12245788999999999999999999998764 4678999999999
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 520 sL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
+|.+++.+...+++....+++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++.......
T Consensus 92 ~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~-------~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 92 SIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDS-------VGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecC-------CCCEEECcCccccccccccc
Confidence 9999998777789999999999999999999999 9999999999999987 78899999999886532211
Q ss_pred --ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH---cCCC
Q 039817 600 --RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR---TGNL 674 (725)
Q Consensus 600 --~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 674 (725)
.......++..|+|||.+.+..++.++||||||+++|||++|+.|+...... .. ...... ....
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----------~~-~~~~~~~~~~~~~ 230 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----------AA-IFKIATQPTNPVL 230 (265)
T ss_pred cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----------HH-HHHHhcCCCCCCC
Confidence 1112244888999999998888999999999999999999999998643111 00 111111 1223
Q ss_pred ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 675 GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 675 ~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+......+.+++.+|+. +|++||+++||+++
T Consensus 231 ~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 231 PPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred chhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 44556678889999985 89999999999875
No 271
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.96 E-value=8.4e-30 Score=266.31 Aligned_cols=247 Identities=26% Similarity=0.296 Sum_probs=178.6
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhcc---CcCCccceeeEEEc-----CCceeeeee
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRT---HHKNLVQLLGFCIE-----QNHQLLVYE 514 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~-----~~~~~lV~e 514 (725)
..+++++++|.+..+ +..||+|.+.... ......+.+|+++++++ +|+||+++++++.. ....++|||
T Consensus 10 ~g~~g~v~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e 87 (288)
T cd07863 10 VGAYGTVYKARDPHS--GHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFE 87 (288)
T ss_pred ecCCeEEEEEEECCC--CcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEc
Confidence 345566666665544 4578888875422 22234567788877765 69999999999864 345789999
Q ss_pred cccCCChhhhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcc
Q 039817 515 LMKNGTLSAFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAK 592 (725)
Q Consensus 515 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~ 592 (725)
|+++ +|.+++.+. ..+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||+++
T Consensus 88 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~-------~~~~kl~dfg~~~ 156 (288)
T cd07863 88 HVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTS-------GGQVKLADFGLAR 156 (288)
T ss_pred cccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC-------CCCEEECccCccc
Confidence 9985 888888654 3589999999999999999999999 9999999999999987 7889999999998
Q ss_pred ccCcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc-----cCcchHHHHHH
Q 039817 593 LLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA-----NGMILTDWVLY 667 (725)
Q Consensus 593 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 667 (725)
....... .....++..|+|||.+.+..++.++||||||+++|||++|+.++........... .......+...
T Consensus 157 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07863 157 IYSCQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 234 (288)
T ss_pred cccCccc--CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence 6643221 1224578899999999988999999999999999999999998854321110000 00000000000
Q ss_pred HH-HcC-----------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 668 CV-RTG-----------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 668 ~~-~~~-----------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.. ... .......+.+.+++.+|++.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 235 VTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 000 0111345678899999999999999999999865
No 272
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=1.3e-29 Score=264.58 Aligned_cols=247 Identities=23% Similarity=0.255 Sum_probs=184.0
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.++.+++|++.-+ +..|++|.+.... ....+.+.+|+.++++++|+||+++++++..+...++||||+ +++|.++
T Consensus 12 ~~~~v~~~~~~~~--~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~ 88 (286)
T cd07832 12 AHGIVFKAKDRET--GETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEV 88 (286)
T ss_pred CCcEEEEEEECCC--CceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHH
Confidence 3445555554333 4578888876433 334568999999999999999999999999999999999999 9999999
Q ss_pred hccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 525 LFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 525 l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
+... ..+++..+..++.|+++||.|||+. +++|+||||+||+++. ++.++|+|||++............
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~-------~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 89 LRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISA-------DGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcC-------CCcEEEeeeeecccccCCCCCccc
Confidence 8654 6689999999999999999999999 9999999999999987 788999999999876544322223
Q ss_pred ccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccc---c--ccCc---------chHHHHHHH
Q 039817 604 MIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT---L--ANGM---------ILTDWVLYC 668 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~---~--~~~~---------~~~~~~~~~ 668 (725)
...++..|+|||.+.+. .++.++||||+|++++||++|+.++......... . .... .+.++....
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT 238 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence 34588899999998654 4689999999999999999997766433210000 0 0000 000000000
Q ss_pred HHc------CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 669 VRT------GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 669 ~~~------~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
... ........+.+.+++.+|++.+|++|||+++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 00111335788999999999999999999999876
No 273
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.96 E-value=5.9e-31 Score=253.50 Aligned_cols=242 Identities=22% Similarity=0.290 Sum_probs=198.3
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
+...+|+.+++|....+| ..||||.+.- ..+.+++..|+.+|.+.+.+++|++||.+.....+++|||||..||..
T Consensus 41 LGEGSYGSV~KAIH~EsG--~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiS 116 (502)
T KOG0574|consen 41 LGEGSYGSVHKAIHRESG--HVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSIS 116 (502)
T ss_pred hcCCcchHHHHHHHhccC--cEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHH
Confidence 456789999999988765 5789998853 456889999999999999999999999999999999999999999999
Q ss_pred hhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+.+..+ +.+++..+..++...++||+|||.. .-+|||||+.||||+. ++.+||+|||.+-.+...-. .
T Consensus 117 DI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT-------~G~AKLADFGVAGQLTDTMA-K 185 (502)
T KOG0574|consen 117 DIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNT-------DGIAKLADFGVAGQLTDTMA-K 185 (502)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcc-------cchhhhhhccccchhhhhHH-h
Confidence 998654 7899999999999999999999998 8899999999999987 89999999999976543222 2
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFER 681 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (725)
...+.||+.|||||+++.-.|+.++||||||+...||.-|++|+..-..-.... +..... -..-.-+......
T Consensus 186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF---MIPT~P----PPTF~KPE~WS~~ 258 (502)
T KOG0574|consen 186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF---MIPTKP----PPTFKKPEEWSSE 258 (502)
T ss_pred hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE---eccCCC----CCCCCChHhhhhH
Confidence 223569999999999999999999999999999999999999986432211000 000000 0001123356778
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+.++++.||-+.|++|-|+.++++|
T Consensus 259 F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 259 FNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 9999999999999999999998876
No 274
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=1.3e-29 Score=268.34 Aligned_cols=236 Identities=19% Similarity=0.184 Sum_probs=178.7
Q ss_pred cceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC--CCCCHHHH
Q 039817 461 QEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ--EIPTWDKR 536 (725)
Q Consensus 461 ~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~~~ 536 (725)
.+..||||.+... .....+.+.+|++++++++|+||+++++++...+..+++|||+++++|.+++.+. ..+++...
T Consensus 24 ~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~ 103 (314)
T cd08216 24 TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAI 103 (314)
T ss_pred CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHH
Confidence 3567899987643 3445578999999999999999999999999999999999999999999999754 45788999
Q ss_pred HHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc------cccccccCcc
Q 039817 537 VEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR------TSTMIRGTMG 610 (725)
Q Consensus 537 ~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~------~~~~~~gt~~ 610 (725)
..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||.+......... ......++..
T Consensus 104 ~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~-------~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (314)
T cd08216 104 AFILKDVLNALDYIHSK---GFIHRSVKASHILLSG-------DGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLP 173 (314)
T ss_pred HHHHHHHHHHHHHHHHC---CeecCCCCcceEEEec-------CCceEEecCccceeecccccccccccccccccccccc
Confidence 99999999999999999 9999999999999987 789999999988754322111 1122346778
Q ss_pred ccchhcccC--CCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccccc----------CcchH--------------HH
Q 039817 611 YMAPEWLRN--APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN----------GMILT--------------DW 664 (725)
Q Consensus 611 y~aPE~~~~--~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~----------~~~~~--------------~~ 664 (725)
|+|||.+.. ..++.++||||||++++||++|+.||............ ..... ..
T Consensus 174 y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (314)
T cd08216 174 WLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHP 253 (314)
T ss_pred ccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccccccccc
Confidence 999999875 35889999999999999999999998643211100000 00000 00
Q ss_pred HHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 665 VLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 665 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.................+.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 254 NNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred chhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000000111122345678999999999999999999999975
No 275
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.96 E-value=4.9e-30 Score=267.80 Aligned_cols=242 Identities=23% Similarity=0.246 Sum_probs=180.9
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhcc-CcCCccceeeEEE-----cCCceeeeeecccC
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCI-----EQNHQLLVYELMKN 518 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~-----~~~~~~lV~e~~~~ 518 (725)
...++.++++.+...+ ..+++|.+... .....++.+|+.+++++ +|+||+++++++. .++..++||||+++
T Consensus 28 ~g~~~~vy~~~~~~~~--~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~ 104 (286)
T cd06638 28 KGTYGKVFKVLNKKNG--SKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNG 104 (286)
T ss_pred cCCCcEEEEEEECCCC--ceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCC
Confidence 3455666666655443 46788877543 22346788999999999 6999999999884 34568999999999
Q ss_pred CChhhhhcc----CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcccc
Q 039817 519 GTLSAFLFR----QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL 594 (725)
Q Consensus 519 gsL~~~l~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~ 594 (725)
++|.+++.. ...+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||+++..
T Consensus 105 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~-------~~~~kl~dfg~~~~~ 174 (286)
T cd06638 105 GSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTT-------EGGVKLVDFGVSAQL 174 (286)
T ss_pred CCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECC-------CCCEEEccCCceeec
Confidence 999988752 35678899999999999999999998 9999999999999987 778999999998865
Q ss_pred CcCCCccccccccCccccchhcccC-----CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH
Q 039817 595 KKDQTRTSTMIRGTMGYMAPEWLRN-----APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV 669 (725)
Q Consensus 595 ~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (725)
...... .....|+..|+|||.+.. ..++.++||||||+++|||++|+.|+........ .........
T Consensus 175 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-------~~~~~~~~~ 246 (286)
T cd06638 175 TSTRLR-RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-------LFKIPRNPP 246 (286)
T ss_pred ccCCCc-cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-------HhhccccCC
Confidence 432221 122358899999998753 4578899999999999999999999864321110 000000000
Q ss_pred HcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 670 RTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 670 ~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
.....+......+.+++.+|++.+|++|||+.||++++
T Consensus 247 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 247 PTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred CcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00011222356799999999999999999999999864
No 276
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.96 E-value=1.6e-29 Score=260.47 Aligned_cols=239 Identities=26% Similarity=0.323 Sum_probs=191.8
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC-ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.++.+++|++..+ +..++||.+..... ...+.+.+|++.+.+++|+||+++++++..++..++||||+++++|.+++
T Consensus 13 ~~~~v~~~~~~~~--~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 90 (264)
T cd06623 13 SSGVVYKVRHKPT--GKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLL 90 (264)
T ss_pred CCeEEEEEEEcCC--CcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHH
Confidence 3444455554443 45678888765433 45678999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhhhhhc-ccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 526 FRQEIPTWDKRVEIALGIARGLLYLHE-ECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 526 ~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
.....++...+..++.|+++||.|||+ . +++|+||+|+||+++. ++.++|+|||++.......... ..
T Consensus 91 ~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~-------~~~~~l~df~~~~~~~~~~~~~-~~ 159 (264)
T cd06623 91 KKVGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINS-------KGEVKIADFGISKVLENTLDQC-NT 159 (264)
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECC-------CCCEEEccCccceecccCCCcc-cc
Confidence 887889999999999999999999999 8 9999999999999987 7899999999998765433222 23
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChh-HHHH
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGAT-KFER 681 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~ 681 (725)
..++..|+|||.+.+..++.++||||||+++|||++|+.|+...... ...+....... ....+.. .++.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (264)
T cd06623 160 FVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--------SFFELMQAICDGPPPSLPAEEFSPE 231 (264)
T ss_pred eeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--------CHHHHHHHHhcCCCCCCCcccCCHH
Confidence 34788999999999889999999999999999999999998654321 11111111111 1122333 5678
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 682 ITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+.+++.+|++.+|++||++.|++++
T Consensus 232 l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 232 FRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHHHccCChhhCCCHHHHHhC
Confidence 9999999999999999999999975
No 277
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.96 E-value=2.5e-29 Score=256.57 Aligned_cols=236 Identities=25% Similarity=0.358 Sum_probs=188.9
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhcc
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR 527 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~ 527 (725)
++.++++++.. .+..+++|.+........+.+.+|++.+++++|+|++++++++..+...++++||+++++|.+++..
T Consensus 13 ~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 90 (253)
T cd05122 13 FGEVYKARHKR--TGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKS 90 (253)
T ss_pred ceEEEEEEECC--CCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhh
Confidence 34444444433 3457888988765555677899999999999999999999999999999999999999999999977
Q ss_pred C-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccc
Q 039817 528 Q-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIR 606 (725)
Q Consensus 528 ~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 606 (725)
. ..+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||.+........ .....
T Consensus 91 ~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~-------~~~~~l~d~~~~~~~~~~~~--~~~~~ 158 (253)
T cd05122 91 TNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTS-------DGEVKLIDFGLSAQLSDTKA--RNTMV 158 (253)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEcc-------CCeEEEeecccccccccccc--cccee
Confidence 6 6789999999999999999999998 9999999999999987 78899999999987654432 22345
Q ss_pred cCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChh--HHHHHHH
Q 039817 607 GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGAT--KFERITM 684 (725)
Q Consensus 607 gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~ 684 (725)
++..|+|||.+.+..++.++||||||+++++|++|+.|+....... ....... ......... ....+.+
T Consensus 159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~ 229 (253)
T cd05122 159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK--------ALFKIAT-NGPPGLRNPEKWSDEFKD 229 (253)
T ss_pred cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH--------HHHHHHh-cCCCCcCcccccCHHHHH
Confidence 7889999999988889999999999999999999999886432111 0000000 101111112 2578999
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 039817 685 VGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 685 l~~~cl~~dp~~RPs~~evl~~ 706 (725)
++.+|++.||++|||+.|++++
T Consensus 230 ~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 230 FLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred HHHHHccCChhhCCCHHHHhcC
Confidence 9999999999999999999875
No 278
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.96 E-value=5.3e-30 Score=262.91 Aligned_cols=237 Identities=24% Similarity=0.364 Sum_probs=186.2
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.+++++++.+..++ ..+++|.+... .....+.+.+|++++++++|+||+++++.+..++..++|+||+++++|.++
T Consensus 12 ~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 89 (257)
T cd08225 12 SFGKIYLAKAKSDS--EHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKR 89 (257)
T ss_pred CcceEEEEEEcCCC--ceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHH
Confidence 44555655554444 45788877532 234456788999999999999999999999999999999999999999999
Q ss_pred hccCC--CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 525 LFRQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 525 l~~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+.+.. .+++..+..++.|+++||.|||+. +++|+||||+||+++.+ ...+||+|||.+......... .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~------~~~~~l~d~~~~~~~~~~~~~-~ 159 (257)
T cd08225 90 INRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKN------GMVAKLGDFGIARQLNDSMEL-A 159 (257)
T ss_pred HHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCC------CCeEEecccccchhccCCccc-c
Confidence 97643 579999999999999999999998 99999999999999862 346799999999866433221 1
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCChhHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGATKFE 680 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 680 (725)
....|+..|+|||.+.+..++.++||||||++++||++|+.|+..... .+........ .........
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 228 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-----------HQLVLKICQGYFAPISPNFSR 228 (257)
T ss_pred cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----------HHHHHHHhcccCCCCCCCCCH
Confidence 223488899999999888899999999999999999999999853321 1122221111 112234456
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 681 RITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+.+++.+|++.+|++|||+.|++++
T Consensus 229 ~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 229 DLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHHHHHHHhccChhhCcCHHHHhhC
Confidence 89999999999999999999999875
No 279
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.96 E-value=3.4e-29 Score=263.08 Aligned_cols=246 Identities=23% Similarity=0.266 Sum_probs=182.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCc-----cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGD-----GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~-----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
.++.++++.+..+ +..|+||.+...... ....+..|++++++++|+||+++++++.+++..++||||+ +++|
T Consensus 12 ~~~~vy~~~~~~~--~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L 88 (298)
T cd07841 12 TYAVVYKARDKET--GRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDL 88 (298)
T ss_pred cccEEEEEEECCC--CcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCH
Confidence 4455555554433 457888888643322 3456788999999999999999999999999999999999 8999
Q ss_pred hhhhccCC-CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 522 SAFLFRQE-IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 522 ~~~l~~~~-~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
.+++.... .+++..+..++.|+++||.|||+. +++|+||+|+||+++. ++.+||+|||+++........
T Consensus 89 ~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~-------~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 89 EKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIAS-------DGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcC-------CCCEEEccceeeeeccCCCcc
Confidence 99998775 789999999999999999999999 9999999999999987 789999999999876543221
Q ss_pred cccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc--c---ccCcchHHHHH-----HH-
Q 039817 601 TSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT--L---ANGMILTDWVL-----YC- 668 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~--~---~~~~~~~~~~~-----~~- 668 (725)
. ....++..|+|||.+.+ ..++.++||||||++++||++|..++......... . ........+.. ..
T Consensus 159 ~-~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T cd07841 159 M-THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV 237 (298)
T ss_pred c-cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc
Confidence 1 22236778999998854 46789999999999999999997766533211000 0 00000000000 00
Q ss_pred --HHcCC-----CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 669 --VRTGN-----LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 669 --~~~~~-----~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..... ........+.+++.+||+.+|++|||++||+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000 112335678999999999999999999999996
No 280
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.96 E-value=1.1e-29 Score=265.89 Aligned_cols=236 Identities=24% Similarity=0.285 Sum_probs=180.2
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhcc-CcCCccceeeEEEcC-----CceeeeeecccCC
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQ-----NHQLLVYELMKNG 519 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~-----~~~~lV~e~~~~g 519 (725)
-+|+.+++++...+ +..+++|.+.... .....+.+|+.++.++ +|+|++++++++... +..++||||++++
T Consensus 33 g~~~~vy~~~~~~~--~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~ 109 (291)
T cd06639 33 GTYGKVYKVTNKKD--GSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGG 109 (291)
T ss_pred CCCeEEEEEEECCC--CCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCC
Confidence 34555666655433 4578888875432 2346788999999998 899999999998754 3589999999999
Q ss_pred Chhhhhcc----CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccC
Q 039817 520 TLSAFLFR----QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLK 595 (725)
Q Consensus 520 sL~~~l~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~ 595 (725)
+|.+++.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++....
T Consensus 110 sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~-------~~~~kl~dfg~~~~~~ 179 (291)
T cd06639 110 SVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTT-------EGGVKLVDFGVSAQLT 179 (291)
T ss_pred cHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcC-------CCCEEEeecccchhcc
Confidence 99998853 35689999999999999999999998 9999999999999987 7789999999988654
Q ss_pred cCCCccccccccCccccchhcccCC-----CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH
Q 039817 596 KDQTRTSTMIRGTMGYMAPEWLRNA-----PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR 670 (725)
Q Consensus 596 ~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (725)
..... .....++..|+|||.+... .++.++||||||+++|||++|+.|+....... .+.....
T Consensus 180 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~-----------~~~~~~~ 247 (291)
T cd06639 180 STRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK-----------TLFKIPR 247 (291)
T ss_pred ccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH-----------HHHHHhc
Confidence 32221 1223478899999987643 36899999999999999999999986432110 1111111
Q ss_pred cC----CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 671 TG----NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 671 ~~----~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.. ..+......+.+++.+|++.+|++||++.|++++
T Consensus 248 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 248 NPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred CCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 10 1122345679999999999999999999999875
No 281
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=1.4e-29 Score=260.67 Aligned_cols=227 Identities=23% Similarity=0.270 Sum_probs=182.9
Q ss_pred ceEEEEEEcccccC---ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHH
Q 039817 462 EVEVAVKQLEKVTG---DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVE 538 (725)
Q Consensus 462 ~~~vavk~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~ 538 (725)
+..+++|.+..... ...+.+.+|++++++++|+||+++++.+..+...++||||+++++|.+++.+...+++..+..
T Consensus 18 ~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 97 (265)
T cd05579 18 GDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARI 97 (265)
T ss_pred CCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHH
Confidence 45789998864333 445678999999999999999999999999999999999999999999998877899999999
Q ss_pred HHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC-------ccccccccCccc
Q 039817 539 IALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT-------RTSTMIRGTMGY 611 (725)
Q Consensus 539 i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~-------~~~~~~~gt~~y 611 (725)
++.|++.||+|||+. +++|+||+|+||+++. ++.+||+|||++........ .......++..|
T Consensus 98 i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~-------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
T cd05579 98 YIAEIVLALEYLHSN---GIIHRDLKPDNILIDS-------NGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDY 167 (265)
T ss_pred HHHHHHHHHHHHHHc---CeecCCCCHHHeEEcC-------CCCEEEEecccchhcccCcccccccccccccCcccCccc
Confidence 999999999999999 9999999999999987 78999999999876433321 112234477889
Q ss_pred cchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCCCChhH--HHHHHHHHHH
Q 039817 612 MAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGNLGATK--FERITMVGLW 688 (725)
Q Consensus 612 ~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~l~~l~~~ 688 (725)
+|||.......+.++||||||++++||++|+.|+...... +....... ....+... ...+.+++.+
T Consensus 168 ~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 236 (265)
T cd05579 168 IAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-----------EIFQNILNGKIEWPEDVEVSDEAIDLISK 236 (265)
T ss_pred cCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHhcCCcCCCccccCCHHHHHHHHH
Confidence 9999998888999999999999999999999998643211 11111111 11122222 6788999999
Q ss_pred ccCCCCCCCCCHHHHHHHhcC
Q 039817 689 CICPQPTLRPSMKQVLQMLEG 709 (725)
Q Consensus 689 cl~~dp~~RPs~~evl~~L~~ 709 (725)
|++.+|++|||+.++.+.|+.
T Consensus 237 ~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 237 LLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred HhcCCHhhcCCCccHHHHhcC
Confidence 999999999999766666653
No 282
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96 E-value=5.2e-30 Score=267.33 Aligned_cols=246 Identities=22% Similarity=0.232 Sum_probs=179.7
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.++.++++.+.-++ ..+++|.+... .......+.+|++++++++|+||+++++++.+.+..++|+||+++ +|.++
T Consensus 12 ~~~~vy~~~~~~~g--~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~ 88 (284)
T cd07839 12 TYGTVFKAKNRETH--EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKY 88 (284)
T ss_pred CCeEEEEEEECCCC--cEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC-CHHHH
Confidence 34555556554444 46788877532 223345688999999999999999999999999999999999985 78887
Q ss_pred hcc-CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 525 LFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 525 l~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
+.. ...+++..+..++.|+++||.|||+. +++|+||||+||+++. ++.+||+|||+++........ ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~-------~~~~~l~dfg~~~~~~~~~~~-~~ 157 (284)
T cd07839 89 FDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINK-------NGELKLADFGLARAFGIPVRC-YS 157 (284)
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcC-------CCcEEECccchhhccCCCCCC-cC
Confidence 754 46789999999999999999999999 9999999999999987 788999999999865432211 12
Q ss_pred ccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc------cCcchHHHHH--H---HHHc
Q 039817 604 MIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA------NGMILTDWVL--Y---CVRT 671 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~------~~~~~~~~~~--~---~~~~ 671 (725)
...++..|+|||.+.+. .++.++||||||+++|||++|+.|+........... .......+.. . ....
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY 237 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence 23467899999998764 478999999999999999999988643221110000 0000000000 0 0000
Q ss_pred C---------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 672 G---------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 672 ~---------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
. .......+.+.+++.+||+.||.+|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 238 PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0 0011235678899999999999999999999875
No 283
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.96 E-value=1.7e-29 Score=263.70 Aligned_cols=222 Identities=25% Similarity=0.371 Sum_probs=180.9
Q ss_pred ceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCC-CCCHHHHHHHH
Q 039817 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQE-IPTWDKRVEIA 540 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~l~~~~~~~i~ 540 (725)
+..+++|.+..... ..+.+.+|++.+++++|+|++++++.+...+..++|+||+++++|.+++.... .+++..+..++
T Consensus 44 ~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~ 122 (286)
T cd06614 44 GKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVC 122 (286)
T ss_pred CcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHH
Confidence 45788888865433 56789999999999999999999999999999999999999999999998776 89999999999
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCC
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 620 (725)
.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++........ ......++..|+|||.+.+.
T Consensus 123 ~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~-------~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~ 191 (286)
T cd06614 123 REVLQGLEYLHSQ---NVIHRDIKSDNILLSK-------DGSVKLADFGFAAQLTKEKS-KRNSVVGTPYWMAPEVIKRK 191 (286)
T ss_pred HHHHHHHHHHHhC---CeeeCCCChhhEEEcC-------CCCEEECccchhhhhccchh-hhccccCCcccCCHhHhcCC
Confidence 9999999999998 9999999999999987 78899999999875543221 11223477889999999888
Q ss_pred CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC--CC--ChhHHHHHHHHHHHccCCCCCC
Q 039817 621 PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG--NL--GATKFERITMVGLWCICPQPTL 696 (725)
Q Consensus 621 ~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~l~~l~~~cl~~dp~~ 696 (725)
.++.++||||||+++|+|++|+.|+....... ......... .. .......+.+++.+|++.+|.+
T Consensus 192 ~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 260 (286)
T cd06614 192 DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-----------ALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEK 260 (286)
T ss_pred CCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-----------HHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhh
Confidence 89999999999999999999999876432110 011111111 11 1124578999999999999999
Q ss_pred CCCHHHHHHH
Q 039817 697 RPSMKQVLQM 706 (725)
Q Consensus 697 RPs~~evl~~ 706 (725)
||++.+++++
T Consensus 261 Rpt~~~il~~ 270 (286)
T cd06614 261 RPSAEELLQH 270 (286)
T ss_pred CcCHHHHhhC
Confidence 9999999864
No 284
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=2.3e-29 Score=262.97 Aligned_cols=240 Identities=24% Similarity=0.316 Sum_probs=182.0
Q ss_pred HHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcC--CceeeeeecccCCChhhhh
Q 039817 449 QELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 449 ~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~e~~~~gsL~~~l 525 (725)
++++.+.+.. .+..+++|.+.... ......+.+|++++++++|+||+++++++... +..++||||+++++|.+++
T Consensus 15 ~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 92 (287)
T cd06621 15 GSVTKCRLKN--TGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIY 92 (287)
T ss_pred eEEEEEEECC--CCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHH
Confidence 3344444332 34678888876432 23467799999999999999999999998653 4689999999999999886
Q ss_pred cc----CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 526 FR----QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 526 ~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.. ...++...+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++........
T Consensus 93 ~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~-------~~~~~l~dfg~~~~~~~~~~-- 160 (287)
T cd06621 93 KKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTR-------KGQVKLCDFGVSGELVNSLA-- 160 (287)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEec-------CCeEEEeecccccccccccc--
Confidence 53 34578899999999999999999999 9999999999999987 77899999999875533221
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH---HcCCCC--h
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV---RTGNLG--A 676 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~ 676 (725)
....++..|+|||.+.+..++.++||||||+++|||++|+.|+........ .......++.... ...... .
T Consensus 161 -~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd06621 161 -GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL---GPIELLSYIVNMPNPELKDEPGNGI 236 (287)
T ss_pred -ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC---ChHHHHHHHhcCCchhhccCCCCCC
Confidence 123477889999999988999999999999999999999999875432100 0111111111100 000111 2
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...+.+.+++.+||+.+|.+|||+.||+++
T Consensus 237 ~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 237 KWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred chHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 346789999999999999999999999985
No 285
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=6.6e-30 Score=262.55 Aligned_cols=236 Identities=26% Similarity=0.247 Sum_probs=190.0
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
.|+.++.+.+..+ +..+++|.+.... ....+.+.+|++++++++||||+++++.+.+++..++|+||+++++|.+
T Consensus 12 ~~~~v~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 89 (258)
T cd05578 12 AFGKVCIVQKRDT--KKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRY 89 (258)
T ss_pred CCceEEEEEEccC--CcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHH
Confidence 4555566655433 3468888876432 2346789999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 524 ~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
++.....+++..+..++.|+++||.|||+. +++|+||+|+||++++ ++.++|+|||++........ ..
T Consensus 90 ~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~-------~~~~~l~d~~~~~~~~~~~~--~~ 157 (258)
T cd05578 90 HLSQKVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDE-------QGHVHITDFNIATKVTPDTL--TT 157 (258)
T ss_pred HHHhcCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcC-------CCCEEEeecccccccCCCcc--cc
Confidence 998777889999999999999999999998 9999999999999987 78899999999886544321 12
Q ss_pred ccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH--HcCCCChhHHHH
Q 039817 604 MIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV--RTGNLGATKFER 681 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 681 (725)
...++..|+|||.+.+..++.++|+||||+++|+|++|+.|+....... .+...... .....+...+..
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 228 (258)
T cd05578 158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI---------RDQIRAKQETADVLYPATWSTE 228 (258)
T ss_pred ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH---------HHHHHHHhccccccCcccCcHH
Confidence 3447889999999988889999999999999999999999987543211 11111111 223445556789
Q ss_pred HHHHHHHccCCCCCCCCCH--HHHHH
Q 039817 682 ITMVGLWCICPQPTLRPSM--KQVLQ 705 (725)
Q Consensus 682 l~~l~~~cl~~dp~~RPs~--~evl~ 705 (725)
+.+++.+||+.||.+||++ +|+++
T Consensus 229 ~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 229 AIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred HHHHHHHHccCChhHcCCccHHHHhc
Confidence 9999999999999999999 66553
No 286
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.96 E-value=5.9e-30 Score=267.11 Aligned_cols=247 Identities=22% Similarity=0.257 Sum_probs=183.6
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC--ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG--DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.++.++++.+.. .+..+++|.+..... ...+.+.+|++++++++|+||+++++++..++..++||||+++++|.++
T Consensus 13 ~~~~vy~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~ 90 (286)
T cd07846 13 SYGMVMKCKHKE--TGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDL 90 (286)
T ss_pred CCeEEEEEEECC--CCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHH
Confidence 344555555432 346789998754322 2356788999999999999999999999999999999999999999988
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
......+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++........ ....
T Consensus 91 ~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~-------~~~~~l~dfg~~~~~~~~~~-~~~~ 159 (286)
T cd07846 91 EKYPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQ-------SGVVKLCDFGFARTLAAPGE-VYTD 159 (286)
T ss_pred HhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECC-------CCcEEEEeeeeeeeccCCcc-ccCc
Confidence 87766789999999999999999999998 9999999999999987 78999999999886544322 1222
Q ss_pred cccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc--cc-cCcchHHHHHHHHH---------c
Q 039817 605 IRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT--LA-NGMILTDWVLYCVR---------T 671 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~---------~ 671 (725)
..++..|+|||++.+ ..++.++||||||++++||++|+.++......+.. .. ....+......... .
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T cd07846 160 YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRL 239 (286)
T ss_pred ccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccc
Confidence 347889999999875 45788999999999999999999888643211000 00 00000000000000 0
Q ss_pred CC---------CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 672 GN---------LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 672 ~~---------~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.. ......+.+.+++.+||+.+|++||++++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 240 PEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred ccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00 011335679999999999999999999999875
No 287
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=2.2e-29 Score=262.98 Aligned_cols=237 Identities=23% Similarity=0.329 Sum_probs=183.4
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
|+.++.+.+.. .+..+|+|.+... .......+.+|++++++++|+||+++++.+..++..++||||+++++|..++.
T Consensus 14 ~g~v~~~~~~~--~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 91 (286)
T cd06622 14 YGSVYKVLHRP--TGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYA 91 (286)
T ss_pred CeEEEEEEEcC--CCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHH
Confidence 44444444332 3457888877543 23335679999999999999999999999999999999999999999999987
Q ss_pred cC---CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 527 RQ---EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 527 ~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
.. ..+++..+..++.|++.||.|||+. .+++|+||||+||+++. ++.+||+|||++........ .
T Consensus 92 ~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~-------~~~~~l~dfg~~~~~~~~~~---~ 159 (286)
T cd06622 92 GGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNG-------NGQVKLCDFGVSGNLVASLA---K 159 (286)
T ss_pred hccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECC-------CCCEEEeecCCcccccCCcc---c
Confidence 64 3789999999999999999999963 28999999999999987 78899999999876533221 2
Q ss_pred ccccCccccchhcccCC------CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCC
Q 039817 604 MIRGTMGYMAPEWLRNA------PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLG 675 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~------~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 675 (725)
...++..|+|||.+.+. .++.++||||||+++|||++|+.|+...... .....+..... ....+
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~ 231 (286)
T cd06622 160 TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA--------NIFAQLSAIVDGDPPTLP 231 (286)
T ss_pred cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh--------hHHHHHHHHhhcCCCCCC
Confidence 23477889999998544 3588999999999999999999998643211 11111111111 12344
Q ss_pred hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 676 ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 676 ~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
....+.+.+++.+|++.+|++||++++++.+
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 232 SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 4567889999999999999999999999985
No 288
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.96 E-value=1.4e-29 Score=279.51 Aligned_cols=243 Identities=22% Similarity=0.216 Sum_probs=174.0
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcC--------Cceeeeeeccc
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--------NHQLLVYELMK 517 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------~~~~lV~e~~~ 517 (725)
.+|+.|++|.+... +..||||.+... .....+|+.++++++|+|||++++++... ...++||||++
T Consensus 77 G~fg~Vy~~~~~~~--~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~ 150 (440)
T PTZ00036 77 GSFGVVYEAICIDT--SEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP 150 (440)
T ss_pred CCCEEEEEEEECCC--CCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCC
Confidence 34555665554433 357899987532 22345799999999999999999986432 24668999998
Q ss_pred CCChhhhhc----cCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 518 NGTLSAFLF----RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 518 ~gsL~~~l~----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
+ +|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.+ .+.+||+|||+++.
T Consensus 151 ~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~------~~~vkL~DFGla~~ 220 (440)
T PTZ00036 151 Q-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPN------THTLKLCDFGSAKN 220 (440)
T ss_pred c-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCC------CCceeeeccccchh
Confidence 5 6766654 346789999999999999999999999 99999999999999862 45799999999986
Q ss_pred cCcCCCccccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc----cCcchHHHHHHH
Q 039817 594 LKKDQTRTSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA----NGMILTDWVLYC 668 (725)
Q Consensus 594 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 668 (725)
...... .....|++.|+|||.+.+. .++.++||||||+++|||++|..||........... ......+.....
T Consensus 221 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~ 298 (440)
T PTZ00036 221 LLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEM 298 (440)
T ss_pred ccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 543322 1224578999999998754 689999999999999999999999865422110000 000000000000
Q ss_pred ---HHc------------CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 669 ---VRT------------GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 669 ---~~~------------~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
... ..++...++++.+|+.+||+.||.+|||+.|++++
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 299 NPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred chhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 000 01122345678999999999999999999999965
No 289
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-30 Score=267.55 Aligned_cols=232 Identities=25% Similarity=0.317 Sum_probs=185.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCccH---HHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGE---KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~---~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
+|+.||=|.+..+ ...||||++.-.-.+.. ..++.|++.|.+++|||+|.+.|++..+...+||||||-| |-.|
T Consensus 38 SFGAVYfArd~~n--~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG-SAsD 114 (948)
T KOG0577|consen 38 SFGAVYFARDVRN--SEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASD 114 (948)
T ss_pred ccceeEEeeccCc--cceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc-cHHH
Confidence 4555555555443 35899999864433333 3578999999999999999999999999999999999975 7777
Q ss_pred hhcc-CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 524 FLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 524 ~l~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
.+.- ++++-+..+..|..+.+.||+|||+. +.||||||+.||||++ .+.|||+|||.|.+....
T Consensus 115 lleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse-------~g~VKLaDFGSAsi~~PA----- 179 (948)
T KOG0577|consen 115 LLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSE-------PGLVKLADFGSASIMAPA----- 179 (948)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecC-------CCeeeeccccchhhcCch-----
Confidence 7754 36788889999999999999999999 9999999999999988 899999999999875433
Q ss_pred cccccCccccchhccc---CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCC--C-Ch
Q 039817 603 TMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGN--L-GA 676 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~---~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~ 676 (725)
..+.||+.|||||+|. .+.|+.|+||||||++-.||.-.++|.... ....-+.-...... + ..
T Consensus 180 nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM-----------NAMSALYHIAQNesPtLqs~ 248 (948)
T KOG0577|consen 180 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-----------NAMSALYHIAQNESPTLQSN 248 (948)
T ss_pred hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc-----------hHHHHHHHHHhcCCCCCCCc
Confidence 3367999999999985 678999999999999999999888876532 11111111111111 1 23
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
+..+.+++++..||++-|.+|||.++++++-
T Consensus 249 eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 249 EWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred hhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 6678899999999999999999999999874
No 290
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.96 E-value=1.4e-29 Score=264.04 Aligned_cols=245 Identities=23% Similarity=0.285 Sum_probs=179.6
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.++.+++|.+..+ +..|+||.+... .....+.+.+|++++++++|+||+++++++..++..++||||+. ++|.++
T Consensus 12 ~~~~v~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~ 88 (284)
T cd07860 12 TYGVVYKARNKLT--GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKF 88 (284)
T ss_pred CceEEEEEEECCC--CCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHH
Confidence 4455555555433 346888877532 22334678999999999999999999999999999999999996 589888
Q ss_pred hccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 525 LFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 525 l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++. ++.+||+|||++......... .
T Consensus 89 ~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~-------~~~~~l~dfg~~~~~~~~~~~-~ 157 (284)
T cd07860 89 MDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINT-------EGAIKLADFGLARAFGVPVRT-Y 157 (284)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECC-------CCCEEEeeccchhhcccCccc-c
Confidence 8653 5689999999999999999999998 9999999999999987 788999999998765432211 1
Q ss_pred cccccCccccchhcccCCC-CCCccceehhHHHHHHHHhCCcCCCCCCCCccccc--------cCc------chHHHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAP-VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA--------NGM------ILTDWVLY 667 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~-~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~--------~~~------~~~~~~~~ 667 (725)
....++..|+|||.+.+.. ++.++||||||+++|||++|+.|+........... ... ...++...
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07860 158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS 237 (284)
T ss_pred ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhh
Confidence 2233678899999887644 68899999999999999999998864321110000 000 00000000
Q ss_pred HHHcC------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 668 CVRTG------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 668 ~~~~~------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.... .........+.+++.+|++.||++|||+++++++
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 238 -FPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred -cccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000 0011234667899999999999999999999865
No 291
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.96 E-value=1.7e-29 Score=269.26 Aligned_cols=249 Identities=18% Similarity=0.219 Sum_probs=180.6
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccc--ccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEK--VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
.+|+.++.|.+...+ ..||+|.+.. ......+.+.+|+.+++.++|+||+++++++..++..++|+||+++++|.+
T Consensus 11 ~~~~~v~~a~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~ 88 (328)
T cd08226 11 CNLTSVYLARHTPTG--TLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANS 88 (328)
T ss_pred cCceeEEEEEEcCCC--cEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHH
Confidence 456666666665444 4667776643 223334678999999999999999999999999999999999999999999
Q ss_pred hhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 524 FLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 524 ~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
++.+. ..+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+|++||+.+..........
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~-------~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 89 LLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISG-------DGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred HHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeC-------CCcEEEechHHHhhhhccCccc
Confidence 98764 4588999999999999999999998 9999999999999987 7889999998654322211110
Q ss_pred ------ccccccCccccchhcccCC--CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc---c------C-cch--
Q 039817 602 ------STMIRGTMGYMAPEWLRNA--PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA---N------G-MIL-- 661 (725)
Q Consensus 602 ------~~~~~gt~~y~aPE~~~~~--~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~---~------~-~~~-- 661 (725)
.....++..|+|||++.+. .++.++||||||++++||++|+.|+........... . . ...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 0112245679999998763 478999999999999999999999864321110000 0 0 000
Q ss_pred --HHH-----------------------HHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 662 --TDW-----------------------VLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 662 --~~~-----------------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
... +................+.+|+.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000 000000011122456778999999999999999999999865
No 292
>PTZ00284 protein kinase; Provisional
Probab=99.96 E-value=1.3e-29 Score=282.86 Aligned_cols=252 Identities=17% Similarity=0.224 Sum_probs=178.7
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCc------CCccceeeEEEcC-Cceeeeeecc
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHH------KNLVQLLGFCIEQ-NHQLLVYELM 516 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H------~niv~l~g~~~~~-~~~~lV~e~~ 516 (725)
...+|+.|++|.+... +..||||.++... ...+++..|++++++++| .+++++++++..+ ...++|||++
T Consensus 138 G~G~fg~V~~a~~~~~--~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~ 214 (467)
T PTZ00284 138 GEGTFGKVVEAWDRKR--KEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY 214 (467)
T ss_pred EeccCEEEEEEEEcCC--CeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc
Confidence 3456677777765443 4678999886432 234456677777777654 4588999988764 5788999988
Q ss_pred cCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhc-ccCCceeecCCccceEEeccCccccC---------CCCceEEe
Q 039817 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHE-ECETQIIHCDIKPQNVLLDNNYITID---------NNYITKIA 586 (725)
Q Consensus 517 ~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivH~dik~~NIll~~~~~~~~---------~~~~~kl~ 586 (725)
+++|.+++.+...+++..+..|+.|++.||.|||+ . +|+||||||+|||++.+...++ +...+||+
T Consensus 215 -g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~ 290 (467)
T PTZ00284 215 -GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRIC 290 (467)
T ss_pred -CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcccccccccccCCCCceEEEC
Confidence 66899999888889999999999999999999997 5 8999999999999986321100 12359999
Q ss_pred eccCccccCcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc----ccCcchH
Q 039817 587 DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL----ANGMILT 662 (725)
Q Consensus 587 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~----~~~~~~~ 662 (725)
|||++..... ......||..|+|||++.+..++.++|||||||++|||++|+.||......+... .......
T Consensus 291 DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~ 366 (467)
T PTZ00284 291 DLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPS 366 (467)
T ss_pred CCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCH
Confidence 9998764322 1233568999999999999999999999999999999999999997543211000 0000000
Q ss_pred HHHH--------HHHHc-C------------------CC-ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 663 DWVL--------YCVRT-G------------------NL-GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 663 ~~~~--------~~~~~-~------------------~~-~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+|.. ..... + .. .....+.+.+|+.+||+.||++|||++|+++|
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 367 EWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred HHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 0100 00000 0 00 00123567899999999999999999999974
No 293
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.96 E-value=1.7e-29 Score=263.22 Aligned_cols=244 Identities=23% Similarity=0.272 Sum_probs=180.5
Q ss_pred HHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
+++++++.+..+ +..|++|.+.... ....+.+.+|++++++++|+|++++++++.+++..++||||++ ++|.+++
T Consensus 12 ~~~vy~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~ 88 (283)
T cd07835 12 YGVVYKARDKLT--GEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYM 88 (283)
T ss_pred CeEEEEEEEcCC--CCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHH
Confidence 445555554443 3567888775332 2334678899999999999999999999999999999999995 6899998
Q ss_pred ccCC--CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 526 FRQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 526 ~~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
.... .+++..+..++.|+++||.|||+. +++|+||+|+||+++. ++.+||+|||+++........ ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~-------~~~~~l~df~~~~~~~~~~~~-~~ 157 (283)
T cd07835 89 DSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDR-------EGALKLADFGLARAFGVPVRT-YT 157 (283)
T ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcC-------CCcEEEeecccccccCCCccc-cC
Confidence 7665 789999999999999999999998 9999999999999987 789999999999765432211 12
Q ss_pred ccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc---------cC-----cchHHHHHHH
Q 039817 604 MIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA---------NG-----MILTDWVLYC 668 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~---------~~-----~~~~~~~~~~ 668 (725)
...++..|+|||.+.+. .++.++||||||+++|||++|+.|+........... .. ..+.+... .
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 236 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKP-T 236 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhh-h
Confidence 22467889999987654 578999999999999999999998864321110000 00 00000000 0
Q ss_pred HHcC------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 669 VRTG------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 669 ~~~~------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.... .......+.+.+++.+|++.+|++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 237 FPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred cccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 0112334678899999999999999999999865
No 294
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3e-29 Score=285.39 Aligned_cols=228 Identities=29% Similarity=0.402 Sum_probs=187.1
Q ss_pred ceEEEEEEccccc-CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChhhhhccCC----------
Q 039817 462 EVEVAVKQLEKVT-GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQE---------- 529 (725)
Q Consensus 462 ~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------- 529 (725)
...||||.++... ....+.+..|+++|+.+ +|+||+.++|+|..++..++|.||++.|+|.++|.+.+
T Consensus 328 ~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~ 407 (609)
T KOG0200|consen 328 YVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGV 407 (609)
T ss_pred eEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCC
Confidence 6789999997543 34567899999999998 79999999999999999999999999999999997665
Q ss_pred ------CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 530 ------IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 530 ------~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
.++....+.++.|||.||+||++. +++||||.++|||+.. +..+||+|||+++...........
T Consensus 408 ~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~-------~~~~kIaDFGlar~~~~~~~y~~~ 477 (609)
T KOG0200|consen 408 FPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITK-------NKVIKIADFGLARDHYNKDYYRTK 477 (609)
T ss_pred CccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecC-------CCEEEEccccceeccCCCCceEec
Confidence 378889999999999999999999 9999999999999987 789999999999965544433322
Q ss_pred ccc--cCccccchhcccCCCCCCccceehhHHHHHHHHhCC-cCCCCCCCCccccccCcchHHHHHHHHHcC---CCChh
Q 039817 604 MIR--GTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCK-RHTELHRVDEPTLANGMILTDWVLYCVRTG---NLGAT 677 (725)
Q Consensus 604 ~~~--gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 677 (725)
... -+..|||||.+....++.||||||||++||||+|.. .|+.... ...+. .+..+.| ..|..
T Consensus 478 ~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~----------~~~~l-~~~l~~G~r~~~P~~ 546 (609)
T KOG0200|consen 478 SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP----------PTEEL-LEFLKEGNRMEQPEH 546 (609)
T ss_pred CCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC----------cHHHH-HHHHhcCCCCCCCCC
Confidence 212 345699999999999999999999999999999844 5553211 01122 2233333 34556
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 678 KFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
..+++.++++.||+.+|++||++.|+++.|+..
T Consensus 547 c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 547 CSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred CCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 688999999999999999999999999999873
No 295
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.96 E-value=4.1e-29 Score=262.98 Aligned_cols=246 Identities=19% Similarity=0.233 Sum_probs=181.0
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.++.++.+.+..+ +..||+|.+.... ......+.+|++++++++|+||+++++++..++..++||||++ ++|.+++
T Consensus 18 ~~g~vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l 94 (301)
T cd07873 18 TYATVYKGRSKLT--DNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYL 94 (301)
T ss_pred cCEEEEEEEEcCC--CcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHH
Confidence 4455555554433 3578889875332 3334568899999999999999999999999999999999998 5898888
Q ss_pred ccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 526 FRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 526 ~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
.+. ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++......... ...
T Consensus 95 ~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~-------~~~~kl~dfg~~~~~~~~~~~-~~~ 163 (301)
T cd07873 95 DDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINE-------RGELKLADFGLARAKSIPTKT-YSN 163 (301)
T ss_pred HhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECC-------CCcEEECcCcchhccCCCCCc-ccc
Confidence 654 5688999999999999999999999 9999999999999987 788999999999764332211 122
Q ss_pred cccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc--------ccCcchHHHHHH-HHHcCC-
Q 039817 605 IRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL--------ANGMILTDWVLY-CVRTGN- 673 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~- 673 (725)
..++..|+|||.+.+. .++.++||||||+++|||++|+.|+......+... ............ ......
T Consensus 164 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (301)
T cd07873 164 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNY 243 (301)
T ss_pred cceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccccccc
Confidence 3468899999988654 57889999999999999999999986543211000 000000000000 000000
Q ss_pred ----------CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 674 ----------LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 674 ----------~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
........+.+++.+|++.||.+|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 244 PKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred CccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 011235578899999999999999999999974
No 296
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.96 E-value=5.8e-29 Score=263.69 Aligned_cols=237 Identities=21% Similarity=0.199 Sum_probs=185.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCc---cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGD---GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~---~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
.++.++.+.+.. .+..+++|.+...... ..+.+.+|++++++++|+||+++++.+..++..++||||+.+++|.+
T Consensus 13 ~~g~vy~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 90 (316)
T cd05574 13 DVGRVFLVRLKG--TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFR 90 (316)
T ss_pred ccEEEEEEEEcC--CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHH
Confidence 344455554433 3457899988653322 44678999999999999999999999999999999999999999999
Q ss_pred hhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-
Q 039817 524 FLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR- 600 (725)
Q Consensus 524 ~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~- 600 (725)
++.+. ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.++|+|||++.........
T Consensus 91 ~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~-------~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 91 LLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHE-------SGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred HHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcC-------CCCEEEeecchhhccccccccc
Confidence 98754 5689999999999999999999998 9999999999999987 788999999998754321110
Q ss_pred ---------------------------cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcc
Q 039817 601 ---------------------------TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEP 653 (725)
Q Consensus 601 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~ 653 (725)
......|+..|+|||.+.+..++.++||||||+++|+|++|+.|+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~- 239 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE- 239 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH-
Confidence 0112347889999999998889999999999999999999999986443211
Q ss_pred ccccCcchHHHHHHHHH-cCCCCh--hHHHHHHHHHHHccCCCCCCCCC----HHHHHHH
Q 039817 654 TLANGMILTDWVLYCVR-TGNLGA--TKFERITMVGLWCICPQPTLRPS----MKQVLQM 706 (725)
Q Consensus 654 ~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~l~~l~~~cl~~dp~~RPs----~~evl~~ 706 (725)
....... ....+. ..++.+.+++.+|++.+|++||+ ++|++++
T Consensus 240 ----------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 240 ----------TFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred ----------HHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 0111111 111222 25788999999999999999999 7777775
No 297
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.96 E-value=8.6e-30 Score=262.86 Aligned_cols=239 Identities=23% Similarity=0.299 Sum_probs=186.3
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.+++++++.... .+..+++|.+.... ....+.+.+|++.+++++|+||+++++.+..++..++|+|++++++|.+++
T Consensus 13 ~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~ 90 (267)
T cd06610 13 ATAVVYAAICLP--NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIM 90 (267)
T ss_pred CCeEEEEEEEcC--CCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHH
Confidence 344555555333 34578888875422 235678999999999999999999999999999999999999999999999
Q ss_pred ccC---CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc--
Q 039817 526 FRQ---EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR-- 600 (725)
Q Consensus 526 ~~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~-- 600 (725)
... ..+++.....++.|++.||.|||+. +++|+||+|+||++++ ++.+||+|||++.........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~-------~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 91 KSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGE-------DGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred HHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcC-------CCCEEEcccchHHHhccCccccc
Confidence 764 4589999999999999999999998 9999999999999987 778999999998765543222
Q ss_pred -cccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCC---
Q 039817 601 -TSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG--- 675 (725)
Q Consensus 601 -~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 675 (725)
......++..|+|||.+... .++.++|+||||++++||++|+.|+....... ...+.... ......
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-------~~~~~~~~--~~~~~~~~~ 231 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-------VLMLTLQN--DPPSLETGA 231 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-------hHHHHhcC--CCCCcCCcc
Confidence 12234588899999998776 78999999999999999999999986432111 01111100 001111
Q ss_pred --hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 676 --ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 676 --~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
....+.+.+++.+|++.||++||++++++++
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 232 DYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred ccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 1345778999999999999999999999875
No 298
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.96 E-value=1.8e-29 Score=263.87 Aligned_cols=248 Identities=22% Similarity=0.192 Sum_probs=191.8
Q ss_pred ccHHHHHHHhcccC-CcceEEEEEEccccc----CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCC
Q 039817 446 FSYQELREATNVFD-GQEVEVAVKQLEKVT----GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNG 519 (725)
Q Consensus 446 ~~~~~l~~a~~~~~-~~~~~vavk~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~g 519 (725)
..++.++.+++... ..+..++||.+.... ....+.+.+|++++.++ +|+||+++++.+..+...++||||++++
T Consensus 11 G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (288)
T cd05583 11 GAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGG 90 (288)
T ss_pred CCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCC
Confidence 34555555554432 244678899876421 23345688999999999 6999999999999999999999999999
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 520 sL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
+|.+++.....+++..+..++.|+++||.|||+. +++|+||+|+||+++. ++.+||+|||+++.......
T Consensus 91 ~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~-------~~~~~l~dfg~~~~~~~~~~ 160 (288)
T cd05583 91 ELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDS-------EGHVVLTDFGLSKEFLAEEE 160 (288)
T ss_pred cHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECC-------CCCEEEEECccccccccccc
Confidence 9999998777889999999999999999999998 9999999999999987 77899999999886544332
Q ss_pred ccccccccCccccchhcccCCC--CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH-HcCCCCh
Q 039817 600 RTSTMIRGTMGYMAPEWLRNAP--VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV-RTGNLGA 676 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~~~--~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 676 (725)
.......++..|+|||.+.+.. .+.++||||||++++||++|..|+...... ....+...... .....+.
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd05583 161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-------NSQSEISRRILKSKPPFPK 233 (288)
T ss_pred cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-------chHHHHHHHHHccCCCCCc
Confidence 2222345788999999987665 788999999999999999999998643211 11111111111 1123344
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
.....+.+++.+||+.+|++|||+.++.+.|+..
