BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039819
(534 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 387 bits (994), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/309 (62%), Positives = 231/309 (74%), Gaps = 20/309 (6%)
Query: 179 QEEGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-- 236
+E+ + LG L+ F+ RELQ A++NFS+KNILG GGFG VYKG+L DGT++AVKRLK+
Sbjct: 15 EEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEER 74
Query: 237 -------------MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPA--- 280
MIS+AVHRNLLRL G+C TPTERLLVYPYM+NGSVAS LRE+P
Sbjct: 75 XQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 134
Query: 281 -LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339
LDW R+RIA+G+ARGL YLH+ CDPKIIHRDVKAAN+LLD+ EA+VGDFGLAKL+D+
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Query: 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGA 399
D HV AVRGT+GHIAPEYLSTG+SSEKTDVFG+G++LLELITG RA + + N
Sbjct: 195 KDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 254
Query: 400 M-LEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
M L+W D +L NY EV +++QVALLCTQ P+ RPKMSEVVRML
Sbjct: 255 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
Query: 459 EGDGLAEKW 467
EGDGLAE+W
Sbjct: 315 EGDGLAERW 323
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/309 (61%), Positives = 228/309 (73%), Gaps = 20/309 (6%)
Query: 179 QEEGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-- 236
+E+ + LG L+ F+ RELQ A++NF +KNILG GGFG VYKG+L DG ++AVKRLK+
Sbjct: 7 EEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEER 66
Query: 237 -------------MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPA--- 280
MIS+AVHRNLLRL G+C TPTERLLVYPYM+NGSVAS LRE+P
Sbjct: 67 TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 126
Query: 281 -LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339
LDW R+RIA+G+ARGL YLH+ CDPKIIHRDVKAAN+LLD+ EA+VGDFGLAKL+D+
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Query: 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGA 399
D HV AVRG +GHIAPEYLSTG+SSEKTDVFG+G++LLELITG RA + + N
Sbjct: 187 KDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246
Query: 400 M-LEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
M L+W D +L NY EV +++QVALLCTQ P+ RPKMSEVVRML
Sbjct: 247 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
Query: 459 EGDGLAEKW 467
EGDGLAE+W
Sbjct: 307 EGDGLAERW 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 147/284 (51%), Gaps = 25/284 (8%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKR--------------LKDMISLA 241
+L++AT NF K ++G G FG VYKG L DG +A+KR + +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 242 VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR--EKP--ALDWNTRKRIAIGAARGL 297
H +L+ LIG+C E +L+Y YM NG++ L + P ++ W R I IGAARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 298 LYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIA 356
YLH + IIHRDVK+ N+LLD+ + DFG++K D +H+ V+GT+G+I
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML-EWXXXXXXXXXXXX 415
PEY G+ +EK+DV+ FG++L E++ A+ +S+ ++ L EW
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV--QSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 416 XXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
D L + + A+ C RP M +V+ LE
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 147/284 (51%), Gaps = 25/284 (8%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKR--------------LKDMISLA 241
+L++AT NF K ++G G FG VYKG L DG +A+KR + +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 242 VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRL--REKP--ALDWNTRKRIAIGAARGL 297
H +L+ LIG+C E +L+Y YM NG++ L + P ++ W R I IGAARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 298 LYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL-LDHSDSHVTTAVRGTVGHIA 356
YLH + IIHRDVK+ N+LLD+ + DFG++K + +H+ V+GT+G+I
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML-EWXXXXXXXXXXXX 415
PEY G+ +EK+DV+ FG++L E++ A+ +S+ ++ L EW
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV--QSLPREMVNLAEWAVESHNNGQLEQ 267
Query: 416 XXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
D L + + A+ C RP M +V+ LE
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 33/234 (14%)
Query: 184 ISLGNLRNFTFRELQQATENFSSK------NILGAGGFGNVYKGKLGDGTVLAVKRLKDM 237
+S +F+F EL+ T NF + N +G GGFG VYKG + + TV AVK+L M
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAM 65
Query: 238 ISLAV------------------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR--- 276
+ + H NL+ L+G+ + + LVY YM NGS+ RL
Sbjct: 66 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125
Query: 277 EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336
P L W+ R +IA GAA G+ +LHE IHRD+K+AN+LLD+ A + DFGLA+
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 337 LDH-SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ + + + + + GT ++APE L G+ + K+D++ FG++LLE+ITG+ A++
Sbjct: 183 SEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 132/234 (56%), Gaps = 33/234 (14%)
Query: 184 ISLGNLRNFTFRELQQATENFSSK------NILGAGGFGNVYKGKLGDGTVLAVKRLKDM 237
+S +F+F EL+ T NF + N +G GGFG VYKG + + TV AVK+L M
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAM 65
Query: 238 ISLAV------------------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR--- 276
+ + H NL+ L+G+ + + LVY YM NGS+ RL
Sbjct: 66 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125
Query: 277 EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336
P L W+ R +IA GAA G+ +LHE IHRD+K+AN+LLD+ A + DFGLA+
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 337 LDH-SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ + + + + GT ++APE L G+ + K+D++ FG++LLE+ITG+ A++
Sbjct: 183 SEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 130/234 (55%), Gaps = 33/234 (14%)
Query: 184 ISLGNLRNFTFRELQQATENFSSK------NILGAGGFGNVYKGKLGDGTVLAVKRLKDM 237
+S +F+F EL+ T NF + N +G GGFG VYKG + + TV AVK+L M
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAM 59
Query: 238 ISLAV------------------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR--- 276
+ + H NL+ L+G+ + + LVY YM NGS+ RL
Sbjct: 60 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 119
Query: 277 EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336
P L W+ R +IA GAA G+ +LHE IHRD+K+AN+LLD+ A + DFGLA+
Sbjct: 120 GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 337 LDHSDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ V + GT ++APE L G+ + K+D++ FG++LLE+ITG+ A++
Sbjct: 177 SEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 229
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 126/229 (55%), Gaps = 33/229 (14%)
Query: 189 LRNFTFRELQQATENFSSK------NILGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAV 242
+F+F EL+ T NF + N G GGFG VYKG + + TV AVK+L M+ +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITT 61
Query: 243 ------------------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR---EKPAL 281
H NL+ L+G+ + + LVY Y NGS+ RL P L
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 282 DWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341
W+ R +IA GAA G+ +LHE IHRD+K+AN+LLD+ A + DFGLA+ +
Sbjct: 122 SWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 342 SHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
V + + GT + APE L G+ + K+D++ FG++LLE+ITG+ A++
Sbjct: 179 QXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 85
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 142
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 202
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 203 GILLTEIVTHGR 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 87
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 88 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 144
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 145 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 204
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 205 GILLTEIVTHGR 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 88
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 89 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 145
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 146 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 205
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 206 GILLTEIVTHGR 217
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 89
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 90 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 146
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 147 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 206
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 207 GILLTEIVTHGR 218
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 136
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 197 GILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 81
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 82 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 138
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 139 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 198
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 199 GILLTEIVTHGR 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 85
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 142
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 143 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 202
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 203 GILLTEIVTHGR 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 80
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 81 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 137
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 138 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 197
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 198 GILLTEIVTHGR 209
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 84
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 85 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 141
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 142 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 201
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 202 GILLTEIVTHGR 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 136
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 197 GILLTEIVTHGR 208
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 136
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 197 GILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 74
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 75 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 131
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 132 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 191
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 192 GILLTEIVTHGR 203
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 75
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHR+++
Sbjct: 76 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRNLR 132
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 133 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 192
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 193 GILLTEIVTHGR 204
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 22/200 (11%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD----------------MISLAVHRNL 246
+ + K +GAG FG V++ + G+ +AVK L + ++ H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 247 LRLIGYCATPTERLLVYPYMSNGSVASRLRE---KPALDWNTRKRIAIGAARGLLYLHEQ 303
+ +G P +V Y+S GS+ L + + LD R +A A+G+ YLH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+P I+HRD+K+ N+L+D V DFGL++L S + GT +APE L
Sbjct: 157 -NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 364 QSSEKTDVFGFGILLLELIT 383
S+EK+DV+ FG++L EL T
Sbjct: 215 PSNEKSDVYSFGVILWELAT 234
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 19/192 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG G V+ G T +AVK LK +++ H+ L+RL T
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQ 79
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM NGS+ L+ + K + + A A G+ ++ E+ IHRD++
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 136
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AAN+L+ D + DFGLA+L++ ++ + + APE ++ G + K+DV+ F
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 375 GILLLELITGMR 386
GILL E++T R
Sbjct: 197 GILLTEIVTHGR 208
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 22/200 (11%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD----------------MISLAVHRNL 246
+ + K +GAG FG V++ + G+ +AVK L + ++ H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 247 LRLIGYCATPTERLLVYPYMSNGSVASRLRE---KPALDWNTRKRIAIGAARGLLYLHEQ 303
+ +G P +V Y+S GS+ L + + LD R +A A+G+ YLH +
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+P I+HR++K+ N+L+D V DFGL++L S + + GT +APE L
Sbjct: 157 -NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 364 QSSEKTDVFGFGILLLELIT 383
S+EK+DV+ FG++L EL T
Sbjct: 215 PSNEKSDVYSFGVILWELAT 234
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 27/237 (11%)
Query: 172 LNSSPDKQ-EEGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVY----------- 219
L S+P+ EE L S +N ++ Q A E+F LG G FGNVY
Sbjct: 5 LPSAPENNPEEELAS--KQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 220 ------KGKLGD-GTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVA 272
K +L G ++R ++ S H N+LRL GY T L+ Y G+V
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 273 SRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFG 332
L++ D A L Y H + ++IHRD+K N+LL E + DFG
Sbjct: 123 RELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179
Query: 333 LAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ H+ S T + GT+ ++ PE + EK D++ G+L E + G E
Sbjct: 180 WSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 18/189 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G + T +AVK LK +++ H L+RL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ YM+ GS+ L+ K I A A G+ Y+ + IHRD++
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLR 137
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AANVL+ + + DFGLA++++ ++ + + APE ++ G + K+DV+ F
Sbjct: 138 AANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSF 197
Query: 375 GILLLELIT 383
GILL E++T
Sbjct: 198 GILLYEIVT 206
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVY-----------------KGKLGD-GTVLAVKRLKD 236
++ Q A E+F LG G FGNVY K +L G ++R +
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G V L++ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 179
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 26/228 (11%)
Query: 180 EEGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVY-----------------KGK 222
EE L S +N ++ Q A E+F LG G FGNVY K +
Sbjct: 5 EEELAS--KQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ 62
Query: 223 LGD-GTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPAL 281
L G ++R ++ S H N+LRL GY T L+ Y G+V L++
Sbjct: 63 LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 122
Query: 282 DWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341
D A L Y H + ++IHRD+K N+LL E + DFG + H+
Sbjct: 123 DEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAP 176
Query: 342 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
S T + GT+ ++ PE + EK D++ G+L E + G E
Sbjct: 177 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVY-----------------KGKLGD-GTVLAVKRLKD 236
++ Q A E+F LG G FGNVY K +L G ++R +
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLP 175
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 91/210 (43%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKDMIS 239
Q A E+F LG G FGNVY + + +LA+K R ++ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + K+IHRD+K N+LL E + DFG + H+ S A+ GT+ ++ PE
Sbjct: 124 CHSK---KVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEM 177
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + G E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVY-----------------KGKLGD-GTVLAVKRLKD 236
++ Q A E+F LG G FGNVY K +L G ++R +
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 179
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 180 PEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKDMIS 239
Q A E+F LG G FGNVY + +LA+K R ++ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 177
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + G E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 93/195 (47%), Gaps = 25/195 (12%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 256 PTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDPKIIHRDV 313
P +L + GS + +K I I ARG+ YLH + IIHRD+
Sbjct: 80 P--QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDL 134
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS---SEKT 369
K+ N+ L + +GDFGLA + S SH + G++ +APE + S S ++
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 370 DVFGFGILLLELITG 384
DV+ FGI+L EL+TG
Sbjct: 195 DVYAFGIVLYELMTG 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKD 236
++ Q A E+F LG G FGNVY + +LA+K R +
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 177
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVY-----------------KGKLGD-GTVLAVKRLKDMIS 239
Q A E+F LG G FGNVY K +L G ++R ++ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDYLPPEM 177
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + G E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKD 236
++ Q A E+F LG G FGNVY + +LA+K R +
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 179
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVY-----------------KGKLGD-GTVLAVKRLKD 236
++ Q A E+F LG G FGNVY K +L G ++R +
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G V L++ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLXGTLDYLP 179
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 102/237 (43%), Gaps = 27/237 (11%)
Query: 172 LNSSPDKQ-EEGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVY----------- 219
L S+P+ EE L S +N ++ Q A E+F LG G FGNVY
Sbjct: 5 LPSAPENNPEEELAS--KQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 220 ------KGKLGD-GTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVA 272
K +L G ++R ++ S H N+LRL GY T L+ Y G+V
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 273 SRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFG 332
L++ D A L Y H + ++IHRD+K N+LL E + DFG
Sbjct: 123 RELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179
Query: 333 LAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ H+ S + GT+ ++ PE + EK D++ G+L E + G E
Sbjct: 180 WSV---HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKDMIS 239
Q A E+F LG G FGNVY + +LA+K R ++ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S A+ GT+ ++ PE
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEM 180
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + G E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKD 236
++ Q A E+F LG G FGNVY + +LA+K R +
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLP 174
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKD 236
++ Q A E+F LG G FGNVY + +LA+K R +
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLP 175
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKDMIS 239
Q A E+F LG G FGNVY + +LA+K R ++ S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 127
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++ PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 181
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + G E
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKDMIS 239
Q A E+F LG G FGNVY + +LA+K R ++ S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 122
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++ PE
Sbjct: 123 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 176
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + G E
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVY-----------------KGKLGD-GTVLAVKRLKD 236
++ Q A E+F LG G FGNVY K +L G ++R +
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLP 179
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKDMIS 239
Q A E+F LG G FGNVY + +LA+K R ++ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYLPPEM 177
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + G E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKDMIS 239
Q A E+F LG G FGNVY + +LA+K R ++ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEM 177
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + G E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKD 236
++ Q A E+F LG G FGNVY + +LA+K R +
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 177
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 18/189 (9%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LGAG FG V+ G + T +AVK LK +++ H L+RL
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVK 314
++ +M+ GS+ L+ K I A A G+ Y+ + IHRD++
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLR 136
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
AANVL+ + + DFGLA++++ ++ + + APE ++ G + K++V+ F
Sbjct: 137 AANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSF 196
Query: 375 GILLLELIT 383
GILL E++T
Sbjct: 197 GILLYEIVT 205
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKDMIS 239
Q A E+F LG G FGNVY + +LA+K R ++ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S A+ GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEM 177
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + G E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKDMIS 239
Q E+F LG G FGNVY + +LA+K R ++ S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSY 127
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++ PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 181
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + GM E
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVY-----------------KGKLGD-GTVLAVKRLKDMIS 239
Q A E+F LG G FGNVY K +L G ++R ++ S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 120
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S T + GT+ ++ PE
Sbjct: 121 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 174
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + G E
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 92/195 (47%), Gaps = 25/195 (12%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 256 PTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDPKIIHRDV 313
P +L + GS + +K I I ARG+ YLH + IIHRD+
Sbjct: 92 P--QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDL 146
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS---SEKT 369
K+ N+ L + +GDFGLA S SH + G++ +APE + S S ++
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 370 DVFGFGILLLELITG 384
DV+ FGI+L EL+TG
Sbjct: 207 DVYAFGIVLYELMTG 221
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 92/195 (47%), Gaps = 25/195 (12%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 256 PTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDPKIIHRDV 313
P +L + GS + +K I I ARG+ YLH + IIHRD+
Sbjct: 92 P--QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDL 146
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS---SEKT 369
K+ N+ L + +GDFGLA S SH + G++ +APE + S S ++
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 370 DVFGFGILLLELITG 384
DV+ FGI+L EL+TG
Sbjct: 207 DVYAFGIVLYELMTG 221
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 106/203 (52%), Gaps = 28/203 (13%)
Query: 205 SSKNILGAGGFGNVYKGKL----GDGTV-LAVKRLK---------DMISLA------VHR 244
+ + ++GAG FG VYKG L G V +A+K LK D + A H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI--GAARGLLYLHE 302
N++RL G + +++ YM NG++ LREK +++ + + + G A G+ YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYL-- 163
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYL 360
+ +HRD+ A N+L++ V DFGL+++L D ++ T+ + + APE +
Sbjct: 164 -ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 361 STGQSSEKTDVFGFGILLLELIT 383
S + + +DV+ FGI++ E++T
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMT 245
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKD 236
++ Q A E+F LG G FGNVY + +LA+K R +
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + +FG + H+ S T + GT+ ++
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLP 176
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 91/213 (42%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKD 236
++ Q A E+F LG G FGNVY + +LA+K R +
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S + GT+ ++
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDTLCGTLDYLP 175
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 91/213 (42%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVY-----------------KGKLGD-GTVLAVKRLKD 236
++ Q A E+F LG G FGNVY K +L G ++R +
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S + GT+ ++
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLP 176
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKD 236
++ Q A E+F LG G FGNVY + +LA+K R +
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + +FG + H+ S T + GT+ ++
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLP 177
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKDMIS 239
Q A E+F LG G FGNVY + +LA+K R ++ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEM 177
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + G E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 99/204 (48%), Gaps = 31/204 (15%)
Query: 206 SKNILGAGGFGNVYKGKLGDGT-------VLAVKRLKDMISLAV------------HRNL 246
S ++G G FG VY G+ D + ++ R+ +M + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 247 LRLIGYCATPTERL--LVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHE 302
L LIG P E L ++ PYM +G + +R P + + I+ G ARG+ YL E
Sbjct: 85 LALIG-IMLPPEGLPHVLLPYMCHGDLLQFIR-SPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK-LLDHSDSHVTT--AVRGTVGHIAPEY 359
Q K +HRD+ A N +LD+ V DFGLA+ +LD V R V A E
Sbjct: 143 Q---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199
Query: 360 LSTGQSSEKTDVFGFGILLLELIT 383
L T + + K+DV+ FG+LL EL+T
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 34/240 (14%)
Query: 174 SSPDKQEEGLISLGNLRNFTFRELQQATENFSS-----KNILGAGGFGNVYKGKLGDG-- 226
SSP Q I L L + +Q SS ++G G FG VY G L D
Sbjct: 16 SSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDG 75
Query: 227 -----TVLAVKRLKDMISLA------------VHRNLLRLIGYCA-TPTERLLVYPYMSN 268
V ++ R+ D+ ++ H N+L L+G C + L+V PYM +
Sbjct: 76 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 135
Query: 269 GSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEA 326
G + + +R + + + I G A+G+ YL + K +HRD+ A N +LD+
Sbjct: 136 GDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTV 191
Query: 327 IVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V DFGLA+ + ++ H T + V +A E L T + + K+DV+ FG+LL EL+T
Sbjct: 192 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 34/240 (14%)
Query: 174 SSPDKQEEGLISLGNLRNFTFRELQQATENFSS-----KNILGAGGFGNVYKGKLGDG-- 226
SSP Q I L L + +Q SS ++G G FG VY G L D
Sbjct: 15 SSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDG 74
Query: 227 -----TVLAVKRLKDMISLA------------VHRNLLRLIGYC-ATPTERLLVYPYMSN 268
V ++ R+ D+ ++ H N+L L+G C + L+V PYM +
Sbjct: 75 KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 134
Query: 269 GSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEA 326
G + + +R + + + I G A+G+ YL + K +HRD+ A N +LD+
Sbjct: 135 GDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTV 190
Query: 327 IVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V DFGLA+ + ++ H T + V +A E L T + + K+DV+ FG+LL EL+T
Sbjct: 191 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 43/210 (20%)
Query: 207 KNILGAGGFGNVYKG-KLGD----------------GTVLAVKRLKDMISLAVHRNLLRL 249
+ I+G GGFG VY+ +GD T+ V++ + ++ H N++ L
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 250 IGYCATPTERLLVYPYMSNGSV-----ASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
G C LV + G + R+ ++W A+ ARG+ YLH++
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEA 125
Query: 305 DPKIIHRDVKAANVLL------DDFCEAI--VGDFGLAKLLDHSDSHVTT--AVRGTVGH 354
IIHRD+K++N+L+ D I + DFGLA+ + H TT + G
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAW 180
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+APE + S+ +DV+ +G+LL EL+TG
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVY-----------------KGKLGD-GTVLAVKRLKDMIS 239
Q A E+F LG G FGNVY K +L G ++R ++ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S + GT+ ++ PE
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPPEM 180
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + G E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 29/201 (14%)
Query: 208 NILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLR 248
++G G FG VY G L D V ++ R+ D+ ++ H N+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 249 LIGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCD 305
L+G C + L+V PYM +G + + +R + + + I G A+G+ YL +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASK-- 152
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLST 362
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 153 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 363 GQSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKDMIS 239
Q E+F LG G FGNVY + +LA+K R ++ S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H N+LRL GY T L+ Y G+V L++ D A L Y
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSY 127
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H + ++IHRD+K N+LL E + DFG + H+ S + GT+ ++ PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRDTLCGTLDYLPPEM 181
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ EK D++ G+L E + GM E
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 91/213 (42%), Gaps = 24/213 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVK-----------------RLKD 236
++ Q A E+F LG G FGNVY + +LA+K R +
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
+ S H N+LRL GY T L+ Y G+V L++ D A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y H + ++IHRD+K N+LL E + DFG + H+ S + GT+ ++
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLP 177
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
PE + EK D++ G+L E + G E
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 29/201 (14%)
Query: 208 NILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLR 248
++G G FG VY G L D V ++ R+ D+ ++ H N+L
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 249 LIGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCD 305
L+G C + L+V PYM +G + + +R + + + I G A+G+ YL +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASK-- 150
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLST 362
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 151 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 363 GQSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 210 QKFTTKSDVWSFGVLLWELMT 230
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 29/201 (14%)
Query: 208 NILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLR 248
++G G FG VY G L D V ++ R+ D+ ++ H N+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 249 LIGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCD 305
L+G C + L+V PYM +G + + +R + + + I G A+G+ YL +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASK-- 152
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLST 362
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 153 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 363 GQSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 29/201 (14%)
Query: 208 NILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLR 248
++G G FG VY G L D V ++ R+ D+ ++ H N+L
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 249 LIGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCD 305
L+G C + L+V PYM +G + + +R + + + I G A+G+ YL +
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASK-- 144
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLST 362
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 145 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 363 GQSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 204 QKFTTKSDVWSFGVLLWELMT 224
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 29/201 (14%)
Query: 208 NILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLR 248
++G G FG VY G L D V ++ R+ D+ ++ H N+L
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 249 LIGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCD 305
L+G C + L+V PYM +G + + +R + + + I G A+G+ YL +
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASK-- 147
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLST 362
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 148 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 363 GQSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 207 QKFTTKSDVWSFGVLLWELMT 227
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 198 QQATENFSSKNILGAGGFGNVY------KGKLGDGTVLA---VKRLKD---------MIS 239
+ + ++F LG G FG V+ G+ VL V RLK M+S
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
+ H ++R+ G + ++ Y+ G + S LR+ K A L Y
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
LH + II+RD+K N+LLD + DFG AK + VT + GT +IAPE
Sbjct: 122 LHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPEV 174
Query: 360 LSTGQSSEKTDVFGFGILLLELITG 384
+ST ++ D + FGIL+ E++ G
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 29/201 (14%)
Query: 208 NILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLR 248
++G G FG VY G L D V ++ R+ D+ ++ H N+L
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 249 LIGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCD 305
L+G C + L+V PYM +G + + +R + + + I G A+G+ YL +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASK-- 151
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLST 362
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 152 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 363 GQSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 211 QKFTTKSDVWSFGVLLWELMT 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 29/201 (14%)
Query: 208 NILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLR 248
++G G FG VY G L D V ++ R+ D+ ++ H N+L
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 249 LIGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCD 305
L+G C + L+V PYM +G + + +R + + + I G A+G+ YL +
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASK-- 149
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLST 362
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 150 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 363 GQSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 209 QKFTTKSDVWSFGVLLWELMT 229
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 101/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLK---------DMIS-------LAVHRN 245
LG G FG V K K T +AVK LK D+IS + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRL--REKPALDW------NTRKRI-------- 289
++ L+G C ++ Y S G++ L RE P L++ N +++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
A ARG+ YL + K IHRD+ A NVL+ + + DFGLA+ + H D + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 37/205 (18%)
Query: 210 LGAGGFGNVYKGKL-GDGTVLAVKRL--------KDMI-------------SLAVHRNLL 247
+G GGFG V+KG+L D +V+A+K L +MI S H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKP-ALDWNTRKRIAIGAARGLLYLHEQCDP 306
+L G P +V ++ G + RL +K + W+ + R+ + A G+ Y+ Q +P
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NP 143
Query: 307 KIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
I+HRD+++ N+ L E A V DFGL++ H + + G +APE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPETIG 199
Query: 362 TGQSS--EKTDVFGFGILLLELITG 384
+ S EK D + F ++L ++TG
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTG 224
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 29/200 (14%)
Query: 209 ILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLRL 249
++G G FG VY G L D V ++ R+ D+ ++ H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 250 IGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDP 306
+G C + L+V PYM +G + + +R + + + I G A+G+ YL +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASK--- 151
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLSTG 363
K +HRD+ A N +LD+ V DFGLA+ + + H T + V +A E L T
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 364 QSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 212 KFTTKSDVWSFGVLLWELMT 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 29/200 (14%)
Query: 209 ILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLRL 249
++G G FG VY G L D V ++ R+ D+ ++ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 250 IGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDP 306
+G C + L+V PYM +G + + +R + + + I G A+G+ +L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASK--- 153
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAK-LLDHS-DS-HVTTAVRGTVGHIAPEYLSTG 363
K +HRD+ A N +LD+ V DFGLA+ +LD DS H T + V +A E L T
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 364 QSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 214 KFTTKSDVWSFGVLLWELMT 233
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVVS 74
Query: 257 TERL-LVYPYMSNGSVASRLR--EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDV 313
E + +V YM+ GS+ L+ E AL +A A G+ Y+ IHRD+
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDL 131
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
++AN+L+ + + DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 374 FGILLLELITGMRA 387
FGILL EL+T R
Sbjct: 192 FGILLTELVTKGRV 205
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
+G+G FG V+ G + +A+K +K+ M+ L+ H L++L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLS-HPKLVQLYGVCLE 93
Query: 256 PTERLLVYPYMSNGSVASRLREKPAL-DWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
LV+ +M +G ++ LR + L T + + G+ YL E C +IHRD+
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 150
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L+ + V DFG+ + + +T + V +PE S + S K+DV+ F
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 210
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 211 GVLMWEVFS 219
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 37/285 (12%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 9 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 66
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 127 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 183
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KD 233
Query: 415 XXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
+R G ++ ++ C Q+ P RP +E+ + E
Sbjct: 234 YRMERPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 37/285 (12%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 5 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 62
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 123 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KD 229
Query: 415 XXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
+R G ++ ++ C Q+ P RP +E+ + E
Sbjct: 230 YRMERPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 29/200 (14%)
Query: 209 ILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLRL 249
++G G FG VY G L D V ++ R+ D+ ++ H N+L L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 250 IGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDP 306
+G C + L+V PYM +G + + +R + + + I G A+G+ +L +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASK--- 211
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLSTG 363
K +HRD+ A N +LD+ V DFGLA+ + + H T + V +A E L T
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 364 QSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 272 KFTTKSDVWSFGVLLWELMT 291
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 37/285 (12%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 9 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 66
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 127 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KD 233
Query: 415 XXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
+R G ++ ++ C Q+ P RP +E+ + E
Sbjct: 234 YRMERPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLK---------DMIS-------LAVHRN 245
LG G FG V K K T +AVK LK D+IS + H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRL--REKPALDW------NTRKRI-------- 289
++ L+G C ++ Y S G++ L R P L++ N +++
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
A ARG+ YL + K IHRD+ A NVL+ + + DFGLA+ + H D + TT
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 29/200 (14%)
Query: 209 ILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLRL 249
++G G FG VY G L D V ++ R+ D+ ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 250 IGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDP 306
+G C + L+V PYM +G + + +R + + + I G A+G+ +L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASK--- 152
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLSTG 363
K +HRD+ A N +LD+ V DFGLA+ + + H T + V +A E L T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 364 QSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 29/200 (14%)
Query: 209 ILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLRL 249
++G G FG VY G L D V ++ R+ D+ ++ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 250 IGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDP 306
+G C + L+V PYM +G + + +R + + + I G A+G+ +L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASK--- 153
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLSTG 363
K +HRD+ A N +LD+ V DFGLA+ + + H T + V +A E L T
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 364 QSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 214 KFTTKSDVWSFGVLLWELMT 233
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 37/285 (12%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 8 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 65
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 125
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 126 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KD 232
Query: 415 XXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
+R G ++ ++ C Q+ P RP +E+ + E
Sbjct: 233 YRMERPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 29/200 (14%)
Query: 209 ILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLRL 249
++G G FG VY G L D V ++ R+ D+ ++ H N+L L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 250 IGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDP 306
+G C + L+V PYM +G + + +R + + + I G A+G+ +L +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASK--- 157
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLSTG 363
K +HRD+ A N +LD+ V DFGLA+ + + H T + V +A E L T
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 364 QSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 218 KFTTKSDVWSFGVLLWELMT 237
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLK---------DMIS-------LAVHRN 245
LG G FG V K K T +AVK LK D+IS + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRL--REKPALDW------NTRKRI-------- 289
++ L+G C ++ Y S G++ L R P L++ N +++
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
A ARG+ YL + K IHRD+ A NVL+ + + DFGLA+ + H D + TT
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 37/205 (18%)
Query: 210 LGAGGFGNVYKGKL-GDGTVLAVKRL--------KDMI-------------SLAVHRNLL 247
+G GGFG V+KG+L D +V+A+K L +MI S H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKP-ALDWNTRKRIAIGAARGLLYLHEQCDP 306
+L G P +V ++ G + RL +K + W+ + R+ + A G+ Y+ Q +P
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NP 143
Query: 307 KIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
I+HRD+++ N+ L E A V DF L++ H + + G +APE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPETIG 199
Query: 362 TGQSS--EKTDVFGFGILLLELITG 384
+ S EK D + F ++L ++TG
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTG 224
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 37/285 (12%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 9 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 66
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 127 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KD 233
Query: 415 XXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
+R G ++ ++ C Q+ P RP +E+ + E
Sbjct: 234 YRMERPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLK---------DMIS-------LAVHRN 245
LG G FG V K K T +AVK LK D+IS + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRL--REKPALDW------NTRKRI-------- 289
++ L+G C ++ Y S G++ L R P L++ N +++
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
A ARG+ YL + K IHRD+ A NVL+ + + DFGLA+ + H D + TT
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 29/200 (14%)
Query: 209 ILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLRL 249
++G G FG VY G L D V ++ R+ D+ ++ H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 250 IGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDP 306
+G C + L+V PYM +G + + +R + + + I G A+G+ +L +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASK--- 150
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLSTG 363
K +HRD+ A N +LD+ V DFGLA+ + + H T + V +A E L T
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 364 QSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 211 KFTTKSDVWSFGVLLWELMT 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 29/200 (14%)
Query: 209 ILGAGGFGNVYKGKLGDG-------TVLAVKRLKDMISLA------------VHRNLLRL 249
++G G FG VY G L D V ++ R+ D+ ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 250 IGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG--AARGLLYLHEQCDP 306
+G C + L+V PYM +G + + +R + + + I G A+G+ +L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASK--- 152
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHIAPEYLSTG 363
K +HRD+ A N +LD+ V DFGLA+ + + H T + V +A E L T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 364 QSSEKTDVFGFGILLLELIT 383
+ + K+DV+ FG+LL EL+T
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLR 248
E+ + LGAG FG V+ T +AVK +K +++ H L++
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 74
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDP 306
L T ++ +M+ GS+ L+ K I A A G+ ++ ++
Sbjct: 75 LHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR--- 130
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSS 366
IHRD++AAN+L+ + DFGLA++++ ++ + + APE ++ G +
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 367 EKTDVFGFGILLLELITGMR 386
K+DV+ FGILL+E++T R
Sbjct: 191 IKSDVWSFGILLMEIVTYGR 210
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLK---------DMIS-------LAVHRN 245
LG G FG V K K T +AVK LK D+IS + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRL--REKPALDW------NTRKRI-------- 289
++ L+G C ++ Y S G++ L R P L++ N +++
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
A ARG+ YL + K IHRD+ A NVL+ + + DFGLA+ + H D + TT
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLK---------DMIS-------LAVHRN 245
LG G FG V K K T +AVK LK D+IS + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRL--REKPALDW------NTRKRI-------- 289
++ L+G C ++ Y S G++ L R P L++ N +++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
A ARG+ YL + K IHRD+ A NVL+ + + DFGLA+ + H D + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 37/205 (18%)
Query: 210 LGAGGFGNVYKGKL-GDGTVLAVKRL--------KDMI-------------SLAVHRNLL 247
+G GGFG V+KG+L D +V+A+K L +MI S H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKP-ALDWNTRKRIAIGAARGLLYLHEQCDP 306
+L G P +V ++ G + RL +K + W+ + R+ + A G+ Y+ Q +P
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NP 143
Query: 307 KIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
I+HRD+++ N+ L E A V DFG ++ H + + G +APE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPETIG 199
Query: 362 TGQSS--EKTDVFGFGILLLELITG 384
+ S EK D + F ++L ++TG
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTG 224
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLK---------DMIS-------LAVHRN 245
LG G FG V K K T +AVK LK D+IS + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRL--REKPALDW------NTRKRI-------- 289
++ L+G C ++ Y S G++ L R P L++ N +++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
A ARG+ YL + K IHRD+ A NVL+ + + DFGLA+ + H D + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLK---------DMIS-------LAVHRN 245
LG G FG V K K T +AVK LK D+IS + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRL--REKPALDW------NTRKRI-------- 289
++ L+G C ++ Y S G++ L R P L++ N +++
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
A ARG+ YL + K IHRD+ A NVL+ + + DFGLA+ + H D + TT
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
+G+G FG V+ G + +A+K +++ M+ L+ H L++L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 76
Query: 256 PTERLLVYPYMSNGSVASRLREKPAL-DWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
LV+ +M +G ++ LR + L T + + G+ YL E C +IHRD+
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 133
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L+ + V DFG+ + + +T + V +PE S + S K+DV+ F
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 193
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 194 GVLMWEVFS 202
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 9 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 66
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 127 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------------ 231
Query: 415 XXXDRELGSNYDRIEVGE-----ILQVALLCTQYLPVHRPKMSEVVRMLE 459
+Y R+E E + ++ C Q+ P RP +E+ + E
Sbjct: 232 --------KDY-RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
+G+G FG V+ G + +A+K +++ M+ L+ H L++L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 73
Query: 256 PTERLLVYPYMSNGSVASRLREKPAL-DWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
LV+ +M +G ++ LR + L T + + G+ YL E C +IHRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 130
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L+ + V DFG+ + + +T + V +PE S + S K+DV+ F
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 191 GVLMWEVFS 199
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 37/285 (12%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 5 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 62
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 123 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 179
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KD 229
Query: 415 XXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
+R G ++ ++ C Q+ P RP +E+ + E
Sbjct: 230 YRMERPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 37/285 (12%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 6 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 63
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 124 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 180
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KD 230
Query: 415 XXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
+R G ++ ++ C Q+ P RP +E+ + E
Sbjct: 231 YRMERPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
+G+G FG V+ G + +A+K +++ M+ L+ H L++L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 71
Query: 256 PTERLLVYPYMSNGSVASRLREKPAL-DWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
LV+ +M +G ++ LR + L T + + G+ YL E C +IHRD+
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 128
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L+ + V DFG+ + + +T + V +PE S + S K+DV+ F
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 188
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 189 GVLMWEVFS 197
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLR 248
E+ + LGAG FG V+ T +AVK +K +++ H L++
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 247
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDP 306
L T ++ +M+ GS+ L+ K I A A G+ ++ ++
Sbjct: 248 LHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR--- 303
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSS 366
IHRD++AAN+L+ + DFGLA++++ ++ + + APE ++ G +
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 367 EKTDVFGFGILLLELITGMR 386
K+DV+ FGILL+E++T R
Sbjct: 364 IKSDVWSFGILLMEIVTYGR 383
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 256 PTERLLVYPYMSNGS--------VASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
P +L + GS + ++ +D IA A+G+ YLH +
Sbjct: 81 P--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS--- 129
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS- 365
IIHRD+K+ N+ L + +GDFGLA + S SH + G++ +APE +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 366 --SEKTDVFGFGILLLELITG 384
S ++DV+ FGI+L EL+TG
Sbjct: 190 PYSFQSDVYAFGIVLYELMTG 210
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 256 PTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
P + +V + S+ L + + IA A+G+ YLH + IIHRD+K
Sbjct: 76 P-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 131
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS---SEKTD 370
+ N+ L + +GDFGLA + S SH + G++ +APE + S ++D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 371 VFGFGILLLELITG 384
V+ FGI+L EL+TG
Sbjct: 192 VYAFGIVLYELMTG 205
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 37/285 (12%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 61
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KD 228
Query: 415 XXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
+R G ++ ++ C Q+ P RP +E+ + E
Sbjct: 229 YRMERPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 256 PTERLLVYPYMSNGS--------VASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
P +L + GS + ++ +D IA A+G+ YLH +
Sbjct: 78 P--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS--- 126
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS- 365
IIHRD+K+ N+ L + +GDFGLA + S SH + G++ +APE +
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 366 --SEKTDVFGFGILLLELITG 384
S ++DV+ FGI+L EL+TG
Sbjct: 187 PYSFQSDVYAFGIVLYELMTG 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 37/285 (12%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 61
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KD 228
Query: 415 XXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
+R G ++ ++ C Q+ P RP +E+ + E
Sbjct: 229 YRMERPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 256 PTERLLVYPYMSNGS--------VASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
P +L + GS + ++ +D IA A+G+ YLH +
Sbjct: 103 P--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS--- 151
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS- 365
IIHRD+K+ N+ L + +GDFGLA + S SH + G++ +APE +
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 366 --SEKTDVFGFGILLLELITG 384
S ++DV+ FGI+L EL+TG
Sbjct: 212 PYSFQSDVYAFGIVLYELMTG 232
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 256 PTERLLVYPYMSNGS--------VASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
P +L + GS + ++ +D IA A+G+ YLH +
Sbjct: 76 P--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS--- 124
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS- 365
IIHRD+K+ N+ L + +GDFGLA + S SH + G++ +APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 366 --SEKTDVFGFGILLLELITG 384
S ++DV+ FGI+L EL+TG
Sbjct: 185 PYSFQSDVYAFGIVLYELMTG 205
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 17 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 74
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 75 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 134
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 135 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 191
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 192 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------------ 239
Query: 415 XXXDRELGSNYDRIEVGE-----ILQVALLCTQYLPVHRPKMSEVVRMLE 459
+Y R+E E + ++ C Q+ P RP +E+ + E
Sbjct: 240 --------KDY-RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 6 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 63
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 124 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------------ 228
Query: 415 XXXDRELGSNYDRIEVGE-----ILQVALLCTQYLPVHRPKMSEVVRMLE 459
+Y R+E E + ++ C Q+ P RP +E+ + E
Sbjct: 229 --------KDY-RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 6 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 63
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 124 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------------ 228
Query: 415 XXXDRELGSNYDRIEVGE-----ILQVALLCTQYLPVHRPKMSEVVRMLE 459
+Y R+E E + ++ C Q+ P RP +E+ + E
Sbjct: 229 --------KDY-RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 37/201 (18%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 256 PTERLLVYPYMSNGS--------VASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
P +L + GS + ++ +D IA A+G+ YLH +
Sbjct: 104 P--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS--- 152
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS- 365
IIHRD+K+ N+ L + +GDFGLA + S SH + G++ +APE +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 366 --SEKTDVFGFGILLLELITG 384
S ++DV+ FGI+L EL+TG
Sbjct: 213 PYSFQSDVYAFGIVLYELMTG 233
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 256 PTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
P + +V + S+ L + + IA A+G+ YLH + IIHRD+K
Sbjct: 81 P-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLK 136
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS---SEKTD 370
+ N+ L + +GDFGLA + S SH + G++ +APE + S ++D
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 371 VFGFGILLLELITG 384
V+ FGI+L EL+TG
Sbjct: 197 VYAFGIVLYELMTG 210
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++++ T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++++ T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV-TTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++++ T K +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 59/296 (19%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 9 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 66
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
++ H NL++L+G C ++ +M+ G++ LRE R+ ++ A
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVS---AVV 117
Query: 297 LLYLHEQCDPKI--------IHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
LLY+ Q + IHRD+ A N L+ + V DFGL++L+
Sbjct: 118 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
+ + APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------ 231
Query: 409 XXXXXXXXXDRELGSNYDRIEVGE-----ILQVALLCTQYLPVHRPKMSEVVRMLE 459
+Y R+E E + ++ C Q+ P RP +E+ + E
Sbjct: 232 --------------KDY-RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 210 LGAGGFGNVYKGKL-GDGTVLAVKRLKD---------------MISLAVHRNLLRLIGYC 253
+G G FG V+ G+L D T++AVK ++ ++ H N++RLIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 254 ATPTERLLVYPYMSNGSVASRLREKPA-LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRD 312
+V + G + LR + A L T ++ AA G+ YL +C IHRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 313 VKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT-VGHIAPEYLSTGQSSEKTDV 371
+ A N L+ + + DFG+++ + +R V APE L+ G+ S ++DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 372 FGFGILLLELIT 383
+ FGILL E +
Sbjct: 299 WSFGILLWETFS 310
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++++ T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 119/288 (41%), Gaps = 45/288 (15%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD---------- 236
G+L ++E++ + ++G G FG V K K V A+K+++
Sbjct: 1 GSLHMIDYKEIE-------VEEVVGRGAFGVVCKAKWRAKDV-AIKQIESESERKAFIVE 52
Query: 237 --MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRI---AI 291
+S H N+++L G C P LV Y GS+ + L L + T +
Sbjct: 53 LRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL 110
Query: 292 GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI-VGDFGLAKLLDHSDSHVTTAVRG 350
++G+ YLH +IHRD+K N+LL + + DFG A + +H+T +G
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN-KG 166
Query: 351 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXX 410
+ +APE SEK DVF +GI+L E+IT + + I + W
Sbjct: 167 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVHNGTR 223
Query: 411 XXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
+ + S R C P RP M E+V+++
Sbjct: 224 PPLIKNLPKPIESLMTR------------CWSKDPSQRPSMEEIVKIM 259
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++++ T K +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 38/226 (16%)
Query: 192 FTFRELQQATENFSSK---------NILGAGGFGNVYKGKLG----DGTVLAVKRLK--- 235
FTF + +A F+ + ++GAG FG V G L +A+K LK
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 236 ------DMISLAV------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW 283
D +S A H N++ L G T +++ +M NGS+ S LR+ +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-QF 132
Query: 284 NTRKRIAI--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DH 339
+ + + G A G+ YL D +HRD+ A N+L++ V DFGL++ L D
Sbjct: 133 TVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 189
Query: 340 SDSHVTTAVRGT--VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
SD T+A+ G + APE + + + +DV+ +GI++ E+++
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 49/291 (16%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 61
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
++ H NL++L+G C ++ +M+ G++ LRE R+ ++ A
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE------CNRQEVS---AVV 112
Query: 297 LLYLHEQCDPKI--------IHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
LLY+ Q + IHRD+ A N L+ + V DFGL++L+
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
+ + APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------ 226
Query: 409 XXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
+R G ++ ++ C Q+ P RP +E+ + E
Sbjct: 227 ----KDYRMERPEGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 250 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 307
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 367
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHR++ A N L+ + V DFGL++L+ + +
Sbjct: 368 SAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 424
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------------ 472
Query: 415 XXXDRELGSNYDRIEVGE-----ILQVALLCTQYLPVHRPKMSEVVRMLE 459
+Y R+E E + ++ C Q+ P RP +E+ + E
Sbjct: 473 --------KDY-RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 59/296 (19%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 61
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
++ H NL++L+G C ++ +M+ G++ LRE R+ ++ A
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE------CNRQEVS---AVV 112
Query: 297 LLYLHEQCDPKI--------IHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
LLY+ Q + IHRD+ A N L+ + V DFGL++L+
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
+ + APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------ 226
Query: 409 XXXXXXXXXDRELGSNYDRIEVGE-----ILQVALLCTQYLPVHRPKMSEVVRMLE 459
+Y R+E E + ++ C Q+ P RP +E+ + E
Sbjct: 227 --------------KDY-RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 21/193 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 332
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 389
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 374 FGILLLELITGMR 386
FGILL EL T R
Sbjct: 450 FGILLTELTTKGR 462
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLK---------DMIS-------LAVHRN 245
LG G FG V K K T +AVK LK D+IS + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRL--REKPALDW------NTRKRI-------- 289
++ L+G C ++ Y S G++ L R P L++ N +++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAV 348
A ARG+ YL + K IHRD+ A NVL+ + + DFGLA+ + H D TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 73
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 130
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 190
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 191 FGILLTELTTKGRV 204
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++++ T K +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 59/296 (19%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 61
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
++ H NL++L+G C ++ +M+ G++ LRE R+ ++ A
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVS---AVV 112
Query: 297 LLYLHEQCDPKI--------IHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
LLY+ Q + IHRD+ A N L+ + V DFGL++L+
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
+ + APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------ 226
Query: 409 XXXXXXXXXDRELGSNYDRIEVGE-----ILQVALLCTQYLPVHRPKMSEVVRMLE 459
+Y R+E E + ++ C Q+ P RP +E+ + E
Sbjct: 227 --------------KDY-RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 130/296 (43%), Gaps = 59/296 (19%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 61
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
++ H NL++L+G C ++ +M+ G++ LRE R+ ++ A
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVS---AVV 112
Query: 297 LLYLHEQCDPKI--------IHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
LLY+ Q + IHRD+ A N L+ + V DFGL++L+
Sbjct: 113 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
+ + APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------ 226
Query: 409 XXXXXXXXXDRELGSNYDRIEVGE-----ILQVALLCTQYLPVHRPKMSEVVRMLE 459
+Y R+E E + ++ C Q+ P RP +E+ + E
Sbjct: 227 --------------KDY-RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 306
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 367 FGILLTELTTKGRV 380
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 208 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 265
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAA 294
++ H NL++L+G C ++ +M+ G++ LRE + ++ +A +
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 325
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ YL ++ IHR++ A N L+ + V DFGL++L+ + +
Sbjct: 326 SAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 382
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXX 414
APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 383 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------------ 430
Query: 415 XXXDRELGSNYDRIEVGE-----ILQVALLCTQYLPVHRPKMSEVVRMLE 459
+Y R+E E + ++ C Q+ P RP +E+ + E
Sbjct: 431 --------KDY-RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 59/296 (19%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD------------- 236
N+ E+++ + + K+ LG G +G VY+G ++ +AVK LK+
Sbjct: 211 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 268
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
++ H NL++L+G C ++ +M+ G++ LRE R+ ++ A
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVS---AVV 319
Query: 297 LLYLHEQCDPKI--------IHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
LLY+ Q + IHR++ A N L+ + V DFGL++L+
Sbjct: 320 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 379
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
+ + APE L+ + S K+DV+ FG+LL E+ T + G ++Q +LE
Sbjct: 380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE------ 433
Query: 409 XXXXXXXXXDRELGSNYDRIEVGE-----ILQVALLCTQYLPVHRPKMSEVVRMLE 459
+Y R+E E + ++ C Q+ P RP +E+ + E
Sbjct: 434 --------------KDY-RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 306
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 367 FGILLTELTTKGRV 380
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 210 LGAGGFGNVYKGKL-GDGTVLAVKRLKD---------------MISLAVHRNLLRLIGYC 253
+G G FG V+ G+L D T++AVK ++ ++ H N++RLIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 254 ATPTERLLVYPYMSNGSVASRLREKPA-LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRD 312
+V + G + LR + A L T ++ AA G+ YL +C IHRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 313 VKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT-VGHIAPEYLSTGQSSEKTDV 371
+ A N L+ + + DFG+++ + +R V APE L+ G+ S ++DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 372 FGFGILLLELIT 383
+ FGILL E +
Sbjct: 299 WSFGILLWETFS 310
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++++ T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD-------------MISLAVHRNLLR 248
+ + K+ LG G FG VY+G ++ +AVK LK+ ++ H NL++
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKI 308
L+G C ++ +M+ G++ LRE R+ ++ A LLY+ Q +
Sbjct: 72 LLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVS---AVVLLYMATQISSAM 122
Query: 309 --------IHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
IHRD+ A N L+ + V DFGL++L+ + + APE L
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 182
Query: 361 STGQSSEKTDVFGFGILLLELIT 383
+ + S K+DV+ FG+LL E+ T
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 140
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++++ T K +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D + TT
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++++ T K +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D + TT
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++++ T K +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 76
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 133
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 193
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 194 FGILLTELTTKGRV 207
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++++ T K +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D + TT
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++++ T K +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D + TT
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 40/238 (16%)
Query: 182 GLISLGNLRNF----TFRELQQATENFSSK---------NILGAGGFGNVYKGKLG---- 224
G + L LR F TF + Q F+ + ++GAG FG V G+L
Sbjct: 12 GHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 225 DGTVLAVKRLK---------DMISLAV------HRNLLRLIGYCATPTERLLVYPYMSNG 269
+A+K LK D + A H N++RL G ++V YM NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 270 SVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI 327
S+ S LR+ A + + + + G A G+ YL D +HRD+ A N+L++
Sbjct: 132 SLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCK 187
Query: 328 VGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V DFGLA++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++
Sbjct: 188 VSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAVVS 83
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 140
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 249
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 306
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 367 FGILLTELTTKGRV 380
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 140
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 72
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 129
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 189
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 190 FGILLTELTTKGRV 203
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 95/209 (45%), Gaps = 26/209 (12%)
Query: 202 ENFSSKNILGAGGFGNVYK-GKLGDGTVLAVKRL---------KDMISLAV-------HR 244
E++ +G G +G K + DG +L K L K M+ V H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 245 NLLRLIGYCA--TPTERLLVYPYMSNGSVASRL----REKPALDWNTRKRIAIGAARGLL 298
N++R T T +V Y G +AS + +E+ LD R+ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 299 YLHEQCD--PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
H + D ++HRD+K ANV LD +GDFGLA++L+H S T V GT +++
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMS 184
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGM 385
PE ++ +EK+D++ G LL EL M
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALM 213
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 37/201 (18%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 256 PTERLLVYPYMSNGS--------VASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
P +L + GS + ++ +D IA A+G+ YLH +
Sbjct: 104 P--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS--- 152
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS- 365
IIHRD+K+ N+ L + +GDFGLA S SH + G++ +APE +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 366 --SEKTDVFGFGILLLELITG 384
S ++DV+ FGI+L EL+TG
Sbjct: 213 PYSFQSDVYAFGIVLYELMTG 233
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 37/201 (18%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 256 PTERLLVYPYMSNGS--------VASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
P +L + GS + ++ +D IA A+G+ YLH +
Sbjct: 96 P--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS--- 144
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS- 365
IIHRD+K+ N+ L + +GDFGLA S SH + G++ +APE +
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 366 --SEKTDVFGFGILLLELITG 384
S ++DV+ FGI+L EL+TG
Sbjct: 205 PYSFQSDVYAFGIVLYELMTG 225
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 37/201 (18%)
Query: 210 LGAGGFGNVYKGKL-GDGTV-------------LAVKRLKDMISLAVHRNLLRLIGYCAT 255
+G+G FG VYKGK GD V A K ++ H N+L +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 256 PTERLLVYPYMSNGS--------VASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
P +L + GS + ++ +D IA A+G+ YLH +
Sbjct: 76 P--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS--- 124
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQS- 365
IIHRD+K+ N+ L + +GDFGLA S SH + G++ +APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 366 --SEKTDVFGFGILLLELITG 384
S ++DV+ FGI+L EL+TG
Sbjct: 185 PYSFQSDVYAFGIVLYELMTG 205
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 74
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 131
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 192 FGILLTELTTKGRV 205
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 140
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 140
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 210 LGAGGFGNVYKGKL----GDGTVLAVKRLK-DMISLAV----------------HRNLLR 248
LG G FG V +G+ G +AVK LK D++S HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPA-LDWNTRKRIAIGAARGLLYLHEQCDPK 307
L G TP ++ V GS+ RLR+ T R A+ A G+ YL + +
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 135
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV--GHIAPEYLSTGQS 365
IHRD+ A N+LL +GDFGL + L +D H V APE L T
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 195
Query: 366 SEKTDVFGFGILLLELIT 383
S +D + FG+ L E+ T
Sbjct: 196 SHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 210 LGAGGFGNVYKGKL----GDGTVLAVKRLK-DMISLAV----------------HRNLLR 248
LG G FG V +G+ G +AVK LK D++S HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPA-LDWNTRKRIAIGAARGLLYLHEQCDPK 307
L G TP ++ V GS+ RLR+ T R A+ A G+ YL + +
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 141
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV--GHIAPEYLSTGQS 365
IHRD+ A N+LL +GDFGL + L +D H V APE L T
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 201
Query: 366 SEKTDVFGFGILLLELIT 383
S +D + FG+ L E+ T
Sbjct: 202 SHASDTWMFGVTLWEMFT 219
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 210 LGAGGFGNVYKGKL----GDGTVLAVKRLK-DMISLAV----------------HRNLLR 248
LG G FG V +G+ G +AVK LK D++S HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPA-LDWNTRKRIAIGAARGLLYLHEQCDPK 307
L G TP ++ V GS+ RLR+ T R A+ A G+ YL + +
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 141
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV--GHIAPEYLSTGQS 365
IHRD+ A N+LL +GDFGL + L +D H V APE L T
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF 201
Query: 366 SEKTDVFGFGILLLELIT 383
S +D + FG+ L E+ T
Sbjct: 202 SHASDTWMFGVTLWEMFT 219
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 47/279 (16%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD-------------MISLAVHRNLLR 248
+ + K+ LG G +G VY+G ++ +AVK LK+ ++ H NL++
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKI 308
L+G C ++ +M+ G++ LRE R+ ++ A LLY+ Q +
Sbjct: 72 LLGVCTREPPFYIIIEFMTYGNLLDYLRE------CNRQEVS---AVVLLYMATQISSAM 122
Query: 309 --------IHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
IHRD+ A N L+ + V DFGL++L+ + + APE L
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 182
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRE 420
+ + S K+DV+ FG+LL E+ T + G +Q +LE +R
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE----------KDYRMERP 232
Query: 421 LGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G ++ ++ C Q+ P RP +E+ + E
Sbjct: 233 EGCP------EKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
+G+G FG V+ G + +A+K +++ M+ L+ H L++L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 74
Query: 256 PTERLLVYPYMSNGSVASRLREKPAL-DWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
LV +M +G ++ LR + L T + + G+ YL E C +IHRD+
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 131
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L+ + V DFG+ + + +T + V +PE S + S K+DV+ F
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 191
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 192 GVLMWEVFS 200
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 210 LGAGGFGNVYKGKL----GDGTVLAVKRLK-DMISLAV----------------HRNLLR 248
LG G FG V +G+ G +AVK LK D++S HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPA-LDWNTRKRIAIGAARGLLYLHEQCDPK 307
L G TP ++ V GS+ RLR+ T R A+ A G+ YL + +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 131
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV--GHIAPEYLSTGQS 365
IHRD+ A N+LL +GDFGL + L +D H V APE L T
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF 191
Query: 366 SEKTDVFGFGILLLELIT 383
S +D + FG+ L E+ T
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 40/238 (16%)
Query: 182 GLISLGNLRNF----TFRELQQATENFSSK---------NILGAGGFGNVYKGKLG---- 224
G + L LR F TF + Q F+ + ++GAG FG V G+L
Sbjct: 12 GHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 225 DGTVLAVKRLK---------DMISLAV------HRNLLRLIGYCATPTERLLVYPYMSNG 269
+A+K LK D + A H N++RL G ++V YM NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 270 SVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI 327
S+ S LR+ A + + + + G A G+ YL D +HRD+ A N+L++
Sbjct: 132 SLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCK 187
Query: 328 VGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V DFGL+++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 210 LGAGGFGNVYKGKL----GDGTVLAVKRLK-DMISLAV----------------HRNLLR 248
LG G FG V +G+ G +AVK LK D++S HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPA-LDWNTRKRIAIGAARGLLYLHEQCDPK 307
L G TP ++ V GS+ RLR+ T R A+ A G+ YL + +
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 135
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV--GHIAPEYLSTGQS 365
IHRD+ A N+LL +GDFGL + L +D H V APE L T
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 195
Query: 366 SEKTDVFGFGILLLELIT 383
S +D + FG+ L E+ T
Sbjct: 196 SHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 210 LGAGGFGNVYKGKL----GDGTVLAVKRLK-DMISLAV----------------HRNLLR 248
LG G FG V +G+ G +AVK LK D++S HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPA-LDWNTRKRIAIGAARGLLYLHEQCDPK 307
L G TP ++ V GS+ RLR+ T R A+ A G+ YL + +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 131
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV--GHIAPEYLSTGQS 365
IHRD+ A N+LL +GDFGL + L +D H V APE L T
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 366 SEKTDVFGFGILLLELIT 383
S +D + FG+ L E+ T
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 210 LGAGGFGNVYKGKL----GDGTVLAVKRLK-DMISLAV----------------HRNLLR 248
LG G FG V +G+ G +AVK LK D++S HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPA-LDWNTRKRIAIGAARGLLYLHEQCDPK 307
L G TP ++ V GS+ RLR+ T R A+ A G+ YL + +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 131
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV--GHIAPEYLSTGQS 365
IHRD+ A N+LL +GDFGL + L +D H V APE L T
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 366 SEKTDVFGFGILLLELIT 383
S +D + FG+ L E+ T
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 26/209 (12%)
Query: 202 ENFSSKNILGAGGFGNVYK-GKLGDGTVLAVKRL---------KDMISLAV-------HR 244
E++ +G G +G K + DG +L K L K M+ V H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 245 NLLRLIGYCA--TPTERLLVYPYMSNGSVASRL----REKPALDWNTRKRIAIGAARGLL 298
N++R T T +V Y G +AS + +E+ LD R+ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 299 YLHEQCD--PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
H + D ++HRD+K ANV LD +GDFGLA++L+H D+ A GT +++
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKAFVGTPYYMS 184
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGM 385
PE ++ +EK+D++ G LL EL M
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALM 213
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 111/268 (41%), Gaps = 38/268 (14%)
Query: 207 KNILGAGGFGNVYKGKLGDGTVLAVKRLKD------------MISLAVHRNLLRLIGYCA 254
+ ++G G FG V K K V A+K+++ +S H N+++L G C
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKDV-AIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 255 TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRI---AIGAARGLLYLHEQCDPKIIHR 311
P LV Y GS+ + L L + T + ++G+ YLH +IHR
Sbjct: 72 NPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 312 DVKAANVLLDDFCEAI-VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 370
D+K N+LL + + DFG A + +H+T +G+ +APE SEK D
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN-KGSAAWMAPEVFEGSNYSEKCD 185
Query: 371 VFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEV 430
VF +GI+L E+IT + + I + W + + S R
Sbjct: 186 VFSWGIILWEVITRRKPFD---EIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR--- 239
Query: 431 GEILQVALLCTQYLPVHRPKMSEVVRML 458
C P RP M E+V+++
Sbjct: 240 ---------CWSKDPSQRPSMEEIVKIM 258
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 80
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YM+ GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM---NYVHRDL 137
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 198 FGILLTELTTKGRV 211
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 40/238 (16%)
Query: 182 GLISLGNLRNF----TFRELQQATENFSSK---------NILGAGGFGNVYKGKLG---- 224
G + L LR F TF + Q F+ + ++GAG FG V G+L
Sbjct: 12 GHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 225 DGTVLAVKRLK---------DMISLAV------HRNLLRLIGYCATPTERLLVYPYMSNG 269
+A+K LK D + A H N++RL G ++V YM NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 270 SVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI 327
S+ S LR+ A + + + + G A G+ YL D +HRD+ A N+L++
Sbjct: 132 SLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCK 187
Query: 328 VGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V DFGL+++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 80
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YM+ GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM---NYVHRDL 137
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 198 FGILLTELTTKGRV 211
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS G + L+ + + + + A A G+ Y+ +HRD+
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 140
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 250
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 307
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGL +L++ ++ + + APE G+ + K+DV+
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 367
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 368 FGILLTELTTKGRV 381
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS GS+ L+ + + + + A A G+ Y+ +HRD+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 140
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 44/215 (20%)
Query: 210 LGAGGFGNVY--------KGKLGDGTVLAVKRLKD----------------MISLAVHRN 245
LG G FG V K K + +AVK LKD M + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDWN-----------TRKRIA-- 290
++ L+G C ++ Y S G++ LR + P ++ + T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 291 -IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAV 348
ARG+ YL Q K IHRD+ A NVL+ + + DFGLA+ +++ D TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 40/238 (16%)
Query: 182 GLISLGNLRNF----TFRELQQATENFSSK---------NILGAGGFGNVYKGKLG---- 224
G + L LR F TF + Q F+ + ++GAG FG V G+L
Sbjct: 12 GHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 225 DGTVLAVKRLK---------DMISLAV------HRNLLRLIGYCATPTERLLVYPYMSNG 269
+A+K LK D + A H N++RL G ++V YM NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 270 SVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI 327
S+ S LR+ A + + + + G A G+ YL D +HRD+ A N+L++
Sbjct: 132 SLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCK 187
Query: 328 VGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V DFGL ++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++
Sbjct: 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 31/203 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD-------------MISLAVHRNLLR 248
+ + K+ LG G +G VY+G ++ +AVK LK+ ++ H NL++
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKI 308
L+G C ++ +M+ G++ LRE R+ ++ A LLY+ Q +
Sbjct: 72 LLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVS---AVVLLYMATQISSAM 122
Query: 309 --------IHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
IHRD+ A N L+ + V DFGL++L+ + + APE L
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESL 182
Query: 361 STGQSSEKTDVFGFGILLLELIT 383
+ + S K+DV+ FG+LL E+ T
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 179 QEEGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-- 236
QE+ I R+ ++ +A+E S I G+G FG VYKGK + + ++ D
Sbjct: 14 QEKNKIRPRGQRDSSYYWEIEASEVMLSTRI-GSGSFGTVYKGKWHGDVAVKILKVVDPT 72
Query: 237 ------------MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-EKPALDW 283
++ H N+L +GY T +V + S+ L ++
Sbjct: 73 PEQFQAFRNEVAVLRKTRHVNILLFMGYM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQM 131
Query: 284 NTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH-SDS 342
IA A+G+ YLH + IIHRD+K+ N+ L + +GDFGLA + S S
Sbjct: 132 FQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188
Query: 343 HVTTAVRGTVGHIAPEYLSTGQS---SEKTDVFGFGILLLELITG 384
G+V +APE + + S ++DV+ +GI+L EL+TG
Sbjct: 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 21/194 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATP 256
LG G FG V+ G T +A+K LK ++ H L++L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVS 83
Query: 257 TERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDV 313
E + +V YMS G + L+ + + + + A A G+ Y+ +HRD+
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 140
Query: 314 KAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 373
+AAN+L+ + V DFGLA+L++ ++ + + APE G+ + K+DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 374 FGILLLELITGMRA 387
FGILL EL T R
Sbjct: 201 FGILLTELTTKGRV 214
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 188 NLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKD---------- 236
NL + + + + + K+ LG G +G VY G ++ +AVK LK+
Sbjct: 18 NLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLK 77
Query: 237 ---MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAI 291
++ H NL++L+G C +V YM G++ LRE + + +A
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMAT 137
Query: 292 GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT 351
+ + YL ++ IHRD+ A N L+ + V DFGL++L+ +
Sbjct: 138 QISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFP 194
Query: 352 VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+ APE L+ S K+DV+ FG+LL E+ T
Sbjct: 195 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 49/228 (21%)
Query: 202 ENFSSKNILGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MIS 239
EN +LG+G FG V K G +AVK LK+ M
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREK------PALDWNTRKRI---- 289
L H N++ L+G C L++ Y G + + LR K +++ +KR+
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 290 -------------AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK- 335
A A+G+ +L + +HRD+ A NVL+ + DFGLA+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 336 LLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
++ S+ V R V +APE L G + K+DV+ +GILL E+ +
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
+G+G FG V+ G + +A+K +++ M+ L+ H L++L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLE 73
Query: 256 PTERLLVYPYMSNGSVASRLREKPAL-DWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
LV+ +M +G ++ LR + L T + + G+ YL E +IHRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDLA 130
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L+ + V DFG+ + + +T + V +PE S + S K+DV+ F
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 191 GVLMWEVFS 199
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 27/225 (12%)
Query: 182 GLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKLG----DGTVLAVKRLK-- 235
GL+ G+ + + N S ++GAG FG V G+L +A+K LK
Sbjct: 13 GLVPRGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 72
Query: 236 -------DMISLAV------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD 282
D + A H N++RL G ++V YM NGS+ S LR+ A
Sbjct: 73 YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-Q 131
Query: 283 WNTRKRIAI--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--D 338
+ + + + G A G+ YL D +HRD+ A N+L++ V DFGL+++L D
Sbjct: 132 FTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 188
Query: 339 HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
++ T + + +PE ++ + + +DV+ +GI+L E+++
Sbjct: 189 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 40/238 (16%)
Query: 182 GLISLGNLRNF----TFRELQQATENFSSK---------NILGAGGFGNVYKGKLG---- 224
G + L LR F T+ + Q F+ + ++GAG FG V G+L
Sbjct: 12 GHLKLPGLRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 225 DGTVLAVKRLK---------DMISLAV------HRNLLRLIGYCATPTERLLVYPYMSNG 269
+A+K LK D + A H N++RL G ++V YM NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 270 SVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI 327
S+ S LR+ A + + + + G A G+ YL D +HRD+ A N+L++
Sbjct: 132 SLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCK 187
Query: 328 VGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V DFGL+++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 40/238 (16%)
Query: 182 GLISLGNLRNF----TFRELQQATENFSSK---------NILGAGGFGNVYKGKLG---- 224
G + L LR + TF + Q F+ + ++GAG FG V G+L
Sbjct: 12 GHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 225 DGTVLAVKRLK---------DMISLAV------HRNLLRLIGYCATPTERLLVYPYMSNG 269
+A+K LK D + A H N++RL G ++V YM NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 270 SVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI 327
S+ S LR+ A + + + + G A G+ YL D +HRD+ A N+L++
Sbjct: 132 SLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCK 187
Query: 328 VGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V DFGL+++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 203 NFSSKNILGAGGFGNVYKGKLG----DGTVLAVKRLK---------DMISLAV------H 243
N S ++GAG FG V G+L +A+K LK D + A H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI--GAARGLLYLH 301
N++RL G ++V YM NGS+ S LR+ A + + + + G A G+ YL
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLS 135
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEY 359
D +HRD+ A N+L++ V DFGL+++L D ++ T + + +PE
Sbjct: 136 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 360 LSTGQSSEKTDVFGFGILLLELIT 383
++ + + +DV+ +GI+L E+++
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 202 ENFSSKNILGAGGFGNVYK-GKLGDGTVLAVKRL---------KDMISLAV-------HR 244
E++ +G G +G K + DG +L K L K M+ V H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 245 NLLRLIGYCA--TPTERLLVYPYMSNGSVASRL----REKPALDWNTRKRIAIGAARGLL 298
N++R T T +V Y G +AS + +E+ LD R+ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 299 YLHEQCD--PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
H + D ++HRD+K ANV LD +GDFGLA++L+H + V GT +++
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMS 184
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGM 385
PE ++ +EK+D++ G LL EL M
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALM 213
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 29/205 (14%)
Query: 203 NFSSKNILGAGGFGNVYKGKLG----DGTVLAVKRLK---------DMISLAV------H 243
N S ++GAG FG V G+L +A+K LK D + A H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI--GAARGLLYLH 301
N++RL G ++V YM NGS+ S LR+ A + + + + G A G+ YL
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYL- 161
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRG---TVGHIAPE 358
D +HRD+ A N+L++ V DFGL+++L+ D RG + +PE
Sbjct: 162 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEAAYTTRGGKIPIRWTSPE 218
Query: 359 YLSTGQSSEKTDVFGFGILLLELIT 383
++ + + +DV+ +GI+L E+++
Sbjct: 219 AIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 203 NFSSKNILGAGGFGNVYKGKLG----DGTVLAVKRLK---------DMISLAV------H 243
N S ++GAG FG V G+L +A+K LK D + A H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI--GAARGLLYLH 301
N++RL G ++V YM NGS+ S LR+ A + + + + G A G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYL- 163
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEY 359
D +HRD+ A N+L++ V DFGL+++L D ++ T + + +PE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 360 LSTGQSSEKTDVFGFGILLLELIT 383
++ + + +DV+ +GI+L E+++
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 36/214 (16%)
Query: 203 NFSSKNILGAGGFGNVYK------GKLGDGTVLAVKRLKD----------------MISL 240
N LGAG FG V + GK +AVK LK M L
Sbjct: 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 98
Query: 241 AVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRK----------RIA 290
H N++ L+G C L++ Y G + + LR K D + +
Sbjct: 99 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 158
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK-LLDHSDSHVTTAVR 349
A+G+ +L + IHRDV A NVLL + A +GDFGLA+ +++ S+ V R
Sbjct: 159 SQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 215
Query: 350 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V +APE + + ++DV+ +GILL E+ +
Sbjct: 216 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 39/204 (19%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLKD-------------MISLAVHRNLL---R 248
LG G FG+V + LGD G ++AVK+L+ I A+H + + R
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD--- 305
+ Y E LV Y+ +G + D+ R R + A+R LLY + C
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLR---------DFLQRHRARLDASRLLLYSSQICKGME 125
Query: 306 ----PKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEY 359
+ +HRD+ A N+L++ + DFGLAKL LD V + + APE
Sbjct: 126 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 360 LSTGQSSEKTDVFGFGILLLELIT 383
LS S ++DV+ FG++L EL T
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 26/224 (11%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 244 RNLLRLIGYCATPTERLLV-YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
++L +C E+L Y NG + +R+ + D + L YLH
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLS 361
+ IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 156 K---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 362 TGQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 256
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 25/192 (13%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
LG+G FG V GK +AVK +K+ M+ L+ H L++ G C+
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS-HPKLVKFYGVCSK 74
Query: 256 PTERLLVYPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
+V Y+SNG + + LR L+ + + G+ +L + IHRD+
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLA 131
Query: 315 AANVLLD-DFCEAIVGDFGLAK-LLDHSDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDV 371
A N L+D D C V DFG+ + +LD D +V++ + V APE + S K+DV
Sbjct: 132 ARNCLVDRDLC-VKVSDFGMTRYVLD--DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 372 FGFGILLLELIT 383
+ FGIL+ E+ +
Sbjct: 189 WAFGILMWEVFS 200
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 99/220 (45%), Gaps = 42/220 (19%)
Query: 203 NFSSKNILGAGGFGNVYK------GKLGDGTVLAVKRLKD----------------MISL 240
N LGAG FG V + GK +AVK LK M L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 241 AVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREK--PALDW------NTRKRIAIG 292
H N++ L+G C L++ Y G + + LR K P L++ N ++++
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLS-- 164
Query: 293 AARGLLYLHEQ--------CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK-LLDHSDSH 343
+R LL+ Q IHRDV A NVLL + A +GDFGLA+ +++ S+
Sbjct: 165 -SRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 223
Query: 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V R V +APE + + ++DV+ +GILL E+ +
Sbjct: 224 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 184 ISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVH 243
+ LG N F+ + E F+ +G G FG V+KG + ++ D+
Sbjct: 11 VDLGT-ENLYFQSMD-PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE 68
Query: 244 ----RNLLRLIGYCATP------------TERLLVYPYMSNGSVASRLREKPALDWNTRK 287
+ + ++ C +P T+ ++ Y+ GS L P LD
Sbjct: 69 IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIA 127
Query: 288 RIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA 347
I +GL YLH + K IHRD+KAANVLL + E + DFG+A L + T
Sbjct: 128 TILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 184
Query: 348 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
V GT +APE + K D++ GI +EL G
Sbjct: 185 V-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 220
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 36/214 (16%)
Query: 203 NFSSKNILGAGGFGNVYK------GKLGDGTVLAVKRLKD----------------MISL 240
N LGAG FG V + GK +AVK LK M L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 241 AVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRK----------RIA 290
H N++ L+G C L++ Y G + + LR K D + +
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK-LLDHSDSHVTTAVR 349
A+G+ +L + IHRDV A NVLL + A +GDFGLA+ +++ S+ V R
Sbjct: 167 SQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 223
Query: 350 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V +APE + + ++DV+ +GILL E+ +
Sbjct: 224 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGD-GTVLAVKRLKD-----------------MISLAVH 243
+NF +LG G FG V ++ + G + AVK LK ++SLA +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 244 RNLLRLIGYC-ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
L + C TP V +++ G + +++ D + A L++LH
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH- 141
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVR-GTVGHIAPEYLS 361
D II+RD+K NVLLD + DFG+ K + + VTTA GT +IAPE L
Sbjct: 142 --DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQ 197
Query: 362 TGQSSEKTDVFGFGILLLELITGMRALE 389
D + G+LL E++ G E
Sbjct: 198 EMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
LG G FG V GK +A+K +K+ M++L+ H L++L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 90
Query: 256 PTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
++ YM+NG + + LRE + + + YL + + +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 147
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L++D V DFGL++ + + + + V PE L + S K+D++ F
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 208 GVLMWEIYS 216
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 97/231 (41%), Gaps = 44/231 (19%)
Query: 208 NILGAGGFGNVYKGKLGD-GTVLAVKRL---------------KDMISLAVHRNLLRLIG 251
+LG G FG K + G V+ +K L K M L H N+L+ IG
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE-HPNVLKFIG 74
Query: 252 YCATPTERLLVYPYMSNGSVASRLREKPA-LDWNTRKRIAIGAARGLLYLHEQCDPKIIH 310
+ Y+ G++ ++ + W+ R A A G+ YLH IIH
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIH 131
Query: 311 RDVKAANVLLDDFCEAIVGDFGLAKL-------------LDHSDSHVTTAVRGTVGHIAP 357
RD+ + N L+ + +V DFGLA+L L D V G +AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 358 EYLSTGQSSEKTDVFGFGILLLELITGM--------RALEFGKSINQKGAM 400
E ++ EK DVF FGI+L E+I + R ++FG +N +G +
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG--LNVRGFL 240
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 40/238 (16%)
Query: 182 GLISLGNLRNF----TFRELQQATENFSSK---------NILGAGGFGNVYKGKLG---- 224
G + L LR F TF + Q F+ + ++GAG FG V G+L
Sbjct: 12 GHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSK 71
Query: 225 DGTVLAVKRLK---------DMISLAV------HRNLLRLIGYCATPTERLLVYPYMSNG 269
+A+K LK D + A H N++RL G ++V M NG
Sbjct: 72 KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENG 131
Query: 270 SVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI 327
S+ S LR+ A + + + + G A G+ YL D +HRD+ A N+L++
Sbjct: 132 SLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCK 187
Query: 328 VGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V DFGL+++L D ++ T + + +PE ++ + + +DV+ +GI+L E+++
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
LG G FG V GK +A+K +K+ M++L+ H L++L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 90
Query: 256 PTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
++ YM+NG + + LRE + + + YL + + +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 147
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L++D V DFGL++ + + + + V PE L + S K+D++ F
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 208 GVLMWEIYS 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVH----RNLLRLIGYCATP- 256
E F+ +G G FG V+KG + ++ D+ + + ++ C +P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 257 -----------TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
T+ ++ Y+ GS L P LD I +GL YLH +
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE-- 123
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
K IHRD+KAANVLL + E + DFG+A L + T V GT +APE +
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAY 181
Query: 366 SEKTDVFGFGILLLELITG 384
K D++ GI +EL G
Sbjct: 182 DSKADIWSLGITAIELARG 200
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 38/204 (18%)
Query: 208 NILGAGGFGNVYKG-KLGDGTVL----AVKRLKD---------------MISLAVHRNLL 247
+LG+G FG VYKG + +G + A+K L + +++ H +L+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KPALDWNTRKRIAIGAARGLLYL 300
RL+G C +PT +L V M +G + + E + L+W + A+G++YL
Sbjct: 104 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 156
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTT-AVRGTVGHIAPEY 359
E+ +++HRD+ A NVL+ + DFGLA+LL+ + + + +A E
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 360 LSTGQSSEKTDVFGFGILLLELIT 383
+ + + ++DV+ +G+ + EL+T
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
LG G FG V GK +A+K +K+ M++L+ H L++L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 74
Query: 256 PTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
++ YM+NG + + LRE + + + YL + + +HRD+
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 131
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L++D V DFGL++ + + + + V PE L + S K+D++ F
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 191
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 192 GVLMWEIYS 200
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 203 NFSSKNILGAGGFGNVYK------GKLGDGTVLAVKRLKD----------------MISL 240
N LGAG FG V + GK +AVK LK M L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 241 AVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKP-ALDWNTRKRIA--IGAARGL 297
H N++ L+G C L++ Y G + + LR K L+ + IA + R L
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDL 166
Query: 298 LYLHEQ--------CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK-LLDHSDSHVTTAV 348
L+ Q IHRDV A NVLL + A +GDFGLA+ +++ S+ V
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE + + ++DV+ +GILL E+ +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 38/204 (18%)
Query: 208 NILGAGGFGNVYKG-KLGDGTVL----AVKRLKD---------------MISLAVHRNLL 247
+LG+G FG VYKG + +G + A+K L + +++ H +L+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KPALDWNTRKRIAIGAARGLLYL 300
RL+G C +PT +L V M +G + + E + L+W + A+G++YL
Sbjct: 81 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 133
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTT-AVRGTVGHIAPEY 359
E+ +++HRD+ A NVL+ + DFGLA+LL+ + + + +A E
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 360 LSTGQSSEKTDVFGFGILLLELIT 383
+ + + ++DV+ +G+ + EL+T
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
LG G FG V GK +A+K +K+ M++L+ H L++L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 75
Query: 256 PTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
++ YM+NG + + LRE + + + YL + + +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 132
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L++D V DFGL++ + + + + V PE L + S K+D++ F
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 193 GVLMWEIYS 201
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 203 NFSSKNILGAGGFGNVYK------GKLGDGTVLAVKRLKD----------------MISL 240
N LGAG FG V + GK +AVK LK M L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 241 AVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIG----AARG 296
H N++ L+G C L++ Y G + + LR K + T AI + R
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV-LETDPAFAIANSTLSTRD 165
Query: 297 LLYLHEQ--------CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK-LLDHSDSHVTTA 347
LL+ Q IHRDV A NVLL + A +GDFGLA+ +++ S+ V
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 348 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
R V +APE + + ++DV+ +GILL E+ +
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
LG G FG V GK +A+K +K+ M++L+ H L++L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 70
Query: 256 PTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
++ YM+NG + + LRE + + + YL + + +HRD+
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 127
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L++D V DFGL++ + + + + V PE L + S K+D++ F
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 187
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 188 GVLMWEIYS 196
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
LG G FG V GK +A+K +K+ M++L+ H L++L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 81
Query: 256 PTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
++ YM+NG + + LRE + + + YL + + +HRD+
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 138
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L++D V DFGL++ + + + + V PE L + S K+D++ F
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 198
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 199 GVLMWEIYS 207
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 35/208 (16%)
Query: 208 NILGAGGFGNVYKGKLG--DGTVLAV------------KRLKDMISLAV------HRNLL 247
ILG G FG+V +G L DGT L V + +++ +S A H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 248 RLIGYCATPTER-----LLVYPYMSNGSV-----ASRLREKPA-LDWNTRKRIAIGAARG 296
RL+G C + + +++ P+M G + SRL P + T + + A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV-RGTVGHI 355
+ YL + +HRD+ A N +L D V DFGL+K + D + + + V I
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 356 APEYLSTGQSSEKTDVFGFGILLLELIT 383
A E L+ + K+DV+ FG+ + E+ T
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 24/202 (11%)
Query: 202 ENFSSKNILGAGGFGNVY-----------------KGKL-GDGTVLAVKRLKDMISLAVH 243
++F LG G FGNVY K +L +G ++R ++ S H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
N+LR+ Y L+ + G + L++ D A L Y HE+
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
K+IHRD+K N+L+ E + DFG + H+ S + GT+ ++ PE +
Sbjct: 135 ---KVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEGK 188
Query: 364 QSSEKTDVFGFGILLLELITGM 385
EK D++ G+L E + GM
Sbjct: 189 THDEKVDLWCAGVLCYEFLVGM 210
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCAT 255
LG G FG V GK +A+K +K+ M++L+ H L++L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTK 75
Query: 256 PTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
++ YM+NG + + LRE + + + YL + + +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 132
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
A N L++D V DFGL++ + + + + V PE L + S K+D++ F
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 375 GILLLELIT 383
G+L+ E+ +
Sbjct: 193 GVLMWEIYS 201
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 24/202 (11%)
Query: 202 ENFSSKNILGAGGFGNVY-----------------KGKL-GDGTVLAVKRLKDMISLAVH 243
++F LG G FGNVY K +L +G ++R ++ S H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
N+LR+ Y L+ + G + L++ D A L Y HE+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
K+IHRD+K N+L+ E + DFG + H+ S + GT+ ++ PE +
Sbjct: 134 ---KVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 364 QSSEKTDVFGFGILLLELITGM 385
EK D++ G+L E + GM
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGM 209
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 24/202 (11%)
Query: 202 ENFSSKNILGAGGFGNVY-----------------KGKL-GDGTVLAVKRLKDMISLAVH 243