T Consensus 234 ~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 234 TMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 4567889999999999999999998888877653
No 299
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.96 E-value=2e-29 Score=264.12 Aligned_cols=238 Identities=22% Similarity=0.279 Sum_probs=185.9
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhcc
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR 527 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~ 527 (725)
++.++++.+..+ +..+++|.+........+.+.+|+.++++++|||++++++.+...+..++|+||+++++|.+++.+
T Consensus 32 ~g~v~~~~~~~~--~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 109 (293)
T cd06647 32 SGTVYTAIDVAT--GQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 109 (293)
T ss_pred CeEEEEEEEcCC--CCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh
Confidence 444444443333 356888887654455567899999999999999999999999999999999999999999999865
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccccc
Q 039817 528 QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRG 607 (725)
Q Consensus 528 ~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g 607 (725)
. .+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++......... .....+
T Consensus 110 ~-~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~-------~~~~kL~dfg~~~~~~~~~~~-~~~~~~ 177 (293)
T cd06647 110 T-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGM-------DGSVKLTDFGFCAQITPEQSK-RSTMVG 177 (293)
T ss_pred c-CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcC-------CCCEEEccCcceecccccccc-cccccC
Confidence 3 578999999999999999999999 9999999999999987 778999999998765433221 122357
Q ss_pred CccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHH
Q 039817 608 TMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGL 687 (725)
Q Consensus 608 t~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 687 (725)
+..|+|||.+....++.++||||||+++||+++|+.||........... . ..........+......+.+++.
T Consensus 178 ~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~l~~li~ 250 (293)
T cd06647 178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL----I---ATNGTPELQNPEKLSAIFRDFLN 250 (293)
T ss_pred ChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee----h---hcCCCCCCCCccccCHHHHHHHH
Confidence 8889999999888899999999999999999999999865432211000 0 00000000112234567889999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 039817 688 WCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 688 ~cl~~dp~~RPs~~evl~~ 706 (725)
+||+.+|++||++.+++.+
T Consensus 251 ~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 251 RCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHccCChhhCcCHHHHhcC
Confidence 9999999999999999987
No 300
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=6.1e-31 Score=296.62 Aligned_cols=244 Identities=25% Similarity=0.313 Sum_probs=195.0
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEc--ccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQL--EKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l--~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
....|+.++.|.+.-+|+. .|+|-+ ........+.+.+|+.++..|.|||+|+++|+-.+.+..+|.||||++|+|
T Consensus 1244 g~G~fG~VYtavN~~tGel--lAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsL 1321 (1509)
T KOG4645|consen 1244 GGGTFGKVYTAVNLDTGEL--LAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSL 1321 (1509)
T ss_pred CCcceeeeEEeecCCccch--hhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcH
Confidence 3456777777777666654 455544 344455567789999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR- 600 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~- 600 (725)
.+.+...+..++.....+..|++.|+.|||+. +||||||||.||+|+. ++.+|++|||.|..+......
T Consensus 1322 a~ll~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~-------~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1322 ASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDF-------NGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred HHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeec-------CCcEEeecccceeEecCchhcC
Confidence 99998888888888888899999999999999 9999999999999988 889999999999987654311
Q ss_pred --cccccccCccccchhcccCC---CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCC
Q 039817 601 --TSTMIRGTMGYMAPEWLRNA---PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG 675 (725)
Q Consensus 601 --~~~~~~gt~~y~aPE~~~~~---~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (725)
......||+-|||||.+.+. ...-+.||||+|||++||+||++||...+.+-. +.- -........+|
T Consensus 1392 ~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a-------IMy-~V~~gh~Pq~P 1463 (1509)
T KOG4645|consen 1392 PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA-------IMY-HVAAGHKPQIP 1463 (1509)
T ss_pred CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH-------HHh-HHhccCCCCCc
Confidence 12235699999999999754 356689999999999999999999975443210 000 01111234456
Q ss_pred hhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 676 ATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 676 ~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
.....+-.+++..|++.||++|-++.|++++=
T Consensus 1464 ~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1464 ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence 66778889999999999999999999988773
No 301
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.96 E-value=2.2e-29 Score=260.84 Aligned_cols=238 Identities=26% Similarity=0.305 Sum_probs=179.3
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCC------ceeeeeecccCCC
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQN------HQLLVYELMKNGT 520 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~------~~~lV~e~~~~gs 520 (725)
++.++.+.+..+ +..+++|.+.... ...+.|.+|+++++++ +|+||+++++++.... ..++||||+++++
T Consensus 19 ~~~v~~~~~~~~--~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~ 95 (275)
T cd06608 19 YGKVYKARHKKT--GQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGS 95 (275)
T ss_pred CeEEEEEEECCC--CcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCc
Confidence 444555554333 3567888776433 3456799999999999 7999999999997644 4899999999999
Q ss_pred hhhhhcc----CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 521 LSAFLFR----QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 521 L~~~l~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
|.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++.....
T Consensus 96 L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~-------~~~~~l~d~~~~~~~~~ 165 (275)
T cd06608 96 VTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTK-------NAEVKLVDFGVSAQLDS 165 (275)
T ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEcc-------CCeEEECCCccceeccc
Confidence 9999865 35789999999999999999999999 9999999999999987 78899999999876543
Q ss_pred CCCccccccccCccccchhcccC-----CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc
Q 039817 597 DQTRTSTMIRGTMGYMAPEWLRN-----APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT 671 (725)
Q Consensus 597 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (725)
... ......++..|+|||.+.. ..++.++||||||++++||++|+.|+....... ............
T Consensus 166 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~ 237 (275)
T cd06608 166 TLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-------ALFKIPRNPPPT 237 (275)
T ss_pred chh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-------HHHHhhccCCCC
Confidence 221 1223448889999998753 346789999999999999999999986321110 011100000000
Q ss_pred CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 672 GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 672 ~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...+....+.+.+++.+||+.||++|||+.+++++
T Consensus 238 ~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 238 LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 01112345689999999999999999999999874
No 302
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=2e-29 Score=262.04 Aligned_cols=238 Identities=24% Similarity=0.256 Sum_probs=185.7
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
.|++++.+.+..+ +..+++|.+.... ....+.+.+|++++++++||||+++++.+...+..++||||+++++|.+
T Consensus 5 ~~g~vy~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 82 (277)
T cd05577 5 GFGEVCACQVKAT--GKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKY 82 (277)
T ss_pred CceeEEEEEEcCC--CcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHH
Confidence 3455555554443 3467888775321 2335567899999999999999999999999999999999999999999
Q ss_pred hhccCC--CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 524 FLFRQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 524 ~l~~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
++.+.. .+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++........
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~-------~~~~~l~dfg~~~~~~~~~~-- 150 (277)
T cd05577 83 HIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDD-------HGNVRISDLGLAVELKGGKK-- 150 (277)
T ss_pred HHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECC-------CCCEEEccCcchhhhccCCc--
Confidence 997664 789999999999999999999999 9999999999999987 78899999999876543211
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH--HcCCCChhHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV--RTGNLGATKF 679 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 679 (725)
.....++..|+|||.+.+..++.++||||||+++++|++|+.|+....... ....+.... .....+....
T Consensus 151 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 222 (277)
T cd05577 151 IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV--------EKEELKRRTLEMAVEYPDKFS 222 (277)
T ss_pred cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc--------cHHHHHhccccccccCCccCC
Confidence 122347788999999988889999999999999999999999986543211 011111111 1122334557
Q ss_pred HHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
+.+.+++.+||+.+|.+|| ++.+++++
T Consensus 223 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 223 PEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred HHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 7899999999999999999 77777754
No 303
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.96 E-value=1.5e-29 Score=259.26 Aligned_cols=236 Identities=25% Similarity=0.354 Sum_probs=187.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.++.++.+.+..+ +..+++|.+... ......++.+|++++++++|+||+++++++......++||||+++++|.++
T Consensus 12 ~~~~v~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 89 (256)
T cd08530 12 SYGSVYKVKRLSD--NQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKA 89 (256)
T ss_pred CceeEEEEEECCC--CCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHH
Confidence 4455555554433 356788877543 233456788999999999999999999999999999999999999999999
Q ss_pred hcc----CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 525 LFR----QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 525 l~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
+.+ ...+++..++.++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||+++.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~-------~~~~kl~d~g~~~~~~~~~~- 158 (256)
T cd08530 90 ISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVA-------NDLVKIGDLGISKVLKKNMA- 158 (256)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEec-------CCcEEEeeccchhhhccCCc-
Confidence 866 35689999999999999999999999 9999999999999987 77899999999987654421
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHH
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFE 680 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (725)
....++..|+|||.+.+..++.++|+||||++++||++|+.|+...... ....... .......+.....
T Consensus 159 --~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~ 227 (256)
T cd08530 159 --KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--------DLRYKVQ-RGKYPPIPPIYSQ 227 (256)
T ss_pred --ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHh-cCCCCCCchhhCH
Confidence 1234788999999999999999999999999999999999998643211 0111111 0011223345667
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 681 RITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+.+++.+|++.+|++||++.+++++
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 228 DLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 89999999999999999999999876
No 304
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=2.4e-29 Score=261.65 Aligned_cols=236 Identities=22% Similarity=0.240 Sum_probs=181.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhc---cCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGR---THHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~---l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
+|+.++.+.+.- .+..+|+|.+.... ......+.+|..++.. .+|+||+.+++.+..++..++||||+++++
T Consensus 6 ~~g~Vy~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 83 (279)
T cd05633 6 GFGEVYGCRKAD--TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGD 83 (279)
T ss_pred CCeEEEEEEECC--CCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCC
Confidence 345555555443 34578888775432 1222334555544443 479999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|.+++..+..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++........
T Consensus 84 L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~-------~~~~~l~dfg~~~~~~~~~~- 152 (279)
T cd05633 84 LHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDE-------HGHVRISDLGLACDFSKKKP- 152 (279)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECC-------CCCEEEccCCcceeccccCc-
Confidence 999998888899999999999999999999999 9999999999999987 78899999999875533221
Q ss_pred cccccccCccccchhccc-CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHH--HHcCCCChh
Q 039817 601 TSTMIRGTMGYMAPEWLR-NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYC--VRTGNLGAT 677 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~-~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 677 (725)
....|+..|+|||.+. +..++.++||||||++++||++|..||....... ....... .....++..
T Consensus 153 --~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---------~~~~~~~~~~~~~~~~~~ 221 (279)
T cd05633 153 --HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---------KHEIDRMTLTVNVELPDS 221 (279)
T ss_pred --cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC---------HHHHHHHhhcCCcCCccc
Confidence 2235889999999886 4568999999999999999999999986442211 0111111 112234455
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 678 KFERITMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
....+.+++.+|++.||++|| +++|++++
T Consensus 222 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 222 FSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred cCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 678899999999999999999 69999987
No 305
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.96 E-value=5.6e-29 Score=258.54 Aligned_cols=238 Identities=21% Similarity=0.273 Sum_probs=185.2
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc-cCccHHHHHHHHHHHhccC---cCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTH---HKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..++.++++.+..+ +..+++|.+... .....+++.+|++++++++ |+|++++++++..+...++||||+++++|
T Consensus 12 g~~g~v~~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L 89 (277)
T cd06917 12 GAYGAVYRGKHVPT--GRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSV 89 (277)
T ss_pred cCCceEEEEEEcCC--CcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcH
Confidence 34555566555433 457888887543 3344567889999999986 99999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++.. ..+++.....++.|+++||.|||+. +++|+||+|+||+++. ++.++|+|||++.........
T Consensus 90 ~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~-------~~~~~l~dfg~~~~~~~~~~~- 157 (277)
T cd06917 90 RTLMKA-GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTN-------TGNVKLCDFGVAALLNQNSSK- 157 (277)
T ss_pred HHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcC-------CCCEEEccCCceeecCCCccc-
Confidence 999865 4789999999999999999999999 9999999999999987 788999999999876543322
Q ss_pred ccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCCh-hHH
Q 039817 602 STMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA-TKF 679 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 679 (725)
.....|+..|+|||.+.++ .++.++||||||+++|+|++|+.|+......... ..... .....++. ...
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~ 228 (277)
T cd06917 158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM--------MLIPK-SKPPRLEDNGYS 228 (277)
T ss_pred cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh--------hcccc-CCCCCCCcccCC
Confidence 2234588899999988754 5789999999999999999999998643221100 00000 00111222 255
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..+.+++.+|++.||++||++.+++++
T Consensus 229 ~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 229 KLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 688999999999999999999999875
No 306
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.96 E-value=6.2e-29 Score=254.31 Aligned_cols=237 Identities=23% Similarity=0.321 Sum_probs=189.7
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccccC--ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVTG--DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
++.++.+++... +..+++|.+..... ...+.+.+|++++++++|+|++++++++..++..++||||+++++|.+++
T Consensus 13 ~~~v~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 90 (254)
T cd06627 13 FGVVYKGLNLET--GDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQII 90 (254)
T ss_pred CeEEEEEEEcCC--CcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHH
Confidence 344444444333 35688888865443 45568999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 526 FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 526 ~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
.....+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++......... ....
T Consensus 91 ~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~-------~~~~~l~d~~~~~~~~~~~~~-~~~~ 159 (254)
T cd06627 91 KKFGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTK-------DGVVKLADFGVATKLNDVSKD-DASV 159 (254)
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECC-------CCCEEEeccccceecCCCccc-cccc
Confidence 8888899999999999999999999999 9999999999999987 788999999999876543322 2234
Q ss_pred ccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHH
Q 039817 606 RGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMV 685 (725)
Q Consensus 606 ~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 685 (725)
.++..|+|||...+..++.++||||+|+++++|++|+.|+....... ..+..........+....+.+.++
T Consensus 160 ~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 230 (254)
T cd06627 160 VGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA---------ALFRIVQDDHPPLPEGISPELKDF 230 (254)
T ss_pred ccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH---------HHHHHhccCCCCCCCCCCHHHHHH
Confidence 57889999999988888999999999999999999999886432100 000011111223444567889999
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 039817 686 GLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 686 ~~~cl~~dp~~RPs~~evl~~ 706 (725)
+.+|++.+|++||++.+++.+
T Consensus 231 i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 231 LMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHHHHhCChhhCcCHHHHhcC
Confidence 999999999999999999854
No 307
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=1.9e-29 Score=258.55 Aligned_cols=238 Identities=26% Similarity=0.312 Sum_probs=191.8
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcC--CceeeeeecccCCChh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~e~~~~gsL~ 522 (725)
.++.++.+.+.. .+..|++|.+.... ....+.+.+|++.+++++|+||+++++.+... ...++|+||+++++|.
T Consensus 12 ~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (260)
T cd06606 12 SFGSVYLALDKD--TGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLS 89 (260)
T ss_pred CceEEEEEEECC--CCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHH
Confidence 344455554443 34578888876443 24567899999999999999999999999988 8899999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-c
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR-T 601 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~-~ 601 (725)
+++.+...+++..+..++.|+++||.|||+. +++|+||+|+||+++. ++.+||+|||.+......... .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~-------~~~~~l~d~~~~~~~~~~~~~~~ 159 (260)
T cd06606 90 SLLKKFGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDS-------DGVVKLADFGCAKRLGDIETGEG 159 (260)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcC-------CCCEEEcccccEEeccccccccc
Confidence 9998878899999999999999999999998 9999999999999987 789999999999876554321 1
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH---HcCCCChhH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV---RTGNLGATK 678 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 678 (725)
.....++..|+|||.+.....+.++||||||+++++|++|+.|+...... ........ ....++...
T Consensus 160 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 229 (260)
T cd06606 160 TGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP----------MAALYKIGSSGEPPEIPEHL 229 (260)
T ss_pred ccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch----------HHHHHhccccCCCcCCCccc
Confidence 12345788999999998888999999999999999999999998754310 11111111 112344455
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 679 FERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...+.+++.+|++.+|++||++.+++++
T Consensus 230 ~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 230 SEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred CHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 7889999999999999999999999875
No 308
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=4.3e-29 Score=261.44 Aligned_cols=226 Identities=20% Similarity=0.294 Sum_probs=180.6
Q ss_pred cceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHH
Q 039817 461 QEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540 (725)
Q Consensus 461 ~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~ 540 (725)
.+..|+||.+........+.+.+|+.++++++|+||+++++.+..++..++||||+++++|.+++.. ..+++.....++
T Consensus 44 ~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~ 122 (292)
T cd06657 44 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVC 122 (292)
T ss_pred CCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHH
Confidence 4567888887654445566799999999999999999999999999999999999999999998744 467999999999
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCC
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA 620 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 620 (725)
.|++.||+|||+. +++|+||+|+||+++. ++.++|+|||++........ ......++..|+|||.+.+.
T Consensus 123 ~ql~~~l~~lH~~---givH~dl~p~Nilv~~-------~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~pE~~~~~ 191 (292)
T cd06657 123 LAVLKALSVLHAQ---GVIHRDIKSDSILLTH-------DGRVKLSDFGFCAQVSKEVP-RRKSLVGTPYWMAPELISRL 191 (292)
T ss_pred HHHHHHHHHHHHC---CeecCCCCHHHEEECC-------CCCEEEcccccceecccccc-cccccccCccccCHHHhcCC
Confidence 9999999999999 9999999999999987 77899999999876543321 12234578899999999888
Q ss_pred CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc-CCCChhHHHHHHHHHHHccCCCCCCCCC
Q 039817 621 PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT-GNLGATKFERITMVGLWCICPQPTLRPS 699 (725)
Q Consensus 621 ~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dp~~RPs 699 (725)
.++.++||||||++++||++|..|+....... ........... ..........+.+++.+||+.+|.+||+
T Consensus 192 ~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~ 263 (292)
T cd06657 192 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--------AMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRAT 263 (292)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcC
Confidence 89999999999999999999999986432110 01111111100 0011234567889999999999999999
Q ss_pred HHHHHHH
Q 039817 700 MKQVLQM 706 (725)
Q Consensus 700 ~~evl~~ 706 (725)
+.+++++
T Consensus 264 ~~~ll~~ 270 (292)
T cd06657 264 AAELLKH 270 (292)
T ss_pred HHHHhcC
Confidence 9999985
No 309
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.96 E-value=9.2e-29 Score=262.23 Aligned_cols=239 Identities=24% Similarity=0.278 Sum_probs=183.6
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC---ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG---DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
+++.++++.+..+ +..+++|.+..... .....+.+|++++++++|+|++++++++..++..++||||+++ +|.+
T Consensus 37 ~~~~v~~~~~~~~--~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~ 113 (317)
T cd06635 37 SFGAVYFARDVRT--NEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SASD 113 (317)
T ss_pred CCeEEEEEEEcCC--CcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHH
Confidence 3444454444333 45788888754322 2345788999999999999999999999999999999999975 7777
Q ss_pred hhcc-CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 524 FLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 524 ~l~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
.+.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++......
T Consensus 114 ~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~-------~~~~kl~dfg~~~~~~~~----- 178 (317)
T cd06635 114 LLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTE-------PGQVKLADFGSASIASPA----- 178 (317)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECC-------CCCEEEecCCCccccCCc-----
Confidence 7654 46689999999999999999999999 9999999999999977 788999999998754322
Q ss_pred cccccCccccchhccc---CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc---CCCCh
Q 039817 603 TMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT---GNLGA 676 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~---~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 676 (725)
....++..|+|||++. .+.++.++||||||++++||++|+.|+...... ......... .....
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~ 247 (317)
T cd06635 179 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----------SALYHIAQNESPTLQSN 247 (317)
T ss_pred ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-----------HHHHHHHhccCCCCCCc
Confidence 1234788999999873 456889999999999999999999987543111 111111111 11122
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCC
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSEVG 714 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~~~ 714 (725)
...+.+.+++.+|++.+|.+||++.++++++-.....+
T Consensus 248 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 248 EWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred cccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 45677999999999999999999999999876554433
No 310
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.96 E-value=6.9e-29 Score=257.93 Aligned_cols=237 Identities=23% Similarity=0.317 Sum_probs=185.3
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.|+.++++.+..+ +..+|+|.+.... ....+.|.+|++++++++|+||+++++++..++..++||||+++++|.+++
T Consensus 16 ~~~~vy~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i 93 (277)
T cd06641 16 SFGEVFKGIDNRT--QKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL 93 (277)
T ss_pred CCeEEEEEEECCC--CcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHH
Confidence 3445555544333 4578888765322 233467899999999999999999999999999999999999999999998
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 526 FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 526 ~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
.. ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++. ++.++|+|||++......... ....
T Consensus 94 ~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~-------~~~~~l~dfg~~~~~~~~~~~-~~~~ 161 (277)
T cd06641 94 EP-GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSE-------HGEVKLADFGVAGQLTDTQIK-RNTF 161 (277)
T ss_pred hc-CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECC-------CCCEEEeecccceecccchhh-hccc
Confidence 64 4689999999999999999999998 9999999999999987 788999999998765432211 1223
Q ss_pred ccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHH
Q 039817 606 RGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMV 685 (725)
Q Consensus 606 ~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 685 (725)
.++..|+|||.+.+..++.++||||||++++||++|..|+...... .....+ .......++......+.++
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (277)
T cd06641 162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--------KVLFLI-PKNNPPTLEGNYSKPLKEF 232 (277)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--------HHHHHH-hcCCCCCCCcccCHHHHHH
Confidence 4788899999998888999999999999999999999988532211 001111 0001112333456788999
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 039817 686 GLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 686 ~~~cl~~dp~~RPs~~evl~~ 706 (725)
+.+|++.+|.+||++.+++++
T Consensus 233 i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 233 VEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHccCChhhCcCHHHHHhC
Confidence 999999999999999999996
No 311
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=1.2e-29 Score=260.94 Aligned_cols=238 Identities=20% Similarity=0.209 Sum_probs=181.9
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccC---ccHHHHHHHHHHH-hccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTG---DGEKSFLREVQVI-GRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~---~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..++.+++|++..++ ..||||.+..... .....+..|..++ ...+|+|++++++++..++..++|+||+++++|
T Consensus 7 g~~~~v~~a~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 84 (260)
T cd05611 7 GAFGSVYLAKKRSTG--DYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDC 84 (260)
T ss_pred CCCeeEEEEEecCCC--CeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCH
Confidence 345666667665544 4788888764321 2223455565554 455899999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+++.....+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||+++.....
T Consensus 85 ~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~-------~~~~~l~dfg~~~~~~~~---- 150 (260)
T cd05611 85 ASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQ-------TGHLKLTDFGLSRNGLEN---- 150 (260)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECC-------CCcEEEeecccceecccc----
Confidence 99998878899999999999999999999998 9999999999999987 788999999998754331
Q ss_pred ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATKF 679 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 679 (725)
....++..|+|||.+.+..++.++||||||++++||++|..|+....... .......... .........
T Consensus 151 -~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 221 (260)
T cd05611 151 -KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA--------VFDNILSRRINWPEEVKEFCS 221 (260)
T ss_pred -ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhcccCCCCcccccCC
Confidence 22347888999999988888999999999999999999999986432110 0000000000 011222356
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
..+.+++.+||+.+|++||++.++.+.|+
T Consensus 222 ~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 222 PEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred HHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 78999999999999999998766655553
No 312
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.96 E-value=5.1e-29 Score=262.98 Aligned_cols=232 Identities=26% Similarity=0.311 Sum_probs=179.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC---ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG---DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
.++.++.+++..+ +..|++|.+..... ...+++.+|++++++++||||++++++|..++..++||||++ |+|.+
T Consensus 27 ~~g~vy~~~~~~~--~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~ 103 (307)
T cd06607 27 SFGAVYFARDVRT--NEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASD 103 (307)
T ss_pred CCeEEEEEEEcCC--CcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHH
Confidence 4445555554433 45788887753322 233578899999999999999999999999999999999997 57766
Q ss_pred hhcc-CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 524 FLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 524 ~l~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++.......
T Consensus 104 ~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~-------~~~~kL~dfg~~~~~~~~~---- 169 (307)
T cd06607 104 ILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTE-------PGTVKLADFGSASLVSPAN---- 169 (307)
T ss_pred HHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECC-------CCCEEEeecCcceecCCCC----
Confidence 6653 46789999999999999999999998 9999999999999987 7889999999987653321
Q ss_pred cccccCccccchhccc---CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCC-Ch
Q 039817 603 TMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNL-GA 676 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~---~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~ 676 (725)
...++..|+|||.+. ...++.++||||||+++|||++|+.|+...... ......... ... ..
T Consensus 170 -~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~ 237 (307)
T cd06607 170 -SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----------SALYHIAQNDSPTLSSN 237 (307)
T ss_pred -CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH-----------HHHHHHhcCCCCCCCch
Confidence 234778899999874 456889999999999999999999988543211 001111101 111 12
Q ss_pred hHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 677 TKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 677 ~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
...+.+.+++.+||+.+|++||++.+|+.+.
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 238 DWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred hhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 3456799999999999999999999999864
No 313
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.96 E-value=2.3e-29 Score=269.96 Aligned_cols=244 Identities=23% Similarity=0.244 Sum_probs=178.5
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcC------Cceeeeeecc
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ------NHQLLVYELM 516 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~lV~e~~ 516 (725)
..+|+.++++.+..+ +..||||.+.... ....+.+.+|++++++++|+||+++++++... ...++++|++
T Consensus 25 ~G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (343)
T cd07878 25 SGAYGSVCSAYDTRL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM 102 (343)
T ss_pred cCCCeEEEEEEECCC--CCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC
Confidence 345666666665443 4578999886432 22345688999999999999999999988643 3568999988
Q ss_pred cCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 517 ~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
+++|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 103 -~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~-------~~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 103 -GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNE-------DCELRILDFGLARQADD 170 (343)
T ss_pred -CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECC-------CCCEEEcCCccceecCC
Confidence 678988774 45689999999999999999999999 9999999999999987 78999999999986543
Q ss_pred CCCccccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc----cCcchHH--------
Q 039817 597 DQTRTSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA----NGMILTD-------- 663 (725)
Q Consensus 597 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~----~~~~~~~-------- 663 (725)
.. ....|+..|+|||.+.+ ..++.++||||||+++|||++|+.||........... ......+
T Consensus 171 ~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07878 171 EM----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSE 246 (343)
T ss_pred Cc----CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchh
Confidence 21 22458899999999876 5789999999999999999999999864321100000 0000000
Q ss_pred HHHHHHHc-CCCCh--------hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 664 WVLYCVRT-GNLGA--------TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 664 ~~~~~~~~-~~~~~--------~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
........ ...+. ...+.+.+++.+|++.||.+|||+.|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 247 HARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred hHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 00110 123457899999999999999999999976
No 314
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=4.8e-29 Score=260.93 Aligned_cols=243 Identities=22% Similarity=0.217 Sum_probs=188.3
Q ss_pred cHHHHHHHhcccC-CcceEEEEEEccccc----CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 447 SYQELREATNVFD-GQEVEVAVKQLEKVT----GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 447 ~~~~l~~a~~~~~-~~~~~vavk~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
+|+.++.+.+... ..+..||+|.+.... ....+.+.+|++++.++ +|+||+++++.+..+...++||||+++++
T Consensus 12 ~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (290)
T cd05613 12 AYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGE 91 (290)
T ss_pred CcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCc
Confidence 4555555554332 345678999886422 22346788999999999 69999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|.+++.....+++.....++.|+++||.|||+. +++||||+|+||+++. ++.+||+|||++.........
T Consensus 92 L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~-------~~~~kl~dfg~~~~~~~~~~~ 161 (290)
T cd05613 92 LFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDS-------NGHVVLTDFGLSKEFHEDEVE 161 (290)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECC-------CCCEEEeeCccceeccccccc
Confidence 999998888889999999999999999999998 9999999999999987 789999999999876543333
Q ss_pred cccccccCccccchhcccCC--CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCCCChh
Q 039817 601 TSTMIRGTMGYMAPEWLRNA--PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGNLGAT 677 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~--~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 677 (725)
......|+..|+|||.+... .++.++||||||+++|+|++|+.|+...... ....+....... ....+..
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 234 (290)
T cd05613 162 RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-------NSQAEISRRILKSEPPYPQE 234 (290)
T ss_pred ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-------ccHHHHHHHhhccCCCCCcc
Confidence 22334588899999998753 4678999999999999999999998643211 111122222111 1233445
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 678 KFERITMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
....+.+++.+|++.+|++|| ++++++.+
T Consensus 235 ~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 235 MSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 667889999999999999997 77777765
No 315
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=6.4e-29 Score=250.70 Aligned_cols=227 Identities=21% Similarity=0.221 Sum_probs=183.5
Q ss_pred CcceEEEEEEcccccCc---cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC--CCCCHH
Q 039817 460 GQEVEVAVKQLEKVTGD---GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ--EIPTWD 534 (725)
Q Consensus 460 ~~~~~vavk~l~~~~~~---~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~l~~~ 534 (725)
+.....|+|.+.+..-. .......|-++|+.++||.|+.||+.++.++..++|||||+||+|...++++ +.+++.
T Consensus 100 ~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~ 179 (459)
T KOG0610|consen 100 GTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSES 179 (459)
T ss_pred CCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchh
Confidence 33467899998764332 3345678999999999999999999999999999999999999999999887 678999
Q ss_pred HHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc------------------
Q 039817 535 KRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK------------------ 596 (725)
Q Consensus 535 ~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~------------------ 596 (725)
.+.-++..|+.||+|||-. +||.|||||+||||.+ +|.+-|+||.|+.....
T Consensus 180 ~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvre-------dGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~ 249 (459)
T KOG0610|consen 180 AARFYAAEVLLALEYLHML---GIVYRDLKPENILVRE-------DGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPS 249 (459)
T ss_pred hHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEec-------CCcEEeeeccccccCCCCCeeeccCCCCCCCCCcc
Confidence 9999999999999999999 9999999999999988 89999999998743210
Q ss_pred ---------------CCC----------------------ccccccccCccccchhcccCCCCCCccceehhHHHHHHHH
Q 039817 597 ---------------DQT----------------------RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639 (725)
Q Consensus 597 ---------------~~~----------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ell 639 (725)
... .....++||-.|+|||++.+.....+.|.|+|||++|||+
T Consensus 250 ~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmL 329 (459)
T KOG0610|consen 250 CRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEML 329 (459)
T ss_pred cccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHH
Confidence 000 0011256999999999999999999999999999999999
Q ss_pred hCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCCh--hHHHHHHHHHHHccCCCCCCCCC----HHHHHHH
Q 039817 640 FCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA--TKFERITMVGLWCICPQPTLRPS----MKQVLQM 706 (725)
Q Consensus 640 tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~cl~~dp~~RPs----~~evl~~ 706 (725)
.|..||......+ .+..-+.+ ...++. ..+..+++||++.|.+||++|.- +.||.+|
T Consensus 330 yG~TPFKG~~~~~-------Tl~NIv~~---~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 330 YGTTPFKGSNNKE-------TLRNIVGQ---PLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRH 392 (459)
T ss_pred hCCCCcCCCCchh-------hHHHHhcC---CCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcC
Confidence 9999998765432 11111111 112222 45678999999999999999998 8888875
No 316
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.96 E-value=6.2e-29 Score=258.96 Aligned_cols=239 Identities=24% Similarity=0.298 Sum_probs=180.1
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhcc-CcCCccceeeEEEc------CCceeeeeecccC
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIE------QNHQLLVYELMKN 518 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~------~~~~~lV~e~~~~ 518 (725)
.+|+.++.+.+... +..+++|.+... .....++..|+.+++++ +|+||+++++++.. .+..+++|||+++
T Consensus 27 g~~~~v~~~~~~~~--~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~ 103 (282)
T cd06636 27 GTYGQVYKGRHVKT--GQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGA 103 (282)
T ss_pred CCCeEEEEEEEcCC--CcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCC
Confidence 34555555555433 357888887543 23446788999999998 79999999999853 4578999999999
Q ss_pred CChhhhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 519 GTLSAFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 519 gsL~~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
|+|.+++... ..+++..+..++.|+++||.|||+. +++|+||+|+||+++. ++.+||+|||++.....
T Consensus 104 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~-------~~~~~l~dfg~~~~~~~ 173 (282)
T cd06636 104 GSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTE-------NAEVKLVDFGVSAQLDR 173 (282)
T ss_pred CcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC-------CCCEEEeeCcchhhhhc
Confidence 9999998653 4578888999999999999999999 9999999999999987 77899999999876532
Q ss_pred CCCccccccccCccccchhccc-----CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc
Q 039817 597 DQTRTSTMIRGTMGYMAPEWLR-----NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT 671 (725)
Q Consensus 597 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (725)
... ......++..|+|||.+. ...++.++||||||+++|||++|+.|+........ .. ........
T Consensus 174 ~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~-------~~-~~~~~~~~ 244 (282)
T cd06636 174 TVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA-------LF-LIPRNPPP 244 (282)
T ss_pred ccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh-------hh-hHhhCCCC
Confidence 221 122345888999999875 34678899999999999999999999854321110 00 00000000
Q ss_pred CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 672 GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 672 ~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.......+..+.+++.+||+.||.+||++.|++++
T Consensus 245 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 245 KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 11112356789999999999999999999999864
No 317
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.96 E-value=8.6e-29 Score=259.43 Aligned_cols=246 Identities=22% Similarity=0.236 Sum_probs=180.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcC--CceeeeeecccCCChh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~e~~~~gsL~ 522 (725)
.++.+++|++..+ +..+++|.++... ......+.+|++++.+++||||+++++++... +..++||||+++ +|.
T Consensus 17 ~~~~v~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~ 93 (293)
T cd07843 17 TYGVVYRARDKKT--GEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLK 93 (293)
T ss_pred CCeEEEEEEECCC--CcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHH
Confidence 3455555555433 4578888876432 22234678899999999999999999999877 899999999985 999
Q ss_pred hhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+++... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++.........
T Consensus 94 ~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~-------~~~~~l~d~g~~~~~~~~~~~- 162 (293)
T cd07843 94 SLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNN-------RGILKICDFGLAREYGSPLKP- 162 (293)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECC-------CCcEEEeecCceeeccCCccc-
Confidence 888765 4589999999999999999999999 9999999999999987 789999999999876543211
Q ss_pred ccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc-----ccCcchHHHHH---------
Q 039817 602 STMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL-----ANGMILTDWVL--------- 666 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~-----~~~~~~~~~~~--------- 666 (725)
.....++..|+|||.+.+. .++.++|+||||++++||++|+.|+.......... ........|..
T Consensus 163 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (293)
T cd07843 163 YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKK 242 (293)
T ss_pred cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcc
Confidence 1223467889999998754 46899999999999999999999886432111000 00000000000
Q ss_pred -------HHHHcCCCChh-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 667 -------YCVRTGNLGAT-KFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 667 -------~~~~~~~~~~~-~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.......++.. ..+.+.+++.+|++.+|++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 243 KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred cccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000111222 36778899999999999999999999875
No 318
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96 E-value=2e-28 Score=256.42 Aligned_cols=244 Identities=20% Similarity=0.232 Sum_probs=176.6
Q ss_pred HHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhc
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLF 526 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~ 526 (725)
++.++.+.+..++ ..+++|.+.... ......+.+|++++++++|+||+++++++..++..++|+||++ ++|.+++.
T Consensus 18 ~~~v~~~~~~~~~--~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~ 94 (291)
T cd07870 18 YATVYKGISRING--QLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMI 94 (291)
T ss_pred CEEEEEEEEcCCC--cEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHH
Confidence 4444555444433 468888875433 2334567899999999999999999999999999999999996 57776665
Q ss_pred cC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccccc
Q 039817 527 RQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMI 605 (725)
Q Consensus 527 ~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 605 (725)
.. ..+++..+..++.|++.||.|||+. +|+|+||||+||+++. ++.+||+|||+++........ ....
T Consensus 95 ~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~-------~~~~~l~Dfg~~~~~~~~~~~-~~~~ 163 (291)
T cd07870 95 QHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISY-------LGELKLADFGLARAKSIPSQT-YSSE 163 (291)
T ss_pred hCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcC-------CCcEEEeccccccccCCCCCC-CCCc
Confidence 43 5678888999999999999999999 9999999999999987 788999999998764332211 1223
Q ss_pred ccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCcccccc---------Cc------chHHHHHHHH
Q 039817 606 RGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLAN---------GM------ILTDWVLYCV 669 (725)
Q Consensus 606 ~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~---------~~------~~~~~~~~~~ 669 (725)
.++..|+|||.+.+. .++.++||||||++++||++|+.|++........... .. ....+.....
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (291)
T cd07870 164 VVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWF 243 (291)
T ss_pred cccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhc
Confidence 468899999998754 5788999999999999999999998643221000000 00 0000000000
Q ss_pred HcCCCC---------hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 670 RTGNLG---------ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 670 ~~~~~~---------~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
....+ ......+.+++.+|++.||++|||++|++.+
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 244 -LPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred -cccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 00000 0124578899999999999999999999864
No 319
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.96 E-value=1.9e-28 Score=256.45 Aligned_cols=246 Identities=20% Similarity=0.247 Sum_probs=178.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.++.++++.+..+ +..|+||.+.... ......+.+|++++++++|+||+++++++..++..++||||+++ +|.+++
T Consensus 17 ~~~~vy~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~ 93 (291)
T cd07844 17 SYATVYKGRSKLT--GQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYM 93 (291)
T ss_pred CCeEEEEEEEcCC--CcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHH
Confidence 4455555554433 3578999875432 22335678999999999999999999999999999999999985 899988
Q ss_pred ccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 526 FRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 526 ~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
.+. ..+++.....++.|+++||.|||+. +++|+||||+||+++. ++.+||+|||+++........ ...
T Consensus 94 ~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~-------~~~~kl~dfg~~~~~~~~~~~-~~~ 162 (291)
T cd07844 94 DDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISE-------RGELKLADFGLARAKSVPSKT-YSN 162 (291)
T ss_pred HhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcC-------CCCEEECccccccccCCCCcc-ccc
Confidence 764 4678999999999999999999999 9999999999999987 788999999998754322111 112
Q ss_pred cccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc------cCcchHHHHH-----------
Q 039817 605 IRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA------NGMILTDWVL----------- 666 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~------~~~~~~~~~~----------- 666 (725)
..++..|+|||.+.+ ..++.++||||+|+++|||++|+.|+........... .......+..
T Consensus 163 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (291)
T cd07844 163 EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS 242 (291)
T ss_pred cccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccc
Confidence 236788999998865 4588999999999999999999998864331100000 0000000000
Q ss_pred ------HHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 667 ------YCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 667 ------~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...............+.+++.+|++.+|++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000000001112677899999999999999999998864
No 320
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.96 E-value=1.5e-28 Score=253.91 Aligned_cols=234 Identities=18% Similarity=0.193 Sum_probs=178.2
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
...|+.++.+.+..++ ..+++|.+....... .|+.....+ +|+||+++++.+..++..++||||+++++|.+
T Consensus 26 ~g~~g~v~~~~~~~~~--~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~ 98 (267)
T PHA03390 26 DGKFGKVSVLKHKPTQ--KLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFD 98 (267)
T ss_pred CCCceEEEEEEEcCCC--cEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHH
Confidence 3445566666554443 467787775432111 122222222 79999999999999999999999999999999
Q ss_pred hhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCC-ceEEeeccCccccCcCCCccc
Q 039817 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNY-ITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 524 ~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~-~~kl~Dfgla~~~~~~~~~~~ 602 (725)
++.....+++..+..++.|+++||.|||+. +++||||||+||+++. ++ .++|+|||++.......
T Consensus 99 ~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~-------~~~~~~l~dfg~~~~~~~~~---- 164 (267)
T PHA03390 99 LLKKEGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDR-------AKDRIYLCDYGLCKIIGTPS---- 164 (267)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeC-------CCCeEEEecCccceecCCCc----
Confidence 998877899999999999999999999999 9999999999999987 55 89999999987654322
Q ss_pred cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHH
Q 039817 603 TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERI 682 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 682 (725)
...++..|+|||++.+..++.++||||||++++||++|+.|+....... .....+...............+.+
T Consensus 165 -~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T PHA03390 165 -CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE------LDLESLLKRQQKKLPFIKNVSKNA 237 (267)
T ss_pred -cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch------hhHHHHHHhhcccCCcccccCHHH
Confidence 2347889999999998899999999999999999999999987432211 111122221111122333567889
Q ss_pred HHHHHHccCCCCCCCCC-HHHHHHH
Q 039817 683 TMVGLWCICPQPTLRPS-MKQVLQM 706 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs-~~evl~~ 706 (725)
.+++.+||+.+|.+||+ ++|++++
T Consensus 238 ~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 238 NDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred HHHHHHHhccChhhCCchHHHHhcC
Confidence 99999999999999995 6988854
No 321
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.96 E-value=6.4e-29 Score=254.63 Aligned_cols=236 Identities=24% Similarity=0.358 Sum_probs=189.2
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC--ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG--DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.++.++.+.+.. .+..+++|.+..... ...+.+.+|++++++++|+|++++++.+..++..++|+||+++++|.++
T Consensus 12 ~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 89 (258)
T cd08215 12 SFGKVYLVRRKS--DGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQK 89 (258)
T ss_pred CCeEEEEEEEcC--CCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHH
Confidence 344444444433 345788888765432 4567799999999999999999999999999999999999999999999
Q ss_pred hccC----CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 525 LFRQ----EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 525 l~~~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
+.+. ..+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++........
T Consensus 90 l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~-------~~~~~l~d~~~~~~~~~~~~- 158 (258)
T cd08215 90 IKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTS-------NGLVKLGDFGISKVLSSTVD- 158 (258)
T ss_pred HHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcC-------CCcEEECCccceeecccCcc-
Confidence 9764 6789999999999999999999999 9999999999999987 78899999999987654431
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhH
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATK 678 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 678 (725)
......++..|+|||...+..++.++||||+|+++++|++|+.|+..... .+....... ...++...
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 227 (258)
T cd08215 159 LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----------LELALKILKGQYPPIPSQY 227 (258)
T ss_pred eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----------HHHHHHHhcCCCCCCCCCC
Confidence 12234578899999999888899999999999999999999998854321 111111111 12334456
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 679 FERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...+.+++.+|++.+|++|||+.+++++
T Consensus 228 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 228 SSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 6789999999999999999999999875
No 322
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=7.7e-29 Score=262.67 Aligned_cols=253 Identities=20% Similarity=0.225 Sum_probs=183.5
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcC--CceeeeeecccCCCh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKNGTL 521 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~e~~~~gsL 521 (725)
.++.+++|.+...+.+..+|+|.+.... ....+.+.+|+.++++++||||+++++++... +..++||||+++ +|
T Consensus 12 ~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l 90 (316)
T cd07842 12 TYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DL 90 (316)
T ss_pred CcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CH
Confidence 4555666665543456789999887532 33456788999999999999999999999988 789999999986 66
Q ss_pred hhhhccC-----CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 522 SAFLFRQ-----EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 522 ~~~l~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
.+++... ..++...+..++.|++.||.|||+. +|+||||||+||+++.+. +.++.+||+|||+++....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~---~~~~~~kl~Dfg~~~~~~~ 164 (316)
T cd07842 91 WQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEG---PERGVVKIGDLGLARLFNA 164 (316)
T ss_pred HHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCC---CccceEEECCCccccccCC
Confidence 6665322 3678899999999999999999999 999999999999997621 2368899999999987543
Q ss_pred CCC--ccccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc--cCcchHHHHH-----
Q 039817 597 DQT--RTSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA--NGMILTDWVL----- 666 (725)
Q Consensus 597 ~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~--~~~~~~~~~~----- 666 (725)
... .......++..|+|||.+.+. .++.++||||||++++||++|+.|+........... ....+...+.
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 244 (316)
T cd07842 165 PLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTP 244 (316)
T ss_pred CcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCC
Confidence 322 112234578889999988664 578999999999999999999999875543320000 0000000000
Q ss_pred ------------------HHHHcCCCC-----------hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 667 ------------------YCVRTGNLG-----------ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 667 ------------------~~~~~~~~~-----------~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
........+ ......+.+++.+|++.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 245 TEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred chhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000111 0234568899999999999999999999875
No 323
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.96 E-value=8.4e-29 Score=255.34 Aligned_cols=237 Identities=22% Similarity=0.228 Sum_probs=185.3
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc-----cCccHHHHHHHHHHHhccCcCCccceeeEEEcC--CceeeeeecccC
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV-----TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKN 518 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~e~~~~ 518 (725)
..++.++.+++..++ ..+++|.+... ..+..+.+.+|++++++++|+||+++++++... ...++|+||+++
T Consensus 13 g~~g~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~ 90 (264)
T cd06653 13 GAFGEVYLCYDADTG--RELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPG 90 (264)
T ss_pred CCCeEEEEEEEcCCC--CEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCC
Confidence 345566666665444 46778876321 123345789999999999999999999998764 467899999999
Q ss_pred CChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 519 GTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 519 gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
++|.+++.....+++.....++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++......
T Consensus 91 ~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~-------~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 91 GSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDS-------AGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcC-------CCCEEECcccccccccccc
Confidence 99999998777789999999999999999999999 9999999999999987 7789999999998653211
Q ss_pred C--ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH---cCC
Q 039817 599 T--RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR---TGN 673 (725)
Q Consensus 599 ~--~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 673 (725)
. .......++..|+|||.+.+..++.++||||||++++||++|+.|+..... ...+..... ...
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~~~ 229 (264)
T cd06653 161 MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA-----------MAAIFKIATQPTKPM 229 (264)
T ss_pred ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH-----------HHHHHHHHcCCCCCC
Confidence 1 111234578899999999988899999999999999999999999863211 111111111 123
Q ss_pred CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 674 LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 674 ~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
++....+.+.+++.+|++ +|.+||++.+++.+
T Consensus 230 ~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 230 LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred CCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 455677889999999999 57999999998875
No 324
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=5.3e-29 Score=258.72 Aligned_cols=224 Identities=21% Similarity=0.291 Sum_probs=173.9
Q ss_pred cceEEEEEEcc--cccCccHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccCCChhhhhccCCC-CCHHHH
Q 039817 461 QEVEVAVKQLE--KVTGDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEI-PTWDKR 536 (725)
Q Consensus 461 ~~~~vavk~l~--~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-l~~~~~ 536 (725)
+...+|+|++. ..+.+....|.+|+..|.+|+ |.+||+|++|-..++.+||||||-+ .+|..+|.+... ++-..+
T Consensus 384 ~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~~~~~~~l 462 (677)
T KOG0596|consen 384 DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKSIDPDWFL 462 (677)
T ss_pred CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccCCCchHHH
Confidence 34455666543 345666788999999999995 9999999999999999999999865 599999987643 332377
Q ss_pred HHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc-ccccCccccchh
Q 039817 537 VEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST-MIRGTMGYMAPE 615 (725)
Q Consensus 537 ~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~-~~~gt~~y~aPE 615 (725)
..+..|++.++.++|++ +|||.||||.|+|+- .|.+||+|||+|..+..+...... ..+||+.||+||
T Consensus 463 k~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV--------kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPE 531 (677)
T KOG0596|consen 463 KFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV--------KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPE 531 (677)
T ss_pred HHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE--------eeeEEeeeechhcccCccccceeeccccCcccccCHH
Confidence 78889999999999999 999999999999986 689999999999988877665533 366999999999
Q ss_pred cccCC-----------CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc-C--CCCh-hHHH
Q 039817 616 WLRNA-----------PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT-G--NLGA-TKFE 680 (725)
Q Consensus 616 ~~~~~-----------~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~-~~~~ 680 (725)
.+... +.+.+|||||+||+||+|+.|+.||...... ...+...... . .++. ....
T Consensus 532 Al~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~----------~aKl~aI~~P~~~Iefp~~~~~~ 601 (677)
T KOG0596|consen 532 ALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ----------IAKLHAITDPNHEIEFPDIPEND 601 (677)
T ss_pred HHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH----------HHHHHhhcCCCccccccCCCCch
Confidence 88532 3567899999999999999999999632210 0001111100 0 1222 1122
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 681 RITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+++++++.||+.||++|||+.|++++
T Consensus 602 ~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 602 ELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 39999999999999999999999986
No 325
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-29 Score=263.26 Aligned_cols=240 Identities=22% Similarity=0.328 Sum_probs=194.1
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
+....|+.+++|.+. ..+...|-|.++..++...+.|+-|+++|+..+||+||+|++.+...+.++++.|||.||-.+
T Consensus 40 LGDGAFGKVyKA~nk--et~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVD 117 (1187)
T KOG0579|consen 40 LGDGAFGKVYKAVNK--ETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVD 117 (1187)
T ss_pred hcCccchhhhhhhcc--cchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHh
Confidence 345678899999887 344566778888777788889999999999999999999999999999999999999999999
Q ss_pred hhhcc-CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
..+.. .+.+++.++.-++.|++.||.|||++ +|||||||+.|||++. +|.++|+|||.+-..... ...
T Consensus 118 aimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~Tl-------dGdirLADFGVSAKn~~t-~qk 186 (1187)
T KOG0579|consen 118 AIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTL-------DGDIRLADFGVSAKNKST-RQK 186 (1187)
T ss_pred HHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEe-------cCcEeeecccccccchhH-Hhh
Confidence 88755 47899999999999999999999999 9999999999999988 889999999997543211 122
Q ss_pred ccccccCccccchhccc-----CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCC---
Q 039817 602 STMIRGTMGYMAPEWLR-----NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGN--- 673 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~-----~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 673 (725)
...+.||+.|||||+.. ..+|+.++||||||+.|.||.-+.+|-.... ....+.......+
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln-----------pMRVllKiaKSePPTL 255 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN-----------PMRVLLKIAKSEPPTL 255 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc-----------hHHHHHHHhhcCCCcc
Confidence 23467999999999763 5689999999999999999998777654211 1111111111111
Q ss_pred -CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 674 -LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 674 -~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
-|......+.+++..||.+||..||++.++++|
T Consensus 256 lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 256 LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 123556778999999999999999999999976
No 326
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=1e-28 Score=258.94 Aligned_cols=246 Identities=22% Similarity=0.256 Sum_probs=177.6
Q ss_pred HHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
+++++++.+..+ +..|++|.+.... ....+.+.+|++++++++|+||+++++++..+...++||||++ ++|.+++
T Consensus 15 ~~~v~~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~ 91 (294)
T PLN00009 15 YGVVYKARDRVT--NETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHM 91 (294)
T ss_pred CEEEEEEEecCC--CcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHH
Confidence 444555554333 4568888875432 2334678999999999999999999999999999999999996 4788887
Q ss_pred ccCC--CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 526 FRQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 526 ~~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
.... .+++.....++.|++.||+|||+. +++|+||+|+||+++.+ +..+||+|||++........ ...
T Consensus 92 ~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~------~~~~kl~dfg~~~~~~~~~~-~~~ 161 (294)
T PLN00009 92 DSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRR------TNALKLADFGLARAFGIPVR-TFT 161 (294)
T ss_pred HhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECC------CCEEEEcccccccccCCCcc-ccc
Confidence 5543 357788889999999999999999 99999999999999752 56799999999976543211 112
Q ss_pred ccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc--------------cCcchHHHHHHH
Q 039817 604 MIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA--------------NGMILTDWVLYC 668 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 668 (725)
...++..|+|||++.+ ..++.++||||||+++|+|++|+.|+........... ....+.++....
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (294)
T PLN00009 162 HEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAF 241 (294)
T ss_pred cCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhc
Confidence 2346788999998865 4578999999999999999999998864321110000 000000000000
Q ss_pred HH--cC---CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 669 VR--TG---NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 669 ~~--~~---~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.. .. .......+++.+++.+|++.+|++||++.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 242 PKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred ccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 00 0012345678999999999999999999999974
No 327
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=2.3e-28 Score=254.06 Aligned_cols=236 Identities=22% Similarity=0.233 Sum_probs=180.8
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC---ccHHHHHHHHHHH---hccCcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG---DGEKSFLREVQVI---GRTHHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~---~~~~~f~~E~~~l---~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
+|+.++.|.+.- .+..||+|.+..... .....+..|..++ +..+|+||+++++.+..++..++||||+++++
T Consensus 6 ~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~ 83 (278)
T cd05606 6 GFGEVYGCRKAD--TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGD 83 (278)
T ss_pred CCeEEEEEEEec--CCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCc
Confidence 344555444432 345789998764321 2223345554443 44579999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|.+++.+...+++..+..++.|+++||.|||+. +++|+||||+||+++. ++.+||+|||++........
T Consensus 84 L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~-------~~~~kl~dfg~~~~~~~~~~- 152 (278)
T cd05606 84 LHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDE-------HGHVRISDLGLACDFSKKKP- 152 (278)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECC-------CCCEEEccCcCccccCccCC-
Confidence 999998888899999999999999999999998 9999999999999987 78899999999875533221
Q ss_pred cccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH--HcCCCChh
Q 039817 601 TSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV--RTGNLGAT 677 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 677 (725)
....|+..|+|||.+.++ .++.++||||+|++++||++|+.|+........ ....... ....++..
T Consensus 153 --~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~---------~~~~~~~~~~~~~~~~~ 221 (278)
T cd05606 153 --HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---------HEIDRMTLTMAVELPDS 221 (278)
T ss_pred --cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch---------HHHHHHhhccCCCCCCc
Confidence 123588999999998754 689999999999999999999999875422110 0011111 11233444
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 678 KFERITMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 678 ~~~~l~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
....+.+++.+|++.+|.+|| ++.+++++
T Consensus 222 ~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 222 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 568899999999999999999 99999975
No 328
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=1.8e-29 Score=267.20 Aligned_cols=239 Identities=23% Similarity=0.320 Sum_probs=196.5
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccC--ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTG--DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
....|.+++.|+...++ ..||||.+.+... .....+.+|+++|+.+.|||||+++.+.+....+|+||||+.+|.+
T Consensus 65 g~g~f~~V~La~~~~t~--~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~ 142 (596)
T KOG0586|consen 65 GKGNFAKVKLARHILTG--TEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGEL 142 (596)
T ss_pred ccceeEEEEeeEecCCC--ceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchh
Confidence 34556677777777664 5788998876433 3345689999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
.+|+.+.+.........++.|+.+|++|||++ .|+|||||++||||+. +.++||+|||++..+.... .
T Consensus 143 ~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~-------~mnikIaDfgfS~~~~~~~--~ 210 (596)
T KOG0586|consen 143 FDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDE-------NMNIKIADFGFSTFFDYGL--M 210 (596)
T ss_pred HHHHHhcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhccccc-------ccceeeeccccceeecccc--c
Confidence 99999998888899999999999999999999 9999999999999988 7889999999998776332 2
Q ss_pred ccccccCccccchhcccCCCC-CCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHH
Q 039817 602 STMIRGTMGYMAPEWLRNAPV-TAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFE 680 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~~~~-~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (725)
....+|++.|.|||.+.+.++ .++.|+||+|++||-|+.|..||+.....+ +.+.+. ...-.++.....
T Consensus 211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--------Lr~rvl--~gk~rIp~~ms~ 280 (596)
T KOG0586|consen 211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--------LRPRVL--RGKYRIPFYMSC 280 (596)
T ss_pred ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc--------ccchhe--eeeecccceeec
Confidence 344679999999999998876 478999999999999999999998643221 111110 011234445567
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 681 RITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 681 ~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+.+++++++-.+|.+|++++++.++
T Consensus 281 dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 281 DCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred hhHHHHHHhhccCccccCCHHHhhhh
Confidence 88899999999999999999999865
No 329
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-29 Score=239.77 Aligned_cols=227 Identities=25% Similarity=0.352 Sum_probs=178.0
Q ss_pred CcceEEEEEEcccc-cCccHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccCCChhhhhccC-CCCCHHHH
Q 039817 460 GQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKR 536 (725)
Q Consensus 460 ~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~ 536 (725)
..+..+|||.+... +....+.++..++++.+-+ .|.||+.+|+|..+....+.||.|.. .+++.+.+- +++++...
T Consensus 115 s~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLlkrik~piPE~il 193 (391)
T KOG0983|consen 115 STGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-CAEKLLKRIKGPIPERIL 193 (391)
T ss_pred ccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHHHHhcCCchHHhh
Confidence 34578999998654 3445567888999887765 89999999999999999999999964 455555443 67888889
Q ss_pred HHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhc
Q 039817 537 VEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEW 616 (725)
Q Consensus 537 ~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~ 616 (725)
-++...+++||.||.++ .+|+|||+||+|||+|+ .|++|++|||++-.+.... ..+...|-+.|||||.
T Consensus 194 Gk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe-------~GniKlCDFGIsGrlvdSk--AhtrsAGC~~YMaPER 262 (391)
T KOG0983|consen 194 GKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDE-------RGNIKLCDFGISGRLVDSK--AHTRSAGCAAYMAPER 262 (391)
T ss_pred hhhHHHHHHHHHHHHHh--cceeecccCccceEEcc-------CCCEEeecccccceeeccc--ccccccCCccccCccc
Confidence 99999999999999877 48999999999999988 8999999999997654332 2233458889999999
Q ss_pred ccC---CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCC--hhHHHHHHHHHHHccC
Q 039817 617 LRN---APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG--ATKFERITMVGLWCIC 691 (725)
Q Consensus 617 ~~~---~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~cl~ 691 (725)
+.- ..|+.++||||||+.|+||.||+.|+.....+... +...+... ...++ ....+.+++++..||+
T Consensus 263 idp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~------ltkvln~e--PP~L~~~~gFSp~F~~fv~~CL~ 334 (391)
T KOG0983|consen 263 IDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV------LTKVLNEE--PPLLPGHMGFSPDFQSFVKDCLT 334 (391)
T ss_pred cCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH------HHHHHhcC--CCCCCcccCcCHHHHHHHHHHhh
Confidence 863 47899999999999999999999999876544321 11111100 01111 1356789999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 039817 692 PQPTLRPSMKQVLQM 706 (725)
Q Consensus 692 ~dp~~RPs~~evl~~ 706 (725)
+|+.+||...+++++
T Consensus 335 kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 335 KDHRKRPKYNKLLEH 349 (391)
T ss_pred cCcccCcchHHHhcC
Confidence 999999999999876
No 330
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.96 E-value=1.2e-28 Score=257.06 Aligned_cols=247 Identities=24% Similarity=0.258 Sum_probs=183.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcC--CceeeeeecccCCChh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~e~~~~gsL~ 522 (725)
.++.+++++..-. +..+++|.+.... ....+.+.+|++++++++|+|++++++++... +..++||||+++ +|.
T Consensus 11 ~~~~vy~~~~~~~--~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~ 87 (287)
T cd07840 11 TYGQVYKARNKKT--GELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLT 87 (287)
T ss_pred CCeEEEEEEECCC--CeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHH
Confidence 3455555554433 4578899886542 33446788999999999999999999999988 899999999985 898
Q ss_pred hhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+++.+. ..+++..+..++.|+++||+|||+. +++|+||+|+||++++ ++.+||+|||++..........
T Consensus 88 ~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~-------~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 88 GLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINN-------DGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred HHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcC-------CCCEEEccccceeeccCCCccc
Confidence 888765 5789999999999999999999998 9999999999999987 8899999999998765443222
Q ss_pred ccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc-----cCcchHHH--------HHH
Q 039817 602 STMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA-----NGMILTDW--------VLY 667 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~-----~~~~~~~~--------~~~ 667 (725)
.....++..|+|||.+.+ ..++.++||||||++++||++|+.|++.......... .......+ ...
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 223346788999998764 4678999999999999999999998864332110000 00000000 000
Q ss_pred HHH--------cCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 668 CVR--------TGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 668 ~~~--------~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
... ...+.....+.+.+++.+|++.+|.+||++++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000 000111125678999999999999999999999864
No 331
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.96 E-value=1.3e-28 Score=258.32 Aligned_cols=247 Identities=21% Similarity=0.221 Sum_probs=176.8
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCc-----eeeeeecccC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNH-----QLLVYELMKN 518 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~-----~~lV~e~~~~ 518 (725)
.++.++++.+..+ +..|++|.+.... ......+.+|+.+++++ +|+||+++++++...+. .++||||+++
T Consensus 13 ~~g~vy~~~~~~~--~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~ 90 (295)
T cd07837 13 TYGKVYKARDKNT--GKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS 90 (295)
T ss_pred CCeEEEEEEECCC--CcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc
Confidence 4455666655443 3567888765322 22346788999999999 57999999999987665 8999999986
Q ss_pred CChhhhhccC-----CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 519 GTLSAFLFRQ-----EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 519 gsL~~~l~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
+|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.+ ++.+||+|||+++.
T Consensus 91 -~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~------~~~~kl~dfg~~~~ 160 (295)
T cd07837 91 -DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQ------KGLLKIADLGLGRA 160 (295)
T ss_pred -CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecC------CCeEEEeeccccee
Confidence 788887543 3579999999999999999999999 99999999999999763 67899999999886
Q ss_pred cCcCCCccccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc--------------ccC
Q 039817 594 LKKDQTRTSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL--------------ANG 658 (725)
Q Consensus 594 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~--------------~~~ 658 (725)
....... .....+++.|+|||++.+ ..++.++||||||+++|||++|..|+.......... ...
T Consensus 161 ~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 161 FSIPVKS-YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred cCCCccc-cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 5332211 112236778999998865 457899999999999999999998886432110000 000
Q ss_pred cchHHHHHHHH-H---cCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 659 MILTDWVLYCV-R---TGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 659 ~~~~~~~~~~~-~---~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.....+..... . .........+.+.+++.+||+.||.+||+++|++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000000 0 000011345678999999999999999999999865
No 332
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.96 E-value=2.1e-28 Score=263.48 Aligned_cols=244 Identities=24% Similarity=0.240 Sum_probs=180.4
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcC------Cceeeeeeccc
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ------NHQLLVYELMK 517 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~lV~e~~~ 517 (725)
..++.++.+.+..+ +..||+|.+... .....+.+.+|+.++++++|+||+++++++... ...++||||++
T Consensus 27 g~~g~V~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~ 104 (353)
T cd07850 27 GAQGIVCAAYDTVT--GQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD 104 (353)
T ss_pred CCCEEEEEEEECCC--CCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC
Confidence 34555666665544 357899987542 233445788999999999999999999998643 35799999997
Q ss_pred CCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcC
Q 039817 518 NGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKD 597 (725)
Q Consensus 518 ~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~ 597 (725)
+ +|.+.+... ++...+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||+++.....
T Consensus 105 ~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~-------~~~~kL~Dfg~~~~~~~~ 171 (353)
T cd07850 105 A-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKS-------DCTLKILDFGLARTAGTS 171 (353)
T ss_pred C-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECC-------CCCEEEccCccceeCCCC
Confidence 5 888887544 88899999999999999999999 9999999999999987 788999999999865433
Q ss_pred CCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc------cc-cCcchHHH----HH
Q 039817 598 QTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT------LA-NGMILTDW----VL 666 (725)
Q Consensus 598 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~------~~-~~~~~~~~----~~ 666 (725)
.. .....++..|+|||.+.+..++.++||||||+++++|++|+.|+......... .. ......+. ..
T Consensus 172 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
T cd07850 172 FM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR 249 (353)
T ss_pred CC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence 22 12234788999999999999999999999999999999999988643211000 00 00000000 00
Q ss_pred HHHHcCC---------------C-------ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 667 YCVRTGN---------------L-------GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 667 ~~~~~~~---------------~-------~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
....... . .....+.+.+++.+||+.||++|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000 0 11235678999999999999999999999976
No 333
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.96 E-value=5.9e-29 Score=258.53 Aligned_cols=239 Identities=23% Similarity=0.275 Sum_probs=190.5
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
..++.++++++.-+ +..+++|.+... .....+.+.+|++++++++ |+||+++++++..++..++|||++++++|
T Consensus 12 g~~~~vy~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (280)
T cd05581 12 GSFSTVVLAKEKET--NKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGEL 89 (280)
T ss_pred CCceEEEEEEEcCC--CCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcH
Confidence 34555666655443 456777876542 2234567899999999998 99999999999999999999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC--
Q 039817 522 SAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT-- 599 (725)
Q Consensus 522 ~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~-- 599 (725)
.+++.+...+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.++++|||++........
T Consensus 90 ~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~-------~~~~~l~df~~~~~~~~~~~~~ 159 (280)
T cd05581 90 LQYIRKYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDK-------DMHIKITDFGTAKVLDPNSSPE 159 (280)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECC-------CCCEEecCCccccccCCccccc
Confidence 99998888899999999999999999999998 9999999999999987 78999999999886543321
Q ss_pred -----------------ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchH
Q 039817 600 -----------------RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILT 662 (725)
Q Consensus 600 -----------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~ 662 (725)
.......++..|+|||......++.++||||||++++++++|+.|+...... . ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~-~~ 231 (280)
T cd05581 160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY-------L-TF 231 (280)
T ss_pred cCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-------H-HH
Confidence 1112345788999999998888999999999999999999999998744310 0 00
Q ss_pred HHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCH----HHHHHH
Q 039817 663 DWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSM----KQVLQM 706 (725)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~----~evl~~ 706 (725)
.... .....++...++.+.+++.+||+.+|.+||++ ++++++
T Consensus 232 ~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 232 QKIL--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHH--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 1111 12234555667889999999999999999999 777764
No 334
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-28 Score=244.71 Aligned_cols=229 Identities=25% Similarity=0.289 Sum_probs=176.9
Q ss_pred eEEEEEEccc-ccCccHHHHHHHHHHHhccCcCCccceeeEEEcC-CceeeeeecccCCChhhhhc-----cC---CCCC
Q 039817 463 VEVAVKQLEK-VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ-NHQLLVYELMKNGTLSAFLF-----RQ---EIPT 532 (725)
Q Consensus 463 ~~vavk~l~~-~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lV~e~~~~gsL~~~l~-----~~---~~l~ 532 (725)
+.|-||.++. .++-+...|+.|.-.+..++|||+.++.+++.+. ...+++|.++.-|+|+.||. +. +.++
T Consensus 315 q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvt 394 (563)
T KOG1024|consen 315 QEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVT 394 (563)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchh
Confidence 3455555543 2333445688899999999999999999999864 57899999999999999997 21 3567
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcccc-CcCCCccccccccCccc
Q 039817 533 WDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL-KKDQTRTSTMIRGTMGY 611 (725)
Q Consensus 533 ~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~-~~~~~~~~~~~~gt~~y 611 (725)
-.+...++.|++.|++|||+. ++||.||.++|+++|+ ..++||+|-.+++-+ ..+..........+..|
T Consensus 395 t~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd-------~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkW 464 (563)
T KOG1024|consen 395 TIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDD-------QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKW 464 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehh-------heeEEeccchhccccCcccccccCCCCCCcccc
Confidence 788999999999999999999 9999999999999988 899999999999854 33332222223357789
Q ss_pred cchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHcc
Q 039817 612 MAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCI 690 (725)
Q Consensus 612 ~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 690 (725)
|+||.+.+..|+.++||||||++||||+| |+.|+..-++. .+..++.+-.+ -.-|-..++++..++.-||
T Consensus 465 MslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf--------Em~~ylkdGyR-laQP~NCPDeLf~vMacCW 535 (563)
T KOG1024|consen 465 MSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF--------EMEHYLKDGYR-LAQPFNCPDELFTVMACCW 535 (563)
T ss_pred cCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH--------HHHHHHhccce-ecCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999997 55665422111 11111111110 1234467899999999999
Q ss_pred CCCCCCCCCHHHHHHHhcCC
Q 039817 691 CPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 691 ~~dp~~RPs~~evl~~L~~~ 710 (725)
...|++||+++|++.-|.+.
T Consensus 536 allpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 536 ALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred hcCcccCCCHHHHHHHHHHH
Confidence 99999999999999988653
No 335
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.96 E-value=1.1e-28 Score=260.79 Aligned_cols=240 Identities=21% Similarity=0.264 Sum_probs=176.2
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCC--------ceeeeeec
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN--------HQLLVYEL 515 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--------~~~lV~e~ 515 (725)
..++.+++|.+..+ +..||||.+... .......+.+|++++++++||||++++++|.... ..++||||
T Consensus 23 g~~~~v~~~~~~~~--~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~ 100 (310)
T cd07865 23 GTFGEVFKARHKKT--KQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEF 100 (310)
T ss_pred CCCEEEEEEEECCC--CcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcC
Confidence 34555666655543 457888877532 2223445678999999999999999999987654 45999999
Q ss_pred ccCCChhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcccc
Q 039817 516 MKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL 594 (725)
Q Consensus 516 ~~~gsL~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~ 594 (725)
+++ +|.+++... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++...
T Consensus 101 ~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~-------~~~~kl~dfg~~~~~ 169 (310)
T cd07865 101 CEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITK-------DGILKLADFGLARAF 169 (310)
T ss_pred CCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECC-------CCcEEECcCCCcccc
Confidence 975 788777654 3689999999999999999999999 9999999999999987 789999999999865
Q ss_pred CcCCCc---cccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHH--
Q 039817 595 KKDQTR---TSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYC-- 668 (725)
Q Consensus 595 ~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 668 (725)
...... ......++..|+|||.+.+. .++.++||||||++++||++|+.++........ ...+...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~--------~~~~~~~~~ 241 (310)
T cd07865 170 SLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQ--------LTLISQLCG 241 (310)
T ss_pred cCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--------HHHHHHHhC
Confidence 432221 11223467889999988654 478899999999999999999988764321100 0000000
Q ss_pred ---------------HHcCCC-------------ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 669 ---------------VRTGNL-------------GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 669 ---------------~~~~~~-------------~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...... .......+.+++.+||+.||.+|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000000 00123567789999999999999999999875
No 336
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.96 E-value=2.4e-28 Score=257.19 Aligned_cols=239 Identities=23% Similarity=0.260 Sum_probs=178.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCC----------ceeeeee
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN----------HQLLVYE 514 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----------~~~lV~e 514 (725)
.++.+++++..-+ +..|++|.++... ......+.+|++++++++||||+++++++.... ..++|+|
T Consensus 19 ~~g~v~~~~~~~~--~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e 96 (302)
T cd07864 19 TYGQVYKARDKDT--GELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFE 96 (302)
T ss_pred CCEEEEEEEECCC--CcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEc
Confidence 4455555555433 3467888875432 333457789999999999999999999987654 7899999
Q ss_pred cccCCChhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 515 LMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 515 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
|+++ +|.+.+... ..+++..+..++.|++.||+|||+. +|+|+||||+||++++ ++.+||+|||++..
T Consensus 97 ~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~-------~~~~kl~dfg~~~~ 165 (302)
T cd07864 97 YMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNN-------KGQIKLADFGLARL 165 (302)
T ss_pred ccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC-------CCcEEeCccccccc
Confidence 9986 676766554 5689999999999999999999999 9999999999999987 78999999999987
Q ss_pred cCcCCCccccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc-
Q 039817 594 LKKDQTRTSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT- 671 (725)
Q Consensus 594 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 671 (725)
.............++..|+|||.+.+ ..++.++||||||++++||++|+.|+....... ....+......
T Consensus 166 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~--------~~~~~~~~~~~~ 237 (302)
T cd07864 166 YNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA--------QLELISRLCGSP 237 (302)
T ss_pred ccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHHHhCCC
Confidence 65433222222335778999998864 457899999999999999999998886432110 00000000000
Q ss_pred ---------------------------CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 672 ---------------------------GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 672 ---------------------------~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.......+..+.+++..||+.+|.+||++++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred ChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00011235678999999999999999999999865
No 337
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.96 E-value=1.8e-28 Score=255.48 Aligned_cols=237 Identities=23% Similarity=0.323 Sum_probs=178.6
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHH-HhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQV-IGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
..|++++++.+..+ +..||+|.++... ......+..|+.. ++.++|+||+++++++..++..++||||++ ++|.+
T Consensus 12 g~~g~v~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~ 88 (283)
T cd06617 12 GAYGVVDKMRHVPT--GTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDK 88 (283)
T ss_pred cCCeEEEEEEEcCC--CcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHH
Confidence 34566666665533 4678899876432 2344567777776 555789999999999999999999999997 58877
Q ss_pred hhcc----CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 524 FLFR----QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 524 ~l~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
++.. ...+++..+..++.|++.||.|||+. .+++||||||+||+++. ++.+||+|||++........
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~-------~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 89 FYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINR-------NGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECC-------CCCEEEeecccccccccccc
Confidence 7643 24689999999999999999999974 27999999999999987 78999999999986543221
Q ss_pred ccccccccCccccchhcccC----CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CC
Q 039817 600 RTSTMIRGTMGYMAPEWLRN----APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GN 673 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~----~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 673 (725)
.....++..|+|||.+.+ ..++.++|+||||+++|||++|+.|+...... .+........ ..
T Consensus 160 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----------~~~~~~~~~~~~~~ 227 (283)
T cd06617 160 --KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP----------FQQLKQVVEEPSPQ 227 (283)
T ss_pred --cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC----------HHHHHHHHhcCCCC
Confidence 122347888999998865 45688999999999999999999998532211 0111111111 11
Q ss_pred CC-hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 674 LG-ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 674 ~~-~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+ ...++.+.+++.+||+.+|++||++++++++
T Consensus 228 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 228 LPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 2345789999999999999999999999874
No 338
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=2.4e-28 Score=258.12 Aligned_cols=248 Identities=25% Similarity=0.241 Sum_probs=179.1
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcC--CceeeeeecccCCC
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--NHQLLVYELMKNGT 520 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~e~~~~gs 520 (725)
...++.++++.+..++ ..||+|.+.... ......+.+|++++++++|+||+++++++... +..++||||+++ +
T Consensus 17 ~g~~~~v~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~ 93 (309)
T cd07845 17 EGTYGIVYRARDTTSG--EIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-D 93 (309)
T ss_pred ecCCEEEEEEEECCCC--cEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-C
Confidence 3455666666655444 467888775322 22234567899999999999999999998765 468999999975 7
Q ss_pred hhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 521 LSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 521 L~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
|.+++... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++........
T Consensus 94 l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~-------~~~~kL~dfg~~~~~~~~~~ 163 (309)
T cd07845 94 LASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTD-------KGCLKIADFGLARTYGLPAK 163 (309)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC-------CCCEEECccceeeecCCccC
Confidence 88887653 6789999999999999999999999 9999999999999987 78999999999987653321
Q ss_pred ccccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc--cc--CcchHHHHHHHH-----
Q 039817 600 RTSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL--AN--GMILTDWVLYCV----- 669 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~----- 669 (725)
. .....++..|+|||.+.+ ..++.++||||||+++|||++|+.|+.......... .. .... .......
T Consensus 164 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 241 (309)
T cd07845 164 P-MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPN-ESIWPGFSDLPL 241 (309)
T ss_pred C-CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC-hhhchhhhcccc
Confidence 1 122235778999999865 467899999999999999999999886432111000 00 0000 0000000
Q ss_pred ------HcCCC------ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 670 ------RTGNL------GATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 670 ------~~~~~------~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
..... .....+.+.+++.+|++.||++|||++|++++-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~ 291 (309)
T cd07845 242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS 291 (309)
T ss_pred cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 00000 011356678899999999999999999999763
No 339
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=1.4e-28 Score=249.44 Aligned_cols=206 Identities=22% Similarity=0.174 Sum_probs=165.9
Q ss_pred ceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHH
Q 039817 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIAL 541 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~ 541 (725)
+..+++|.+.... .+.+|...+....||||+++++++...+..++||||+++++|.+++.+...+++..+..++.
T Consensus 18 ~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ 92 (237)
T cd05576 18 QQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAA 92 (237)
T ss_pred CcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHH
Confidence 3468999886432 34455566666679999999999999999999999999999999998777899999999999
Q ss_pred HHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCCC
Q 039817 542 GIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP 621 (725)
Q Consensus 542 qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 621 (725)
|+++||.|||+. +++||||||+||+++. ++.++++|||.+....... ....++..|+|||.+....
T Consensus 93 ql~~~l~~lH~~---~i~H~dlkp~Nil~~~-------~~~~~l~df~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~ 158 (237)
T cd05576 93 EMVVALDALHRE---GIVCRDLNPNNILLDD-------RGHIQLTYFSRWSEVEDSC----DGEAVENMYCAPEVGGISE 158 (237)
T ss_pred HHHHHHHHHHhC---CeeccCCCHHHEEEcC-------CCCEEEecccchhcccccc----ccCCcCccccCCcccCCCC
Confidence 999999999998 9999999999999987 7789999999876554321 1223567799999998888
Q ss_pred CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCH
Q 039817 622 VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSM 700 (725)
Q Consensus 622 ~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~ 700 (725)
++.++||||+|++++||++|+.++........ .. .....+....+.+.+++.+|++.||++||++
T Consensus 159 ~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---~~-----------~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 159 ETEACDWWSLGAILFELLTGKTLVECHPSGIN---TH-----------TTLNIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred CCchhhHHHHHHHHHHHHHCcchhhcCchhcc---cc-----------cccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 99999999999999999999987653211100 00 0112334456778999999999999999997
No 340
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=1.5e-28 Score=262.78 Aligned_cols=242 Identities=24% Similarity=0.264 Sum_probs=182.9
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCcc--------------HHHHHHHHHHHhccCcCCccceeeEEEcCCcee
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGDG--------------EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQL 510 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~--------------~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 510 (725)
..+++.++++.+... +..||||.+....... ...+.+|++++++++|+||+++++++..++..+
T Consensus 19 ~G~~g~vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 96 (335)
T PTZ00024 19 EGTYGKVEKAYDTLT--GKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDFIN 96 (335)
T ss_pred CCCceeEEEEEECCC--CCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCcEE
Confidence 345666666665543 4567888775432211 125789999999999999999999999999999
Q ss_pred eeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccC
Q 039817 511 LVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGL 590 (725)
Q Consensus 511 lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgl 590 (725)
+||||++ ++|.+++.....+++.....++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||+
T Consensus 97 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~-------~~~~kl~dfg~ 165 (335)
T PTZ00024 97 LVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINS-------KGICKIADFGL 165 (335)
T ss_pred EEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECC-------CCCEEECCccc
Confidence 9999997 59999998777899999999999999999999998 9999999999999987 78999999999
Q ss_pred ccccCcCC-------------CccccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc
Q 039817 591 AKLLKKDQ-------------TRTSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA 656 (725)
Q Consensus 591 a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~ 656 (725)
+....... ........++..|+|||.+.+. .++.++||||||++++||++|+.|+........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~--- 242 (335)
T PTZ00024 166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ--- 242 (335)
T ss_pred eeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---
Confidence 98654111 1111123367789999998764 468999999999999999999998864432110
Q ss_pred cCcchHHHHHHHHHc-------------------C-------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 657 NGMILTDWVLYCVRT-------------------G-------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 657 ~~~~~~~~~~~~~~~-------------------~-------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
...+...... . .......+.+.+++.+|++.+|++||+++|++.+-
T Consensus 243 -----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 243 -----LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred -----HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 0000000000 0 00112356788999999999999999999999754
No 341
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.96 E-value=2.5e-28 Score=255.90 Aligned_cols=213 Identities=18% Similarity=0.157 Sum_probs=158.4
Q ss_pred HHHHHHhccCcCCccceeeEEEcCC----ceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCce
Q 039817 483 REVQVIGRTHHKNLVQLLGFCIEQN----HQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQI 558 (725)
Q Consensus 483 ~E~~~l~~l~H~niv~l~g~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i 558 (725)
.+...+..++|+|++++++.+.... ..++++|++.. ++.+.+......++..+..++.|++.||.|||+. +|
T Consensus 72 ~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i 147 (294)
T PHA02882 72 ALWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH---GI 147 (294)
T ss_pred HHHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 3344556678999999999876543 34677777654 6666665555568888999999999999999999 99
Q ss_pred eecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC------ccccccccCccccchhcccCCCCCCccceehhH
Q 039817 559 IHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT------RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632 (725)
Q Consensus 559 vH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G 632 (725)
+||||||+|||++. ++.+||+|||+++.+..... .......||+.|+|||.+.+..++.++||||||
T Consensus 148 iHrDiKp~Nill~~-------~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG 220 (294)
T PHA02882 148 SHGDIKPENIMVDG-------NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLG 220 (294)
T ss_pred ecCCCCHHHEEEcC-------CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHH
Confidence 99999999999987 77899999999986643221 111224599999999999999999999999999
Q ss_pred HHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 633 VMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 633 ~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
++++||++|+.||.......... .....++..+...........++.+.+++..|++.+|++||++.++++.|+
T Consensus 221 ~~l~el~~g~~P~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 221 YCMLKWAGIKLPWKGFGHNGNLI--HAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHHHHhCCCCCCccccchHHH--HHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 99999999999997553221100 001112222221111112234678999999999999999999999999874
No 342
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.95 E-value=3e-28 Score=248.85 Aligned_cols=232 Identities=25% Similarity=0.235 Sum_probs=184.8
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccccC---ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVTG---DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
++.++.+++.. .+..+++|.+..... .....+..|++++++++|+||+++++.+..++..++||||+++++|.++
T Consensus 6 ~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 83 (250)
T cd05123 6 FGKVLLVRKKD--TGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSH 83 (250)
T ss_pred ceEEEEEEECC--CCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHH
Confidence 33444444432 345788887754322 2456789999999999999999999999999999999999999999999
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
+.....+++.....++.|++.||.|||+. +++|+||+|+||+++. ++.++|+|||++........ ....
T Consensus 84 l~~~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~-------~~~~~l~d~~~~~~~~~~~~-~~~~ 152 (250)
T cd05123 84 LSKEGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDA-------DGHIKLTDFGLAKELSSEGS-RTNT 152 (250)
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcC-------CCcEEEeecCcceecccCCC-cccC
Confidence 98887899999999999999999999998 9999999999999987 77899999999986544321 1223
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHH
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITM 684 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 684 (725)
..++..|+|||.+.+...+.++|+||||++++|+++|+.|+..... ......+.. ....++...+..+.+
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~--~~~~~~~~~~~~l~~ 222 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYEKILK--DPLRFPEFLSPEARD 222 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHhc--CCCCCCCCCCHHHHH
Confidence 4578899999999888889999999999999999999999864321 011111111 123445555788999
Q ss_pred HHHHccCCCCCCCCCHHH
Q 039817 685 VGLWCICPQPTLRPSMKQ 702 (725)
Q Consensus 685 l~~~cl~~dp~~RPs~~e 702 (725)
++.+|+..||++||++.+
T Consensus 223 ~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 223 LISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHhcCCHhhCCCccc
Confidence 999999999999999943
No 343
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.95 E-value=1.1e-28 Score=263.67 Aligned_cols=248 Identities=22% Similarity=0.274 Sum_probs=183.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEc----CCceeeeeecccCCC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIE----QNHQLLVYELMKNGT 520 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lV~e~~~~gs 520 (725)
.++.++.+++..+ +..|++|.+.... ....+.+.+|+.++++++|+||+++++++.. ....++||||+. ++
T Consensus 17 ~~g~v~~~~~~~~--~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~ 93 (334)
T cd07855 17 AYGVVCSAIDTRS--GKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SD 93 (334)
T ss_pred CCeEEEEEEEcCC--CCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hh
Confidence 3445555555444 3578889876432 2345678899999999999999999998763 346799999996 58
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|.+++.....+++..+..++.|+++||.|||+. +|+||||||+||+++. ++.+||+|||++.........
T Consensus 94 l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~-------~~~~kl~dfg~~~~~~~~~~~ 163 (334)
T cd07855 94 LHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNE-------DCELRIGDFGMARGLSSSPTE 163 (334)
T ss_pred HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcC-------CCcEEecccccceeecccCcC
Confidence 999998778899999999999999999999998 9999999999999987 889999999999765432221
Q ss_pred c---ccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc------------ccCcchHHH
Q 039817 601 T---STMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL------------ANGMILTDW 664 (725)
Q Consensus 601 ~---~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~------------~~~~~~~~~ 664 (725)
. .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... .......+.
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 243 (334)
T cd07855 164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDR 243 (334)
T ss_pred CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhh
Confidence 1 122458889999998865 468899999999999999999999986532211000 000000111
Q ss_pred HHHHHHc----CCCC-----hhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 665 VLYCVRT----GNLG-----ATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 665 ~~~~~~~----~~~~-----~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
+...... ...+ ...++.+.+++.+|++.+|++||++++++.+-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 244 VRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred HHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 1111110 1111 22467899999999999999999999999853
No 344
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.3e-29 Score=264.45 Aligned_cols=215 Identities=22% Similarity=0.264 Sum_probs=180.0
Q ss_pred ceEEEEEEcccccCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHH
Q 039817 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~ 540 (725)
....+||++.+. ...-.+|+.++.+. +|+||+++.+.+.++.+.++|||.+.++-|.+.+...+... ..+.+|+
T Consensus 347 ~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~ 421 (612)
T KOG0603|consen 347 DQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWA 421 (612)
T ss_pred ccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhH-HHHHHHH
Confidence 345677777654 22335677777766 79999999999999999999999999998888887766555 8888999
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEec-cCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccC
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLD-NNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRN 619 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~-~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 619 (725)
.+++.++.|||++ +++||||||+|||++ + .++++|+|||.++....+ ....+-|..|.|||.+..
T Consensus 422 ~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~-------~g~lrltyFG~a~~~~~~----~~tp~~t~~y~APEvl~~ 487 (612)
T KOG0603|consen 422 AELVSAVDYLHEQ---GVVHRDLKPGNILLDGS-------AGHLRLTYFGFWSELERS----CDTPALTLQYVAPEVLAI 487 (612)
T ss_pred HHHHHHHHHHHhc---CeeecCCChhheeecCC-------CCcEEEEEechhhhCchh----hcccchhhcccChhhhcc
Confidence 9999999999999 999999999999995 4 789999999999976655 122346788999999999
Q ss_pred CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCC
Q 039817 620 APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPS 699 (725)
Q Consensus 620 ~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs 699 (725)
..+++++|+||||++||+|++|+.|+.....+ ..+...+..+......++..++|+.+||+.||.+||+
T Consensus 488 ~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-----------~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~ 556 (612)
T KOG0603|consen 488 QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-----------IEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLG 556 (612)
T ss_pred CCCCcchhhHHHHHHHHHHHhCCCccccCCch-----------HHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcC
Confidence 99999999999999999999999999865432 2344445556666778889999999999999999999
Q ss_pred HHHHHHH
Q 039817 700 MKQVLQM 706 (725)
Q Consensus 700 ~~evl~~ 706 (725)
|.++..+
T Consensus 557 ~~~i~~h 563 (612)
T KOG0603|consen 557 ADEIGAH 563 (612)
T ss_pred hhhhccC
Confidence 9999876
No 345
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.95 E-value=1.5e-28 Score=262.96 Aligned_cols=251 Identities=25% Similarity=0.287 Sum_probs=185.0
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcC-----CceeeeeecccCC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ-----NHQLLVYELMKNG 519 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~~lV~e~~~~g 519 (725)
.++.++.+.+.. .+..|+||.+... .......+.+|+.++++++|+||+++++++... ...++||||+. +
T Consensus 17 ~~~~vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~ 93 (337)
T cd07858 17 AYGIVCSAKNSE--TNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-T 93 (337)
T ss_pred CCeEEEEEEecC--CCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-C
Confidence 455556555543 3457888887642 233455678999999999999999999988754 35799999997 6
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 520 sL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
+|.+++.....+++.....++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||+++.......
T Consensus 94 ~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~-------~~~~kL~Dfg~~~~~~~~~~ 163 (337)
T cd07858 94 DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNA-------NCDLKICDFGLARTTSEKGD 163 (337)
T ss_pred CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcC-------CCCEEECcCccccccCCCcc
Confidence 8999998878899999999999999999999999 9999999999999987 78899999999986543321
Q ss_pred ccccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc--------------c--ccCcchH
Q 039817 600 RTSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT--------------L--ANGMILT 662 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~--------------~--~~~~~~~ 662 (725)
......++..|+|||.+.+ ..++.++||||||+++++|++|+.|+......... . .......
T Consensus 164 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (337)
T cd07858 164 -FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKAR 242 (337)
T ss_pred -cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhh
Confidence 1222347888999998765 46899999999999999999999998643211000 0 0000000
Q ss_pred HHHHHHHHcCC-----CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hcCCC
Q 039817 663 DWVLYCVRTGN-----LGATKFERITMVGLWCICPQPTLRPSMKQVLQM--LEGTS 711 (725)
Q Consensus 663 ~~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~--L~~~~ 711 (725)
.++........ ......+.+.+++.+||+.+|++|||++|++++ ++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 243 RYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred HHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 11100000000 011345678999999999999999999999988 65543
No 346
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.95 E-value=6.4e-28 Score=254.66 Aligned_cols=222 Identities=24% Similarity=0.299 Sum_probs=174.3
Q ss_pred ceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhcc-CCCCCHHHHH
Q 039817 462 EVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR-QEIPTWDKRV 537 (725)
Q Consensus 462 ~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~ 537 (725)
+..+++|.+... .....+.+.+|++++++++|+|++++++++..++..++||||+. |+|.+++.. ...+++..+.
T Consensus 40 ~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~ 118 (308)
T cd06634 40 SEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIA 118 (308)
T ss_pred CcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHH
Confidence 356788877532 22234568899999999999999999999999999999999997 578777643 4568999999
Q ss_pred HHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcc
Q 039817 538 EIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617 (725)
Q Consensus 538 ~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~ 617 (725)
.++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++...... ....++..|+|||.+
T Consensus 119 ~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~-------~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~ 183 (308)
T cd06634 119 AVTHGALQGLAYLHSH---NMIHRDVKAGNILLSE-------PGLVKLGDFGSASIMAPA-----NXFVGTPYWMAPEVI 183 (308)
T ss_pred HHHHHHHHHHHHHHhC---CcccCCCCHHhEEECC-------CCcEEECCcccceeecCc-----ccccCCccccCHHHH
Confidence 9999999999999998 9999999999999977 788999999998765432 223478899999987
Q ss_pred c---CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC---CCChhHHHHHHHHHHHccC
Q 039817 618 R---NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG---NLGATKFERITMVGLWCIC 691 (725)
Q Consensus 618 ~---~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~ 691 (725)
. ...++.++||||||+++|||++|+.|+...... +......... .........+.+++.+||+
T Consensus 184 ~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 252 (308)
T cd06634 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----------SALYHIAQNESPALQSGHWSEYFRNFVDSCLQ 252 (308)
T ss_pred hhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-----------HHHHHHhhcCCCCcCcccccHHHHHHHHHHhh
Confidence 4 356788999999999999999999987543211 0111111111 1122456778999999999
Q ss_pred CCCCCCCCHHHHHHHhcCC
Q 039817 692 PQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 692 ~dp~~RPs~~evl~~L~~~ 710 (725)
.+|++||++.+++++.--.
T Consensus 253 ~~P~~Rp~~~~ll~~~~~~ 271 (308)
T cd06634 253 KIPQDRPTSEVLLKHRFVL 271 (308)
T ss_pred CCcccCCCHHHHhhCcccc
Confidence 9999999999999885433
No 347
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.7e-28 Score=247.63 Aligned_cols=254 Identities=24% Similarity=0.326 Sum_probs=196.1
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccccCcc-----HHHHHHHHHHHhccCcCCccceeeEEE-cCCceeeeeecc
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKVTGDG-----EKSFLREVQVIGRTHHKNLVQLLGFCI-EQNHQLLVYELM 516 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~-----~~~f~~E~~~l~~l~H~niv~l~g~~~-~~~~~~lV~e~~ 516 (725)
+.+..|+||++|.+......++|+|..+.+.-.+. .+...+|.++-+.|+||.||++|+++. +.+.+|-|.||+
T Consensus 471 LGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYc 550 (775)
T KOG1151|consen 471 LGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYC 550 (775)
T ss_pred hccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeec
Confidence 35678999999999887766666665564432222 234678999999999999999999997 456889999999
Q ss_pred cCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 517 KNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 517 ~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
++.+|+-||..++.++++....|+.||+.||.||.+. .++|||-||||.||||.+. +.-+.+||.||||++++..
T Consensus 551 eGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~G----tacGeIKITDFGLSKIMdd 625 (775)
T KOG1151|consen 551 EGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNG----TACGEIKITDFGLSKIMDD 625 (775)
T ss_pred CCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecC----cccceeEeeecchhhhccC
Confidence 9999999999999999999999999999999999986 6799999999999999764 3478999999999999876
Q ss_pred CCCcc------ccccccCccccchhcccC----CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHH
Q 039817 597 DQTRT------STMIRGTMGYMAPEWLRN----APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVL 666 (725)
Q Consensus 597 ~~~~~------~~~~~gt~~y~aPE~~~~----~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (725)
+.... .....||..|++||.+.- .+++.|.||||.||++|..+.|+.||.-.......+...-.+.
T Consensus 626 dSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlk---- 701 (775)
T KOG1151|consen 626 DSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK---- 701 (775)
T ss_pred CccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhc----
Confidence 54432 234679999999998853 3578899999999999999999999974432211111100000
Q ss_pred HHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 039817 667 YCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705 (725)
Q Consensus 667 ~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 705 (725)
..-..-+..+....+...+|++||+..-++|....++..
T Consensus 702 AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 702 ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred ceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 000011122245567889999999999999998888765
No 348
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.95 E-value=3.5e-28 Score=257.21 Aligned_cols=232 Identities=25% Similarity=0.302 Sum_probs=179.5
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccC---ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTG---DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
.+++.++.+++..+ +..|++|.+..... ...+.+.+|++++++++|+|++++++++.+++..++||||+. ++|.
T Consensus 32 g~~g~v~~~~~~~~--~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~ 108 (313)
T cd06633 32 GSFGAVYFATNSHT--NEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSAS 108 (313)
T ss_pred CCCeEEEEEEECCC--CcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHH
Confidence 35556666665444 35678888754322 233568899999999999999999999999999999999996 4777
Q ss_pred hhhcc-CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++......
T Consensus 109 ~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~-------~~~~kL~dfg~~~~~~~~---- 174 (313)
T cd06633 109 DLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTE-------PGQVKLADFGSASKSSPA---- 174 (313)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECC-------CCCEEEeecCCCcccCCC----
Confidence 77654 45689999999999999999999998 9999999999999977 778999999998643221
Q ss_pred ccccccCccccchhccc---CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC---CCC
Q 039817 602 STMIRGTMGYMAPEWLR---NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG---NLG 675 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~---~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 675 (725)
....++..|+|||++. ...++.++||||||++++||++|..|+...... .......... ...
T Consensus 175 -~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~ 242 (313)
T cd06633 175 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----------SALYHIAQNDSPTLQS 242 (313)
T ss_pred -CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH-----------HHHHHHHhcCCCCCCc
Confidence 2245788999999984 456889999999999999999999988643211 1111111111 111
Q ss_pred hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 676 ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 676 ~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
......+.+++.+||+.+|.+||++.+++++
T Consensus 243 ~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 243 NEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2334578999999999999999999999976
No 349
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.95 E-value=3.7e-29 Score=242.66 Aligned_cols=256 Identities=21% Similarity=0.238 Sum_probs=192.0
Q ss_pred cccccHHHHHHHhcccCCc--ceEEEEEEcccccCc--cHHHHHHHHHHHhccCcCCccceeeEEEc-CCceeeeeeccc
Q 039817 443 MKVFSYQELREATNVFDGQ--EVEVAVKQLEKVTGD--GEKSFLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELMK 517 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~--~~~vavk~l~~~~~~--~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~e~~~ 517 (725)
+.+.+|+.+++|...-... ...+|+|+++..... ......+|+.+++.++|+|++.|..++.. +...+|++||.+
T Consensus 32 Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAE 111 (438)
T KOG0666|consen 32 IGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAE 111 (438)
T ss_pred ecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhh
Confidence 5678899999996655544 348899999754322 23457799999999999999999999887 778999999999
Q ss_pred CCChhhhhccC-----CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcc
Q 039817 518 NGTLSAFLFRQ-----EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAK 592 (725)
Q Consensus 518 ~gsL~~~l~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~ 592 (725)
. +|...++-+ +.++-..+..|+.||+.|+.|||++ -|+||||||.|||+..+. .+.|.+||+|+|+++
T Consensus 112 h-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdg---perG~VKIaDlGlaR 184 (438)
T KOG0666|consen 112 H-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDG---PERGRVKIADLGLAR 184 (438)
T ss_pred h-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccC---CccCeeEeecccHHH
Confidence 8 777776432 4678889999999999999999999 999999999999997642 226999999999999
Q ss_pred ccCcCCCcc--ccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHH
Q 039817 593 LLKKDQTRT--STMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCV 669 (725)
Q Consensus 593 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (725)
++.+.-... ...++-|.-|.|||.+.+. .|+++.|||+.||++.||++-.+.|...+...... .....+.+.+.+
T Consensus 185 ~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~--~Pfq~dQl~rIf 262 (438)
T KOG0666|consen 185 LFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTK--NPFQHDQLDRIF 262 (438)
T ss_pred HhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccC--CCchHHHHHHHH
Confidence 887653322 2235578899999998875 68999999999999999999998887654332211 011111111111
Q ss_pred Hc-C-----------CCCh--------------------------hHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 670 RT-G-----------NLGA--------------------------TKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 670 ~~-~-----------~~~~--------------------------~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
.- + .+|. ...+...+|+.++|+.||.+|.|+++.+++.
T Consensus 263 ~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 263 EVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 10 0 0000 1122367788999999999999999998875
No 350
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.95 E-value=7.9e-28 Score=250.80 Aligned_cols=246 Identities=22% Similarity=0.278 Sum_probs=180.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC-ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL 525 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l 525 (725)
.++.+++|++..+ +..|+||.+..... ...+.+.+|++++++++|+||+++++++...+..++||||+++ +|.+++
T Consensus 12 ~~~~v~~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~ 88 (284)
T cd07836 12 TYATVYKGRNRTT--GEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYM 88 (284)
T ss_pred CceEEEEEEECCC--CeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHH
Confidence 3445556665433 45788888764332 2346788999999999999999999999999999999999985 888887
Q ss_pred ccC---CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 526 FRQ---EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 526 ~~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
... ..+++..+..++.|+++||.|||+. +++|+||||+||+++. ++.+||+|||++........ ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~-------~~~~~l~d~g~~~~~~~~~~-~~ 157 (284)
T cd07836 89 DTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINK-------RGELKLADFGLARAFGIPVN-TF 157 (284)
T ss_pred HhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECC-------CCcEEEeecchhhhhcCCcc-cc
Confidence 653 3589999999999999999999998 9999999999999987 78899999999976533221 11
Q ss_pred cccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc--c--CcchHHHHHHHHH----cCC
Q 039817 603 TMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA--N--GMILTDWVLYCVR----TGN 673 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~----~~~ 673 (725)
....++..|++||.+.+. .++.++||||||+++|||++|+.|+......+.... . ............. ...
T Consensus 158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07836 158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPT 237 (284)
T ss_pred ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccc
Confidence 223467889999988654 568899999999999999999998865432110000 0 0000000000000 000
Q ss_pred -----------CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 674 -----------LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 674 -----------~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+.......+.+++.+|++.||.+||+++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 238 FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred ccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 011235678899999999999999999999864
No 351
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.95 E-value=8.2e-28 Score=257.11 Aligned_cols=251 Identities=24% Similarity=0.296 Sum_probs=180.7
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccCcCCccceeeEEEcCC-----ceeeeeecccCCC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN-----HQLLVYELMKNGT 520 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lV~e~~~~gs 520 (725)
.++.++.+.+..+ +..||+|.+.... ......+.+|+.++++++|+||+++++++.... ..++|+||+++ +
T Consensus 17 ~~g~vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~ 93 (336)
T cd07849 17 AYGMVCSATHKPT--GVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-D 93 (336)
T ss_pred CCeEEEEEEEcCC--CCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhccc-C
Confidence 3455555555433 4578999886432 234466889999999999999999999876543 57999999975 7
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++........
T Consensus 94 l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~-------~~~~kl~dfg~~~~~~~~~~~ 162 (336)
T cd07849 94 LYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNT-------NCDLKICDFGLARIADPEHDH 162 (336)
T ss_pred HHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECC-------CCCEEECcccceeeccccccc
Confidence 877774 45689999999999999999999999 9999999999999987 789999999998865432221
Q ss_pred c--ccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc-----ccC---cch----HHHH
Q 039817 601 T--STMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL-----ANG---MIL----TDWV 665 (725)
Q Consensus 601 ~--~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~-----~~~---~~~----~~~~ 665 (725)
. .....++..|+|||.+.+ ..++.++||||||++++||++|+.|+.......... ... ... ....
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (336)
T cd07849 163 TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRA 242 (336)
T ss_pred cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhh
Confidence 1 122457889999998754 568899999999999999999999886432110000 000 000 0000
Q ss_pred HHHHHc----CCCC-----hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hcCCC
Q 039817 666 LYCVRT----GNLG-----ATKFERITMVGLWCICPQPTLRPSMKQVLQM--LEGTS 711 (725)
Q Consensus 666 ~~~~~~----~~~~-----~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~--L~~~~ 711 (725)
...... ...+ ....+.+.+++.+||+.+|++|||+.|++++ ++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 243 RNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred hhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 000000 0000 1234678899999999999999999999998 65544
No 352
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.95 E-value=8.6e-29 Score=258.71 Aligned_cols=237 Identities=24% Similarity=0.349 Sum_probs=179.0
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
.+|++++++.+.. .+..+|+|.+.... ......+.+|+.++.++. |+||+++++++..++..+++|||++. +|.+
T Consensus 15 G~~g~vy~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~ 91 (288)
T cd06616 15 GAFGTVNKMLHKP--SGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDK 91 (288)
T ss_pred CCceEEEEEEECC--CCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-CHHH
Confidence 3445555544433 34678999886432 234567899999999996 99999999999999999999999874 5544
Q ss_pred hh---c--cCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 524 FL---F--RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 524 ~l---~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
+. . ....+++.....++.|++.||+|||+. .+++||||||+||+++. ++.+||+|||+++......
T Consensus 92 l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~-------~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 92 FYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDR-------NGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEcc-------CCcEEEeecchhHHhccCC
Confidence 32 2 235789999999999999999999963 28999999999999987 7789999999997654322
Q ss_pred CccccccccCccccchhcccCC---CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-----
Q 039817 599 TRTSTMIRGTMGYMAPEWLRNA---PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR----- 670 (725)
Q Consensus 599 ~~~~~~~~gt~~y~aPE~~~~~---~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 670 (725)
.. ....++..|+|||.+.+. .++.++||||||+++|||++|+.|+..... ..+.+.....
T Consensus 163 ~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----------~~~~~~~~~~~~~~~ 230 (288)
T cd06616 163 AK--TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----------VFDQLTQVVKGDPPI 230 (288)
T ss_pred cc--ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----------HHHHHhhhcCCCCCc
Confidence 11 223478899999998765 689999999999999999999999864321 0111111110
Q ss_pred -cCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 671 -TGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 671 -~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
........+..+.+++.+|++.+|++|||+++|+++
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011112356789999999999999999999999976
No 353
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=1.4e-27 Score=248.56 Aligned_cols=244 Identities=22% Similarity=0.237 Sum_probs=176.8
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccC-cCCccceeeEEEcC--CceeeeeecccCCChh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQ--NHQLLVYELMKNGTLS 522 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lV~e~~~~gsL~ 522 (725)
.++.++++++..+ +..+|+|.+.... ........+|+..+.++. |+|++++++++.++ +..++|+||++ ++|.
T Consensus 11 ~~~~v~~~~~~~~--~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~ 87 (282)
T cd07831 11 TFSEVLKAQSRKT--GKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLY 87 (282)
T ss_pred ccceEEEEEEcCC--CcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHH
Confidence 3445555554433 4568888876432 223344568999999985 99999999999987 88999999997 4787
Q ss_pred hhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
+++... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++. +.+||+|||+++........
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~--------~~~kl~dfg~~~~~~~~~~~- 155 (282)
T cd07831 88 ELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD--------DILKLADFGSCRGIYSKPPY- 155 (282)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC--------CCeEEEecccccccccCCCc-
Confidence 777654 5789999999999999999999999 9999999999999963 68999999999866433221
Q ss_pred ccccccCccccchhccc-CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc----cCcchHHHHHHHHHcC----
Q 039817 602 STMIRGTMGYMAPEWLR-NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA----NGMILTDWVLYCVRTG---- 672 (725)
Q Consensus 602 ~~~~~gt~~y~aPE~~~-~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---- 672 (725)
....++..|+|||.+. +..++.++||||||+++|||++|..|+......+.... .......+........
T Consensus 156 -~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (282)
T cd07831 156 -TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNY 234 (282)
T ss_pred -CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccc
Confidence 2234788999999764 45678999999999999999999998865322110000 0000000000000000
Q ss_pred CC-----------ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 673 NL-----------GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 673 ~~-----------~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.. ....++.+.+++.+||+.+|++||++++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 235 NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 11346789999999999999999999999875
No 354
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.95 E-value=3.3e-28 Score=255.37 Aligned_cols=236 Identities=24% Similarity=0.357 Sum_probs=178.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc-CccHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT-GDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~-~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.+++++++.+... +..||||.+.... .....++..|+.++.+.+ |+||+++++++..+...++||||+++ +|.+.
T Consensus 27 ~~~~v~~~~~~~~--~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l 103 (296)
T cd06618 27 TCGQVYKMRFKKT--GHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMST-CLDKL 103 (296)
T ss_pred CCeEEEEEEECCC--CeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCc-CHHHH
Confidence 3444555544332 4678999886432 234456778888777775 99999999999999999999999864 67776
Q ss_pred hcc-CCCCCHHHHHHHHHHHHHHhhhhhc-ccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 525 LFR-QEIPTWDKRVEIALGIARGLLYLHE-ECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 525 l~~-~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+.. ...+++..+..++.|++.||+|||+ . +|+||||+|+||+++. ++.+||+|||++.........
T Consensus 104 ~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~-------~~~~kL~dfg~~~~~~~~~~~-- 171 (296)
T cd06618 104 LKRIQGPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDA-------SGNVKLCDFGISGRLVDSKAK-- 171 (296)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcC-------CCCEEECccccchhccCCCcc--
Confidence 654 3578999999999999999999997 5 8999999999999987 789999999998765432221
Q ss_pred cccccCccccchhcccCCC----CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC--CCC-
Q 039817 603 TMIRGTMGYMAPEWLRNAP----VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG--NLG- 675 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~~~----~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~- 675 (725)
....++..|+|||.+.+.. ++.++||||||+++|||++|+.|+....... +......... ..+
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~ 241 (296)
T cd06618 172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF----------EVLTKILQEEPPSLPP 241 (296)
T ss_pred cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH----------HHHHHHhcCCCCCCCC
Confidence 2234778899999987553 7889999999999999999999986432110 1111111111 111
Q ss_pred -hhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 676 -ATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 676 -~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
....+.+.+++.+||+.||++||++.+++++-
T Consensus 242 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 242 NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred CCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 13467899999999999999999999998763
No 355
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.95 E-value=4.7e-28 Score=259.12 Aligned_cols=245 Identities=24% Similarity=0.290 Sum_probs=178.5
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcC--CceeeeeecccCCChh
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQ--NHQLLVYELMKNGTLS 522 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~lV~e~~~~gsL~ 522 (725)
++.++++.+.. .+..+++|++... .......+.+|+.+++++ +|+||+++++++... ...++||||++ ++|.