++F LG G FGNVY K +L +G ++R ++ S H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
N+LR+ Y L+ + G + L++ D A L Y HE+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
K+IHRD+K N+L+ E + DFG + H+ S + GT+ ++ PE +
Sbjct: 134 ---KVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 364 QSSEKTDVFGFGILLLELITGM 385
EK D++ G+L E + GM
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGM 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S + GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+S+ +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 109/243 (44%), Gaps = 56/243 (23%)
Query: 193 TFRELQQATENFSSKNI-----LGAGGFGNVYK-------GKLGDGTVLAVKRLKDMISL 240
F+ L+ F KN+ LG G FG V K G+ G TV AVK LK+ S
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTV-AVKMLKENASP 67
Query: 241 AVHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------- 277
+ R+LL +L G C+ LL+ Y GS+ LRE
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 278 --------KPALDWNTRKRIAIG--------AARGLLYLHEQCDPKIIHRDVKAANVLLD 321
+LD + + +G ++G+ YL E K++HRD+ A N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVA 184
Query: 322 DFCEAIVGDFGLAKLLDHSDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE 380
+ + + DFGL++ + DS+V + R V +A E L + ++DV+ FG+LL E
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 381 LIT 383
++T
Sbjct: 245 IVT 247
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 49/253 (19%)
Query: 185 SLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMIS 239
S+G N + + TE F +LG+G FG VYKG + +G + A+K L++ S
Sbjct: 2 SMGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
Query: 240 LAVHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE------- 277
++ +L RL+G C T T +L++ M G + +RE
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGS 119
Query: 278 KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337
+ L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 120 QYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
Query: 338 --DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRAL 388
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A
Sbjct: 171 GAEEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
Query: 389 EFGKSINQKGAML 401
E SI +KG L
Sbjct: 230 EIS-SILEKGERL 241
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 87/200 (43%), Gaps = 23/200 (11%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVH----RNLLRLIGYCATP- 256
E F+ +G G FG V+KG + ++ D+ + + ++ C +P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 257 -----------TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
T+ ++ Y+ GS L P LD I +GL YLH +
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE-- 138
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT-TAVRGTVGHIAPEYLSTGQ 364
K IHRD+KAANVLL + E + DFG+A L +D+ + GT +APE +
Sbjct: 139 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSA 195
Query: 365 SSEKTDVFGFGILLLELITG 384
K D++ GI +EL G
Sbjct: 196 YDSKADIWSLGITAIELARG 215
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 26/270 (9%)
Query: 132 GPVPKFPARTFNVAGNPLICGSSSTNVCSGSAN-SVPLSFSLNSSPDKQEEGLISLGNLR 190
GP+PK + + NP GS+ S N L D+Q+ + +
Sbjct: 1 GPMPK--KKPTPIQLNPAPDGSAVNGTSSAETNLEALQKKLLELELDEQQRKRLEAFLTQ 58
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVYK-GKLGDGTVLAVKRLKDMISLAVHRNLLR- 248
EL+ ++F + LGAG G V+K G V+A K + I A+ ++R
Sbjct: 59 KQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE 116
Query: 249 --LIGYCATPT------------ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAA 294
++ C +P E + +M GS+ L++ + +++I
Sbjct: 117 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 176
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+GL YL E+ KI+HRDVK +N+L++ E + DFG++ L DS + V GT +
Sbjct: 177 KGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV-GTRSY 231
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITG 384
++PE L S ++D++ G+ L+E+ G
Sbjct: 232 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 203 NFSSKNILGAGGFGNVYKGKLG----DGTVLAVKRLK---------DMISLAV------H 243
N S ++GAG FG V G+L +A+K LK D + A H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI--GAARGLLYLH 301
N++RL G ++V M NGS+ S LR+ A + + + + G A G+ YL
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLS 135
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEY 359
D +HRD+ A N+L++ V DFGL+++L D ++ T + + +PE
Sbjct: 136 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 360 LSTGQSSEKTDVFGFGILLLELIT 383
++ + + +DV+ +GI+L E+++
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 117/253 (46%), Gaps = 49/253 (19%)
Query: 185 SLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMIS 239
S+G N + + TE F +LG+G FG VYKG + +G +A+K L++ S
Sbjct: 2 SMGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
Query: 240 LAVHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE------- 277
++ +L RL+G C T T +L+ M G + +RE
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGS 119
Query: 278 KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337
+ L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 120 QYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
Query: 338 --DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRAL 388
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A
Sbjct: 171 GAEEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
Query: 389 EFGKSINQKGAML 401
E SI +KG L
Sbjct: 230 EIS-SILEKGERL 241
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 29/200 (14%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK-------------DMISLAVHRNLLR 248
E+ + LGAG FG V+ T +AVK +K +++ H L++
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 241
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGA--ARGLLYLHEQCDP 306
L T ++ +M+ GS+ L+ K I A A G+ ++ ++
Sbjct: 242 LHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR--- 297
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSS 366
IHRD++AAN+L+ + DFGLA++ + + APE ++ G +
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFT 347
Query: 367 EKTDVFGFGILLLELITGMR 386
K+DV+ FGILL+E++T R
Sbjct: 348 IKSDVWSFGILLMEIVTYGR 367
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 27/204 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVK----------RLKDMI-----------SL 240
E + + LG GG VY L + T+L +K R K+ S
Sbjct: 11 ERYKIVDKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQ 67
Query: 241 AVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYL 300
H+N++ +I LV Y+ +++ + L +T G+ +
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
H D +I+HRD+K N+L+D + DFG+AK L + T V GTV + +PE
Sbjct: 128 H---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 361 STGQSSEKTDVFGFGILLLELITG 384
+ E TD++ GI+L E++ G
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVG 208
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 42/232 (18%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRL-----------KDM--ISLAVHRNLLR 248
+N ++G G +G VYKG L + V AVK K++ + L H N+ R
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDERPV-AVKVFSFANRQNFINEKNIYRVPLMEHDNIAR 71
Query: 249 LIGYCATPT-----ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH-- 301
I T E LLV Y NGS+ L + DW + R+A RGL YLH
Sbjct: 72 FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-DWVSSCRLAHSVTRGLAYLHTE 130
Query: 302 ----EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD--------HSDSHVTTAVR 349
+ P I HRD+ + NVL+ + ++ DFGL+ L D+ + V
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV- 189
Query: 350 GTVGHIAPEYLSTG-------QSSEKTDVFGFGILLLELITGMRALEFGKSI 394
GT+ ++APE L + ++ D++ G++ E+ L G+S+
Sbjct: 190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 203 NFSSKNILGAGGFGNVYKGKLG----DGTVLAVKRLK---------DMISLAV------H 243
N S ++GAG FG V G+L +A+K LK D + A H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI--GAARGLLYLH 301
N++RL G ++V M NGS+ S LR+ A + + + + G A G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYL- 163
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEY 359
D +HRD+ A N+L++ V DFGL+++L D ++ T + + +PE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 360 LSTGQSSEKTDVFGFGILLLELIT 383
++ + + +DV+ +GI+L E+++
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 30/216 (13%)
Query: 190 RNFTFRELQQATENFSSKNILGAGGFGNVYKGKL---GDGTV-LAVKRLK---------D 236
R+FT RE++ + + I+G+G G V G+L G V +A+K LK D
Sbjct: 40 RSFT-REIEAS--RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD 96
Query: 237 MISLAV------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
+S A H N++RL G ++V YM NGS+ + LR + + +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQLVG 155
Query: 291 I--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTT 346
+ G G+ YL D +HRD+ A NVL+D V DFGL+++L D ++ TT
Sbjct: 156 MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT 212
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 382
+ + APE ++ S +DV+ FG+++ E++
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S A GT +++PE L+
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 29/202 (14%)
Query: 207 KNILGAGGFGNVYKGKLG----DGTVLAVKRLK---------DMISLAV------HRNLL 247
+ ++GAG FG V G L +A+K LK D +S A H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCD 305
L G T +++ +M NGS+ S LR+ + + + + G A G+ YL D
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYL---AD 127
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGT--VGHIAPEYLS 361
+HR + A N+L++ V DFGL++ L D SD T+A+ G + APE +
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 362 TGQSSEKTDVFGFGILLLELIT 383
+ + +DV+ +GI++ E+++
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS 209
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 21/199 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLAVHRNLLR---LIGYCATPT 257
++F + LGAG G V K + G ++A K + I A+ ++R ++ C +P
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 258 ------------ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
E + +M GS+ L+E + +++I RGL YL E+
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH- 134
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
+I+HRDVK +N+L++ E + DFG++ L DS + V GT ++APE L
Sbjct: 135 -QIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV-GTRSYMAPERLQGTHY 190
Query: 366 SEKTDVFGFGILLLELITG 384
S ++D++ G+ L+EL G
Sbjct: 191 SVQSDIWSMGLSLVELAVG 209
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 87/200 (43%), Gaps = 23/200 (11%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVH----RNLLRLIGYCATP- 256
E F+ +G G FG V+KG + ++ D+ + + ++ C +P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 257 -----------TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
T+ ++ Y+ GS L P LD I +GL YLH +
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE-- 123
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT-TAVRGTVGHIAPEYLSTGQ 364
K IHRD+KAANVLL + E + DFG+A L +D+ + GT +APE +
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSA 180
Query: 365 SSEKTDVFGFGILLLELITG 384
K D++ GI +EL G
Sbjct: 181 YDSKADIWSLGITAIELARG 200
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 182 GLISLG--NLRNFTFRELQQATENFSSKNILGAGGFGNVYKGK---LGD--GTVLAVKRL 234
GL+ G N+ F R L+ + LG G FG+V + L D G V+AVK+L
Sbjct: 13 GLVPRGSHNMTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL 65
Query: 235 K--------------DMISLAVHRNLLRLIGYCATPTER--LLVYPYMSNGSVASRL-RE 277
+ +++ H N+++ G C + R L+ Y+ GS+ L +
Sbjct: 66 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 125
Query: 278 KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337
K +D + +G+ YL + + IHRD+ N+L+++ +GDFGL K+L
Sbjct: 126 KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 182
Query: 338 --DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
D V + APE L+ + S +DV+ FG++L EL T
Sbjct: 183 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 182 GLISLG--NLRNFTFRELQQATENFSSKNILGAGGFGNVYKGK---LGD--GTVLAVKRL 234
GL+ G N+ F R L+ + LG G FG+V + L D G V+AVK+L
Sbjct: 13 GLVPRGSHNMTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL 65
Query: 235 K--------------DMISLAVHRNLLRLIGYCATPTER--LLVYPYMSNGSVASRL-RE 277
+ +++ H N+++ G C + R L+ Y+ GS+ L +
Sbjct: 66 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 125
Query: 278 KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337
K +D + +G+ YL + + IHRD+ N+L+++ +GDFGL K+L
Sbjct: 126 KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 182
Query: 338 --DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
D V + APE L+ + S +DV+ FG++L EL T
Sbjct: 183 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 27/198 (13%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L + K +D + +G+ YL + +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 165
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 225
Query: 366 SEKTDVFGFGILLLELIT 383
S +DV+ FG++L EL T
Sbjct: 226 SVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L + K +D + +G+ YL + +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 133
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 193
Query: 366 SEKTDVFGFGILLLELITGMRA-----LEFGKSI--NQKGAML 401
S +DV+ FG++L EL T + EF + I +++G M+
Sbjct: 194 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 236
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L + K +D + +G+ YL + +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 139
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 199
Query: 366 SEKTDVFGFGILLLELITGMRA-----LEFGKSI--NQKGAML 401
S +DV+ FG++L EL T + EF + I +++G M+
Sbjct: 200 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 242
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 27/198 (13%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L + K +D + +G+ YL + +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 141
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 201
Query: 366 SEKTDVFGFGILLLELIT 383
S +DV+ FG++L EL T
Sbjct: 202 SVASDVWSFGVVLYELFT 219
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVK-------RLKDMISLAV-HRNLLRLI--G 251
+FS I+G GGFG VY + D G + A+K ++K +LA+ R +L L+ G
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 252 YCA----------TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH 301
C TP + + M+ G + L + + A GL ++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
+ +++RD+K AN+LLD+ + D GLA H + GT G++APE L
Sbjct: 310 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQ 363
Query: 362 TGQSSEKT-DVFGFGILLLELITG 384
G + + + D F G +L +L+ G
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L + K +D + +G+ YL + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 134
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 366 SEKTDVFGFGILLLELITGMRA-----LEFGKSI--NQKGAML 401
S +DV+ FG++L EL T + EF + I +++G M+
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 237
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 39/204 (19%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLKD-------------MISLAVHRNLL---R 248
LG G FG+V + LGD G ++AVK+L+ I A+H + + R
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC---- 304
+ Y LV Y+ +G + D+ R R + A+R LLY + C
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLR---------DFLQRHRARLDASRLLLYSSQICKGME 128
Query: 305 ---DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEY 359
+ +HRD+ A N+L++ + DFGLAKL LD V + + APE
Sbjct: 129 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 360 LSTGQSSEKTDVFGFGILLLELIT 383
LS S ++DV+ FG++L EL T
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L + K +D + +G+ YL + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 134
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 366 SEKTDVFGFGILLLELITGMRA-----LEFGKSI--NQKGAML 401
S +DV+ FG++L EL T + EF + I +++G M+
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 237
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVK-------RLKDMISLAV-HRNLLRLI--G 251
+FS I+G GGFG VY + D G + A+K ++K +LA+ R +L L+ G
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 252 YCA----------TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH 301
C TP + + M+ G + L + + A GL ++H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
+ +++RD+K AN+LLD+ + D GLA H + GT G++APE L
Sbjct: 309 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQ 362
Query: 362 TGQSSEKT-DVFGFGILLLELITG 384
G + + + D F G +L +L+ G
Sbjct: 363 KGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L + K +D + +G+ YL + +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 137
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 366 SEKTDVFGFGILLLELITGMRA-----LEFGKSI--NQKGAML 401
S +DV+ FG++L EL T + EF + I +++G M+
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 240
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 36/224 (16%)
Query: 192 FTFRELQQATENFSSK---------NILGAGGFGNVYKGKLG----DGTVLAVKRLK--- 235
FTF + QA F+ + ++G G FG V G+L +A+K LK
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 236 ------DMISLAV------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW 283
D +S A H N++ L G +++ YM NGS+ + LR+ +
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RF 128
Query: 284 NTRKRIAI--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DH 339
+ + + G G+ YL D +HRD+ A N+L++ V DFG++++L D
Sbjct: 129 TVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP 185
Query: 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
++ T + + APE ++ + + +DV+ +GI++ E+++
Sbjct: 186 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L + K +D + +G+ YL + +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 132
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 192
Query: 366 SEKTDVFGFGILLLELITGMRA-----LEFGKSI--NQKGAML 401
S +DV+ FG++L EL T + EF + I +++G M+
Sbjct: 193 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 235
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 27/198 (13%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L + K +D + +G+ YL + +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 140
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 200
Query: 366 SEKTDVFGFGILLLELIT 383
S +DV+ FG++L EL T
Sbjct: 201 SVASDVWSFGVVLYELFT 218
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 39/204 (19%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLKD-------------MISLAVHRNLL---R 248
LG G FG+V + LGD G ++AVK+L+ I A+H + + R
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD--- 305
+ Y LV Y+ +G + D+ R R + A+R LLY + C
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLR---------DFLQRHRARLDASRLLLYSSQICKGME 129
Query: 306 ----PKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEY 359
+ +HRD+ A N+L++ + DFGLAKL LD V + + APE
Sbjct: 130 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 360 LSTGQSSEKTDVFGFGILLLELIT 383
LS S ++DV+ FG++L EL T
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 38/204 (18%)
Query: 208 NILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMISLAVHRNLL--------------- 247
+LG+G FG VYKG + DG +A+K L++ S ++ +L
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KPALDWNTRKRIAIGAARGLLYL 300
RL+G C T T +L V M G + +RE + L+W + A+G+ YL
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYL 135
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV-TTAVRGTVGHIAPEY 359
D +++HRD+ A NVL+ + DFGLA+LLD ++ + + +A E
Sbjct: 136 E---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 360 LSTGQSSEKTDVFGFGILLLELIT 383
+ + + ++DV+ +G+ + EL+T
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L + K +D + +G+ YL + +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 138
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 198
Query: 366 SEKTDVFGFGILLLELITGMRA-----LEFGKSI--NQKGAML 401
S +DV+ FG++L EL T + EF + I +++G M+
Sbjct: 199 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 241
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 39/204 (19%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLKD-------------MISLAVHRNLL---R 248
LG G FG+V + LGD G ++AVK+L+ I A+H + + R
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC---- 304
+ Y LV Y+ +G + D+ R R + A+R LLY + C
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLR---------DFLQRHRARLDASRLLLYSSQICKGME 141
Query: 305 ---DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEY 359
+ +HRD+ A N+L++ + DFGLAKL LD V + + APE
Sbjct: 142 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 360 LSTGQSSEKTDVFGFGILLLELIT 383
LS S ++DV+ FG++L EL T
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 190 RNFTFRELQQATENFSSKNILGAGGFGNVYKGKLG------------------DGTVLAV 231
R+FT ++F LG G FGNVY + +G +
Sbjct: 18 RHFTI-------DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQL 70
Query: 232 KRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI 291
+R ++ + H N+LRL Y L+ Y G + L++ D I
Sbjct: 71 RREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIME 130
Query: 292 GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT 351
A L+Y H + K+IHRD+K N+LL E + DFG + H+ S + GT
Sbjct: 131 ELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSV---HAPSLRRKTMCGT 184
Query: 352 VGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ ++ PE + +EK D++ G+L EL+ G
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVK-------RLKDMISLAV-HRNLLRLI--G 251
+FS I+G GGFG VY + D G + A+K ++K +LA+ R +L L+ G
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 252 YCA----------TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH 301
C TP + + M+ G + L + + A GL ++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
+ +++RD+K AN+LLD+ + D GLA H + GT G++APE L
Sbjct: 310 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQ 363
Query: 362 TGQSSEKT-DVFGFGILLLELITG 384
G + + + D F G +L +L+ G
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 28/204 (13%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVK-------RLKDMISLAV-HRNLLRLI--G 251
+FS I+G GGFG VY + D G + A+K ++K +LA+ R +L L+ G
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 252 YCA----------TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH 301
C TP + + M+ G + L + + A GL ++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
+ +++RD+K AN+LLD+ + D GLA H + GT G++APE L
Sbjct: 310 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQ 363
Query: 362 TGQSSEKT-DVFGFGILLLELITG 384
G + + + D F G +L +L+ G
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 56/243 (23%)
Query: 193 TFRELQQATENFSSKNI-----LGAGGFGNVYK-------GKLGDGTVLAVKRLKDMISL 240
F+ L+ F KN+ LG G FG V K G+ G TV AVK LK+ S
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTV-AVKMLKENASP 67
Query: 241 AVHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------- 277
+ R+LL +L G C+ LL+ Y GS+ LRE
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 278 --------KPALDWNTRKRIAIG--------AARGLLYLHEQCDPKIIHRDVKAANVLLD 321
+LD + + +G ++G+ YL E K++HRD+ A N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVA 184
Query: 322 DFCEAIVGDFGLAKLLDHSDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE 380
+ + + DFGL++ + DS V + R V +A E L + ++DV+ FG+LL E
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 381 LIT 383
++T
Sbjct: 245 IVT 247
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 49/253 (19%)
Query: 185 SLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMIS 239
++G N + + TE F +LG+G FG VYKG + +G +A+K L++ S
Sbjct: 2 AMGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
Query: 240 LAVHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE------- 277
++ +L RL+G C T T +L+ M G + +RE
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGS 119
Query: 278 KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337
+ L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 120 QYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
Query: 338 --DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRAL 388
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A
Sbjct: 171 GAEEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
Query: 389 EFGKSINQKGAML 401
E SI +KG L
Sbjct: 230 EIS-SILEKGERL 241
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 197 LQQATENFSSKNILGAGGFGNVYK-GKLGDGTVLAVKRLKDMISLAVHRNLLR---LIGY 252
++ ++F + LGAG G V+K G V+A K + I A+ ++R ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 253 CATPT------------ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYL 300
C +P E + +M GS+ L++ + +++I +GL YL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
E+ KI+HRDVK +N+L++ E + DFG++ L S + + GT +++PE L
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERL 175
Query: 361 STGQSSEKTDVFGFGILLLELITG 384
S ++D++ G+ L+E+ G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S + GT +++PE L+
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 252
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 49/253 (19%)
Query: 185 SLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMIS 239
++G N + + TE F +LG+G FG VYKG + +G +A+K L++ S
Sbjct: 2 AMGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
Query: 240 LAVHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE------- 277
++ +L RL+G C T T +L+ M G + +RE
Sbjct: 61 PKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGS 119
Query: 278 KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337
+ L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 120 QYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
Query: 338 --DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRAL 388
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A
Sbjct: 171 GAEEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 229
Query: 389 EFGKSINQKGAML 401
E SI +KG L
Sbjct: 230 EIS-SILEKGERL 241
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 197 LQQATENFSSKNILGAGGFGNVYK-GKLGDGTVLAVKRLKDMISLAVHRNLLR---LIGY 252
++ ++F + LGAG G V+K G V+A K + I A+ ++R ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 253 CATPT------------ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYL 300
C +P E + +M GS+ L++ + +++I +GL YL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
E+ KI+HRDVK +N+L++ E + DFG++ L S + + GT +++PE L
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERL 175
Query: 361 STGQSSEKTDVFGFGILLLELITG 384
S ++D++ G+ L+E+ G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 208 NILGAGGFGNVYKGKLG-DGTVLAVKRL--KDMISLAV---------------HRNLLRL 249
+ LG G FG V GK G +AVK L + + SL V H ++++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 250 IGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKII 309
+TP++ +V Y+S G + + + LD +R+ G+ Y H ++
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM---VV 138
Query: 310 HRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG-QSSEK 368
HRD+K NVLLD A + DFGL+ ++ SD G+ + APE +S + +
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRXSCGSPNYAAPEVISGRLYAGPE 196
Query: 369 TDVFGFGILLLELITG 384
D++ G++L L+ G
Sbjct: 197 VDIWSSGVILYALLCG 212
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 197 LQQATENFSSKNILGAGGFGNVYK-GKLGDGTVLAVKRLKDMISLAVHRNLLR---LIGY 252
++ ++F + LGAG G V+K G V+A K + I A+ ++R ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 253 CATPT------------ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYL 300
C +P E + +M GS+ L++ + +++I +GL YL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
E+ KI+HRDVK +N+L++ E + DFG++ L S + + GT +++PE L
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERL 175
Query: 361 STGQSSEKTDVFGFGILLLELITG 384
S ++D++ G+ L+E+ G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 24/227 (10%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMIS 239
++ E+F ILG G F V + + + V V R +D++S
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H ++L + Y NG + +R+ + D + L Y
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 125
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPE 358
LH + IIHRD+K N+LL++ + DFG AK+L S GT +++PE
Sbjct: 126 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 359 YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
L+ + + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 229
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 190 RNFTFRELQQATENFSSKNILGAGGFGNVYKGKL---GDGTV-LAVKRLK---------D 236
R+FT RE++ + + I+G+G G V G+L G V +A+K LK D
Sbjct: 40 RSFT-REIEAS--RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD 96
Query: 237 MISLAV------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
+S A H N++RL G ++V YM NGS+ + LR + + +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQLVG 155
Query: 291 I--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTT 346
+ G G+ YL D +HRD+ A NVL+D V DFGL+++L D + TT
Sbjct: 156 MLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTT 212
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 382
+ + APE ++ S +DV+ FG+++ E++
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 21/199 (10%)
Query: 202 ENFSSKNILGAGGFGNVYK-GKLGDGTVLAVKRLKDMISLAVHRNLLR---LIGYCATPT 257
++F + LGAG G V+K G V+A K + I A+ ++R ++ C +P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 258 ------------ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
E + +M GS+ L++ + +++I +GL YL E+
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH- 151
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
KI+HRDVK +N+L++ E + DFG++ L DS + V GT +++PE L
Sbjct: 152 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV-GTRSYMSPERLQGTHY 207
Query: 366 SEKTDVFGFGILLLELITG 384
S ++D++ G+ L+E+ G
Sbjct: 208 SVQSDIWSMGLSLVEMAVG 226
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGD-GTVLAVKRLK--------DMISLAVHRNL 246
+++ E+F +LG G FG V+ + A+K LK D+ V + +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 247 LRLIG--------YCATPTER--LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
L L +C T+ V Y++ G + ++ D + A G
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 131
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L +LH + I++RD+K N+LLD + DFG+ K D+ T GT +IA
Sbjct: 132 LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPDYIA 187
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITG 384
PE L + + D + FG+LL E++ G
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIG 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 184 ISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYK-GKLGDGTVLAVKRLKDMISLAV 242
++LG L++ F ++ + LGAG G V+K G V+A K + I A+
Sbjct: 1 MALGELKDDDFEKISE----------LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI 50
Query: 243 HRNLLR---LIGYCATPT------------ERLLVYPYMSNGSVASRLREKPALDWNTRK 287
++R ++ C +P E + +M GS+ L++ +
Sbjct: 51 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 110
Query: 288 RIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLA-KLLDHSDSHVTT 346
+++I +GL YL E+ KI+HRDVK +N+L++ E + DFG++ +L+D +
Sbjct: 111 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMAN 164
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT +++PE L S ++D++ G+ L+E+ G
Sbjct: 165 EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 197 LQQATENFSSKNILGAGGFGNVYK-GKLGDGTVLAVKRLKDMISLAVHRNLLR---LIGY 252
++ ++F + LGAG G V+K G V+A K + I A+ ++R ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 253 CATPT------------ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYL 300
C +P E + +M GS+ L++ + +++I +GL YL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
E+ KI+HRDVK +N+L++ E + DFG++ L S + + GT +++PE L
Sbjct: 121 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERL 175
Query: 361 STGQSSEKTDVFGFGILLLELITG 384
S ++D++ G+ L+E+ G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 197 LQQATENFSSKNILGAGGFGNVYK-GKLGDGTVLAVKRLKDMISLAVHRNLLR---LIGY 252
++ ++F + LGAG G V+K G V+A K + I A+ ++R ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 253 CATPT------------ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYL 300
C +P E + +M GS+ L++ + +++I +GL YL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
E+ KI+HRDVK +N+L++ E + DFG++ L S + + GT +++PE L
Sbjct: 121 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERL 175
Query: 361 STGQSSEKTDVFGFGILLLELITG 384
S ++D++ G+ L+E+ G
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 24/227 (10%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMIS 239
++ E+F ILG G F V + + + V V R +D++S
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H ++L + Y NG + +R+ + D + L Y
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 124
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPE 358
LH + IIHRD+K N+LL++ + DFG AK+L S GT +++PE
Sbjct: 125 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 359 YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
L+ + + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 228
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 29/202 (14%)
Query: 207 KNILGAGGFGNVYKGKLG----DGTVLAVKRLK---------DMISLAV------HRNLL 247
+ ++GAG FG V +G+L + +A+K LK + +S A H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCD 305
RL G +++ +M NG++ S LR + + + + G A G+ YL E
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDG-QFTVIQLVGMLRGIASGMRYLAEM-- 135
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH--SDSHVTTAVRGT--VGHIAPEYLS 361
+HRD+ A N+L++ V DFGL++ L+ SD T+++ G + APE ++
Sbjct: 136 -SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 362 TGQSSEKTDVFGFGILLLELIT 383
+ + +D + +GI++ E+++
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMS 216
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 155 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 254
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 24/227 (10%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMIS 239
++ E+F ILG G F V + + + V V R +D++S
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H ++L + Y NG + +R+ + D + L Y
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 123
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPE 358
LH + IIHRD+K N+LL++ + DFG AK+L S GT +++PE
Sbjct: 124 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 359 YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
L+ + + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S + GT +++PE L+
Sbjct: 149 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 248
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G +A+K L++ S
Sbjct: 5 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 63
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L++ M G + +RE +
Sbjct: 64 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQY 122
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 123 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 173
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 174 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 232
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 233 S-SILEKGERL 242
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G + A+K L++ S
Sbjct: 2 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 60
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L++ M G + +RE +
Sbjct: 61 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 119
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 120 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 171 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 229
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 230 S-SILEKGERL 239
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 24/227 (10%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMIS 239
++ E+F ILG G F V + + + V V R +D++S
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 240 LAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
H ++L + Y NG + +R+ + D + L Y
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 122
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPE 358
LH + IIHRD+K N+LL++ + DFG AK+L S GT +++PE
Sbjct: 123 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 359 YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
L+ + + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 226
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 252
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 26/198 (13%)
Query: 208 NILGAGGFGNVYKG--------------------KLGDGTVLAVKRLKDMISLAVHRNLL 247
+LG+G FG V+KG K G + AV I H +++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDP 306
RL+G C + +L V Y+ GS+ +R+ + AL + A+G+ YL E
Sbjct: 97 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH--- 152
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQS 365
++HR++ A NVLL + V DFG+A LL D + + + + +A E + G+
Sbjct: 153 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 212
Query: 366 SEKTDVFGFGILLLELIT 383
+ ++DV+ +G+ + EL+T
Sbjct: 213 THQSDVWSYGVTVWELMT 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G + A+K L++ S
Sbjct: 2 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 60
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L++ M G + +RE +
Sbjct: 61 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQY 119
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 120 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 171 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 229
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 230 S-SILEKGERL 239
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G +A+K L++ S
Sbjct: 1 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 59
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L++ M G + +RE +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 118
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 119 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 170 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 229 S-SILEKGERL 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 251
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G +A+K L++ S
Sbjct: 3 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 61
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L++ M G + +RE +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 120
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 121 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 172 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 231 S-SILEKGERL 240
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGD-GTVLAVKRLKDMISLA--------VHRNL 246
+++ E+F +LG G FG V+ + A+K LK + L V + +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 247 LRLIG--------YCATPTER--LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
L L +C T+ V Y++ G + ++ D + A G
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 130
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L +LH + I++RD+K N+LLD + DFG+ K D+ T GT +IA
Sbjct: 131 LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPDYIA 186
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITG 384
PE L + + D + FG+LL E++ G
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIG 214
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 26/198 (13%)
Query: 208 NILGAGGFGNVYKG--------------------KLGDGTVLAVKRLKDMISLAVHRNLL 247
+LG+G FG V+KG K G + AV I H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDP 306
RL+G C + +L V Y+ GS+ +R+ + AL + A+G+ YL E
Sbjct: 79 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH--- 134
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQS 365
++HR++ A NVLL + V DFG+A LL D + + + + +A E + G+
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194
Query: 366 SEKTDVFGFGILLLELIT 383
+ ++DV+ +G+ + EL+T
Sbjct: 195 THQSDVWSYGVTVWELMT 212
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 185 SLGNLRNFTFRELQQATEN-FSSKNILGAGGFGNVYKGKLGDGT--VLAVKRLK------ 235
S+ +LR F + + E F+ + +G G FG VYKG + + T V+A+K +
Sbjct: 1 SMAHLRGFANQHSRVDPEELFTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAED 59
Query: 236 ---------DMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTR 286
++S + R G T+ ++ Y+ GS L+ P L+
Sbjct: 60 EIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP-LEETYI 118
Query: 287 KRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT- 345
I +GL YLH + + IHRD+KAANVLL + + + DFG+A L +D+ +
Sbjct: 119 ATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKR 173
Query: 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT +APE + K D++ GI +EL G
Sbjct: 174 NXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 27/198 (13%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L + K +D + +G+ YL + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 134
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 366 SEKTDVFGFGILLLELIT 383
S +DV+ FG++L EL T
Sbjct: 195 SVASDVWSFGVVLYELFT 212
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 21/199 (10%)
Query: 202 ENFSSKNILGAGGFGNVYK-GKLGDGTVLAVKRLKDMISLAVHRNLLR---LIGYCATPT 257
++F + LGAG G V+K G V+A K + I A+ ++R ++ C +P
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 258 ------------ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
E + +M GS+ L++ + +++I +GL YL E+
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK-- 142
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
KI+HRDVK +N+L++ E + DFG++ L DS + V GT +++PE L
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV-GTRSYMSPERLQGTHY 199
Query: 366 SEKTDVFGFGILLLELITG 384
S ++D++ G+ L+E+ G
Sbjct: 200 SVQSDIWSMGLSLVEMAVG 218
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 243 HRNLLRLIGY----CATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLL 298
H N+L+ IG + + L+ + GS++ L+ + WN IA ARGL
Sbjct: 77 HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLA 135
Query: 299 YLHEQC-------DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVR-G 350
YLHE P I HRD+K+ NVLL + A + DFGLA + S T + G
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG 195
Query: 351 TVGHIAPEYLSTGQSSE-----KTDVFGFGILLLEL 381
T ++APE L + + + D++ G++L EL
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 116/254 (45%), Gaps = 49/254 (19%)
Query: 184 ISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMI 238
I G N + + TE F +LG+G FG VYKG + +G + A+K L++
Sbjct: 5 IRSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 63
Query: 239 SLAVHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE------ 277
S ++ +L RL+G C T T +L+ M G + +RE
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIG 122
Query: 278 -KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336
+ L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKL
Sbjct: 123 SQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
Query: 337 L--DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRA 387
L + + H + + +A E + + ++DV+ +G+ + EL+T G+ A
Sbjct: 174 LGAEEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 232
Query: 388 LEFGKSINQKGAML 401
E SI +KG L
Sbjct: 233 SEIS-SILEKGERL 245
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ ++ GS+ L + K +D + +G+ YL + +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 137
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 366 SEKTDVFGFGILLLELITGMRA-----LEFGKSI--NQKGAML 401
S +DV+ FG++L EL T + EF + I +++G M+
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 240
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G +A+K L++ S
Sbjct: 1 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 59
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L+ M G + +RE +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 118
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 119 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 170 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 229 S-SILEKGERL 238
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 29/202 (14%)
Query: 207 KNILGAGGFGNVYKGKLG----DGTVLAVKRLK---------DMISLAV------HRNLL 247
+ ++GAG FG V +G+L + +A+K LK + +S A H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCD 305
RL G +++ +M NG++ S LR + + + + G A G+ YL E
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDG-QFTVIQLVGMLRGIASGMRYLAEM-- 137
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH--SDSHVTTAVRGT--VGHIAPEYLS 361
+HRD+ A N+L++ V DFGL++ L+ SD T+++ G + APE ++
Sbjct: 138 -SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 362 TGQSSEKTDVFGFGILLLELIT 383
+ + +D + +GI++ E+++
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMS 218
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G + A+K L++ S
Sbjct: 1 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 59
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L+ M G + +RE +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQY 118
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 119 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 170 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 229 S-SILEKGERL 238
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G +A+K L++ S
Sbjct: 3 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 61
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L+ M G + +RE +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 120
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 121 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 172 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 231 S-SILEKGERL 240
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 134 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 233
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 48/235 (20%)
Query: 203 NFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMISLAVHRNLL---------- 247
F +LG+G FG VYKG + +G + A+K L++ S ++ +L
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 248 -----RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KPALDWNTRKRIAIGAAR 295
RL+G C T T +L+ M G + +RE + L+W + A+
Sbjct: 86 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 138
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVG 353
G+ YL D +++HRD+ A NVL+ + DFGLAKLL + + H + +
Sbjct: 139 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 194
Query: 354 HIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEFGKSINQKGAML 401
+A E + + ++DV+ +G+ + EL+T G+ A E SI +KG L
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 248
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G + A+K L++ S
Sbjct: 7 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 65
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L+ M G + +RE +
Sbjct: 66 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 124
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 125 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 175
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 176 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 234
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 235 S-SILEKGERL 244
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G + A+K L++ S
Sbjct: 26 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 84
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L+ M G + +RE +
Sbjct: 85 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 143
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 144 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 194
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 195 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 253
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 254 S-SILEKGERL 263
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G + A+K L++ S
Sbjct: 1 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 59
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L+ M G + +RE +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 118
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 119 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 170 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 229 S-SILEKGERL 238
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 149 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 248
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 91/213 (42%), Gaps = 37/213 (17%)
Query: 208 NILGAGGFGNVYKGKL-GDGTVLAVKRLKDMISLAV-----------HRNLLRLIGY--- 252
I G FG V+K +L D + + L+D S H NLL+ I
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKR 80
Query: 253 -CATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC------- 304
E L+ + GS+ L+ + WN +A +RGL YLHE
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYLKGN-IITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 305 -DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD----HSDSHVTTAVRGTVGHIAPEY 359
P I HRD K+ NVLL A++ DFGLA + D+H GT ++APE
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYMAPEV 196
Query: 360 LSTGQSSE-----KTDVFGFGILLLELITGMRA 387
L + + + D++ G++L EL++ +A
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVSRCKA 229
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 56/243 (23%)
Query: 193 TFRELQQATENFSSKNI-----LGAGGFGNVYK-------GKLGDGTVLAVKRLKDMISL 240
F+ L+ F KN+ LG G FG V K G+ G TV AVK LK+ S
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTV-AVKMLKENASP 67
Query: 241 AVHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLREK------- 278
+ R+LL +L G C+ LL+ Y GS+ LRE
Sbjct: 68 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 279 ---------PALDWNTRKRIAIG--------AARGLLYLHEQCDPKIIHRDVKAANVLLD 321
+LD + + +G ++G+ YL E ++HRD+ A N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVA 184
Query: 322 DFCEAIVGDFGLAKLLDHSDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE 380
+ + + DFGL++ + DS V + R V +A E L + ++DV+ FG+LL E
Sbjct: 185 EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 244
Query: 381 LIT 383
++T
Sbjct: 245 IVT 247
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 26/203 (12%)
Query: 203 NFSSKNILGAGGFGNVY---------KGKLGDGTVL--AVKRLKDMISLAVHRNLLRLIG 251
+F +LG G FG V+ G L VL A +++D + + R++L +
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 252 Y---------CATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
+ T + L+ ++ G + +RL ++ K A GL +LH
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK-LLDHSDSHVTTAVRGTVGHIAPEYLS 361
II+RD+K N+LLD+ + DFGL+K +DH + GTV ++APE ++
Sbjct: 149 LG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC--GTVEYMAPEVVN 203
Query: 362 TGQSSEKTDVFGFGILLLELITG 384
S D + +G+L+ E++TG
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTG 226
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 251 GYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L + K +D + +G+ YL + +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 135
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTGQS 365
IHR++ N+L+++ +GDFGL K+L + G + APE L+ +
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF 195
Query: 366 SEKTDVFGFGILLLELITGMRA-----LEFGKSI--NQKGAML 401
S +DV+ FG++L EL T + EF + I +++G M+
Sbjct: 196 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 238
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 48/235 (20%)
Query: 203 NFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMISLAVHRNLL---------- 247
F +LG+G FG VYKG + +G + A+K L++ S ++ +L
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 248 -----RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KPALDWNTRKRIAIGAAR 295
RL+G C T T +L+ M G + +RE + L+W + A+
Sbjct: 70 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 122
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVG 353
G+ YL D +++HRD+ A NVL+ + DFGLAKLL + + H + +
Sbjct: 123 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 178
Query: 354 HIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEFGKSINQKGAML 401
+A E + + ++DV+ +G+ + EL+T G+ A E SI +KG L
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 232
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 63/245 (25%)
Query: 203 NFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-----------DMISLAV--HRNLLR 248
+F +LG G FG V K + D A+K+++ +++ LA H+ ++R
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 249 LIGYCATPTERLLVYP---------------YMSNGSV-----ASRLREKPALDWNTRKR 288
Y A R V P Y NG++ + L ++ W ++
Sbjct: 67 Y--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS------DS 342
I L Y+H Q IIHRD+K N+ +D+ +GDFGLAK + S DS
Sbjct: 125 IL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 343 H--------VTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGILLLELI----TGMRALE 389
+T+A+ GT ++A E L TG +EK D++ GI+ E+I TGM +
Sbjct: 178 QNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVN 236
Query: 390 FGKSI 394
K +
Sbjct: 237 ILKKL 241
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 34/223 (15%)
Query: 210 LGAGGFGNVYKGK---LGD--GTVLAVKRLK--------------DMISLAVHRNLLRLI 250
LG G FG+V + L D G V+AVK+L+ +++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 251 GYCATPTER--LLVYPYMSNGSVASRLR-EKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C + R L+ Y+ GS+ L+ +D + +G+ YL + +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTK---R 137
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
IHRD+ N+L+++ +GDFGL K+L D V + APE L+ +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 366 SEKTDVFGFGILLLELITGMRA-----LEFGKSI--NQKGAML 401
S +DV+ FG++L EL T + EF + I +++G M+
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 240
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 24/223 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F + + + V V R +D++S H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 363 GQSSEKTDVFGFGILLLELITGMRALEFGKS--INQKGAMLEW 403
+ + +D++ G ++ +L+ G+ G I QK LE+
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY 249
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 150
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 151 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 206 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 260
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 261 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 151
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASYYRKGGCA 206
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 261
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 262 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 165
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 275
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 276 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 48/235 (20%)
Query: 203 NFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMISLAVHRNLL---------- 247
F +LG+G FG VYKG + +G +A+K L++ S ++ +L
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 248 -----RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KPALDWNTRKRIAIGAAR 295
RL+G C T T +L+ M G + +RE + L+W + A
Sbjct: 73 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAE 125
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVG 353
G+ YL D +++HRD+ A NVL+ + DFGLAKLL + + H + +
Sbjct: 126 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 181