T Consensus 20 ~~~v~~~~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~ 96 (337)
T cd07852 20 YGIVWKAIDRR--TKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLH 96 (337)
T ss_pred CeeEEEEEEcC--CCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHH
Confidence 34444444332 3467899987532 233445678899999999 999999999998754 36899999998 5999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc--
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR-- 600 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~-- 600 (725)
+++... .+++..+..++.|++.||.|||+. +|+|+||||+||+++. ++.+||+|||++.........
T Consensus 97 ~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~-------~~~~kl~d~g~~~~~~~~~~~~~ 165 (337)
T cd07852 97 AVIRAN-ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNS-------DCRVKLADFGLARSLSELEENPE 165 (337)
T ss_pred HHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcC-------CCcEEEeeccchhcccccccccc
Confidence 988665 788999999999999999999998 9999999999999987 889999999999865433221
Q ss_pred --cccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc----ccCcchHH--------HH
Q 039817 601 --TSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL----ANGMILTD--------WV 665 (725)
Q Consensus 601 --~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~----~~~~~~~~--------~~ 665 (725)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.|+.......... .......+ ..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (337)
T cd07852 166 NPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFA 245 (337)
T ss_pred CcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhH
Confidence 2223458889999998764 467899999999999999999999885432111000 00000000 00
Q ss_pred HHHH---HcC------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 666 LYCV---RTG------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 666 ~~~~---~~~------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.... ... .........+.+++.+|++.+|++|||+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 246 ATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000 000 0011235678999999999999999999999976
No 356
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-28 Score=235.85 Aligned_cols=210 Identities=24% Similarity=0.259 Sum_probs=171.8
Q ss_pred HHHHHHHHHhcc-CcCCccceeeEEEc----CCceeeeeecccCCChhhhhccCC--CCCHHHHHHHHHHHHHHhhhhhc
Q 039817 480 SFLREVQVIGRT-HHKNLVQLLGFCIE----QNHQLLVYELMKNGTLSAFLFRQE--IPTWDKRVEIALGIARGLLYLHE 552 (725)
Q Consensus 480 ~f~~E~~~l~~l-~H~niv~l~g~~~~----~~~~~lV~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qia~gL~yLH~ 552 (725)
..++|+++--+. .|+|||.++++++. ...+++|||+|+||.|...+..++ .++++++..|..||+.|+.|||+
T Consensus 100 KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~ 179 (400)
T KOG0604|consen 100 KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHS 179 (400)
T ss_pred HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh
Confidence 457899877665 69999999999874 346789999999999999998764 58999999999999999999999
Q ss_pred ccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCCCCCCccceehhH
Q 039817 553 ECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632 (725)
Q Consensus 553 ~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G 632 (725)
. +|.||||||+|+|..... .+-.+||+|||+|+.-.... .....+-|+.|.|||++-..+|+...|+||+|
T Consensus 180 ~---nIAHRDlKpENLLyt~t~----~na~lKLtDfGFAK~t~~~~--~L~TPc~TPyYvaPevlg~eKydkscdmwSlg 250 (400)
T KOG0604|consen 180 M---NIAHRDLKPENLLYTTTS----PNAPLKLTDFGFAKETQEPG--DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLG 250 (400)
T ss_pred c---chhhccCChhheeeecCC----CCcceEecccccccccCCCc--cccCCcccccccCHHHhCchhcCCCCCccchh
Confidence 9 999999999999987643 27789999999999755432 23345679999999999999999999999999
Q ss_pred HHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC--Ch----hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 633 VMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL--GA----TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 633 ~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
|++|-|++|.+||..... ..+..-.+..+..+.+ +. ..++...++++.+|..+|.+|.|+.|++.+
T Consensus 251 VimYIlLCGyPPFYS~hg--------~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 251 VIMYILLCGYPPFYSNHG--------LAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred HHHHHhhcCCCcccccCC--------ccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 999999999999975432 1222223333433432 22 456788899999999999999999999976
No 357
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.95 E-value=8.1e-29 Score=257.98 Aligned_cols=246 Identities=22% Similarity=0.252 Sum_probs=183.2
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC--ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG--DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.++.++++.+.. .+..+++|.+..... .....+.+|++++++++|+||+++++++..++..++|+||+++ +|.++
T Consensus 11 ~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~ 87 (283)
T cd05118 11 TYGVVYKARDKL--TGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKL 87 (283)
T ss_pred CCceEEEEEcCC--CCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHH
Confidence 344455555433 345688888764332 2456788999999999999999999999999999999999986 88888
Q ss_pred hccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 525 LFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 525 l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
+... ..+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||.+........ ...
T Consensus 88 l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~-------~~~~~l~df~~~~~~~~~~~-~~~ 156 (283)
T cd05118 88 IKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINT-------EGVLKLADFGLARSFGSPVR-PYT 156 (283)
T ss_pred HHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECC-------CCcEEEeeeeeeEecCCCcc-ccc
Confidence 7664 5789999999999999999999999 9999999999999987 78899999999987654431 112
Q ss_pred ccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc------c-----cCcchHHHHHHH---
Q 039817 604 MIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL------A-----NGMILTDWVLYC--- 668 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~------~-----~~~~~~~~~~~~--- 668 (725)
...++..|+|||.+.+. .++.++||||||+++++|++|+.++.......... . ......+.....
T Consensus 157 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05118 157 HYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS 236 (283)
T ss_pred CccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhh
Confidence 23477889999998776 78999999999999999999998885433211000 0 000000000000
Q ss_pred HHcC------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 669 VRTG------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 669 ~~~~------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.... .......+.+.+++.+||+.||.+||++.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0000 0111346789999999999999999999999875
No 358
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.95 E-value=8.5e-28 Score=256.40 Aligned_cols=252 Identities=25% Similarity=0.286 Sum_probs=189.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCC-----ceeeeeecccCC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN-----HQLLVYELMKNG 519 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lV~e~~~~g 519 (725)
.+++++++.+... +..++||.+.... ....+.+.+|++++++++|+||+++++++...+ ..++||||+++
T Consensus 12 ~~~~v~~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~- 88 (330)
T cd07834 12 AYGVVCSAVDKRT--GRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMET- 88 (330)
T ss_pred CCeEEEEEEeCCC--CcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhh-
Confidence 4455555554332 4578999886543 344567999999999999999999999998775 78999999984
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 520 sL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
+|.+++.+...+++..+..++.|++.||.|||+. +++|+||||+||+++. ++.+||+|||++........
T Consensus 89 ~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~-------~~~~~L~dfg~~~~~~~~~~ 158 (330)
T cd07834 89 DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNS-------NCDLKICDFGLARGVDPDED 158 (330)
T ss_pred hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcC-------CCCEEEcccCceEeeccccc
Confidence 8999998878899999999999999999999999 9999999999999987 78999999999987654331
Q ss_pred --ccccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccc--------------c--ccCcc
Q 039817 600 --RTSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT--------------L--ANGMI 660 (725)
Q Consensus 600 --~~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~--------------~--~~~~~ 660 (725)
.......++..|+|||.+.+. .++.++||||||+++++|++|+.|+......... . .....
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 238 (330)
T cd07834 159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEK 238 (330)
T ss_pred ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccc
Confidence 112223478889999999887 8899999999999999999999998644321100 0 00000
Q ss_pred hHHHHHHHHHcCC-----CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hcCCC
Q 039817 661 LTDWVLYCVRTGN-----LGATKFERITMVGLWCICPQPTLRPSMKQVLQM--LEGTS 711 (725)
Q Consensus 661 ~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~--L~~~~ 711 (725)
..+++........ ........+.+++.+||+.+|.+||++++++++ +++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 239 ARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred hhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 1111111000000 011245678999999999999999999999986 55543
No 359
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.95 E-value=1.1e-27 Score=250.10 Aligned_cols=245 Identities=24% Similarity=0.287 Sum_probs=178.0
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhcc---CcCCccceeeEEEcCCc-----eeeeeecc
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRT---HHKNLVQLLGFCIEQNH-----QLLVYELM 516 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~~~~-----~~lV~e~~ 516 (725)
.++.++.+.+.. .+..+++|.+.... ......+.+|+.+++++ +|+|++++++++...+. .+++|||+
T Consensus 11 ~~~~v~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~ 88 (287)
T cd07838 11 AYGTVYKARDLN--TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHV 88 (287)
T ss_pred CceEEEEEEECC--CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhc
Confidence 344555555543 34578888875322 22234677888877665 59999999999998776 89999999
Q ss_pred cCCChhhhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcccc
Q 039817 517 KNGTLSAFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL 594 (725)
Q Consensus 517 ~~gsL~~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~ 594 (725)
++ +|.+++... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||++...
T Consensus 89 ~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~-------~~~~~l~dfg~~~~~ 157 (287)
T cd07838 89 DQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTS-------DGQVKIADFGLARIY 157 (287)
T ss_pred cc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEcc-------CCCEEEeccCcceec
Confidence 75 898888664 3589999999999999999999999 9999999999999987 789999999999876
Q ss_pred CcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc--c---cCcchHHHH----
Q 039817 595 KKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL--A---NGMILTDWV---- 665 (725)
Q Consensus 595 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~--~---~~~~~~~~~---- 665 (725)
...... ....++..|+|||.+.+..++.++||||||++++||++|..++......+... . .......+.
T Consensus 158 ~~~~~~--~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 158 SFEMAL--TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred cCCccc--ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence 443221 12336788999999999999999999999999999999988876432211000 0 000000000
Q ss_pred --HHHHHc------CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 666 --LYCVRT------GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 666 --~~~~~~------~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
...... ........+.+.+++.+||+.||.+||++.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 236 LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 000000 00011335678899999999999999999999864
No 360
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.95 E-value=8e-28 Score=269.61 Aligned_cols=219 Identities=18% Similarity=0.260 Sum_probs=162.6
Q ss_pred cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC-----CCCCHHHHHHHHHHHHHHhhhhh
Q 039817 477 GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-----EIPTWDKRVEIALGIARGLLYLH 551 (725)
Q Consensus 477 ~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-----~~l~~~~~~~i~~qia~gL~yLH 551 (725)
....+.+|++++++++|+|||++++++...+..++|+|++.. +|.+++... ..........|+.|++.||.|||
T Consensus 206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH 284 (501)
T PHA03210 206 AAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH 284 (501)
T ss_pred HHHHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999864 676666432 22345677889999999999999
Q ss_pred cccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCCCCCCccceehh
Q 039817 552 EECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631 (725)
Q Consensus 552 ~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~ 631 (725)
+. +|+||||||+|||++. ++.+||+|||+++.+............|+..|+|||.+.+..++.++|||||
T Consensus 285 ~~---gIiHrDLKP~NILl~~-------~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 354 (501)
T PHA03210 285 DK---KLIHRDIKLENIFLNC-------DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSC 354 (501)
T ss_pred hC---CeecCCCCHHHEEECC-------CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHH
Confidence 99 9999999999999987 7889999999998765443333334568999999999999999999999999
Q ss_pred HHHHHHHHhCCcCCCCCCCCccccc-------------cCcchHHHHHHHHHcCCC---Ch---------hHHHHHHHHH
Q 039817 632 GVMLLEIIFCKRHTELHRVDEPTLA-------------NGMILTDWVLYCVRTGNL---GA---------TKFERITMVG 686 (725)
Q Consensus 632 G~vl~elltg~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~---~~---------~~~~~l~~l~ 686 (725)
|+++|||++|..++........... .-......+...+....+ +. .....+.+++
T Consensus 355 Gvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li 434 (501)
T PHA03210 355 GLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPL 434 (501)
T ss_pred HHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHH
Confidence 9999999998865432211110000 000000001111100000 00 1234567789
Q ss_pred HHccCCCCCCCCCHHHHHHH
Q 039817 687 LWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 687 ~~cl~~dp~~RPs~~evl~~ 706 (725)
.+||+.||++|||+.|++++
T Consensus 435 ~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 435 VKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHhccCcccCcCHHHHhhC
Confidence 99999999999999999975
No 361
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=7.5e-28 Score=243.89 Aligned_cols=222 Identities=29% Similarity=0.329 Sum_probs=183.8
Q ss_pred cceEEEEEEcccccCcc-HHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHH
Q 039817 461 QEVEVAVKQLEKVTGDG-EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEI 539 (725)
Q Consensus 461 ~~~~vavk~l~~~~~~~-~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i 539 (725)
.+..+++|.+....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++.....+++..+..+
T Consensus 13 ~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~ 92 (244)
T smart00220 13 TGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFY 92 (244)
T ss_pred CCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHH
Confidence 34678999987654444 78899999999999999999999999999999999999999999999987766899999999
Q ss_pred HHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccC
Q 039817 540 ALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRN 619 (725)
Q Consensus 540 ~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 619 (725)
+.+++.++.|||+. +++|+||+|+||+++. ++.++|+|||.+....... ......++..|++||.+.+
T Consensus 93 ~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~-------~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~ 160 (244)
T smart00220 93 ARQILSALEYLHSN---GIIHRDLKPENILLDE-------DGHVKLADFGLARQLDPGG--LLTTFVGTPEYMAPEVLLG 160 (244)
T ss_pred HHHHHHHHHHHHHc---CeecCCcCHHHeEECC-------CCcEEEccccceeeecccc--ccccccCCcCCCCHHHHcc
Confidence 99999999999999 9999999999999987 7899999999998765432 2223447889999999988
Q ss_pred CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCCh--h---HHHHHHHHHHHccCCCC
Q 039817 620 APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGA--T---KFERITMVGLWCICPQP 694 (725)
Q Consensus 620 ~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~l~~l~~~cl~~dp 694 (725)
..++.++||||||+++++|++|..|+..... . .............. . ....+.+++.+|+..+|
T Consensus 161 ~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 229 (244)
T smart00220 161 KGYGKAVDVWSLGVILYELLTGKPPFPGDDQ-------L----LELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDP 229 (244)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-------H----HHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCc
Confidence 8899999999999999999999988864211 1 11111111121111 1 56789999999999999
Q ss_pred CCCCCHHHHHH
Q 039817 695 TLRPSMKQVLQ 705 (725)
Q Consensus 695 ~~RPs~~evl~ 705 (725)
++||++.++++
T Consensus 230 ~~Rp~~~~~~~ 240 (244)
T smart00220 230 EKRLTAEEALQ 240 (244)
T ss_pred hhccCHHHHhh
Confidence 99999999987
No 362
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.95 E-value=8.6e-28 Score=250.11 Aligned_cols=246 Identities=24% Similarity=0.268 Sum_probs=183.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.++.++.++...+ +..+++|.+.... ....+.+..|++++++++|+||+++++++...+..++||||++ ++|.++
T Consensus 11 ~~~~vy~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~ 87 (282)
T cd07829 11 TYGVVYKARDKKT--GEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKY 87 (282)
T ss_pred CcceEEEeeecCC--CcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHH
Confidence 3455555555443 4578888876542 3345678899999999999999999999999999999999998 589999
Q ss_pred hccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 525 LFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 525 l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
+.+. ..+++..+..++.|++.||.|||+. +++|+||+|+||+++. ++.+||+|||+++........ ..
T Consensus 88 i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~-------~~~~~l~d~g~~~~~~~~~~~-~~ 156 (282)
T cd07829 88 LDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINR-------DGVLKLADFGLARAFGIPLRT-YT 156 (282)
T ss_pred HHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcC-------CCCEEEecCCcccccCCCccc-cC
Confidence 9876 5789999999999999999999999 9999999999999987 789999999999876443221 11
Q ss_pred ccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc-----ccCcchHHHH--------HHHH
Q 039817 604 MIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL-----ANGMILTDWV--------LYCV 669 (725)
Q Consensus 604 ~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~-----~~~~~~~~~~--------~~~~ 669 (725)
...++..|+|||.+.+. .++.++||||||++++||++|+.++.......... ........|. ....
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07829 157 HEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTF 236 (282)
T ss_pred ccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccc
Confidence 22356789999998766 88999999999999999999988885432111000 0000000000 0000
Q ss_pred H---cC---CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 670 R---TG---NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 670 ~---~~---~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
. .. .........+.+++..||+.+|++||++++++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 237 PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0 00 0001225679999999999999999999999864
No 363
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.95 E-value=3.7e-29 Score=237.87 Aligned_cols=238 Identities=22% Similarity=0.274 Sum_probs=186.2
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccC-ccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
....|+.+.+.+..-+ ++.+|||+++.... ...++++.|.++..+- +.||||+++|.+-.++..++.||.|.- ||
T Consensus 73 G~G~fG~V~KM~hk~s--g~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-Sl 149 (361)
T KOG1006|consen 73 GNGAFGTVNKMLHKPS--GKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-SL 149 (361)
T ss_pred cCCcchhhhhhhcCcc--CcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-hH
Confidence 4456777777665544 46889999976543 5667899999977665 799999999999999999999999974 77
Q ss_pred hhhhc-----cCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 522 SAFLF-----RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 522 ~~~l~-----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
+.+.. ++..+++...-+|..-.+.||.||.+. ..|||||+||+||||+. .|.+||+|||++-.+..
T Consensus 150 DklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr-------~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 150 DKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDR-------HGDVKLCDFGICGQLVD 220 (361)
T ss_pred HHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEec-------CCCEeeecccchHhHHH
Confidence 76653 346789999999999999999999876 58999999999999988 89999999999876543
Q ss_pred CCCccccccccCccccchhcccCC--CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCC
Q 039817 597 DQTRTSTMIRGTMGYMAPEWLRNA--PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNL 674 (725)
Q Consensus 597 ~~~~~~~~~~gt~~y~aPE~~~~~--~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (725)
.. ..+.-.|-..|||||.+... .|+.+|||||||+.|+|+.||+.|+..... ..+++.+.. .+..
T Consensus 221 Si--AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s----------vfeql~~Vv-~gdp 287 (361)
T KOG1006|consen 221 SI--AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS----------VFEQLCQVV-IGDP 287 (361)
T ss_pred HH--HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH----------HHHHHHHHH-cCCC
Confidence 22 22334577889999999643 589999999999999999999999864321 223333322 2222
Q ss_pred Ch--------hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 675 GA--------TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 675 ~~--------~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+. +....+++++..|+.+|..+||+..++.++
T Consensus 288 p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 288 PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 21 356789999999999999999999988754
No 364
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.95 E-value=4.1e-28 Score=249.52 Aligned_cols=207 Identities=26% Similarity=0.378 Sum_probs=168.4
Q ss_pred cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhcc----CCCCCHHHHHHHHHHHHHHhhhhhc
Q 039817 477 GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFR----QEIPTWDKRVEIALGIARGLLYLHE 552 (725)
Q Consensus 477 ~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~qia~gL~yLH~ 552 (725)
...++..|+.++++++||||+++++++.+....++||||+++++|.+++.. ...+++..+..++.|+++||.|||+
T Consensus 45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~ 124 (260)
T cd08222 45 ETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ 124 (260)
T ss_pred hHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 344677899999999999999999999999999999999999999998853 3568999999999999999999999
Q ss_pred ccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCCCCCCccceehhH
Q 039817 553 ECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFG 632 (725)
Q Consensus 553 ~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G 632 (725)
. +++|+||+|+||+++. +.+||+|||+++........ .....++..|+|||.+.+..++.++|+||||
T Consensus 125 ~---~i~h~~l~~~nili~~--------~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG 192 (260)
T cd08222 125 R---RILHRDLKAKNIFLKN--------NLLKIGDFGVSRLLMGSCDL-ATTFTGTPYYMSPEALKHQGYDSKSDIWSLG 192 (260)
T ss_pred c---CccccCCChhheEeec--------CCEeecccCceeecCCCccc-ccCCCCCcCccCHHHHccCCCCchhhHHHHH
Confidence 8 9999999999999964 45999999998765433221 1224478899999999888889999999999
Q ss_pred HHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 633 VMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 633 ~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+++++|++|..++..... ......... ....+......+.+++.+|++.+|++||++.|++++
T Consensus 193 ~~~~~l~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 193 CILYEMCCLAHAFEGQNF-----------LSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HHHHHHHhCCCCCCCccH-----------HHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 999999999998853211 111111111 112334566789999999999999999999999875
No 365
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.95 E-value=1.3e-27 Score=255.25 Aligned_cols=249 Identities=25% Similarity=0.262 Sum_probs=179.8
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhcc-CcCCccceeeEEEcC----CceeeeeecccCC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQ----NHQLLVYELMKNG 519 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~----~~~~lV~e~~~~g 519 (725)
.++.++.+.+.....+..+|+|.+.... ....+.+.+|+++++++ +|+||+++++.+... ...++++||++ +
T Consensus 12 ~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~ 90 (332)
T cd07857 12 AYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-A 90 (332)
T ss_pred CCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-C
Confidence 4455555555444335679999876422 22356788999999999 599999999976533 45788899887 5
Q ss_pred ChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 520 TLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 520 sL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
+|.+++.....+++..+..++.|++.||.|||+. +++||||||+||+++. ++.+||+|||+++.......
T Consensus 91 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~-------~~~~kl~Dfg~a~~~~~~~~ 160 (332)
T cd07857 91 DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNA-------DCELKICDFGLARGFSENPG 160 (332)
T ss_pred CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcC-------CCCEEeCcCCCceecccccc
Confidence 8999998888899999999999999999999999 9999999999999987 78899999999986543221
Q ss_pred c---cccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc--------ccCcchHH----
Q 039817 600 R---TSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL--------ANGMILTD---- 663 (725)
Q Consensus 600 ~---~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~--------~~~~~~~~---- 663 (725)
. ......|+..|+|||.+.+ ..++.++||||||+++++|++|+.|+.......... ........
T Consensus 161 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (332)
T cd07857 161 ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSP 240 (332)
T ss_pred cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhh
Confidence 1 1122458889999998765 468999999999999999999998886432110000 00000000
Q ss_pred ----HHHHHHHcCC-----CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 664 ----WVLYCVRTGN-----LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 664 ----~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.......... ........+.+++.+|++.||++|||+.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 241 KAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 001234678999999999999999999999854
No 366
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.95 E-value=3.2e-27 Score=246.05 Aligned_cols=245 Identities=24% Similarity=0.270 Sum_probs=180.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccC-ccHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTG-DGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
.++++++|+.... +..|+||++..... .......+|+..+++++ |+||+++++++..++..++||||+ +++|.++
T Consensus 11 ~~g~v~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~ 87 (283)
T cd07830 11 TFGSVYLARNKET--GELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQL 87 (283)
T ss_pred CceEEEEEEECCC--CcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHH
Confidence 3445555554332 45789998764322 23334567999999998 999999999999999999999999 7899998
Q ss_pred hccCC--CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 525 LFRQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 525 l~~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+.... .+++..+..++.|++++|.|||+. +++|+||+|+||+++. ++.+||+|||++.........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~-------~~~~~l~d~~~~~~~~~~~~~-- 155 (283)
T cd07830 88 MKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSG-------PEVVKIADFGLAREIRSRPPY-- 155 (283)
T ss_pred HHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcC-------CCCEEEeecccceeccCCCCc--
Confidence 87764 789999999999999999999998 9999999999999987 889999999999865432221
Q ss_pred cccccCccccchhccc-CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc-----ccCcchHHHHHHHHHc-----
Q 039817 603 TMIRGTMGYMAPEWLR-NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL-----ANGMILTDWVLYCVRT----- 671 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~-~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----- 671 (725)
....++..|+|||.+. ...++.++|+||||++++||++|+.++.......... ........|.......
T Consensus 156 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd07830 156 TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGF 235 (283)
T ss_pred CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccc
Confidence 2234788899999875 4567899999999999999999998885443211000 0000000000000000
Q ss_pred ----------CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 672 ----------GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 672 ----------~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..........+.+++.+|++.+|++|||++|++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 236 RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00001124679999999999999999999999865
No 367
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.95 E-value=1.1e-27 Score=253.17 Aligned_cols=248 Identities=25% Similarity=0.284 Sum_probs=175.2
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcCC--------ceeeeeec
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN--------HQLLVYEL 515 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--------~~~lV~e~ 515 (725)
..++.++.+++.-++ ..++||.+.... ......+.+|++++++++|+||+++++++.... ..++|+||
T Consensus 19 g~~~~v~~~~~~~~~--~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~ 96 (311)
T cd07866 19 GTFGEVYKARQIKTG--RVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPY 96 (311)
T ss_pred CCCEEEEEEEECCCC--cEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEec
Confidence 345566666654443 467888775332 222356789999999999999999999875433 46999999
Q ss_pred ccCCChhhhhcc-CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcccc
Q 039817 516 MKNGTLSAFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL 594 (725)
Q Consensus 516 ~~~gsL~~~l~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~ 594 (725)
++. +|...+.. ...+++..+..++.|+++||.|||+. +++|+||||+||+++. ++.+||+|||+++..
T Consensus 97 ~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~-------~~~~~l~dfg~~~~~ 165 (311)
T cd07866 97 MDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDN-------QGILKIADFGLARPY 165 (311)
T ss_pred CCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC-------CCCEEECcCccchhc
Confidence 986 66666654 35789999999999999999999999 9999999999999987 789999999999865
Q ss_pred CcCCCcc----------ccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc-----cc-
Q 039817 595 KKDQTRT----------STMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL-----AN- 657 (725)
Q Consensus 595 ~~~~~~~----------~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~-----~~- 657 (725)
....... .....++..|+|||.+.+ ..++.++||||||++++||++|+.++.......... ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~ 245 (311)
T cd07866 166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGT 245 (311)
T ss_pred cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 4322111 112346788999998765 458899999999999999999999886432210000 00
Q ss_pred --CcchHHHH--HHH---HHcCCCC-------hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 658 --GMILTDWV--LYC---VRTGNLG-------ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 658 --~~~~~~~~--~~~---~~~~~~~-------~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
......+. ... ......+ ....+.+.+++.+|++.+|++|||+.|++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 246 PTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred CChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00000000 000 0000000 1123578899999999999999999999864
No 368
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.95 E-value=1.1e-27 Score=256.60 Aligned_cols=249 Identities=22% Similarity=0.255 Sum_probs=179.0
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCC------ceeeeeeccc
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELMK 517 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~lV~e~~~ 517 (725)
..++.+++|.+.. .+..||||.+... .......+.+|++++++++|+||+++++++.... ..++|+||+.
T Consensus 26 g~~g~v~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~ 103 (342)
T cd07879 26 GAYGSVCSAIDKR--TGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ 103 (342)
T ss_pred cCCeEEEEEEeCC--CCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccc
Confidence 3445555555433 3457888887542 2223456889999999999999999999987543 4689999997
Q ss_pred CCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcC
Q 039817 518 NGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKD 597 (725)
Q Consensus 518 ~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~ 597 (725)
. +|..++ ...+++..+..++.|++.||+|||+. +++||||||+||+++. ++.+||+|||+++.....
T Consensus 104 ~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~-------~~~~kL~dfg~~~~~~~~ 170 (342)
T cd07879 104 T-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNE-------DCELKILDFGLARHADAE 170 (342)
T ss_pred c-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC-------CCCEEEeeCCCCcCCCCC
Confidence 5 777665 24688999999999999999999999 9999999999999987 789999999998764322
Q ss_pred CCccccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc----cCcchHHHH-------
Q 039817 598 QTRTSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA----NGMILTDWV------- 665 (725)
Q Consensus 598 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~----~~~~~~~~~------- 665 (725)
. ....++..|+|||.+.+ ..++.++||||||++++||++|+.||........... .......+.
T Consensus 171 ~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T cd07879 171 M----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKA 246 (342)
T ss_pred C----CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccc
Confidence 1 22346788999999876 4688999999999999999999999874321100000 000000000
Q ss_pred -HHHHHc-CCCC--------hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hcCCCCC
Q 039817 666 -LYCVRT-GNLG--------ATKFERITMVGLWCICPQPTLRPSMKQVLQM--LEGTSEV 713 (725)
Q Consensus 666 -~~~~~~-~~~~--------~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~--L~~~~~~ 713 (725)
...... ...+ ......+.+++.+||+.||++||++++++.+ ++...+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 000000 0000 1234568899999999999999999999976 7766543
No 369
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=4.1e-28 Score=272.78 Aligned_cols=174 Identities=29% Similarity=0.490 Sum_probs=132.6
Q ss_pred eeeeeecccCCChhhhhccCCCC-CHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEee
Q 039817 509 QLLVYELMKNGTLSAFLFRQEIP-TWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIAD 587 (725)
Q Consensus 509 ~~lV~e~~~~gsL~~~l~~~~~l-~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~D 587 (725)
+||-||||+..+|.+++.++... .-...++++.+|++||.|+|+. +||||||||.||+||+ ...|||+|
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~---giIHRDLKP~NIFLd~-------~~~VKIGD 740 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ---GIIHRDLKPRNIFLDS-------RNSVKIGD 740 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC---ceeeccCCcceeEEcC-------CCCeeecc
Confidence 36778888887777777665544 4578899999999999999999 9999999999999987 88999999
Q ss_pred ccCccccC-----------------cCCCccccccccCccccchhcccCC---CCCCccceehhHHHHHHHHhCCcCCCC
Q 039817 588 FGLAKLLK-----------------KDQTRTSTMIRGTMGYMAPEWLRNA---PVTAKVDVYSFGVMLLEIIFCKRHTEL 647 (725)
Q Consensus 588 fgla~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~ksDv~S~G~vl~elltg~~~~~~ 647 (725)
||+|.... .......+...||.-|+|||.+.+. .|+.|+|+||+|||++||+. ||..
T Consensus 741 FGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T 817 (1351)
T KOG1035|consen 741 FGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGT 817 (1351)
T ss_pred cccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCc
Confidence 99998621 0111123446799999999998755 59999999999999999982 3432
Q ss_pred CCCCccccccCcchHHHHHHHHHcCCCCh------hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 648 HRVDEPTLANGMILTDWVLYCVRTGNLGA------TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
. +. ...+...++.+.+|. +..+.-.+++.|++++||.+|||+.|+++.
T Consensus 818 s----------ME-Ra~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 818 S----------ME-RASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred h----------HH-HHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence 2 11 111222233454444 355667889999999999999999999864
No 370
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.95 E-value=3.4e-27 Score=252.93 Aligned_cols=247 Identities=22% Similarity=0.238 Sum_probs=177.5
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcC--------------Cceeee
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--------------NHQLLV 512 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------------~~~~lV 512 (725)
+++.++.+.+..+ +..|++|.+........+.+.+|++++++++|+||+++++.+... ...++|
T Consensus 17 ~~g~vy~~~~~~~--~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 94 (342)
T cd07854 17 SNGLVFSAVDSDC--DKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIV 94 (342)
T ss_pred CCEEEEEEEECCC--CcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEE
Confidence 3444555554433 457888888665556677899999999999999999999876543 357899
Q ss_pred eecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcc
Q 039817 513 YELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAK 592 (725)
Q Consensus 513 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~ 592 (725)
|||++ ++|.+++.. ..+++.....++.|++.||.|||+. +++||||||+||+++.+ +..+|++|||+++
T Consensus 95 ~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~------~~~~kl~dfg~~~ 163 (342)
T cd07854 95 QEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTE------DLVLKIGDFGLAR 163 (342)
T ss_pred eeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCC------CceEEECCcccce
Confidence 99998 489888753 4688999999999999999999999 99999999999999752 5679999999997
Q ss_pred ccCcCCCcc--ccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc-----------cC
Q 039817 593 LLKKDQTRT--STMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA-----------NG 658 (725)
Q Consensus 593 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~-----------~~ 658 (725)
......... .....++..|+|||.+.. ..++.++||||||+++|||++|+.||........... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T cd07854 164 IVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDR 243 (342)
T ss_pred ecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence 653221111 122346888999998654 5678899999999999999999999964321110000 00
Q ss_pred cchHHHHHHHHH----cCCC-----ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 659 MILTDWVLYCVR----TGNL-----GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 659 ~~~~~~~~~~~~----~~~~-----~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
............ .... ......++.+++.+|++.||++|||++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 244 NELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 000000000000 0000 11234678899999999999999999999964
No 371
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-27 Score=243.45 Aligned_cols=239 Identities=24% Similarity=0.252 Sum_probs=190.9
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc---cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV---TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..|+|+......-+ +..+|.|.|.+. ..+++...++|-.+|.+++.+.||.+--.++..+.++||+..|.+|+|+
T Consensus 196 GGFGEV~acqvraT--GKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLk 273 (591)
T KOG0986|consen 196 GGFGEVCACQVRAT--GKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLK 273 (591)
T ss_pred ccccceeEEEEecc--hhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCcee
Confidence 34555544333222 234456655432 3456677889999999999999999999999999999999999999999
Q ss_pred hhhccCC--CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 523 AFLFRQE--IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 523 ~~l~~~~--~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
-+|...+ .+++....-++.+|+.||+|||.. .||.||+||+|||||+ .|+++|+|.|||..+.....-
T Consensus 274 fHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd-------~GhvRISDLGLAvei~~g~~~ 343 (591)
T KOG0986|consen 274 FHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDD-------HGHVRISDLGLAVEIPEGKPI 343 (591)
T ss_pred EEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeecc-------CCCeEeeccceEEecCCCCcc
Confidence 9998765 789999999999999999999999 9999999999999988 899999999999987655432
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH--cCCCChhH
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR--TGNLGATK 678 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 678 (725)
....||.+|||||++.++.|+...|.||+||+||||+.|+.||....... -.+.+.+... ...++...
T Consensus 344 --~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv--------k~eEvdrr~~~~~~ey~~kF 413 (591)
T KOG0986|consen 344 --RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV--------KREEVDRRTLEDPEEYSDKF 413 (591)
T ss_pred --ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh--------hHHHHHHHHhcchhhccccc
Confidence 23369999999999999999999999999999999999999997654321 1112222222 23456677
Q ss_pred HHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 039817 679 FERITMVGLWCICPQPTLRP-----SMKQVLQM 706 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RP-----s~~evl~~ 706 (725)
.++...+....|++||.+|. .+++|.+|
T Consensus 414 S~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 414 SEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred CHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 88899999999999999995 45566543
No 372
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.94 E-value=3.9e-27 Score=250.75 Aligned_cols=243 Identities=23% Similarity=0.242 Sum_probs=177.5
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEc-CCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIE-QNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~e~~~~gsL~ 522 (725)
-.++.++++.+..+ +..|++|.+... .....+.+.+|++++++++||||+++++++.. ....++|+||+. ++|.
T Consensus 21 g~~g~v~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~ 97 (328)
T cd07856 21 GAFGLVCSARDQLT--GQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLG-TDLH 97 (328)
T ss_pred cCCeEEEEEEECCC--CCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhc-cCHH
Confidence 34555566655544 456788876432 23345678899999999999999999999875 567899999985 5888
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTS 602 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~ 602 (725)
+++.. ..+++.....++.|+++||.|||+. +++|+||+|+||+++. ++.+||+|||++.......
T Consensus 98 ~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~-------~~~~~l~dfg~~~~~~~~~---- 162 (328)
T cd07856 98 RLLTS-RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINE-------NCDLKICDFGLARIQDPQM---- 162 (328)
T ss_pred HHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECC-------CCCEEeCccccccccCCCc----
Confidence 88754 4578888889999999999999999 9999999999999987 7889999999987543221
Q ss_pred cccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc-------------cccC---cchHHHH
Q 039817 603 TMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT-------------LANG---MILTDWV 665 (725)
Q Consensus 603 ~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~-------------~~~~---~~~~~~~ 665 (725)
....++..|+|||.+.+ ..++.++||||||++++||++|+.|+......... .... ....+..
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (328)
T cd07856 163 TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFV 242 (328)
T ss_pred CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHH
Confidence 12346788999998765 56899999999999999999999988643211000 0000 0000000
Q ss_pred HHHHHcCCCC-----hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 666 LYCVRTGNLG-----ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 666 ~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.........+ ....+.+.+++.+|++.+|++||++++++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 243 QSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000001111 1234689999999999999999999999887
No 373
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.94 E-value=2e-26 Score=247.25 Aligned_cols=243 Identities=24% Similarity=0.260 Sum_probs=175.4
Q ss_pred cHHHHHHHhcccCCcceEEEEEEccccc--CccHHHHHHHHHHHhccCcCCccceeeEEEcC------CceeeeeecccC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKVT--GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ------NHQLLVYELMKN 518 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~lV~e~~~~ 518 (725)
.++.++.+.+.. .+..||+|++.... ....+.+.+|++++++++|+||+++++++... ...+++++++ +
T Consensus 29 ~~g~v~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~ 105 (345)
T cd07877 29 AYGSVCAAFDTK--TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-G 105 (345)
T ss_pred CCeEEEEEEEcC--CCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-c
Confidence 444555554433 34578999886432 22346788999999999999999999988643 3467888887 6
Q ss_pred CChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 519 GTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 519 gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 106 ~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~-------~~~~kl~dfg~~~~~~~~- 173 (345)
T cd07877 106 ADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNE-------DCELKILDFGLARHTDDE- 173 (345)
T ss_pred cCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcC-------CCCEEEeccccccccccc-
Confidence 799887754 4689999999999999999999999 9999999999999987 788999999998864322
Q ss_pred CccccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc----cCcchHHH--------H
Q 039817 599 TRTSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA----NGMILTDW--------V 665 (725)
Q Consensus 599 ~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~----~~~~~~~~--------~ 665 (725)
.....++..|+|||.+.+ ..++.++||||||++++||++|+.|+........... ........ .
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
T cd07877 174 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 250 (345)
T ss_pred ---ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhH
Confidence 122347888999998866 5688999999999999999999998854321110000 00000000 0
Q ss_pred HHHHHc-CCCC--------hhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 666 LYCVRT-GNLG--------ATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 666 ~~~~~~-~~~~--------~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
...... ...+ ......+.+++.+|++.||.+||++.+++++=
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 251 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred HHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 000000 0000 12345788999999999999999999999763
No 374
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.94 E-value=9.4e-27 Score=249.53 Aligned_cols=242 Identities=24% Similarity=0.284 Sum_probs=176.1
Q ss_pred cHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCC------ceeeeeecccC
Q 039817 447 SYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN------HQLLVYELMKN 518 (725)
Q Consensus 447 ~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~lV~e~~~~ 518 (725)
.++.++.+.+..+ +..||||.+... .....+.+.+|++++++++|+||+++++++.... ..++||||+ +
T Consensus 27 ~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~ 103 (343)
T cd07880 27 AYGTVCSALDRRT--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-G 103 (343)
T ss_pred CCeEEEEEEECCC--CcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-C
Confidence 4445555554333 457899987532 2223456889999999999999999999987653 358999999 6
Q ss_pred CChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 519 GTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 519 gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||++.......
T Consensus 104 ~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~-------~~~~kl~dfg~~~~~~~~~ 172 (343)
T cd07880 104 TDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNE-------DCELKILDFGLARQTDSEM 172 (343)
T ss_pred CCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcC-------CCCEEEeecccccccccCc
Confidence 689888754 5689999999999999999999998 9999999999999987 7889999999998654321
Q ss_pred CccccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc---c-cCcchHHHHH-------
Q 039817 599 TRTSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL---A-NGMILTDWVL------- 666 (725)
Q Consensus 599 ~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~---~-~~~~~~~~~~------- 666 (725)
....++..|+|||.+.+ ..++.++|+||||++++++++|+.|+.......... . ......++..
T Consensus 173 ----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07880 173 ----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDA 248 (343)
T ss_pred ----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhH
Confidence 22346888999999876 458899999999999999999999986432110000 0 0000000000
Q ss_pred -HHHHc-C--------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 667 -YCVRT-G--------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 667 -~~~~~-~--------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..... . .........+.+++.+|++.||++|||+.+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 249 KNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0 0111234568899999999999999999999943
No 375
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.94 E-value=2.8e-27 Score=253.70 Aligned_cols=243 Identities=23% Similarity=0.270 Sum_probs=177.5
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccc--cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCc------eeeeeeccc
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKV--TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNH------QLLVYELMK 517 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------~~lV~e~~~ 517 (725)
..++.++.+.+..+ +..|+||.+... .....+.+.+|+.++++++|+||+++++++...+. .++|+||+
T Consensus 26 g~~g~vy~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~- 102 (343)
T cd07851 26 GAYGQVCSAFDTKT--GRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM- 102 (343)
T ss_pred CCceEEEEEEECCC--CcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-
Confidence 34455555554433 457889887542 22234567889999999999999999998876554 89999999
Q ss_pred CCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcC
Q 039817 518 NGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKD 597 (725)
Q Consensus 518 ~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~ 597 (725)
+++|.+++.. ..+++..+..++.|+++||.|||+. +|+|+||||+||+++. ++.+||+|||++......
T Consensus 103 ~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~-------~~~~kL~dfg~~~~~~~~ 171 (343)
T cd07851 103 GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNE-------DCELKILDFGLARHTDDE 171 (343)
T ss_pred CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECC-------CCCEEEcccccccccccc
Confidence 4699988865 4689999999999999999999998 9999999999999987 788999999999865432
Q ss_pred CCccccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc--c--CcchHHH--------
Q 039817 598 QTRTSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA--N--GMILTDW-------- 664 (725)
Q Consensus 598 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~--~--~~~~~~~-------- 664 (725)
.....++..|+|||.+.+ ..++.++||||||++++|+++|+.|+........... . ......+
T Consensus 172 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07851 172 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSES 247 (343)
T ss_pred ----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchh
Confidence 122347788999998865 4678999999999999999999998864322110000 0 0000000
Q ss_pred HHHHHHc---C---C---CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 665 VLYCVRT---G---N---LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 665 ~~~~~~~---~---~---~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
....... . . ......+.+.+++.+|++.+|++|||+.||+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 248 ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0000000 0 0 001235688999999999999999999999875
No 376
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-27 Score=255.21 Aligned_cols=259 Identities=23% Similarity=0.295 Sum_probs=192.6
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccc-cCccHHHHHHHHHHHhccCcCCccceeeEEEcC------Cceeeeeec
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKV-TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ------NHQLLVYEL 515 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~lV~e~ 515 (725)
+....|+.|+++.+..+|+ .||||..... .....+...+|+++|+++.|+|||++.+.=++. ....+||||
T Consensus 21 LG~Ga~g~V~rgrnketG~--~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy 98 (732)
T KOG4250|consen 21 LGKGAFGNVYRGRNKETGR--LVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY 98 (732)
T ss_pred hcCCccceeeeeccccccc--chhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence 3456678888877776664 6788887653 344567789999999999999999999986654 367899999
Q ss_pred ccCCChhhhhccC---CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcc
Q 039817 516 MKNGTLSAFLFRQ---EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAK 592 (725)
Q Consensus 516 ~~~gsL~~~l~~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~ 592 (725)
|.+|||...|.+. ..+++...+.++.+++.||.|||+. +|+||||||.||++-.. .|+...-||+|||.|+
T Consensus 99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~G---edgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIG---EDGQSIYKLTDFGAAR 172 (732)
T ss_pred cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeec---CCCceEEeeecccccc
Confidence 9999999999765 5789999999999999999999999 99999999999998653 2346678999999999
Q ss_pred ccCcCCCccccccccCccccchhccc-CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcccc----------ccCcc-
Q 039817 593 LLKKDQTRTSTMIRGTMGYMAPEWLR-NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTL----------ANGMI- 660 (725)
Q Consensus 593 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~----------~~~~~- 660 (725)
....+. ....+.||..|++||... .+.|+...|.||||+++||.+||..||........-. .....
T Consensus 173 el~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i 250 (732)
T KOG4250|consen 173 ELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI 250 (732)
T ss_pred cCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence 877655 445577999999999998 4889999999999999999999999997544321000 00000
Q ss_pred --------hHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCC--CHHHHHHHhcCCC
Q 039817 661 --------LTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRP--SMKQVLQMLEGTS 711 (725)
Q Consensus 661 --------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP--s~~evl~~L~~~~ 711 (725)
..+|-..+-....+......++.+.+..++..+|++|- ...+....+..++
T Consensus 251 ~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL 311 (732)
T KOG4250|consen 251 GAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDIL 311 (732)
T ss_pred eeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHH
Confidence 00000000000112224556777777788888888887 5555555555443
No 377
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.94 E-value=2.9e-27 Score=236.59 Aligned_cols=236 Identities=22% Similarity=0.282 Sum_probs=181.3
Q ss_pred ceEEEEEEcccccCccHHHHHHHHHHHhccC-c-CC----ccceeeEEEcCCceeeeeecccCCChhhhhccC--CCCCH
Q 039817 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTH-H-KN----LVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ--EIPTW 533 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~-H-~n----iv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~l~~ 533 (725)
+..||||+++... ...+.-+-|++++.++. + |+ +|++.+++...++.++|+|.+. -|+.++|..+ .+++.
T Consensus 114 ~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG-~S~~dFlk~N~y~~fpi 191 (415)
T KOG0671|consen 114 KEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLG-LSTFDFLKENNYIPFPI 191 (415)
T ss_pred CceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccC-hhHHHHhccCCccccch
Confidence 5789999988753 45566788999999993 3 33 7899999999999999999994 4999999876 46788
Q ss_pred HHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCcc-------------ccCCCCceEEeeccCccccCcCCCc
Q 039817 534 DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYI-------------TIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 534 ~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~-------------~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
.++..|+.|+++++++||+. .++|-||||+|||+.++.. -...+..+||+|||.|.......
T Consensus 192 ~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-- 266 (415)
T KOG0671|consen 192 DHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-- 266 (415)
T ss_pred HHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc--
Confidence 99999999999999999999 9999999999999854421 11235678999999998755443
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcc-----cc----ccCcchHHHHHHHHHc
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEP-----TL----ANGMILTDWVLYCVRT 671 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~ 671 (725)
..+..|..|.|||++.+-.++.++||||+||+|.|+.+|...|..+...+. .+ ...+............
T Consensus 267 --s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~ 344 (415)
T KOG0671|consen 267 --STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRR 344 (415)
T ss_pred --ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhc
Confidence 335578999999999999999999999999999999999999987763320 00 0001111101111111
Q ss_pred CCC---------------------------ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 672 GNL---------------------------GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 672 ~~~---------------------------~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
+.+ ...+..+|.+|+..||..||.+|+|+.|++.+
T Consensus 345 ~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 345 GRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred ccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 111 11455679999999999999999999999875
No 378
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.94 E-value=2.5e-26 Score=265.49 Aligned_cols=135 Identities=25% Similarity=0.291 Sum_probs=115.7
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..|+.|+.+.+... +..||||.+.... ......+..|+.+++.++|+||+++++.+...+..+|||||+++++|.
T Consensus 15 G~fg~Vy~a~~~~~--~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~ 92 (669)
T cd05610 15 GAFGKVYLGRKKNN--SKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVK 92 (669)
T ss_pred CCCeEEEEEEECCC--CcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHH
Confidence 34556666655433 4578888876432 223467889999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcc
Q 039817 523 AFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAK 592 (725)
Q Consensus 523 ~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~ 592 (725)
+++...+.+++..+..|+.||+.||.|||.. +|+||||||+||||+. ++.+||+|||+++
T Consensus 93 ~li~~~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~-------~g~vkL~DFGls~ 152 (669)
T cd05610 93 SLLHIYGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISN-------EGHIKLTDFGLSK 152 (669)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcC-------CCCEEEEeCCCCc
Confidence 9998778889999999999999999999998 9999999999999987 7889999999986
No 379
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6e-27 Score=228.29 Aligned_cols=224 Identities=26% Similarity=0.263 Sum_probs=185.9
Q ss_pred cceEEEEEEcccccC---ccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHH
Q 039817 461 QEVEVAVKQLEKVTG---DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV 537 (725)
Q Consensus 461 ~~~~vavk~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~ 537 (725)
.+..+|+|+|++.-- +....-+.|-++|...+||.+..|.-.++..+++|+||||..+|.|.-+|.+.+.+++....
T Consensus 192 t~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtR 271 (516)
T KOG0690|consen 192 TGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTR 271 (516)
T ss_pred cCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhh
Confidence 345788898876432 23344578889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcc
Q 039817 538 EIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL 617 (725)
Q Consensus 538 ~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~ 617 (725)
-+...|+.||.|||++ +||.||||.+|.|||. ++.+||+||||++.--.. ......++||+.|+|||++
T Consensus 272 FYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDk-------DGHIKitDFGLCKE~I~~-g~t~kTFCGTPEYLAPEVl 340 (516)
T KOG0690|consen 272 FYGAEIVSALGYLHSR---NIVYRDLKLENLLLDK-------DGHIKITDFGLCKEEIKY-GDTTKTFCGTPEYLAPEVL 340 (516)
T ss_pred hhhHHHHHHhhhhhhC---Ceeeeechhhhheecc-------CCceEeeecccchhcccc-cceeccccCChhhcCchhh
Confidence 9999999999999999 9999999999999988 899999999999864322 2334558899999999999
Q ss_pred cCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCC
Q 039817 618 RNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLR 697 (725)
Q Consensus 618 ~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~R 697 (725)
....|..+.|.|-+|||+|||++|+.||...+.+. +-+ ......-.+|....++...|+.-.|.+||++|
T Consensus 341 eDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k--------LFe--LIl~ed~kFPr~ls~eAktLLsGLL~kdP~kR 410 (516)
T KOG0690|consen 341 EDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK--------LFE--LILMEDLKFPRTLSPEAKTLLSGLLKKDPKKR 410 (516)
T ss_pred ccccccceeehhhhhHHHHHHHhccCcccccchhH--------HHH--HHHhhhccCCccCCHHHHHHHHHHhhcChHhh
Confidence 99999999999999999999999999997553221 111 12223446677788888999999999999999
Q ss_pred C-----CHHHHHH
Q 039817 698 P-----SMKQVLQ 705 (725)
Q Consensus 698 P-----s~~evl~ 705 (725)
. .+.||.+
T Consensus 411 LGgGpdDakEi~~ 423 (516)
T KOG0690|consen 411 LGGGPDDAKEIMR 423 (516)
T ss_pred cCCCchhHHHHHh
Confidence 5 4555554
No 380
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-27 Score=259.12 Aligned_cols=228 Identities=26% Similarity=0.314 Sum_probs=171.5
Q ss_pred cceEEEEEEcccccCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChhhhhccC-CC---CCHHH
Q 039817 461 QEVEVAVKQLEKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EI---PTWDK 535 (725)
Q Consensus 461 ~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~---l~~~~ 535 (725)
++++||||++-. ...+-..+|+..|..- +|||||++++.-.+....||..|.|.. +|++++... .. ..-..
T Consensus 532 e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~~~d~~~~~~i~ 607 (903)
T KOG1027|consen 532 EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESSGLDVEMQSDID 607 (903)
T ss_pred CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHHHHhccccchhhccccc
Confidence 467999999843 2334457999999887 699999999988889999999999975 999999874 11 11134
Q ss_pred HHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc--ccccccCccccc
Q 039817 536 RVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT--STMIRGTMGYMA 613 (725)
Q Consensus 536 ~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~--~~~~~gt~~y~a 613 (725)
.+.++.|+++||+|||+. +||||||||+||||+... .++..+++|+|||+++....+.... .....||.||+|
T Consensus 608 ~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~--~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~A 682 (903)
T KOG1027|consen 608 PISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPS--ADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQA 682 (903)
T ss_pred HHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccC--CCcceeEEecccccccccCCCcchhhcccCCCCcccccC
Confidence 578899999999999998 999999999999998632 1336789999999999876654432 234569999999
Q ss_pred hhcccCCCCCCccceehhHHHHHHHHhC-CcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCC
Q 039817 614 PEWLRNAPVTAKVDVYSFGVMLLEIIFC-KRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICP 692 (725)
Q Consensus 614 PE~~~~~~~~~ksDv~S~G~vl~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 692 (725)
||.+.+..-+.+.||||+|||+|+.++| ..||......+.-+..... .+ ..+......+..+||.+|+++
T Consensus 683 PE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~------~L---~~L~~~~d~eA~dLI~~ml~~ 753 (903)
T KOG1027|consen 683 PEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNY------TL---VHLEPLPDCEAKDLISRMLNP 753 (903)
T ss_pred HHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCcc------ce---eeeccCchHHHHHHHHHhcCC
Confidence 9999998888899999999999999998 5666543221100000000 00 001111112788999999999
Q ss_pred CCCCCCCHHHHHHH
Q 039817 693 QPTLRPSMKQVLQM 706 (725)
Q Consensus 693 dp~~RPs~~evl~~ 706 (725)
+|..||++.+|+.|
T Consensus 754 dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 754 DPQLRPSATDVLNH 767 (903)
T ss_pred CcccCCCHHHHhCC
Confidence 99999999999854
No 381
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-26 Score=227.21 Aligned_cols=230 Identities=25% Similarity=0.281 Sum_probs=173.9
Q ss_pred ceEEEEEEccc--ccCccHHHHHHHHHHHhccCcCCccceeeEEEcC------CceeeeeecccCCChhhhhccCCCCCH
Q 039817 462 EVEVAVKQLEK--VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ------NHQLLVYELMKNGTLSAFLFRQEIPTW 533 (725)
Q Consensus 462 ~~~vavk~l~~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~~~lV~e~~~~gsL~~~l~~~~~l~~ 533 (725)
...||+|++.. ......+...+|..++..+.|+||++++.++.-. ...|+|||+|.. +|...+. ..++.