Query: 354 HIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEFGKSINQKGAML 401
+A E + + ++DV+ +G+ + EL+T G+ A E SI +KG L
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 235
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 151
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASYYRKGGCA 206
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 261
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 262 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 150
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 151 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASYYRKGGCA 205
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 206 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 260
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 261 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 142
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 143 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASYYRKGGCA 197
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 198 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 252
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 253 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 165
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 275
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 276 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 49/257 (19%)
Query: 181 EGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLK 235
E L G N + + TE F +LG+G FG VYKG + +G +A+ L+
Sbjct: 29 EPLTPSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELR 87
Query: 236 DMISLAVHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE--- 277
+ S ++ +L RL+G C T T +L+ M G + +RE
Sbjct: 88 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKD 146
Query: 278 ----KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGL 333
+ L+W + A+G+ YL D +++HRD+ A NVL+ + DFGL
Sbjct: 147 NIGSQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL 197
Query: 334 AKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------G 384
AKLL + + H + + +A E + + ++DV+ +G+ + EL+T G
Sbjct: 198 AKLLGAEEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 256
Query: 385 MRALEFGKSINQKGAML 401
+ A E SI +KG L
Sbjct: 257 IPASEIS-SILEKGERL 272
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 49/254 (19%)
Query: 184 ISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMI 238
I G N + + TE F +L +G FG VYKG + +G + A+K L++
Sbjct: 5 IRSGEAPNQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 63
Query: 239 SLAVHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE------ 277
S ++ +L RL+G C T T +L++ M G + +RE
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIG 122
Query: 278 -KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336
+ L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKL
Sbjct: 123 SQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
Query: 337 L--DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRA 387
L + + H + + +A E + + ++DV+ +G+ + EL+T G+ A
Sbjct: 174 LGAEEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 232
Query: 388 LEFGKSINQKGAML 401
E SI +KG L
Sbjct: 233 SEIS-SILEKGERL 245
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 151
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMAQDIYRASYYRKGGCA 206
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 261
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 262 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 165
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASYYRKGGCA 220
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 275
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 276 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDGT--VLAVKRLK---------------DMISLAVHR 244
E F+ +G G FG V+KG + + T V+A+K + ++S
Sbjct: 23 ELFTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
+ + G ++ ++ Y+ GS LR P ++ + +GL YLH +
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-EILKGLDYLHSE- 139
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
K IHRD+KAANVLL + + + DFG+A L + T V GT +APE +
Sbjct: 140 --KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSA 196
Query: 365 SSEKTDVFGFGILLLELITG 384
K D++ GI +EL G
Sbjct: 197 YDSKADIWSLGITAIELAKG 216
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 157
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 158 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASYYRKGGCA 212
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 213 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 267
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 268 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 363 GQSSEKTDVFGFGILLLELITGM 385
+ + +D++ G ++ +L+ G+
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGL 231
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 167
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 168 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASYYRKGGCA 222
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 223 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 277
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 278 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------------LGDGTVLAVKRLKDMISLAVH 243
E+F ILG G F V + + + V V R +D++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
++L + Y NG + +R+ + D + L YLH +
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLST 362
IIHRD+K N+LL++ + DFG AK+L S GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 363 GQSSEKTDVFGFGILLLELITGM 385
+ + +D++ G ++ +L+ G+
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGL 231
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 114/292 (39%), Gaps = 60/292 (20%)
Query: 202 ENFSSKNILGAGGFGNVYKGKL--------------GDGTVLAVKRLKDMISLAVHRNLL 247
E ++G G FG VY G+ + + A KR H N++
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDP 306
+G C +P ++ ++ S +R+ K LD N ++IA +G+ YLH +
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG-- 150
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVR---------GTVGHIAP 357
I+H+D+K+ NV D+ + ++ DFGL S S V A R G + H+AP
Sbjct: 151 -ILHKDLKSKNVFYDN-GKVVITDFGL-----FSISGVLQAGRREDKLRIQNGWLCHLAP 203
Query: 358 EY---LSTGQSSEK------TDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
E LS +K +DVF G + EL EW
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL-----------------HAREWPFKTQ 246
Query: 409 XXXXXXXXXDRELGSNYDRIEVG-EILQVALLCTQYLPVHRPKMSEVVRMLE 459
+ N +I +G EI + L C + RP ++++ MLE
Sbjct: 247 PAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 191
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 192 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 246
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 247 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 301
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 302 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 168
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 169 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRAGYYRKGGCA 223
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 224 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 278
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 279 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 119/293 (40%), Gaps = 73/293 (24%)
Query: 210 LGAGGFGNVYKGKLG----DGTVL--AVKRLKD---------------MISLAVHRNLLR 248
LG G FG VY+G++ D + L AVK L + +IS H+N++R
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR--------------IAIGAA 294
IG R ++ M+ G + S LRE TR R +A A
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRE-------TRPRPSQPSSLAMLDLLHVARDIA 177
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSDSHVTTAVR 349
G YL E IHRD+ A N LL C A +GDFG+A+ + + +
Sbjct: 178 CGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDIYRASYYRKGGCA 232
Query: 350 G-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
V + PE G + KTD + FG+LL E+ + + + + NQ+ +LE+
Sbjct: 233 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQE--VLEFVTS-- 287
Query: 409 XXXXXXXXXDRELGSNYDRIE--VGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
G D + G + ++ C Q+ P RP + ++ +E
Sbjct: 288 -------------GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 209 ILGAGGFGNVYKGK-LGDGTVLAVKRLKDMIS---------LAVHRNLLR--LIGYCATP 256
+LG G +G VY G+ L + +A+K + + S +A+H++L ++ Y +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 257 TERLLVYPYMSN---GSVASRLREKPALDWNTRKRIAIGAAR---GLLYLHEQCDPKIIH 310
+E + +M GS+++ LR K + + I + GL YLH D +I+H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 145
Query: 311 RDVKAANVLLDDFCEAI-VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQS--SE 367
RD+K NVL++ + + + DFG +K L + T GT+ ++APE + G +
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 368 KTDVFGFGILLLELITG 384
D++ G ++E+ TG
Sbjct: 205 AADIWSLGCTIIEMATG 221
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 193 TFRELQQATENFSSK---------NILGAGGFGNVYKGKL---GDGTV-LAVKRLK---- 235
T+ + QA F+ + ++GAG FG V G+L G + +A+K LK
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 236 -----DMISLAV------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWN 284
D + A H N++ L G ++V YM NGS+ + L++ +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG-QFT 122
Query: 285 TRKRIAI--GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHS 340
+ + + G + G+ YL D +HRD+ A N+L++ V DFGL+++L D
Sbjct: 123 VIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 179
Query: 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAM 400
++ T + + APE ++ + + +DV+ +GI++ E+++ G
Sbjct: 180 AAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS-------------YGER 226
Query: 401 LEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
W R L S D + Q+ L C Q RPK E+V ML+
Sbjct: 227 PYWEMTNQDVIKAVEEGYR-LPSPMDC--PAALYQLMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G + A+K L++ S
Sbjct: 3 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 61
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L++ M G + +RE +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 120
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFG AKLL
Sbjct: 121 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 172 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 231 S-SILEKGERL 240
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 94/227 (41%), Gaps = 49/227 (21%)
Query: 203 NFSSKNILGAGGFGNVYK------GKLGDGTVLAVKRLKD----------------MISL 240
N LGAG FG V + GK +AVK LK M L
Sbjct: 32 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 91
Query: 241 AVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKP---------------ALDWNT 285
H N++ L+G C L++ Y G + + LR K LD
Sbjct: 92 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED 151
Query: 286 RKRIAIGAARGLLYLHEQ--------CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK-L 336
+ + + R LL+ Q IHRDV A NVLL + A +GDFGLA+ +
Sbjct: 152 GRPLEL---RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 208
Query: 337 LDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
++ S+ V R V +APE + + ++DV+ +GILL E+ +
Sbjct: 209 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 48/235 (20%)
Query: 203 NFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMISLAVHRNLL---------- 247
F +LG+G FG VYKG + +G +A+K L++ S ++ +L
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 248 -----RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KPALDWNTRKRIAIGAAR 295
RL+G C T T +L++ M G + +RE + L+W + A+
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAK 132
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVG 353
G+ YL D +++HRD+ A NVL+ + DFG AKLL + + H + +
Sbjct: 133 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIK 188
Query: 354 HIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEFGKSINQKGAML 401
+A E + + ++DV+ +G+ + EL+T G+ A E SI +KG L
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 242
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMISLA 241
G N + + TE F +L +G FG VYKG + +G +A+K L++ S
Sbjct: 1 GEAPNQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 59
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L+ M G + +RE +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 118
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKLL
Sbjct: 119 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 170 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 229 S-SILEKGERL 238
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G + A+K L++ S
Sbjct: 3 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 61
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L++ M G + +RE +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 120
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFG AKLL
Sbjct: 121 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 172 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 231 S-SILEKGERL 240
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 49/254 (19%)
Query: 184 ISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMI 238
I G N + + TE F +L +G FG VYKG + +G + A+K L++
Sbjct: 5 IRSGEAPNQALLRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 63
Query: 239 SLAVHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE------ 277
S ++ +L RL+G C T T +L+ M G + +RE
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIG 122
Query: 278 -KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336
+ L+W + A+G+ YL D +++HRD+ A NVL+ + DFGLAKL
Sbjct: 123 SQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
Query: 337 L--DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRA 387
L + + H + + +A E + + ++DV+ +G+ + EL+T G+ A
Sbjct: 174 LGAEEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 232
Query: 388 LEFGKSINQKGAML 401
E SI +KG L
Sbjct: 233 SEIS-SILEKGERL 245
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 26/203 (12%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGDGT----VLAVKRLK-------DMISLAVHRNLLRLIG 251
F +LG G FG V+ K G+ + A+K LK D + + R++L +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 252 Y---------CATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
+ T + L+ ++ G + +RL ++ K A L +LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL-LDHSDSHVTTAVRGTVGHIAPEYLS 361
II+RD+K N+LLD+ + DFGL+K +DH + GTV ++APE ++
Sbjct: 145 LG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMAPEVVN 199
Query: 362 TGQSSEKTDVFGFGILLLELITG 384
++ D + FG+L+ E++TG
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVHRN-------LLR---LIGYCAT---- 255
+G G +G V++G L G +AVK + R LLR ++G+ A+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 256 ---PTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH-----EQCDPK 307
T+ L+ Y +GS+ L ++ L+ + R+A+ AA GL +LH Q P
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFL-QRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPA 133
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVG---HIAPEYLSTG- 363
I HRD K+ NVL+ + + D GLA + ++ VG ++APE L
Sbjct: 134 IAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQI 193
Query: 364 -----QSSEKTDVFGFGILLLEL 381
+S + TD++ FG++L E+
Sbjct: 194 RTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 26/203 (12%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGDGT----VLAVKRLK-------DMISLAVHRNLLRLIG 251
F +LG G FG V+ K G+ + A+K LK D + + R++L +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 252 Y---------CATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
+ T + L+ ++ G + +RL ++ K A L +LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL-LDHSDSHVTTAVRGTVGHIAPEYLS 361
II+RD+K N+LLD+ + DFGL+K +DH + GTV ++APE ++
Sbjct: 145 LG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMAPEVVN 199
Query: 362 TGQSSEKTDVFGFGILLLELITG 384
++ D + FG+L+ E++TG
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G + A+K L++ S
Sbjct: 3 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 61
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L+ M G + +RE +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 120
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFG AKLL
Sbjct: 121 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 172 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 230
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 231 S-SILEKGERL 240
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 49/254 (19%)
Query: 184 ISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVL----AVKRLKDMI 238
I G N + + TE F +LG+G FG VYKG + +G + A+K L++
Sbjct: 5 IRSGEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 63
Query: 239 SLAVHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE------ 277
S ++ +L RL+G C T T +L+ M G + +RE
Sbjct: 64 SPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIG 122
Query: 278 -KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336
+ L+W + A+G+ YL D +++HRD+ A NVL+ + DFG AKL
Sbjct: 123 SQYLLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 173
Query: 337 L--DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRA 387
L + + H + + +A E + + ++DV+ +G+ + EL+T G+ A
Sbjct: 174 LGAEEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 232
Query: 388 LEFGKSINQKGAML 401
E SI +KG L
Sbjct: 233 SEIS-SILEKGERL 245
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 26/203 (12%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGDGT----VLAVKRLK-------DMISLAVHRNLLRLIG 251
F +LG G FG V+ K G+ + A+K LK D + + R++L +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 252 Y---------CATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
+ T + L+ ++ G + +RL ++ K A L +LH
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL-LDHSDSHVTTAVRGTVGHIAPEYLS 361
II+RD+K N+LLD+ + DFGL+K +DH + GTV ++APE ++
Sbjct: 146 LG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMAPEVVN 200
Query: 362 TGQSSEKTDVFGFGILLLELITG 384
++ D + FG+L+ E++TG
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 49/251 (19%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVYKG-KLGDG----TVLAVKRLKDMISLA 241
G N + + TE F +LG+G FG VYKG + +G +A+K L++ S
Sbjct: 1 GEAPNQALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 59
Query: 242 VHRNLL---------------RLIGYCATPTERLLVYPYMSNGSVASRLRE-------KP 279
++ +L RL+G C T T +L+ M G + +RE +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 118
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL-- 337
L+W + A+G+ YL D +++HRD+ A NVL+ + DFG AKLL
Sbjct: 119 LLNW------CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 169
Query: 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEF 390
+ + H + + +A E + + ++DV+ +G+ + EL+T G+ A E
Sbjct: 170 EEKEYHAEGG-KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI 228
Query: 391 GKSINQKGAML 401
SI +KG L
Sbjct: 229 S-SILEKGERL 238
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 25/197 (12%)
Query: 209 ILGAGGFGNVYKGK-LGDGTVLAVKRLKDMIS---------LAVHRNLLR--LIGYCATP 256
+LG G +G VY G+ L + +A+K + + S +A+H++L ++ Y +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 257 TERLLVYPYMSN---GSVASRLREKPALDWNTRKRIAIGAAR---GLLYLHEQCDPKIIH 310
+E + +M GS+++ LR K + + I + GL YLH D +I+H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 131
Query: 311 RDVKAANVLLDDFCEAI-VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQS--SE 367
RD+K NVL++ + + + DFG +K L + T GT+ ++APE + G +
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 368 KTDVFGFGILLLELITG 384
D++ G ++E+ TG
Sbjct: 191 AADIWSLGCTIIEMATG 207
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 116/299 (38%), Gaps = 64/299 (21%)
Query: 207 KNILGAGGFGNVYKGKL------GDGTVLAVKRLKD--------------MISLAVHRNL 246
K LG G FG V+ + D ++AVK LKD +++ H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 247 LRLIGYCATPTERLLVYPYMSNGSVASRLR----------------EKPALDWNTRKRIA 290
++ G C ++V+ YM +G + LR K L + IA
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-----SHVT 345
A G++YL Q +HRD+ N L+ +GDFG+++ + +D H
Sbjct: 140 SQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXX 405
+R + PE + + + ++DV+ FG++L E+ T +GK W
Sbjct: 197 LPIRW----MPPESIMYRKFTTESDVWSFGVILWEIFT------YGKQ--------PWFQ 238
Query: 406 XXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDGLA 464
R L R+ E+ V L C Q P R + E+ ++L G A
Sbjct: 239 LSNTEVIECITQGRVL--ERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 210 LGAGGFGNVYKGKLGD--GTVLAVKRLKD------------MISLAVHRNLLRLIGYCAT 255
+G G FG+V LGD G +AVK +K+ +++ H NL++L+G
Sbjct: 29 IGKGEFGDVM---LGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 256 PTERL-LVYPYMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRD 312
L +V YM+ GS+ LR + L + + ++ + YL +HRD
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 142
Query: 313 VKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 372
+ A NVL+ + A V DFGL K + V+ T APE L + S K+DV+
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVW 198
Query: 373 GFGILLLELIT 383
FGILL E+ +
Sbjct: 199 SFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 210 LGAGGFGNVYKGKLGD--GTVLAVKRLKD------------MISLAVHRNLLRLIGYCAT 255
+G G FG+V LGD G +AVK +K+ +++ H NL++L+G
Sbjct: 14 IGKGEFGDVM---LGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 256 PTERL-LVYPYMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRD 312
L +V YM+ GS+ LR + L + + ++ + YL +HRD
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 127
Query: 313 VKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 372
+ A NVL+ + A V DFGL K + V+ T APE L + S K+DV+
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVW 183
Query: 373 GFGILLLELIT 383
FGILL E+ +
Sbjct: 184 SFGILLWEIYS 194
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 210 LGAGGFGNVYKGKLGD--GTVLAVKRLKD------------MISLAVHRNLLRLIGYCAT 255
+G G FG+V LGD G +AVK +K+ +++ H NL++L+G
Sbjct: 201 IGKGEFGDVM---LGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 256 PTERL-LVYPYMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRD 312
L +V YM+ GS+ LR + L + + ++ + YL +HRD
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 314
Query: 313 VKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 372
+ A NVL+ + A V DFGL K + V+ T APE L + S K+DV+
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVW 370
Query: 373 GFGILLLELIT 383
FGILL E+ +
Sbjct: 371 SFGILLWEIYS 381
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 34/215 (15%)
Query: 199 QATENFSSKNILGAGGFGNVYK-----------GKLGDGTVLAVKRLKDMIS--LAVHRN 245
+ + + LG GGF Y+ GK+ ++L K+ +S +A+H++
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 246 L--LRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR-IAIGAAR------- 295
L ++G+ + VY V R + L+ + R++ + AR
Sbjct: 99 LDNPHVVGFHGFFEDDDFVY------VVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 296 -GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
G+ YLH ++IHRD+K N+ L+D + +GDFGLA ++ D + GT +
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKTLCGTPNY 208
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
IAPE L S + D++ G +L L+ G E
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 209 ILGAGGFGN-----------VYKGKLGDGTVLAV--KRLKDMISLAVHRNLLR--LIGYC 253
LG GGF V+ GK+ ++L +R K + +++HR+L ++G+
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 254 ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR-IAIGAAR--------GLLYLHEQC 304
+ V+ V R + L+ + R++ + AR G YLH
Sbjct: 108 GFFEDNDFVF------VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN- 160
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
++IHRD+K N+ L++ E +GDFGLA +++ D + GT +IAPE LS
Sbjct: 161 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKKG 217
Query: 365 SSEKTDVFGFGILLLELITGMRALE 389
S + DV+ G ++ L+ G E
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 25/202 (12%)
Query: 203 NFSSKNILGAGGFGNVY-KGKLGDGTVLAVKRLK--------DMISLAVHRNLLRLIGY- 252
+F+ +LG G FG V + G + A+K LK D+ V + +L L+
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 253 --------CATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
C +RL V Y++ G + +++ A + GL +LH++
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKR 139
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTT-AVRGTVGHIAPEYLST 362
II+RD+K NV+LD + DFG+ K +H VTT GT +IAPE ++
Sbjct: 140 ---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIAPEIIAY 194
Query: 363 GQSSEKTDVFGFGILLLELITG 384
+ D + +G+LL E++ G
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAG 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 209 ILGAGGFGN-----------VYKGKLGDGTVLAV--KRLKDMISLAVHRNLLR--LIGYC 253
LG GGF V+ GK+ ++L +R K + +++HR+L ++G+
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 254 ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR-IAIGAAR--------GLLYLHEQC 304
+ V+ V R + L+ + R++ + AR G YLH
Sbjct: 106 GFFEDNDFVF------VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN- 158
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
++IHRD+K N+ L++ E +GDFGLA +++ D + GT +IAPE LS
Sbjct: 159 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKKG 215
Query: 365 SSEKTDVFGFGILLLELITGMRALE 389
S + DV+ G ++ L+ G E
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 28/219 (12%)
Query: 191 NFTFRELQQATENFSSKNILGAGGFGNVY---------KGKLGDGTVLA----VKRLKDM 237
N T + ENF +LG G +G V+ GKL VL V++ K
Sbjct: 43 NLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTT 102
Query: 238 ISLAVHRNLLRLIGYC----------ATPTERLLVYPYMSNGSVASRLREKPALDWNTRK 287
R +L I T T+ L+ Y++ G + + L ++ T
Sbjct: 103 EHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF---TEH 159
Query: 288 RIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA 347
+ I +L L II+RD+K N+LLD ++ DFGL+K ++
Sbjct: 160 EVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 219
Query: 348 VRGTVGHIAPEYLSTGQS--SEKTDVFGFGILLLELITG 384
GT+ ++AP+ + G S + D + G+L+ EL+TG
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 209 ILGAGGFGN-----------VYKGKLGDGTVLAV--KRLKDMISLAVHRNLLR--LIGYC 253
LG GGF V+ GK+ ++L +R K + +++HR+L ++G+
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 254 ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR-IAIGAAR--------GLLYLHEQC 304
+ V+ V R + L+ + R++ + AR G YLH
Sbjct: 88 GFFEDNDFVF------VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN- 140
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
++IHRD+K N+ L++ E +GDFGLA +++ D + GT +IAPE LS
Sbjct: 141 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKKG 197
Query: 365 SSEKTDVFGFGILLLELITGMRALE 389
S + DV+ G ++ L+ G E
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 23/206 (11%)
Query: 203 NFSSKNILGAGGFGNVY-KGKLGDGTVLAVKRLK--------DMISLAVHRNLLRLIGY- 252
+F+ +LG G FG V + G + AVK LK D+ V + +L L G
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 253 --------CATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
C +RL V Y++ G + +++ A A GL +L +
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
II+RD+K NV+LD + DFG+ K + D T GT +IAPE ++
Sbjct: 462 ---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 364 QSSEKTDVFGFGILLLELITGMRALE 389
+ D + FG+LL E++ G E
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 209 ILGAGGFGN-----------VYKGKLGDGTVLAV--KRLKDMISLAVHRNLLR--LIGYC 253
LG GGF V+ GK+ ++L +R K + +++HR+L ++G+
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 254 ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR-IAIGAAR--------GLLYLHEQC 304
+ V+ V R + L+ + R++ + AR G YLH
Sbjct: 84 GFFEDNDFVF------VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN- 136
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
++IHRD+K N+ L++ E +GDFGLA +++ D + GT +IAPE LS
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKKG 193
Query: 365 SSEKTDVFGFGILLLELITGMRALE 389
S + DV+ G ++ L+ G E
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 53/303 (17%)
Query: 192 FTFRELQQATENFSSKNILGAGGFGNVYKGKLGD------GTVLAVKRLKDMISLAVH-- 243
F E + + E + LG G FG VY+G D T +AVK + + SL
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 244 -------------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE----------KPA 280
+++RL+G + L+V M++G + S LR +P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 281 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340
++A A G+ YL+ + K +HRD+ A N ++ +GDFG+ + + +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 341 DSHVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKG 398
D + +G V +APE L G + +D++ FG++L E IT + + N++
Sbjct: 184 D-YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ- 240
Query: 399 AMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
+L++ +R + + +C Q+ P RP E+V +L
Sbjct: 241 -VLKFVMDGGYLDQPDNCPER-------------VTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 459 EGD 461
+ D
Sbjct: 287 KDD 289
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 29/221 (13%)
Query: 188 NLRNFTFRELQ---------QATENFSSKNILGAGGFGNVYKGKLGD-GTVLAVKRLKDM 237
LRN R+L+ Q E F LG G +G+VYK + G ++A+K++
Sbjct: 6 QLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE 65
Query: 238 ISLAVHRNLLRLIGYCATP------------TERLLVYPYMSNGSVAS--RLREKPALDW 283
L + ++ C +P T+ +V Y GSV+ RLR K L
Sbjct: 66 SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK-TLTE 124
Query: 284 NTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343
+ I +GL YLH + IHRD+KA N+LL+ A + DFG+A L +
Sbjct: 125 DEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK 181
Query: 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE + + D++ GI +E+ G
Sbjct: 182 RNXVI-GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG 221
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 125/303 (41%), Gaps = 53/303 (17%)
Query: 192 FTFRELQQATENFSSKNILGAGGFGNVYKGKLGD------GTVLAVKRLKDMISLAVH-- 243
F E + + E + LG G FG VY+G D T +AVK + + SL
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 244 -------------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE----------KPA 280
+++RL+G + L+V M++G + S LR +P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 281 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340
++A A G+ YL+ + K +HRD+ A N ++ +GDFG+ + + +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 341 DSHVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKG 398
D +G V +APE L G + +D++ FG++L E IT + + N++
Sbjct: 184 DXXRKGG-KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ- 240
Query: 399 AMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
+L++ +R + + +C Q+ P RP E+V +L
Sbjct: 241 -VLKFVMDGGYLDQPDNCPER-------------VTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 459 EGD 461
+ D
Sbjct: 287 KDD 289
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 32/210 (15%)
Query: 200 ATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRLK---------------DMISLAVH 243
++ F LG G + VYKG G +A+K +K ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNG--------SVASRLREKPALDWNTRKRIAIGAAR 295
N++RL T + LV+ +M N +V + R L+ N K +
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPR---GLELNLVKYFQWQLLQ 119
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
GL + HE KI+HRD+K N+L++ + +GDFGLA+ + ++ V T+ +
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYR 175
Query: 356 APEYLSTGQS-SEKTDVFGFGILLLELITG 384
AP+ L ++ S D++ G +L E+ITG
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 209 ILGAGGFGN-----------VYKGKLGDGTVLAV--KRLKDMISLAVHRNLLR--LIGYC 253
LG GGF V+ GK+ ++L +R K + +++HR+L ++G+
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 254 ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR-IAIGAAR--------GLLYLHEQC 304
+ V+ V R + L+ + R++ + AR G YLH
Sbjct: 84 GFFEDNDFVF------VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN- 136
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
++IHRD+K N+ L++ E +GDFGLA +++ D + GT +IAPE LS
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKKG 193
Query: 365 SSEKTDVFGFGILLLELITGMRALE 389
S + DV+ G ++ L+ G E
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 210 LGAGGFGNVYKGKLGD--GTVLAVKRLKD------------MISLAVHRNLLRLIGYCAT 255
+G G FG+V LGD G +AVK +K+ +++ H NL++L+G
Sbjct: 20 IGKGEFGDVM---LGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 256 PTERL-LVYPYMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRD 312
L +V YM+ GS+ LR + L + + ++ + YL +HRD
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 133
Query: 313 VKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 372
+ A NVL+ + A V DFGL K + V+ T APE L S K+DV+
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFSTKSDVW 189
Query: 373 GFGILLLELIT 383
FGILL E+ +
Sbjct: 190 SFGILLWEIYS 200
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 34/215 (15%)
Query: 199 QATENFSSKNILGAGGFGNVYK-----------GKLGDGTVLAVKRLKDMIS--LAVHRN 245
+ + + LG GGF Y+ GK+ ++L K+ +S +A+H++
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 246 L--LRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR-IAIGAAR------- 295
L ++G+ + VY V R + L+ + R++ + AR
Sbjct: 99 LDNPHVVGFHGFFEDDDFVY------VVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 296 -GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
G+ YLH ++IHRD+K N+ L+D + +GDFGLA ++ D + GT +
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKXLCGTPNY 208
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
IAPE L S + D++ G +L L+ G E
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 202 ENFSSKNILGAGGFGNVYK---------GKLGDGTVLA----VKRLKDMISLAVHRNLLR 248
E F +LG GG+G V++ GK+ VL V+ KD RN+L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 249 ---------LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
LI T + L+ Y+S G + +L + +T + L +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
LH++ II+RD+K N++L+ + DFGL K H D VT GT+ ++APE
Sbjct: 137 LHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHTFCGTIEYMAPEI 192
Query: 360 LSTGQSSEKTDVFGFGILLLELITG 384
L + D + G L+ +++TG
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 125/303 (41%), Gaps = 53/303 (17%)
Query: 192 FTFRELQQATENFSSKNILGAGGFGNVYKGKLGD------GTVLAVKRLKDMISLAVH-- 243
F E + + E + LG G FG VY+G D T +AVK + + SL
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 244 -------------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE----------KPA 280
+++RL+G + L+V M++G + S LR +P
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 281 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340
++A A G+ YL+ + K +HRD+ A N ++ +GDFG+ + + +
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 180
Query: 341 DSHVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKG 398
D +G V +APE L G + +D++ FG++L E IT + + N++
Sbjct: 181 DXXRKGG-KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ- 237
Query: 399 AMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
+L++ +R + + +C Q+ P RP E+V +L
Sbjct: 238 -VLKFVMDGGYLDQPDNCPER-------------VTDLMRMCWQFNPKMRPTFLEIVNLL 283
Query: 459 EGD 461
+ D
Sbjct: 284 KDD 286
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 86/198 (43%), Gaps = 28/198 (14%)
Query: 210 LGAGGFGNVY-----KGKLGDGTVLAVKRLK---------------DMISLAVHRNLLRL 249
LG G FG V G G ++AVK LK D++ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 250 IGYCATPTER--LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C E+ LV Y+ GS+ L + ++ A G+ YLH Q
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHSQ---H 137
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTGQS 365
IHR++ A NVLLD+ +GDFGLAK + + G V APE L +
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKF 197
Query: 366 SEKTDVFGFGILLLELIT 383
+DV+ FG+ L EL+T
Sbjct: 198 YYASDVWSFGVTLYELLT 215
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 127/300 (42%), Gaps = 76/300 (25%)
Query: 207 KNILGAGGFGNVYKGKLG-DGTVL--AVKRLKDMISLAVHR----------------NLL 247
++++G G FG V K ++ DG + A+KR+K+ S HR N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA----------------I 291
L+G C L Y +G++ LR+ L+ + IA
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 292 GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV-RG 350
ARG+ YL ++ + IHRD+ A N+L+ + A + DFGL++ + +V + R
Sbjct: 140 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 193
Query: 351 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEFGKSINQKGAMLEW 403
V +A E L+ + +DV+ +G+LL E+++ GM E + + Q G LE
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLE- 251
Query: 404 XXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVV----RMLE 459
+ L + E+ + C + P RP ++++ RMLE
Sbjct: 252 ---------------KPLNCD------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 290
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 202 ENFSSKNILGAGGFGNVYK---------GKLGDGTVLA----VKRLKDMISLAVHRNLLR 248
E F +LG GG+G V++ GK+ VL V+ KD RN+L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 249 ---------LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299
LI T + L+ Y+S G + +L + +T + L +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
LH++ II+RD+K N++L+ + DFGL K H D VT GT+ ++APE
Sbjct: 137 LHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHXFCGTIEYMAPEI 192
Query: 360 LSTGQSSEKTDVFGFGILLLELITG 384
L + D + G L+ +++TG
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 23/206 (11%)
Query: 203 NFSSKNILGAGGFGNVY-KGKLGDGTVLAVKRLK--------DMISLAVHRNLLRLIGY- 252
+F+ +LG G FG V + G + AVK LK D+ V + +L L G
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 253 --------CATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
C +RL V Y++ G + +++ A A GL +L +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
II+RD+K NV+LD + DFG+ K + D T GT +IAPE ++
Sbjct: 141 ---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEIIAYQ 196
Query: 364 QSSEKTDVFGFGILLLELITGMRALE 389
+ D + FG+LL E++ G E
Sbjct: 197 PYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 127/300 (42%), Gaps = 76/300 (25%)
Query: 207 KNILGAGGFGNVYKGKLG-DGTVL--AVKRLKDMISLAVHR----------------NLL 247
++++G G FG V K ++ DG + A+KR+K+ S HR N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA----------------I 291
L+G C L Y +G++ LR+ L+ + IA
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 292 GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV-RG 350
ARG+ YL ++ + IHRD+ A N+L+ + A + DFGL++ + +V + R
Sbjct: 150 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 203
Query: 351 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEFGKSINQKGAMLEW 403
V +A E L+ + +DV+ +G+LL E+++ GM E + + Q G LE
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLE- 261
Query: 404 XXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVV----RMLE 459
+ L + E+ + C + P RP ++++ RMLE
Sbjct: 262 ---------------KPLNCD------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 34/215 (15%)
Query: 199 QATENFSSKNILGAGGFGNVYK-----------GKLGDGTVLAVKRLKDMIS--LAVHRN 245
+ + + LG GGF Y+ GK+ ++L K+ +S +A+H++
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 246 L--LRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR-IAIGAAR------- 295
L ++G+ + VY V R + L+ + R++ + AR
Sbjct: 99 LDNPHVVGFHGFFEDDDFVY------VVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 296 -GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
G+ YLH ++IHRD+K N+ L+D + +GDFGLA ++ D + GT +
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNY 208
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
IAPE L S + D++ G +L L+ G E
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 87/205 (42%), Gaps = 42/205 (20%)
Query: 210 LGAGGFGNVY-----KGKLGDGTVLAVKRLK---------------DMISLAVHRNLLRL 249
LG G FG V G G ++AVK LK D++ H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 250 IGYC--ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD-- 305
G C A LV Y+ GS+ L R +IG A+ LL+ + C+
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL-----------PRHSIGLAQLLLFAQQICEGM 147
Query: 306 -----PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD--HSDSHVTTAVRGTVGHIAPE 358
IHRD+ A NVLLD+ +GDFGLAK + H V V APE
Sbjct: 148 AYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE 207
Query: 359 YLSTGQSSEKTDVFGFGILLLELIT 383
L + +DV+ FG+ L EL+T
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 34/215 (15%)
Query: 199 QATENFSSKNILGAGGFGNVYK-----------GKLGDGTVLAVKRLKDMIS--LAVHRN 245
+ + + LG GGF Y+ GK+ ++L K+ +S +A+H++
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 246 L--LRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR-IAIGAAR------- 295
L ++G+ + VY V R + L+ + R++ + AR
Sbjct: 83 LDNPHVVGFHGFFEDDDFVY------VVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 136
Query: 296 -GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
G+ YLH ++IHRD+K N+ L+D + +GDFGLA ++ D + GT +
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNY 192
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
IAPE L S + D++ G +L L+ G E
Sbjct: 193 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 27/200 (13%)
Query: 207 KNILGAGGFGNVYKGKLG----DGTVLAVKRLK---------DMISLAV------HRNLL 247
+ ++GAG FG V G+L +A+K LK D + A H N++
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCD 305
L G ++V +M NG++ + LR+ + + + + G A G+ YL D
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG-QFTVIQLVGMLRGIAAGMRYL---AD 163
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTG 363
+HRD+ A N+L++ V DFGL+++++ V T G V APE +
Sbjct: 164 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 364 QSSEKTDVFGFGILLLELIT 383
+ + +DV+ +GI++ E+++
Sbjct: 224 KFTSASDVWSYGIVMWEVMS 243
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 88/205 (42%), Gaps = 42/205 (20%)
Query: 210 LGAGGFGNVY-----KGKLGDGTVLAVKRLK---------------DMISLAVHRNLLRL 249
LG G FG V G G ++AVK LK D++ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 250 IGYCATPTER--LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD-- 305
G C E+ LV Y+ GS+ L R +IG A+ LL+ + C+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----------PRHSIGLAQLLLFAQQICEGM 130
Query: 306 -----PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPE 358
IHR++ A NVLLD+ +GDFGLAK + + G V APE
Sbjct: 131 AYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 359 YLSTGQSSEKTDVFGFGILLLELIT 383
L + +DV+ FG+ L EL+T
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 95/227 (41%), Gaps = 24/227 (10%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPA--------LDWNTRKRIAIGAA 294
H N++ E LV +S GSV ++ A LD +T I
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL----DHSDSHVTTAVRG 350
GL YLH+ IHRDVKA N+LL + + DFG++ L D + + V G
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 351 TVGHIAPEYLSTGQSSE-KTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXX 409
T +APE + + + K D++ FGI +EL TG A + K K ML
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLML--TLQNDP 244
Query: 410 XXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456
D+E+ Y + ++ LC Q P RP +E++R
Sbjct: 245 PSLETGVQDKEMLKKYGK----SFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
Query: 209 ILGAGGFGN-----------VYKGKLGDGTVLAV--KRLKDMISLAVHRNLLR--LIGYC 253
LG GGF V+ GK+ ++L +R K + +++HR+L ++G+
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 254 ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR-IAIGAAR--------GLLYLHEQC 304
+ V+ V R + L+ + R++ + AR G YLH
Sbjct: 82 GFFEDNDFVF------VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN- 134
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
++IHRD+K N+ L++ E +GDFGLA +++ D + GT +IAPE LS
Sbjct: 135 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKKG 191
Query: 365 SSEKTDVFGFGILLLELITGMRALE 389
S + DV+ G ++ L+ G E
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 53/299 (17%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGD------GTVLAVKRLKDMISLAVH------ 243
E + + E + LG G FG VY+G D T +AVK + + SL
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 244 ---------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE----------KPALDWN 284
+++RL+G + L+V M++G + S LR +P
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 285 TRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344
++A A G+ YL+ + K +HRD+ A N ++ +GDFG+ + + +D
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 345 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+G V +APE L G + +D++ FG++L E IT + + N++ +L+
Sbjct: 188 KGG-KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ--VLK 243
Query: 403 WXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461
+ +R + + +C Q+ P RP E+V +L+ D
Sbjct: 244 FVMDGGYLDQPDNCPER-------------VTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 38/212 (17%)
Query: 204 FSSKNILGAGGFGNVYKGK-LGDGTVLAVK----------RLKDMISL----AVHRNLLR 248
F ++G G +G VYKG+ + G + A+K +K I++ + HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 249 LIGYCATPT------ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAA-----RGL 297
G + LV + GSV ++ NT K I RGL
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGL 142
Query: 298 LYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAP 357
+LH+ K+IHRD+K NVLL + E + DFG++ LD + T + GT +AP
Sbjct: 143 SHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAP 198
Query: 358 EYLSTGQSSE-----KTDVFGFGILLLELITG 384
E ++ ++ + K+D++ GI +E+ G
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 63/245 (25%)
Query: 203 NFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-----------DMISLAV--HRNLLR 248
+F +LG G FG V K + D A+K+++ +++ LA H+ ++R
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 249 LIGYCATPTERLLVYP---------------YMSNGSV-----ASRLREKPALDWNTRKR 288
Y A R V P Y N ++ + L ++ W ++
Sbjct: 67 Y--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS------DS 342
I L Y+H Q IIHRD+K N+ +D+ +GDFGLAK + S DS
Sbjct: 125 IL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 343 H--------VTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGILLLELI----TGMRALE 389
+T+A+ GT ++A E L TG +EK D++ GI+ E+I TGM +
Sbjct: 178 QNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVN 236
Query: 390 FGKSI 394
K +
Sbjct: 237 ILKKL 241
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 126/303 (41%), Gaps = 53/303 (17%)
Query: 192 FTFRELQQATENFSSKNILGAGGFGNVYKGKLGD------GTVLAVKRLKDMISLAVH-- 243
F E + + E + LG G FG VY+G D T +AVK + + SL
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 244 -------------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE----------KPA 280
+++RL+G + L+V M++G + S LR +P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 281 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340
++A A G+ YL+ + K +HRD+ A N ++ +GDFG+ + + +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YE 182
Query: 341 DSHVTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKG 398
++ +G V +APE L G + +D++ FG++L E IT + + N++
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ- 240
Query: 399 AMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
+L++ +R + + +C Q+ P RP E+V +L
Sbjct: 241 -VLKFVMDGGYLDQPDNCPER-------------VTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 459 EGD 461
+ D
Sbjct: 287 KDD 289
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 95/227 (41%), Gaps = 24/227 (10%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPA--------LDWNTRKRIAIGAA 294
H N++ E LV +S GSV ++ A LD +T I
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL----DHSDSHVTTAVRG 350
GL YLH+ IHRDVKA N+LL + + DFG++ L D + + V G
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 351 TVGHIAPEYLSTGQSSE-KTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXX 409
T +APE + + + K D++ FGI +EL TG A + K K ML
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLML--TLQNDP 239
Query: 410 XXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456
D+E+ Y + ++ LC Q P RP +E++R
Sbjct: 240 PSLETGVQDKEMLKKYGK----SFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 27/200 (13%)
Query: 207 KNILGAGGFGNVYKGKLG----DGTVLAVKRLK---------DMISLAV------HRNLL 247
+ ++G G FG V G+L +A+K LK D +S A H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCD 305
L G +++ YM NGS+ + LR+ + + + + G G+ YL D
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQLVGMLRGIGSGMKYLS---D 134
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTG 363
+HRD+ A N+L++ V DFG++++L D ++ T + + APE ++
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 364 QSSEKTDVFGFGILLLELIT 383
+ + +DV+ +GI++ E+++
Sbjct: 195 KFTSASDVWSYGIVMWEVMS 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 90/203 (44%), Gaps = 30/203 (14%)
Query: 204 FSSKNILGAGGFGNVY------KGKLGDGTVLAVKRLKDMIS-----LAV-----HRNLL 247
F K LG G F V GKL + K LK S +AV H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREK---PALDWNTRKRIAIGAARGLLYLHEQC 304
L +P LV +S G + R+ EK D +T R + A + YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA---VYYLHRMG 140
Query: 305 DPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
I+HRD+K N+L D+ + ++ DFGL+K+ D V + GT G++APE L+
Sbjct: 141 ---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTPGYVAPEVLA 195
Query: 362 TGQSSEKTDVFGFGILLLELITG 384
S+ D + G++ L+ G
Sbjct: 196 QKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 130/312 (41%), Gaps = 62/312 (19%)
Query: 210 LGAGGFGNVYKGKLGD------GTVLAVKRLKDMISLAVH---------------RNLLR 248
LG G FG VY+G D T +AVK + + SL +++R
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLRE----------KPALDWNTRKRIAIGAARGLL 298
L+G + L+V M++G + S LR +P ++A A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRG--TVGHIA 356
YL+ + K +HRD+ A N ++ +GDFG+ + + +D + +G V +A
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMA 199
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXX 416
PE L G + +D++ FG++L E IT + + N++ +L++
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ--VLKFVMDGGYLDQPDNC 256
Query: 417 XDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDGLAEKWAAAHNHTNP 476
+R + + +C Q+ P RP E+V +L+ D + + P
Sbjct: 257 PER-------------VTDLMRMCWQFNPKMRPTFLEIVNLLKDD---------LHPSFP 294
Query: 477 TMNNFHTNTKKS 488
++ FH+ K+
Sbjct: 295 EVSFFHSEENKA 306
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 37/221 (16%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKG------KLGDGTVLAVKRLKDMISLAVH------ 243
E + A E + LG G FG VY+G K T +A+K + + S+
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 244 ---------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWNT-------R 286
+++RL+G + L++ M+ G + S LR +PA+ N
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 287 KRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344
K I + A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + +D +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YY 194
Query: 345 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+G V ++PE L G + +DV+ FG++L E+ T
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 27/200 (13%)
Query: 207 KNILGAGGFGNVYKGKLG----DGTVLAVKRLK---------DMISLAV------HRNLL 247
+ ++G G FG V G+L +A+K LK D +S A H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI--GAARGLLYLHEQCD 305
L G +++ YM NGS+ + LR+ + + + + G G+ YL D
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQLVGMLRGIGSGMKYLS---D 128
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTG 363
+HRD+ A N+L++ V DFG++++L D ++ T + + APE ++
Sbjct: 129 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 364 QSSEKTDVFGFGILLLELIT 383
+ + +DV+ +GI++ E+++
Sbjct: 189 KFTSASDVWSYGIVMWEVMS 208
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 192 FTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-------LAVKRLKDMISLAVH- 243
F E + A E + LG G FG VY+G + G V +A+K + + S+
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 244 --------------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWN---- 284
+++RL+G + L++ M+ G + S LR +P ++ N
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 285 ---TRKRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339
K I + A G+ YL+ K +HRD+ A N ++ + +GDFG+ + +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 340 SDSHVTTAVRGT--VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+D + +G V ++PE L G + +DV+ FG++L E+ T
Sbjct: 182 TD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-------LAVKRLKDMISLAVH----- 243
E + A E + LG G FG VY+G + G V +A+K + + S+
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 244 ----------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWN-------T 285
+++RL+G + L++ M+ G + S LR +PA+ N
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 286 RKRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343
K I + A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + +D +
Sbjct: 128 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-Y 183
Query: 344 VTTAVRGT--VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+G V ++PE L G + +DV+ FG++L E+ T
Sbjct: 184 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 47/222 (21%)
Query: 203 NFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------DMISLAV--HRNLLRLIG 251
+F ++G+GGFG V+K K DG ++R+K ++ +LA H N++ G
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNG 72
Query: 252 ------YCATPTERLL----VYPYMSNGSVASRLR---------EKPALD-WNTRKR--- 288
Y ++ L P S S S+ + +K L+ W ++R
Sbjct: 73 CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 132
Query: 289 --------IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340
+ +G+ Y+H + K+IHRD+K +N+ L D + +GDFGL L +
Sbjct: 133 LDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 382
T +GT+ +++PE +S+ ++ D++ G++L EL+
Sbjct: 190 GKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 199 QATENFSSKNILGAGGFGNVYKG-----------KLGDGTVL----AVKRLKDMISLAV- 242
+ E+F N+LG G F VY+ K+ D + V+R+++ + +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 243 --HRNLLRLIGYCATPTERLLVYPYMSNGSVASRL--REKPALDWNTRKRIAIGAARGLL 298
H ++L L Y LV NG + L R KP N + G+L
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP-FSENEARHFMHQIITGML 126
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAP 357
YLH I+HRD+ +N+LL + DFGLA L + H T GT +I+P
Sbjct: 127 YLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GTPNYISP 181
Query: 358 EYLSTGQSSEKTDVFGFGILLLELITG 384
E + ++DV+ G + L+ G
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIG 208
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 37/221 (16%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKG------KLGDGTVLAVKRLKDMISLAVH------ 243
E + A E + LG G FG VY+G K T +A+K + + S+
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 244 ---------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWNT-------R 286
+++RL+G + L++ M+ G + S LR +P ++ N
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 287 KRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344
K I + A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + +D +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YY 194
Query: 345 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+G V ++PE L G + +DV+ FG++L E+ T
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-------LAVKRLKDMISLAVH----- 243
E + A E + LG G FG VY+G + G V +A+K + + S+
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 244 ----------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWN-------T 285
+++RL+G + L++ M+ G + S LR +P ++ N
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 286 RKRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343
K I + A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + +D +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-Y 180
Query: 344 VTTAVRGT--VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+G V ++PE L G + +DV+ FG++L E+ T
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-------LAVKRLKDMISLAVH----- 243
E + A E + LG G FG VY+G + G V +A+K + + S+
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 244 ----------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWN-------T 285
+++RL+G + L++ M+ G + S LR +P ++ N
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 286 RKRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343
K I + A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + +D +
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-Y 186
Query: 344 VTTAVRGT--VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+G V ++PE L G + +DV+ FG++L E+ T
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-------LAVKRLKDMISLAVH----- 243
E + A E + LG G FG VY+G + G V +A+K + + S+
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 244 ----------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWN-------T 285
+++RL+G + L++ M+ G + S LR +P ++ N
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 286 RKRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343
K I + A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + +D +
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-Y 187
Query: 344 VTTAVRGT--VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+G V ++PE L G + +DV+ FG++L E+ T
Sbjct: 188 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-------LAVKRLKDMISLAVH----- 243
E + A E + LG G FG VY+G + G V +A+K + + S+
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 244 ----------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWN-------T 285
+++RL+G + L++ M+ G + S LR +P ++ N
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 286 RKRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343
K I + A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + +D +
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-Y 186
Query: 344 VTTAVRGT--VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+G V ++PE L G + +DV+ FG++L E+ T
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 92/212 (43%), Gaps = 43/212 (20%)
Query: 210 LGAGGFGNV-YKGKLGDGTVLAVKRL--------------KDMISLAVHRNLLRLIGYC- 253
LG GGF V L DG A+KR+ DM L H N+LRL+ YC
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 254 ---ATPTERLLVYPYMSNGSVASRL-REKPALDWNTRKRI---AIGAARGLLYLHEQCDP 306
E L+ P+ G++ + + R K ++ T +I +G RGL +H +
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK--- 153
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT-----------TAVRGTVGHI 355
HRD+K N+LL D + ++ D G ++ + HV A R T+ +
Sbjct: 154 GYAHRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 356 APEYLSTGQS---SEKTDVFGFGILLLELITG 384
APE S E+TDV+ G +L ++ G
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-------LAVKRLKDMISLAVH----- 243
E + A E + LG G FG VY+G + G V +A+K + + S+
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 244 ----------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWNT------- 285
+++RL+G + L++ M+ G + S LR +P ++ N
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 286 RKRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343
K I + A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + +D
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 344 VTTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+G V ++PE L G + +DV+ FG++L E+ T
Sbjct: 180 RKGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 201 TENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKDMISLAV------------HRNLL 247
++ F ++ LG G VY+ K G A+K LK + + H N++
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNII 111
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLL----YLHEQ 303
+L TPTE LV ++ G + R+ EK +R A A + +L YLHE
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS----ERDAADAVKQILEAVAYLHEN 167
Query: 304 CDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
I+HRD+K N+L + DFGL+K+++H + V GT G+ APE L
Sbjct: 168 ---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH--QVLMKTVCGTPGYCAPEIL 222
Query: 361 STGQSSEKTDVFGFGILLLELITGM 385
+ D++ GI+ L+ G
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCGF 247
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-------LAVKRLKDMISLAVH----- 243
E + A E + LG G FG VY+G + G V +A+K + + S+
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 244 ----------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWN-------T 285
+++RL+G + L++ M+ G + S LR +P ++ N
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 286 RKRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343
K I + A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + +D
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 344 VTTAVRGT--VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+G V ++PE L G + +DV+ FG++L E+ T
Sbjct: 189 RKGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-------LAVKRLKDMISLAVH----- 243
E + A E + LG G FG VY+G + G V +A+K + + S+
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 244 ----------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWN-------T 285
+++RL+G + L++ M+ G + S LR +P ++ N
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 286 RKRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343
K I + A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + +D +
Sbjct: 160 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-Y 215
Query: 344 VTTAVRGT--VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+G V ++PE L G + +DV+ FG++L E+ T
Sbjct: 216 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 32/215 (14%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKD---------MISLAV---- 242
A E+ ILG G FG VY+G G+ +AVK K +S AV
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 243 --HRNLLRLIGYCAT-PTERLL-VYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLL 298
H ++++LIG PT ++ +YPY G R K +L T ++ + +
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMA 139
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
YL +HRD+ N+L+ +GDFGL++ ++ D + + R + ++PE
Sbjct: 140 YLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
Query: 359 YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS 393
++ + + +DV+ F + + E+ L FGK
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEI------LSFGKQ 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 208 NILGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMS 267
++ G G F +L + T+ V L+ ++ H N+++L T T LV+ M
Sbjct: 51 DVTGGGSFSAEEVQELREATLKEVDILR---KVSGHPNIIQLKDTYETNTFFFLVFDLMK 107
Query: 268 NGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI 327
G + L EK L ++I + LH+ I+HRD+K N+LLDD
Sbjct: 108 KGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIK 164
Query: 328 VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSS------EKTDVFGFGILLLEL 381
+ DFG + LD + +V GT ++APE + + ++ D++ G+++ L
Sbjct: 165 LTDFGFSCQLDPGEK--LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 222
Query: 382 ITG 384
+ G
Sbjct: 223 LAG 225
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
+KR + L H ++++L +TPT+ +V Y+S G + + + ++ +R+
Sbjct: 58 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 117
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRG 350
+ Y H ++HRD+K NVLLD A + DFGL+ ++ SD G
Sbjct: 118 QQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRTSCG 172
Query: 351 TVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITG 384
+ + APE +S + + D++ G++L L+ G
Sbjct: 173 SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 32/215 (14%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKD---------MISLAV---- 242
A E+ ILG G FG VY+G G+ +AVK K +S AV
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 243 --HRNLLRLIGYCAT-PTERLL-VYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLL 298
H ++++LIG PT ++ +YPY G R K +L T ++ + +
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMA 123
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
YL +HRD+ N+L+ +GDFGL++ ++ D + + R + ++PE
Sbjct: 124 YLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 180
Query: 359 YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS 393
++ + + +DV+ F + + E+ L FGK
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEI------LSFGKQ 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 32/215 (14%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKD---------MISLAV---- 242
A E+ ILG G FG VY+G G+ +AVK K +S AV
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 243 --HRNLLRLIGYCAT-PTERLL-VYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLL 298
H ++++LIG PT ++ +YPY G R K +L T ++ + +
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMA 127
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
YL +HRD+ N+L+ +GDFGL++ ++ D + + R + ++PE
Sbjct: 128 YLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
Query: 359 YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS 393
++ + + +DV+ F + + E+ L FGK
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEI------LSFGKQ 213
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 85/213 (39%), Gaps = 36/213 (16%)
Query: 200 ATENFSSKNILGAGGFGNVYKGK------------------------LGDGTVLAVKRLK 235
AT + +G G +G VYK + L TV V L+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 236 DMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR------EKPALDWNTRKRI 289
+ + H N++RL+ CAT + + V LR P L T K +
Sbjct: 67 RLEAFE-HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVR 349
RGL +LH C I+HRD+K N+L+ + DFGLA++ +S T V
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI--YSYQMALTPVV 180
Query: 350 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 382
T+ + APE L + D++ G + E+
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 34/234 (14%)
Query: 197 LQQATENFSSKNILGAGGFGNVYKGK--LGDGTVLAVKRLK-----------DMISLAV- 242
L +A + + +G G +G V+K + G +A+KR++ + +AV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 243 -------HRNLLRLIGYCAT-----PTERLLVYPYMSNGSVASRLRE--KPALDWNTRKR 288
H N++RL C T+ LV+ ++ + + + L + +P + T K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+ RGL +LH +++HRD+K N+L+ + + DFGLA++ +S T+V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTSV 179
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
T+ + APE L + D++ G + E+ ++Q G +L+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 233
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 42/213 (19%)
Query: 207 KNILGAGGFGNVYKGKLG-DGTVL--AVKRLKDMISLAVHR----------------NLL 247
++++G G FG V K ++ DG + A+KR+K+ S HR N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA----------------I 291
L+G C L Y +G++ LR+ L+ + IA
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 292 GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV-RG 350
ARG+ YL ++ + IHR++ A N+L+ + A + DFGL++ + +V + R
Sbjct: 147 DVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 200
Query: 351 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
V +A E L+ + +DV+ +G+LL E+++
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 43/232 (18%)
Query: 184 ISLG--NLRNFTFRELQQATENFSSKNI------LGAGGFGNVYKGKLGDGTVLAVKRLK 235
+ LG NL + ++ + T + + ++ LG G FG VYK + + +VLA ++
Sbjct: 11 VDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 70
Query: 236 D----------MISLAV-----HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--K 278
D M+ + + H N+++L+ ++ + + G+V + + E +
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER 130
Query: 279 PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLA---- 334
P T +I + + L L+ D KIIHRD+KA N+L + + DFG++
Sbjct: 131 PL----TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
Query: 335 KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE-----KTDVFGFGILLLEL 381
+ + DS + GT +APE + S + K DV+ GI L+E+
Sbjct: 187 RXIQRRDSFI-----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 36/210 (17%)
Query: 203 NFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------DMISLAV--HRNLLRLIG 251
+F ++G+GGFG V+K K DG +KR+K ++ +LA H N++ G
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG 71
Query: 252 YC----------------ATPTERLLV-YPYMSNGSVASRL--REKPALDWNTRKRIAIG 292
C + T+ L + + G++ + R LD +
Sbjct: 72 -CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 293 AARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+G+ Y+H + K+I+RD+K +N+ L D + +GDFGL L + + +GT+
Sbjct: 131 ITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KGTL 185
Query: 353 GHIAPEYLSTGQSSEKTDVFGFGILLLELI 382
+++PE +S+ ++ D++ G++L EL+
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 125/299 (41%), Gaps = 53/299 (17%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGD------GTVLAVKRLKDMISLAVH------ 243
E + + E + LG G FG VY+G D T +AVK + + SL
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 244 ---------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE----------KPALDWN 284
+++RL+G + L+V M++G + S LR +P
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 285 TRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344
++A A G+ YL+ + K +HR++ A N ++ +GDFG+ + + +D +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD-YY 186
Query: 345 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+G V +APE L G + +D++ FG++L E IT + + N++ +L+
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ--VLK 243
Query: 403 WXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461
+ +R + + +C Q+ P RP E+V +L+ D
Sbjct: 244 FVMDGGYLDQPDNCPER-------------VTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 261 LVYPYMSNGSVASRL--------REKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRD 312
+V Y G + R+ +E LDW + +A L ++H D KI+HRD
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVH---DRKILHRD 150
Query: 313 VKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 372
+K+ N+ L +GDFG+A++L+ S + A GT +++PE + K+D++
Sbjct: 151 IKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLSPEICENKPYNNKSDIW 209
Query: 373 GFGILLLELITGMRALEFGKSIN 395
G +L EL T A E G N
Sbjct: 210 ALGCVLYELCTLKHAFEAGSMKN 232
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 125/299 (41%), Gaps = 53/299 (17%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGD------GTVLAVKRLKDMISLAVH------ 243
E + + E + LG G FG VY+G D T +AVK + + SL
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 71
Query: 244 ---------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE----------KPALDWN 284
+++RL+G + L+V M++G + S LR +P
Sbjct: 72 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 131
Query: 285 TRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344
++A A G+ YL+ + K +HR++ A N ++ +GDFG+ + + +D +
Sbjct: 132 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD-YY 187
Query: 345 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+G V +APE L G + +D++ FG++L E IT + + N++ +L+
Sbjct: 188 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ--VLK 244
Query: 403 WXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461
+ +R + + +C Q+ P RP E+V +L+ D
Sbjct: 245 FVMDGGYLDQPDNCPER-------------VTDLMRMCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 208 NILGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMS 267
++ G G F +L + T+ V L+ ++ H N+++L T T LV+ M
Sbjct: 38 DVTGGGSFSAEEVQELREATLKEVDILR---KVSGHPNIIQLKDTYETNTFFFLVFDLMK 94
Query: 268 NGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI 327
G + L EK L ++I + LH+ I+HRD+K N+LLDD
Sbjct: 95 KGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIK 151
Query: 328 VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSS------EKTDVFGFGILLLEL 381
+ DFG + LD + V GT ++APE + + ++ D++ G+++ L
Sbjct: 152 LTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 209
Query: 382 ITG 384
+ G
Sbjct: 210 LAG 212
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 43/232 (18%)
Query: 184 ISLG--NLRNFTFRELQQATENFSSKNI------LGAGGFGNVYKGKLGDGTVLAVKRLK 235
+ LG NL + ++ + T + + ++ LG G FG VYK + + +VLA ++
Sbjct: 11 VDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 70
Query: 236 D----------MISLAV-----HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--K 278
D M+ + + H N+++L+ ++ + + G+V + + E +
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER 130
Query: 279 PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLA---- 334
P T +I + + L L+ D KIIHRD+KA N+L + + DFG++
Sbjct: 131 PL----TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
Query: 335 KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE-----KTDVFGFGILLLEL 381
+ + DS + GT +APE + S + K DV+ GI L+E+
Sbjct: 187 RTIQRRDSFI-----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 31/200 (15%)
Query: 204 FSSKNILGAGGFGNVYKGK-LGDGTVLAVKRL-----------KDMISLAV------HRN 245
FS +G G FG VY + + + V+A+K++ +D+I H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 246 LLRLIG-YCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
++ G Y T L++ + + S + +KP + + GA +GL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA-VTHGALQGLAYLHSH- 173
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY---LS 361
+IHRDVKA N+LL + +GDFG A ++ ++ V GT +APE +
Sbjct: 174 --NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMD 226
Query: 362 TGQSSEKTDVFGFGILLLEL 381
GQ K DV+ GI +EL
Sbjct: 227 EGQYDGKVDVWSLGITCIEL 246
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 36/215 (16%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG--DGTVL--AVKRLK-DMISLAVHRNLLR-------- 248
+ F+ +LG G FG+V + +L DG+ + AVK LK D+I+ + LR
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 249 -------LIGYCATPTER------LLVYPYMSNGSV-----ASRLREKPA-LDWNTRKRI 289
L+G + +++ P+M +G + ASR+ E P L T R
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT-TAV 348
+ A G+ YL + IHRD+ A N +L + V DFGL++ + D + A
Sbjct: 143 MVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+ V +A E L+ + +DV+ FG+ + E++T
Sbjct: 200 KLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 45/219 (20%)
Query: 203 NFSSKNILGAGGFGNVYKGKL------GDGTVLAVKRLKD--------------MISLAV 242
N K LG G FG V+ + D ++AVK LKD +++
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREK-------------PALDWNTRKRI 289
H ++++ G C ++V+ YM +G + LR L + I
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-----SHV 344
A A G++YL Q +HRD+ N L+ + +GDFG+++ + +D H
Sbjct: 134 AQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHT 190
Query: 345 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+R + PE + + + ++DV+ G++L E+ T
Sbjct: 191 MLPIRW----MPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
+KR + L H ++++L +TPT+ +V Y+S G + + + ++ +R+
Sbjct: 58 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF 117
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRG 350
+ Y H ++HRD+K NVLLD A + DFGL+ ++ SD G
Sbjct: 118 QQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRDSCG 172
Query: 351 TVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITG 384
+ + APE +S + + D++ G++L L+ G
Sbjct: 173 SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 208 NILGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMS 267
++ G G F +L + T+ V L+ ++ H N+++L T T LV+ M
Sbjct: 51 DVTGGGSFSAEEVQELREATLKEVDILR---KVSGHPNIIQLKDTYETNTFFFLVFDLMK 107
Query: 268 NGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI 327
G + L EK L ++I + LH+ I+HRD+K N+LLDD
Sbjct: 108 KGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIK 164
Query: 328 VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSS------EKTDVFGFGILLLEL 381
+ DFG + LD + V GT ++APE + + ++ D++ G+++ L
Sbjct: 165 LTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 222
Query: 382 ITG 384
+ G
Sbjct: 223 LAG 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 229 LAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR 288
+ V+R + L H ++++L TPT+ ++V Y + G + + EK + + +R
Sbjct: 54 MRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRR 112
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+ Y H KI+HRD+K N+LLDD + DFGL+ ++ +D +
Sbjct: 113 FFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNFLKTS 167
Query: 349 RGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITG 384
G+ + APE ++ + + DV+ GI+L ++ G
Sbjct: 168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVG 204
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 94/230 (40%), Gaps = 29/230 (12%)
Query: 180 EEGLISLGNLRNFTFRELQ---QATENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKR-- 233
+E L SL LR ++ L+ + F +LG GGFG V+ ++ G + A K+
Sbjct: 160 QEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLN 219
Query: 234 --------------LKDMISLAVHRNLLRLIGYC-ATPTERLLVYPYMSNGSVASRL--- 275
++ I VH + + Y T T+ LV M+ G + +
Sbjct: 220 KKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV 279
Query: 276 -REKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLA 334
+ P GL +LH++ II+RD+K NVLLDD + D GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 335 KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
L + T GT G +APE L + D F G+ L E+I
Sbjct: 337 VELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGDGTV-------LAVKRLKDMISLAVH----- 243
E + A E + LG G FG VY+G + G V +A+K + + S+
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 244 ----------RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWN-------T 285
+++RL+G + L++ M+ G + S LR +P ++ N
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 286 RKRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343
K I + A G+ YL+ K +HRD+ A N + + +GDFG+ + + +D +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD-Y 180
Query: 344 VTTAVRGT--VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+G V ++PE L G + +DV+ FG++L E+ T
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 33/210 (15%)
Query: 200 ATENFSSKNILGAGGFGNVYKGK---------------------LGDGTVLAVKRLKDMI 238
AT + +G G +G VYK + L TV V L+ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 239 SLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR------EKPALDWNTRKRIAIG 292
+ H N++RL+ CAT + + V LR P L T K +
Sbjct: 62 AFE-HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 293 AARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
RGL +LH C I+HRD+K N+L+ + DFGLA++ + + V T+
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TL 175
Query: 353 GHIAPEYLSTGQSSEKTDVFGFGILLLELI 382
+ APE L + D++ G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 210 LGAGGFGNVYKGKL---GD--GTVLAVKRLK---------------DMISLAVHRNLLRL 249
LG G FG V + GD G +AVK LK +++ H N+++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 250 IGYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDP 306
G C L+ ++ +GS+ L + K ++ + + A+ +G+ YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR--- 145
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+ +HRD+ A NVL++ + +GDFGL K + D V V APE L +
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 365 SSEKTDVFGFGILLLELIT 383
+DV+ FG+ L EL+T
Sbjct: 206 FYIASDVWSFGVTLHELLT 224
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 33/210 (15%)
Query: 200 ATENFSSKNILGAGGFGNVYKGK---------------------LGDGTVLAVKRLKDMI 238
AT + +G G +G VYK + L TV V L+ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 239 SLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR------EKPALDWNTRKRIAIG 292
+ H N++RL+ CAT + + V LR P L T K +
Sbjct: 62 AFE-HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 293 AARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
RGL +LH C I+HRD+K N+L+ + DFGLA++ + + V T+
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TL 175
Query: 353 GHIAPEYLSTGQSSEKTDVFGFGILLLELI 382
+ APE L + D++ G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 34/234 (14%)
Query: 197 LQQATENFSSKNILGAGGFGNVYKGK--LGDGTVLAVKRLK-----------DMISLAV- 242
L +A + + +G G +G V+K + G +A+KR++ + +AV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 243 -------HRNLLRLIGYCAT-----PTERLLVYPYMSNGSVASRLRE--KPALDWNTRKR 288
H N++RL C T+ LV+ ++ + + + L + +P + T K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+ RGL +LH +++HRD+K N+L+ + + DFGLA++ +S T+V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTSV 179
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
T+ + APE L + D++ G + E+ ++Q G +L+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 233
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 94/230 (40%), Gaps = 29/230 (12%)
Query: 180 EEGLISLGNLRNFTFRELQ---QATENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKR-- 233
+E L SL LR ++ L+ + F +LG GGFG V+ ++ G + A K+
Sbjct: 160 QEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLN 219
Query: 234 --------------LKDMISLAVHRNLLRLIGYC-ATPTERLLVYPYMSNGSVASRL--- 275
++ I VH + + Y T T+ LV M+ G + +
Sbjct: 220 KKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV 279
Query: 276 -REKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLA 334
+ P GL +LH++ II+RD+K NVLLDD + D GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 335 KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
L + T GT G +APE L + D F G+ L E+I
Sbjct: 337 VELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 31/200 (15%)
Query: 204 FSSKNILGAGGFGNVYKGK-LGDGTVLAVKRL-----------KDMISLAV------HRN 245
FS +G G FG VY + + + V+A+K++ +D+I H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 246 LLRLIG-YCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
++ G Y T L++ + + S + +KP + + GA +GL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA-VTHGALQGLAYLHSH- 134
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY---LS 361
+IHRDVKA N+LL + +GDFG A ++ ++ V GT +APE +
Sbjct: 135 --NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMD 187
Query: 362 TGQSSEKTDVFGFGILLLEL 381
GQ K DV+ GI +EL
Sbjct: 188 EGQYDGKVDVWSLGITCIEL 207
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 94/230 (40%), Gaps = 29/230 (12%)
Query: 180 EEGLISLGNLRNFTFRELQ---QATENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKR-- 233
+E L SL LR ++ L+ + F +LG GGFG V+ ++ G + A K+
Sbjct: 160 QEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLN 219
Query: 234 --------------LKDMISLAVHRNLLRLIGYC-ATPTERLLVYPYMSNGSVASRL--- 275
++ I VH + + Y T T+ LV M+ G + +
Sbjct: 220 KKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNV 279
Query: 276 -REKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLA 334
+ P GL +LH++ II+RD+K NVLLDD + D GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 335 KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
L + T GT G +APE L + D F G+ L E+I
Sbjct: 337 VELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 28/199 (14%)
Query: 210 LGAGGFGNVYKGKL---GD--GTVLAVKRLK---------------DMISLAVHRNLLRL 249
LG G FG V + GD G +AVK LK +++ H N+++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 250 IGYCATPTER--LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDP 306
G C L+ ++ +GS+ L + K ++ + + A+ +G+ YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR--- 133
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+ +HRD+ A NVL++ + +GDFGL K + D V V APE L +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 365 SSEKTDVFGFGILLLELIT 383
+DV+ FG+ L EL+T
Sbjct: 194 FYIASDVWSFGVTLHELLT 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 210 LGAGGFGNVYKGKL-GDGTVLAVKRLKDMIS-----------LAVHRNLLRLIGYCATP- 256
+G G +G V++G G+ + + +D S + H N+L I T
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 257 ---TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH-----EQCDPKI 308
T+ L+ Y GS+ L + LD + RI + A GL +LH Q P I
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAI 134
Query: 309 IHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVG---HIAPEYLSTG-- 363
HRD+K+ N+L+ + + D GLA + S + + VG ++APE L
Sbjct: 135 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQ 194
Query: 364 ----QSSEKTDVFGFGILLLELITGM 385
S ++ D++ FG++L E+ M
Sbjct: 195 VDCFDSYKRVDIWAFGLVLWEVARRM 220
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 34/234 (14%)
Query: 197 LQQATENFSSKNILGAGGFGNVYKGK--LGDGTVLAVKRLK-----------DMISLAV- 242
L +A + + +G G +G V+K + G +A+KR++ + +AV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 243 -------HRNLLRLIGYCAT-----PTERLLVYPYMSNGSVASRLRE--KPALDWNTRKR 288
H N++RL C T+ LV+ ++ + + + L + +P + T K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+ RGL +LH +++HRD+K N+L+ + + DFGLA++ +S T+V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI--YSFQMALTSV 179
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
T+ + APE L + D++ G + E+ ++Q G +L+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 233
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 210 LGAGGFGNVYKGKL-GDGTVLAVKRLKDMIS-----------LAVHRNLLRLIGYCATP- 256
+G G +G V++G G+ + + +D S + H N+L I T
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 104
Query: 257 ---TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH-----EQCDPKI 308
T+ L+ Y GS+ L + LD + RI + A GL +LH Q P I
Sbjct: 105 HSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAI 163
Query: 309 IHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVG---HIAPEYLSTG-- 363
HRD+K+ N+L+ + + D GLA + S + + VG ++APE L
Sbjct: 164 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQ 223
Query: 364 ----QSSEKTDVFGFGILLLELITGM 385
S ++ D++ FG++L E+ M
Sbjct: 224 VDCFDSYKRVDIWAFGLVLWEVARRM 249
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 49/220 (22%)
Query: 210 LGAGGFGNVYKGK------LGDGTVLAVKRLKDMISLAVHR---------------NLLR 248
+G G FG V++ + T++AVK LK+ S + N+++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRLREKPAL--------DWNTRKR------------ 288
L+G CA L++ YM+ G + LR D +TR R
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 289 ----IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344
IA A G+ YL E+ K +HRD+ N L+ + + DFGL++ + +D +
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 345 TTAVRGT-VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+ + PE + + + ++DV+ +G++L E+ +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 26/202 (12%)
Query: 202 ENFSSKNILGAGGFGNVY--KGKLGDGTVLAVKRLKD--------------MISLAVHRN 245
+ F +LG+G F V+ K +L G + A+K +K ++ H N
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
++ L + T LV +S G + R+ E+ + + YLHE
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN-- 125
Query: 306 PKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLST 362
I+HRD+K N+L ++ + ++ DFGL+K+ + + + GT G++APE L+
Sbjct: 126 -GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQ 181
Query: 363 GQSSEKTDVFGFGILLLELITG 384
S+ D + G++ L+ G
Sbjct: 182 KPYSKAVDCWSIGVITYILLCG 203
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 210 LGAGGFGNVYKGKL-GDGTVLAVKRLKDMIS-----------LAVHRNLLRLIGYCATP- 256
+G G +G V++G G+ + + +D S + H N+L I T
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 257 ---TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH-----EQCDPKI 308
T+ L+ Y GS+ L + LD + RI + A GL +LH Q P I
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAI 134
Query: 309 IHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVG---HIAPEYLSTG-- 363
HRD+K+ N+L+ + + D GLA + S + + VG ++APE L
Sbjct: 135 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQ 194
Query: 364 ----QSSEKTDVFGFGILLLELITGM 385
S ++ D++ FG++L E+ M
Sbjct: 195 VDCFDSYKRVDIWAFGLVLWEVARRM 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 186 LGNLRNFTFRELQQATENFSSKNILGAGGFGNVY---------------------KGKLG 224
LG + +++ + + + +++LG G F V +GK G
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 225 --DGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD 282
+ + + ++K H N++ L + L+ +S G + R+ EK
Sbjct: 62 SMENEIAVLHKIK-------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT 114
Query: 283 WNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVL---LDDFCEAIVGDFGLAKLLDH 339
R+ + YLH D I+HRD+K N+L LD+ + ++ DFGL+K+ D
Sbjct: 115 ERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
S ++TA GT G++APE L+ S+ D + G++ L+ G
Sbjct: 172 G-SVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 21/205 (10%)
Query: 197 LQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISL 240
Q E + +G G +G VYK K G ++A+KR++ ++
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 241 AVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYL 300
H N++ LI + LV+ +M K L + K RG+ +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
H+ +I+HRD+K N+L++ + DFGLA+ T V T+ + AP+ L
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV-VTLWYRAPDVL 191
Query: 361 -STGQSSEKTDVFGFGILLLELITG 384
+ + S D++ G + E+ITG
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 21/205 (10%)
Query: 197 LQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISL 240
Q E + +G G +G VYK K G ++A+KR++ ++
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 241 AVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYL 300
H N++ LI + LV+ +M K L + K RG+ +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
H+ +I+HRD+K N+L++ + DFGLA+ T V T+ + AP+ L
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV-VTLWYRAPDVL 191
Query: 361 -STGQSSEKTDVFGFGILLLELITG 384
+ + S D++ G + E+ITG
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 33/210 (15%)
Query: 200 ATENFSSKNILGAGGFGNVYKGK---------------------LGDGTVLAVKRLKDMI 238
AT + +G G +G VYK + L TV V L+ +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 239 SLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR------EKPALDWNTRKRIAIG 292
+ H N++RL+ CAT + + V LR P L T K +
Sbjct: 62 AFE-HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 293 AARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
RGL +LH C I+HRD+K N+L+ + DFGLA++ +S V T+
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI--YSYQMALDPVVVTL 175
Query: 353 GHIAPEYLSTGQSSEKTDVFGFGILLLELI 382
+ APE L + D++ G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 210 LGAGGFGNVY-----KGKLGDGTVLAVKRLKD---------------MISLAVHRNLLRL 249
LG G FG V G G ++AVK LK+ ++ H ++++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 250 IGYCATPTER--LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C E+ LV Y+ GS+ L + + A G+ YLH Q
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQ---H 132
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTGQS 365
IHR + A NVLLD+ +GDFGLAK + + G V APE L +
Sbjct: 133 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKF 192
Query: 366 SEKTDVFGFGILLLELIT 383
+DV+ FG+ L EL+T
Sbjct: 193 YYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 210 LGAGGFGNVY-----KGKLGDGTVLAVKRLKD---------------MISLAVHRNLLRL 249
LG G FG V G G ++AVK LK+ ++ H ++++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 250 IGYCATPTER--LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPK 307
G C E+ LV Y+ GS+ L + + A G+ YLH Q
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQICEGMAYLHAQ---H 131
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTGQS 365
IHR + A NVLLD+ +GDFGLAK + + G V APE L +
Sbjct: 132 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKF 191
Query: 366 SEKTDVFGFGILLLELIT 383
+DV+ FG+ L EL+T
Sbjct: 192 YYASDVWSFGVTLYELLT 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 239 SLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLL 298
+A H +++ LI + + LV+ M G + L EK AL + I +
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVS 214
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+LH I+HRD+K N+LLDD + + DFG + L+ + + GT G++APE
Sbjct: 215 FLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPE 269
Query: 359 YLSTGQSS------EKTDVFGFGILLLELITG 384
L ++ D++ G++L L+ G
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 186 LGNLRNFTFRELQQATENFSSKNILGAGGFGNVY---------------------KGKLG 224
LG + +++ + + + +++LG G F V +GK G
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 225 --DGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD 282
+ + + ++K H N++ L + L+ +S G + R+ EK
Sbjct: 62 SMENEIAVLHKIK-------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT 114
Query: 283 WNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVL---LDDFCEAIVGDFGLAKLLDH 339
R+ + YLH D I+HRD+K N+L LD+ + ++ DFGL+K+ D
Sbjct: 115 ERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
S ++TA GT G++APE L+ S+ D + G++ L+ G
Sbjct: 172 G-SVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 117/291 (40%), Gaps = 59/291 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------MISLAV------HRNLL 247
LGAG FG V + K +AVK LK M L V H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREK----------PAL--------DWNTRKRI 289
L+G C L++ Y G + + LR K PA+ D
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-V 348
+ A+G+ +L + IHRD+ A N+LL + DFGLA+ + + ++V
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
R V +APE + + ++DV+ +GI L EL + + G ++ K +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM------- 283
Query: 409 XXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
R L + E+ +I++ C P+ RP ++V+++E
Sbjct: 284 -----IKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 117/291 (40%), Gaps = 59/291 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------MISLAV------HRNLL 247
LGAG FG V + K +AVK LK M L V H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREK----------PAL--------DWNTRKRI 289
L+G C L++ Y G + + LR K PA+ D
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-V 348
+ A+G+ +L + IHRD+ A N+LL + DFGLA+ + + ++V
Sbjct: 167 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
R V +APE + + ++DV+ +GI L EL + + G ++ K +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM------- 276
Query: 409 XXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
R L + E+ +I++ C P+ RP ++V+++E
Sbjct: 277 -----IKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 319
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 38/225 (16%)
Query: 186 LGNLRNFTFRELQQATENFSSKNILGAGGFGNVY---------------------KGKLG 224
LG + +++ + + + +++LG G F V +GK G
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 225 --DGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD 282
+ + + ++K H N++ L + L+ +S G + R+ EK
Sbjct: 62 SMENEIAVLHKIK-------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT 114
Query: 283 WNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVL---LDDFCEAIVGDFGLAKLLDH 339
R+ + YLH D I+HRD+K N+L LD+ + ++ DFGL+K+ D
Sbjct: 115 ERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
S ++TA GT G++APE L+ S+ D + G++ L+ G
Sbjct: 172 G-SVLSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 120
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 121 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 117/291 (40%), Gaps = 59/291 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------MISLAV------HRNLL 247
LGAG FG V + K +AVK LK M L V H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREK----------PAL--------DWNTRKRI 289
L+G C L++ Y G + + LR K PA+ D
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-V 348
+ A+G+ +L + IHRD+ A N+LL + DFGLA+ + + ++V
Sbjct: 151 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
R V +APE + + ++DV+ +GI L EL + + G ++ K +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM------- 260
Query: 409 XXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
R L + E+ +I++ C P+ RP ++V+++E
Sbjct: 261 -----IKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 303
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 43/232 (18%)
Query: 184 ISLG--NLRNFTFRELQQATENFSSKNI------LGAGGFGNVYKGKLGDGTVLAVKRLK 235
+ LG NL + ++ + T + + ++ LG G FG VYK + + +VLA ++
Sbjct: 11 VDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI 70
Query: 236 D----------MISLAV-----HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE--K 278
D M+ + + H N+++L+ ++ + + G+V + + E +
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER 130
Query: 279 PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLA---- 334
P T +I + + L L+ D KIIHRD+KA N+L + + DFG++
Sbjct: 131 PL----TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
Query: 335 KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE-----KTDVFGFGILLLEL 381
+ + D + GT +APE + S + K DV+ GI L+E+
Sbjct: 187 RXIQRRDXFI-----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 118/285 (41%), Gaps = 54/285 (18%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 248 RLIGYCATPTERLLV-YPYMSNGSVASRLREKP---------ALDWNTRKRI---AIGAA 294
L+G C P L+V + G++++ LR K D+ T + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VRGTVG 353
+G+ +L + K IHRD+ A N+LL + + DFGLA+ + +V R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 354 HIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXX 413
+APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------------FXRR 259
Query: 414 XXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 260 LKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 54/285 (18%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 248 RLIGYCATPTERLLV-YPYMSNGSVASRLREKP---------ALDWNTRKRI---AIGAA 294
L+G C P L+V + G++++ LR K D+ T + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VRGTVG 353
+G+ +L + K IHRD+ A N+LL + + DFGLA+ + +V R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 354 HIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXX 413
+APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC------------RR 259
Query: 414 XXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 260 LKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 117/291 (40%), Gaps = 59/291 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------MISLAV------HRNLL 247
LGAG FG V + K +AVK LK M L V H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREK----------PAL--------DWNTRKRI 289
L+G C L++ Y G + + LR K PA+ D
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-V 348
+ A+G+ +L + IHRD+ A N+LL + DFGLA+ + + ++V
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
R V +APE + + ++DV+ +GI L EL + + G ++ K +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM------- 283
Query: 409 XXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
R L + E+ +I++ C P+ RP ++V+++E
Sbjct: 284 -----IKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++ G+ + L Y S G + R+ + +R G++YLH
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLS 361
I HRD+K N+LLD+ + DFGLA + +++ + + GT+ ++APE L
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 362 TGQ-SSEKTDVFGFGILLLELITG 384
+ +E DV+ GI+L ++ G
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVG---DFGLAKLLDHSDSHVTTAVRGTV 352
L YLHE +IIHRD+K N++L + ++ D G AK LD + + T GT+
Sbjct: 134 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTL 188
Query: 353 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGMR 386
++APE L + + D + FG L E ITG R
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVG---DFGLAKLLDHSDSHVTTAVRGTV 352
L YLHE +IIHRD+K N++L + ++ D G AK LD + + T GT+
Sbjct: 133 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTL 187
Query: 353 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGMR 386
++APE L + + D + FG L E ITG R
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 117/291 (40%), Gaps = 59/291 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------MISLAV------HRNLL 247
LGAG FG V + K +AVK LK M L V H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREK----------PAL--------DWNTRKRI 289
L+G C L++ Y G + + LR K PA+ D
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-V 348
+ A+G+ +L + IHRD+ A N+LL + DFGLA+ + + ++V
Sbjct: 169 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
R V +APE + + ++DV+ +GI L EL + + G ++ K +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM------- 278
Query: 409 XXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLE 459
R L + E+ +I++ C P+ RP ++V+++E
Sbjct: 279 -----IKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 321
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 24/217 (11%)
Query: 187 GNLRNFTFRELQQATENFSSKNILGAGGFGNVY------KGKLGDGTVLAVKRLKD---- 236
G + +++ + + + +++LG G F V KL +A K L+
Sbjct: 3 GAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS 62
Query: 237 ------MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++ H N++ L + L+ +S G + R+ EK R+
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVL---LDDFCEAIVGDFGLAKLLDHSDSHVTTA 347
+ YLH D I+HRD+K N+L LD+ + ++ DFGL+K+ D S ++TA
Sbjct: 123 FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG-SVLSTA 178
Query: 348 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT G++APE L+ S+ D + G++ L+ G
Sbjct: 179 C-GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
++R+IG C + +LV G + L++ + + + G+ YL E
Sbjct: 432 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-- 488
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTG 363
+HRD+ A NVLL A + DFGL+K L +++ G V APE ++
Sbjct: 489 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 364 QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+ S K+DV+ FG+L+ E + + G ++ AMLE
Sbjct: 548 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
++R+IG C + +LV G + L++ + + + G+ YL E
Sbjct: 433 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-- 489
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTG 363
+HRD+ A NVLL A + DFGL+K L +++ G V APE ++
Sbjct: 490 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 364 QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+ S K+DV+ FG+L+ E + + G ++ AMLE
Sbjct: 549 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 587
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 82/203 (40%), Gaps = 26/203 (12%)
Query: 204 FSSKNILGAGGFGNVYKGKL-GDGTVLAVKR----------------LKDMISLAVHRNL 246
F +LG GGFG V+ ++ G + A K+ ++ I VH
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 247 LRLIGYC-ATPTERLLVYPYMSNGSVASRL----REKPALDWNTRKRIAIGAARGLLYLH 301
+ + Y T T+ LV M+ G + + + P GL +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
++ II+RD+K NVLLDD + D GLA L + T GT G +APE L
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLL 362
Query: 362 TGQSSEKTDVFGFGILLLELITG 384
+ D F G+ L E+I
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAA 385
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKDMISLAV-------- 242
R+ + E +G G FG+V++G +A+K K+ S +V
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 243 -------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-EKPALDWNTRKRIAIGAA 294
H ++++LIG T ++ + G + S L+ K +LD + A +
Sbjct: 63 LTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
L YL + + +HRD+ A NVL+ +GDFGL++ ++ S + + + +
Sbjct: 122 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELI 382
+APE ++ + + +DV+ FG+ + E++
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
++R+IG C + +LV G + L++ + + + G+ YL E
Sbjct: 88 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-- 144
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTG 363
+HRD+ A NVLL A + DFGL+K L +++ G V APE ++
Sbjct: 145 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 364 QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+ S K+DV+ FG+L+ E + + G ++ AMLE
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 116/288 (40%), Gaps = 57/288 (19%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 248 RLIGYCATPTERLLV-YPYMSNGSVASRLREKP------------ALDWNTRKRI---AI 291
L+G C P L+V + G++++ LR K D+ T + + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 292 GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VRG 350
A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + V R
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 351 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXX 410
+ +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC----------- 261
Query: 411 XXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 262 -RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKDMISLAV-------- 242
R+ + E +G G FG+V++G +A+K K+ S +V
Sbjct: 31 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 243 -------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-EKPALDWNTRKRIAIGAA 294
H ++++LIG T ++ + G + S L+ K +LD + A +
Sbjct: 91 LTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 149
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
L YL + + +HRD+ A NVL+ +GDFGL++ ++ S + + + +
Sbjct: 150 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 206
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELI 382
+APE ++ + + +DV+ FG+ + E++
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 56/287 (19%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 248 RLIGYCATPTERLLV-YPYMSNGSVASRLREKP-----------ALDWNTRKRI---AIG 292
L+G C P L+V + G++++ LR K D+ T + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 293 AARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VRGT 351
A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + V R
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 352 VGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXX 411
+ +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC------------ 261
Query: 412 XXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 262 RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
++R+IG C + +LV G + L++ + + + G+ YL E
Sbjct: 68 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-- 124
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTG 363
+HRD+ A NVLL A + DFGL+K L +++ G V APE ++
Sbjct: 125 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 364 QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+ S K+DV+ FG+L+ E + + G ++ AMLE
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 222
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKDMISLAV-------- 242
R+ + E +G G FG+V++G +A+K K+ S +V
Sbjct: 6 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 65
Query: 243 -------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-EKPALDWNTRKRIAIGAA 294
H ++++LIG T ++ + G + S L+ K +LD + A +
Sbjct: 66 LTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 124
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
L YL + + +HRD+ A NVL+ +GDFGL++ ++ S + + + +
Sbjct: 125 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 181
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELI 382
+APE ++ + + +DV+ FG+ + E++
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 58/289 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 248 RLIGYCATPTERLLV-YPYMSNGSVASRLREKP-------------ALDWNTRKRI---A 290
L+G C P L+V + G++++ LR K D+ T + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VR 349
A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + +V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 350 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXX 409
+ +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC---------- 261
Query: 410 XXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 262 --RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKDMISLAV-------- 242
R+ + E +G G FG+V++G +A+K K+ S +V
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 243 -------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-EKPALDWNTRKRIAIGAA 294
H ++++LIG T ++ + G + S L+ K +LD + A +
Sbjct: 65 LTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 123
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
L YL + + +HRD+ A NVL+ +GDFGL++ ++ S + + + +
Sbjct: 124 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 180
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELI 382
+APE ++ + + +DV+ FG+ + E++
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKDMISLAV-------- 242
R+ + E +G G FG+V++G +A+K K+ S +V
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 243 -------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-EKPALDWNTRKRIAIGAA 294
H ++++LIG T ++ + G + S L+ K +LD + A +
Sbjct: 63 LTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
L YL + + +HRD+ A NVL+ +GDFGL++ ++ S + + + +
Sbjct: 122 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELI 382
+APE ++ + + +DV+ FG+ + E++
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
++R+IG C + +LV G + L++ + + + G+ YL E
Sbjct: 74 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-- 130
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTG 363
+HRD+ A NVLL A + DFGL+K L +++ G V APE ++
Sbjct: 131 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 364 QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+ S K+DV+ FG+L+ E + + G ++ AMLE
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKDMISLAV-------- 242
R+ + E +G G FG+V++G +A+K K+ S +V
Sbjct: 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 243 -------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-EKPALDWNTRKRIAIGAA 294
H ++++LIG T ++ + G + S L+ K +LD + A +
Sbjct: 68 LTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 126
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
L YL + + +HRD+ A NVL+ +GDFGL++ ++ S + + + +
Sbjct: 127 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 183
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELI 382
+APE ++ + + +DV+ FG+ + E++
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVK-----------RLKDMIS--LAVHRNLLRLIGY---- 252
+G G +G V+ GK G +AVK R ++ L H N+L I
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 253 CATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE-----QCDPK 307
+ T+ L+ Y NGS+ L+ LD + ++A + GL +LH Q P
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA 162
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAK--LLDHSDSHVTTAVR-GTVGHIAPEYLSTG- 363
I HRD+K+ N+L+ + D GLA + D ++ + R GT ++ PE L
Sbjct: 163 IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESL 222
Query: 364 -----QSSEKTDVFGFGILLLEL 381
QS D++ FG++L E+
Sbjct: 223 NRNHFQSYIMADMYSFGLILWEV 245
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
++R+IG C + +LV G + L++ + + + G+ YL E
Sbjct: 90 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-- 146
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTG 363
+HRD+ A NVLL A + DFGL+K L +++ G V APE ++
Sbjct: 147 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 364 QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+ S K+DV+ FG+L+ E + + G ++ AMLE
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
++R+IG C + +LV G + L++ + + + G+ YL E
Sbjct: 90 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-- 146