T Consensus 41 ~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~--~elDH 117 (369)
T KOG0665|consen 41 GRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDA-NLCQVIL--MELDH 117 (369)
T ss_pred cCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhh-HHHHHHH--Hhcch
Confidence 35678887643 2234456678999999999999999999998743 367999999975 8888876 45677
Q ss_pred HHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccc
Q 039817 534 DKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMA 613 (725)
Q Consensus 534 ~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~a 613 (725)
.....|+.|++.|++|||+. +|+||||||+||++.. +..+||.|||+++....+ ...+....+..|.|
T Consensus 118 ~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~-------~~~lKi~dfg~ar~e~~~--~~mtpyVvtRyyra 185 (369)
T KOG0665|consen 118 ETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNS-------DCTLKILDFGLARTEDTD--FMMTPYVVTRYYRA 185 (369)
T ss_pred HHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecc-------hhheeeccchhhcccCcc--cccCchhheeeccC
Confidence 88999999999999999999 9999999999999987 789999999999975544 34555668899999
Q ss_pred hhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCcc-c-----ccc-Ccc----hHHHHHHHHHc----------C
Q 039817 614 PEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEP-T-----LAN-GMI----LTDWVLYCVRT----------G 672 (725)
Q Consensus 614 PE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~-~-----~~~-~~~----~~~~~~~~~~~----------~ 672 (725)
||.+.+..+.+.+||||.||++.||++|+..|.+...-++ . +.. ... +..-++...+. .
T Consensus 186 pevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~ 265 (369)
T KOG0665|consen 186 PEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSE 265 (369)
T ss_pred chheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhh
Confidence 9999999999999999999999999999988764322110 0 000 000 00000000000 0
Q ss_pred CCC-----------hhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 673 NLG-----------ATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 673 ~~~-----------~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.++ ......+++++.+||-.+|++|.+++++++|
T Consensus 266 ~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 266 LFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000 1234468889999999999999999999987
No 382
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.93 E-value=4e-27 Score=242.35 Aligned_cols=228 Identities=24% Similarity=0.288 Sum_probs=181.4
Q ss_pred ceEEEEEEccc--ccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC-CCCCHHHHHH
Q 039817 462 EVEVAVKQLEK--VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVE 538 (725)
Q Consensus 462 ~~~vavk~l~~--~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~ 538 (725)
++.||||.+.+ .....+.++++|+.+|.+++||.||.+--.|+..+..++|||-+.+.=|+-.|... +++++..-.-
T Consensus 589 GrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkF 668 (888)
T KOG4236|consen 589 GRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKF 668 (888)
T ss_pred CceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHH
Confidence 45778888764 34566788999999999999999999999999999999999999876666666443 6788888888
Q ss_pred HHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhccc
Q 039817 539 IALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLR 618 (725)
Q Consensus 539 i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 618 (725)
++.||+.||.|||.+ +|+|+||||+||||... +.-..+||+|||.|+++++...+ ....||+.|+|||+++
T Consensus 669 lvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~----~~FPQvKlCDFGfARiIgEksFR--rsVVGTPAYLaPEVLr 739 (888)
T KOG4236|consen 669 LVTQILVALRYLHFK---NIVHCDLKPENVLLASA----SPFPQVKLCDFGFARIIGEKSFR--RSVVGTPAYLAPEVLR 739 (888)
T ss_pred HHHHHHHHHHHhhhc---ceeeccCCchheeeccC----CCCCceeeccccceeecchhhhh--hhhcCCccccCHHHHh
Confidence 999999999999999 99999999999999874 33668999999999998765443 3356999999999999
Q ss_pred CCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCC
Q 039817 619 NAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRP 698 (725)
Q Consensus 619 ~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP 698 (725)
++.|+..-|+||.||++|--++|..||.....-. ++..-..++. ....=.+..+..++||...||..-.+|-
T Consensus 740 nkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn----dQIQNAaFMy----Pp~PW~eis~~AidlIn~LLqVkm~kRy 811 (888)
T KOG4236|consen 740 NKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN----DQIQNAAFMY----PPNPWSEISPEAIDLINNLLQVKMRKRY 811 (888)
T ss_pred hccccccccceeeeEEEEEEecccccCCCccchh----HHhhcccccc----CCCchhhcCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999997432211 1111011100 0011125567788899999999999998
Q ss_pred CHHHHHHH
Q 039817 699 SMKQVLQM 706 (725)
Q Consensus 699 s~~evl~~ 706 (725)
|.++-+.+
T Consensus 812 svdk~lsh 819 (888)
T KOG4236|consen 812 SVDKSLSH 819 (888)
T ss_pred chHhhccc
Confidence 88776543
No 383
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=2.6e-26 Score=250.76 Aligned_cols=238 Identities=24% Similarity=0.297 Sum_probs=189.0
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhcc-CcCCccceeeEEE-----cCCceeeeeeccc
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCI-----EQNHQLLVYELMK 517 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~-----~~~~~~lV~e~~~ 517 (725)
...+|+.++++++.-.++..+++|+.. .....+++..|.++++.. +|||++.++|++. .+++++||||||.
T Consensus 28 g~Gtygkv~k~k~~~~~~~aa~kI~~~---~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~ 104 (953)
T KOG0587|consen 28 GNGTYGKVYKGRHVKTGQLAAIKIMDP---TEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCG 104 (953)
T ss_pred eeccceeEEEEeeeecCceeeeEeecC---CccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccC
Confidence 345677777777777777766666655 345567788999999987 7999999999987 3578999999999
Q ss_pred CCChhhhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccC
Q 039817 518 NGTLSAFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLK 595 (725)
Q Consensus 518 ~gsL~~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~ 595 (725)
+||..|.+... ..+.|..+.-|+..+++||.|||.. .++|||||-.|||++. ++.+|+.|||++....
T Consensus 105 gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~-------e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 105 GGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTE-------NAEVKLVDFGVSAQLD 174 (953)
T ss_pred CccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEec-------cCcEEEeeeeeeeeee
Confidence 99999998654 6789999999999999999999999 9999999999999988 8999999999988655
Q ss_pred cCCCccccccccCccccchhcccCC-----CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH
Q 039817 596 KDQTRTSTMIRGTMGYMAPEWLRNA-----PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR 670 (725)
Q Consensus 596 ~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 670 (725)
....+..+ ..||+.|||||++... .|+.++|+||||++..||--|.+|.-.... ...+....+
T Consensus 175 sT~grRnT-~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP-----------mraLF~IpR 242 (953)
T KOG0587|consen 175 STVGRRNT-FIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP-----------MRALFLIPR 242 (953)
T ss_pred cccccccC-cCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch-----------hhhhccCCC
Confidence 43333333 4599999999998643 578899999999999999999888753221 111111111
Q ss_pred cCC----CChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 671 TGN----LGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 671 ~~~----~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
... -+....+++.++|..|+.+|..+||++.++++|
T Consensus 243 NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 243 NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 111 123567889999999999999999999998876
No 384
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=7.2e-27 Score=220.49 Aligned_cols=251 Identities=22% Similarity=0.277 Sum_probs=185.2
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcC--------Cceeeeeec
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQ--------NHQLLVYEL 515 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--------~~~~lV~e~ 515 (725)
...+|+|+++|...-.++.++++.+.++.....-...-++|+++|..++|+|++.++..|... ..++|||++
T Consensus 26 gqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ 105 (376)
T KOG0669|consen 26 GQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDF 105 (376)
T ss_pred CCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHH
Confidence 456899999999888777644444444444333345568999999999999999999998642 357999999
Q ss_pred ccCCChhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcccc
Q 039817 516 MKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL 594 (725)
Q Consensus 516 ~~~gsL~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~ 594 (725)
++. +|.-.|... ..++..++.++..++..||.|+|.. .|+|||+|+.|+|++. ++.+||+|||+++.+
T Consensus 106 ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~-------dgilklADFGlar~f 174 (376)
T KOG0669|consen 106 CEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITK-------DGILKLADFGLARAF 174 (376)
T ss_pred hhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcC-------CceEEeeccccccce
Confidence 987 787777665 6789999999999999999999999 9999999999999987 899999999999866
Q ss_pred CcCCCc---cccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc--------------cc
Q 039817 595 KKDQTR---TSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT--------------LA 656 (725)
Q Consensus 595 ~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~--------------~~ 656 (725)
...... .-+...-|..|++||.+.+ ..+.++.|||.-||++.||.++.+.+......... ..
T Consensus 175 s~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP 254 (376)
T KOG0669|consen 175 STSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWP 254 (376)
T ss_pred ecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCC
Confidence 432221 1223446889999999876 47899999999999999999999877643321100 00
Q ss_pred cCcchHHHHHHHHHcCCCCh-------------hHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 657 NGMILTDWVLYCVRTGNLGA-------------TKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
+-..+ .+.+.+...+++. ...+...+|+..++..||.+||++++++.+-
T Consensus 255 ~~d~l--pL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 255 NVDNL--PLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred Ccccc--hHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 00000 0111111111211 1123567889999999999999999998764
No 385
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.92 E-value=9.2e-26 Score=207.32 Aligned_cols=190 Identities=27% Similarity=0.413 Sum_probs=154.3
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccc-ccCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEK-VTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~-~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
+..|+.+.+.....+ +..+|||++.. .+.+..+..++|+.+..+- ..|.+|+++|........++.||.|.- ||+
T Consensus 56 rGayG~vekmrh~~s--g~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sld 132 (282)
T KOG0984|consen 56 RGAYGVVEKMRHIQS--GTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-SLD 132 (282)
T ss_pred CCccchhhheeeccC--CeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-hHH
Confidence 334555555444444 46889999864 3455667889999987765 799999999999899999999999975 887
Q ss_pred hhh----ccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 523 AFL----FRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 523 ~~l----~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
.+- .+...+++...-+|+..+++||.|||++ ..++|||+||+|||++. .+++|++|||++-.+.+.-
T Consensus 133 kfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~-------~GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 133 KFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINY-------DGQVKICDFGISGYLVDSI 203 (282)
T ss_pred HHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEcc-------CCcEEEcccccceeehhhh
Confidence 764 3457789999999999999999999998 68999999999999988 8999999999998765432
Q ss_pred CccccccccCccccchhccc----CCCCCCccceehhHHHHHHHHhCCcCCCCC
Q 039817 599 TRTSTMIRGTMGYMAPEWLR----NAPVTAKVDVYSFGVMLLEIIFCKRHTELH 648 (725)
Q Consensus 599 ~~~~~~~~gt~~y~aPE~~~----~~~~~~ksDv~S~G~vl~elltg~~~~~~~ 648 (725)
. .+...|-..|||||.+. ...|+.||||||||+.+.||.+++.|++..
T Consensus 204 A--kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 204 A--KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred H--HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 1 22234777899999885 347899999999999999999999998754
No 386
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.92 E-value=4.5e-25 Score=198.12 Aligned_cols=238 Identities=25% Similarity=0.256 Sum_probs=180.4
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcc--cccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCCh
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLE--KVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTL 521 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~--~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL 521 (725)
...+|+++++|.+.-+++ .||+|+++ ..++......++|+-+++.++|+|||++++....+....+|+|||.. .|
T Consensus 11 gegtygtvfkarn~~t~e--ivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-dl 87 (292)
T KOG0662|consen 11 GEGTYGTVFKARNRETHE--IVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DL 87 (292)
T ss_pred cCCcceeeEecccCCccc--eEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-HH
Confidence 346788888888766554 67777654 44445567889999999999999999999999999999999999976 78
Q ss_pred hhhhcc-CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 522 SAFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 522 ~~~l~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
.+|... ++.++......++.|+++||.+.|+. ++.|||+||+|.|++. ++..|++|||+++.++-.-..
T Consensus 88 kkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~-------ngelkladfglarafgipvrc 157 (292)
T KOG0662|consen 88 KKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINR-------NGELKLADFGLARAFGIPVRC 157 (292)
T ss_pred HHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEecc-------CCcEEecccchhhhcCCceEe
Confidence 877754 36788899999999999999999999 9999999999999987 899999999999987654322
Q ss_pred cccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCC-cCCCCCCCCccccccCcchHHHHHHHHH-cCC----
Q 039817 601 TSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCK-RHTELHRVDEPTLANGMILTDWVLYCVR-TGN---- 673 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---- 673 (725)
-. ...-|.-|.+|.++.+. .|+...|+||-||++.|+.... +.|...+.++ ++...+. -+.
T Consensus 158 ys-aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvdd-----------qlkrif~~lg~p~ed 225 (292)
T KOG0662|consen 158 YS-AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-----------QLKRIFRLLGTPTED 225 (292)
T ss_pred ee-ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHH-----------HHHHHHHHhCCCccc
Confidence 21 23367889999998765 6899999999999999998644 4444332221 1111111 000
Q ss_pred ----------------CCh---------hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 674 ----------------LGA---------TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 674 ----------------~~~---------~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
++. .....=++++.+.+.-+|.+|.++++.+++
T Consensus 226 ~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 226 QWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred cCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 000 112234567777888899999999998876
No 387
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.92 E-value=2.1e-25 Score=251.41 Aligned_cols=248 Identities=19% Similarity=0.161 Sum_probs=157.1
Q ss_pred ccccHHHHHHHhcccC--CcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeE------EEcCCceeeeeec
Q 039817 444 KVFSYQELREATNVFD--GQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGF------CIEQNHQLLVYEL 515 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~--~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~------~~~~~~~~lV~e~ 515 (725)
...+|+.|++|+..-+ ..+..||||++.... ..+.+..| .+.+..+.+++.++.. +..+...++||||
T Consensus 141 G~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LV~ey 216 (566)
T PLN03225 141 GEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEYWLVWRY 216 (566)
T ss_pred eeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhcccccccCCceEEEEEe
Confidence 3456778888776544 125678999875322 11222222 1222223333322221 2456788999999
Q ss_pred ccCCChhhhhccCCC--------------------CCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCcc
Q 039817 516 MKNGTLSAFLFRQEI--------------------PTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYI 575 (725)
Q Consensus 516 ~~~gsL~~~l~~~~~--------------------l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~ 575 (725)
+++++|.+++..... .....+..++.|++.||.|||+. +|+||||||+|||++.+
T Consensus 217 ~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~NILl~~~-- 291 (566)
T PLN03225 217 EGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQNIIFSEG-- 291 (566)
T ss_pred cCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHHHEEEeCC--
Confidence 999999998865421 11234567999999999999998 99999999999999852
Q ss_pred ccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCC----------------------CCCCccceehhHH
Q 039817 576 TIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA----------------------PVTAKVDVYSFGV 633 (725)
Q Consensus 576 ~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~ksDv~S~G~ 633 (725)
++.+||+|||+++..............+++.|+|||.+... .++.++|||||||
T Consensus 292 ----~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGv 367 (566)
T PLN03225 292 ----SGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGL 367 (566)
T ss_pred ----CCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHH
Confidence 57899999999986544333333445688999999965322 2445679999999
Q ss_pred HHHHHHhCCcCCCCCCCCcc--ccccCcchHHHHHHHHHcCCCCh----------hHHHHHHHHHHHccCCCCCCCCCHH
Q 039817 634 MLLEIIFCKRHTELHRVDEP--TLANGMILTDWVLYCVRTGNLGA----------TKFERITMVGLWCICPQPTLRPSMK 701 (725)
Q Consensus 634 vl~elltg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~l~~~cl~~dp~~RPs~~ 701 (725)
+||||+++..+.+....... ..........|..... ..... .......+|+.+||+.||++|||++
T Consensus 368 iL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~ 445 (566)
T PLN03225 368 IFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVE--PRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAK 445 (566)
T ss_pred HHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhc--cccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHH
Confidence 99999987655432100000 0000111111211100 01110 1122345899999999999999999
Q ss_pred HHHHH
Q 039817 702 QVLQM 706 (725)
Q Consensus 702 evl~~ 706 (725)
|+++|
T Consensus 446 e~L~H 450 (566)
T PLN03225 446 AALAH 450 (566)
T ss_pred HHhCC
Confidence 99987
No 388
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.6e-25 Score=224.56 Aligned_cols=216 Identities=27% Similarity=0.284 Sum_probs=177.9
Q ss_pred cceEEEEEEcccc---cCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHH
Q 039817 461 QEVEVAVKQLEKV---TGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKR 536 (725)
Q Consensus 461 ~~~~vavk~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~ 536 (725)
....+|||.|++. ..++.+--+.|-++|+.. +-|.++++..+++.-+++++||||+.+|+|--+++.-+.+.+..+
T Consensus 373 tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~A 452 (683)
T KOG0696|consen 373 TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVA 452 (683)
T ss_pred cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchh
Confidence 3446788887653 123344456788888876 578999999999999999999999999999999988889999999
Q ss_pred HHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhc
Q 039817 537 VEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEW 616 (725)
Q Consensus 537 ~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~ 616 (725)
.-++..||-||-+||++ +||.||||.+|||||. ++.+||+|||+++.---+. .....++||+.|+|||.
T Consensus 453 vFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~-------eGHiKi~DFGmcKEni~~~-~TTkTFCGTPdYiAPEI 521 (683)
T KOG0696|consen 453 VFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDS-------EGHIKIADFGMCKENIFDG-VTTKTFCGTPDYIAPEI 521 (683)
T ss_pred hhhhHHHHHHhhhhhcC---CeeeeeccccceEecc-------CCceEeeecccccccccCC-cceeeecCCCcccccce
Confidence 99999999999999999 9999999999999988 8999999999998532222 22345789999999999
Q ss_pred ccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCCCChhHHHHHHHHHHHccCCCCC
Q 039817 617 LRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGNLGATKFERITMVGLWCICPQPT 695 (725)
Q Consensus 617 ~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dp~ 695 (725)
+...+|....|.|||||+||||+.|+.||+.++.++ .+..... .-.++...+.+...+....+.+.|.
T Consensus 522 i~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e-----------lF~aI~ehnvsyPKslSkEAv~ickg~ltK~P~ 590 (683)
T KOG0696|consen 522 IAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE-----------LFQAIMEHNVSYPKSLSKEAVAICKGLLTKHPG 590 (683)
T ss_pred EEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH-----------HHHHHHHccCcCcccccHHHHHHHHHHhhcCCc
Confidence 999999999999999999999999999998765332 1111111 2356677778888888999999999
Q ss_pred CCC
Q 039817 696 LRP 698 (725)
Q Consensus 696 ~RP 698 (725)
+|.
T Consensus 591 kRL 593 (683)
T KOG0696|consen 591 KRL 593 (683)
T ss_pred ccc
Confidence 994
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=8.5e-26 Score=232.13 Aligned_cols=223 Identities=22% Similarity=0.233 Sum_probs=190.5
Q ss_pred EEEEEccc---ccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHH
Q 039817 465 VAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIAL 541 (725)
Q Consensus 465 vavk~l~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~ 541 (725)
.|+|.+++ .+....+....|-++|...+.|.||++|--+.+....|++||-|-+|.|...|.+++.++.....-++.
T Consensus 448 fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~a 527 (732)
T KOG0614|consen 448 FALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVA 527 (732)
T ss_pred HHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHH
Confidence 44555443 345566778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCCC
Q 039817 542 GIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP 621 (725)
Q Consensus 542 qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 621 (725)
.+++|+.|||.+ +||.|||||+|.+||. +|-+||.|||.|+.+.... ..-.++||+.|.|||.+.++.
T Consensus 528 cv~EAfeYLH~k---~iIYRDLKPENllLd~-------~Gy~KLVDFGFAKki~~g~--KTwTFcGTpEYVAPEIILnKG 595 (732)
T KOG0614|consen 528 CVLEAFEYLHRK---GIIYRDLKPENLLLDN-------RGYLKLVDFGFAKKIGSGR--KTWTFCGTPEYVAPEIILNKG 595 (732)
T ss_pred HHHHHHHHHHhc---CceeccCChhheeecc-------CCceEEeehhhHHHhccCC--ceeeecCCcccccchhhhccC
Confidence 999999999999 9999999999999988 8999999999999876443 334578999999999999999
Q ss_pred CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCC--
Q 039817 622 VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPS-- 699 (725)
Q Consensus 622 ~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs-- 699 (725)
.+.+.|.||||++++||++|++||...+ .+..-..+..-+..-.+|........+++++....+|.+|.-
T Consensus 596 HD~avDyWaLGIli~ELL~G~pPFs~~d--------pmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~ 667 (732)
T KOG0614|consen 596 HDRAVDYWALGILIYELLTGSPPFSGVD--------PMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQ 667 (732)
T ss_pred cchhhHHHHHHHHHHHHHcCCCCCCCCc--------hHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccc
Confidence 9999999999999999999999998654 233333444444445667777888889999999999999975
Q ss_pred ---HHHHHHHh
Q 039817 700 ---MKQVLQML 707 (725)
Q Consensus 700 ---~~evl~~L 707 (725)
+.+|.+|-
T Consensus 668 ~~gI~DIkkH~ 678 (732)
T KOG0614|consen 668 KGGINDIKKHR 678 (732)
T ss_pred cCChHHHHhhh
Confidence 67777763
No 390
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.92 E-value=2.3e-24 Score=236.82 Aligned_cols=236 Identities=21% Similarity=0.221 Sum_probs=159.8
Q ss_pred cceEEEEEEcccccCccHHHH--------------HHHHHHHhccCcCCc-----cceeeEEEc--------CCceeeee
Q 039817 461 QEVEVAVKQLEKVTGDGEKSF--------------LREVQVIGRTHHKNL-----VQLLGFCIE--------QNHQLLVY 513 (725)
Q Consensus 461 ~~~~vavk~l~~~~~~~~~~f--------------~~E~~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lV~ 513 (725)
.+..||||++........++| ..|+.++.+++|.++ ++++++|.. .+..+|||
T Consensus 185 ~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~ 264 (507)
T PLN03224 185 KKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVW 264 (507)
T ss_pred cCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEE
Confidence 346799999864333333333 346677777766554 778888764 35689999
Q ss_pred ecccCCChhhhhccC------------------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEE
Q 039817 514 ELMKNGTLSAFLFRQ------------------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVL 569 (725)
Q Consensus 514 e~~~~gsL~~~l~~~------------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIl 569 (725)
||+++++|.++++.. ..+++..+..++.|+++||.|||+. +|+||||||+||+
T Consensus 265 Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NIL 341 (507)
T PLN03224 265 KFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLL 341 (507)
T ss_pred EcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEE
Confidence 999999999988642 1235778889999999999999998 9999999999999
Q ss_pred eccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCCC----------------------CCCccc
Q 039817 570 LDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP----------------------VTAKVD 627 (725)
Q Consensus 570 l~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----------------------~~~ksD 627 (725)
++. ++.+||+|||+++..............+++.|+|||.+.... ...+.|
T Consensus 342 l~~-------~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~D 414 (507)
T PLN03224 342 VTV-------DGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFD 414 (507)
T ss_pred ECC-------CCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccc
Confidence 987 778999999999765433222222223578999999875322 123479
Q ss_pred eehhHHHHHHHHhCCc-CCCCCCCCcccc-ccCcchHHHHHHHHHcCCC--ChhHHHHHHHHHHHccCCCC---CCCCCH
Q 039817 628 VYSFGVMLLEIIFCKR-HTELHRVDEPTL-ANGMILTDWVLYCVRTGNL--GATKFERITMVGLWCICPQP---TLRPSM 700 (725)
Q Consensus 628 v~S~G~vl~elltg~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~dp---~~RPs~ 700 (725)
|||+||+++||+++.. ++.......... .....+..|.........+ .....+...+++.+++..+| .+|+|+
T Consensus 415 vwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa 494 (507)
T PLN03224 415 SYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSV 494 (507)
T ss_pred hhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCH
Confidence 9999999999999875 443211100000 0011111121110011111 12345678889999999766 689999
Q ss_pred HHHHHH
Q 039817 701 KQVLQM 706 (725)
Q Consensus 701 ~evl~~ 706 (725)
+|+++|
T Consensus 495 ~eaL~H 500 (507)
T PLN03224 495 GQALSH 500 (507)
T ss_pred HHHhCC
Confidence 999986
No 391
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.3e-25 Score=247.60 Aligned_cols=245 Identities=23% Similarity=0.251 Sum_probs=192.5
Q ss_pred ccccHHHHHHHhcccCCc---------ceEEEEEEccc---ccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceee
Q 039817 444 KVFSYQELREATNVFDGQ---------EVEVAVKQLEK---VTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLL 511 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~---------~~~vavk~l~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 511 (725)
.+-.|..++...++.-|+ +..+|+|++.+ ........|+.|-.+|..-..+-|+.+.-.|.++..+|+
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl 152 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL 152 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence 344555555554444332 34567777765 233445678899999998889999999999999999999
Q ss_pred eeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCc
Q 039817 512 VYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLA 591 (725)
Q Consensus 512 V~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla 591 (725)
|||||+||+|-..+.+...++++-+.-++..|+.||.-||+. ++|||||||+|||||. .|.+||+|||-+
T Consensus 153 VMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~-------~GHikLADFGsC 222 (1317)
T KOG0612|consen 153 VMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDK-------SGHIKLADFGSC 222 (1317)
T ss_pred EEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecc-------cCcEeeccchhH
Confidence 999999999999998888899999999999999999999999 9999999999999988 999999999999
Q ss_pred cccCcCCCccccccccCccccchhccc----C-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHH
Q 039817 592 KLLKKDQTRTSTMIRGTMGYMAPEWLR----N-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVL 666 (725)
Q Consensus 592 ~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (725)
-.+..+..-.....+|||.|.+||+++ + +.|....|.||+||++|||+.|..||......+.. .-+.
T Consensus 223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY--------~KIm 294 (1317)
T KOG0612|consen 223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETY--------GKIM 294 (1317)
T ss_pred HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHH--------HHHh
Confidence 888777666666678999999999985 3 57899999999999999999999999754322110 0011
Q ss_pred HHHHcCCCC--hhHHHHHHHHHHHccCCCCCCCCC---HHHHHHHh
Q 039817 667 YCVRTGNLG--ATKFERITMVGLWCICPQPTLRPS---MKQVLQML 707 (725)
Q Consensus 667 ~~~~~~~~~--~~~~~~l~~l~~~cl~~dp~~RPs---~~evl~~L 707 (725)
.....-.+| ...++...+||...+. +|+.|.. ++++..|-
T Consensus 295 ~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 295 NHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred chhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence 111112333 3467788888888764 6778887 88888764
No 392
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=1.5e-24 Score=212.11 Aligned_cols=237 Identities=23% Similarity=0.259 Sum_probs=190.2
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccccc---CccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVT---GDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
+.+|..+..+....+ .+.+|+|.+++.- ..+.+=...|-.+..+. +||.+|-+..++..+..+++|.||.++|+
T Consensus 260 rgsyakvl~~~~~~t--~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggd 337 (593)
T KOG0695|consen 260 RGSYAKVLLVRLKKT--DQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGD 337 (593)
T ss_pred Ccchhhhhheehccc--ceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcc
Confidence 445666555544433 3567787776432 22233356677777765 79999999999999999999999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
|--++.+++.++++.+.-+...|.-||.|||+. +||.||||.+|+|+|. .+.+|+.|+|+++.--.+..
T Consensus 338 lmfhmqrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvllda-------eghikltdygmcke~l~~gd- 406 (593)
T KOG0695|consen 338 LMFHMQRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDA-------EGHIKLTDYGMCKEGLGPGD- 406 (593)
T ss_pred eeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEcc-------CCceeecccchhhcCCCCCc-
Confidence 999999999999999999999999999999999 9999999999999988 89999999999986443332
Q ss_pred cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc--CCCChhH
Q 039817 601 TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT--GNLGATK 678 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 678 (725)
....++||+.|.|||.+.+..|....|.|++|++++||+.|+.||+....+.+ .+...+++.+.+.. -.+|...
T Consensus 407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~----d~ntedylfqvilekqiriprsl 482 (593)
T KOG0695|consen 407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNP----DMNTEDYLFQVILEKQIRIPRSL 482 (593)
T ss_pred ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCc----ccchhHHHHHHHhhhccccccee
Confidence 23457899999999999999999999999999999999999999987654442 33444555554443 3456666
Q ss_pred HHHHHHHHHHccCCCCCCCC
Q 039817 679 FERITMVGLWCICPQPTLRP 698 (725)
Q Consensus 679 ~~~l~~l~~~cl~~dp~~RP 698 (725)
.-+...+++.-+++||++|.
T Consensus 483 svkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 483 SVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ehhhHHHHHHhhcCCcHHhc
Confidence 67778888899999999984
No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=8.2e-26 Score=215.47 Aligned_cols=250 Identities=28% Similarity=0.307 Sum_probs=188.1
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccC--ccHHHHHHHHHHHhccCcCCccceeeEEEcCC-----ceeeeeecccC
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTG--DGEKSFLREVQVIGRTHHKNLVQLLGFCIEQN-----HQLLVYELMKN 518 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lV~e~~~~ 518 (725)
..|+-++..|+-.+| ..|+.|++..... ...+.+.+|+++|..++|.|++..++...-.. +.|+++|.|..
T Consensus 64 GAFGVVWsVTDPRdg--rrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQS 141 (449)
T KOG0664|consen 64 GAFGVVWSVTDPRSG--KRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQS 141 (449)
T ss_pred cceeEEEeccCCCCc--cchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHh
Confidence 345667777777665 4578888754322 23467899999999999999999999876543 67899999965
Q ss_pred CChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC
Q 039817 519 GTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ 598 (725)
Q Consensus 519 gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~ 598 (725)
+|.+.+-....++-+.+.-++.||++||.|||+. +|+||||||.|.|++. +-..||+|||+++....+.
T Consensus 142 -DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNS-------NCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 142 -DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNS-------NCILKICDFGLARTWDQRD 210 (449)
T ss_pred -hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEecc-------CceEEecccccccccchhh
Confidence 8999998888999999999999999999999999 9999999999999988 7789999999999888777
Q ss_pred CccccccccCccccchhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccc-----cccCcchH------HHHH
Q 039817 599 TRTSTMIRGTMGYMAPEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT-----LANGMILT------DWVL 666 (725)
Q Consensus 599 ~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~-----~~~~~~~~------~~~~ 666 (725)
...++...-|..|.|||.+.+. .|+.+.||||.||++.||+-.+..|.....-++- +.....+. +-..
T Consensus 211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk 290 (449)
T KOG0664|consen 211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAK 290 (449)
T ss_pred hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhH
Confidence 7777777789999999999875 6899999999999999999777666543221100 00000000 0011
Q ss_pred HHHHcCCC-------------ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 039817 667 YCVRTGNL-------------GATKFERITMVGLWCICPQPTLRPSMKQVLQMLE 708 (725)
Q Consensus 667 ~~~~~~~~-------------~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~ 708 (725)
..+.++.. +.....+...+..+++..||++|.+..+.+.++.
T Consensus 291 ~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 291 NHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred HHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 11111111 0122234566778899999999999999988763
No 394
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=6.7e-25 Score=259.94 Aligned_cols=203 Identities=18% Similarity=0.207 Sum_probs=144.9
Q ss_pred hccCc-CCccceeeEEE-------cCCceeeeeecccCCChhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCcee
Q 039817 489 GRTHH-KNLVQLLGFCI-------EQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQII 559 (725)
Q Consensus 489 ~~l~H-~niv~l~g~~~-------~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~iv 559 (725)
++++| .||++++++|. +....++++|+++ ++|.++|... ..+++.++..++.||++||.|||++ +|+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIv 102 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIV 102 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 45666 68889999882 3346778899874 5999999754 5689999999999999999999999 999
Q ss_pred ecCCccceEEeccCcc------------ccCCCCceEEeeccCccccCcCCC---------------ccccccccCcccc
Q 039817 560 HCDIKPQNVLLDNNYI------------TIDNNYITKIADFGLAKLLKKDQT---------------RTSTMIRGTMGYM 612 (725)
Q Consensus 560 H~dik~~NIll~~~~~------------~~~~~~~~kl~Dfgla~~~~~~~~---------------~~~~~~~gt~~y~ 612 (725)
||||||+||||+.... ..+.++.+|++|||+++....... .......||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999964110 002256778888888875321100 0001134788899
Q ss_pred chhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCC
Q 039817 613 APEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICP 692 (725)
Q Consensus 613 aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 692 (725)
|||++.+..++.++|||||||+||||++|..++.... ......... .. .............++.+||++
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---------~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~L~~ 251 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---------RTMSSLRHR-VL-PPQILLNWPKEASFCLWLLHP 251 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---------HHHHHHHHh-hc-ChhhhhcCHHHHHHHHHhCCC
Confidence 9999999999999999999999999999877654211 001111000 00 000011234567888999999
Q ss_pred CCCCCCCHHHHHHH
Q 039817 693 QPTLRPSMKQVLQM 706 (725)
Q Consensus 693 dp~~RPs~~evl~~ 706 (725)
+|.+||+|.||+++
T Consensus 252 ~P~~Rps~~eil~h 265 (793)
T PLN00181 252 EPSCRPSMSELLQS 265 (793)
T ss_pred ChhhCcChHHHhhc
Confidence 99999999999875
No 395
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.90 E-value=2.6e-23 Score=205.28 Aligned_cols=195 Identities=37% Similarity=0.566 Sum_probs=167.8
Q ss_pred ceEEEEEEcccccCc-cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC-CCCCHHHHHHH
Q 039817 462 EVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEI 539 (725)
Q Consensus 462 ~~~vavk~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i 539 (725)
+..+++|.+...... ..+.+.+|++.+++++|++++++++++......++++|++++++|.+++... ..+++..+..+
T Consensus 18 ~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~ 97 (215)
T cd00180 18 GKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRI 97 (215)
T ss_pred CcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHH
Confidence 567888888654332 3578999999999999999999999999999999999999999999999766 57899999999
Q ss_pred HHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccC
Q 039817 540 ALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRN 619 (725)
Q Consensus 540 ~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 619 (725)
+.++++++.|||+. +++|+||+|.||+++.. +..++|+|||.+........ ......+...|++||.+..
T Consensus 98 ~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~------~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~ 167 (215)
T cd00180 98 LLQILEGLEYLHSN---GIIHRDLKPENILLDSD------NGKVKLADFGLSKLLTSDKS-LLKTIVGTPAYMAPEVLLG 167 (215)
T ss_pred HHHHHHHHHHHHhC---CeeccCCCHhhEEEeCC------CCcEEEecCCceEEccCCcc-hhhcccCCCCccChhHhcc
Confidence 99999999999999 99999999999999752 46899999999986644321 1222447788999999987
Q ss_pred C-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCC
Q 039817 620 A-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRP 698 (725)
Q Consensus 620 ~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RP 698 (725)
. ..+.+.|+|++|+++++| ..+.+++.+|++.+|.+||
T Consensus 168 ~~~~~~~~D~~~lg~~~~~l-----------------------------------------~~~~~~l~~~l~~~p~~R~ 206 (215)
T cd00180 168 KGYYSEKSDIWSLGVILYEL-----------------------------------------PELKDLIRKMLQKDPEKRP 206 (215)
T ss_pred cCCCCchhhhHHHHHHHHHH-----------------------------------------HHHHHHHHHHhhCCcccCc
Confidence 7 888999999999999998 5677899999999999999
Q ss_pred CHHHHHHHh
Q 039817 699 SMKQVLQML 707 (725)
Q Consensus 699 s~~evl~~L 707 (725)
++.+++++|
T Consensus 207 ~~~~l~~~~ 215 (215)
T cd00180 207 SAKEILEHL 215 (215)
T ss_pred CHHHHhhCC
Confidence 999998764
No 396
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=3e-24 Score=225.68 Aligned_cols=179 Identities=25% Similarity=0.338 Sum_probs=150.5
Q ss_pred EEEEEEccccc---CccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHH
Q 039817 464 EVAVKQLEKVT---GDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540 (725)
Q Consensus 464 ~vavk~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~ 540 (725)
.+|+|.|++.+ .......+.|-.+|..-+.+-||+||-.|.+++.+|+||||+++|++-.+|-+.+.+++....-++
T Consensus 656 lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYI 735 (1034)
T KOG0608|consen 656 LYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYI 735 (1034)
T ss_pred HHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHH
Confidence 34556665432 223345678999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcccc---------CcCCC------------
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL---------KKDQT------------ 599 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~---------~~~~~------------ 599 (725)
..+..|+++.|+. ++|||||||+|||||. +|.+||.||||+.-+ .....
T Consensus 736 AEltcAiesVHkm---GFIHRDiKPDNILIDr-------dGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~ 805 (1034)
T KOG0608|consen 736 AELTCAIESVHKM---GFIHRDIKPDNILIDR-------DGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEW 805 (1034)
T ss_pred HHHHHHHHHHHhc---cceecccCccceEEcc-------CCceeeeeccccccceeccccccccCCCccccccCCCchhh
Confidence 9999999999998 9999999999999988 899999999998532 11000
Q ss_pred ------------c--------cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCc
Q 039817 600 ------------R--------TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDE 652 (725)
Q Consensus 600 ------------~--------~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~ 652 (725)
+ .....+||..|+|||++....++.-.|.||.||+|+||+.|+.||......+
T Consensus 806 ~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 806 ADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred ccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCc
Confidence 0 0012459999999999999999999999999999999999999997665443
No 397
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=3.5e-23 Score=212.70 Aligned_cols=252 Identities=24% Similarity=0.255 Sum_probs=185.6
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccC-----c---CCccceeeEEEc----CCceee
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTH-----H---KNLVQLLGFCIE----QNHQLL 511 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~-----H---~niv~l~g~~~~----~~~~~l 511 (725)
....|++|+.|.+... ...||+|..+.. ..-.+.-+.||++|++++ | .+||+|+++|.. +.+.+|
T Consensus 87 GWGHFSTVWLawDtq~--~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCM 163 (590)
T KOG1290|consen 87 GWGHFSTVWLAWDTQN--KRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCM 163 (590)
T ss_pred cccccceeEEEeeccC--CeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEE
Confidence 3456777787776654 467899988653 445566789999999874 3 369999999985 458999
Q ss_pred eeecccCCChhhhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCcc--------------
Q 039817 512 VYELMKNGTLSAFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYI-------------- 575 (725)
Q Consensus 512 V~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~-------------- 575 (725)
|+|++.. +|..+|... +.++...+.+|+.||+.||.|||.+| +|||-||||+|||+..+..
T Consensus 164 VfEvLGd-nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~~~~~~~a~e~~~ 240 (590)
T KOG1290|consen 164 VFEVLGD-NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDPAKDAREAGEATT 240 (590)
T ss_pred Eehhhhh-HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccchhhhhhhhccccc
Confidence 9999954 788888655 67899999999999999999999997 9999999999999921100
Q ss_pred ---------------------------------------------------------------------c----------
Q 039817 576 ---------------------------------------------------------------------T---------- 576 (725)
Q Consensus 576 ---------------------------------------------------------------------~---------- 576 (725)
.
T Consensus 241 ~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~ 320 (590)
T KOG1290|consen 241 SLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNESTVERST 320 (590)
T ss_pred cCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCccccchhhcc
Confidence 0
Q ss_pred ------------------------------------------------------------------cCCCCceEEeeccC
Q 039817 577 ------------------------------------------------------------------IDNNYITKIADFGL 590 (725)
Q Consensus 577 ------------------------------------------------------------------~~~~~~~kl~Dfgl 590 (725)
...+..+||+|||-
T Consensus 321 ~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~vKIaDlGN 400 (590)
T KOG1290|consen 321 LEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRVKIADLGN 400 (590)
T ss_pred cccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeEEEeeccc
Confidence 00012457777777
Q ss_pred ccccCcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHH----
Q 039817 591 AKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVL---- 666 (725)
Q Consensus 591 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~---- 666 (725)
|+......+. -..|..|+|||++.+..|+..+||||++|+++||+||-..|+.+..+..... +.++...+.
T Consensus 401 ACW~~khFT~----DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rD-EDHiA~i~ELLG~ 475 (590)
T KOG1290|consen 401 ACWVHKHFTE----DIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRD-EDHIALIMELLGK 475 (590)
T ss_pred hhhhhhhhch----hhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCcc-HHHHHHHHHHHhh
Confidence 7654433322 2357889999999999999999999999999999999999987665542221 112111111
Q ss_pred ---HHHHcC--------------------------------CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 667 ---YCVRTG--------------------------------NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 667 ---~~~~~~--------------------------------~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.....+ ..+.+....+.+++.-||+.+|++|||+.+.+++
T Consensus 476 iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~h 550 (590)
T KOG1290|consen 476 IPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKH 550 (590)
T ss_pred ccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcC
Confidence 111111 1233667789999999999999999999999976
No 398
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=2.5e-23 Score=200.50 Aligned_cols=161 Identities=21% Similarity=0.185 Sum_probs=124.7
Q ss_pred CChhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcC
Q 039817 519 GTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKD 597 (725)
Q Consensus 519 gsL~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~ 597 (725)
|+|.+++... ..+++..+..|+.|+++||.|||+. + ||+||+++. ++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~-------~~~~~~--fG~~~~~~~~ 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTW-------DGLLKL--DGSVAFKTPE 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcC-------ccceee--ccceEeeccc
Confidence 6899999764 5699999999999999999999998 4 999999987 778898 9998865432
Q ss_pred CCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC-----
Q 039817 598 QTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG----- 672 (725)
Q Consensus 598 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 672 (725)
. ..|++.|+|||.+.+..++.++||||||+++|||++|+.|+....... ......... ....
T Consensus 63 ~------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~------~~~~~~~~~-~~~~~~~~~ 129 (176)
T smart00750 63 Q------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS------AILEILLNG-MPADDPRDR 129 (176)
T ss_pred c------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc------HHHHHHHHH-hccCCcccc
Confidence 2 248899999999999999999999999999999999999986432111 111111111 1111
Q ss_pred CCChhHHH--HHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 673 NLGATKFE--RITMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 673 ~~~~~~~~--~l~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
..+....+ .+.+++.+||+.+|++||++.|+++++...
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 01112233 699999999999999999999999998653
No 399
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.89 E-value=5.2e-24 Score=219.64 Aligned_cols=242 Identities=21% Similarity=0.247 Sum_probs=178.9
Q ss_pred HHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccC------cCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 449 QELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTH------HKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 449 ~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~------H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
+.|..|.+.-.+ ..||||++.... --.+.=+.|+++|++|. .-|+++|+-.|.+.+++|||+|.+. .+|.
T Consensus 446 s~Vvra~D~~r~--~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls-lNLR 521 (752)
T KOG0670|consen 446 STVVRARDQARG--QEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS-LNLR 521 (752)
T ss_pred eeeeeccccCCC--CeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh-chHH
Confidence 344444443333 389999996532 22234468999999985 2489999999999999999999875 4899
Q ss_pred hhhccC---CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC
Q 039817 523 AFLFRQ---EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT 599 (725)
Q Consensus 523 ~~l~~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~ 599 (725)
+.|.+. ..|....+..++.|+.-||.+|..- +|+|.||||.||||+++ ...+||||||.|........
T Consensus 522 evLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~------k~iLKLCDfGSA~~~~enei 592 (752)
T KOG0670|consen 522 EVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNES------KNILKLCDFGSASFASENEI 592 (752)
T ss_pred HHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccC------cceeeeccCccccccccccc
Confidence 999765 3577889999999999999999997 99999999999999875 77899999999987765543
Q ss_pred ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccc---------cccCcc----------
Q 039817 600 RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPT---------LANGMI---------- 660 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~---------~~~~~~---------- 660 (725)
.. ..-+..|.|||.+.+.+|+-..|+||.||.||||.||+..|.......-- ....+.
T Consensus 593 tP---YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHF 669 (752)
T KOG0670|consen 593 TP---YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHF 669 (752)
T ss_pred cH---HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhc
Confidence 22 22355799999999999999999999999999999999888654322100 000000
Q ss_pred ----------------------------hHHHHHHHHHcCCCCh---hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 661 ----------------------------LTDWVLYCVRTGNLGA---TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 661 ----------------------------~~~~~~~~~~~~~~~~---~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..+....+.....++. .....+.+|+..|+..||++|.|..|+++|
T Consensus 670 D~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 670 DQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred ccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 0011111111111222 345578889999999999999999999876
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.89 E-value=6.3e-24 Score=225.34 Aligned_cols=237 Identities=22% Similarity=0.277 Sum_probs=190.9
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhh
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~ 523 (725)
...+|+++++|.+..+++-.+|+|-+| ....+.+-..+|+-+++..+|+|||.++|.+...+..+++|||+.+|+|++
T Consensus 24 gsgTygdvyKaRd~~s~elaavkvVkL--ep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQd 101 (829)
T KOG0576|consen 24 GSGTYGDVYKARDKRSGELAAVKVVKL--EPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQD 101 (829)
T ss_pred cCCcccchhhhcccccCchhhheeeec--cCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccc
Confidence 456899999999998887554444444 456667778899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcccc
Q 039817 524 FLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTST 603 (725)
Q Consensus 524 ~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~ 603 (725)
.-+-...+++.++...++...+||.|||.. +=+|||||-.||++++ .+.+|++|||.+-.+..--. ...
T Consensus 102 iy~~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd-------~gDvklaDfgvsaqitati~-Krk 170 (829)
T KOG0576|consen 102 IYHVTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTD-------EGDVKLADFGVSAQITATIA-KRK 170 (829)
T ss_pred eeeecccchhHHHHHHHhhhhccchhhhcC---Ccccccccccceeecc-------cCceeecccCchhhhhhhhh-hhh
Confidence 999999999999999999999999999999 8899999999999988 89999999999876543222 233
Q ss_pred ccccCccccchhcc---cCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCC-----
Q 039817 604 MIRGTMGYMAPEWL---RNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLG----- 675 (725)
Q Consensus 604 ~~~gt~~y~aPE~~---~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 675 (725)
.+.||+.|||||+. ..+.|..++|||+.|+...|+---..|-... +...+..++.+..+.
T Consensus 171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl------------hpmr~l~LmTkS~~qpp~lk 238 (829)
T KOG0576|consen 171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL------------HPMRALFLMTKSGFQPPTLK 238 (829)
T ss_pred cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc------------chHHHHHHhhccCCCCCccc
Confidence 46799999999986 4567999999999999999886545443211 111122222222111
Q ss_pred --hhHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 039817 676 --ATKFERITMVGLWCICPQPTLRPSMKQVLQ 705 (725)
Q Consensus 676 --~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 705 (725)
....+.+-++++.|+.++|++||+++.++.
T Consensus 239 Dk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 145677889999999999999999987765
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.88 E-value=1.4e-23 Score=219.16 Aligned_cols=186 Identities=25% Similarity=0.333 Sum_probs=153.9
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEcccccCc--------cHHHHHHHHHHHhccC---cCCccceeeEEEcCCceeeeee
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQLEKVTGD--------GEKSFLREVQVIGRTH---HKNLVQLLGFCIEQNHQLLVYE 514 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~--------~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~e 514 (725)
..|+.++.|+.... ...|.||.+.+..-- ..-..-.|+++|++++ |+||++++++|++++.+||+||
T Consensus 572 GAyGkV~lai~K~n--~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te 649 (772)
T KOG1152|consen 572 GAYGKVNLAIHKEN--NYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETE 649 (772)
T ss_pred cccceEEEeeeccc--ceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEec
Confidence 34666666665544 578889988643110 1112447999999997 9999999999999999999999
Q ss_pred ccc-CCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 515 LMK-NGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 515 ~~~-~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
-.. +.+|.+++..+..+++.....|+.||+.|++|||++ +|||||||-+|+.++. +|-+||+|||.+..
T Consensus 650 ~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~-------~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 650 VHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDS-------NGFVKLIDFGSAAY 719 (772)
T ss_pred CCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEec-------CCeEEEeeccchhh
Confidence 874 679999999999999999999999999999999999 9999999999999987 89999999999876
Q ss_pred cCcCCCccccccccCccccchhcccCCCCC-CccceehhHHHHHHHHhCCcCCC
Q 039817 594 LKKDQTRTSTMIRGTMGYMAPEWLRNAPVT-AKVDVYSFGVMLLEIIFCKRHTE 646 (725)
Q Consensus 594 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDv~S~G~vl~elltg~~~~~ 646 (725)
.... ....++||.+|.|||++.+.+|- ..-|||++|++||-++....|+.
T Consensus 720 ~ksg---pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 720 TKSG---PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred hcCC---CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 5433 23347799999999999988875 45899999999999987766653
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.87 E-value=6e-22 Score=198.39 Aligned_cols=176 Identities=32% Similarity=0.483 Sum_probs=153.4
Q ss_pred ceEEEEEEcccccCc-cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCC-CCHHHHHHH
Q 039817 462 EVEVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEI-PTWDKRVEI 539 (725)
Q Consensus 462 ~~~vavk~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-l~~~~~~~i 539 (725)
+..+++|.+...... ..+.+.+|++.+.+++|+|++++++++......++++|++++++|.+++..... +++..+..+
T Consensus 24 ~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 103 (225)
T smart00221 24 GELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFY 103 (225)
T ss_pred CcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHH
Confidence 457899998765444 577899999999999999999999999999999999999999999999987766 899999999
Q ss_pred HHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcc-c
Q 039817 540 ALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWL-R 618 (725)
Q Consensus 540 ~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~-~ 618 (725)
+.+++.++.+||+. +++|+||+|+||+++. ++.++|+|||.+...............++..|++||.+ .
T Consensus 104 ~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~-------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~ 173 (225)
T smart00221 104 LRQILEALEYLHSL---GIVHRDLKPENILLGM-------DGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLG 173 (225)
T ss_pred HHHHHHHHHHHHhC---CeecCCCCHHHEEEcC-------CCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcC
Confidence 99999999999999 9999999999999987 68999999999987655431122234577889999998 6
Q ss_pred CCCCCCccceehhHHHHHHHHhCCcCCCC
Q 039817 619 NAPVTAKVDVYSFGVMLLEIIFCKRHTEL 647 (725)
Q Consensus 619 ~~~~~~ksDv~S~G~vl~elltg~~~~~~ 647 (725)
...++.++|||+||++++||++|+.||..
T Consensus 174 ~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 174 GKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 67788899999999999999999999954
No 403
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.87 E-value=2.6e-22 Score=187.24 Aligned_cols=244 Identities=19% Similarity=0.231 Sum_probs=178.4
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccC-cCCccceeeEEEcC--CceeeeeecccCCC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQ--NHQLLVYELMKNGT 520 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lV~e~~~~gs 520 (725)
.+..|+|++.+.+.-+.+ .+.||.|+.. ..+.+.+|+.+|..|+ ||||++|++...+. ....||+||..+.+
T Consensus 47 GRGKYSEVFeg~~~~~~e--K~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~D 121 (338)
T KOG0668|consen 47 GRGKYSEVFEGINITNNE--KCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTD 121 (338)
T ss_pred cCccHhhHhcccccCCCc--eEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhcccc
Confidence 456788888877665544 5677777643 4567899999999997 99999999998764 46789999999876
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR 600 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~ 600 (725)
..... ..++-..+.-.+.++++||.|+|+. +|+|||+||.|+++|.. ....+|+|+|||..+......
T Consensus 122 fk~ly---~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~------~rkLrlIDWGLAEFYHp~~eY 189 (338)
T KOG0668|consen 122 FKQLY---PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHE------LRKLRLIDWGLAEFYHPGKEY 189 (338)
T ss_pred HHHHh---hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechh------hceeeeeecchHhhcCCCcee
Confidence 55443 4456667788899999999999999 99999999999999874 667999999999987655433
Q ss_pred cccccccCccccchhcccC-CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccc------cCcchHHHHHHHHH---
Q 039817 601 TSTMIRGTMGYMAPEWLRN-APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLA------NGMILTDWVLYCVR--- 670 (725)
Q Consensus 601 ~~~~~~gt~~y~aPE~~~~-~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~--- 670 (725)
.. ...+..|--||.+-. ..|+-.-|+|||||++.+|+..+.||.-.......+. ....+..++.....