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTG 363
+HRD+ A NVLL A + DFGL+K L +++ G V APE ++
Sbjct: 147 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 364 QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+ S K+DV+ FG+L+ E + + G ++ AMLE
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 58/289 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 248 RLIGYCATPTERLLV-YPYMSNGSVASRLREKP-------------ALDWNTRKRI---A 290
L+G C P L+V + G++++ LR K D+ T + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VR 349
A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + +V R
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 350 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXX 409
+ +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC---------- 263
Query: 410 XXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 264 --RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKDMISLAV-------- 242
R+ + E +G G FG+V++G +A+K K+ S +V
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 243 -------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-EKPALDWNTRKRIAIGAA 294
H ++++LIG T ++ + G + S L+ K +LD + A +
Sbjct: 63 LTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
L YL + + +HRD+ A NVL+ +GDFGL++ ++ S + + + +
Sbjct: 122 TALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELI 382
+APE ++ + + +DV+ FG+ + E++
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
++R+IG C + +LV G + L++ + + + G+ YL E
Sbjct: 80 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-- 136
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTG 363
+HRD+ A NVLL A + DFGL+K L +++ G V APE ++
Sbjct: 137 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 364 QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+ S K+DV+ FG+L+ E + + G ++ AMLE
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 55/227 (24%)
Query: 203 NFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKDM----------ISLAVHRNLLRLIG 251
+F +LG G FG V K + D A+K+++ + L N ++
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 252 YCATPTER----------------LLVYPYMSNGSV-----ASRLREKPALDWNTRKRIA 290
Y A ER + Y N ++ + L ++ W ++I
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS------DSH- 343
L Y+H Q IIHR++K N+ +D+ +GDFGLAK + S DS
Sbjct: 127 ----EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 344 -------VTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGILLLELI 382
+T+A+ GT ++A E L TG +EK D + GI+ E I
Sbjct: 180 LPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 39/210 (18%)
Query: 210 LGAGGFGNVYKGKL------GDGTVLAVKRLKD--------------MISLAVHRNLLRL 249
LG G FG V+ + D ++AVK LK+ ++++ H++++R
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 250 IGYCATPTERLLVYPYMSNGSVASRLR------------EKPA---LDWNTRKRIAIGAA 294
G C L+V+ YM +G + LR E A L +A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVG 353
G++YL +HRD+ N L+ +GDFG+++ + +D + V +
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 354 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+ PE + + + ++DV+ FG++L E+ T
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
++R+IG C + +LV G + L++ + + + G+ YL E
Sbjct: 70 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-- 126
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGT--VGHIAPEYLSTG 363
+HRD+ A NVLL A + DFGL+K L +++ G V APE ++
Sbjct: 127 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 364 QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+ S K+DV+ FG+L+ E + + G ++ AMLE
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 58/289 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 248 RLIGYCATPTERLLVY-PYMSNGSVASRLREKP-------------ALDWNTRKRI---A 290
L+G C P L+V + G++++ LR K D+ T + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VR 349
A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + +V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 350 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXX 409
+ +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC---------- 252
Query: 410 XXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 253 --RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 39/213 (18%)
Query: 210 LGAGGFGNVYKG--KLGDGTV-LAVKRLK---------DMISLA--VHR----NLLRLIG 251
LG G FG+V +G ++ + +A+K LK +M+ A +H+ ++RLIG
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 252 YCATPTERLLVYPYMSNGS-----VASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDP 306
C E L++ M+ G + + E P + + + G+ YL E+
Sbjct: 78 VCQA--EALMLVMEMAGGGPLHKFLVGKREEIPV---SNVAELLHQVSMGMKYLEEK--- 129
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT--TAVRGTVGHIAPEYLSTGQ 364
+HRD+ A NVLL + A + DFGL+K L DS+ T +A + + APE ++ +
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 365 SSEKTDVFGFGILLLELITGMRALEFGKSINQK 397
S ++DV+ +G+ + E AL +G+ +K
Sbjct: 190 FSSRSDVWSYGVTMWE------ALSYGQKPYKK 216
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 58/289 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 248 RLIGYCATPTERLLVY-PYMSNGSVASRLREKP-------------ALDWNTRKRI---A 290
L+G C P L+V + G++++ LR K D+ T + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VR 349
A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + +V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 350 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXX 409
+ +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC---------- 252
Query: 410 XXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 253 --RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 117/289 (40%), Gaps = 58/289 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 248 RLIGYCATPTERLLV-YPYMSNGSVASRLREKP-------------ALDWNTRKRI---A 290
L+G C P L+V + G++++ LR K D+ T + + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VR 349
A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + +V R
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 350 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXX 409
+ +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC---------- 298
Query: 410 XXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 299 --RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 180 EEGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLK 235
EE ++ + R++ E+Q+ E +G G FG+V++G +A+K K
Sbjct: 373 EEDTYTMPSTRDY---EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK 427
Query: 236 DMISLAV---------------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-EKP 279
+ S +V H ++++LIG T ++ + G + S L+ K
Sbjct: 428 NCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKF 486
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339
+LD + A + L YL + + +HRD+ A NVL+ +GDFGL++ ++
Sbjct: 487 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543
Query: 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 382
S + + + + +APE ++ + + +DV+ FG+ + E++
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 39/210 (18%)
Query: 210 LGAGGFGNVYKGKL------GDGTVLAVKRLKD--------------MISLAVHRNLLRL 249
LG G FG V+ + D ++AVK LK+ ++++ H++++R
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 250 IGYCATPTERLLVYPYMSNGSVASRLR------------EKPA---LDWNTRKRIAIGAA 294
G C L+V+ YM +G + LR E A L +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVG 353
G++YL +HRD+ N L+ +GDFG+++ + +D + V +
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 354 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+ PE + + + ++DV+ FG++L E+ T
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 116/289 (40%), Gaps = 58/289 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 248 RLIGYCATPTERLLV-YPYMSNGSVASRLREKP-------------ALDWNTRKRI---A 290
L+G C P L+V + G++++ LR K D+ T + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VR 349
A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 350 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXX 409
+ +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC---------- 261
Query: 410 XXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 262 --RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 180 EEGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLK 235
EE ++ + R++ E+Q+ E +G G FG+V++G +A+K K
Sbjct: 373 EEDTYTMPSTRDY---EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK 427
Query: 236 DMISLAV---------------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-EKP 279
+ S +V H ++++LIG T ++ + G + S L+ K
Sbjct: 428 NCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKF 486
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339
+LD + A + L YL + + +HRD+ A NVL+ +GDFGL++ ++
Sbjct: 487 SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 543
Query: 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 382
S + + + + +APE ++ + + +DV+ FG+ + E++
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 243 HRNLLRLIGYCATPTER--LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYL 300
H N+++L+ P E +V+ ++ G V KP + R +G+ YL
Sbjct: 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ-DLIKGIEYL 153
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
H Q KIIHRD+K +N+L+ + + DFG++ SD+ ++ V GT +APE L
Sbjct: 154 HYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV-GTPAFMAPESL 209
Query: 361 STGQ---SSEKTDVFGFGILLLELITG 384
S + S + DV+ G+ L + G
Sbjct: 210 SETRKIFSGKALDVWAMGVTLYCFVFG 236
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 32/230 (13%)
Query: 184 ISLGNLRNFTFRELQQATEN-FSSKNILGAGGFGNVYK------GKL------------- 223
I + + E Q T+N F +LG GGFG V GK+
Sbjct: 165 IYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 224 --GDGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPAL 281
G+ L K++ + ++ R ++ L T LV M+ G + +
Sbjct: 225 RKGEAMALNEKQILEKVN---SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA 281
Query: 282 DWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339
+ + + A GL LH + +I++RD+K N+LLDD + D GLA +
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHV 336
Query: 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ GTVG++APE + + + D + G LL E+I G +
Sbjct: 337 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 39/210 (18%)
Query: 210 LGAGGFGNVYKGKL------GDGTVLAVKRLKD--------------MISLAVHRNLLRL 249
LG G FG V+ + D ++AVK LK+ ++++ H++++R
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 250 IGYCATPTERLLVYPYMSNGSVASRLR------------EKPA---LDWNTRKRIAIGAA 294
G C L+V+ YM +G + LR E A L +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVG 353
G++YL +HRD+ N L+ +GDFG+++ + +D + V +
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 354 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+ PE + + + ++DV+ FG++L E+ T
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
++R+IG C + +LV G + L++ + + + G+ YL E
Sbjct: 74 IVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-- 130
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTVGHIAPEYLSTG 363
+HRD+ A NVLL A + DFGL+K L D + T + V APE ++
Sbjct: 131 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 364 QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
+ S K+DV+ FG+L+ E + + G ++ AMLE
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 32/230 (13%)
Query: 184 ISLGNLRNFTFRELQQATEN-FSSKNILGAGGFGNVYK------GKL------------- 223
I + + E Q T+N F +LG GGFG V GK+
Sbjct: 165 IYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 224 --GDGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPAL 281
G+ L K++ + ++ R ++ L T LV M+ G + +
Sbjct: 225 RKGEAMALNEKQILEKVN---SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA 281
Query: 282 DWNTRKRIAIGA--ARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339
+ + + A GL LH + +I++RD+K N+LLDD + D GLA +
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHV 336
Query: 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389
+ GTVG++APE + + + D + G LL E+I G +
Sbjct: 337 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVHRN-------LLR---LIGYCA----- 254
+G G FG V++GK G +AVK + R +LR ++G+ A
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 108
Query: 255 --TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH-----EQCDPK 307
T T+ LV Y +GS+ L + + ++A+ A GL +LH Q P
Sbjct: 109 NGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 167
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVG---HIAPEYLSTG- 363
I HRD+K+ N+L+ + D GLA D + + A VG ++APE L
Sbjct: 168 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 227
Query: 364 -----QSSEKTDVFGFGILLLEL 381
+S ++ D++ G++ E+
Sbjct: 228 NMKHFESFKRADIYAMGLVFWEI 250
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 32/228 (14%)
Query: 179 QEEGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK-- 235
++ G +++G R Q + + +G+G G V+K + G V+AVK+++
Sbjct: 8 KQTGYLTIGGQR------YQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS 61
Query: 236 -----------DM-ISLAVHR--NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPAL 281
D+ + L H +++ G T T+ + M + + R + +
Sbjct: 62 GNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPI 121
Query: 282 DWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341
++ + + L YL E+ +IHRDVK +N+LLD+ + + DFG++ L D
Sbjct: 122 PERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRL--VD 177
Query: 342 SHVTTAVRGTVGHIAPEYLSTGQSSE-----KTDVFGFGILLLELITG 384
G ++APE + ++ + DV+ GI L+EL TG
Sbjct: 178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG 225
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVHRN-------LLR---LIGYCA----- 254
+G G FG V++GK G +AVK + R +LR ++G+ A
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 70
Query: 255 --TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH-----EQCDPK 307
T T+ LV Y +GS+ L + + ++A+ A GL +LH Q P
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 129
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVG---HIAPEYLSTG- 363
I HRD+K+ N+L+ + D GLA D + + A VG ++APE L
Sbjct: 130 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 189
Query: 364 -----QSSEKTDVFGFGILLLEL 381
+S ++ D++ G++ E+
Sbjct: 190 NMKHFESFKRADIYAMGLVFWEI 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVHRN-------LLR---LIGYCA----- 254
+G G FG V++GK G +AVK + R +LR ++G+ A
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 95
Query: 255 --TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH-----EQCDPK 307
T T+ LV Y +GS+ L + + ++A+ A GL +LH Q P
Sbjct: 96 NGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 154
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVG---HIAPEYLSTG- 363
I HRD+K+ N+L+ + D GLA D + + A VG ++APE L
Sbjct: 155 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 214
Query: 364 -----QSSEKTDVFGFGILLLEL 381
+S ++ D++ G++ E+
Sbjct: 215 NMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVHRN-------LLR---LIGYCA----- 254
+G G FG V++GK G +AVK + R +LR ++G+ A
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 75
Query: 255 --TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH-----EQCDPK 307
T T+ LV Y +GS+ L + + ++A+ A GL +LH Q P
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 134
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVG---HIAPEYLSTG- 363
I HRD+K+ N+L+ + D GLA D + + A VG ++APE L
Sbjct: 135 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 194
Query: 364 -----QSSEKTDVFGFGILLLEL 381
+S ++ D++ G++ E+
Sbjct: 195 NMKHFESFKRADIYAMGLVFWEI 217
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKDMISLAV-------- 242
R+ + E +G G FG+V++G +A+K K+ S +V
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 243 -------HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-EKPALDWNTRKRIAIGAA 294
H ++++LIG T ++ + G + S L+ K +LD + A +
Sbjct: 63 LTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
L YL + + +HRD+ A NVL+ +GDFGL++ ++ S + + +
Sbjct: 122 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKW 178
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELI 382
+APE ++ + + +DV+ FG+ + E++
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 116/289 (40%), Gaps = 58/289 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 248 RLIGYCATPTERLLVY-PYMSNGSVASRLREKP-------------ALDWNTRKRI---A 290
L+G C P L+V + G++++ LR K D+ T + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VR 349
A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 350 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXX 409
+ +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC---------- 252
Query: 410 XXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 253 --RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 116/289 (40%), Gaps = 58/289 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 248 RLIGYCATPTERLLV-YPYMSNGSVASRLREKP-------------ALDWNTRKRI---A 290
L+G C P L+V + G++++ LR K D+ T + + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VR 349
A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 350 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXX 409
+ +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC---------- 252
Query: 410 XXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 253 --RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVHRN-------LLR---LIGYCA----- 254
+G G FG V++GK G +AVK + R +LR ++G+ A
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 72
Query: 255 --TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH-----EQCDPK 307
T T+ LV Y +GS+ L + + ++A+ A GL +LH Q P
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 131
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVG---HIAPEYLSTG- 363
I HRD+K+ N+L+ + D GLA D + + A VG ++APE L
Sbjct: 132 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 191
Query: 364 -----QSSEKTDVFGFGILLLEL 381
+S ++ D++ G++ E+
Sbjct: 192 NMKHFESFKRADIYAMGLVFWEI 214
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLKDMISLAVHRN-------LLR---LIGYCA----- 254
+G G FG V++GK G +AVK + R +LR ++G+ A
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 69
Query: 255 --TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH-----EQCDPK 307
T T+ LV Y +GS+ L + + ++A+ A GL +LH Q P
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 128
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVG---HIAPEYLSTG- 363
I HRD+K+ N+L+ + D GLA D + + A VG ++APE L
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 188
Query: 364 -----QSSEKTDVFGFGILLLEL 381
+S ++ D++ G++ E+
Sbjct: 189 NMKHFESFKRADIYAMGLVFWEI 211
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 26/203 (12%)
Query: 202 ENFSSKNILGAGGFGNVYKGK-----------------LGDGTVLAVKRLKDMISLAVHR 244
E ++ +LG G FG V K K + + R +++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
N+++L + +V + G + + ++ + RI G+ Y+H+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH- 140
Query: 305 DPKIIHRDVKAANVLLDDF---CEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
I+HRD+K N+LL+ C+ + DFGL+ ++ + + GT +IAPE L
Sbjct: 141 --NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR 196
Query: 362 TGQSSEKTDVFGFGILLLELITG 384
G EK DV+ G++L L++G
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSG 218
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 116/289 (40%), Gaps = 58/289 (20%)
Query: 210 LGAGGFGNVYKG------KLGDGTVLAVKRLKD----------------MISLAVHRNLL 247
LG G FG V + K +AVK LK+ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 248 RLIGYCATPTERLLV-YPYMSNGSVASRLREKP-------------ALDWNTRKRI---A 290
L+G C P L+V + G++++ LR K D+ T + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK-LLDHSDSHVTTAVR 349
A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + D R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 350 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXX 409
+ +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC---------- 261
Query: 410 XXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 262 --RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV--TTAVRGTVGHIAPEYLSTGQS 365
IIHRDVK AN+L+ V DFG+A+ + S + V T AV GT +++PE
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 366 SEKTDVFGFGILLLELITG 384
++DV+ G +L E++TG
Sbjct: 197 DARSDVYSLGCVLYEVLTG 215
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 24/193 (12%)
Query: 210 LGAGGFGNVYKGKL----GDGTVLAVKRLKDMISLAV---------------HRNLLRLI 250
+G G FG+V++G +A+K K+ S +V H ++++LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 251 GYCATPTERLLVYPYMSNGSVASRLR-EKPALDWNTRKRIAIGAARGLLYLHEQCDPKII 309
G T ++ + G + S L+ K +LD + A + L YL + + +
Sbjct: 75 G-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 130
Query: 310 HRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 369
HRD+ A NVL+ +GDFGL++ ++ S + + + + +APE ++ + + +
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS 190
Query: 370 DVFGFGILLLELI 382
DV+ FG+ + E++
Sbjct: 191 DVWMFGVCMWEIL 203
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 165 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 217
Query: 355 IAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSINQ 396
APE + T D++ G ++ EL+TG INQ
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQ 260
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 213 GGFGNVYKGKLGDGTVLAVKRLKD----------MISLAV-----HRNLLRLIGYCATPT 257
G FG VYK + + +VLA ++ D M+ + + H N+++L+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 258 ERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKA 315
++ + + G+V + + E +P T +I + + L L+ D KIIHRD+KA
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPL----TESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 316 ANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE-----KTD 370
N+L + + DFG++ + + GT +APE + S + K D
Sbjct: 137 GNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 196
Query: 371 VFGFGILLLEL 381
V+ GI L+E+
Sbjct: 197 VWSLGITLIEM 207
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 26/203 (12%)
Query: 202 ENFSSKNILGAGGFGNVYKGK-----------------LGDGTVLAVKRLKDMISLAVHR 244
E ++ +LG G FG V K K + + R +++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
N+++L + +V + G + + ++ + RI G+ Y+H+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH- 140
Query: 305 DPKIIHRDVKAANVLLDDF---CEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
I+HRD+K N+LL+ C+ + DFGL+ ++ + + GT +IAPE L
Sbjct: 141 --NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR 196
Query: 362 TGQSSEKTDVFGFGILLLELITG 384
G EK DV+ G++L L++G
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 26/203 (12%)
Query: 202 ENFSSKNILGAGGFGNVYKGK-----------------LGDGTVLAVKRLKDMISLAVHR 244
E ++ +LG G FG V K K + + R +++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
N+++L + +V + G + + ++ + RI G+ Y+H+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH- 140
Query: 305 DPKIIHRDVKAANVLLDDF---CEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
I+HRD+K N+LL+ C+ + DFGL+ ++ + + GT +IAPE L
Sbjct: 141 --NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR 196
Query: 362 TGQSSEKTDVFGFGILLLELITG 384
G EK DV+ G++L L++G
Sbjct: 197 -GTYDEKCDVWSAGVILYILLSG 218
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGXV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV--TTAVRGTVGHIAPEYLSTGQS 365
IIHRDVK AN+++ V DFG+A+ + S + V T AV GT +++PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 366 SEKTDVFGFGILLLELITG 384
++DV+ G +L E++TG
Sbjct: 197 DARSDVYSLGCVLYEVLTG 215
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 200
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 200
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 184
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV--TTAVRGTVGHIAPEYLSTGQS 365
IIHRDVK AN+++ V DFG+A+ + S + V T AV GT +++PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 366 SEKTDVFGFGILLLELITG 384
++DV+ G +L E++TG
Sbjct: 197 DARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV--TTAVRGTVGHIAPEYLSTGQS 365
IIHRDVK AN+++ V DFG+A+ + S + V T AV GT +++PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 366 SEKTDVFGFGILLLELITG 384
++DV+ G +L E++TG
Sbjct: 197 DARSDVYSLGCVLYEVLTG 215
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 42/220 (19%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRL-----------------KD 236
R LQ E++ ++G G FG V + V A+K L +D
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 237 MISLAVHRNLLRLIGYCATPTERLL--VYPYMSNGSVASRLR-----EKPALDWNTRKRI 289
+++ A +++L +CA ++ L V YM G + + + EK A + +
Sbjct: 128 IMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVL 185
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS-HVTTAV 348
A+ A + +IHRDVK N+LLD + DFG +D + H TAV
Sbjct: 186 ALDAIHSM---------GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV 236
Query: 349 RGTVGHIAPEYLST----GQSSEKTDVFGFGILLLELITG 384
GT +I+PE L + G + D + G+ L E++ G
Sbjct: 237 -GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 185
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 233
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 148 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 200
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 184
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 195
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 33/210 (15%)
Query: 210 LGAGGFGNVYKG--KLGDGTV-LAVKRLK---------DMISLA--VHR----NLLRLIG 251
LG G FG+V +G ++ + +A+K LK +M+ A +H+ ++RLIG
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 252 YCATPTERLLVYPYMSNGSVASRLR--EKPALDWNTRKRIAIGAARGLLYLHEQCDPKII 309
C E L++ M+ G + ++ + + + + G+ YL E+ +
Sbjct: 404 VCQA--EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFV 458
Query: 310 HRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT--TAVRGTVGHIAPEYLSTGQSSE 367
HR++ A NVLL + A + DFGL+K L DS+ T +A + + APE ++ + S
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 368 KTDVFGFGILLLELITGMRALEFGKSINQK 397
++DV+ +G+ + E AL +G+ +K
Sbjct: 519 RSDVWSYGVTMWE------ALSYGQKPYKK 542
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 193
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 135 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 187
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 235
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV--TTAVRGTVGHIAPEYLSTGQS 365
IIHRDVK AN+++ V DFG+A+ + S + V T AV GT +++PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 366 SEKTDVFGFGILLLELITG 384
++DV+ G +L E++TG
Sbjct: 197 DARSDVYSLGCVLYEVLTG 215
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 138 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 190
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 190
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 133 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 185
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 233
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 134 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 186
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 234
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 194
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 199
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 247
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 207
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 255
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 208
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 146 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 198
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 246
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 155 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 207
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 255
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 208
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 193
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 211
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 259
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 184
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 190
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 194
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 24/205 (11%)
Query: 199 QATENFSSKNILGAGGFGNVYKGKLGD-GTVLAVKRLKD----------------MISLA 241
Q+ E + + ++G G +G V K + D G ++A+K+ + ++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 242 VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKP-ALDWNTRKRIAIGAARGLLYL 300
H NL+ L+ C LV+ ++ + ++ L P LD+ ++ G+ +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
H IIHRD+K N+L+ + DFG A+ L + V T + APE L
Sbjct: 141 HSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYRAPELL 196
Query: 361 -STGQSSEKTDVFGFGILLLELITG 384
+ + DV+ G L+ E+ G
Sbjct: 197 VGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D +T V T +
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 194
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV--TTAVRGTVGHIAPEYLSTGQS 365
IIHRDVK AN+++ V DFG+A+ + S + V T AV GT +++PE
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 366 SEKTDVFGFGILLLELITG 384
++DV+ G +L E++TG
Sbjct: 214 DARSDVYSLGCVLYEVLTG 232
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 210 LGAGGFGNVYKG-KLGDGTVLAVKRL-------KDMI--SLAVHR-----NLLRLIGYCA 254
+G G G VY + G +A++++ K++I + V R N++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 255 TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
E +V Y++ GS+ + E +D + + L +LH ++IHRD+K
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIK 143
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+ N+LL + DFG + S +T V GT +APE ++ K D++
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 375 GILLLELITG 384
GI+ +E+I G
Sbjct: 203 GIMAIEMIEG 212
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 105/256 (41%), Gaps = 70/256 (27%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKR-------------LKDMISLAV--HRNL 246
+F LG GGFG V++ K D A+KR ++++ +LA H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 247 LRLIGYC--ATPTERLL-----VYPYMSNGSVASRLREKPALDW-------NTRKR---- 288
+R TE+L VY Y+ R++ DW R+R
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQ----MQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 289 -IAIGAARGLLYLHEQCDPKIIHRDVKAANVL--LDDFCEAIVGDFGLAKLLDHSDSHVT 345
I + A + +LH + ++HRD+K +N+ +DD + VGDFGL +D + T
Sbjct: 122 HIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK--VGDFGLVTAMDQDEEEQT 176
Query: 346 -----------TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLEL------------- 381
T GT +++PE + S K D+F G++L EL
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRT 236
Query: 382 ITGMRALEFGKSINQK 397
+T +R L+F QK
Sbjct: 237 LTDVRNLKFPPLFTQK 252
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + D+GLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRL--------KDMISLAVHRNLL------ 247
+F ++G G FG V + + AVK L K+ + RN+L
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 248 -RLIGY---CATPTERLLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHE 302
L+G T + V Y++ G + L RE+ L+ R A A L YLH
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRAR-FYAAEIASALGYLHS 157
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL-LDHSDSHVTTAVRGTVGHIAPEYLS 361
I++RD+K N+LLD ++ DFGL K ++H+ + T+ GT ++APE L
Sbjct: 158 L---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPEYLAPEVLH 212
Query: 362 TGQSSEKTDVFGFGILLLELITGM 385
D + G +L E++ G+
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGL 236
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAVHRN 245
E + +G G +G VYK + G A+K+++ ++ H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
+++L T +LV+ ++ + L+ T K + G+ Y H D
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---D 118
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL-STGQ 364
+++HRD+K N+L++ E + DFGLA+ T V T+ + AP+ L + +
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 365 SSEKTDVFGFGILLLELITG 384
S D++ G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAVHRN 245
E + +G G +G VYK + G A+K+++ ++ H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
+++L T +LV+ ++ + L+ T K + G+ Y H D
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---D 118
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL-STGQ 364
+++HRD+K N+L++ E + DFGLA+ T V T+ + AP+ L + +
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 365 SSEKTDVFGFGILLLELITG 384
S D++ G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLK-----------------DMISLAVHR 244
NF + +G G F VY+ L DG +A+K+++ D++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLR----EKPALDWNTRKRIAIGAARGLLYL 300
N+++ E +V G ++ ++ +K + T + + L ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVG---HIAP 357
H + +++HRD+K ANV + +GD GL + S TTA VG +++P
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF----SSKTTAAHSLVGTPYYMSP 205
Query: 358 EYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSIN 395
E + + K+D++ G LL E+ +++ +G +N
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEM-AALQSPFYGDKMN 242
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 35/200 (17%)
Query: 210 LGAGGFGNVYKGKLG-DGTVLAVKRL-----KDMISLAVHRNLLRLIGY----------- 252
+G+G +G V G G +A+K+L ++ + +R L RL+ +
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYREL-RLLKHMRHENVIGLLD 91
Query: 253 CATPTERL-------LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
TP E L LV P+M G+ +L + L + + + +GL Y+H
Sbjct: 92 VFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG- 148
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-LSTGQ 364
IIHRD+K N+ +++ CE + DFGLA+ +DS + V T + APE L+ +
Sbjct: 149 --IIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXV-VTRWYRAPEVILNWMR 202
Query: 365 SSEKTDVFGFGILLLELITG 384
++ D++ G ++ E+ITG
Sbjct: 203 YTQTVDIWSVGCIMAEMITG 222
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGDGTVLAVKR-LKDMISLAVHR-NLLR-------LIGYC 253
+F K++LG G G + + D +AVKR L + S A LLR +I Y
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYF 84
Query: 254 ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA-IG---------AARGLLYLHEQ 303
T +R + Y++ A+ L+E + +K A +G GL +LH
Sbjct: 85 CTEKDR--QFQYIAIELCAATLQE-----YVEQKDFAHLGLEPITLLQQTTSGLAHLHSL 137
Query: 304 CDPKIIHRDVKAANVLLD-----DFCEAIVGDFGLAKLL---DHSDSHVTTAVRGTVGHI 355
I+HRD+K N+L+ +A++ DFGL K L HS S + V GT G I
Sbjct: 138 ---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR-RSGVPGTEGWI 193
Query: 356 APEYLSTGQSSEKT---DVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE LS T D+F G + +I+ + FGKS+ ++ +L
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEG-SHPFGKSLQRQANIL 241
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D + V T +
Sbjct: 156 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGXV-ATRWY 208
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAVHRN 245
E + +G G +G VYK + G A+K+++ ++ H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
+++L T +LV+ ++ + L+ T K + G+ Y H D
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---D 118
Query: 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL-STGQ 364
+++HRD+K N+L++ E + DFGLA+ T + T+ + AP+ L + +
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKK 177
Query: 365 SSEKTDVFGFGILLLELITG 384
S D++ G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++L LV + G + ++ + D I G+ YLH+
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHK 164
Query: 303 QCDPKIIHRDVKAANVLLDD---FCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
I+HRD+K N+LL++ + DFGL+ S + GT +IAPE
Sbjct: 165 H---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF--SKDYKLRDRLGTAYYIAPEV 219
Query: 360 LSTGQSSEKTDVFGFGILLLELITG 384
L + +EK DV+ G+++ L+ G
Sbjct: 220 LKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D + V T +
Sbjct: 159 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGYV-ATRWY 211
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 259
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D + V T +
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-ATRWY 184
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D + V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+D + V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 210 LGAGGFGNVYKG-KLGDGTVLAVKRL-------KDMI--SLAVHR-----NLLRLIGYCA 254
+G G G VY + G +A++++ K++I + V R N++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 255 TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
E +V Y++ GS+ + E +D + + L +LH ++IHRD+K
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIK 143
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+ N+LL + DFG + S + V GT +APE ++ K D++
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 375 GILLLELITG 384
GI+ +E+I G
Sbjct: 203 GIMAIEMIEG 212
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 177 DKQEEGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLK 235
D + IS+GN +NF + ++ LG G +G V K + + G ++AVKR++
Sbjct: 32 DLDSKACISIGN-QNFEVK-----ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR 85
Query: 236 DMISLAVHRNLLRLIGYCATPTERLLVYPY----MSNGSV---------------ASRLR 276
++ + LL + + + G V +
Sbjct: 86 ATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVID 145
Query: 277 EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336
+ + + +IA+ + L +LH + +IHRDVK +NVL++ + + DFG++
Sbjct: 146 KGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGY 203
Query: 337 LDHSDSHVTTAVRGTVGHIAPEY----LSTGQSSEKTDVFGFGILLLEL 381
L DS T G ++APE L+ S K+D++ GI ++EL
Sbjct: 204 L--VDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 288 RIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA 347
+I + + L +L E KIIHRD+K +N+LLD + DFG++ L DS T
Sbjct: 129 KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKTR 184
Query: 348 VRGTVGHIAPEYLSTGQSSE----KTDVFGFGILLLELITG 384
G ++APE + S + ++DV+ GI L EL TG
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 29/206 (14%)
Query: 201 TENFSSKNILGAGGFGNVY--KGKLGDGTVLAVK-----------------RLKDMISLA 241
++ + + +LG G FG V K K+ G AVK R ++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 242 VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH 301
H N+++L + LV + G + + + RI G+ Y+H
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH 167
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+ KI+HRD+K N+LL+ + + DFGL+ + S GT +IAPE
Sbjct: 168 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPE 222
Query: 359 YLSTGQSSEKTDVFGFGILLLELITG 384
L G EK DV+ G++L L++G
Sbjct: 223 VLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 29/206 (14%)
Query: 201 TENFSSKNILGAGGFGNVY--KGKLGDGTVLAVK-----------------RLKDMISLA 241
++ + + +LG G FG V K K+ G AVK R ++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 242 VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH 301
H N+++L + LV + G + + + RI G+ Y+H
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH 166
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+ KI+HRD+K N+LL+ + + DFGL+ + S GT +IAPE
Sbjct: 167 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPE 221
Query: 359 YLSTGQSSEKTDVFGFGILLLELITG 384
L G EK DV+ G++L L++G
Sbjct: 222 VLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 210 LGAGGFGNVYKG-KLGDGTVLAVKRL-------KDMI--SLAVHR-----NLLRLIGYCA 254
+G G G VY + G +A++++ K++I + V R N++ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 255 TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
E +V Y++ GS+ + E +D + + L +LH ++IHR++K
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRNIK 144
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+ N+LL + DFG + S +T V GT +APE ++ K D++
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 375 GILLLELITG 384
GI+ +E+I G
Sbjct: 204 GIMAIEMIEG 213
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 29/206 (14%)
Query: 201 TENFSSKNILGAGGFGNVY--KGKLGDGTVLAVK-----------------RLKDMISLA 241
++ + + +LG G FG V K K+ G AVK R ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 242 VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH 301
H N+++L + LV + G + + + RI G+ Y+H
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH 143
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+ KI+HRD+K N+LL+ + + DFGL+ + S GT +IAPE
Sbjct: 144 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPE 198
Query: 359 YLSTGQSSEKTDVFGFGILLLELITG 384
L G EK DV+ G++L L++G
Sbjct: 199 VLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 38/209 (18%)
Query: 202 ENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRLK-----DMISLAVHRNLLRL------ 249
+ + S +G+G +G+V G +A+K+L ++ + +R LL L
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 250 --IGY--CATPTERL-------LVYPYMSNGSVASRLREKPALDWNTRK--RIAIGAARG 296
IG TP L LV P+M + L++ ++++ K + +G
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQ-----TDLQKIMGMEFSEEKIQYLVYQMLKG 156
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y+H ++HRD+K N+ +++ CE + DFGLA+ H+D+ +T V T + A
Sbjct: 157 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV-VTRWYRA 209
Query: 357 PEY-LSTGQSSEKTDVFGFGILLLELITG 384
PE LS ++ D++ G ++ E++TG
Sbjct: 210 PEVILSWMHYNQTVDIWSVGCIMAEMLTG 238
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 29/206 (14%)
Query: 201 TENFSSKNILGAGGFGNVY--KGKLGDGTVLAVK-----------------RLKDMISLA 241
++ + + +LG G FG V K K+ G AVK R ++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 242 VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH 301
H N+++L + LV + G + + + RI G+ Y+H
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH 149
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+ KI+HRD+K N+LL+ + + DFGL+ + S GT +IAPE
Sbjct: 150 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPE 204
Query: 359 YLSTGQSSEKTDVFGFGILLLELITG 384
L G EK DV+ G++L L++G
Sbjct: 205 VLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 210 LGAGGFGNVYKG-KLGDGTVLAVKRL-------KDMI--SLAVHR-----NLLRLIGYCA 254
+G G G VY + G +A++++ K++I + V R N++ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 255 TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
E +V Y++ GS+ + E +D + + L +LH ++IHRD+K
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIK 144
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+ N+LL + DFG + S + V GT +APE ++ K D++
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 375 GILLLELITG 384
GI+ +E+I G
Sbjct: 204 GIMAIEMIEG 213
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +NV +++ CE + DFGLA+ +D +T V T +
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYV-ATRWY 186
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
APE L+ ++ D++ G ++ EL+ G I+Q ++E
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 235
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 210 LGAGGFGNVYKG-KLGDGTVLAVKRL-------KDMI--SLAVHR-----NLLRLIGYCA 254
+G G G VY + G +A++++ K++I + V R N++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 255 TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
E +V Y++ GS+ + E +D + + L +LH ++IHRD+K
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIK 143
Query: 315 AANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+ N+LL + DFG + S + V GT +APE ++ K D++
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 375 GILLLELITG 384
GI+ +E+I G
Sbjct: 203 GIMAIEMIEG 212
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 38/209 (18%)
Query: 202 ENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRLK-----DMISLAVHRNLLRL------ 249
+ + S +G+G +G+V G +A+K+L ++ + +R LL L
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 250 --IGY--CATPTERL-------LVYPYMSNGSVASRLREKPALDWNTRK--RIAIGAARG 296
IG TP L LV P+M L++ L ++ K + +G
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD-----LQKIMGLKFSEEKIQYLVYQMLKG 138
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L Y+H ++HRD+K N+ +++ CE + DFGLA+ H+D+ +T V T + A
Sbjct: 139 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV-VTRWYRA 191
Query: 357 PEY-LSTGQSSEKTDVFGFGILLLELITG 384
PE LS ++ D++ G ++ E++TG
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLTG 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DF LA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVL--LDDFCEAIVGDFGLAKLLDHSDSHVTT 346
I I A + +LH + ++HRD+K +N+ +DD + VGDFGL +D + T
Sbjct: 169 IFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK--VGDFGLVTAMDQDEEEQTV 223
Query: 347 AV--------RGTVG---HIAPEYLSTGQSSEKTDVFGFGILLLEL-------------I 382
G VG +++PE + S K D+F G++L EL I
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRII 283
Query: 383 TGMRALEFGKSINQK 397
T +R L+F QK
Sbjct: 284 TDVRNLKFPLLFTQK 298
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+ +T V T +
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATRWY 195
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 141 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 230
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 132 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 221
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 30/206 (14%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGD-GTVLAVKRLKD----------------MISLAVHR 244
E + +G G +G V+K + D G ++A+K+ + M+ H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
NL+ L+ LV+ Y + + R + + + K I + + + H+
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH- 121
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL----DHSDSHVTTAVRGTVGHIAPEYL 360
IHRDVK N+L+ + DFG A+LL D+ D V T + +PE L
Sbjct: 122 --NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR-----WYRSPELL 174
Query: 361 -STGQSSEKTDVFGFGILLLELITGM 385
Q DV+ G + EL++G+
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSGV 200
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+ +T V T +
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATRWY 195
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 24/210 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNV-YKGKLGDGTVLAVK------------RLKDMISLA 241
++ + + + +G GGF V + G ++A+K R+K I
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 242 V---HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLL 298
H+++ +L T + +V Y G + + + L + + +
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVA 122
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGL-AKLLDHSDSHVTTAVRGTVGHIAP 357
Y+H Q HRD+K N+L D++ + + DFGL AK + D H+ T G++ + AP
Sbjct: 123 YVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAP 178
Query: 358 EYLSTGQS--SEKTDVFGFGILLLELITGM 385
E L G+S + DV+ GILL L+ G
Sbjct: 179 E-LIQGKSYLGSEADVWSMGILLYVLMCGF 207
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ H+ +T V T +
Sbjct: 143 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATRWY 195
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS---HVTTAVRGT 351
RGL Y+H ++IHRD+K +N+L+++ CE +GDFG+A+ L S + + T T
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 352 VGHIAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS 393
+ APE LS + ++ D++ G + E++ R L GK+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFPGKN 268
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 143 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 232
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 202 ENFSSKNILGAGGFGNVYKGK--LGDGTVLAVKRLK---------------DMISLAVHR 244
E + + LG G + VYKGK L D V A+K ++ ++ H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLV-ALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
N++ L T LV+ Y+ ++ + K RGL Y H Q
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ- 119
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE-YLSTG 363
K++HRD+K N+L+++ E + DFGLA+ V T+ + P+ L +
Sbjct: 120 --KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV-VTLWYRPPDILLGST 176
Query: 364 QSSEKTDVFGFGILLLELITGMRALEFGKSINQK 397
S + D++G G + E+ TG R L G ++ ++
Sbjct: 177 DYSTQIDMWGVGCIFYEMATG-RPLFPGSTVEEQ 209
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 125/315 (39%), Gaps = 66/315 (20%)
Query: 186 LGNLRNFTFRELQQATENFS-SKNILGAGGFGNVYKGKLGDGTVLAVKR-LKDMISLAV- 242
+ N+ NF +Q+ +N S+ ILG G G V G +AVKR L D +A+
Sbjct: 3 IANIPNF-----EQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM 57
Query: 243 ----------HRNLLRLIGYCATPTERLLVYPY-MSNGSVASRLREKPALDWNTRKR--- 288
H N++R YC+ T+R L + N ++ + K D N + +
Sbjct: 58 EIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 115
Query: 289 ----IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD-------------DFCEAIVGDF 331
+ A G+ +LH KIIHRD+K N+L+ + ++ DF
Sbjct: 116 NPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 332 GLAKLLDHSDSHVTTAVR---GTVGHIAPEYLSTGQS-------SEKTDVFGFGILLLEL 381
GL K LD S T + GT G APE L + + D+F G + +
Sbjct: 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 382 ITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCT 441
++ + FG +++ ++ E+ +DR + E +
Sbjct: 233 LSKGKH-PFGDKYSRESNIIRGIFSLD-----------EMKCLHDRSLIAEATDLISQMI 280
Query: 442 QYLPVHRPKMSEVVR 456
+ P+ RP +V+R
Sbjct: 281 DHDPLKRPTAMKVLR 295
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + FGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 9/171 (5%)
Query: 230 AVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRI 289
K L+ M L H L+ L + +V + G + L++ T K
Sbjct: 62 VFKELQIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF 120
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVR 349
L YL Q +IIHRD+K N+LLD+ + DF +A +L ++ +TT
Sbjct: 121 ICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITTMA- 175
Query: 350 GTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELITGMRALEFGKSINQK 397
GT ++APE S+ + S D + G+ EL+ G R S + K
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK 226
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + D GLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 115 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 172 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE 226
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 281
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 282 -REMNPNYTEFKFPQI 296
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 27/207 (13%)
Query: 203 NFSSKNILGAGGFGNVYKG-----------KLGDGTVLA-------VKRLKDMISLAVHR 244
N+ LG G FG V K+ + VLA ++R + L H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
++++L + E ++V Y N + + ++ + +R + Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 132
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG- 363
KI+HRD+K N+LLD+ + DFGL+ ++ +D + G+ + APE +S
Sbjct: 133 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKL 188
Query: 364 QSSEKTDVFGFGILLLELITGMRALEF 390
+ + DV+ G++L ++ R L F
Sbjct: 189 YAGPEVDVWSCGVILYVMLC--RRLPF 213
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 27/207 (13%)
Query: 203 NFSSKNILGAGGFGNVYKG-----------KLGDGTVLA-------VKRLKDMISLAVHR 244
N+ LG G FG V K+ + VLA ++R + L H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
++++L + E ++V Y N + + ++ + +R + Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 131
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG- 363
KI+HRD+K N+LLD+ + DFGL+ ++ +D + G+ + APE +S
Sbjct: 132 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKL 187
Query: 364 QSSEKTDVFGFGILLLELITGMRALEF 390
+ + DV+ G++L ++ R L F
Sbjct: 188 YAGPEVDVWSCGVILYVMLC--RRLPF 212
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD--HSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+L++ C+ + DFGLA++ D H + T T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELIT 383
+ APE + + K+ D++ G +L E+++
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + D GLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 27/207 (13%)
Query: 203 NFSSKNILGAGGFGNVYKG-----------KLGDGTVLA-------VKRLKDMISLAVHR 244
N+ LG G FG V K+ + VLA ++R + L H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
++++L + E ++V Y N + + ++ + +R + Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 122
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG- 363
KI+HRD+K N+LLD+ + DFGL+ ++ +D + G+ + APE +S
Sbjct: 123 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKL 178
Query: 364 QSSEKTDVFGFGILLLELITGMRALEF 390
+ + DV+ G++L ++ R L F
Sbjct: 179 YAGPEVDVWSCGVILYVMLC--RRLPF 203
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 117 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 174 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPE 228
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 283
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 284 -REMNPNYTEFKFPQI 298
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 27/207 (13%)
Query: 203 NFSSKNILGAGGFGNVYKG-----------KLGDGTVLA-------VKRLKDMISLAVHR 244
N+ LG G FG V K+ + VLA ++R + L H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
++++L + E ++V Y N + + ++ + +R + Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 126
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG- 363
KI+HRD+K N+LLD+ + DFGL+ ++ +D + G+ + APE +S
Sbjct: 127 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKL 182
Query: 364 QSSEKTDVFGFGILLLELITGMRALEF 390
+ + DV+ G++L ++ R L F
Sbjct: 183 YAGPEVDVWSCGVILYVMLC--RRLPF 207
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 115 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 172 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPE 226
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 281
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 282 -REMNPNYTEFKFPQI 296
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 100 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 157 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE 211
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 266
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 267 -REMNPNYTEFKFPQI 281
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 34/182 (18%)
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-V 348
+ ARG+ +L + K IHRD+ A N+LL + + DFGLA+ + + +V
Sbjct: 205 SFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-------GMRALEFGKSINQKGAML 401
R + +APE + S K+DV+ +G+LL E+ + G++ E S ++G
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGM-- 319
Query: 402 EWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461
R Y EI Q+ L C P RP+ +E+V L GD
Sbjct: 320 -----------------RMRAPEYS---TPEIYQIMLDCWHRDPKERPRFAELVEKL-GD 358
Query: 462 GL 463
L
Sbjct: 359 LL 360
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 119 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 176 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPE 230
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 285
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 286 -REMNPNYTEFKFPQI 300
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 81 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE 192
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 247
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 248 -REMNPNYTEFKFPQI 262
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 85 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 142 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE 196
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 251
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 252 -REMNPNYTEFKFPQI 266
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ E + DFGLA+ H+D +T V T +
Sbjct: 138 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYV-ATRWY 190
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 89 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 146 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE 200
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 255
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 256 -REMNPNYTEFKFPQI 270
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 21/200 (10%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLA------------VHRN---- 245
F +LG G FG V K G A+K LK + +A V +N
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 211
Query: 246 LLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
L + Y +RL V Y + G + L + + + L YLH
Sbjct: 212 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH--S 269
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+ +++RD+K N++LD + DFGL K D GT ++APE L
Sbjct: 270 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDND 328
Query: 365 SSEKTDVFGFGILLLELITG 384
D +G G+++ E++ G
Sbjct: 329 YGRAVDWWGLGVVMYEMMCG 348
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 82 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 139 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE 193
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 248
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 249 -REMNPNYTEFKFPQI 263
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 160 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 217 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPE 271
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 326
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 327 -REMNPNYTEFKFPQI 341
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 81 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE 192
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 247
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 248 -REMNPNYTEFKFPQI 262
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 93 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 150 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE 204
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 259
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 260 -REMNPNYTEFKFPQI 274
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ E + DFGLA+ H+D +T V T +
Sbjct: 142 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYV-ATRWY 194
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 109 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 166 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPE 220
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 275
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 276 -REMNPNYTEFKFPQI 290
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 220 KGKLGDGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVAS------ 273
K +L ++ + R ++ + H N+++L T LV Y S G V
Sbjct: 49 KTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG 108
Query: 274 RLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGL 333
R++EK A + R + A + Y H++ I+HRD+KA N+LLD + DFG
Sbjct: 109 RMKEKEA---RAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGF 159
Query: 334 AKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE--KTDVFGFGILLLELITG 384
+ + + + A G + APE L G+ + + DV+ G++L L++G
Sbjct: 160 SN--EFTFGNKLDAFCGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS---HVTTAVRGT 351
RGL Y+H ++IHRD+K +N+L+++ CE +GDFG+A+ L S + + T T
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 352 VGHIAPE-YLSTGQSSEKTDVFGFGILLLELIT 383
+ APE LS + ++ D++ G + E++
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 225 DGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLL-VYPYMSNGSVASRLREKPALDW 283
D + V+ K + A + L + C RL V Y++ G + ++ + L
Sbjct: 93 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 152
Query: 284 NTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL-LDHSDS 342
+ + + L YLHE+ II+RD+K NVLLD + D+G+ K L D+
Sbjct: 153 EHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 209
Query: 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
T+ GT +IAPE L D + G+L+ E++ G
Sbjct: 210 --TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 21/200 (10%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLA------------VHRN---- 245
F +LG G FG V K G A+K LK + +A V +N
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 208
Query: 246 LLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
L + Y +RL V Y + G + L + + + L YLH
Sbjct: 209 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH--S 266
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+ +++RD+K N++LD + DFGL K D GT ++APE L
Sbjct: 267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDND 325
Query: 365 SSEKTDVFGFGILLLELITG 384
D +G G+++ E++ G
Sbjct: 326 YGRAVDWWGLGVVMYEMMCG 345
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 220 KGKLGDGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVAS------ 273
K +L ++ + R ++ + H N+++L T LV Y S G V
Sbjct: 49 KTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG 108
Query: 274 RLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGL 333
R++EK A + R + A + Y H++ I+HRD+KA N+LLD + DFG
Sbjct: 109 RMKEKEA---RAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGF 159
Query: 334 AKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE--KTDVFGFGILLLELITG 384
+ + T G+ + APE L G+ + + DV+ G++L L++G
Sbjct: 160 SNEFTFGNKLDTFC--GSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 220 KGKLGDGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVAS------ 273
K +L ++ + R ++ + H N+++L T LV Y S G V
Sbjct: 49 KTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG 108
Query: 274 RLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGL 333
R++EK A + R + A + Y H++ I+HRD+KA N+LLD + DFG
Sbjct: 109 RMKEKEA---RAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGF 159
Query: 334 AKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE--KTDVFGFGILLLELITG 384
+ + T G+ + APE L G+ + + DV+ G++L L++G
Sbjct: 160 SNEFTFGNKLDTFC--GSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 220 KGKLGDGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVAS------ 273
K +L ++ + R ++ + H N+++L T LV Y S G V
Sbjct: 49 KTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG 108
Query: 274 RLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGL 333
R++EK A + R + A + Y H++ I+HRD+KA N+LLD + DFG
Sbjct: 109 RMKEKEA---RAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGF 159
Query: 334 AKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE--KTDVFGFGILLLELITG 384
+ + T G+ + APE L G+ + + DV+ G++L L++G
Sbjct: 160 SNEFTFGNKLDTFC--GSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 33/219 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 93 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 150 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE 204
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQ 396
+ + DV+ G +L EL+ G ++Q
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 243
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ CE + D GLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 94 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 151 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPE 205
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 260
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 261 -REMNPNYTEFKFPQI 275
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 81 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPE 192
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 247
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 248 -REMNPNYTEFKFPQI 262
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ E + DFGLA+ H+D +T V T +
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWY 193
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ E + DFGLA+ H+D +T V T +
Sbjct: 141 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWY 193
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 86 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 143 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPE 197
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 252
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 253 -REMNPNYTEFKFPQI 267
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ E + DFGLA+ H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 22/200 (11%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLA----------------VHRN 245
+F +LG G FG V + G A+K L+ + +A
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 246 LLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
L + Y +RL V Y + G + L + + L YLH +
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+++RD+K N++LD + DFGL K SD GT ++APE L
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 365 SSEKTDVFGFGILLLELITG 384
D +G G+++ E++ G
Sbjct: 182 YGRAVDWWGLGVVMYEMMCG 201
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 225 DGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLL-VYPYMSNGSVASRLREKPALDW 283
D + V+ K + A + L + C RL V Y++ G + ++ + L
Sbjct: 50 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 109
Query: 284 NTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL-LDHSDS 342
+ + + L YLHE+ II+RD+K NVLLD + D+G+ K L D+
Sbjct: 110 EHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 166
Query: 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
T+ GT +IAPE L D + G+L+ E++ G
Sbjct: 167 --TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ E + DFGLA+ H+D +T V T +
Sbjct: 147 RGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWY 199
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 247
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 22/200 (11%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLA----------------VHRN 245
+F +LG G FG V + G A+K L+ + +A
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 246 LLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
L + Y +RL V Y + G + L + + L YLH +
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 127
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+++RD+K N++LD + DFGL K SD GT ++APE L
Sbjct: 128 --DVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPEVLEDND 184
Query: 365 SSEKTDVFGFGILLLELITG 384
D +G G+++ E++ G
Sbjct: 185 YGRAVDWWGLGVVMYEMMCG 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 22/200 (11%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLA----------------VHRN 245
+F +LG G FG V + G A+K L+ + +A
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 246 LLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
L + Y +RL V Y + G + L + + L YLH +
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+++RD+K N++LD + DFGL K SD GT ++APE L
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 365 SSEKTDVFGFGILLLELITG 384
D +G G+++ E++ G
Sbjct: 182 YGRAVDWWGLGVVMYEMMCG 201
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 22/200 (11%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLA------------VHRN---- 245
+F +LG G FG V + G A+K L+ + +A V +N
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 246 LLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
L + Y +RL V Y + G + L + + L YLH +
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+++RD+K N++LD + DFGL K SD GT ++APE L
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 365 SSEKTDVFGFGILLLELITG 384
D +G G+++ E++ G
Sbjct: 182 YGRAVDWWGLGVVMYEMMCG 201
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 22/200 (11%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLA----------------VHRN 245
+F +LG G FG V + G A+K L+ + +A
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 246 LLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
L + Y +RL V Y + G + L + + L YLH +
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+++RD+K N++LD + DFGL K SD GT ++APE L
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 365 SSEKTDVFGFGILLLELITG 384
D +G G+++ E++ G
Sbjct: 182 YGRAVDWWGLGVVMYEMMCG 201
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 251 GYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLL--------YLHE 302
G E ++Y YM N S+ LD N I I + ++ Y+H
Sbjct: 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN 169
Query: 303 QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLST 362
+ I HRDVK +N+L+D + DFG ++ + D + + RGT + PE+ S
Sbjct: 170 E--KNICHRDVKPSNILMDKNGRVKLSDFGESEYM--VDKKIKGS-RGTYEFMPPEFFSN 224
Query: 363 GQSSE--KTDVFGFGILL 378
S K D++ GI L
Sbjct: 225 ESSYNGAKVDIWSLGICL 242
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 21/200 (10%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLA------------VHRN---- 245
F +LG G FG V K G A+K LK + +A V +N
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 70
Query: 246 LLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
L + Y +RL V Y + G + L + + + L YLH +
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 130
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+ +++RD+K N++LD + DFGL K D GT ++APE L
Sbjct: 131 N--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDND 187
Query: 365 SSEKTDVFGFGILLLELITG 384
D +G G+++ E++ G
Sbjct: 188 YGRAVDWWGLGVVMYEMMCG 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 21/200 (10%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLA------------VHRN---- 245
F +LG G FG V K G A+K LK + +A V +N
Sbjct: 9 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 68
Query: 246 LLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
L + Y +RL V Y + G + L + + + L YLH
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH--S 126
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+ +++RD+K N++LD + DFGL K D GT ++APE L
Sbjct: 127 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDND 185
Query: 365 SSEKTDVFGFGILLLELITG 384
D +G G+++ E++ G
Sbjct: 186 YGRAVDWWGLGVVMYEMMCG 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 79/200 (39%), Gaps = 21/200 (10%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLA------------VHRN---- 245
F +LG G FG V K G A+K LK + +A V +N
Sbjct: 10 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 69
Query: 246 LLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
L + Y +RL V Y + G + L + + + L YLH
Sbjct: 70 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH--S 127
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+ +++RD+K N++LD + DFGL K D GT ++APE L
Sbjct: 128 EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDND 186
Query: 365 SSEKTDVFGFGILLLELITG 384
D +G G+++ E++ G
Sbjct: 187 YGRAVDWWGLGVVMYEMMCG 206
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 225 DGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLL-VYPYMSNGSVASRLREKPALDW 283
D + V+ K + A + L + C RL V Y++ G + ++ + L
Sbjct: 46 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 105
Query: 284 NTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL-LDHSDS 342
+ + + L YLHE+ II+RD+K NVLLD + D+G+ K L D+
Sbjct: 106 EHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 162
Query: 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
T+ GT +IAPE L D + G+L+ E++ G
Sbjct: 163 --TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 202
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 225 DGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLL-VYPYMSNGSVASRLREKPALDW 283
D + V+ K + A + L + C RL V Y++ G + ++ + L
Sbjct: 61 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 120
Query: 284 NTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL-LDHSDS 342
+ + + L YLHE+ II+RD+K NVLLD + D+G+ K L D+
Sbjct: 121 EHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT 177
Query: 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
T+ GT +IAPE L D + G+L+ E++ G
Sbjct: 178 --TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 217
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 22/200 (11%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLA----------------VHRN 245
+F +LG G FG V + G A+K L+ + +A
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 246 LLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
L + Y +RL V Y + G + L + + L YLH +
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+++RD+K N++LD + DFGL K SD GT ++APE L
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 365 SSEKTDVFGFGILLLELITG 384
D +G G+++ E++ G
Sbjct: 182 YGRAVDWWGLGVVMYEMMCG 201
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 22/200 (11%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLA------------VHRN---- 245
+F +LG G FG V + G A+K L+ + +A V +N
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 246 LLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
L + Y +RL V Y + G + L + + L YLH +
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 129
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
+++RD+K N++LD + DFGL K SD GT ++APE L
Sbjct: 130 --DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 365 SSEKTDVFGFGILLLELITG 384
D +G G+++ E++ G
Sbjct: 187 YGRAVDWWGLGVVMYEMMCG 206
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 5/158 (3%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
+KR + + H +++ L+ ++ +V+ +M + + ++ + + +A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 291 IGAARGLLYLHEQC-DPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTT 346
R +L C D IIHRDVK NVLL ++ +GDFG+A L S V
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES-GLVAG 191
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT +APE + + DV+G G++L L++G
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 20/150 (13%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVAS------RLREKPALDWNTRKRIAIGAARG 296
H N+++L T L+ Y S G V R++EK A ++ R + A +
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA---RSKFRQIVSAVQ- 128
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
Y H++ +I+HRD+KA N+LLD + DFG + + + A G + A
Sbjct: 129 --YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDAFCGAPPYAA 181
Query: 357 PEYLSTGQSSE--KTDVFGFGILLLELITG 384
PE L G+ + + DV+ G++L L++G
Sbjct: 182 PE-LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 105/242 (43%), Gaps = 40/242 (16%)
Query: 169 SFSLNSSPDKQE-EGLISLGNLR--NFTFRE-LQQATENFSSKNILGAGGFGNVYKGKLG 224
S S SP ++ EG++ L+ ++ +RE + AT LG G FG V++ +
Sbjct: 41 SRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDK 96
Query: 225 D-GTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPY---------------MSN 268
G AVK+++ L V R + CA T +V Y +
Sbjct: 97 QTGFQCAVKKVR----LEVFRA--EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEG 150
Query: 269 GSVASRLREKPALDWNTRKRIAIGAA-RGLLYLHEQCDPKIIHRDVKAANVLLD-DFCEA 326
GS+ ++E+ L R +G A GL YLH + +I+H DVKA NVLL D A
Sbjct: 151 GSLGQLVKEQGCLP-EDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHA 206
Query: 327 IVGDFGLAKLLDH----SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 382
+ DFG A L D + GT H+APE + K DV+ ++L ++
Sbjct: 207 ALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 266
Query: 383 TG 384
G
Sbjct: 267 NG 268
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-LKDMISLAVHRNLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K+ L+D ++R + +C R
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 81 FFY---SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPE 192
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 247
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 248 -REMNPNYTEFKFPQI 262
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 220 KGKLGDGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKP 279
K +L ++ + R ++ + H N+++L T LV Y S G V L
Sbjct: 42 KTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL---V 98
Query: 280 ALDWNTRKRIAIGAARGLLYLHEQCDPK-IIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338
A W K A R ++ + C K I+HRD+KA N+LLD + DFG +
Sbjct: 99 AHGWMKEKE-ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 157
Query: 339 HSDSHVTTAVRGTVGHIAPEYLSTGQSSE--KTDVFGFGILLLELITG 384
+ T G+ + APE L G+ + + DV+ G++L L++G
Sbjct: 158 FGNKLDTFC--GSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 46/139 (33%)
Query: 20 LSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLS 79
LSG + IG++ L + L +N+ISG IP ++G L L LDLS+N+L G IP
Sbjct: 641 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA---- 696
Query: 80 IWLPRKWDKRKCSGVDQGXXXXXXXXXXGAFPVFLAKISELAFLDLSYNNLSGPVPK--- 136
++ ++ L +DLS NNLSGP+P+
Sbjct: 697 ----------------------------------MSALTMLTEIDLSNNNLSGPIPEMGQ 722
Query: 137 ---FPARTFNVAGNPLICG 152
FP F NP +CG
Sbjct: 723 FETFPPAKF--LNNPGLCG 739
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 62/149 (41%), Gaps = 32/149 (21%)
Query: 20 LSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLS 79
L+G + IG L NL + L NN+ SG IP +LG L LDL+ N +G IPA +F
Sbjct: 499 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 558
Query: 80 --------------IWLPRKWDKRKCSGVD-----QGXXXXXXXXXXGAFP------VFL 114
+++ K++C G QG P V+
Sbjct: 559 SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYG 618
Query: 115 AKIS-------ELAFLDLSYNNLSGPVPK 136
S + FLD+SYN LSG +PK
Sbjct: 619 GHTSPTFDNNGSMMFLDMSYNMLSGYIPK 647
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 20 LSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLS 79
LSGT+ S+G+L+ LR + L N + G IP +L + L+TL L N L+G IP+ L
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL--- 483
Query: 80 IWLPRKWDKRKCSGVDQGXXXXXXXXXXGAFPVFLAKISELAFLDLSYNNLSGPVP 135
C+ ++ G P ++ ++ LA L LS N+ SG +P
Sbjct: 484 ---------SNCTNLNW--ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 528
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 5 SPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLS 64
+P+N + L + +G + ++ N + L + L N +SG IP LGSL KL+ L L
Sbjct: 388 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 447
Query: 65 NNRLSGVIPA-LLFLSIWLPRKWDKRKCSGVDQGXXXXXXXXXXGAFPVFLAKISELAFL 123
N L G IP L+++ D + G P L+ + L ++
Sbjct: 448 LNMLEGEIPQELMYVKTLETLILDFNDLT---------------GEIPSGLSNCTNLNWI 492
Query: 124 DLSYNNLSGPVPKFPARTFNVA 145
LS N L+G +PK+ R N+A
Sbjct: 493 SLSNNRLTGEIPKWIGRLENLA 514
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 20 LSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALL 76
L+G + + N TNL + L NN ++G IP +G L L L LSNN SG IPA L
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 6 PENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSN 65
P ++ LG +SG++ +G+L L + L +N + G IP + +L L +DLSN
Sbjct: 653 PYLFILNLG--HNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 710
Query: 66 NRLSGVIPALLFLSIWLPRKW 86
N LSG IP + + P K+
Sbjct: 711 NNLSGPIPEMGQFETFPPAKF 731
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 51/120 (42%), Gaps = 17/120 (14%)
Query: 20 LSGTLSGSIGNLT-NLRQVLLQNNNISGGIPPQLGSLPK--LQTLDLSNNRLSGVIPALL 76
SG L S+ NL+ +L + L +NN SG I P L PK LQ L L NN +G IP L
Sbjct: 352 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 411
Query: 77 FLSIWLPRKWDKRKCSGVDQGXXXXXXXXXXGAFPVFLAKISELAFLDLSYNNLSGPVPK 136
CS + G P L +S+L L L N L G +P+
Sbjct: 412 ------------SNCS--ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 53/142 (37%), Gaps = 40/142 (28%)
Query: 20 LSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLS 79
LSG S +I T L+ + + +N G IPP L LQ L L+ N+ +G IP L
Sbjct: 232 LSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFL--- 286
Query: 80 IWLPRKWDKRKCSGVDQGXXXXXXXXXXGAFPVF-------------------------L 114
+G+D GA P F L
Sbjct: 287 -----SGACDTLTGLD-----LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTL 336
Query: 115 AKISELAFLDLSYNNLSGPVPK 136
K+ L LDLS+N SG +P+
Sbjct: 337 LKMRGLKVLDLSFNEFSGELPE 358
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 39/111 (35%)
Query: 32 TNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRKC 91
NL + + +NN S GIP LG LQ LD+S N+LS
Sbjct: 197 VNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLS---------------------- 233
Query: 92 SGVDQGXXXXXXXXXXGAFPVFLAKISELAFLDLSYNNLSGPVPKFPARTF 142
G F ++ +EL L++S N GP+P P ++
Sbjct: 234 ----------------GDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSL 268
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 28 IGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSI-WLPRKW 86
+G+ + L+ + + N +SG + + +L+ L++S+N+ G IP L S+ +L
Sbjct: 216 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 275
Query: 87 DKRKCSGVDQGXXXXXXXXXXGAFPVFLAKISE-LAFLDLSYNNLSGPVPKF 137
+K G P FL+ + L LDLS N+ G VP F
Sbjct: 276 NK-----------------FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF 310
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 17/112 (15%)
Query: 24 LSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLP 83
LSG+ LT L L N+ G +PP GS L++L LS+N SG +P L +
Sbjct: 286 LSGACDTLTGLD---LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL 342
Query: 84 RKWDKRKCSGVDQGXXXXXXXXXXGAFPVFLAKIS-ELAFLDLSYNNLSGPV 134
+ D G P L +S L LDLS NN SGP+
Sbjct: 343 KVLD-------------LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 381
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 29/206 (14%)
Query: 201 TENFSSKNILGAGGFGNVY--KGKLGDGTVLAVK-----------------RLKDMISLA 241
++ + + +LG G FG V K K+ G AVK R ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 242 VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH 301
H N+ +L + LV + G + + + RI G+ Y H
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXH 143
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+ KI+HRD+K N+LL+ + + DFGL+ + S GT +IAPE
Sbjct: 144 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI--GTAYYIAPE 198
Query: 359 YLSTGQSSEKTDVFGFGILLLELITG 384
L G EK DV+ G++L L++G
Sbjct: 199 VLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 41/228 (17%)
Query: 207 KNILGAGGFGNVYKGK-LGDGTVLAVKRLKD---------------MISLAVHRNLLRLI 250
+ +L GGF VY+ + +G G A+KRL M L+ H N+++
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92
Query: 251 GYCATPTER-------LLVYPYMSNGSVASRLRE---KPALDWNTRKRIAIGAARGLLYL 300
+ E L+ + G + L++ + L +T +I R + ++
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVR----------- 349
H Q P IIHRD+K N+LL + + DFG A + H + +A R
Sbjct: 153 HRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 350 GTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITGMRALEFGKSI 394
T + PE + S EK D++ G +L L E G +
Sbjct: 212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 46/139 (33%)
Query: 20 LSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLS 79
LSG + IG++ L + L +N+ISG IP ++G L L LDLS+N+L G IP
Sbjct: 644 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA---- 699
Query: 80 IWLPRKWDKRKCSGVDQGXXXXXXXXXXGAFPVFLAKISELAFLDLSYNNLSGPVPK--- 136
++ ++ L +DLS NNLSGP+P+
Sbjct: 700 ----------------------------------MSALTMLTEIDLSNNNLSGPIPEMGQ 725
Query: 137 ---FPARTFNVAGNPLICG 152
FP F NP +CG
Sbjct: 726 FETFPPAKF--LNNPGLCG 742
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 62/149 (41%), Gaps = 32/149 (21%)
Query: 20 LSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLS 79
L+G + IG L NL + L NN+ SG IP +LG L LDL+ N +G IPA +F
Sbjct: 502 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 561
Query: 80 --------------IWLPRKWDKRKCSGVD-----QGXXXXXXXXXXGAFP------VFL 114
+++ K++C G QG P V+
Sbjct: 562 SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYG 621
Query: 115 AKIS-------ELAFLDLSYNNLSGPVPK 136
S + FLD+SYN LSG +PK
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPK 650
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 20 LSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLS 79
LSGT+ S+G+L+ LR + L N + G IP +L + L+TL L N L+G IP+ L
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL--- 486
Query: 80 IWLPRKWDKRKCSGVDQGXXXXXXXXXXGAFPVFLAKISELAFLDLSYNNLSGPVP 135
C+ ++ G P ++ ++ LA L LS N+ SG +P
Sbjct: 487 ---------SNCTNLNW--ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 20 LSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALL 76
L+G + + N TNL + L NN ++G IP +G L L L LSNN SG IPA L
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 5 SPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLS 64
+P+N + L + +G + ++ N + L + L N +SG IP LGSL KL+ L L
Sbjct: 391 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 450
Query: 65 NNRLSGVIP-ALLFLSIWLPRKWDKRKCSGVDQGXXXXXXXXXXGAFPVFLAKISELAFL 123
N L G IP L+++ D + G P L+ + L ++
Sbjct: 451 LNMLEGEIPQELMYVKTLETLILDFNDLT---------------GEIPSGLSNCTNLNWI 495
Query: 124 DLSYNNLSGPVPKFPARTFNVA 145
LS N L+G +PK+ R N+A
Sbjct: 496 SLSNNRLTGEIPKWIGRLENLA 517
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 6 PENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSN 65
P ++ LG +SG++ +G+L L + L +N + G IP + +L L +DLSN
Sbjct: 656 PYLFILNLG--HNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713
Query: 66 NRLSGVIPALLFLSIWLPRKW 86
N LSG IP + + P K+
Sbjct: 714 NNLSGPIPEMGQFETFPPAKF 734
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 51/120 (42%), Gaps = 17/120 (14%)
Query: 20 LSGTLSGSIGNLT-NLRQVLLQNNNISGGIPPQLGSLPK--LQTLDLSNNRLSGVIPALL 76
SG L S+ NL+ +L + L +NN SG I P L PK LQ L L NN +G IP L
Sbjct: 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414
Query: 77 FLSIWLPRKWDKRKCSGVDQGXXXXXXXXXXGAFPVFLAKISELAFLDLSYNNLSGPVPK 136
CS + G P L +S+L L L N L G +P+
Sbjct: 415 ------------SNCS--ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 39/111 (35%)
Query: 32 TNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRKC 91
NL + + +NN S GIP LG LQ LD+S N+LS
Sbjct: 200 VNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLS---------------------- 236
Query: 92 SGVDQGXXXXXXXXXXGAFPVFLAKISELAFLDLSYNNLSGPVPKFPARTF 142
G F ++ +EL L++S N GP+P P ++
Sbjct: 237 ----------------GDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSL 271
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 53/142 (37%), Gaps = 40/142 (28%)
Query: 20 LSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLS 79
LSG S +I T L+ + + +N G IPP L LQ L L+ N+ +G IP L
Sbjct: 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFL--- 289
Query: 80 IWLPRKWDKRKCSGVDQGXXXXXXXXXXGAFPVF-------------------------L 114
+G+D GA P F L
Sbjct: 290 -----SGACDTLTGLD-----LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTL 339
Query: 115 AKISELAFLDLSYNNLSGPVPK 136
K+ L LDLS+N SG +P+
Sbjct: 340 LKMRGLKVLDLSFNEFSGELPE 361
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 28 IGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSI-WLPRKW 86
+G+ + L+ + + N +SG + + +L+ L++S+N+ G IP L S+ +L
Sbjct: 219 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 278
Query: 87 DKRKCSGVDQGXXXXXXXXXXGAFPVFLAKISE-LAFLDLSYNNLSGPVPKF 137
+K G P FL+ + L LDLS N+ G VP F
Sbjct: 279 NK-----------------FTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF 313
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 17/112 (15%)
Query: 24 LSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLP 83
LSG+ LT L L N+ G +PP GS L++L LS+N SG +P L +
Sbjct: 289 LSGACDTLTGLD---LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL 345
Query: 84 RKWDKRKCSGVDQGXXXXXXXXXXGAFPVFLAKIS-ELAFLDLSYNNLSGPV 134
+ D G P L +S L LDLS NN SGP+
Sbjct: 346 KVLD-------------LSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 237 MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
++ L H N+++L + LV G + + + + I G
Sbjct: 89 VLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSG 148
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLD----DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ YLH+ I+HRD+K N+LL+ D IV DFGL+ + ++ GT
Sbjct: 149 VTYLHKH---NIVHRDLKPENLLLESKEKDALIKIV-DFGLSAVFENQKK--MKERLGTA 202
Query: 353 GHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+IAPE L + EK DV+ G++L L+ G
Sbjct: 203 YYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 220 KGKLGDGTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVAS------ 273
K +L ++ + R ++ + H N+++L T LV Y S G V
Sbjct: 49 KTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG 108
Query: 274 RLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGL 333
R++EK A + R + A + Y H++ I+HRD+KA N+LLD + DFG
Sbjct: 109 RMKEKEA---RAKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGF 159
Query: 334 AKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE--KTDVFGFGILLLELITG 384
+ + + + G+ + APE L G+ + + DV+ G++L L++G
Sbjct: 160 SN--EFTFGNKLDEFCGSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 37/207 (17%)
Query: 203 NFSSKNILGAGGFGNVYKGK-LGDGTVLAVK----------------RLKDMISLAVHRN 245
N+ + +G G F V + + G +AVK R ++ + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVAS------RLREKPALDWNTRKRIAIGAARGLLY 299
+++L T LV Y S G V R++EK A + R + A + Y
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA---RAKFRQIVSAVQ---Y 129
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H++ I+HRD+KA N+LLD + DFG + + T G+ + APE
Sbjct: 130 CHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC--GSPPYAAPE- 183
Query: 360 LSTGQSSE--KTDVFGFGILLLELITG 384
L G+ + + DV+ G++L L++G
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 107/242 (44%), Gaps = 40/242 (16%)
Query: 169 SFSLNSSPDKQE-EGLISLGNLR--NFTFRE-LQQATENFSSKNILGAGGFGNVYKGKLG 224
S S SP ++ EG++ L+ ++ +RE + AT LG G FG V++ +
Sbjct: 60 SRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDK 115
Query: 225 D-GTVLAVKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPY---------------MSN 268
G AVK+++ L V R + CA T +V Y +
Sbjct: 116 QTGFQCAVKKVR----LEVFRA--EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEG 169
Query: 269 GSVASRLREKPALDWNTRKRIAIGAA-RGLLYLHEQCDPKIIHRDVKAANVLLD-DFCEA 326
GS+ ++E+ L R +G A GL YLH + +I+H DVKA NVLL D A
Sbjct: 170 GSLGQLVKEQGCLP-EDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHA 225
Query: 327 IVGDFGLAKLL--DHSDSHVTTA--VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 382
+ DFG A L D + T + GT H+APE + K DV+ ++L ++
Sbjct: 226 ALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 285
Query: 383 TG 384
G
Sbjct: 286 NG 287
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 20/150 (13%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVAS------RLREKPALDWNTRKRIAIGAARG 296
H N+++L T L+ Y S G V R++EK A ++ R + A +
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA---RSKFRQIVSAVQ- 125
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
Y H++ +I+HRD+KA N+LLD + DFG + T G+ + A
Sbjct: 126 --YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC--GSPPYAA 178
Query: 357 PEYLSTGQSSE--KTDVFGFGILLLELITG 384
PE L G+ + + DV+ G++L L++G
Sbjct: 179 PE-LFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +N+ +++ E + DFGL + H+D +T V T +
Sbjct: 136 RGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMTGYV-ATRWY 188
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 401
APE L+ ++ D++ G ++ EL+TG I+Q +L
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 122/311 (39%), Gaps = 62/311 (19%)
Query: 186 LGNLRNFTFRELQQATENFS-SKNILGAGGFGNVYKGKLGDGTVLAVKR-LKDMISLAV- 242
+ N+ NF +Q+ +N S+ ILG G G V G +AVKR L D +A+
Sbjct: 21 IANIPNF-----EQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM 75
Query: 243 ----------HRNLLRLIGYCATPTERLLVYPY-MSNGSVASRLREKPALDWNTRKR--- 288
H N++R YC+ T+R L + N ++ + K D N + +
Sbjct: 76 EIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 133
Query: 289 ----IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD-------------DFCEAIVGDF 331
+ A G+ +LH KIIHRD+K N+L+ + ++ DF
Sbjct: 134 NPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 332 GLAKLLDHSDSHVTTAVR---GTVGHIAPEYLSTGQSSEKT---DVFGFGILLLELITGM 385
GL K LD + GT G APE L T D+F G + +++
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 386 RALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLP 445
+ FG +++ ++ E+ +DR + E + + P
Sbjct: 251 KH-PFGDKYSRESNIIRGIFSLD-----------EMKCLHDRSLIAEATDLISQMIDHDP 298
Query: 446 VHRPKMSEVVR 456
+ RP +V+R
Sbjct: 299 LKRPTAMKVLR 309
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N+++L LV ++ G + R+++K I + ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMH- 123
Query: 303 QCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
D ++HRD+K N+L +D E + DFG A+L + + T T+ + APE
Sbjct: 124 --DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPEL 180
Query: 360 LSTGQSSEKTDVFGFGILLLELITG 384
L+ E D++ G++L +++G
Sbjct: 181 LNQNGYDESCDLWSLGVILYTMLSG 205
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 122/311 (39%), Gaps = 62/311 (19%)
Query: 186 LGNLRNFTFRELQQATENFS-SKNILGAGGFGNVYKGKLGDGTVLAVKR-LKDMISLAV- 242
+ N+ NF +Q+ +N S+ ILG G G V G +AVKR L D +A+
Sbjct: 21 IANIPNF-----EQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM 75
Query: 243 ----------HRNLLRLIGYCATPTERLLVYPY-MSNGSVASRLREKPALDWNTRKR--- 288
H N++R YC+ T+R L + N ++ + K D N + +
Sbjct: 76 EIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 133
Query: 289 ----IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD-------------DFCEAIVGDF 331
+ A G+ +LH KIIHRD+K N+L+ + ++ DF
Sbjct: 134 NPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 332 GLAKLLDHSDSHVTTAVR---GTVGHIAPEYLSTGQSSEKT---DVFGFGILLLELITGM 385
GL K LD + GT G APE L T D+F G + +++
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 386 RALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLP 445
+ FG +++ ++ E+ +DR + E + + P
Sbjct: 251 KH-PFGDKYSRESNIIRGIFSLD-----------EMKCLHDRSLIAEATDLISQMIDHDP 298
Query: 446 VHRPKMSEVVR 456
+ RP +V+R
Sbjct: 299 LKRPTAMKVLR 309
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 210 LGAGGFGNVYKGK------LGDGTVLAVK---RLKDMI------SLAVHRNLLRLIGYCA 254
LG G FG VYK K L V+ K L+D I + H +++L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 255 TPTERLLVYPYMSNGSVASRLRE------KPALDWNTRKRIAIGAARGLLYLHEQCDPKI 308
+ ++ + G+V + + E +P + R+ + L +LH + +I
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---RI 130
Query: 309 IHRDVKAANVLLDDFCEAIVGDFGLA----KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
IHRD+KA NVL+ + + DFG++ K L DS + T + E +
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 365 SSEKTDVFGFGILLLEL 381
K D++ GI L+E+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 261 LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL 320
+V YM +A+ L + P L+ + R RGL Y+H ++HRD+K AN+ +
Sbjct: 99 IVQEYMET-DLANVLEQGPLLEEHAR-LFMYQLLRGLKYIHSA---NVLHRDLKPANLFI 153
Query: 321 --DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVG--HIAPE-YLSTGQSSEKTDVFGFG 375
+D I GDFGLA+++D SH G V + +P LS ++ D++ G
Sbjct: 154 NTEDLVLKI-GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAG 212
Query: 376 ILLLELITGMRALEFGKSINQKGAMLE 402
+ E++TG + Q +LE
Sbjct: 213 CIFAEMLTGKTLFAGAHELEQMQLILE 239
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 51/266 (19%)
Query: 173 NSSPDKQEEGLIS-LGNLRNFT--FRELQQATENFSSKNILGAGGFGNVYKGKLGDG-TV 228
N+SP ++E+ ++ L + FT ++++ E+F ++G G FG V KL + V
Sbjct: 42 NNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKV 101
Query: 229 LAVKRLK--DMISLAV------HRNLL--------RLIGYCATPTERL-LVYPYMSNGSV 271
A+K L +M+ A R++L + Y L LV Y G +
Sbjct: 102 FAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDL 161
Query: 272 AS-------RLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC 324
+ RL E+ A + IAI + L Y +HRD+K N+L+D
Sbjct: 162 LTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY---------VHRDIKPDNILMDMNG 212
Query: 325 EAIVGDFG-LAKLLDHSDSHVTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILL 378
+ DFG KL++ + AV GT +I+PE L G+ + D + G+ +
Sbjct: 213 HIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCM 271
Query: 379 LELITGMRAL-------EFGKSINQK 397
E++ G +GK +N K
Sbjct: 272 YEMLYGETPFYAESLVETYGKIMNHK 297
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 210 LGAGGFGNVYKGK------LGDGTVLAVK---RLKDMI------SLAVHRNLLRLIGYCA 254
LG G FG VYK K L V+ K L+D I + H +++L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 255 TPTERLLVYPYMSNGSVASRLRE------KPALDWNTRKRIAIGAARGLLYLHEQCDPKI 308
+ ++ + G+V + + E +P + R+ + L +LH + +I
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---RI 138
Query: 309 IHRDVKAANVLLDDFCEAIVGDFGLA----KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
IHRD+KA NVL+ + + DFG++ K L DS + T + E +
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 365 SSEKTDVFGFGILLLEL 381
K D++ GI L+E+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKR-----------LKDMISLAVHRNLLRLI 250
+++ ++G G FG VY+ KL D G ++A+K+ L+ M L H N++RL
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD-HCNIVRLR 79
Query: 251 GYCATPTER--------LLVYPYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLH 301
+ + E+ +L Y + VA R K L K R L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 302 EQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
I HRD+K N+LLD D + DFG AK L + +V+ + + APE +
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELI 194
Query: 361 -STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQ 396
+ DV+ G +L EL+ G ++Q
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 20/150 (13%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVAS------RLREKPALDWNTRKRIAIGAARG 296
H N+++L T LV Y S G V R +EK A + R + A +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA---RAKFRQIVSAVQ- 127
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
Y H++ I+HRD+KA N+LLD + DFG + + + + A G + A
Sbjct: 128 --YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSN--EFTFGNKLDAFCGAPPYAA 180
Query: 357 PEYLSTGQSSE--KTDVFGFGILLLELITG 384
PE L G+ + + DV+ G++L L++G
Sbjct: 181 PE-LFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 87/229 (37%), Gaps = 28/229 (12%)
Query: 182 GLISLGNLRNFTFRELQQATENFSSKNILGAGGFGN----VYKGKLGDGTVLAVKRLKD- 236
GL+ G+ N F ++ + K +G G + V+K + V + + K
Sbjct: 13 GLVPRGSHMNLVF------SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRD 66
Query: 237 -------MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRI 289
++ H N++ L LV M G + ++ + +
Sbjct: 67 PSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFV 126
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDF-----CEAIVGDFGLAKLLDHSDSHV 344
+ + YLH Q ++HRD+K +N+L D C I DFG AK L + +
Sbjct: 127 LHTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRIC-DFGFAKQLRAENGLL 182
Query: 345 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS 393
T T +APE L E D++ GILL ++ G G S
Sbjct: 183 MTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS 230
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 103/256 (40%), Gaps = 39/256 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKRLKDMISLAVHR-NLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K++ + ++R + +C R
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 81 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPE 192
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXX 417
+ + DV+ G +L EL+ G ++Q +++
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 247
Query: 418 DRELGSNYDRIEVGEI 433
RE+ NY + +I
Sbjct: 248 -REMNPNYTEFKFPQI 262
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 33/219 (15%)
Query: 203 NFSSKNILGAGGFGNVYKGKLGD-GTVLAVKRLKDMISLAVHR-NLLRLIGYCATPTERL 260
+++ ++G G FG VY+ KL D G ++A+K++ + ++R + +C R
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 261 LVYPYMSNGSVASRLREKPALDW--NTRKRIAIGAARG-------------------LLY 299
Y S+G + LD+ T R+A +R L Y
Sbjct: 81 FFY---SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 300 LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+H I HRD+K N+LLD D + DFG AK L + +V+ + + APE
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPE 192
Query: 359 YL-STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQ 396
+ + DV+ G +L EL+ G ++Q
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 178
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 155
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 212
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 255
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 220
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 206
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 192
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 199 QATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLA 241
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 242 VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLL 298
H N+++L+ T + LV+ ++ + + AL K +GL
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+ H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 125 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPE 180
Query: 359 Y-LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 219
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 206
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEI 175
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 213
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +NV +++ E + DFGLA+ +D +T V T +
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYV-ATRWY 194
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
APE L+ ++ D++ G ++ EL+ G I+Q ++E
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 243
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 205
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 206
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
RGL Y+H IIHRD+K +NV +++ E + DFGLA+ +D +T V T +
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYV-ATRWY 194
Query: 355 IAPE-YLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
APE L+ ++ D++ G ++ EL+ G I+Q ++E
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 206
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 207 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 205
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+K+++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLYLH 301
N+++L+ T + LV+ ++ + + AL K +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-L 360
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
S D++ G + E++T RAL G S I+Q
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 211
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 193
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 192
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 205
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+K+++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLYLH 301
N+++L+ T + LV+ ++ + + AL K +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-L 360
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
S D++ G + E++T RAL G S I+Q
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 205
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 206 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 193
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 193
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+K+++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLYLH 301
N+++L+ T + LV+ ++ + + AL K +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-L 360
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
S D++ G + E++T RAL G S I+Q
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+K+++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLYLH 301
N+++L+ T + LV+ ++ + + AL K +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-L 360
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
S D++ G + E++T RAL G S I+Q
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 199 QATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLA 241
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 242 VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLL 298
H N+++L+ T + LV+ ++ + + AL K +GL
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+ H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 125 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPE 180
Query: 359 Y-LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 219
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+K+++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLYLH 301
N+++L+ T + LV+ ++ + + AL K +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-L 360
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
S D++ G + E++T RAL G S I+Q
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 211
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS---DSHVTTAVRGTVGHIAPEY----- 359
+IHRD+K +N+L++ C+ V DFGLA+++D S +S T G V +A +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 360 --LSTGQSSEKTDVFGFGILLLELI 382
L++ + S DV+ G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 220
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 168
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 169 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 225
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 226 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 268
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+K+++ ++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLYLH 301
N+++L+ T + LV+ ++ + + AL K +GL + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-L 360
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 180
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
S D++ G + E++T RAL G S I+Q
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 216
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 177
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 123/315 (39%), Gaps = 66/315 (20%)
Query: 186 LGNLRNFTFRELQQATENFS-SKNILGAGGFGNVYKGKLGDGTVLAVKR-LKDMISLAV- 242
+ N+ NF +Q+ +N S+ ILG G G V G +AVKR L D +A+
Sbjct: 3 IANIPNF-----EQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM 57
Query: 243 ----------HRNLLRLIGYCATPTERLLVYPY-MSNGSVASRLREKPALDWNTRKR--- 288
H N++R YC+ T+R L + N ++ + K D N + +
Sbjct: 58 EIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 115
Query: 289 ----IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD-------------DFCEAIVGDF 331
+ A G+ +LH KIIHRD+K N+L+ + ++ DF
Sbjct: 116 NPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 332 GLAKLLDHSDSHVTTAVR---GTVGHIAPEYLSTGQS-------SEKTDVFGFGILLLEL 381
GL K LD + GT G APE L + + D+F G + +
Sbjct: 173 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 382 ITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCT 441
++ + FG +++ ++ E+ +DR + E +
Sbjct: 233 LSKGKH-PFGDKYSRESNIIRGIFSLD-----------EMKCLHDRSLIAEATDLISQMI 280
Query: 442 QYLPVHRPKMSEVVR 456
+ P+ RP +V+R
Sbjct: 281 DHDPLKRPTAMKVLR 295
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 32/226 (14%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS------------L 240
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS +
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 241 AV---------HRNLLRLIGYCATPTERLLVYPYMSN-GSVASRLREKPALDWNTRKRIA 290
V ++RL+ + P +L+ M + + E+ AL +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVR 349
+ + H C ++HRD+K N+L+D + E + DFG LL + V T
Sbjct: 121 WQVLEAVRHCH-NC--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFD 174
Query: 350 GTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
GT + PE++ + ++ V+ GILL +++ G E + I
Sbjct: 175 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 178
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 200
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 243
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 181 EGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKLGD-GTVLAVK------- 232
EG++ L+ + E ++ + + LG G FG V++ K G AVK
Sbjct: 52 EGVLLTEKLKPVDY-EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF 110
Query: 233 RLKDMISLA--VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
R++++++ A ++ L G + + GS+ +++ L R
Sbjct: 111 RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP-EDRALYY 169
Query: 291 IGAA-RGLLYLHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLL--DHSDSHVTT 346
+G A GL YLH + +I+H DVKA NVLL D A + DFG A L D + T
Sbjct: 170 LGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 226
Query: 347 A--VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT H+APE + K D++ ++L ++ G
Sbjct: 227 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 46/228 (20%)
Query: 210 LGAGGFGNVYKG-KLGDGTVLAVKRLKD-----------------MISLAVHRNLLRLIG 251
LG G +G V+K G V+AVK++ D + L+ H N++ L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 252 YCATPTER--LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKII 309
+R LV+ YM A + L+ ++ + + + YLH ++
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHA--VIRANILEPVHKQYVVYQLIKVIKYLHSGG---LL 131
Query: 310 HRDVKAANVLLDDFCEAIVGDFGLAKLLDH--------------------SDSHVTTAVR 349
HRD+K +N+LL+ C V DFGL++ + D + T
Sbjct: 132 HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYV 191
Query: 350 GTVGHIAPEY-LSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQ 396
T + APE L + + ++ D++ G +L E++ G ++NQ
Sbjct: 192 ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAV 242
+E + + +LG+GGFG+VY G ++ D +A+K + KD IS + +
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLL 298
LL+ + + RLL + + V R +P D R + AR
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 299 Y-----LHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTV 352
+ + + ++HRD+K N+L+D + E + DFG LL + V T GT
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTR 178
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGMRALEFGKSI 394
+ PE++ + ++ V+ GILL +++ G E + I
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS---DSHVTTAVRGTVGHIAPEY----- 359
+IHRD+K +N+L++ C+ V DFGLA+++D S +S T G ++A +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 360 --LSTGQSSEKTDVFGFGILLLELI 382
L++ + S DV+ G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+K+++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLYLH 301
N+++L+ T + LV+ ++ + + AL K +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-L 360
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
S D++ G + E++T RAL G S I+Q
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 243 HRNLLRLIGYCATPTERLLVYPYMS----NGSVASRLREKPALDWNTRKRIAIGAARGLL 298
H N+++L+ T + LV+ ++S + AS L P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+ H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPE 176
Query: 359 Y-LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 50/212 (23%)
Query: 210 LGAGGFGNVYKG---KLGDGTVL---------------AVKRLKDMISLAVHRNLLRLIG 251
+G G FG V+K K G L A++ +K ++ L H N++ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLIE 84