T Consensus 190 nV--RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ld 267 (338)
T KOG0668|consen 190 NV--RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLD 267 (338)
T ss_pred ee--eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCC
Confidence 22 224556788998754 5688899999999999999999999864433221110 00111111111100
Q ss_pred --------cCC-C---------Ch-hHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 671 --------TGN-L---------GA-TKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 671 --------~~~-~---------~~-~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
... - .. -..++..+++.+.|..|-++|||++|.+.+
T Consensus 268 p~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 268 PQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred hhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 000 0 00 123678899999999999999999998865
No 404
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation. This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen
Probab=99.87 E-value=2.8e-22 Score=175.68 Aligned_cols=106 Identities=26% Similarity=0.637 Sum_probs=90.3
Q ss_pred eecCCCCCCccceeeecc----cceEEeeCceeeeeeeeeccCCCCCceEEEEEEcCCCcEEEEEecCCCCCCceEEecc
Q 039817 167 WYTSTRGDQNVSLIFNQS----TSFLYVRNKTTIRYPMTTQVPTPTEDYYHRATISDHGNFQQWVHNKRDGNGWAVVWEA 242 (725)
Q Consensus 167 w~~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~~~~~~~~r~~l~~~G~l~~~~~~~~~~~~W~~~~~~ 242 (725)
|++|+|++..+..++.+. ..+.|+.+.++.++++...+ .+.++|++||.+|++++|.|.+. .+.|..+|++
T Consensus 1 wrsG~WnG~~f~g~p~~~~~~~~~~~fv~~~~e~~~t~~~~~----~s~~~r~~ld~~G~l~~~~w~~~-~~~W~~~~~~ 75 (110)
T PF00954_consen 1 WRSGPWNGQRFSGIPEMSSNSLYNYSFVSNNEEVYYTYSLSN----SSVLSRLVLDSDGQLQRYIWNES-TQSWSVFWSA 75 (110)
T ss_pred CCccccCCeEECCcccccccceeEEEEEECCCeEEEEEecCC----CceEEEEEEeeeeEEEEEEEecC-CCcEEEEEEe
Confidence 788889888877666654 33478899999999987654 45789999999999999999875 4679999999
Q ss_pred ccCCCCcccccCCCCeeecCCCCceeeccCCCCCcCC
Q 039817 243 ITEPCTVNTICGVFGFCTSDNNKEVTCECLRGYSPVD 279 (725)
Q Consensus 243 ~~~~Cd~~~~CG~~g~C~~~~~~~~~C~Cl~GF~p~~ 279 (725)
|.++||+|+.||+||+|+ .+..+.|.||+||+|++
T Consensus 76 p~d~Cd~y~~CG~~g~C~--~~~~~~C~Cl~GF~P~n 110 (110)
T PF00954_consen 76 PKDQCDVYGFCGPNGICN--SNNSPKCSCLPGFEPKN 110 (110)
T ss_pred cccCCCCccccCCccEeC--CCCCCceECCCCcCCCc
Confidence 999999999999999995 45678999999999975
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.85 E-value=2.6e-21 Score=185.11 Aligned_cols=249 Identities=16% Similarity=0.245 Sum_probs=176.7
Q ss_pred CCCCcccccHHHHHHHhc-----cc--------CCcceEEEEEEcccccCccHHHHHHHHHHHhcc-CcCCccceeeE-E
Q 039817 439 PEINMKVFSYQELREATN-----VF--------DGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGF-C 503 (725)
Q Consensus 439 ~~~~~~~~~~~~l~~a~~-----~~--------~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~-~ 503 (725)
+...++..++.+.+.... .| .+....+++|.+... ....++|.+|..---.| .|.||+.-|+. |
T Consensus 13 ~~~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaF 91 (378)
T KOG1345|consen 13 PMEELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAF 91 (378)
T ss_pred ccccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHh
Confidence 334455666666554332 22 245677888887542 34567899998765555 69999987775 6
Q ss_pred EcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCce
Q 039817 504 IEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYIT 583 (725)
Q Consensus 504 ~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~ 583 (725)
+..+...+++||++.|+|..-+... .+-+..-.+++.|+++||.|+|++ ++||||||.+|||+-.. +..++
T Consensus 92 qt~d~YvF~qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~-----df~rv 162 (378)
T KOG1345|consen 92 QTSDAYVFVQEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDA-----DFYRV 162 (378)
T ss_pred hcCceEEEeeccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecC-----CccEE
Confidence 6777888999999999999888653 466778889999999999999999 99999999999998652 25699
Q ss_pred EEeeccCccccCcCCCccccccccCccccchhcccCC-----CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccC
Q 039817 584 KIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNA-----PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANG 658 (725)
Q Consensus 584 kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~ 658 (725)
||+|||+.+..+.- .....-+..|.+||..... ...+.+|||.||++++..+||+.|+.......
T Consensus 163 KlcDFG~t~k~g~t----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d------ 232 (378)
T KOG1345|consen 163 KLCDFGLTRKVGTT----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD------ 232 (378)
T ss_pred EeeecccccccCce----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC------
Confidence 99999998854321 1122245579999976432 35778999999999999999999998443332
Q ss_pred cchHHHHHHHHHc-CCCCh---hHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 659 MILTDWVLYCVRT-GNLGA---TKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 659 ~~~~~~~~~~~~~-~~~~~---~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
....+|.....+. ...|. ...+++.++.++-+.+++++|-...++.++.
T Consensus 233 ~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 233 KPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred chHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 1122222221111 11222 4567888889999999999996655555543
No 406
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.85 E-value=4e-21 Score=195.44 Aligned_cols=250 Identities=22% Similarity=0.252 Sum_probs=187.0
Q ss_pred cccccHHHHHHHhccc-CCcceEEEEEEcccccCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCC
Q 039817 443 MKVFSYQELREATNVF-DGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~-~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
....+|+.+++|+..- +.....||+|.+..+ +....+.+|++.|..+ -+.||+++.+++..++...+|+||++...
T Consensus 44 igeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~ 121 (418)
T KOG1167|consen 44 IGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDR 121 (418)
T ss_pred ccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccC
Confidence 3467889999988765 446678999999754 3456689999999998 59999999999999999999999999988
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC--
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ-- 598 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~-- 598 (725)
..+++. .++...+...+..+..||.|+|+. +||||||||+|+|.+.. .+.-.|.|||||.......
T Consensus 122 f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~------t~rg~LvDFgLA~~~d~~~~~ 189 (418)
T KOG1167|consen 122 FRDLYR---SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRR------TQRGVLVDFGLAQRYDGYQQT 189 (418)
T ss_pred HHHHHh---cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccc------cCCceEEechhHHHHHhhhhh
Confidence 877774 456888999999999999999999 99999999999998763 5677899999997210000
Q ss_pred -----------C----------------------c------c--ccccccCccccchhccc-CCCCCCccceehhHHHHH
Q 039817 599 -----------T----------------------R------T--STMIRGTMGYMAPEWLR-NAPVTAKVDVYSFGVMLL 636 (725)
Q Consensus 599 -----------~----------------------~------~--~~~~~gt~~y~aPE~~~-~~~~~~ksDv~S~G~vl~ 636 (725)
. . . .....||+||.|||++. ....+++.||||-|++++
T Consensus 190 ~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~L 269 (418)
T KOG1167|consen 190 EHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILL 269 (418)
T ss_pred hhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceee
Confidence 0 0 0 01134999999999875 456789999999999999
Q ss_pred HHHhCCcCCCCCCCCccccccCcc------hHH--------------------HHHHHHH--------cCC--------C
Q 039817 637 EIIFCKRHTELHRVDEPTLANGMI------LTD--------------------WVLYCVR--------TGN--------L 674 (725)
Q Consensus 637 elltg~~~~~~~~~~~~~~~~~~~------~~~--------------------~~~~~~~--------~~~--------~ 674 (725)
-+++++.||.....+...+.+... +.+ .....+. ... .
T Consensus 270 slls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~ 349 (418)
T KOG1167|consen 270 SLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIG 349 (418)
T ss_pred hhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccc
Confidence 999999999755444332211000 000 0000000 000 0
Q ss_pred ChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 675 GATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 675 ~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
....+..+.+++.+|++.||.+|.|+++.++|
T Consensus 350 ~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 350 SDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 01223478899999999999999999999976
No 407
>cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.
Probab=99.82 E-value=1.4e-19 Score=160.48 Aligned_cols=100 Identities=29% Similarity=0.454 Sum_probs=87.1
Q ss_pred ceeeCCCCeeeeCCCeEEEeeeeCCCCC-EEEEEEeccCCCCeEEEEeCCCCCCCCCceEEEcccccEEEEcCCCceEEE
Q 039817 33 NIIAGTNSTWPSTSGDFAFGFYPLVSGL-FLVGIWFDKISERTLVWSANRDDPAQVGSSINLTVTGQLVLTHSNGTQFKI 111 (725)
Q Consensus 33 ~l~~~~~~~lvS~~g~F~lGFf~~~~~~-~ylgIw~~~~~~~tvVWvANr~~Pv~~~s~l~l~~~G~LvL~~~~~~~~ws 111 (725)
.|+. +++|+|++|.|++|||...... .+.+|||.+++ +++||+|||+.|...++.+.|+.+|+|+|.|.+|.++|+
T Consensus 3 ~l~~--~~~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~~~-~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~ 79 (116)
T cd00028 3 PLSS--GQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSS-RTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWS 79 (116)
T ss_pred CcCC--CCEEEeCCCcEEEecccCCCCCCeEEEEEEeCCC-CeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEE
Confidence 4444 7899999999999999776665 99999999887 899999999999767789999999999999999999998
Q ss_pred eccC---ceeEEEEecCCCeEEecCCC
Q 039817 112 YNGT---LTVSALMQDSGNFLYSNANG 135 (725)
Q Consensus 112 ~~~~---~~~~a~LldsGNlVl~~~~~ 135 (725)
++.. ...+|+|+|+|||||++.++
T Consensus 80 S~~~~~~~~~~~~L~ddGnlvl~~~~~ 106 (116)
T cd00028 80 SNTTRVNGNYVLVLLDDGNLVLYDSDG 106 (116)
T ss_pred ecccCCCCceEEEEeCCCCEEEECCCC
Confidence 7753 45679999999999998654
No 408
>smart00108 B_lectin Bulb-type mannose-specific lectin.
Probab=99.80 E-value=3.7e-19 Score=157.34 Aligned_cols=96 Identities=30% Similarity=0.456 Sum_probs=86.0
Q ss_pred CCeeeeCCCeEEEeeeeCCCCCEEEEEEeccCCCCeEEEEeCCCCCCCCCceEEEcccccEEEEcCCCceEEEeccC---
Q 039817 39 NSTWPSTSGDFAFGFYPLVSGLFLVGIWFDKISERTLVWSANRDDPAQVGSSINLTVTGQLVLTHSNGTQFKIYNGT--- 115 (725)
Q Consensus 39 ~~~lvS~~g~F~lGFf~~~~~~~ylgIw~~~~~~~tvVWvANr~~Pv~~~s~l~l~~~G~LvL~~~~~~~~ws~~~~--- 115 (725)
+++|+|++|.|++|||......++.+|||++.+ +++||+|||+.|+.+++.|.|..+|+|+|.+.+|.++|+++..
T Consensus 7 ~~~l~s~~~~f~~G~~~~~~q~dgnlV~~~~~~-~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~t~~~~ 85 (114)
T smart00108 7 GQTLVSGNSLFELGFFTLIMQNDYNLILYKSSS-RTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSSNTTGAN 85 (114)
T ss_pred CCEEecCCCcEeeeccccCCCCCEEEEEEECCC-CcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEecccCCC
Confidence 789999999999999987777799999999987 8999999999999887899999999999999999999987653
Q ss_pred ceeEEEEecCCCeEEecCCC
Q 039817 116 LTVSALMQDSGNFLYSNANG 135 (725)
Q Consensus 116 ~~~~a~LldsGNlVl~~~~~ 135 (725)
....|+|+|+|||||++..+
T Consensus 86 ~~~~~~L~ddGnlvl~~~~~ 105 (114)
T smart00108 86 GNYVLVLLDDGNLVIYDSDG 105 (114)
T ss_pred CceEEEEeCCCCEEEECCCC
Confidence 44679999999999997653
No 409
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=3.8e-20 Score=176.92 Aligned_cols=217 Identities=22% Similarity=0.330 Sum_probs=165.3
Q ss_pred cccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCC--CCCHHHHHHHHHHHHHHh
Q 039817 470 LEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQE--IPTWDKRVEIALGIARGL 547 (725)
Q Consensus 470 l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~qia~gL 547 (725)
+........+.|..|.-.|+-+.||||+.++|.|.......++..||+.|||...|+.+. ..+..+.++++.++|+|+
T Consensus 223 vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargm 302 (448)
T KOG0195|consen 223 VREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGM 302 (448)
T ss_pred hhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhH
Confidence 333344445679999999999999999999999999999999999999999999998874 357789999999999999
Q ss_pred hhhhcccCCcee-ecCCccceEEeccCccccCCCCceEEe--eccCccccCcCCCccccccccCccccchhcccCCCC--
Q 039817 548 LYLHEECETQII-HCDIKPQNVLLDNNYITIDNNYITKIA--DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV-- 622 (725)
Q Consensus 548 ~yLH~~~~~~iv-H~dik~~NIll~~~~~~~~~~~~~kl~--Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-- 622 (725)
+|||+.. +++ ---|.+..+++|+ +.+++|+ |--.+. +. ....-.+.||+||.++.++-
T Consensus 303 aflhsle--p~ipr~~lns~hvmide-------dltarismad~kfsf--qe------~gr~y~pawmspealqrkped~ 365 (448)
T KOG0195|consen 303 AFLHSLE--PMIPRFYLNSKHVMIDE-------DLTARISMADTKFSF--QE------VGRAYSPAWMSPEALQRKPEDL 365 (448)
T ss_pred HHHhhcc--hhhhhhhcccceEEecc-------hhhhheecccceeee--ec------cccccCcccCCHHHHhcCchhc
Confidence 9999862 344 4468889999988 5566653 221111 10 11124578999999987643
Q ss_pred -CCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHH
Q 039817 623 -TAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMK 701 (725)
Q Consensus 623 -~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~ 701 (725)
-.++|+|||.+++|||.|...||..-..-+. ++. .+.+ -.+..++......+.+|+.-|+..||.+||.++
T Consensus 366 n~raadmwsfaillwel~trevpfadlspmec----gmk---iale-glrv~ippgis~hm~klm~icmnedpgkrpkfd 437 (448)
T KOG0195|consen 366 NIRAADMWSFAILLWELNTREVPFADLSPMEC----GMK---IALE-GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFD 437 (448)
T ss_pred chhhhhHHHHHHHHHHhhccccccccCCchhh----hhh---hhhc-cccccCCCCccHHHHHHHHHHhcCCCCcCCCcc
Confidence 3469999999999999999999875432221 111 1111 123467778888999999999999999999999
Q ss_pred HHHHHhcCCC
Q 039817 702 QVLQMLEGTS 711 (725)
Q Consensus 702 evl~~L~~~~ 711 (725)
.|+-+||+..
T Consensus 438 mivpilekm~ 447 (448)
T KOG0195|consen 438 MIVPILEKMI 447 (448)
T ss_pred eehhhHHHhc
Confidence 9999998753
No 410
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=3.7e-19 Score=190.74 Aligned_cols=212 Identities=26% Similarity=0.411 Sum_probs=162.8
Q ss_pred HhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccC-CCCCHHHHHHHHHHHHHHhhhhhcccCCce-eecCCcc
Q 039817 488 IGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIARGLLYLHEECETQI-IHCDIKP 565 (725)
Q Consensus 488 l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~i-vH~dik~ 565 (725)
|+.+.|.|+.+++|.+..+...+.|.+|+..|+|.|.+... ..+++.-...++.+++.||.|||.. +| .|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeecc
Confidence 45789999999999999999999999999999999999874 5789999999999999999999998 55 9999999
Q ss_pred ceEEeccCccccCCCCceEEeeccCccccCcC-CCccccccccCccccchhcccCC-------CCCCccceehhHHHHHH
Q 039817 566 QNVLLDNNYITIDNNYITKIADFGLAKLLKKD-QTRTSTMIRGTMGYMAPEWLRNA-------PVTAKVDVYSFGVMLLE 637 (725)
Q Consensus 566 ~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-------~~~~ksDv~S~G~vl~e 637 (725)
+|+++|. .+.+||+|||+....... .............|.|||.+... ..+.+.||||||++++|
T Consensus 78 ~nClvd~-------~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~e 150 (484)
T KOG1023|consen 78 SNCLVDS-------RWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYE 150 (484)
T ss_pred ccceeee-------eEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHH
Confidence 9999988 899999999998876431 11111112245579999998753 24778999999999999
Q ss_pred HHhCCcCCCCCCCCccccccCcchHHHHHHHHHc---CCCC-h-hHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 039817 638 IIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT---GNLG-A-TKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTSE 712 (725)
Q Consensus 638 lltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~-~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~~ 712 (725)
+++.+.||......... ..+...+...... ..+. . +..+.+..++..||..+|.+||++++|...++.+..
T Consensus 151 i~~r~~~~~~~~~~~~~----~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 151 ILFRSGPFDLRNLVEDP----DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred HHhccCccccccccCCh----HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 99999999865433211 1111111110000 0011 1 334478999999999999999999999999987765
Q ss_pred C
Q 039817 713 V 713 (725)
Q Consensus 713 ~ 713 (725)
.
T Consensus 227 ~ 227 (484)
T KOG1023|consen 227 G 227 (484)
T ss_pred c
Confidence 4
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=7.6e-20 Score=205.65 Aligned_cols=213 Identities=23% Similarity=0.269 Sum_probs=168.1
Q ss_pred HHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceee
Q 039817 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIH 560 (725)
Q Consensus 481 f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH 560 (725)
+..|+-+-..++|+|++..+..+.+.....-+|||++. +|..++.+...+....+..++.|+..|+.|||+. +|.|
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~---Giah 443 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM---GLAH 443 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc---Ccee
Confidence 55677777889999999888888777766666999999 9999998877888899999999999999999999 9999
Q ss_pred cCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc---cccccccCccccchhcccCCCCCCc-cceehhHHHHH
Q 039817 561 CDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR---TSTMIRGTMGYMAPEWLRNAPVTAK-VDVYSFGVMLL 636 (725)
Q Consensus 561 ~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~k-sDv~S~G~vl~ 636 (725)
||+|++|+++.. ++.+||+|||.+..+...... ....+.|+..|+|||.+.+..|.+. .||||.|+++.
T Consensus 444 rdlK~enll~~~-------~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~ 516 (601)
T KOG0590|consen 444 RDLKLENLLVTE-------NGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYI 516 (601)
T ss_pred ccCccccEEEec-------CCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEE
Confidence 999999999988 889999999999876554433 2334779999999999999988865 89999999999
Q ss_pred HHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 039817 637 EIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQ 705 (725)
Q Consensus 637 elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~ 705 (725)
.|++|+.||......+.... ......+.........+....+.+.+.++.++|+.+|.+|.|+++|++
T Consensus 517 ~m~~~~~~Wk~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 517 CMILGRFPWKVAKKSDNSFK-TNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred EEecCCCccccccccccchh-hhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 99999999987655432210 000000000000001122245677889999999999999999999985
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=4.6e-18 Score=179.47 Aligned_cols=157 Identities=19% Similarity=0.138 Sum_probs=115.7
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccc-----cCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeeccc
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKV-----TGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMK 517 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~ 517 (725)
+.+..|+.+++|...... +..||||++... .....+.|.+|+++|++++|+|+++.+.. .+..+|||||++
T Consensus 26 IG~G~fg~Vy~a~~~~~~-~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~LVmE~~~ 101 (365)
T PRK09188 26 LKRDVFSTVERGYFAGDP-GTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGLVRGWTE 101 (365)
T ss_pred EeecCcEEEEEEEEcCCC-CeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEEEEEccC
Confidence 345678888888765432 234788886532 12235679999999999999999853322 246799999999
Q ss_pred CCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCC-ccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 518 NGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI-KPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 518 ~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~di-k~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
+++|... .... ...++.|+++||.|||+. +|+|||| ||+|||++. ++.+||+|||+++.+..
T Consensus 102 G~~L~~~-~~~~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~-------~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 102 GVPLHLA-RPHG------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGP-------DGEAAVIDFQLASVFRR 164 (365)
T ss_pred CCCHHHh-Cccc------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcC-------CCCEEEEECccceeccc
Confidence 9999732 1111 246789999999999999 9999999 999999976 67899999999997654
Q ss_pred CCCccc-------cccccCccccchhcccCC
Q 039817 597 DQTRTS-------TMIRGTMGYMAPEWLRNA 620 (725)
Q Consensus 597 ~~~~~~-------~~~~gt~~y~aPE~~~~~ 620 (725)
...... +...++..|+|||.+...
T Consensus 165 ~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 165 RGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 322111 234578889999998643
No 413
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.72 E-value=1.3e-16 Score=168.93 Aligned_cols=230 Identities=30% Similarity=0.381 Sum_probs=175.7
Q ss_pred eEEEEEEcccccCc---cHHHHHHHHHHHhccCcC-CccceeeEEEcCCceeeeeecccCCChhhhhccCC---CCCHHH
Q 039817 463 VEVAVKQLEKVTGD---GEKSFLREVQVIGRTHHK-NLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQE---IPTWDK 535 (725)
Q Consensus 463 ~~vavk~l~~~~~~---~~~~f~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~---~l~~~~ 535 (725)
..+++|.+...... ....|.+|+.+++.+.|+ +++++++.+......++++|++.+++|.+++.... .+....
T Consensus 23 ~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 102 (384)
T COG0515 23 KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESE 102 (384)
T ss_pred cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHH
Confidence 46788887654333 367899999999999887 79999999977777899999999999997776654 789999
Q ss_pred HHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCC-ceEEeeccCccccCcCCCc-----cccccccCc
Q 039817 536 RVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNY-ITKIADFGLAKLLKKDQTR-----TSTMIRGTM 609 (725)
Q Consensus 536 ~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~-~~kl~Dfgla~~~~~~~~~-----~~~~~~gt~ 609 (725)
...+..|++.++.|+|+. +++|||+||+||+++. .. .+++.|||+++........ ......|+.
T Consensus 103 ~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~ 172 (384)
T COG0515 103 ALFILAQILSALEYLHSK---GIIHRDIKPENILLDR-------DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTP 172 (384)
T ss_pred HHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecC-------CCCeEEEeccCcceecCCCCcccccccccccccccc
Confidence 999999999999999999 9999999999999987 55 7999999999865443322 224456999
Q ss_pred cccchhcccC---CCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc---CCCChh----HH
Q 039817 610 GYMAPEWLRN---APVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT---GNLGAT----KF 679 (725)
Q Consensus 610 ~y~aPE~~~~---~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~ 679 (725)
.|+|||.+.+ .......|+||+|++++++++|..|+....... ......+.+...... ...... ..
T Consensus 173 ~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (384)
T COG0515 173 GYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSS----ATSQTLKIILELPTPSLASPLSPSNPELIS 248 (384)
T ss_pred ccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc----cHHHHHHHHHhcCCcccccccCccccchhh
Confidence 9999999987 678999999999999999999999955443210 001111111111100 001111 12
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 680 ERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 680 ~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
..+.+++..++..+|..|.++.+....
T Consensus 249 ~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 249 KAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 578889999999999999999887764
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.71 E-value=8e-18 Score=188.41 Aligned_cols=227 Identities=22% Similarity=0.216 Sum_probs=165.4
Q ss_pred EEEEEEcccc-cCccHHHHHHHHHHHh--ccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHH
Q 039817 464 EVAVKQLEKV-TGDGEKSFLREVQVIG--RTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540 (725)
Q Consensus 464 ~vavk~l~~~-~~~~~~~f~~E~~~l~--~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~ 540 (725)
.|.||.+-+. ..-..+.|.++++-++ .++|||.+++.-+-..+...|||-+|..+ +|.|.|..+..+..-+..-|+
T Consensus 48 ~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlSTRPFL~~iEKkWia 126 (1431)
T KOG1240|consen 48 LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLSTRPFLVLIEKKWIA 126 (1431)
T ss_pred eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhccchHHHHHHHHHHH
Confidence 3777776433 3455677776666554 45899999998888788888999999977 899999888788888899999
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccc--cCcCCCccccc----cccCccccch
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL--LKKDQTRTSTM----IRGTMGYMAP 614 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~--~~~~~~~~~~~----~~gt~~y~aP 614 (725)
.|++.||.-+|+. +|+|||||.+||||+. -..+.|+||...+. +.++....... .+.-..|+||
T Consensus 127 FQLL~al~qcH~~---gVcHGDIKsENILiTS-------WNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAP 196 (1431)
T KOG1240|consen 127 FQLLKALSQCHKL---GVCHGDIKSENILITS-------WNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAP 196 (1431)
T ss_pred HHHHHHHHHHHHc---CccccccccceEEEee-------echhhhhcccccCCccCCCCCcccceEEEecCCceeeecCh
Confidence 9999999999999 9999999999999987 77789999988763 33333322221 1233479999
Q ss_pred hcccCC-----------CCCCccceehhHHHHHHHHhC-CcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHH
Q 039817 615 EWLRNA-----------PVTAKVDVYSFGVMLLEIIFC-KRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERI 682 (725)
Q Consensus 615 E~~~~~-----------~~~~ksDv~S~G~vl~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 682 (725)
|.+-.. ..+++.||||+||++.||++. +++|+...--.... .+....+.+.+. .+...+
T Consensus 197 ERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~-~~~~~~e~~Le~--------Ied~~~ 267 (1431)
T KOG1240|consen 197 ERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRS-GNADDPEQLLEK--------IEDVSL 267 (1431)
T ss_pred HhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhc-cCccCHHHHHHh--------CcCccH
Confidence 987431 267889999999999999986 45554221111000 011111222211 223478
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 039817 683 TMVGLWCICPQPTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 683 ~~l~~~cl~~dp~~RPs~~evl~~L~~~ 710 (725)
+++++.|++.||.+|.++++.++--.++
T Consensus 268 Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 268 RNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred HHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 9999999999999999999999876554
No 415
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.70 E-value=1.3e-16 Score=169.02 Aligned_cols=256 Identities=19% Similarity=0.197 Sum_probs=184.5
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCc----CCccceeeEE-EcCCceeeeeecccC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHH----KNLVQLLGFC-IEQNHQLLVYELMKN 518 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H----~niv~l~g~~-~~~~~~~lV~e~~~~ 518 (725)
....|++|+.+.+...+ ...+|+|.-..........+..|+.++..+.+ +++..+++.. ..+...++||+.. +
T Consensus 27 G~G~fG~V~~v~~~~~~-~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G 104 (322)
T KOG1164|consen 27 GEGGFGAVYLVSDKSEK-NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-G 104 (322)
T ss_pred cccCCceEEEEEecCCC-CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-C
Confidence 34567888888876665 55677776654433333378899999998873 5888999888 4777899999988 4
Q ss_pred CChhhhhccC--CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcc--cc
Q 039817 519 GTLSAFLFRQ--EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAK--LL 594 (725)
Q Consensus 519 gsL~~~l~~~--~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~--~~ 594 (725)
.+|.+..... +.++..+...|+.|++.+|.+||+. +++||||||.|+++..... .....+.|.|||+++ .+
T Consensus 105 ~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~--~~~~~~~llDfGlar~~~~ 179 (322)
T KOG1164|consen 105 PSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSR--SEVRTLYLLDFGLARRFKY 179 (322)
T ss_pred ccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCC--cccceEEEEecCCCccccc
Confidence 5999987544 6789999999999999999999999 9999999999999986310 012579999999998 43
Q ss_pred CcCCC------cc-ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHH
Q 039817 595 KKDQT------RT-STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLY 667 (725)
Q Consensus 595 ~~~~~------~~-~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (725)
..... +. ....+||..|.+++...+...+.+.|+||++.++.|++.|..|+........ ..........
T Consensus 180 ~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~----~~~~~~~~~~ 255 (322)
T KOG1164|consen 180 VGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL----KSKFEKDPRK 255 (322)
T ss_pred cCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch----HHHHHHHhhh
Confidence 22221 11 1235699999999999999999999999999999999999988854432210 0111111111
Q ss_pred HHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 039817 668 CVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQMLEGTS 711 (725)
Q Consensus 668 ~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L~~~~ 711 (725)
... .......+..+.++...+-..+..++|....+...|+...
T Consensus 256 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~ 298 (322)
T KOG1164|consen 256 LLT-DRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF 298 (322)
T ss_pred hcc-ccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence 111 1012233455666666666689999999999999886653
No 416
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=6.3e-17 Score=162.88 Aligned_cols=200 Identities=21% Similarity=0.236 Sum_probs=146.2
Q ss_pred CcCCccceeeEEEc---------------------------CCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHH
Q 039817 492 HHKNLVQLLGFCIE---------------------------QNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIA 544 (725)
Q Consensus 492 ~H~niv~l~g~~~~---------------------------~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia 544 (725)
+|||||++.++|.+ +...|+||.-.+. +|.+++..+. .+.....-|+.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-RSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-CchHHHHHHHHHHH
Confidence 69999999987643 2356888887765 8998886554 45566777899999
Q ss_pred HHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcC-----CCccccccccCccccchhcccC
Q 039817 545 RGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKD-----QTRTSTMIRGTMGYMAPEWLRN 619 (725)
Q Consensus 545 ~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~ 619 (725)
+|+.|||++ +|.|||+|++|||+.-+. |+-....|+|||.+--.... ........-|...-||||....
T Consensus 352 Eav~hL~~h---gvAhRDlKSDNiL~Eldd---D~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 352 EAVTHLHKH---GVAHRDLKSDNILLELDD---DEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHc---cchhhcccccceEEEecC---CCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999 999999999999986542 44567789999987532221 1111122347778999998864
Q ss_pred CC------CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCC
Q 039817 620 AP------VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQ 693 (725)
Q Consensus 620 ~~------~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d 693 (725)
.+ --.|+|.|+.|.+.||++....||.... ++.+.....+..+-..++...+..+++++...++.|
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG--------em~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~ 497 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG--------EMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRD 497 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccc--------hheechhhhhhhhCCCCcccCChHHHHHHHHHhcCC
Confidence 32 2358999999999999998888887521 233332233333345566677889999999999999
Q ss_pred CCCCCCHHHHHHHh
Q 039817 694 PTLRPSMKQVLQML 707 (725)
Q Consensus 694 p~~RPs~~evl~~L 707 (725)
|.+|++..-....|
T Consensus 498 pskRvsp~iAANvl 511 (598)
T KOG4158|consen 498 PSKRVSPNIAANVL 511 (598)
T ss_pred ccccCCccHHHhHH
Confidence 99999886665554
No 417
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.63 E-value=1.4e-16 Score=167.59 Aligned_cols=168 Identities=29% Similarity=0.434 Sum_probs=130.0
Q ss_pred ceeeeeecccCCChhhhhccC---CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceE
Q 039817 508 HQLLVYELMKNGTLSAFLFRQ---EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITK 584 (725)
Q Consensus 508 ~~~lV~e~~~~gsL~~~l~~~---~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~k 584 (725)
..++.|+++...+|.+||.+. ...++....+++.|++.|+.| + +.+|+|+||.||+... +..+|
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~-------d~q~k 396 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSD-------DDQLK 396 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhcccccccccc-------chhhh
Confidence 578999999999999999765 356888999999999999999 5 8999999999999876 66899
Q ss_pred EeeccCccccCcCC-----CccccccccCccccchhcccCCCCCCccceehhHHHHHHHHh-CCcCCCCCCCCccccccC
Q 039817 585 IADFGLAKLLKKDQ-----TRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIF-CKRHTELHRVDEPTLANG 658 (725)
Q Consensus 585 l~Dfgla~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ellt-g~~~~~~~~~~~~~~~~~ 658 (725)
|.|||+........ ....+...||..||+||.+.+..|+.|+||||||++|+|++. -...++.
T Consensus 397 IgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er----------- 465 (516)
T KOG1033|consen 397 IGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER----------- 465 (516)
T ss_pred hhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-----------
Confidence 99999988765544 223344569999999999999999999999999999999995 2222221
Q ss_pred cchHHHHHHHHHcCCCChhH---HHHHHHHHHHccCCCCCCCCCHHHH
Q 039817 659 MILTDWVLYCVRTGNLGATK---FERITMVGLWCICPQPTLRPSMKQV 703 (725)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~---~~~l~~l~~~cl~~dp~~RPs~~ev 703 (725)
.-+...++.+.+++.. .+.-..|+.+++...|.+||++.++
T Consensus 466 ----~~t~~d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 466 ----IATLTDIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred ----HHhhhhhhcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 1122223344555321 2234568889999999999955444
No 418
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.62 E-value=3.8e-16 Score=167.40 Aligned_cols=196 Identities=22% Similarity=0.166 Sum_probs=164.0
Q ss_pred HHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCce
Q 039817 480 SFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQI 558 (725)
Q Consensus 480 ~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i 558 (725)
....|-.++..++ ||.+|++.-.+..+...+++.++..+|.|...+.+...+...........++-++.++|+. +|
T Consensus 42 ~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l---~i 118 (612)
T KOG0603|consen 42 HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL---GI 118 (612)
T ss_pred ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchh---HH
Confidence 4456777888886 9999999999999999999999999999999998888888888888889999999999999 99
Q ss_pred eecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHH
Q 039817 559 IHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEI 638 (725)
Q Consensus 559 vH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~el 638 (725)
+|||+|++||+++. +|.+|+.|||+++..-..... +||..|||||.+. ....++|.||||++++||
T Consensus 119 iyrd~k~enilld~-------~Ghi~~tdfglske~v~~~~~-----cgt~eymApEI~~--gh~~a~D~ws~gvl~fel 184 (612)
T KOG0603|consen 119 AYRDYKLENVLLLL-------EGHIKLTDFGLSKEAVKEKIA-----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFEL 184 (612)
T ss_pred HHhcccccceeecc-------cCccccCCchhhhHhHhhhhc-----ccchhhhhhHhhh--ccCCcccchhhhhhHHHH
Confidence 99999999999988 899999999999976544332 6899999999998 567899999999999999
Q ss_pred HhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCCCChhHHHHHHHHHHHccCCCCCCCCCH--HHHHHHh
Q 039817 639 IFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGNLGATKFERITMVGLWCICPQPTLRPSM--KQVLQML 707 (725)
Q Consensus 639 ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~--~evl~~L 707 (725)
++|..||.. +....... +..++.+.....++++..++..+|..|.-. ..+.+++
T Consensus 185 ltg~~pf~~---------------~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik 241 (612)
T KOG0603|consen 185 LTGTLPFGG---------------DTMKRILKAELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIK 241 (612)
T ss_pred hhCCCCCch---------------HHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHh
Confidence 999999875 11222222 345667778888889999999999999644 3444444
No 419
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.61 E-value=2.8e-15 Score=141.66 Aligned_cols=194 Identities=21% Similarity=0.223 Sum_probs=156.0
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCc-CCccceeeEEEcCCceeeeeecccCCChh
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHH-KNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
...+|++|+.|...-+|+. ||||.=.+. ..--++..|.+++..++| ..|..+..+..++..-.||||.+. .||+
T Consensus 24 GsGSFGdIy~~~~i~~ge~--VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLLG-PsLE 98 (341)
T KOG1163|consen 24 GSGSFGDIYLGISITSGEE--VAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLLG-PSLE 98 (341)
T ss_pred cCCchhheeeeeeccCCce--EEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeeccC-ccHH
Confidence 3468999999998877765 566643322 222357889999999976 568888888889999999999985 5898
Q ss_pred hhhc-cCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCc-
Q 039817 523 AFLF-RQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTR- 600 (725)
Q Consensus 523 ~~l~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~- 600 (725)
+.+. ..+.++.++++-++.|++.-++|+|.. +++||||||+|+|+.-+.. ...+.++|||+++.+....+.
T Consensus 99 dLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh----~~kl~LIDFGLaKky~d~~t~~ 171 (341)
T KOG1163|consen 99 DLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRH----CNKLYLIDFGLAKKYRDIRTRQ 171 (341)
T ss_pred HHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccc----cceEEEEeccchhhhccccccc
Confidence 8874 457899999999999999999999999 9999999999999876432 567899999999976543322
Q ss_pred -----cccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCC
Q 039817 601 -----TSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHR 649 (725)
Q Consensus 601 -----~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~ 649 (725)
......||..|.+-....+...+.+.|+-|+|.+|.+..-|..||..-.
T Consensus 172 HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 172 HIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred cCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 2223559999999888888888899999999999999999999998654
No 420
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.59 E-value=4.8e-15 Score=146.38 Aligned_cols=196 Identities=20% Similarity=0.232 Sum_probs=162.3
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
...+|++|+.+++...+ .+||||.=.. ....-+++.|.+.++.| ..+.|...+-|-.++.+-.||+|.+. .||+
T Consensus 37 GeGsFG~lf~G~Nl~nn--e~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLG-PSLE 111 (449)
T KOG1165|consen 37 GEGSFGVLFLGKNLYNN--EPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLG-PSLE 111 (449)
T ss_pred ccCcceeeecccccccC--ceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhC-cCHH
Confidence 45689999999998875 5778885432 23345688999999988 57899999999999999999999985 4999
Q ss_pred hhhcc-CCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCcc
Q 039817 523 AFLFR-QEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRT 601 (725)
Q Consensus 523 ~~l~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~ 601 (725)
|...- .+.++.+++.-+|.|++.-++|+|++ .+|.|||||+|+||.... -.....+.|+|||+|+.+....+..
T Consensus 112 DLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~--~k~~n~IhiiDFGmAK~YrDp~Tkq 186 (449)
T KOG1165|consen 112 DLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPG--TKDANVIHIIDFGMAKEYRDPKTKQ 186 (449)
T ss_pred HHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCC--CCCCceEEEEeccchhhhcCccccc
Confidence 98753 47899999999999999999999999 999999999999997522 2235678999999999876543322
Q ss_pred ------ccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCC
Q 039817 602 ------STMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHR 649 (725)
Q Consensus 602 ------~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~ 649 (725)
....-||..||+-....+.+.+.+-|+-|||-|+++.+-|..||..-.
T Consensus 187 HIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 187 HIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred cCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 223559999999999999999999999999999999999999998654
No 421
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.59 E-value=2.1e-15 Score=148.08 Aligned_cols=146 Identities=14% Similarity=0.152 Sum_probs=110.3
Q ss_pred ceEEEEEEcccccCccHHH---------HHHHHHHHhccCcCCccceeeEEEcC--------CceeeeeecccCCChhhh
Q 039817 462 EVEVAVKQLEKVTGDGEKS---------FLREVQVIGRTHHKNLVQLLGFCIEQ--------NHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~---------f~~E~~~l~~l~H~niv~l~g~~~~~--------~~~~lV~e~~~~gsL~~~ 524 (725)
...++||.+........+. +.+|++.+.+++|++|..+..++... ...+|||||+++.+|.++
T Consensus 54 ~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~ 133 (232)
T PRK10359 54 YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDM 133 (232)
T ss_pred CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHh
Confidence 3468999886543333322 67999999999999999999986633 357899999999999887
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
.. ++. ....+++.+|..+|+. +++|||+||+||+++. ++ ++|+|||.......+....
T Consensus 134 ~~----~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~-------~g-i~liDfg~~~~~~e~~a~d--- 191 (232)
T PRK10359 134 PE----ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSK-------NG-LRIIDLSGKRCTAQRKAKD--- 191 (232)
T ss_pred hh----ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeC-------CC-EEEEECCCcccccchhhHH---
Confidence 42 222 3466999999999999 9999999999999986 56 9999999887553222111
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHH
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEII 639 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~ell 639 (725)
.+.....+..++|+|+||+.+.-..
T Consensus 192 ----------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 192 ----------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ----------HHHHHhHhcccccccceeEeehHHH
Confidence 1334455678999999999887654
No 422
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity. Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
Probab=99.59 E-value=4.3e-15 Score=130.49 Aligned_cols=81 Identities=32% Similarity=0.506 Sum_probs=58.2
Q ss_pred CCeEEEEeCCCCCCC---CCceEEEcccccEEEEcCCCceEEEe-ccC----ceeEEEEecCCCeEEecCCC-----Ccc
Q 039817 72 ERTLVWSANRDDPAQ---VGSSINLTVTGQLVLTHSNGTQFKIY-NGT----LTVSALMQDSGNFLYSNANG-----SVD 138 (725)
Q Consensus 72 ~~tvVWvANr~~Pv~---~~s~l~l~~~G~LvL~~~~~~~~ws~-~~~----~~~~a~LldsGNlVl~~~~~-----~~d 138 (725)
++||||+|||+.|+. ...+|.|+.||+|+|.+.+++.+|++ +.. ....|+|+|+|||||++..+ ++|
T Consensus 1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~ 80 (114)
T PF01453_consen 1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFD 80 (114)
T ss_dssp ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTT
T ss_pred CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecC
Confidence 479999999999994 34689999999999999999999988 322 36789999999999999665 899
Q ss_pred CCCCceEEeeecCC
Q 039817 139 YSTGRFVLEIQMDG 152 (725)
Q Consensus 139 ~s~g~~~~~~~~~g 152 (725)
++++++.+.++...
T Consensus 81 ~ptdt~L~~q~l~~ 94 (114)
T PF01453_consen 81 YPTDTLLPGQKLGD 94 (114)
T ss_dssp SSS-EEEEEET--T
T ss_pred CCccEEEeccCccc
Confidence 99999999988443
No 423
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.57 E-value=7.1e-15 Score=141.08 Aligned_cols=180 Identities=14% Similarity=0.043 Sum_probs=127.1
Q ss_pred cccccHHHHHHHhcccCCcceEEEEEEcccccCcc----HHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeeccc
Q 039817 443 MKVFSYQELREATNVFDGQEVEVAVKQLEKVTGDG----EKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMK 517 (725)
Q Consensus 443 ~~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~----~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~ 517 (725)
+++-.|++++.+. +.+..++.+.+.....-. ...|.+|+++|++++ |+++++++++ +..+++|||++
T Consensus 10 l~~~~f~~v~~~~----~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~ 81 (218)
T PRK12274 10 LKSDTFGRILLVR----GGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA 81 (218)
T ss_pred ecCCCcceEEEee----cCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence 4555666666333 234566666665433211 125889999999995 5889999886 45699999999
Q ss_pred CCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCC-ccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 518 NGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDI-KPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 518 ~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~di-k~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
+.+|.+.+.. ....++.|++.+|.++|+. +|+|||| ||+|||++. ++.++|+|||++.....
T Consensus 82 G~~L~~~~~~-------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~-------~g~i~LIDFG~A~~~~~ 144 (218)
T PRK12274 82 GAAMYQRPPR-------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQE-------DGSPAVIDFQLAVRGNP 144 (218)
T ss_pred CccHHhhhhh-------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcC-------CCCEEEEECCCceecCC
Confidence 9998754421 1245788999999999999 9999999 799999976 77899999999986543
Q ss_pred CCCc----cc--------cccccCccccchhcccCC-CCC-CccceehhHHHHHHHHhCCcCCCC
Q 039817 597 DQTR----TS--------TMIRGTMGYMAPEWLRNA-PVT-AKVDVYSFGVMLLEIIFCKRHTEL 647 (725)
Q Consensus 597 ~~~~----~~--------~~~~gt~~y~aPE~~~~~-~~~-~ksDv~S~G~vl~elltg~~~~~~ 647 (725)
.... .. .....++.|++|+...-- ..+ ...+.++-|.-+|.++|++.+.-.
T Consensus 145 ~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 145 RARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 3210 00 012256677777643211 223 567889999999999999987643
No 424
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.57 E-value=3.1e-15 Score=145.18 Aligned_cols=136 Identities=17% Similarity=0.140 Sum_probs=101.1
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCc--c-------HHHH-----------------HHHHHHHhccCcCCcc
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGD--G-------EKSF-----------------LREVQVIGRTHHKNLV 497 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~--~-------~~~f-----------------~~E~~~l~~l~H~niv 497 (725)
...++++++.|.+. ++..||||.++..... . ...| ..|++.+.++.|+++.
T Consensus 6 g~G~~~~Vy~a~~~---~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 6 STGKEANVYHATTA---NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred ccccceEEEEEECC---CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 34567777777764 3567888887643211 1 1122 3499999999888775
Q ss_pred ceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhh-hcccCCceeecCCccceEEeccCccc
Q 039817 498 QLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYL-HEECETQIIHCDIKPQNVLLDNNYIT 576 (725)
Q Consensus 498 ~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yL-H~~~~~~ivH~dik~~NIll~~~~~~ 576 (725)
....+.. ...+|||||+++++|...+.....++......++.|++.+|.|| |+. +|+||||||+||+++.
T Consensus 83 ~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~~---- 153 (190)
T cd05147 83 CPEPILL--KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYHD---- 153 (190)
T ss_pred CCcEEEe--cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEEC----
Confidence 4333322 22389999999988776654556789999999999999999999 687 9999999999999973
Q ss_pred cCCCCceEEeeccCccccC
Q 039817 577 IDNNYITKIADFGLAKLLK 595 (725)
Q Consensus 577 ~~~~~~~kl~Dfgla~~~~ 595 (725)
+.++|+|||++....
T Consensus 154 ----~~v~LiDFG~a~~~~ 168 (190)
T cd05147 154 ----GKLYIIDVSQSVEHD 168 (190)
T ss_pred ----CcEEEEEccccccCC
Confidence 469999999997543
No 425
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.56 E-value=9.1e-15 Score=142.43 Aligned_cols=137 Identities=16% Similarity=0.082 Sum_probs=102.8
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCcc--------------------------HHHHHHHHHHHhccCcCCcc
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDG--------------------------EKSFLREVQVIGRTHHKNLV 497 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~--------------------------~~~f~~E~~~l~~l~H~niv 497 (725)
...+++.++.|++. ++..||||.+....... ...+..|.+.+.+++|+++.
T Consensus 6 g~G~~~~Vy~a~~~---~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 6 STGKEANVYHARTG---DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ecCCCcEEEEEEcC---CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34567777778765 35678888876432110 11245789999999999875
Q ss_pred ceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhc-ccCCceeecCCccceEEeccCccc
Q 039817 498 QLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHE-ECETQIIHCDIKPQNVLLDNNYIT 576 (725)
Q Consensus 498 ~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivH~dik~~NIll~~~~~~ 576 (725)
....+... ..+|||||++++++.........++......++.|++.++.+||+ . +|+||||||+||+++
T Consensus 83 ~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~----- 152 (190)
T cd05145 83 VPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH----- 152 (190)
T ss_pred CceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-----
Confidence 55444333 248999999988665443344567888999999999999999999 8 999999999999996
Q ss_pred cCCCCceEEeeccCccccCc
Q 039817 577 IDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 577 ~~~~~~~kl~Dfgla~~~~~ 596 (725)
++.++|+|||++....+
T Consensus 153 ---~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 ---DGKPYIIDVSQAVELDH 169 (190)
T ss_pred ---CCCEEEEEcccceecCC
Confidence 45799999999987654
No 426
>PRK10345 hypothetical protein; Provisional
Probab=99.51 E-value=9.1e-14 Score=136.19 Aligned_cols=118 Identities=19% Similarity=0.211 Sum_probs=91.1
Q ss_pred EEEEcccccCccHHHHHHHHHHHhcc-----CcCCccceeeEEEcCC---c-eeeeeec--ccCCChhhhhccCCCCCHH
Q 039817 466 AVKQLEKVTGDGEKSFLREVQVIGRT-----HHKNLVQLLGFCIEQN---H-QLLVYEL--MKNGTLSAFLFRQEIPTWD 534 (725)
Q Consensus 466 avk~l~~~~~~~~~~f~~E~~~l~~l-----~H~niv~l~g~~~~~~---~-~~lV~e~--~~~gsL~~~l~~~~~l~~~ 534 (725)
+||.+........+.+.+|+++++++ .||||++++|++.++. . ..+|+|| +++++|.+++.+. .+++.
T Consensus 28 ~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~e~ 106 (210)
T PRK10345 28 CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC-RYEED 106 (210)
T ss_pred EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc-cccHh
Confidence 46666544344567899999999999 5799999999998864 3 3378999 5589999999654 45544
Q ss_pred HHHHHHHHHHHHh-hhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcc
Q 039817 535 KRVEIALGIARGL-LYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAK 592 (725)
Q Consensus 535 ~~~~i~~qia~gL-~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~ 592 (725)
..++.|++.++ .|||+. +|+||||||+||+++... +++..++|+||+.+.
T Consensus 107 --~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~---~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 107 --VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRIS---ESEVIPVVCDNIGES 157 (210)
T ss_pred --HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccC---CCCCcEEEEECCCCc
Confidence 35678888777 999999 999999999999997521 125589999955443
No 427
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.48 E-value=4.2e-14 Score=143.11 Aligned_cols=224 Identities=19% Similarity=0.198 Sum_probs=135.4
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEccc-ccCccHHHHHHHHHHHhccC----------cCCccceeeEEEc--------
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEK-VTGDGEKSFLREVQVIGRTH----------HKNLVQLLGFCIE-------- 505 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~-~~~~~~~~f~~E~~~l~~l~----------H~niv~l~g~~~~-------- 505 (725)
..+++.++.+++..+++..+|++-.+.. ......+++++|.-.+..+. |-.++.-++....
T Consensus 22 ~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~~~~~ 101 (288)
T PF14531_consen 22 KGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKPPFFE 101 (288)
T ss_dssp EETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-SEEE
T ss_pred cCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCCccee
Confidence 3445555666666666554444444433 22334567777776665543 2233333333221
Q ss_pred -C---C-----ceeeeeecccCCChhhhhc---cC-C---CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEE
Q 039817 506 -Q---N-----HQLLVYELMKNGTLSAFLF---RQ-E---IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVL 569 (725)
Q Consensus 506 -~---~-----~~~lV~e~~~~gsL~~~l~---~~-~---~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIl 569 (725)
. . ..+++|+-+ .++|.+.+. .. . .+....+..+..|+++.+++||.. +++|+||+|+|++
T Consensus 102 ~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi~~~nfl 177 (288)
T PF14531_consen 102 RGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDIKPENFL 177 (288)
T ss_dssp ECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEE
T ss_pred cCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecccceeeEE
Confidence 1 1 225666666 358877753 21 1 234456677889999999999999 9999999999999
Q ss_pred eccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccC--------CCCCCccceehhHHHHHHHHhC
Q 039817 570 LDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRN--------APVTAKVDVYSFGVMLLEIIFC 641 (725)
Q Consensus 570 l~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ksDv~S~G~vl~elltg 641 (725)
++. +|.++|+||+.....+..... ...+..|.+||.... -.++.+.|.|++|+++|.|.++
T Consensus 178 l~~-------~G~v~Lg~F~~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 178 LDQ-------DGGVFLGDFSSLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp E-T-------TS-EEE--GGGEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred EcC-------CCCEEEcChHHHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 988 899999999887755432221 224577999997643 2578899999999999999999
Q ss_pred CcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCC
Q 039817 642 KRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLR 697 (725)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~R 697 (725)
+.|+.......... . .-..-. +.++.++.|+..+|+.+|.+|
T Consensus 247 ~lPf~~~~~~~~~~---~----------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEADPE---W----------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGSTSG---G----------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCcccccc---c----------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99998654332110 0 011222 678899999999999999988
No 428
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.47 E-value=4.5e-14 Score=139.45 Aligned_cols=204 Identities=19% Similarity=0.270 Sum_probs=141.6
Q ss_pred HHHHHhccCcCCccceeeEEEcC-----CceeeeeecccCCChhhhhccC----CCCCHHHHHHHHHHHHHHhhhhhccc
Q 039817 484 EVQVIGRTHHKNLVQLLGFCIEQ-----NHQLLVYELMKNGTLSAFLFRQ----EIPTWDKRVEIALGIARGLLYLHEEC 554 (725)
Q Consensus 484 E~~~l~~l~H~niv~l~g~~~~~-----~~~~lV~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~qia~gL~yLH~~~ 554 (725)
-...|-++.|.|||++..|..+. .+..++.|||.-|+|..+|.+. ..+......+|+.||..||.|||+ |
T Consensus 117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~ 195 (458)
T KOG1266|consen 117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-C 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-c
Confidence 34455667799999999988643 3578999999999999999754 467888889999999999999999 7
Q ss_pred CCceeecCCccceEEeccCccccCCCCceEEeeccCccccC---cCCCccccccccCccccchhcccCCCCCCccceehh
Q 039817 555 ETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLK---KDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631 (725)
Q Consensus 555 ~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~---~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~ 631 (725)
.|+|+|+++..+.|++.. ++.+|++--.-...-. .........-.+.++|.+||+-..-..+.++|||+|
T Consensus 196 ~PpiihgnlTc~tifiq~-------ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~f 268 (458)
T KOG1266|consen 196 DPPIIHGNLTCDTIFIQH-------NGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKF 268 (458)
T ss_pred CCccccCCcchhheeecC-------CceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhh
Confidence 889999999999999986 7778875322111100 000011112336789999998887788899999999
Q ss_pred HHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 632 GVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 632 G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
|+..+||.-+..-........ ..+.....-+ . .-...+-+.++.+|++.+|..||+|.+++.|.
T Consensus 269 gmcAlemailEiq~tnseS~~---~~ee~ia~~i-~--------~len~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 269 GMCALEMAILEIQSTNSESKV---EVEENIANVI-I--------GLENGLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred hHHHHHHHHheeccCCCccee---ehhhhhhhhe-e--------eccCccccCcCcccccCCCCCCcchhhhhcCc
Confidence 999999976554321111000 0000000000 0 00112234577789999999999999998775
No 429
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35 E-value=1.7e-12 Score=149.29 Aligned_cols=193 Identities=22% Similarity=0.173 Sum_probs=148.6
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccC---cCCccceeeEEEcCCceeeeeecccCCC
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTH---HKNLVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
...+|+.|+.|+..- +..||+|.=+.... -+|.-=.+++.||+ -+-|..+.....-.+..+||+||.+.|+
T Consensus 707 G~g~y~~vy~a~~~~---~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gt 780 (974)
T KOG1166|consen 707 GEGSYGSVYVATHSN---GKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGT 780 (974)
T ss_pred ccccceEEEEeecCC---CcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeecccccc
Confidence 456788888877654 67888887654332 23333344455555 2234444445556778899999999999
Q ss_pred hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC-C
Q 039817 521 LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ-T 599 (725)
Q Consensus 521 L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~-~ 599 (725)
|.+++...+..+|...+.++.|+++.+.+||.. +|||+||||+|+||......-.+...++|+|||.+.-+.--. .
T Consensus 781 lld~~N~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~ 857 (974)
T KOG1166|consen 781 LLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDG 857 (974)
T ss_pred HHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCC
Confidence 999999889999999999999999999999999 999999999999996544433446779999999986432211 1
Q ss_pred ccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCC
Q 039817 600 RTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHT 645 (725)
Q Consensus 600 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~ 645 (725)
......++|-++-.+|...+.+++-..|-|-|+.+++-|+.|+..-
T Consensus 858 ~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q 903 (974)
T KOG1166|consen 858 TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME 903 (974)
T ss_pred cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH
Confidence 2334466888999999999999999999999999999999988654
No 430
>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []. These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs
Probab=99.34 E-value=8.6e-13 Score=103.43 Aligned_cols=59 Identities=20% Similarity=0.329 Sum_probs=49.6
Q ss_pred CceEEEeecccCCCCCccccccccccChhhHHHHhcccCcccceeeec----ceeeccccccccc
Q 039817 304 DFTVEAIDDADIPNGDLRDMARITTTDVNECRKAVMDDCFCAAGVWRE----VVCLKKKMPLLNA 364 (725)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~nCsC~A~~~~~----~~C~~~~~~l~~~ 364 (725)
.++|++++++++|+... .....++++++|++.||+||||+||+|.+ ++|++|.++|+|+
T Consensus 4 ~d~F~~l~~~~~p~~~~--~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~~~~~C~lW~~~L~d~ 66 (66)
T PF08276_consen 4 GDGFLKLPNMKLPDFDN--AIVDSSVSLEECEKACLSNCSCTAYAYSNLSGGGGCLLWYGDLVDL 66 (66)
T ss_pred CCEEEEECCeeCCCCcc--eeeecCCCHHHHHhhcCCCCCEeeEEeeccCCCCEEEEEcCEeecC
Confidence 36999999999999752 12225689999999999999999999963 8999999999874
No 431
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.33 E-value=6.7e-12 Score=124.60 Aligned_cols=100 Identities=22% Similarity=0.383 Sum_probs=88.5
Q ss_pred HHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCce
Q 039817 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQI 558 (725)
Q Consensus 479 ~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i 558 (725)
..+.+|++++..++|+++.....++...+..++||||+++++|.+++..... .+..++.+++.+|.+||+. ++
T Consensus 44 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~---~i 116 (211)
T PRK14879 44 ERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSA---GI 116 (211)
T ss_pred HHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhC---Cc
Confidence 4578899999999999998888888888889999999999999999865432 8889999999999999999 99
Q ss_pred eecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 559 IHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 559 vH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
+|+|++|.||+++ ++.++|+|||++..
T Consensus 117 ~H~Dl~p~Nil~~--------~~~~~liDf~~a~~ 143 (211)
T PRK14879 117 IHGDLTTSNMILS--------GGKIYLIDFGLAEF 143 (211)
T ss_pred ccCCCCcccEEEE--------CCCEEEEECCcccC
Confidence 9999999999996 35689999999875
No 432
>smart00090 RIO RIO-like kinase.
Probab=99.31 E-value=8.9e-12 Score=125.23 Aligned_cols=135 Identities=19% Similarity=0.131 Sum_probs=99.1
Q ss_pred ccccHHHHHHHh-cccCCcceEEEEEEcccccCc------------------------cHHHHHHHHHHHhccCcC--Cc
Q 039817 444 KVFSYQELREAT-NVFDGQEVEVAVKQLEKVTGD------------------------GEKSFLREVQVIGRTHHK--NL 496 (725)
Q Consensus 444 ~~~~~~~l~~a~-~~~~~~~~~vavk~l~~~~~~------------------------~~~~f~~E~~~l~~l~H~--ni 496 (725)
...+++.++.|+ +..+ +..||||.+...... ....+..|++.+.++.|. .+
T Consensus 37 g~G~~g~Vy~a~~~~~~--g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~ 114 (237)
T smart00090 37 STGKEANVYHALDFDGS--GKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVPV 114 (237)
T ss_pred ccCcceeEEEEEecCCC--CcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 345667777776 3333 467888877542210 112356899999999753 33
Q ss_pred cceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCc-eeecCCccceEEeccCcc
Q 039817 497 VQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQ-IIHCDIKPQNVLLDNNYI 575 (725)
Q Consensus 497 v~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-ivH~dik~~NIll~~~~~ 575 (725)
.+++++ ...++||||+++.+|.........+.......++.|++.+|.+||+. + ++||||||+||+++
T Consensus 115 p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIli~---- 183 (237)
T smart00090 115 PKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNILVH---- 183 (237)
T ss_pred CeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEEEE----
Confidence 444443 23589999999999887765555566667789999999999999999 9 99999999999996
Q ss_pred ccCCCCceEEeeccCccccC
Q 039817 576 TIDNNYITKIADFGLAKLLK 595 (725)
Q Consensus 576 ~~~~~~~~kl~Dfgla~~~~ 595 (725)
++.++|+|||.+....
T Consensus 184 ----~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 184 ----DGKVVIIDVSQSVELD 199 (237)
T ss_pred ----CCCEEEEEChhhhccC
Confidence 3579999999987544
No 433
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.29 E-value=6.1e-13 Score=150.09 Aligned_cols=227 Identities=23% Similarity=0.270 Sum_probs=168.8
Q ss_pred eEEEEEEccccc--CccHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccCCChhhhh-ccCC-CCCHHHHH
Q 039817 463 VEVAVKQLEKVT--GDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFL-FRQE-IPTWDKRV 537 (725)
Q Consensus 463 ~~vavk~l~~~~--~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l-~~~~-~l~~~~~~ 537 (725)
..+|+|.+.... ....+....|..+-..+. |+|++++++...+.+..+++.||..++++.+.+ +... ..+....-
T Consensus 47 ~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~ 126 (601)
T KOG0590|consen 47 SSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSAS 126 (601)
T ss_pred ceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchh
Confidence 455666654332 222334445776666675 999999999999999999999999999999988 4443 56677788
Q ss_pred HHHHHHHHHhhhhh-cccCCceeecCCccceEEeccCccccCCCC-ceEEeeccCccccCc--CCCcccccccc-Ccccc
Q 039817 538 EIALGIARGLLYLH-EECETQIIHCDIKPQNVLLDNNYITIDNNY-ITKIADFGLAKLLKK--DQTRTSTMIRG-TMGYM 612 (725)
Q Consensus 538 ~i~~qia~gL~yLH-~~~~~~ivH~dik~~NIll~~~~~~~~~~~-~~kl~Dfgla~~~~~--~~~~~~~~~~g-t~~y~ 612 (725)
..+.|+..++.|+| .. ++.|+||||+|.+++. .+ ..|++|||+|..+.. ..........| ++.|+
T Consensus 127 ~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~-------s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~ 196 (601)
T KOG0590|consen 127 RYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDE-------SGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYG 196 (601)
T ss_pred hhhhhhccCccccCccc---ccccCCCCCccchhcc-------CCCcccCCCchhhccccccCCcceeeecccCCCCCCC
Confidence 89999999999999 77 9999999999999987 66 899999999987765 33333344568 99999
Q ss_pred chhcccCC-CCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHH-cCCCChhHHHHHHHHHHHcc
Q 039817 613 APEWLRNA-PVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVR-TGNLGATKFERITMVGLWCI 690 (725)
Q Consensus 613 aPE~~~~~-~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl 690 (725)
|||...+. ...+..|+||.|+++.-+++|..|++......... ..|...... .............++..+++
T Consensus 197 a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l 270 (601)
T KOG0590|consen 197 APEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY------SSWKSNKGRFTQLPWNSISDQAHDLLHKIL 270 (601)
T ss_pred CcccccchhhcCCCcccccccccccccccCCCCccccccccccc------eeecccccccccCccccCChhhhhcccccc
Confidence 99998874 55678999999999999999999998665443211 111111100 01112234556677888888
Q ss_pred CCCCCCCCCHHHHHH
Q 039817 691 CPQPTLRPSMKQVLQ 705 (725)
Q Consensus 691 ~~dp~~RPs~~evl~ 705 (725)
..+|..|.+.+++..
T Consensus 271 ~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 271 KENPSNRLSIEELKL 285 (601)
T ss_pred cCCchhccccccccc
Confidence 899999999887754
No 434
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.29 E-value=1.1e-11 Score=121.78 Aligned_cols=97 Identities=20% Similarity=0.335 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCce
Q 039817 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQI 558 (725)
Q Consensus 479 ~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i 558 (725)
..+.+|++++.+++|+++.....++...+..++||||+++++|.+++..... .++.+++.+|.+||+. ++
T Consensus 42 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~---gi 111 (199)
T TIGR03724 42 ERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKA---GI 111 (199)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHC---Ce
Confidence 5678899999999998876666666677778999999999999998754321 8899999999999999 99
Q ss_pred eecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 559 IHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 559 vH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
+|+|++|.||+++ ++.+++.|||++..
T Consensus 112 ~H~Dl~~~Nil~~--------~~~~~liDfg~a~~ 138 (199)
T TIGR03724 112 VHGDLTTSNIIVR--------DDKLYLIDFGLGKY 138 (199)
T ss_pred ecCCCCcceEEEE--------CCcEEEEECCCCcC
Confidence 9999999999996 45799999999875
No 435
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.27 E-value=2.1e-12 Score=145.60 Aligned_cols=138 Identities=22% Similarity=0.228 Sum_probs=106.6
Q ss_pred HHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCC--------------CccccccccCc
Q 039817 544 ARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQ--------------TRTSTMIRGTM 609 (725)
Q Consensus 544 a~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~--------------~~~~~~~~gt~ 609 (725)
+.+++|||+. +|+|||+||+|.+|+. -+.+|+.|||+.+...... ......++||+
T Consensus 153 vla~Eylh~y---givhrdlkpdnllIT~-------mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTP 222 (1205)
T KOG0606|consen 153 VLAVEYLHSY---GIVHRDLKPDNLLITS-------MGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTP 222 (1205)
T ss_pred hHHhHhhccC---CeecCCCCCCcceeee-------cccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCc
Confidence 8899999999 9999999999999987 8999999999987532110 01122357999
Q ss_pred cccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHc
Q 039817 610 GYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWC 689 (725)
Q Consensus 610 ~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 689 (725)
.|.|||++..+.|....|.|++|+++||.+-|..||.....++ .+...+.....-..-......+.++++...
T Consensus 223 eyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee-------lfg~visd~i~wpE~dea~p~Ea~dli~~L 295 (1205)
T KOG0606|consen 223 EYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-------LFGQVISDDIEWPEEDEALPPEAQDLIEQL 295 (1205)
T ss_pred cccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH-------HHhhhhhhhccccccCcCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999998765432 112222222222222445567888999999
Q ss_pred cCCCCCCCC
Q 039817 690 ICPQPTLRP 698 (725)
Q Consensus 690 l~~dp~~RP 698 (725)
|+.+|.+|-
T Consensus 296 L~qnp~~Rl 304 (1205)
T KOG0606|consen 296 LRQNPLCRL 304 (1205)
T ss_pred HHhChHhhc
Confidence 999999995
No 436
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.26 E-value=1.6e-11 Score=139.04 Aligned_cols=97 Identities=18% Similarity=0.284 Sum_probs=87.8
Q ss_pred HHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCce
Q 039817 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQI 558 (725)
Q Consensus 479 ~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i 558 (725)
+.+.+|++++++++|++++....++......++||||+++++|.+++. ....++.|++++|.|||+. ++
T Consensus 381 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~---gi 449 (535)
T PRK09605 381 ERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKA---GI 449 (535)
T ss_pred HHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhC---CC
Confidence 568899999999999999998888888888899999999999999884 4678999999999999999 99
Q ss_pred eecCCccceEEeccCccccCCCCceEEeeccCcccc
Q 039817 559 IHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL 594 (725)
Q Consensus 559 vH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~ 594 (725)
+||||||+||+++ ++.++|+|||+++..
T Consensus 450 iHrDlkp~NILl~--------~~~~~liDFGla~~~ 477 (535)
T PRK09605 450 VHGDLTTSNFIVR--------DDRLYLIDFGLGKYS 477 (535)
T ss_pred ccCCCChHHEEEE--------CCcEEEEeCcccccC
Confidence 9999999999993 568999999999753
No 437
>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.
Probab=99.25 E-value=9.9e-12 Score=103.59 Aligned_cols=72 Identities=22% Similarity=0.386 Sum_probs=59.8
Q ss_pred CceEEEeecccCCCCCccccccccccChhhHHHHhcccCcccceeee--cceeecccccccccccCCCCCcccceeeecc
Q 039817 304 DFTVEAIDDADIPNGDLRDMARITTTDVNECRKAVMDDCFCAAGVWR--EVVCLKKKMPLLNARRSNPSTNKMAAFIKVP 381 (725)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~nCsC~A~~~~--~~~C~~~~~~l~~~~~~~~~~~~~~~ylkv~ 381 (725)
.+.|+.++++++|+.. +.. ..+++++|++.|++||+|+||+|. ++.|++|..++.+.+... ..+..+|||+|
T Consensus 11 ~~~f~~~~~~~~~~~~---~~~-~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~C~~~~~~~~~~~~~~--~~~~~~yiKv~ 84 (84)
T cd01098 11 TDGFLKLPDVKLPDNA---SAI-TAISLEECREACLSNCSCTAYAYNNGSGGCLLWNGLLNNLRSLS--SGGGTLYLRLA 84 (84)
T ss_pred CCEEEEeCCeeCCCch---hhh-ccCCHHHHHHHHhcCCCcceeeecCCCCeEEEEeceecceEeec--CCCcEEEEEeC
Confidence 4689999999999775 333 678999999999999999999996 489999999998877654 33578999985
No 438
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.21 E-value=8.5e-11 Score=109.45 Aligned_cols=115 Identities=22% Similarity=0.235 Sum_probs=97.5
Q ss_pred eEEEEEEcccccCccHHHHHHHHHHHhccCc--CCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHH
Q 039817 463 VEVAVKQLEKVTGDGEKSFLREVQVIGRTHH--KNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540 (725)
Q Consensus 463 ~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~ 540 (725)
..+++|....... ...+.+|+..+..++| .++++++++...++..+++|||++++.+..+ +......++
T Consensus 22 ~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-------~~~~~~~~~ 92 (155)
T cd05120 22 EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV-------SEEEKEDIA 92 (155)
T ss_pred CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC-------CHHHHHHHH
Confidence 4678888755432 5679999999999976 5899999999888899999999998877654 567778899
Q ss_pred HHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 541 LGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 541 ~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
.+++++|.+||.....+++|+|++|+||+++. .+.+++.|||.++.
T Consensus 93 ~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~-------~~~~~l~Df~~~~~ 138 (155)
T cd05120 93 EQLAELLAKLHQLPLLVLCHGDLHPGNILVDD-------GKILGIIDWEYAGY 138 (155)
T ss_pred HHHHHHHHHHhCCCceEEEecCCCcceEEEEC-------CcEEEEEecccccC
Confidence 99999999999964457999999999999986 67899999999874
No 439
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.20 E-value=6.7e-11 Score=119.13 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHhccCcCCc--cceeeEEEcCC----ceeeeeecccC-CChhhhhccCCCCCHHHHHHHHHHHHHHhhhh
Q 039817 478 EKSFLREVQVIGRTHHKNL--VQLLGFCIEQN----HQLLVYELMKN-GTLSAFLFRQEIPTWDKRVEIALGIARGLLYL 550 (725)
Q Consensus 478 ~~~f~~E~~~l~~l~H~ni--v~l~g~~~~~~----~~~lV~e~~~~-gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yL 550 (725)
...+.+|++++.+++|+++ ++.+++..... ..++|+|++++ .+|.+++... .++.. .+.+++.+|.+|
T Consensus 84 ~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~~~----~~~~i~~~l~~l 158 (239)
T PRK01723 84 RTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA-PLSEE----QWQAIGQLIARF 158 (239)
T ss_pred hhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC-CCCHH----HHHHHHHHHHHH
Confidence 3568899999999998875 67777755432 23599999997 6999888543 34433 367899999999
Q ss_pred hcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcccc
Q 039817 551 HEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL 594 (725)
Q Consensus 551 H~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~ 594 (725)
|+. +|+|+||||.|||++. ++.++|+|||.+...
T Consensus 159 H~~---GI~HrDlkp~NILv~~-------~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 159 HDA---GVYHADLNAHNILLDP-------DGKFWLIDFDRGELR 192 (239)
T ss_pred HHC---CCCCCCCCchhEEEcC-------CCCEEEEECCCcccC
Confidence 999 9999999999999986 568999999998753
No 440
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.19 E-value=3.2e-11 Score=118.38 Aligned_cols=130 Identities=16% Similarity=0.117 Sum_probs=94.5
Q ss_pred ccccHHHHHHHhcccCCcceEEEEEEcccccC----------------------ccHHHHHHHHHHHhccCcCC--ccce
Q 039817 444 KVFSYQELREATNVFDGQEVEVAVKQLEKVTG----------------------DGEKSFLREVQVIGRTHHKN--LVQL 499 (725)
Q Consensus 444 ~~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~----------------------~~~~~f~~E~~~l~~l~H~n--iv~l 499 (725)
...++++++++... ++..|+||.+..... .....+..|..++.+++|++ +.+.
T Consensus 24 ~~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~ 100 (198)
T cd05144 24 GVGKESDVYLALDP---DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKP 100 (198)
T ss_pred ccCcceEEEEEEcC---CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCce
Confidence 34455666665542 356788886543210 01123678899999998874 4455
Q ss_pred eeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCC
Q 039817 500 LGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDN 579 (725)
Q Consensus 500 ~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~ 579 (725)
++. ...++||||+++++|.+.... .....++.+++.++.++|+. +++|+||||+||+++.
T Consensus 101 ~~~----~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~------- 160 (198)
T cd05144 101 IDW----NRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDD------- 160 (198)
T ss_pred eec----CCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcC-------
Confidence 442 455899999999999776431 34567889999999999998 9999999999999987
Q ss_pred CCceEEeeccCccccCc
Q 039817 580 NYITKIADFGLAKLLKK 596 (725)
Q Consensus 580 ~~~~kl~Dfgla~~~~~ 596 (725)
++.++|+|||++.....
T Consensus 161 ~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 161 DEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCcEEEEECCccccCCC
Confidence 78999999999975543
No 441
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.16 E-value=4.5e-10 Score=122.18 Aligned_cols=163 Identities=17% Similarity=0.230 Sum_probs=121.9
Q ss_pred ceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHH
Q 039817 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIAL 541 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~ 541 (725)
+.+|.|...+..++.......+-++.|+.++||||++++......+..|||+|-+. .|..++.+.. .....--+.
T Consensus 37 ~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~---~~~v~~Gl~ 111 (690)
T KOG1243|consen 37 GGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG---KEEVCLGLF 111 (690)
T ss_pred CCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH---HHHHHHHHH
Confidence 34666666655444445567888999999999999999999999999999999875 4666664433 445556689
Q ss_pred HHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCCC
Q 039817 542 GIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAP 621 (725)
Q Consensus 542 qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 621 (725)
||+.||.+||+.| +++|++|..+.|+|+. .|..||++|.++.....-.. ......--..|..|+.+....
T Consensus 112 qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~-------~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~ 181 (690)
T KOG1243|consen 112 QILAALSFLNDDC--NLVHGNVCKDSVFVNE-------SGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE 181 (690)
T ss_pred HHHHHHHHHhccC--CeeeccEeeeeEEEcC-------CCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc
Confidence 9999999999765 8999999999999988 89999999998865433221 111112223466776554322
Q ss_pred CCCccceehhHHHHHHHHhC
Q 039817 622 VTAKVDVYSFGVMLLEIIFC 641 (725)
Q Consensus 622 ~~~ksDv~S~G~vl~elltg 641 (725)
-..|.|-||++++|++.|
T Consensus 182 --~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 --WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred --cchhhhhHHHHHHHHhCc
Confidence 346999999999999988
No 442
>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins. Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
Probab=99.06 E-value=1.5e-10 Score=93.65 Aligned_cols=66 Identities=15% Similarity=0.139 Sum_probs=55.7
Q ss_pred ceEEEeecccCCCCCccccccccccChhhHHHHhcc---cCcccceeee--cceeecccccc-cccccCCCCCcccceee
Q 039817 305 FTVEAIDDADIPNGDLRDMARITTTDVNECRKAVMD---DCFCAAGVWR--EVVCLKKKMPL-LNARRSNPSTNKMAAFI 378 (725)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~---nCsC~A~~~~--~~~C~~~~~~l-~~~~~~~~~~~~~~~yl 378 (725)
..|+++.++++|+.. .++++||++.|++ ||||+||+|. +.+|++|.++| .+.++.. ..+.++|+
T Consensus 9 g~fl~~~~~klpd~~--------~~s~~eC~~~Cl~~~~nCsC~Aya~~~~~~gC~~W~~~l~~d~~~~~--~~g~~Ly~ 78 (80)
T cd00129 9 GTTLIKIALKIKTTK--------ANTADECANRCEKNGLPFSCKAFVFAKARKQCLWFPFNSMSGVRKEF--SHGFDLYE 78 (80)
T ss_pred CeEEEeecccCCccc--------ccCHHHHHHHHhcCCCCCCceeeeccCCCCCeEEecCcchhhHHhcc--CCCceeEe
Confidence 478999999998764 2689999999999 9999999994 46999999999 8887765 45678888
Q ss_pred ec
Q 039817 379 KV 380 (725)
Q Consensus 379 kv 380 (725)
|.
T Consensus 79 r~ 80 (80)
T cd00129 79 NK 80 (80)
T ss_pred EC
Confidence 73
No 443
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.04 E-value=2.9e-10 Score=110.45 Aligned_cols=133 Identities=18% Similarity=0.162 Sum_probs=87.8
Q ss_pred cccHHHHHHHhcccCCcceEEEEEEcccccCc--cHHHH----------------------HHHHHHHhccCcCC--ccc
Q 039817 445 VFSYQELREATNVFDGQEVEVAVKQLEKVTGD--GEKSF----------------------LREVQVIGRTHHKN--LVQ 498 (725)
Q Consensus 445 ~~~~~~l~~a~~~~~~~~~~vavk~l~~~~~~--~~~~f----------------------~~E~~~l~~l~H~n--iv~ 498 (725)
..+++.++.|.+. .+..||||.+...... ....+ ..|.+.+.++++.. +.+
T Consensus 7 ~G~~g~Vy~a~~~---~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~ 83 (187)
T cd05119 7 TGKEADVYLALDG---DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPK 83 (187)
T ss_pred cccceeEEEEECC---CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCc
Confidence 4456667777654 3467899987542211 11111 35566666664432 444
Q ss_pred eeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhc-ccCCceeecCCccceEEeccCcccc
Q 039817 499 LLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHE-ECETQIIHCDIKPQNVLLDNNYITI 577 (725)
Q Consensus 499 l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~-~~~~~ivH~dik~~NIll~~~~~~~ 577 (725)
.++. ...++||||++++.+........... .....++.+++.++.++|. . +|+|+||||+||+++
T Consensus 84 ~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~------ 149 (187)
T cd05119 84 PIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD------ 149 (187)
T ss_pred eEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE------
Confidence 4443 24689999999955432211111111 6678899999999999999 7 999999999999997
Q ss_pred CCCCceEEeeccCccccCc
Q 039817 578 DNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 578 ~~~~~~kl~Dfgla~~~~~ 596 (725)
++.++|+|||.+.....
T Consensus 150 --~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 --DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred --CCcEEEEECcccccccC
Confidence 45799999999975543
No 444
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.04 E-value=2.4e-10 Score=123.36 Aligned_cols=240 Identities=18% Similarity=0.152 Sum_probs=169.9
Q ss_pred ccHHHHHHHhcccCCcceEEEEEEc--ccccCccHHHHHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 446 FSYQELREATNVFDGQEVEVAVKQL--EKVTGDGEKSFLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 446 ~~~~~l~~a~~~~~~~~~~vavk~l--~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
..+++++.+...-..+...+|+|+- .....+....=.+|+...+++ .|+|.++.....+..+..++-.|++. .+|.
T Consensus 127 g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~ 205 (524)
T KOG0601|consen 127 GSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCG-ESLQ 205 (524)
T ss_pred CCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeecccc-chhH
Confidence 3455555555533444556677762 222233333445677777777 49999999899999999999999987 5888
Q ss_pred hhhccCC-CCCHHHHHHHHHHHHH----HhhhhhcccCCceeecCCccceEEeccCccccCCC-CceEEeeccCccccCc
Q 039817 523 AFLFRQE-IPTWDKRVEIALGIAR----GLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNN-YITKIADFGLAKLLKK 596 (725)
Q Consensus 523 ~~l~~~~-~l~~~~~~~i~~qia~----gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~-~~~kl~Dfgla~~~~~ 596 (725)
.+.+... .++....+....+..+ ||.++|.. .++|-|+||.||++.. + ...+++|||+...+..
T Consensus 206 ~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~-------~~~s~~~~df~~v~~i~~ 275 (524)
T KOG0601|consen 206 SYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTS-------DWTSCKLTDFGLVSKISD 275 (524)
T ss_pred HhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheeccc-------ccceeecCCcceeEEccC
Confidence 8877664 4777888888888888 99999999 9999999999999977 5 7889999999987765
Q ss_pred CCCccc----cccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC
Q 039817 597 DQTRTS----TMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG 672 (725)
Q Consensus 597 ~~~~~~----~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 672 (725)
...... ....|...|++||... +.++.++|+|++|.++.+..++................+..+ ..
T Consensus 276 ~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i---------p~ 345 (524)
T KOG0601|consen 276 GNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI---------PL 345 (524)
T ss_pred CccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC---------ch
Confidence 542211 1235777899999775 457899999999999999998887765543332211111110 11
Q ss_pred CCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 039817 673 NLGATKFERITMVGLWCICPQPTLRPSMKQVLQM 706 (725)
Q Consensus 673 ~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~ 706 (725)
.+-.....++...+..+++.+|..|++.+.+..+
T Consensus 346 e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 346 EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 1111223455568889999999999998776643
No 445
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.85 E-value=2.7e-08 Score=105.14 Aligned_cols=210 Identities=16% Similarity=0.198 Sum_probs=145.7
Q ss_pred HHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCCccceeeEEE----cCCceeeeeecccC-CChhhhhc
Q 039817 452 REATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLVQLLGFCI----EQNHQLLVYELMKN-GTLSAFLF 526 (725)
Q Consensus 452 ~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~----~~~~~~lV~e~~~~-gsL~~~l~ 526 (725)
++++...+| -.+.+|++.....+.......-++.++++.|.|+|++..++. .+..+++||+|.++ ++|.++.+
T Consensus 293 yk~~s~~DG--~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F 370 (655)
T KOG3741|consen 293 YKATSNVDG--NAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYF 370 (655)
T ss_pred EeeeeccCC--ceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHc
Confidence 444545544 467888885443344434556788999999999999999887 34578999999986 68877765
Q ss_pred cC---------------CCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCc
Q 039817 527 RQ---------------EIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLA 591 (725)
Q Consensus 527 ~~---------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla 591 (725)
.. ...++..+|.++.|+..||.++|+. ++.-+-|.+.+|+++. +.+++|+..|..
T Consensus 371 ~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G-------~~RIriS~C~i~ 440 (655)
T KOG3741|consen 371 ANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTG-------KMRIRISGCGIM 440 (655)
T ss_pred cCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeC-------cceEEEecccce
Confidence 32 2346789999999999999999999 9999999999999976 668889888887
Q ss_pred cccCcCCCccccccccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHc
Q 039817 592 KLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRT 671 (725)
Q Consensus 592 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (725)
.....+.... +.+ ..+-|.=.||.+++.|.+|...-...... .+.. .
T Consensus 441 Dvl~~d~~~~---------------le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~----------~~s~-----~ 487 (655)
T KOG3741|consen 441 DVLQEDPTEP---------------LES---QQQNDLRDLGLLLLALATGTENSNRTDST----------QSSH-----L 487 (655)
T ss_pred eeecCCCCcc---------------hhH---HhhhhHHHHHHHHHHHhhcccccccccch----------HHHH-----H
Confidence 7665544111 111 23567888999999999987543211110 0000 0
Q ss_pred CCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 672 GNLGATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 672 ~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
..+......++++++.-....++++ -++.+++.++
T Consensus 488 ~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 488 TRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 1122244566677777777777776 5666666554
No 446
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.76 E-value=1.5e-08 Score=111.17 Aligned_cols=103 Identities=19% Similarity=0.200 Sum_probs=72.1
Q ss_pred HHHHHHHHhccC----cCCccceeeEEE-cCCceeeeeecccCCChhhhhccC-CCCCHHHHHHHHHHHHH-Hhhhhhcc
Q 039817 481 FLREVQVIGRTH----HKNLVQLLGFCI-EQNHQLLVYELMKNGTLSAFLFRQ-EIPTWDKRVEIALGIAR-GLLYLHEE 553 (725)
Q Consensus 481 f~~E~~~l~~l~----H~niv~l~g~~~-~~~~~~lV~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~qia~-gL~yLH~~ 553 (725)
|.+|++.+.+++ |.+-+.+-..+. .....+|||||+++++|.+..... ... .+.+++.+++. .+..+|..
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 200 LRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhC
Confidence 455666555542 333333333332 244679999999999998876432 112 24556666666 46788888
Q ss_pred cCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 554 CETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 554 ~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
+++|+|+||.||+++. ++.+++.|||++..+..
T Consensus 277 ---g~~H~D~hPgNilv~~-------~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 277 ---GFFHADLHPGNIFVLK-------DGKIIALDFGIVGRLSE 309 (437)
T ss_pred ---CceeCCCCcccEEECC-------CCcEEEEeCCCeeECCH
Confidence 9999999999999977 78899999999987653
No 447
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.70 E-value=4.8e-08 Score=93.13 Aligned_cols=113 Identities=20% Similarity=0.103 Sum_probs=80.5
Q ss_pred ceEEEEEEcccccCccHHHHHHHHHHHhccCcCCcc-ceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHH
Q 039817 462 EVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNLV-QLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIA 540 (725)
Q Consensus 462 ~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~ 540 (725)
+..+++|....... ....+..|+++++.+.+.+++ +++.+. ....++||||+++.++.+.. .....++
T Consensus 21 ~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~~~--------~~~~~~~ 89 (170)
T cd05151 21 NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLTED--------FSDPENL 89 (170)
T ss_pred CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccccc--------ccCHHHH
Confidence 45688888654321 234578899999998765544 555543 23457999999998876531 1123457
Q ss_pred HHHHHHhhhhhccc--CCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 541 LGIARGLLYLHEEC--ETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 541 ~qia~gL~yLH~~~--~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
.+++++|+.||... ...++|+|++|.||+++. +.++++||+.+..
T Consensus 90 ~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~--------~~~~liDf~~a~~ 136 (170)
T cd05151 90 EKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDD--------GRLWLIDWEYAGM 136 (170)
T ss_pred HHHHHHHHHHhCCCCCCceeecCCCCcCcEEEEC--------CeEEEEecccccC
Confidence 88999999999982 223699999999999973 3689999998763
No 448
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.69 E-value=6.8e-08 Score=93.06 Aligned_cols=100 Identities=12% Similarity=0.138 Sum_probs=76.0
Q ss_pred HHHHHHHhccCc--CCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhh-hcccCCce
Q 039817 482 LREVQVIGRTHH--KNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYL-HEECETQI 558 (725)
Q Consensus 482 ~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yL-H~~~~~~i 558 (725)
.+|++.|+++.. -++.+++++ ..-+|||||+.+..+..-..+...++.....++..+++.+|..| |+. ++
T Consensus 74 ~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~---gl 146 (197)
T cd05146 74 EKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC---NL 146 (197)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 389999999853 466677764 56789999998754432222223345556778889999999999 787 99
Q ss_pred eecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 559 IHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 559 vH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
+|+||++.||+++ ++.+.|+|||.+....+
T Consensus 147 VHGDLs~~NIL~~--------~~~v~iIDF~qav~~~h 176 (197)
T cd05146 147 VHADLSEYNMLWH--------DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred ecCCCCHHHEEEE--------CCcEEEEECCCceeCCC
Confidence 9999999999996 35699999999876543
No 449
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.69 E-value=2e-08 Score=108.60 Aligned_cols=225 Identities=22% Similarity=0.223 Sum_probs=156.2
Q ss_pred cceEEEEEEcccccCccHHH--HHHHHHHHhcc-CcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHH
Q 039817 461 QEVEVAVKQLEKVTGDGEKS--FLREVQVIGRT-HHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRV 537 (725)
Q Consensus 461 ~~~~vavk~l~~~~~~~~~~--f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~ 537 (725)
.+..+++|.+.+.......+ -+.|+-+...+ .|.+.++....+......++=-||++++++...+.-...++...++
T Consensus 290 ~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~ 369 (524)
T KOG0601|consen 290 GDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRL 369 (524)
T ss_pred CCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhh
Confidence 34566777665432222222 24566666665 5888998888888888888999999999998888555677889999
Q ss_pred HHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccc-cchhc
Q 039817 538 EIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGY-MAPEW 616 (725)
Q Consensus 538 ~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y-~aPE~ 616 (725)
++..|++.++.++|+. .++|+|+||+||++..+ .+.-+++|||....+.-.. ......+..| .+++.
T Consensus 370 ~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~------~~~~~~~~~~~~t~~~~~~---~~~~~~~r~~p~~~~~ 437 (524)
T KOG0601|consen 370 RLTAQILTALNVIHSK---LFVHLDVKPSNILISND------GFFSKLGDFGCWTRLAFSS---GVFHHIDRLYPIAEIL 437 (524)
T ss_pred hhHHHHHhccccccch---hhhcccccccceeeccc------hhhhhccccccccccceec---ccccccccccccchhh
Confidence 9999999999999998 99999999999999762 2778999999886421111 1111122334 35556
Q ss_pred ccCCCCCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCC
Q 039817 617 LRNAPVTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTL 696 (725)
Q Consensus 617 ~~~~~~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~ 696 (725)
.....+..+.|++|||.-+.|.+++....+.......... + .....+... ..+..+...++.+++..
T Consensus 438 ~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~~-~-----------~~p~~~~~~-~~~q~~~kv~~~~~~~~ 504 (524)
T KOG0601|consen 438 LEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIRS-G-----------DTPNLPGLK-LQLQVLLKVMINPDRKR 504 (524)
T ss_pred ccccccccccccccccccccccccCcccCcccccceeeec-c-----------cccCCCchH-HhhhhhhhhhcCCcccc
Confidence 6677889999999999999999988865543221110000 0 001122222 56667777889999999
Q ss_pred CCCHHHHHHHhcCC
Q 039817 697 RPSMKQVLQMLEGT 710 (725)
Q Consensus 697 RPs~~evl~~L~~~ 710 (725)
||.+.++..+.+-.
T Consensus 505 ~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 505 RPSAVELSLHSEFY 518 (524)
T ss_pred chhhhhhcccchhh
Confidence 99998888776544
No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.64 E-value=1.1e-08 Score=116.24 Aligned_cols=188 Identities=19% Similarity=0.191 Sum_probs=139.3
Q ss_pred CcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEec
Q 039817 492 HHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLD 571 (725)
Q Consensus 492 ~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~ 571 (725)
+||-+++..--+.......||++|..+++|...|+.....+..-....+..+..+++|||.. .+.|+|++|.|++..
T Consensus 862 ~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~ 938 (1205)
T KOG0606|consen 862 RSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIA 938 (1205)
T ss_pred CCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccc---hhhcccccccchhhc
Confidence 34545544434445667899999999999999998877666666666777888999999997 799999999999987
Q ss_pred cCccccCCCCceEEeeccCccccC---------------------cCC---------CccccccccCccccchhcccCCC
Q 039817 572 NNYITIDNNYITKIADFGLAKLLK---------------------KDQ---------TRTSTMIRGTMGYMAPEWLRNAP 621 (725)
Q Consensus 572 ~~~~~~~~~~~~kl~Dfgla~~~~---------------------~~~---------~~~~~~~~gt~~y~aPE~~~~~~ 621 (725)
. ++..++.||+...... ... ........+|..|.+||...+..
T Consensus 939 ~-------~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~ 1011 (1205)
T KOG0606|consen 939 Y-------DGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRR 1011 (1205)
T ss_pred c-------cCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccccc
Confidence 7 7888999997432211 000 01112345899999999999999
Q ss_pred CCCccceehhHHHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcC-----CCChhHHHHHHHHHHHccCCCCCC
Q 039817 622 VTAKVDVYSFGVMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTG-----NLGATKFERITMVGLWCICPQPTL 696 (725)
Q Consensus 622 ~~~ksDv~S~G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dp~~ 696 (725)
....+|.|+.|++++|.++|..|+....... +.+-+..+ ..+.+...+..+++...+..+|.+
T Consensus 1012 hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~------------~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~q 1079 (1205)
T KOG0606|consen 1012 HGSAADWWSSGVCLFEVLTGIPPFNAETPQQ------------IFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQ 1079 (1205)
T ss_pred CCCcchhhhhhhhhhhhhcCCCCCCCcchhh------------hhhccccCCCCCCCCccccChhhhhhhhhhhccCchh
Confidence 9999999999999999999999997654322 11111122 223356677888888899999999
Q ss_pred CCCHH
Q 039817 697 RPSMK 701 (725)
Q Consensus 697 RPs~~ 701 (725)
|..|.
T Consensus 1080 r~~a~ 1084 (1205)
T KOG0606|consen 1080 RLGAK 1084 (1205)
T ss_pred ccCcc
Confidence 98776
No 451
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.57 E-value=2.3e-07 Score=86.25 Aligned_cols=97 Identities=21% Similarity=0.360 Sum_probs=79.6
Q ss_pred HHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCce
Q 039817 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQI 558 (725)
Q Consensus 479 ~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i 558 (725)
+.-.+|++++.+++--.|...+=+..+.+...|+|||.++..|.+.+... +..++..+-+-+.-||.. +|
T Consensus 44 ~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~---gi 113 (204)
T COG3642 44 ERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKA---GI 113 (204)
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhc---Ce
Confidence 34678999999987665555555666777888999999999999998655 356777777788889999 99
Q ss_pred eecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 559 IHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 559 vH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
+|+||.++||++.. ..+.++||||+..
T Consensus 114 vHGDLTtsNiIl~~--------~~i~~IDfGLg~~ 140 (204)
T COG3642 114 VHGDLTTSNIILSG--------GRIYFIDFGLGEF 140 (204)
T ss_pred ecCCCccceEEEeC--------CcEEEEECCcccc
Confidence 99999999999974 3499999999874
No 452
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.54 E-value=5.6e-07 Score=91.75 Aligned_cols=111 Identities=16% Similarity=0.150 Sum_probs=84.6
Q ss_pred HHHHHHHHHhccCcCC--ccceeeEEEc-----CCceeeeeecccCC-Chhhhhcc--CCCCCHHHHHHHHHHHHHHhhh
Q 039817 480 SFLREVQVIGRTHHKN--LVQLLGFCIE-----QNHQLLVYELMKNG-TLSAFLFR--QEIPTWDKRVEIALGIARGLLY 549 (725)
Q Consensus 480 ~f~~E~~~l~~l~H~n--iv~l~g~~~~-----~~~~~lV~e~~~~g-sL~~~l~~--~~~l~~~~~~~i~~qia~gL~y 549 (725)
.+.+|.+.+.+++..+ .++++++.+. ....+||+|++++. +|.+++.. ....+...+..++.+++..+.-
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~ 153 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD 153 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 4789999999885444 4455666653 23578999999986 89999853 2445667788999999999999
Q ss_pred hhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 550 LHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 550 LH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
||.. +|+|+|++++|||++.+....++...+.++||+.+..
T Consensus 154 LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 154 MHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHC---cCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 9999 9999999999999975210012357899999998863
No 453
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.49 E-value=4.5e-08 Score=107.35 Aligned_cols=152 Identities=18% Similarity=0.263 Sum_probs=103.9
Q ss_pred HHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCC-------cc-ccccccCcc
Q 039817 539 IALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQT-------RT-STMIRGTMG 610 (725)
Q Consensus 539 i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~-------~~-~~~~~gt~~ 610 (725)
=+.+++.||.|+|.. ..+||++|.|++|.++. .+..||++|+.+........ .. .........
T Consensus 104 nl~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na-------~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~ 174 (700)
T KOG2137|consen 104 NLGNVADGLAFLHRS--AKVVHGNIQPEAIVVNA-------NGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLN 174 (700)
T ss_pred hhhcccchhhhhccC--cceeecccchhheeecc-------CcceeeccchhhhccCCCCccccccCCCCCChhhccCcc
Confidence 345667999999987 58999999999999987 88999999998765433111 00 111235568
Q ss_pred ccchhcccCCCCCCccceehhHHHHHHHH-hCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHc
Q 039817 611 YMAPEWLRNAPVTAKVDVYSFGVMLLEII-FCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWC 689 (725)
Q Consensus 611 y~aPE~~~~~~~~~ksDv~S~G~vl~ell-tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 689 (725)
|.|||++.+...+.++|+||+|++++-+. .|+..+.......... ...... ......+....+.++++=+.++
T Consensus 175 f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~-----~~~~~~-~~~~~~~s~~~p~el~~~l~k~ 248 (700)
T KOG2137|consen 175 FLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS-----FSRNLL-NAGAFGYSNNLPSELRESLKKL 248 (700)
T ss_pred cccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhh-----hhhccc-ccccccccccCcHHHHHHHHHH
Confidence 99999999988899999999999999999 4444443322111000 000000 0001122345667778888889
Q ss_pred cCCCCCCCCCHHHHHH
Q 039817 690 ICPQPTLRPSMKQVLQ 705 (725)
Q Consensus 690 l~~dp~~RPs~~evl~ 705 (725)
+..++..||++.++..
T Consensus 249 l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 249 LNGDSAVRPTLDLLLS 264 (700)
T ss_pred hcCCcccCcchhhhhc
Confidence 9999999998877654
No 454
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.38 E-value=1.2e-06 Score=80.99 Aligned_cols=109 Identities=22% Similarity=0.326 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccC-CChhhhhccCC-CCCHHHH-HHHHHHHHHHhhhhhccc
Q 039817 478 EKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKN-GTLSAFLFRQE-IPTWDKR-VEIALGIARGLLYLHEEC 554 (725)
Q Consensus 478 ~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~-gsL~~~l~~~~-~l~~~~~-~~i~~qia~gL~yLH~~~ 554 (725)
.+..++|++.+.+++--.|.-..=++.+...-.|+|||+++ .++.+++.... ....+.. ..++.++-+.+.-||..
T Consensus 54 r~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n- 132 (229)
T KOG3087|consen 54 RKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN- 132 (229)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC-
Confidence 45678999999988755554444456666667799999987 57888886652 2233333 78889999999999999
Q ss_pred CCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 555 ETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 555 ~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
.|+|+||..+||+|..+. ....+.++|||++..
T Consensus 133 --diiHGDLTTSNill~~~~----~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 133 --DIIHGDLTTSNILLRSDG----NQITPILIDFGLSSV 165 (229)
T ss_pred --CeecccccccceEEecCC----CcCceEEEeecchhc
Confidence 999999999999997742 255668999999864
No 455
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.38 E-value=2.1e-06 Score=85.66 Aligned_cols=125 Identities=20% Similarity=0.275 Sum_probs=92.9
Q ss_pred eEEEEEEcccccC-ccHHHHHHHHHHHhccCc--CCccceeeEEEcCC---ceeeeeecccCCChhhhhccCCCCCHHHH
Q 039817 463 VEVAVKQLEKVTG-DGEKSFLREVQVIGRTHH--KNLVQLLGFCIEQN---HQLLVYELMKNGTLSAFLFRQEIPTWDKR 536 (725)
Q Consensus 463 ~~vavk~l~~~~~-~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~---~~~lV~e~~~~gsL~~~l~~~~~l~~~~~ 536 (725)
..+++|....... .....+..|+++++.+++ .++.+++.+..... ..++||||+++.++.+.+.. ..++...+
T Consensus 23 ~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~-~~~~~~~~ 101 (223)
T cd05154 23 RRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR-PELSPEER 101 (223)
T ss_pred cceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC-CCCCHHHH
Confidence 4677887654322 135678999999999975 44677888877643 66899999999988876642 45677788
Q ss_pred HHHHHHHHHHhhhhhccc-----------------------------------------------------CCceeecCC
Q 039817 537 VEIALGIARGLLYLHEEC-----------------------------------------------------ETQIIHCDI 563 (725)
Q Consensus 537 ~~i~~qia~gL~yLH~~~-----------------------------------------------------~~~ivH~di 563 (725)
..++.+++++|.+||+.. ...++|+|+
T Consensus 102 ~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~ 181 (223)
T cd05154 102 RALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDY 181 (223)
T ss_pred HHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCC
Confidence 888888888888888521 246799999
Q ss_pred ccceEEeccCccccCCCCceEEeeccCccc
Q 039817 564 KPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 564 k~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
++.||+++.+ ++..+.|+||+.+..
T Consensus 182 ~~~Nil~~~~-----~~~~~~iID~e~~~~ 206 (223)
T cd05154 182 RLGNVLFHPD-----EPRVVAVLDWELATL 206 (223)
T ss_pred CcccEEEcCC-----CCcEEEEEecccccc
Confidence 9999999762 134578999998764
No 456
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.31 E-value=4.1e-07 Score=101.13 Aligned_cols=103 Identities=16% Similarity=0.201 Sum_probs=63.5
Q ss_pred HHHHHHHHhccC----cCCccceeeEEEc-CCceeeeeecccCCChhhhh--ccCC----CCCHHHHHHHHHHHHHHhhh
Q 039817 481 FLREVQVIGRTH----HKNLVQLLGFCIE-QNHQLLVYELMKNGTLSAFL--FRQE----IPTWDKRVEIALGIARGLLY 549 (725)
Q Consensus 481 f~~E~~~l~~l~----H~niv~l~g~~~~-~~~~~lV~e~~~~gsL~~~l--~~~~----~l~~~~~~~i~~qia~gL~y 549 (725)
|.+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+.|.+.- ...+ .+.......++.|+
T Consensus 203 ~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi------ 276 (537)
T PRK04750 203 LMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV------ 276 (537)
T ss_pred HHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH------
Confidence 445555555543 4444444344332 45678999999999998752 2222 12222233333443
Q ss_pred hhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 550 LHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 550 LH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
+.. +++|+|+||.||+++.+. ...+.+++.|||+...+..
T Consensus 277 -f~~---GffHaDpHPGNIlv~~~g---~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 -FRD---GFFHADMHPGNIFVSYDP---PENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -HhC---CeeeCCCChHHeEEecCC---CCCCeEEEEecceEEECCH
Confidence 334 999999999999998721 0124899999999987644
No 457
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.24 E-value=4.2e-06 Score=82.47 Aligned_cols=110 Identities=21% Similarity=0.276 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHhccCc--CCccceeeEEEcCC----ceeeeeecccC-CChhhhhccCCCCCHHHHHHHHHHHHHHhhhh
Q 039817 478 EKSFLREVQVIGRTHH--KNLVQLLGFCIEQN----HQLLVYELMKN-GTLSAFLFRQEIPTWDKRVEIALGIARGLLYL 550 (725)
Q Consensus 478 ~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~----~~~lV~e~~~~-gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yL 550 (725)
.....+|.+.+.+++. -...+.+++..... ..+||+|++++ .+|.+++......+......++.++++.+.-|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 4467889888888853 44567777776532 45899999998 48999997755577778899999999999999
Q ss_pred hcccCCceeecCCccceEEeccCccccCCCCceEEeeccCcccc
Q 039817 551 HEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL 594 (725)
Q Consensus 551 H~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~ 594 (725)
|+. +|+|+|+++.|||++.+. +...+.++||+.++..
T Consensus 135 H~~---gi~H~Dl~~~NILv~~~~----~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 135 HDA---GIYHGDLNPSNILVDPDD----GQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHC---cCCCCCCCcccEEEeCCC----CceeEEEEcchhceeC
Confidence 999 999999999999998732 2458999999987753
No 458
>smart00473 PAN_AP divergent subfamily of APPLE domains. Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.
Probab=98.17 E-value=3.5e-06 Score=68.70 Aligned_cols=58 Identities=19% Similarity=0.363 Sum_probs=46.4
Q ss_pred ceEEEeecccCCCCCccccccccccChhhHHHHhcc-cCcccceeee--cceeeccc-ccccccc
Q 039817 305 FTVEAIDDADIPNGDLRDMARITTTDVNECRKAVMD-DCFCAAGVWR--EVVCLKKK-MPLLNAR 365 (725)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~-nCsC~A~~~~--~~~C~~~~-~~l~~~~ 365 (725)
..|+.++++.+++.. .......++++|++.|++ +|+|.|+.|. ++.|++|. .++.+..
T Consensus 4 ~~f~~~~~~~l~~~~---~~~~~~~s~~~C~~~C~~~~~~C~s~~y~~~~~~C~l~~~~~~~~~~ 65 (78)
T smart00473 4 DCFVRLPNTKLPGFS---RIVISVASLEECASKCLNSNCSCRSFTYNNGTKGCLLWSESSLGDAR 65 (78)
T ss_pred ceeEEecCccCCCCc---ceeEcCCCHHHHHHHhCCCCCceEEEEEcCCCCEEEEeeCCccccce
Confidence 468889999988543 222456799999999999 9999999996 68999998 6666654
No 459
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.09 E-value=8.1e-06 Score=78.43 Aligned_cols=100 Identities=20% Similarity=0.246 Sum_probs=66.4
Q ss_pred HHHHHHHHHHhccCcC--CccceeeEEEcCCceeeeeeccc--CCChhhhhccCCCCCHHHHHHHHHHHHHHhhh-hhcc
Q 039817 479 KSFLREVQVIGRTHHK--NLVQLLGFCIEQNHQLLVYELMK--NGTLSAFLFRQEIPTWDKRVEIALGIARGLLY-LHEE 553 (725)
Q Consensus 479 ~~f~~E~~~l~~l~H~--niv~l~g~~~~~~~~~lV~e~~~--~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~y-LH~~ 553 (725)
....+|.+.|.++... ++.+++.+- .-.|||||++ +..+....... ++......++.+++..+.. +|..
T Consensus 53 ~~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~ 126 (188)
T PF01163_consen 53 EWAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKA 126 (188)
T ss_dssp HHHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhc
Confidence 4567899999999765 566776552 4579999999 54444332211 1134566777888886666 4677
Q ss_pred cCCceeecCCccceEEeccCccccCCCCceEEeeccCccccC
Q 039817 554 CETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLK 595 (725)
Q Consensus 554 ~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~ 595 (725)
+|+|+|+.+.||++++ + .+.|+|||.+....
T Consensus 127 ---givHGDLs~~NIlv~~-------~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 127 ---GIVHGDLSEYNILVDD-------G-KVYIIDFGQAVDSS 157 (188)
T ss_dssp ---TEEESS-STTSEEEET-------T-CEEE--GTTEEETT
T ss_pred ---CceecCCChhhEEeec-------c-eEEEEecCcceecC
Confidence 9999999999999985 3 89999999887544
No 460
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.01 E-value=3.4e-05 Score=80.12 Aligned_cols=169 Identities=15% Similarity=0.196 Sum_probs=111.9
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCc
Q 039817 530 IPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTM 609 (725)
Q Consensus 530 ~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~ 609 (725)
...|...++.+..+|.+.+-||+. +.+-+|+.++|+|+++ +..+.|.|-....+-.+ ........|..
T Consensus 113 ~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd-------~~~V~LVdsDsfqi~~n--g~~~~cpVg~~ 180 (637)
T COG4248 113 HCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSD-------DSKVVLVDSDSFQINAN--GTLHLCPVGVS 180 (637)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeec-------CceEEEEcccceeeccC--CceEecccCcc
Confidence 468999999999999999999999 9999999999999987 77888887654333211 12222345888
Q ss_pred cccchhccc-----CCCCCCccceehhHHHHHHHHhC-CcCCCCCCCCc--ccccc-CcchHHHHHHH-HHcCC------
Q 039817 610 GYMAPEWLR-----NAPVTAKVDVYSFGVMLLEIIFC-KRHTELHRVDE--PTLAN-GMILTDWVLYC-VRTGN------ 673 (725)
Q Consensus 610 ~y~aPE~~~-----~~~~~~ksDv~S~G~vl~elltg-~~~~~~~~~~~--~~~~~-~~~~~~~~~~~-~~~~~------ 673 (725)
.|.+||... +..-+..+|.|-||+++++++.| +.|+..-.... +...+ ....-.++... .+.+.
T Consensus 181 eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~ 260 (637)
T COG4248 181 EFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRS 260 (637)
T ss_pred ccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCC
Confidence 999999764 34567889999999999999998 66775422111 10000 00000000000 01111
Q ss_pred CCh-hHHHHHHHHHHHccCCC--CCCCCCHHHHHHHhcCC
Q 039817 674 LGA-TKFERITMVGLWCICPQ--PTLRPSMKQVLQMLEGT 710 (725)
Q Consensus 674 ~~~-~~~~~l~~l~~~cl~~d--p~~RPs~~evl~~L~~~ 710 (725)
.+. ..+..+..+..+|+... +.-|||++..+..|..+
T Consensus 261 ~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 261 IPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred CChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 111 33456777888888753 56899999888777543
No 461
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.00 E-value=8e-05 Score=71.86 Aligned_cols=102 Identities=23% Similarity=0.296 Sum_probs=82.0
Q ss_pred HHHHHHHhccCc-CCccceeeEEEcCCceeeeeecccCCChhhh---hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCc
Q 039817 482 LREVQVIGRTHH-KNLVQLLGFCIEQNHQLLVYELMKNGTLSAF---LFRQEIPTWDKRVEIALGIARGLLYLHEECETQ 557 (725)
Q Consensus 482 ~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~---l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ 557 (725)
..|.-++..+++ +++.+++|+|- .++|.||.+.+++... +..--..+|..|.+|+.++++.+.+|++.....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 457888888876 69999999993 3679999987766421 212234689999999999999999999865546
Q ss_pred eeecCCccceEEeccCccccCCCCceEEeeccCcccc
Q 039817 558 IIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLL 594 (725)
Q Consensus 558 ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~ 594 (725)
+.-.|++++|+-+++ ++.+|+.|...+...
T Consensus 83 ~~lcDv~~~nfgv~~-------~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVND-------DGRLKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEeC-------CCcEEEEechhcchh
Confidence 888999999999987 788999999877654
No 462
>PRK09902 hypothetical protein; Provisional
Probab=97.88 E-value=4.9e-05 Score=73.55 Aligned_cols=110 Identities=15% Similarity=0.149 Sum_probs=85.2
Q ss_pred CccHHHHHHHHHHHhccCcC--CccceeeEEE-c----CCceeeeeecccC-CChhhhhccC--CCCCHHHHHHHHHHHH
Q 039817 475 GDGEKSFLREVQVIGRTHHK--NLVQLLGFCI-E----QNHQLLVYELMKN-GTLSAFLFRQ--EIPTWDKRVEIALGIA 544 (725)
Q Consensus 475 ~~~~~~f~~E~~~l~~l~H~--niv~l~g~~~-~----~~~~~lV~e~~~~-gsL~~~l~~~--~~l~~~~~~~i~~qia 544 (725)
+.++..|.+|...|.++... .+.++. ++. . ..+-.||+|-+++ -+|.+++... ...+...+..++.+++
T Consensus 60 P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va 138 (216)
T PRK09902 60 PFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVA 138 (216)
T ss_pred CCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHH
Confidence 44678899999999998633 345555 433 2 1246799997764 6999998664 3457778899999999
Q ss_pred HHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 545 RGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 545 ~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
..+.-||+. ++.|+|+.+.||+++.+ +...++++||.-++.
T Consensus 139 ~~ia~LH~~---Gv~Hgdly~khIll~~~-----g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 139 LAFKKMHSV---NRQHGCCYVRHIYVKTE-----GKAEAGFLDLEKSRR 179 (216)
T ss_pred HHHHHHHHC---CCcCCCCCHhheeecCC-----CCeeEEEEEhhccch
Confidence 999999999 99999999999999852 144599999987764
No 463
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.82 E-value=2.3e-05 Score=85.55 Aligned_cols=182 Identities=15% Similarity=0.122 Sum_probs=124.9
Q ss_pred HHHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccCcCC-ccceeeEEEcCCceeeeeecccCC-C-hhhh
Q 039817 448 YQELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKN-LVQLLGFCIEQNHQLLVYELMKNG-T-LSAF 524 (725)
Q Consensus 448 ~~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lV~e~~~~g-s-L~~~ 524 (725)
|.++.+..-....+.++.|-|.|...-.....+..-++++|.+++||| .++.++-+..++...++++++..+ + ....
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~ 326 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEM 326 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccccC
Confidence 444444433333344444444443222333366778999999999999 778888888888999999999876 2 2111
Q ss_pred hccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccc
Q 039817 525 LFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTM 604 (725)
Q Consensus 525 l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 604 (725)
......+..-+...+...-+++++|||+. .=+|+| ||+.. +...|..+|+....+.... ....
T Consensus 327 ~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s--------~~~~~~~~~~v~~~L~~~~--~~~t 389 (829)
T KOG0576|consen 327 TVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGS--------EEEVKLLDFAVPPQLTRTM--KPRT 389 (829)
T ss_pred ChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----ccccc--------ccccccccccCCcccCccc--cccc
Confidence 11112233345556677788999999997 568888 88765 4568999999887665433 2233
Q ss_pred cccCccccchhcccCCCCCCccceehhHHHHHHHHhCCcCCC
Q 039817 605 IRGTMGYMAPEWLRNAPVTAKVDVYSFGVMLLEIIFCKRHTE 646 (725)
Q Consensus 605 ~~gt~~y~aPE~~~~~~~~~ksDv~S~G~vl~elltg~~~~~ 646 (725)
..+++.++|||......+..+.|+|++|+---++--|..|-.
T Consensus 390 ~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 390 AIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred CCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 558999999999999999999999999987666665555443
No 464
>smart00108 B_lectin Bulb-type mannose-specific lectin.
Probab=97.67 E-value=0.00019 Score=63.23 Aligned_cols=77 Identities=23% Similarity=0.359 Sum_probs=55.6
Q ss_pred EEEcccccEEEEcCC-CceEEEeccC----ceeEEEEecCCCeEEecCCC----Ccc--CCCCceEEeeecCCCeEEeee
Q 039817 91 INLTVTGQLVLTHSN-GTQFKIYNGT----LTVSALMQDSGNFLYSNANG----SVD--YSTGRFVLEIQMDGNVVLSAF 159 (725)
Q Consensus 91 l~l~~~G~LvL~~~~-~~~~ws~~~~----~~~~a~LldsGNlVl~~~~~----~~d--~s~g~~~~~~~~~g~~~~~~~ 159 (725)
+.+..+|+||+.+.. +.++|+++.. ....+.|.++|||||.+.++ +.+ ...+.+.+.|+.+|+++++-
T Consensus 24 ~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~t~~~~~~~~~~L~ddGnlvl~~- 102 (114)
T smart00108 24 LIMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSSNTTGANGNYVLVLLDDGNLVIYD- 102 (114)
T ss_pred cCCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEecccCCCCceEEEEeCCCCEEEEC-
Confidence 344578999998765 5899987642 22578999999999988765 122 35788999999999998753
Q ss_pred ecCCCceeec
Q 039817 160 RFADPAYWYT 169 (725)
Q Consensus 160 ~~~~~~yw~~ 169 (725)
....+.|.+
T Consensus 103 -~~~~~~W~S 111 (114)
T smart00108 103 -SDGNFLWQS 111 (114)
T ss_pred -CCCCEEeCC
Confidence 233456654
No 465
>cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.
Probab=97.55 E-value=0.00033 Score=61.93 Aligned_cols=75 Identities=24% Similarity=0.371 Sum_probs=54.7
Q ss_pred Ecc-cccEEEEcCC-CceEEEeccC----ceeEEEEecCCCeEEecCCC----CccC--CCCceEEeeecCCCeEEeeee
Q 039817 93 LTV-TGQLVLTHSN-GTQFKIYNGT----LTVSALMQDSGNFLYSNANG----SVDY--STGRFVLEIQMDGNVVLSAFR 160 (725)
Q Consensus 93 l~~-~G~LvL~~~~-~~~~ws~~~~----~~~~a~LldsGNlVl~~~~~----~~d~--s~g~~~~~~~~~g~~~~~~~~ 160 (725)
... +|+||+.+.. ++++|+++.. ..+.+.|.++|||||.+.++ +.+. ..+.+.+.|+.+|++.++-.
T Consensus 26 ~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~~~~~~~~~~~~L~ddGnlvl~~~- 104 (116)
T cd00028 26 MQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYDS- 104 (116)
T ss_pred CCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEecccCCCCceEEEEeCCCCEEEECC-
Confidence 344 8999998764 5899987642 44678999999999998765 2222 36889999999999998532
Q ss_pred cCCCceeec
Q 039817 161 FADPAYWYT 169 (725)
Q Consensus 161 ~~~~~yw~~ 169 (725)
...+.|.+
T Consensus 105 -~~~~~W~S 112 (116)
T cd00028 105 -DGNFLWQS 112 (116)
T ss_pred -CCCEEEcC
Confidence 23556654
No 466
>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
Probab=97.44 E-value=0.00011 Score=58.84 Aligned_cols=46 Identities=22% Similarity=0.448 Sum_probs=36.0
Q ss_pred ecccCCCCCccccccccccChhhHHHHhcccCcccceeee--cceeecccc
Q 039817 311 DDADIPNGDLRDMARITTTDVNECRKAVMDDCFCAAGVWR--EVVCLKKKM 359 (725)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~nCsC~A~~~~--~~~C~~~~~ 359 (725)
.++++++.+ +......+.++|+..|+.+|+|.||.|. ++.|+++..
T Consensus 10 ~~~~~~g~d---~~~~~~~s~~~Cq~~C~~~~~C~afT~~~~~~~C~lk~~ 57 (73)
T cd01100 10 SNVDFRGGD---LSTVFASSAEQCQAACTADPGCLAFTYNTKSKKCFLKSS 57 (73)
T ss_pred CCCccccCC---cceeecCCHHHHHHHcCCCCCceEEEEECCCCeEEcccC
Confidence 466666665 3333456899999999999999999995 589998865
No 467
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.36 E-value=0.0007 Score=65.87 Aligned_cols=68 Identities=22% Similarity=0.246 Sum_probs=53.4
Q ss_pred CceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEe
Q 039817 507 NHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIA 586 (725)
Q Consensus 507 ~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~ 586 (725)
...+|+|||++|..|.+... ++. .++..+++++.-||+. ++.|+|.+|.|++++. +.+++.
T Consensus 116 ~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~--------~~i~iI 176 (229)
T PF06176_consen 116 SSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSN--------NGIRII 176 (229)
T ss_pred eEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEEC--------CcEEEE
Confidence 34568999999988876542 121 3556778889999999 9999999999999975 348999
Q ss_pred eccCccc
Q 039817 587 DFGLAKL 593 (725)
Q Consensus 587 Dfgla~~ 593 (725)
||+..+.
T Consensus 177 D~~~k~~ 183 (229)
T PF06176_consen 177 DTQGKRM 183 (229)
T ss_pred ECccccc
Confidence 9987653
No 468
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.25 E-value=0.0019 Score=65.50 Aligned_cols=59 Identities=8% Similarity=0.076 Sum_probs=42.8
Q ss_pred eEEEEEEcccccCccHHHHHHHHHHHhccC-cCCccceeeEEEcCCceeeeeecccCCChhhh
Q 039817 463 VEVAVKQLEKVTGDGEKSFLREVQVIGRTH-HKNLVQLLGFCIEQNHQLLVYELMKNGTLSAF 524 (725)
Q Consensus 463 ~~vavk~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~ 524 (725)
..+.||...... .....+|+++++.+. +--+.+++++...++..++|||++++.+|...
T Consensus 23 ~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 23 PGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred CcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 356677665432 345778999998884 44466888888777778999999999877644
No 469
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity. Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
Probab=97.21 E-value=0.0029 Score=55.55 Aligned_cols=82 Identities=22% Similarity=0.314 Sum_probs=50.8
Q ss_pred eeeeCCCeEEEeeeeCCCCCEEEEEEeccCCCCeEEEEe-CCCCCCCCCceEEEcccccEEEEcCCCceEEEecc-Ccee
Q 039817 41 TWPSTSGDFAFGFYPLVSGLFLVGIWFDKISERTLVWSA-NRDDPAQVGSSINLTVTGQLVLTHSNGTQFKIYNG-TLTV 118 (725)
Q Consensus 41 ~lvS~~g~F~lGFf~~~~~~~ylgIw~~~~~~~tvVWvA-Nr~~Pv~~~s~l~l~~~G~LvL~~~~~~~~ws~~~-~~~~ 118 (725)
.+.+.+|.+.|-|-..+. |-| |.. ..++||.. +..........+.|..+|||||.|..+.++|++.. ....
T Consensus 13 p~~~~s~~~~L~l~~dGn----Lvl-~~~--~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~~ptdt 85 (114)
T PF01453_consen 13 PLTSSSGNYTLILQSDGN----LVL-YDS--NGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFDYPTDT 85 (114)
T ss_dssp EEEECETTEEEEEETTSE----EEE-EET--TTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTTSSS-E
T ss_pred ccccccccccceECCCCe----EEE-EcC--CCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecCCCccE
Confidence 444434666665543221 222 222 25779999 43444435678999999999999999999997753 3445
Q ss_pred EEEEec--CCCeE
Q 039817 119 SALMQD--SGNFL 129 (725)
Q Consensus 119 ~a~Lld--sGNlV 129 (725)
....++ .||++
T Consensus 86 ~L~~q~l~~~~~~ 98 (114)
T PF01453_consen 86 LLPGQKLGDGNVT 98 (114)
T ss_dssp EEEEET--TSEEE
T ss_pred EEeccCcccCCCc
Confidence 556666 77777
No 470
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.21 E-value=0.00072 Score=79.11 Aligned_cols=199 Identities=18% Similarity=0.177 Sum_probs=134.7
Q ss_pred HHHHHHHHhccCcCCccceeeEEEcCCce----eeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCC
Q 039817 481 FLREVQVIGRTHHKNLVQLLGFCIEQNHQ----LLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECET 556 (725)
Q Consensus 481 f~~E~~~l~~l~H~niv~l~g~~~~~~~~----~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~ 556 (725)
..-|++.+.++.|+|++.+++|-.+.... .+..|++..-++...+..-...+......+..++.+||.|+|+.
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~--- 305 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSL--- 305 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHh---
Confidence 34567778889999999999998765433 34556777888888887778889999999999999999999997
Q ss_pred ceeecCCccceEEeccCccccCCCCceEEe--eccCccccCcCCCccccccccCccccchhcccCCCCCCc--cceehhH
Q 039817 557 QIIHCDIKPQNVLLDNNYITIDNNYITKIA--DFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAK--VDVYSFG 632 (725)
Q Consensus 557 ~ivH~dik~~NIll~~~~~~~~~~~~~kl~--Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k--sDv~S~G 632 (725)
...|.-+..+-..- ...++.+.+.++ ||+..+.......... ..-+..+.+||.........+ .|+|.+|
T Consensus 306 ~l~~v~L~~s~~~~----~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~--~~~~~~~~~~e~~~~~~~~~~r~~dL~~lg 379 (1351)
T KOG1035|consen 306 SLEHVVLSASSSKE----STVDGEGVVAISLSDFDSSKPLPDNEKSFS--DLLAEIRNADEDLKENTAKKSRLTDLWCLG 379 (1351)
T ss_pred ccceeEEecccccc----cccCccceeecchhhhcccccCCCcccchh--hcCccccccccccccccchhhhhhHHHHHH
Confidence 55554444432211 122446666766 8887776543322211 223456778887766655444 7999999
Q ss_pred HHHHHHHhCCcCCCCCCCCccccccCcchHHHHHHHHHcCCCChhHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 039817 633 VMLLEIIFCKRHTELHRVDEPTLANGMILTDWVLYCVRTGNLGATKFERITMVGLWCICPQPTLRPSMKQVLQML 707 (725)
Q Consensus 633 ~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dp~~RPs~~evl~~L 707 (725)
.....+..|..+......- ... ++......+......|+..++++|+++.+++.+.
T Consensus 380 ll~~~~~~~~~i~~~~~~~----------~~~---------l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 380 LLLLQLSQGEDISEKSAVP----------VSL---------LDVLSTSELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred HHHhhhhhcCcccccccch----------hhh---------hccccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence 9999999777654422110 000 0111111456677789999999999999999876
No 471
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=96.96 E-value=0.0024 Score=63.60 Aligned_cols=98 Identities=17% Similarity=0.192 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhccCcC--CccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCC
Q 039817 479 KSFLREVQVIGRTHHK--NLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECET 556 (725)
Q Consensus 479 ~~f~~E~~~l~~l~H~--niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~ 556 (725)
....+|.++|.+|+.. .+.+.+++ +.-.+|||+.++-.|...-. +....-.++..|.+-+.-+-..
T Consensus 154 l~A~rEf~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r~-----~~en~~~il~~il~~~~~~~~~--- 221 (304)
T COG0478 154 LAAEREFEALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLRL-----DVENPDEILDKILEEVRKAYRR--- 221 (304)
T ss_pred HHHHHHHHHHHHhhhcCCCCCCcccc----ccceeeeehcccceeecccC-----cccCHHHHHHHHHHHHHHHHHc---
Confidence 4467899999998654 66666554 45679999999865543321 2333344444444444444455
Q ss_pred ceeecCCccceEEeccCccccCCCCceEEeeccCccccC
Q 039817 557 QIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLK 595 (725)
Q Consensus 557 ~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~ 595 (725)
++||+|+.+-||++++ ++.+.++||-.+....
T Consensus 222 GiVHGDlSefNIlV~~-------dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 222 GIVHGDLSEFNILVTE-------DGDIVVIDWPQAVPIS 253 (304)
T ss_pred CccccCCchheEEEec-------CCCEEEEeCcccccCC
Confidence 9999999999999988 8899999998776543
No 472
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=96.93 E-value=0.0094 Score=59.50 Aligned_cols=54 Identities=15% Similarity=0.181 Sum_probs=39.1
Q ss_pred EEEEEcccccCccHHHHHHHHHHHhccCcCC--ccceeeEEEcCCceeeeeecccCCC
Q 039817 465 VAVKQLEKVTGDGEKSFLREVQVIGRTHHKN--LVQLLGFCIEQNHQLLVYELMKNGT 520 (725)
Q Consensus 465 vavk~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lV~e~~~~gs 520 (725)
..+|.... ........+|.++++.+..-. +.+.+++....+...+|||+++|..
T Consensus 25 ~VlR~~~~--~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 25 WMLKLYNP--GFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred EEEEeCCC--CCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 44565543 223456789999999986443 4778888888888889999999863
No 473
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=96.81 E-value=0.01 Score=57.66 Aligned_cols=100 Identities=19% Similarity=0.223 Sum_probs=69.8
Q ss_pred cHHHHHHHHHHHhccC------cCCccceeeEEEcCCceeeeeecccC------CChhhhhccCCCCCHHHHHHHHHHHH
Q 039817 477 GEKSFLREVQVIGRTH------HKNLVQLLGFCIEQNHQLLVYELMKN------GTLSAFLFRQEIPTWDKRVEIALGIA 544 (725)
Q Consensus 477 ~~~~f~~E~~~l~~l~------H~niv~l~g~~~~~~~~~lV~e~~~~------gsL~~~l~~~~~l~~~~~~~i~~qia 544 (725)
..+++.+|+.-+.++. +.+|.+++|+.+++.-.-+|+|.+.+ .+|.+++.+. .++. ...+.+.
T Consensus 54 ~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~-~~~~-~~~~~L~--- 128 (199)
T PF10707_consen 54 RYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG-GLTE-ELRQALD--- 128 (199)
T ss_pred hhHHHHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC-CccH-HHHHHHH---
Confidence 4567777877766665 88999999999999999999998753 3678888443 3443 3333333
Q ss_pred HHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEee
Q 039817 545 RGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIAD 587 (725)
Q Consensus 545 ~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~D 587 (725)
+-..||-+. .|+.+|++|.||++.... ++...+.|+|
T Consensus 129 ~f~~~l~~~---~Iv~~dl~~~NIv~~~~~---~~~~~lvlID 165 (199)
T PF10707_consen 129 EFKRYLLDH---HIVIRDLNPHNIVVQRRD---SGEFRLVLID 165 (199)
T ss_pred HHHHHHHHc---CCeecCCCcccEEEEecC---CCceEEEEEe
Confidence 344566666 899999999999997742 1122456665
No 474
>PLN02876 acyl-CoA dehydrogenase
Probab=96.50 E-value=0.019 Score=68.90 Aligned_cols=58 Identities=12% Similarity=0.260 Sum_probs=40.3
Q ss_pred EEEEEEccccc-CccHHHHHHHHHHHhccC-cCCc--cceeeEEEcC---CceeeeeecccCCCh
Q 039817 464 EVAVKQLEKVT-GDGEKSFLREVQVIGRTH-HKNL--VQLLGFCIEQ---NHQLLVYELMKNGTL 521 (725)
Q Consensus 464 ~vavk~l~~~~-~~~~~~f~~E~~~l~~l~-H~ni--v~l~g~~~~~---~~~~lV~e~~~~gsL 521 (725)
.+.+|+..... ......+.+|+++++.+. |.++ .+++++|.+. +..++||||+++..+
T Consensus 67 ~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~ 131 (822)
T PLN02876 67 RYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIF 131 (822)
T ss_pred eEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCccc
Confidence 34555543221 123457889999999995 6665 7888888764 467899999998654
No 475
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=96.35 E-value=0.018 Score=57.87 Aligned_cols=46 Identities=15% Similarity=0.091 Sum_probs=30.7
Q ss_pred cHHHHHHHHHHHhccCcC---CccceeeEEEcC---CceeeeeecccCCChh
Q 039817 477 GEKSFLREVQVIGRTHHK---NLVQLLGFCIEQ---NHQLLVYELMKNGTLS 522 (725)
Q Consensus 477 ~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~---~~~~lV~e~~~~gsL~ 522 (725)
....+.+|.+++..+... -+.++++..... ...+++||+++|.++.
T Consensus 31 ~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G~~l~ 82 (235)
T cd05155 31 YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEGETAT 82 (235)
T ss_pred hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecCCCCC
Confidence 355789999999888532 344555544332 2357899999987764
No 476
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=96.19 E-value=0.025 Score=56.39 Aligned_cols=59 Identities=17% Similarity=0.240 Sum_probs=40.3
Q ss_pred eEEEEEEcccccCccHHHHHHHHHHHhccCcC--CccceeeEEEc---CCceeeeeecccCCChhh
Q 039817 463 VEVAVKQLEKVTGDGEKSFLREVQVIGRTHHK--NLVQLLGFCIE---QNHQLLVYELMKNGTLSA 523 (725)
Q Consensus 463 ~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~--niv~l~g~~~~---~~~~~lV~e~~~~gsL~~ 523 (725)
..+++|..... .....+.+|..+++.+... .+.+++.+... ....+++|+++++..+..
T Consensus 21 ~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 84 (239)
T PF01636_consen 21 GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD 84 (239)
T ss_dssp SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence 36777776433 4567788999999888543 35677775543 235689999999988777
No 477
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=96.04 E-value=0.025 Score=55.89 Aligned_cols=100 Identities=16% Similarity=0.188 Sum_probs=65.5
Q ss_pred HHHHHHHhccC--cCCccceeeEEEcCCceeeeeecccCCC-hhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCce
Q 039817 482 LREVQVIGRTH--HKNLVQLLGFCIEQNHQLLVYELMKNGT-LSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQI 558 (725)
Q Consensus 482 ~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lV~e~~~~gs-L~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i 558 (725)
..|+..|+++. +-.+.+-+++. .-.|||||+.... -.-.|.. -.+.......+..++++.+.-|-.. .++
T Consensus 116 ~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~~--a~L 188 (268)
T COG1718 116 RKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYKE--AGL 188 (268)
T ss_pred HHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHHh--cCc
Confidence 35666666663 33444444443 3469999997531 1111211 1223335677778888888887762 289
Q ss_pred eecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 559 IHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 559 vH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
||+||..=|||+. ++.+.|+|++.+....+
T Consensus 189 VHgDLSEyNiL~~--------~~~p~iID~~QaV~~~h 218 (268)
T COG1718 189 VHGDLSEYNILVH--------DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred ccccchhhheEEE--------CCeEEEEECccccccCC
Confidence 9999999999997 46799999999886553
No 478
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=95.90 E-value=0.019 Score=63.87 Aligned_cols=103 Identities=19% Similarity=0.207 Sum_probs=64.7
Q ss_pred HHHHHHHHhccC----cCCccceeeEEE-cCCceeeeeecccCCChhhhhcc-CCCCCHHHHHHHHHHHHHH-hhhhhcc
Q 039817 481 FLREVQVIGRTH----HKNLVQLLGFCI-EQNHQLLVYELMKNGTLSAFLFR-QEIPTWDKRVEIALGIARG-LLYLHEE 553 (725)
Q Consensus 481 f~~E~~~l~~l~----H~niv~l~g~~~-~~~~~~lV~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~qia~g-L~yLH~~ 553 (725)
+.+|...+.+++ +..-+++=..+. -.....|+|||++|-.+.+.... ....+-+. ++..++++ +..+-..
T Consensus 208 y~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~---ia~~~~~~f~~q~~~d 284 (517)
T COG0661 208 YRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKE---LAELLVRAFLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHH---HHHHHHHHHHHHHHhc
Confidence 445555555542 222233333333 35678999999999999888522 23344333 33322222 2222223
Q ss_pred cCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCc
Q 039817 554 CETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKK 596 (725)
Q Consensus 554 ~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~ 596 (725)
++.|.|.+|.||+++. ++.+-+.|||+...+..
T Consensus 285 ---gffHaDpHpGNi~v~~-------~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 285 ---GFFHADPHPGNILVRS-------DGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---CccccCCCccceEEec-------CCcEEEEcCcceecCCH
Confidence 8999999999999987 78999999999876654
No 479
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.62 E-value=0.031 Score=62.08 Aligned_cols=109 Identities=17% Similarity=0.231 Sum_probs=65.6
Q ss_pred HHHHHHHHhcc----CcCCc---cceeeEEE-cCCceeeeeecccCCChhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhh
Q 039817 481 FLREVQVIGRT----HHKNL---VQLLGFCI-EQNHQLLVYELMKNGTLSAFLF-RQEIPTWDKRVEIALGIARGLLYLH 551 (725)
Q Consensus 481 f~~E~~~l~~l----~H~ni---v~l~g~~~-~~~~~~lV~e~~~~gsL~~~l~-~~~~l~~~~~~~i~~qia~gL~yLH 551 (725)
|.+|.+...+. .|-++ |++=.++. ....+.|+||||+|..+.|.-. +...++...+.. .+.++ |++
T Consensus 241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~---~l~~~--~~~ 315 (538)
T KOG1235|consen 241 FTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILN---KLVEA--YLE 315 (538)
T ss_pred hHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHH---HHHHH--HHH
Confidence 55666655443 35551 11222222 2457899999999988876642 122334333333 33222 222
Q ss_pred cccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcC
Q 039817 552 EECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKD 597 (725)
Q Consensus 552 ~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~ 597 (725)
.....+++|+|-+|.||++..+. +.+..+.+.|||+...+...
T Consensus 316 qIf~~GffHaDPHPGNilv~~~~---~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 316 QIFKTGFFHADPHPGNILVRPNP---EGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred HHHhcCCccCCCCCCcEEEecCC---CCCccEEEEcccccccccHH
Confidence 22223899999999999998532 23789999999998876543
No 480
>PRK10593 hypothetical protein; Provisional
Probab=95.53 E-value=0.13 Score=53.76 Aligned_cols=44 Identities=9% Similarity=0.125 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhccCc---CCccceeeEEEc---CCceeeeeecccCCCh
Q 039817 478 EKSFLREVQVIGRTHH---KNLVQLLGFCIE---QNHQLLVYELMKNGTL 521 (725)
Q Consensus 478 ~~~f~~E~~~l~~l~H---~niv~l~g~~~~---~~~~~lV~e~~~~gsL 521 (725)
...|..|.+.++.+.. -.+.+++++|.. .+..+||||++++.++
T Consensus 51 ~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 51 PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 4589999999999853 368899998864 3678999999998765
No 481
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=95.36 E-value=0.063 Score=58.19 Aligned_cols=49 Identities=24% Similarity=0.302 Sum_probs=38.1
Q ss_pred HHHHHHHHHHhccCcCCccceeeEEEcCC-ceeeeeecccCCChhhhhccC
Q 039817 479 KSFLREVQVIGRTHHKNLVQLLGFCIEQN-HQLLVYELMKNGTLSAFLFRQ 528 (725)
Q Consensus 479 ~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~e~~~~gsL~~~l~~~ 528 (725)
.+++-....++.++|+|+-..+.+-.... +..+|+|++. .||++.+..+
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~-~Sled~~~~~ 76 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYT-MSLEDILKTG 76 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhc-cchHHHHHhc
Confidence 45667778889999999999999887654 4667889884 5888888554
No 482
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=95.11 E-value=0.1 Score=53.28 Aligned_cols=30 Identities=20% Similarity=0.287 Sum_probs=24.9
Q ss_pred CceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 556 TQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 556 ~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
..++|+|+.|.||+++. ++ +.|+||+.+..
T Consensus 146 ~~l~H~Dl~~~Nil~~~-------~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 146 LAPLHMDVHAYNLVVTP-------QG-LKLIDWEYASD 175 (256)
T ss_pred CeeecCCCCcCcEEEeC-------CC-CEEEeccccCc
Confidence 46899999999999976 33 68999988753
No 483
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=94.78 E-value=0.086 Score=55.02 Aligned_cols=120 Identities=15% Similarity=0.179 Sum_probs=68.9
Q ss_pred EEEEEEcccccCccHHHHHHHHHHHhccCcCC--ccceeeE------EEcCCceeeeeecccCCChhh----hh------
Q 039817 464 EVAVKQLEKVTGDGEKSFLREVQVIGRTHHKN--LVQLLGF------CIEQNHQLLVYELMKNGTLSA----FL------ 525 (725)
Q Consensus 464 ~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~------~~~~~~~~lV~e~~~~gsL~~----~l------ 525 (725)
.+.+|.... ........|++++..+++.. +.+++.. ...++..++|++|++|..+.. ..
T Consensus 39 ~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~ 115 (296)
T cd05153 39 RYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEA 115 (296)
T ss_pred cEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHH
Confidence 466676643 33456778888888885433 4454442 123456689999999876532 00
Q ss_pred ----cc---C--------CCCCHHHHH----------HHHHHHHHHhhhhhc----ccCCceeecCCccceEEeccCccc
Q 039817 526 ----FR---Q--------EIPTWDKRV----------EIALGIARGLLYLHE----ECETQIIHCDIKPQNVLLDNNYIT 576 (725)
Q Consensus 526 ----~~---~--------~~l~~~~~~----------~i~~qia~gL~yLH~----~~~~~ivH~dik~~NIll~~~~~~ 576 (725)
+. . ....|.... .....+...+.++.+ ..+..++|+|+.|.||+++.
T Consensus 116 La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~---- 191 (296)
T cd05153 116 LARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRGVIHADLFRDNVLFDG---- 191 (296)
T ss_pred HHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCcCCccCcCcccEEEeC----
Confidence 00 0 001221111 011123334444443 12347999999999999986
Q ss_pred cCCCCceEEeeccCccc
Q 039817 577 IDNNYITKIADFGLAKL 593 (725)
Q Consensus 577 ~~~~~~~kl~Dfgla~~ 593 (725)
+..+.|.||+.+..
T Consensus 192 ---~~~~~iIDfe~a~~ 205 (296)
T cd05153 192 ---DELSGVIDFYFACT 205 (296)
T ss_pred ---CceEEEeehhhhcC
Confidence 55568999987753
No 484
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=94.10 E-value=0.29 Score=49.01 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=25.6
Q ss_pred CceeecCCccceEEeccCccccCCCCceEEeeccCcc
Q 039817 556 TQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAK 592 (725)
Q Consensus 556 ~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~ 592 (725)
..++|+|+.+.|||++.. +..+.++||..+.
T Consensus 170 ~~l~H~Dl~~~Nil~~~~------~~~~~lIDwe~a~ 200 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEE------KNSVKFIDYEYAG 200 (235)
T ss_pred EEEEcCCCCcCcEEEeCC------CCCEEEEEcccCC
Confidence 479999999999999751 3569999998765
No 485
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=94.07 E-value=0.0085 Score=72.17 Aligned_cols=156 Identities=12% Similarity=-0.005 Sum_probs=106.2
Q ss_pred HHHHHHHHhccCcCCccceeeEEE--cCCceeeeeecccCCChhhhhccC----CCCCHHHHHHHHHHH-HHHhhhhhcc
Q 039817 481 FLREVQVIGRTHHKNLVQLLGFCI--EQNHQLLVYELMKNGTLSAFLFRQ----EIPTWDKRVEIALGI-ARGLLYLHEE 553 (725)
Q Consensus 481 f~~E~~~l~~l~H~niv~l~g~~~--~~~~~~lV~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~qi-a~gL~yLH~~ 553 (725)
...|...++...|+++.....-.. +..+.+.+++|+..|.+...|-+. ..+. +.......++ +....-.|..
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld-~~~v~~~~kvsvl~~~~~ls~ 1354 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLD-RSPVHLRHKVSVLNRNVILSL 1354 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcch-hchHHHHHHHHHhccchhhhc
Confidence 344555555567888776554433 345778999999999999988654 1122 2222333333 4555554544
Q ss_pred cC--CceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCCCCCCccceehh
Q 039817 554 CE--TQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPVTAKVDVYSF 631 (725)
Q Consensus 554 ~~--~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDv~S~ 631 (725)
.. .-.+|+++|+-|.++.. +.++|++++|+.+...+..... ....+++.|+.|+....-.++.++|+|..
T Consensus 1355 tnlg~T~v~~~Lkf~lpmIVt-------ny~v~~gk~gLdKIknp~~sf~-Gl~l~sp~~v~qli~N~ik~t~rsdilr~ 1426 (2724)
T KOG1826|consen 1355 TNLGNTNVSKSLKFTLPMIVT-------NYNVKLGKGGLDKIKNPVLSFF-GLELCSPIYVLQLIKNEIKFTKRSDILRR 1426 (2724)
T ss_pred ccCCccchhhhhhhhccceec-------CCcccccccccccccCchHhhh-hhhhCCHHHHHHHHHHHHhhhhHHHHHHH
Confidence 22 24689999999999977 8899999999999543332222 22347778999998888889999999999
Q ss_pred HHHHHHHHhCCcCC
Q 039817 632 GVMLLEIIFCKRHT 645 (725)
Q Consensus 632 G~vl~elltg~~~~ 645 (725)
|.-+|+..-|..++
T Consensus 1427 s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1427 SLSLYLRSDGNAYF 1440 (2724)
T ss_pred HHHHHHHhcccHHH
Confidence 99999887665543
No 486
>smart00223 APPLE APPLE domain. Four-fold repeat in plasma kallikrein and coagulation factor XI. Factor XI apple 3 mediates binding to platelets. Factor XI apple 1 binds high-molecular-mass kininogen. Apple 4 in factor XI mediates dimer formation and binds to factor XIIa. Mutations in apple 4 cause factor XI deficiency, an inherited bleeding disorder.
Probab=93.80 E-value=0.064 Score=43.45 Aligned_cols=46 Identities=20% Similarity=0.345 Sum_probs=37.3
Q ss_pred ecccCCCCCccccccccccChhhHHHHhcccCcccceeee--cc---eeecccc
Q 039817 311 DDADIPNGDLRDMARITTTDVNECRKAVMDDCFCAAGVWR--EV---VCLKKKM 359 (725)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~nCsC~A~~~~--~~---~C~~~~~ 359 (725)
.++++++.+ ...+...+.++|++.|..+=.|.||.|. +. .|+++..
T Consensus 7 ~~~df~G~D---l~~~~~~~~~~Cq~~Ct~~~~C~~FTf~~~~~~~~~C~LK~s 57 (79)
T smart00223 7 KNVDFRGSD---INTVYVPSAQVCQKRCTSHPRCLFFTFSTNEPPEEKCLLKDS 57 (79)
T ss_pred cCccccCce---eeeeecCCHHHHHHhhcCCCCccEEEeeCCCCCCCEeEeCcC
Confidence 467777776 5666778999999999999999999994 35 8988753
No 487
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=93.56 E-value=0.15 Score=49.48 Aligned_cols=139 Identities=16% Similarity=0.185 Sum_probs=84.2
Q ss_pred EEEEEEcccccCc-cHHHHHHHHHHHhccCcCCccceeeEEEcCCceeeeeecccCCChhhhhccCCCCCHHHHHHHHHH
Q 039817 464 EVAVKQLEKVTGD-GEKSFLREVQVIGRTHHKNLVQLLGFCIEQNHQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALG 542 (725)
Q Consensus 464 ~vavk~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~q 542 (725)
+..+|++....-. ...-|..+.+++++++- |+++..= .+...-++.|.|-... ..-..++.-
T Consensus 87 ~L~lKKi~slp~~~~~~~y~nky~v~ArmhG--ilrL~ND--n~~~yGvIlE~Cy~~~-------------i~~~N~i~a 149 (308)
T PF07387_consen 87 PLFLKKIRSLPCCINDALYFNKYRVFARMHG--ILRLKND--NNYKYGVILERCYKIK-------------INFSNFITA 149 (308)
T ss_pred hhhhhhccCCCcccchhhhhhhhhHHHHhhh--eeEeecC--CCceeEEEEeeccCcc-------------cchhHHHHH
Confidence 3455666555544 45668889999998864 5555421 2334557888774311 111222232
Q ss_pred HHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCccccCcCCCccccccccCccccchhcccCCCC
Q 039817 543 IARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKLLKKDQTRTSTMIRGTMGYMAPEWLRNAPV 622 (725)
Q Consensus 543 ia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 622 (725)
-..+|.-.|+. ..+.+|+|..|+||+-|. .|.+||.|=+.-.. .+..|.--| ....
T Consensus 150 gi~~L~~fH~~-~~~~lHGD~np~NiM~D~-------~G~lKlVDP~~Ll~-------------~~V~~vN~~---Y~~l 205 (308)
T PF07387_consen 150 GIKDLMDFHSE-NQHCLHGDCNPDNIMCDK-------FGYLKLVDPVCLLE-------------NQVNMVNIE---YESL 205 (308)
T ss_pred hHHHHHHhhcc-CCCeecCCCChhheeecC-------CCCEEecChhhhhh-------------heeeEEeee---cccc
Confidence 24567777854 348999999999999877 89999998653221 111232211 2335
Q ss_pred CCccceehhHHHHHHHHhCCc
Q 039817 623 TAKVDVYSFGVMLLEIIFCKR 643 (725)
Q Consensus 623 ~~ksDv~S~G~vl~elltg~~ 643 (725)
++++.+-+|=.-++++....+
T Consensus 206 T~~aE~~~fv~s~l~~v~~~~ 226 (308)
T PF07387_consen 206 TQEAEVKVFVKSCLKLVEKQR 226 (308)
T ss_pred ChHHHHHHHHHHHHHHHHHHh
Confidence 677777777777777765444
No 488
>PLN02236 choline kinase
Probab=93.50 E-value=0.51 Score=50.42 Aligned_cols=120 Identities=19% Similarity=0.189 Sum_probs=67.4
Q ss_pred eEEEEEEcccccCccHHHHHHHHHHHhccCcCCc-cceeeEEEcCCceeeeeecccCCChhhh-----------------
Q 039817 463 VEVAVKQLEKVTGDGEKSFLREVQVIGRTHHKNL-VQLLGFCIEQNHQLLVYELMKNGTLSAF----------------- 524 (725)
Q Consensus 463 ~~vavk~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~e~~~~gsL~~~----------------- 524 (725)
..+.+|.......... .-.+|..+++.+...++ .++++.+..+ .|+||+++.+|...
T Consensus 66 ~~~v~Ri~g~~t~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~ 140 (344)
T PLN02236 66 RKVLVRIYGEGVELFF-DRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHARTLSAADLRDPEISALIAAKLRE 140 (344)
T ss_pred CeEEEEEccCCCCeee-chHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCCCCCCHHHcCChHHHHHHHHHHHH
Confidence 4566776644322222 23679999988864444 4666766443 58999987666421
Q ss_pred hccCC------CCCHHHHHHHHHHH-----------------HHHhhhh----hc-ccCCceeecCCccceEEeccCccc
Q 039817 525 LFRQE------IPTWDKRVEIALGI-----------------ARGLLYL----HE-ECETQIIHCDIKPQNVLLDNNYIT 576 (725)
Q Consensus 525 l~~~~------~l~~~~~~~i~~qi-----------------a~gL~yL----H~-~~~~~ivH~dik~~NIll~~~~~~ 576 (725)
+++.. ...|.+..++..++ ...+..| .. .....++|+|+++.||+++++
T Consensus 141 lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~--- 217 (344)
T PLN02236 141 FHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEE--- 217 (344)
T ss_pred HhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCC---
Confidence 11111 11123222322111 1112222 11 223478999999999999752
Q ss_pred cCCCCceEEeeccCccc
Q 039817 577 IDNNYITKIADFGLAKL 593 (725)
Q Consensus 577 ~~~~~~~kl~Dfgla~~ 593 (725)
+..+.++||..+..
T Consensus 218 ---~~~~~lID~Eya~~ 231 (344)
T PLN02236 218 ---TRAITIIDYEYASY 231 (344)
T ss_pred ---CCcEEEEeehhccc
Confidence 45799999988763
No 489
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=93.03 E-value=0.4 Score=49.46 Aligned_cols=31 Identities=32% Similarity=0.593 Sum_probs=24.9
Q ss_pred CceeecCCccceEEeccCccccCCCCc-eEEeeccCccc
Q 039817 556 TQIIHCDIKPQNVLLDNNYITIDNNYI-TKIADFGLAKL 593 (725)
Q Consensus 556 ~~ivH~dik~~NIll~~~~~~~~~~~~-~kl~Dfgla~~ 593 (725)
+.++|+|+++.||+++. ++. .-|.||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~-------~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDE-------DARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeC-------CCCEEEEECcHhccc
Confidence 46899999999999975 333 56999998764
No 490
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=92.93 E-value=0.42 Score=49.91 Aligned_cols=109 Identities=22% Similarity=0.323 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHhccCc--CCccceeeEEEcCC--ceeeeeecccCCChhhhhccC-------------------------
Q 039817 478 EKSFLREVQVIGRTHH--KNLVQLLGFCIEQN--HQLLVYELMKNGTLSAFLFRQ------------------------- 528 (725)
Q Consensus 478 ~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~--~~~lV~e~~~~gsL~~~l~~~------------------------- 528 (725)
.....+|.++|+.+.- --..+.++.|.++. ..+.||+|.++..+...+...
T Consensus 65 ~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~ 144 (321)
T COG3173 65 AHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAG 144 (321)
T ss_pred hhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcC
Confidence 3455678888877643 33456677887776 779999999884322211100
Q ss_pred ----C---------CCCHHHHHHH--------HHHHHHHhhhhhcc-----cCCceeecCCccceEEeccCccccCCCCc
Q 039817 529 ----E---------IPTWDKRVEI--------ALGIARGLLYLHEE-----CETQIIHCDIKPQNVLLDNNYITIDNNYI 582 (725)
Q Consensus 529 ----~---------~l~~~~~~~i--------~~qia~gL~yLH~~-----~~~~ivH~dik~~NIll~~~~~~~~~~~~ 582 (725)
. ...|...++. .-...+-..+|+.. ..+.++|+|+++.||+++. ..-
T Consensus 145 ~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~-------~~~ 217 (321)
T COG3173 145 LPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDP-------GRP 217 (321)
T ss_pred CCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeC-------CCe
Confidence 0 0011111110 01112223344332 2357999999999999987 344
Q ss_pred eEEeeccCccc
Q 039817 583 TKIADFGLAKL 593 (725)
Q Consensus 583 ~kl~Dfgla~~ 593 (725)
+-|.||+++..
T Consensus 218 ~gVlDwe~~~l 228 (321)
T COG3173 218 TGVLDWELATL 228 (321)
T ss_pred eEEEecccccc
Confidence 88999999875
No 491
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=92.78 E-value=0.46 Score=46.80 Aligned_cols=31 Identities=29% Similarity=0.493 Sum_probs=20.5
Q ss_pred CceeecCCccceEEe-ccCccccCCCCceEEeeccCccc
Q 039817 556 TQIIHCDIKPQNVLL-DNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 556 ~~ivH~dik~~NIll-~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
..+.|+|+.+.||++ +. ++.++++||..+..
T Consensus 143 ~v~cHnDl~~~Nil~~~~-------~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNK-------DGEVKLIDFEYAGY 174 (211)
T ss_dssp EEEE-S--SGGGEEETSS-------SSCEEE--GTT-EE
T ss_pred ceEeeccCccccEEeccC-------CCeEEEecHHHHhh
Confidence 368899999999999 44 78999999988753
No 492
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=92.55 E-value=0.51 Score=48.80 Aligned_cols=57 Identities=14% Similarity=0.177 Sum_probs=35.8
Q ss_pred CcceEEEEEEcccccCccHHHHHHHHHHHhccC---cCCccceeeEEEcCCceeeeeecccCC
Q 039817 460 GQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTH---HKNLVQLLGFCIEQNHQLLVYELMKNG 519 (725)
Q Consensus 460 ~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~e~~~~g 519 (725)
.++..+-||.-. ......|..|.+-|+.|. --.+.+++++...++..+||+||++.+
T Consensus 38 ~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 38 TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 344566777654 334567899999888884 445789999988888889999999876
No 493
>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A.
Probab=92.02 E-value=0.1 Score=38.15 Aligned_cols=25 Identities=28% Similarity=0.402 Sum_probs=17.6
Q ss_pred cccChhhHHHHhcccCcccceeeec
Q 039817 327 TTTDVNECRKAVMDDCFCAAGVWRE 351 (725)
Q Consensus 327 ~~~~~~~C~~~Cl~nCsC~A~~~~~ 351 (725)
...+.++|++.|.++=.|.++.|..
T Consensus 14 ~~~s~~~C~~~C~~~~~C~~~~~~~ 38 (51)
T PF14295_consen 14 TASSPEECQAACAADPGCQAFTFNP 38 (51)
T ss_dssp ----HHHHHHHHHTSTT--EEEEET
T ss_pred cCCCHHHHHHHccCCCCCCEEEEEC
Confidence 5568999999999999999999954
No 494
>PRK05231 homoserine kinase; Provisional
Probab=90.88 E-value=1.9 Score=45.47 Aligned_cols=32 Identities=28% Similarity=0.444 Sum_probs=26.0
Q ss_pred CCceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 555 ETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 555 ~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
+.+++|+|+.+.||+++. +...-|+||+.+..
T Consensus 186 p~~liHgD~~~~Nil~~~-------~~~~~iIDf~~~~~ 217 (319)
T PRK05231 186 PRGVIHADLFRDNVLFEG-------DRLSGFIDFYFACN 217 (319)
T ss_pred CcccCCCCCCCCcEEEEC-------CceEEEEecccccC
Confidence 448999999999999975 44457999998753
No 495
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=90.70 E-value=2.9 Score=45.36 Aligned_cols=55 Identities=13% Similarity=0.039 Sum_probs=36.6
Q ss_pred eEEEEEEcccc-----c--CccHHHHHHHHHHHhccC---cCCccceeeEEEcCCceeeeeecccCC
Q 039817 463 VEVAVKQLEKV-----T--GDGEKSFLREVQVIGRTH---HKNLVQLLGFCIEQNHQLLVYELMKNG 519 (725)
Q Consensus 463 ~~vavk~l~~~-----~--~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~e~~~~g 519 (725)
..|.||.-... . +...+.+..|.+.|..+. ..++.+++.+ +.+..++||||+++.
T Consensus 52 ~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lVME~L~~~ 116 (401)
T PRK09550 52 KSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTVMEDLSDH 116 (401)
T ss_pred eEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEEEecCCCc
Confidence 46888874311 1 234567788888888763 3457777777 335578999999864
No 496
>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins. Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....
Probab=90.53 E-value=0.17 Score=35.42 Aligned_cols=32 Identities=25% Similarity=0.687 Sum_probs=25.4
Q ss_pred CCCCcc-cccCCCCeeecCCCCceeeccCCCCCc
Q 039817 245 EPCTVN-TICGVFGFCTSDNNKEVTCECLRGYSP 277 (725)
Q Consensus 245 ~~Cd~~-~~CG~~g~C~~~~~~~~~C~Cl~GF~p 277 (725)
+.|... ..|++++.|. |...+-.|.|++||+.
T Consensus 3 dEC~~~~~~C~~~~~C~-N~~Gsy~C~C~~Gy~~ 35 (42)
T PF07645_consen 3 DECAEGPHNCPENGTCV-NTEGSYSCSCPPGYEL 35 (42)
T ss_dssp STTTTTSSSSSTTSEEE-EETTEEEEEESTTEEE
T ss_pred cccCCCCCcCCCCCEEE-cCCCCEEeeCCCCcEE
Confidence 567774 4799999997 4556779999999983
No 497
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=90.23 E-value=0.86 Score=44.15 Aligned_cols=84 Identities=24% Similarity=0.364 Sum_probs=56.0
Q ss_pred HHHHHHHHHhccC---cCCc--cceeeEEEcC------------------CceeeeeecccCCChhhhhccCCCCCHHHH
Q 039817 480 SFLREVQVIGRTH---HKNL--VQLLGFCIEQ------------------NHQLLVYELMKNGTLSAFLFRQEIPTWDKR 536 (725)
Q Consensus 480 ~f~~E~~~l~~l~---H~ni--v~l~g~~~~~------------------~~~~lV~e~~~~gsL~~~l~~~~~l~~~~~ 536 (725)
-|..|.+.+.+|+ +.++ |+.+||..-. ....||.||.+... ...
T Consensus 100 PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------~~~ 166 (207)
T PF13095_consen 100 PFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------PLQ 166 (207)
T ss_pred hHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------ccc
Confidence 4667777776664 3344 6777765311 12357778776532 223
Q ss_pred HHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEeeccCc
Q 039817 537 VEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLA 591 (725)
Q Consensus 537 ~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla 591 (725)
.+-+.++.+-|.-+|.. +|+-+|+++.|.. .-||+|||.+
T Consensus 167 ~~~~~~~~~dl~~~~k~---gI~~~Dv~~~ny~------------~G~lvDfs~~ 206 (207)
T PF13095_consen 167 IRDIPQMLRDLKILHKL---GIVPRDVKPRNYR------------GGKLVDFSSS 206 (207)
T ss_pred hhHHHHHHHHHHHHHHC---CeeeccCcccccc------------CCEEEecccC
Confidence 34456777788889998 9999999999976 2489999864
No 498
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.65 E-value=1.2 Score=43.63 Aligned_cols=70 Identities=20% Similarity=0.251 Sum_probs=48.3
Q ss_pred HHHHHHhcccCCcceEEEEEEcccccCccHHHHHHHHHHHhccC---cCCccceeeEEEcCCceeeeeecccCCChh
Q 039817 449 QELREATNVFDGQEVEVAVKQLEKVTGDGEKSFLREVQVIGRTH---HKNLVQLLGFCIEQNHQLLVYELMKNGTLS 522 (725)
Q Consensus 449 ~~l~~a~~~~~~~~~~vavk~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~e~~~~gsL~ 522 (725)
++|..|-..-+| ..++-||.-. ......|..|+.-|..|. .-++.+++.+-...++.++|+||++-+.++
T Consensus 27 G~inea~~v~dg-~~~~FvK~n~---~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 27 GDINEAWRLRDG-TDPFFVKCNQ---REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred ccccceeEeecC-CcceEEEecc---hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 444444444333 3466677542 234567889988777764 355778888888899999999999987775
No 499
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=88.97 E-value=2 Score=45.51 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=25.8
Q ss_pred ceeecCCccceEEeccCccccCCCCceEEeeccCccc
Q 039817 557 QIIHCDIKPQNVLLDNNYITIDNNYITKIADFGLAKL 593 (725)
Q Consensus 557 ~ivH~dik~~NIll~~~~~~~~~~~~~kl~Dfgla~~ 593 (725)
-++|.|+.+.||+++++ ++.++++||..|..
T Consensus 183 v~CHnDl~~~NiL~~~~------~~~l~lID~EYag~ 213 (330)
T PLN02421 183 VFAHNDLLSGNLMLNED------EGKLYFIDFEYGSY 213 (330)
T ss_pred EEEECCCCcccEEEeCC------CCcEEEEcccccCC
Confidence 57899999999999742 46799999988754
No 500
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=87.98 E-value=1.5 Score=46.13 Aligned_cols=71 Identities=17% Similarity=0.183 Sum_probs=54.6
Q ss_pred ceeeeeecccCCChhhhhccCCCCCHHHHHHHHHHHHHHhhhhhcccCCceeecCCccceEEeccCccccCCCCceEEee
Q 039817 508 HQLLVYELMKNGTLSAFLFRQEIPTWDKRVEIALGIARGLLYLHEECETQIIHCDIKPQNVLLDNNYITIDNNYITKIAD 587 (725)
Q Consensus 508 ~~~lV~e~~~~gsL~~~l~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ivH~dik~~NIll~~~~~~~~~~~~~kl~D 587 (725)
..+++|++.. ++|. ..+...+++...|+.+.++-+.-+..+ -+.-|||+.-.||||+ +|++.|+|
T Consensus 300 y~yl~~kdhg-t~is----~ik~~~~~e~lsff~s~~sil~~lekk--f~fehrnlt~~niLId--------~GnvtLID 364 (488)
T COG5072 300 YLYLHFKDHG-TPIS----IIKADRSEEELSFFWSCISILDILEKK--FPFEHRNLTLDNILID--------EGNVTLID 364 (488)
T ss_pred EEEEEEecCC-ceee----eeecccHHHHHHHHHHHHHHHhhhhhc--CCcccccccccceeee--------cCceEEEE
Confidence 4456666643 2322 223457899999999999888888776 3788999999999997 57899999
Q ss_pred ccCccc
Q 039817 588 FGLAKL 593 (725)
Q Consensus 588 fgla~~ 593 (725)
|-+++.
T Consensus 365 fklsRl 370 (488)
T COG5072 365 FKLSRL 370 (488)
T ss_pred eeeeec
Confidence 999995
Done!