Query: 252 YC---ATPTER-----LLVYPY--------MSNGSVASRLREKPALDWNTRKRIAIGAAR 295
C A+P R LV+ + +SN V L E KR+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--------KRVMQMLLN 136
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK---LLDHSDSHVTTAVRGTV 352
GL Y+H KI+HRD+KAANVL+ + DFGLA+ L +S + T+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 353 GHIAPE-YLSTGQSSEKTDVFGFGILLLELIT 383
+ PE L D++G G ++ E+ T
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 243 HRNLLRLIGYCATPTERLLVYPYMS----NGSVASRLREKPALDWNTRKRIAIGAARGLL 298
H N+++L+ T + LV+ ++S + AS L P K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPL---PLIKSYLFQLLQGLA 119
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+ H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPE 175
Query: 359 Y-LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 214
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL--DHSDSHVTTAVRGTV 352
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 353 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITG 384
+ APE + + K+ D++ G +L E+++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 27/196 (13%)
Query: 210 LGAGGFGNVYKG-----------------KLGDGTVLAVKRLKDMISLAVHRNLLRLIGY 252
+G G F VYKG KL K + + H N++R
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 253 CATPTE----RLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKI 308
+ + +LV ++G++ + L+ + +GL +LH + P I
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT-PPI 152
Query: 309 IHRDVKAANVLLDDFCEAI-VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IHRD+K N+ + ++ +GD GLA L S AV GT APE + E
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---FAKAVIGTPEFXAPEXYEE-KYDE 208
Query: 368 KTDVFGFGILLLELIT 383
DV+ FG LE T
Sbjct: 209 SVDVYAFGXCXLEXAT 224
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS---DSHVT------TAVRGTVGHIAPE 358
+IHRD+K +N+L++ C+ V DFGLA+++D S +S T T T + APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 359 -YLSTGQSSEKTDVFGFGILLLELI 382
L++ + S DV+ G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 29/204 (14%)
Query: 204 FSSKNILGAGGFGNVY-------------KGKLGDGTVLAVKRLKDMISLAV---HRNLL 247
F K LG+G FG+V+ K D + + +++++ I + H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLREK----PALDWNTRKRIAIGAARGLLYLHEQ 303
++ +V G + R+ AL + L Y H Q
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 304 CDPKIIHRDVKAANVLLDD---FCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
++H+D+K N+L D + DFGLA+L SD H T A GT ++APE
Sbjct: 144 ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK-SDEHSTNAA-GTALYMAPEVF 198
Query: 361 STGQSSEKTDVFGFGILLLELITG 384
+ K D++ G+++ L+TG
Sbjct: 199 KRDVTF-KCDIWSAGVVMYFLLTG 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++S + + AL K +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 122 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 177
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 209 ILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAVHRNLLRLIGYCATP 256
+LG+GGFG+VY G ++ D +A+K + KD IS + + LL+ + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 257 TERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLLY-----LHEQCDPK 307
RLL + + V R +P D R + AR + + +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXG 130
Query: 308 IIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSS 366
++HRD+K N+L+D + E + DFG LL + V T GT + PE++ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 187
Query: 367 EKT-DVFGFGILLLELITGMRALEFGKSI 394
++ V+ GILL +++ G E + I
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++S + + AL K +GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 175
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 213
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 209 ILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAVHRNLLRLIGYCATP 256
+LG+GGFG+VY G ++ D +A+K + KD IS + + LL+ + +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 257 TERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLLY-----LHEQCDPK 307
RLL + + V R +P D R + AR + + +
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 133
Query: 308 IIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSS 366
++HRD+K N+L+D + E + DFG LL + V T GT + PE++ +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 190
Query: 367 EKT-DVFGFGILLLELITGMRALEFGKSI 394
++ V+ GILL +++ G E + I
Sbjct: 191 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 219
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 25/219 (11%)
Query: 186 LGNLRNFTFRELQQATENFSSKNILGAGGFGNV-----------YKGKLGDGTVLAVKRL 234
+G F + ++N+ K LG G F V + K+ + L+ +
Sbjct: 13 MGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF 72
Query: 235 KDMISLA------VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKR 288
+ + A H N++RL + LV+ ++ G + + +
Sbjct: 73 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 132
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVT 345
+ Y H I+HR++K N+LL + + DFGLA ++ +DS
Sbjct: 133 CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAW 187
Query: 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT G+++PE L S+ D++ G++L L+ G
Sbjct: 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 50/212 (23%)
Query: 210 LGAGGFGNVYKG---KLGDGTVL---------------AVKRLKDMISLAVHRNLLRLIG 251
+G G FG V+K K G L A++ +K ++ L H N++ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLIE 84
Query: 252 YC---ATPTER-----LLVYPY--------MSNGSVASRLREKPALDWNTRKRIAIGAAR 295
C A+P R LV+ + +SN V L E KR+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI--------KRVMQMLLN 136
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK---LLDHSDSHVTTAVRGTV 352
GL Y+H KI+HRD+KAANVL+ + DFGLA+ L +S + T+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 353 GHIAPE-YLSTGQSSEKTDVFGFGILLLELIT 383
+ PE L D++G G ++ E+ T
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+ + R L YLH Q +IHRD+K+ ++LL + DFG + V
Sbjct: 146 VCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV 202
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT +APE +S + D++ GI+++E+I G
Sbjct: 203 -GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 209 ILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAVHRNLLRLIGYCATP 256
+LG+GGFG+VY G ++ D +A+K + KD IS + + LL+ + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 257 TERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLLY-----LHEQCDPK 307
RLL + + V R +P D R + AR + + +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 308 IIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSS 366
++HRD+K N+L+D + E + DFG LL + V T GT + PE++ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 187
Query: 367 EKT-DVFGFGILLLELITGMRALEFGKSI 394
++ V+ GILL +++ G E + I
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 209 ILGAGGFGNVYKG-KLGDGTVLAVKRL-KDMIS----------LAVHRNLLRLIGYCATP 256
+LG+GGFG+VY G ++ D +A+K + KD IS + + LL+ + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 257 TERLLVYPYMSNGSVASRLREKPALDW----NTRKRIAIGAARGLLY-----LHEQCDPK 307
RLL + + V R +P D R + AR + + +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 308 IIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSS 366
++HRD+K N+L+D + E + DFG LL + V T GT + PE++ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 187
Query: 367 EKT-DVFGFGILLLELITGMRALEFGKSI 394
++ V+ GILL +++ G E + I
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 50/212 (23%)
Query: 210 LGAGGFGNVYKG---KLGDGTVL---------------AVKRLKDMISLAVHRNLLRLIG 251
+G G FG V+K K G L A++ +K ++ L H N++ LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLIE 83
Query: 252 YC---ATPTER-----LLVYPY--------MSNGSVASRLREKPALDWNTRKRIAIGAAR 295
C A+P R LV+ + +SN V L E KR+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--------KRVMQMLLN 135
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK---LLDHSDSHVTTAVRGTV 352
GL Y+H KI+HRD+KAANVL+ + DFGLA+ L +S + T+
Sbjct: 136 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 192
Query: 353 GHIAPE-YLSTGQSSEKTDVFGFGILLLELIT 383
+ PE L D++G G ++ E+ T
Sbjct: 193 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-V 348
+ A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + +V
Sbjct: 204 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
R + +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC--------- 311
Query: 409 XXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 312 ---RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-V 348
+ A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + +V
Sbjct: 206 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
R + +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC--------- 313
Query: 409 XXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 314 ---RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 181 EGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGK-LGDGTVLAVK------- 232
EG++ L+ + E ++ + + +G G FG V++ K G AVK
Sbjct: 38 EGVLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF 96
Query: 233 RLKDMISLA--VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
R++++++ A ++ L G + + GS+ +++ L R
Sbjct: 97 RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP-EDRALYY 155
Query: 291 IGAA-RGLLYLHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLL--DHSDSHVTT 346
+G A GL YLH + +I+H DVKA NVLL D A + DFG A L D + T
Sbjct: 156 LGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212
Query: 347 A--VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT H+APE + K D++ ++L ++ G
Sbjct: 213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 50/212 (23%)
Query: 210 LGAGGFGNVYKG---KLGDGTVL---------------AVKRLKDMISLAVHRNLLRLIG 251
+G G FG V+K K G L A++ +K ++ L H N++ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK-ILQLLKHENVVNLIE 84
Query: 252 YC---ATPTER-----LLVYPY--------MSNGSVASRLREKPALDWNTRKRIAIGAAR 295
C A+P R LV+ + +SN V L E KR+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--------KRVMQMLLN 136
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK---LLDHSDSHVTTAVRGTV 352
GL Y+H KI+HRD+KAANVL+ + DFGLA+ L +S + T+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 353 GHIAPE-YLSTGQSSEKTDVFGFGILLLELIT 383
+ PE L D++G G ++ E+ T
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 31/218 (14%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+K+++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 245 NLLRLIGYCATPTERLLVYPY----MSNGSVASRLREKPALDWNTRKRIAIGAARGLLYL 300
N+++L+ T + LV+ + + AS L P K +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPL---PLIKSYLFQLLQGLAFC 118
Query: 301 HEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY- 359
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEIL 174
Query: 360 LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 211
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-V 348
+ A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + +V
Sbjct: 199 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
R + +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC--------- 306
Query: 409 XXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 307 ---RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 181 EGLISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKLGD-GTVLAVK------- 232
EG++ L+ + E ++ + + +G G FG V++ K G AVK
Sbjct: 54 EGVLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF 112
Query: 233 RLKDMISLA--VHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
R++++++ A ++ L G + + GS+ +++ L R
Sbjct: 113 RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP-EDRALYY 171
Query: 291 IGAA-RGLLYLHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLL--DHSDSHVTT 346
+G A GL YLH + +I+H DVKA NVLL D A + DFG A L D + T
Sbjct: 172 LGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 228
Query: 347 A--VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT H+APE + K D++ ++L ++ G
Sbjct: 229 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 176
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 214
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-V 348
+ A+G+ +L + K IHRD+ A N+LL + + DFGLA+ + +V
Sbjct: 197 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXX 408
R + +APE + + ++DV+ FG+LL E+ + + G I+++
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC--------- 304
Query: 409 XXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
R +Y E+ Q L C P RP SE+V L
Sbjct: 305 ---RRLKEGTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 288 RIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA 347
+IA+ + L +LH + +IHRDVK +NVL++ + + DFG++ L D
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDI 168
Query: 348 VRGTVGHIAPEY----LSTGQSSEKTDVFGFGILLLEL 381
G ++APE L+ S K+D++ GI ++EL
Sbjct: 169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 25/228 (10%)
Query: 196 ELQQATENFSSKNILGAGGFGNVYKGKLGD-GTVLAVKRLK------------------- 235
+++ + + + LG G F VYK + + ++A+K++K
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 236 DMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAAR 295
++ H N++ L+ + LV+ +M L + K + +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ 123
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
GL YLH+ I+HRD+K N+LLD+ + DFGLAK + V T +
Sbjct: 124 GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYR 179
Query: 356 APEYLSTGQ-SSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
APE L + D++ G +L EL+ + L ++Q + E
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFE 227
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 174
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 121 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 176
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 214
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 123 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 178
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 216
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 174
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 177
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 176
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 214
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 174
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 175
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 213
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 175
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 213
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 41/212 (19%)
Query: 210 LGAGGFGNVYKGKL-----GDGT-VLAVKRLKD---------------MISLAVHRNLLR 248
LG FG VYKG L G+ T +A+K LKD + + H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRL----------------REKPALDWNTRKRIAIG 292
L+G +++ Y S+G + L K AL+ +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 293 AARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGT 351
A G+ YL ++H+D+ NVL+ D + D GL + + +D + +
Sbjct: 154 IAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 352 VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+ +APE + G+ S +D++ +G++L E+ +
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 177
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 174
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 31/220 (14%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 243 HRNLLRLIGYCATPTERLLVYPYM----SNGSVASRLREKPALDWNTRKRIAIGAARGLL 298
H N+++L+ T + LV+ ++ + AS L P K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPL---PLIKSYLFQLLQGLA 117
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+ H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPE 173
Query: 359 Y-LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+K+++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLYLH 301
N+++L+ T + LV+ ++ + + AL K +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-L 360
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILL 175
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
S D++ G + E++T RAL G S I+Q
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 211
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+K+++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLYLH 301
N+++L+ T + LV+ ++ + + AL K +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-L 360
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILL 175
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
S D++ G + E++T RAL G S I+Q
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 211
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 30/212 (14%)
Query: 209 ILGAGGFGNVYKG-KLGDGTVLAVK-----------RLKDMISLAVHRNLLRLIGYCA-- 254
+LG GGFG V+ G +L D +A+K L D ++ + LL +G
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 255 TPTERLLVYPYMSNGSVASRLREKPA---LDWNTRK-RIAIGAAR----GLLYLHEQCDP 306
RLL + G + R PA D+ T K + G +R ++ + C
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS 157
Query: 307 K-IIHRDVKAANVLLD--DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+ ++HRD+K N+L+D C ++ DFG LL H + + T GT + PE++S
Sbjct: 158 RGVVHRDIKDENILIDLRRGCAKLI-DFGSGALL-HDEPY--TDFDGTRVYSPPEWISRH 213
Query: 364 Q-SSEKTDVFGFGILLLELITGMRALEFGKSI 394
Q + V+ GILL +++ G E + I
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPFERDQEI 245
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N++R TPT +V Y S G + R+ + + G+ Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 303 QCDPKIIHRDVKAANVLLD--DFCEAIVGDFGLAK-LLDHSDSHVTTAVRGTVGHIAPEY 359
++ HRD+K N LLD + DFG +K + HS T GT +IAPE
Sbjct: 134 M---QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEV 187
Query: 360 LSTGQSSEKT-DVFGFGILLLELITGMRALE 389
L + K DV+ G+ L ++ G E
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 24/204 (11%)
Query: 201 TENFSSKNILGAGGF-----------GNVYKGKLGDGTVLAVK------RLKDMISLAVH 243
T+ + +G G F G+ Y K+ + L+ + R + L H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
N++RL + LV+ ++ G + + + +L+ H+
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 304 CDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
++HRD+K N+LL C+ + DFGLA + D GT G+++PE L
Sbjct: 123 ---GVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 361 STGQSSEKTDVFGFGILLLELITG 384
+ D++ G++L L+ G
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVG 202
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 39/212 (18%)
Query: 206 SKNILGAGGFGNVYKG-KLGDGTVLAVK---------------RLKDMISLAVHRNLLRL 249
+ +LG G + V L +G AVK ++ + ++N+L L
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 250 IGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKII 309
I + T LV+ + GS+ + ++++ + R+ A L +LH + I
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK---GIA 133
Query: 310 HRDVKAANVLLD--------DFCEAIVGDFGLAKLLDHSDSHVT----TAVRGTVGHIAP 357
HRD+K N+L + C+ D G L++S + +T T G+ ++AP
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDF---DLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 358 EYLS--TGQSS---EKTDVFGFGILLLELITG 384
E + T Q++ ++ D++ G++L +++G
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 261 LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL 320
+V YM G + S LR + A YLH +I+RD+K N+L+
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 321 DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE 380
D V DFG AK + T + GT ++APE + + ++ D + G+L+ E
Sbjct: 175 DQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 381 LITG 384
+ G
Sbjct: 231 MAAG 234
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+K+++ ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLYLH 301
N+++L+ T + LV+ ++ + + AL K +GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-L 360
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILL 177
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
S D++ G + E++T RAL G S I+Q
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 213
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 261 LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL 320
+V YM G + S LR + A YLH +I+RD+K N+L+
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 321 DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE 380
D V DFG AK + T + GT ++APE + + ++ D + G+L+ E
Sbjct: 175 DQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 381 LITG 384
+ G
Sbjct: 231 MAAG 234
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 10/167 (5%)
Query: 232 KRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI 291
+ ++ ++ H N++ L LV M G + ++ + +
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH 128
Query: 292 GAARGLLYLHEQCDPKIIHRDVKAANVLLDDF-----CEAIVGDFGLAKLLDHSDSHVTT 346
+ + YLH Q ++HRD+K +N+L D C I DFG AK L + + T
Sbjct: 129 TIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRIC-DFGFAKQLRAENGLLMT 184
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS 393
T +APE L E D++ GILL ++ G G S
Sbjct: 185 PCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS 230
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N++R TPT +V Y S G + R+ + + G+ Y H
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 303 QCDPKIIHRDVKAANVLLD--DFCEAIVGDFGLAK-LLDHSDSHVTTAVRGTVGHIAPEY 359
++ HRD+K N LLD + DFG +K + HS T GT +IAPE
Sbjct: 133 M---QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEV 186
Query: 360 LSTGQSSEKT-DVFGFGILLLELITGMRALE 389
L + K DV+ G+ L ++ G E
Sbjct: 187 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N++R TPT ++ Y S G + R+ + + G+ Y H
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 303 QCDPKIIHRDVKAANVLLD--DFCEAIVGDFGLAK-LLDHSDSHVTTAVRGTVGHIAPEY 359
+I HRD+K N LLD + DFG +K + HS T GT +IAPE
Sbjct: 135 M---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEV 188
Query: 360 LSTGQSSEK-TDVFGFGILLLELITGMRALE 389
L + K DV+ G+ L ++ G E
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+ +++ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLYLH 301
N+++L+ T + LV+ ++ + + AL K +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-L 360
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
S D++ G + E++T RAL G S I+Q
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHR 244
ENF +G G +G VYK + G V+A+ +++ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLYLH 301
N+++L+ T + LV+ ++ + + AL K +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-L 360
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 361 STGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
S D++ G + E++T RAL G S I+Q
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 211
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 182 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA----TWTLCGTPEYLAPEIILSK 234
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 235 GYNKAVDWWALGVLIYEMAAG 255
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 29/202 (14%)
Query: 205 SSKNILGAGGFGNVYK-GKLGDGTVLAVK-----------RLKDMISLA---VHRNLLRL 249
S ILG G FG V+K + G LA K +K+ IS+ H NL++L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 250 IGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI----GAARGLLYLHEQCD 305
+ + +LV Y+ G + R+ ++ +N + I G+ ++H+
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDES---YNLTELDTILFMKQICEGIRHMHQMY- 207
Query: 306 PKIIHRDVKAANVLL--DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
I+H D+K N+L D + + DFGLA+ + GT +APE ++
Sbjct: 208 --ILHLDLKPENILCVNRDAKQIKIIDFGLARR--YKPREKLKVNFGTPEFLAPEVVNYD 263
Query: 364 QSSEKTDVFGFGILLLELITGM 385
S TD++ G++ L++G+
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGL 285
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNG----SVASRLREKPALDWNTRKRIAIGAARGLL 298
H N+++L+ T + LV+ ++ AS L P K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+ H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPE 176
Query: 359 Y-LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 84/219 (38%), Gaps = 40/219 (18%)
Query: 195 RELQQATENFSSKNILGAGGFGN-----------VYKGKL---------GDGTVLAVKRL 234
R+L+ E++ ++G G FG VY KL D +R
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER- 120
Query: 235 KDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-----EKPALDWNTRKRI 289
D+++ A +++L +V YM G + + + EK A + +
Sbjct: 121 -DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL 179
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVR 349
A+ A + + IHRDVK N+LLD + DFG ++
Sbjct: 180 ALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 230
Query: 350 GTVGHIAPEYLST----GQSSEKTDVFGFGILLLELITG 384
GT +I+PE L + G + D + G+ L E++ G
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 41/212 (19%)
Query: 210 LGAGGFGNVYKGKL-----GDGT-VLAVKRLKD---------------MISLAVHRNLLR 248
LG FG VYKG L G+ T +A+K LKD + + H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 249 LIGYCATPTERLLVYPYMSNGSVASRL----------------REKPALDWNTRKRIAIG 292
L+G +++ Y S+G + L K AL+ +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 293 AARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGT 351
A G+ YL ++H+D+ NVL+ D + D GL + + +D + +
Sbjct: 137 IAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 352 VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383
+ +APE + G+ S +D++ +G++L E+ +
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 84/219 (38%), Gaps = 40/219 (18%)
Query: 195 RELQQATENFSSKNILGAGGFG-----------NVYKGKL---------GDGTVLAVKRL 234
R+L+ E++ ++G G FG VY KL D +R
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER- 125
Query: 235 KDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-----EKPALDWNTRKRI 289
D+++ A +++L +V YM G + + + EK A + +
Sbjct: 126 -DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL 184
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVR 349
A+ A + + IHRDVK N+LLD + DFG ++
Sbjct: 185 ALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 350 GTVGHIAPEYLST----GQSSEKTDVFGFGILLLELITG 384
GT +I+PE L + G + D + G+ L E++ G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 147
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D+ V DFG AK + T + GT ++APE + +
Sbjct: 148 ---DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 200
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 201 GYNKAVDWWALGVLIYEMAAG 221
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 25/204 (12%)
Query: 201 TENFSSKNILGAGGFGNV-----------YKGKLGDGTVLAVKRLKDMISLA------VH 243
++N+ K LG G F V + K+ + L+ + + + A H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
N++RL + LV+ ++ G + + + + Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 304 CDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
I+HR++K N+LL + + DFGLA ++ +DS GT G+++PE L
Sbjct: 125 ---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 361 STGQSSEKTDVFGFGILLLELITG 384
S+ D++ G++L L+ G
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVG 203
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDGT-VLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 84/219 (38%), Gaps = 40/219 (18%)
Query: 195 RELQQATENFSSKNILGAGGFG-----------NVYKGKL---------GDGTVLAVKRL 234
R+L+ E++ ++G G FG VY KL D +R
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER- 125
Query: 235 KDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLR-----EKPALDWNTRKRI 289
D+++ A +++L +V YM G + + + EK A + +
Sbjct: 126 -DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL 184
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVR 349
A+ A + + IHRDVK N+LLD + DFG ++
Sbjct: 185 ALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 350 GTVGHIAPEYLST----GQSSEKTDVFGFGILLLELITG 384
GT +I+PE L + G + D + G+ L E++ G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 295 RGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGH 354
+ L YLH Q +IHRD+K+ ++LL + DFG + D + GT
Sbjct: 152 QALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKXLVGTPYW 207
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+APE +S + + D++ GI+++E++ G
Sbjct: 208 MAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 25/204 (12%)
Query: 201 TENFSSKNILGAGGFGNV-----------YKGKLGDGTVLAVKRLKDMISLA------VH 243
++N+ K LG G F V + K+ + L+ + + + A H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
N++RL + LV+ ++ G + + + + Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 304 CDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
I+HR++K N+LL + + DFGLA ++ +DS GT G+++PE L
Sbjct: 125 ---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 361 STGQSSEKTDVFGFGILLLELITG 384
S+ D++ G++L L+ G
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 25/204 (12%)
Query: 201 TENFSSKNILGAGGFGNV-----------YKGKLGDGTVLAVKRLKDMISLA------VH 243
++N+ K LG G F V + K+ + L+ + + + A H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
N++RL + LV+ ++ G + + + + Y H
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 304 CDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
I+HR++K N+LL + + DFGLA ++ +DS GT G+++PE L
Sbjct: 124 ---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 178
Query: 361 STGQSSEKTDVFGFGILLLELITG 384
S+ D++ G++L L+ G
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVG 202
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAV 242
+ ENF +G G +G VYK + G V+A+K+++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALD---WNTRKRIAIGAARGLLY 299
H N+++L+ T + LV+ ++ + + AL K +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 300 LHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY 359
H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEI 177
Query: 360 -LSTGQSSEKTDVFGFGILLLELITGMRALEFGKS-INQ 396
L S D++ G + E++T RAL G S I+Q
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 39/202 (19%)
Query: 210 LGAGGFGNVYKG-KLGDGTVLAVK-----------RLKDMISLA---VHRNLLRLIGYCA 254
LG+G FG V++ + G V K +K+ IS+ H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 255 TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAAR----GLLYLHEQCDPKIIH 310
E +L+ ++S G + R+ A D+ + I R GL ++HE I+H
Sbjct: 119 DKYEMVLILEFLSGGELFDRI---AAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVH 172
Query: 311 RDVKAANVLLDDFCE------AIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTG 363
D+K N++ CE + DFGLA L+ + VTTA T APE +
Sbjct: 173 LDIKPENIM----CETKKASSVKIIDFGLATKLNPDEIVKVTTA---TAEFAAPEIVDRE 225
Query: 364 QSSEKTDVFGFGILLLELITGM 385
TD++ G+L L++G+
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGL 247
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 22/203 (10%)
Query: 199 QATENFSSKNILGAGGFGNVYKGKLGDGTVL--AVK-----------RLKDMISLAVHRN 245
Q T+ + K +G G + +V K + T + AVK ++ ++ H N
Sbjct: 19 QFTDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPN 77
Query: 246 LLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD 305
++ L +V M G + ++ + + + + YLH Q
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ-- 135
Query: 306 PKIIHRDVKAANVLLDDFC---EAI-VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
++HRD+K +N+L D E+I + DFG AK L + + T T +APE L
Sbjct: 136 -GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLE 193
Query: 362 TGQSSEKTDVFGFGILLLELITG 384
D++ G+LL ++TG
Sbjct: 194 RQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDGT-VLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N++R TPT +V Y S G + R+ + + G+ Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 303 QCDPKIIHRDVKAANVLLD--DFCEAIVGDFGLAKL-LDHSDSHVTTAVRGTVGHIAPEY 359
++ HRD+K N LLD + DFG +K + HS +AV GT +IAPE
Sbjct: 134 M---QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQP--KSAV-GTPAYIAPEV 187
Query: 360 LSTGQSSEKT-DVFGFGILLLELITGMRALE-------FGKSINQ 396
L + K DV+ G+ L ++ G E F K+I++
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHR 232
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 257 TERLLVYPYMSNGSVASRLREKPA--LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314
+E +L+ Y + G + S + A + N R+ G+ YLH+ I+H D+K
Sbjct: 102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLK 158
Query: 315 AANVLLDDFC---EAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 371
N+LL + + DFG+++ + H+ + GT ++APE L+ + TD+
Sbjct: 159 PQNILLSSIYPLGDIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDM 216
Query: 372 FGFGILLLELIT 383
+ GI+ L+T
Sbjct: 217 WNIGIIAYMLLT 228
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 42/245 (17%)
Query: 184 ISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----DMIS 239
+ LG N F+ + +S +G+GG V++ + A+K + D +
Sbjct: 11 VDLGT-ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT 69
Query: 240 LAVHRN--------------LLRLIGYCATPTERLLVYPYMSNGSVA--SRLREKPALDW 283
L +RN ++RL Y T +Y M G++ S L++K ++D
Sbjct: 70 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP 126
Query: 284 NTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLA-KLLDHSDS 342
RK + +H+ I+H D+K AN L+ D ++ DFG+A ++ + S
Sbjct: 127 WERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTS 182
Query: 343 HVTTAVRGTVGHIAPEYLSTGQSSEKT-----------DVFGFGILLLELITGMRALEFG 391
V + GTV ++ PE + SS + DV+ G +L + G F
Sbjct: 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG--KTPFQ 240
Query: 392 KSINQ 396
+ INQ
Sbjct: 241 QIINQ 245
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------LGDGTVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V K L V+ +K+++ I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + Y L +V Y+ G + S LR + A YLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDGT-VLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-- 159
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 160 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 214
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------LGDGTVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V K L V+ +K+++ I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + Y L +V Y+ G + S LR + A YLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDGT-VLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-- 158
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 101/237 (42%), Gaps = 53/237 (22%)
Query: 199 QATENFSSKNILGAGGFGNVYKG--KLGDGTVLAVKRL----KDMI-------SLAV--- 242
Q + + ++++G G +G+V + KL + V+A+K++ +D+I +A+
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAYDKL-EKRVVAIKKILRVFEDLIDCKRILREIAILNR 108
Query: 243 --HRNLLRLIGYC----ATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG 296
H ++++++ + L V +++ R L K + G
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVG 168
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS-------------- 342
+ Y+H I+HRD+K AN L++ C V DFGLA+ +D+ ++
Sbjct: 169 VKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 343 ------HVTTAVRGTVGHI------APEYLSTGQS-SEKTDVFGFGILLLELITGMR 386
H R GH+ APE + ++ +E DV+ G + EL+ ++
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y G + S LR + A YLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 214
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + + T T + APE + E
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--STNFMMTPYVVTRYYRAPEVILGMGYKE 202
Query: 368 KTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
D++ G ++ EL+ G + I+Q ++E
Sbjct: 203 NVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIE 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNVYKGK------------LGDGTVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V K L V+ +K+++ I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + Y L +V Y+ G + S LR + A YLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-- 158
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 181
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 182 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 234
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 235 GYNKAVDWWALGVLIYEMAAG 255
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 86/216 (39%), Gaps = 35/216 (16%)
Query: 197 LQQATENFSSK-------NILGAGGFGNVYKGK-LGDGTVLAVKRLKDMISLAVHRNLLR 248
Q A ENF K LG G +G V K + + G + AVKR++ ++ + LL
Sbjct: 22 FQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLX 81
Query: 249 LIGYCATPTERLLVYPY----MSNGSV---------------ASRLREKPALDWNTRKRI 289
+ + + G V + + + + +I
Sbjct: 82 DLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKI 141
Query: 290 AIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVR 349
A+ + L +LH + +IHRDVK +NVL++ + DFG++ L D
Sbjct: 142 AVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYL--VDDVAKDIDA 197
Query: 350 GTVGHIAPEY----LSTGQSSEKTDVFGFGILLLEL 381
G + APE L+ S K+D++ GI +EL
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH-- 153
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 154 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 208
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 209 GYNKAVDWWALGVLIYEMAAG 229
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
+KR + + H +++ L+ ++ +V+ +M + + ++ + + +A
Sbjct: 75 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 291 IGAARGLLYLHEQC-DPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTT 346
R +L C D IIHRDVK VLL ++ +G FG+A L S V
Sbjct: 135 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES-GLVAG 193
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT +APE + + DV+G G++L L++G
Sbjct: 194 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDGT-VLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIILSK 214
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 146
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 147 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIILSK 199
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 200 GYNKAVDWWALGVLIYEMAAG 220
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 153
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 154 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 206
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 207 GYNKAVDWWALGVLIYEMAAG 227
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 214
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 182 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 234
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 235 GYNKAVDWWALGVLIYEMAAG 255
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 29/203 (14%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDGTVLAVKRLKDMISLAVHRNLLRLI 250
+ F LG G FG V Y K+ D V +LK++ + +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKEIEHTLNEKRILQAV 98
Query: 251 GY---------CATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH 301
+ + +V Y G + S LR + A YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
+I+RD+K N+++D V DFGLAK + T + GT ++APE +
Sbjct: 159 SL---DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 362 TGQSSEKTDVFGFGILLLELITG 384
+ ++ D + G+L+ E+ G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 214
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 29/203 (14%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDGTVLAVKRLKDMISLAVHRNLLRLI 250
+ F LG G FG V Y K+ D V +LK++ + +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ--KVVKLKEIEHTLNEKRILQAV 98
Query: 251 GY---------CATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH 301
+ + +V Y G + S LR + A YLH
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 302 EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361
+I+RD+K N+++D V DFGLAK + T + GT ++APE +
Sbjct: 159 SL---DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 362 TGQSSEKTDVFGFGILLLELITG 384
+ ++ D + G+L+ E+ G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 214
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH-- 158
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
+KR + + H +++ L+ ++ +V+ +M + + ++ + + +A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 291 IGAARGLLYLHEQC-DPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTT 346
R +L C D IIHRDVK VLL ++ +G FG+A L S V
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES-GLVAG 191
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT +APE + + DV+G G++L L++G
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 297 LLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIA 356
L +LH Q ++H DVK AN+ L +GDFGL L++ + G ++A
Sbjct: 170 LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMA 224
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQ 396
PE L G DVF G+ +LE+ M G+ Q
Sbjct: 225 PELLQ-GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQ 263
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 214
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 43/246 (17%)
Query: 177 DKQEEGLISLG------NLRNFTFRELQQ------------ATENFSSKNILGAGGFGNV 218
D E+G I G N N+ F +Q +++ LG G FG V
Sbjct: 114 DVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVV 173
Query: 219 YK-GKLGDGTVLAVKRL------------KDMISLAV--HRNLLRLIGYCATPTERLLVY 263
++ + G A K + K++ +++V H L+ L E +++Y
Sbjct: 174 HRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233
Query: 264 PYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL-- 320
+MS G + ++ E + + +GL ++HE +H D+K N++
Sbjct: 234 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTT 290
Query: 321 DDFCEAIVGDFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLL 379
E + DFGL LD S VTT GT APE TD++ G+L
Sbjct: 291 KRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSY 347
Query: 380 ELITGM 385
L++G+
Sbjct: 348 ILLSGL 353
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 153
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 154 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 206
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 207 GYNKAVDWWALGVLIYEMAAG 227
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 299 YLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
YLHE IIHRD+K NVLL ++ C + DFG +K+L ++ + + GT ++
Sbjct: 254 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYL 308
Query: 356 APEYL---STGQSSEKTDVFGFGILLLELITG 384
APE L T + D + G++L ++G
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+++D V DFG AK + T + GT ++APE + +
Sbjct: 159 -SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIISK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 299 YLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
YLHE IIHRD+K NVLL ++ C + DFG +K+L ++ + + GT ++
Sbjct: 268 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYL 322
Query: 356 APEYL---STGQSSEKTDVFGFGILLLELITG 384
APE L T + D + G++L ++G
Sbjct: 323 APEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 261 LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL 320
+V Y+ G + S LR + A YLH +I+RD+K N+L+
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 321 DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLE 380
D V DFG AK + T + GT ++APE + + ++ D + G+L+ E
Sbjct: 175 DQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 381 LITG 384
+ G
Sbjct: 231 MAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 299 YLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
YLHE IIHRD+K NVLL ++ C + DFG +K+L ++ + + GT ++
Sbjct: 129 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYL 183
Query: 356 APEYL---STGQSSEKTDVFGFGILLLELITG 384
APE L T + D + G++L ++G
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 299 YLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
YLHE IIHRD+K NVLL ++ C + DFG +K+L ++ + + GT ++
Sbjct: 129 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYL 183
Query: 356 APEYL---STGQSSEKTDVFGFGILLLELITG 384
APE L T + D + G++L ++G
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+ + + L LH Q +IHRD+K+ ++LL + DFG + V
Sbjct: 252 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 308
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT +APE +S + D++ GI+++E++ G
Sbjct: 309 -GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 299 YLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
YLHE IIHRD+K NVLL ++ C + DFG +K+L ++ + + GT ++
Sbjct: 128 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYL 182
Query: 356 APEYL---STGQSSEKTDVFGFGILLLELITG 384
APE L T + D + G++L ++G
Sbjct: 183 APEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 299 YLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
YLHE IIHRD+K NVLL ++ C + DFG +K+L ++ + + GT ++
Sbjct: 135 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYL 189
Query: 356 APEYL---STGQSSEKTDVFGFGILLLELITG 384
APE L T + D + G++L ++G
Sbjct: 190 APEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 43/246 (17%)
Query: 177 DKQEEGLISLG------NLRNFTFRELQQ------------ATENFSSKNILGAGGFGNV 218
D E+G I G N N+ F +Q +++ LG G FG V
Sbjct: 8 DVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVV 67
Query: 219 YK-GKLGDGTVLAVKRL------------KDMISLAV--HRNLLRLIGYCATPTERLLVY 263
++ + G A K + K++ +++V H L+ L E +++Y
Sbjct: 68 HRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 127
Query: 264 PYMSNGSVASRL-REKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL-- 320
+MS G + ++ E + + +GL ++HE +H D+K N++
Sbjct: 128 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTT 184
Query: 321 DDFCEAIVGDFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLL 379
E + DFGL LD S VTT GT APE TD++ G+L
Sbjct: 185 KRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSY 241
Query: 380 ELITGM 385
L++G+
Sbjct: 242 ILLSGL 247
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 299 YLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
YLHE IIHRD+K NVLL ++ C + DFG +K+L ++ + + GT ++
Sbjct: 129 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYL 183
Query: 356 APEYL---STGQSSEKTDVFGFGILLLELITG 384
APE L T + D + G++L ++G
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y+ G + S LR + A YLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 214
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ ++ G
Sbjct: 214 GYNKAVDWWALGVLIYQMAAG 234
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 73/180 (40%), Gaps = 51/180 (28%)
Query: 18 QSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQT-LDLSNNRLSGVIP--- 73
+LSGTL SI +L NL + N ISG IP GS KL T + +S NRL+G IP
Sbjct: 135 NALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTF 194
Query: 74 -------------------ALLF---------------LSIWLPRKWDKRKCSGVDQGXX 99
++LF L+ L + + +G+D
Sbjct: 195 ANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLD---- 250
Query: 100 XXXXXXXXGAFPVFLAKISELAFLDLSYNNLSGPVP------KFPARTFNVAGNPLICGS 153
G P L ++ L L++S+NNL G +P +F + A N +CGS
Sbjct: 251 -LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAY--ANNKCLCGS 307
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 12/126 (9%)
Query: 18 QSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVI-PALL 76
+L G + +I LT L + + + N+SG IP L + L TLD S N LSG + P++
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 77 FLSIWLPRKWDKRKCSGVDQG----------XXXXXXXXXXGAFPVFLAKISELAFLDLS 126
L + +D + SG G P A + LAF+DLS
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLS 205
Query: 127 YNNLSG 132
N L G
Sbjct: 206 RNMLEG 211
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 108 GAFPVFLAKISELAFLDLSYNNLSGPVPKFPARTFNVAG 146
GA P FL++I L LD SYN LSG +P + N+ G
Sbjct: 115 GAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 108 GAFPVFLAKISELAFLDLSYNNLSGPVPKF 137
G P +AK+++L +L +++ N+SG +P F
Sbjct: 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDF 120
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 42/245 (17%)
Query: 184 ISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----DMIS 239
+ LG N F+ + +S +G+GG V++ + A+K + D +
Sbjct: 11 VDLGT-ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT 69
Query: 240 LAVHRN--------------LLRLIGYCATPTERLLVYPYMSNGSVA--SRLREKPALDW 283
L +RN ++RL Y T +Y M G++ S L++K ++D
Sbjct: 70 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP 126
Query: 284 NTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343
RK + +H+ I+H D+K AN L+ D ++ DFG+A +
Sbjct: 127 WERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXX 182
Query: 344 VTTAVR-GTVGHIAPEYLSTGQSSEKT-----------DVFGFGILLLELITGMRALEFG 391
V + GTV ++ PE + SS + DV+ G +L + G F
Sbjct: 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG--KTPFQ 240
Query: 392 KSINQ 396
+ INQ
Sbjct: 241 QIINQ 245
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 87/212 (41%), Gaps = 33/212 (15%)
Query: 197 LQQATENFSSKNILGAGGFGNVY--KGKLGDGTVLAVKRLKD------------MISLAV 242
Q ++ + LG+G +G V K KL G A+K +K + +AV
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAV 74
Query: 243 -----HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGL 297
H N+++L + LV G + + + I G
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGT 134
Query: 298 LYLHEQCDPKIIHRDVKAANVLLD----DFCEAIVGDFGLAKLLDHSDSHVTTAVR-GTV 352
YLH+ I+HRD+K N+LL+ D IV DFGL+ H + R GT
Sbjct: 135 TYLHKH---NIVHRDLKPENLLLESKSRDALIKIV-DFGLSA---HFEVGGKMKERLGTA 187
Query: 353 GHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+IAPE L + EK DV+ G++L L+ G
Sbjct: 188 YYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+ + + L LH Q +IHRD+K+ ++LL + DFG + V
Sbjct: 175 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 231
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT +APE +S + D++ GI+++E++ G
Sbjct: 232 -GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 35/216 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK----DMISLAVHRNLLRLIGYCATPTERLL---- 261
+G+GG V++ + A+K + D +L +RN + + +++++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 262 -------VYPYMSNGSVA--SRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRD 312
+Y M G++ S L++K ++D RK + +H+ I+H D
Sbjct: 77 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSD 133
Query: 313 VKAANVLLDDFCEAIVGDFGLA-KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKT-- 369
+K AN L+ D ++ DFG+A ++ + S V + GTV ++ PE + SS +
Sbjct: 134 LKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 192
Query: 370 ---------DVFGFGILLLELITGMRALEFGKSINQ 396
DV+ G +L + G F + INQ
Sbjct: 193 SKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQ 226
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y G + S LR + A YLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+++D V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 214
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y G + S LR + A YLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+++D V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 214
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 35/216 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK----DMISLAVHRNLLRLIGYCATPTERLL---- 261
+G+GG V++ + A+K + D +L +RN + + +++++
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 262 -------VYPYMSNGSVA--SRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRD 312
+Y M G++ S L++K ++D RK + +H+ I+H D
Sbjct: 80 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSD 136
Query: 313 VKAANVLLDDFCEAIVGDFGLA-KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKT-- 369
+K AN L+ D ++ DFG+A ++ + S V + GTV ++ PE + SS +
Sbjct: 137 LKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 195
Query: 370 ---------DVFGFGILLLELITGMRALEFGKSINQ 396
DV+ G +L + G F + INQ
Sbjct: 196 SKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQ 229
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 310 HRDVKAANVLL--DDFCEAIVGDFGLAK-LLDHSDSHVTTAVRGTVGHIAPEYLSTGQSS 366
HRDVK N+L+ DDF A + DFG+A D + + V GT+ + APE S ++
Sbjct: 157 HRDVKPENILVSADDF--AYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHAT 213
Query: 367 EKTDVFGFGILLLELITG 384
+ D++ +L E +TG
Sbjct: 214 YRADIYALTCVLYECLTG 231
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT +APE + +
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEALAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 35/216 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK----DMISLAVHRNLLRLIGYCATPTERLL---- 261
+G+GG V++ + A+K + D +L +RN + + +++++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 262 -------VYPYMSNGSVA--SRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRD 312
+Y M G++ S L++K ++D RK + +H+ I+H D
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSD 180
Query: 313 VKAANVLLDDFCEAIVGDFGLA-KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKT-- 369
+K AN L+ D ++ DFG+A ++ + S V + GTV ++ PE + SS +
Sbjct: 181 LKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 239
Query: 370 ---------DVFGFGILLLELITGMRALEFGKSINQ 396
DV+ G +L + G F + INQ
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYG--KTPFQQIINQ 273
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFC---EAI-VGDFGLAKLLDHSDSHVTTAVRGTVGH 354
YLH Q ++HRD+K +N+L D E+I + DFG AK L + + T T
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANF 186
Query: 355 IAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+APE L D++ G+LL +TG
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y G + S LR + A YLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+++D V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 214
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 24/204 (11%)
Query: 201 TENFSSKNILGAGGFGNV-----------YKGKLGDGTVLAVK------RLKDMISLAVH 243
T+++ LG G F V Y K+ + L+ + R + L H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
N++RL + LV+ ++ G + + + + ++H+
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 304 CDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL 360
I+HRD+K N+LL C+ + DFGLA + + GT G+++PE L
Sbjct: 150 ---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVL 205
Query: 361 STGQSSEKTDVFGFGILLLELITG 384
+ D++ G++L L+ G
Sbjct: 206 RKDPYGKPVDIWACGVILYILLVG 229
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 35/216 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK----DMISLAVHRNLLRLIGYCATPTERLL---- 261
+G+GG V++ + A+K + D +L +RN + + +++++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 262 -------VYPYMSNGSVA--SRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRD 312
+Y M G++ S L++K ++D RK + +H+ I+H D
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSD 180
Query: 313 VKAANVLLDDFCEAIVGDFGLA-KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKT-- 369
+K AN L+ D ++ DFG+A ++ + S V + GTV ++ PE + SS +
Sbjct: 181 LKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 239
Query: 370 ---------DVFGFGILLLELITGMRALEFGKSINQ 396
DV+ G +L + G F + INQ
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYG--KTPFQQIINQ 273
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+++D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+ + + L LH Q +IHRD+K+ ++LL + DFG + V
Sbjct: 132 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 188
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT +APE +S + D++ GI+++E++ G
Sbjct: 189 -GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+ + + L LH Q +IHRD+K+ ++LL + DFG + V
Sbjct: 130 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 186
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT +APE +S + D++ GI+++E++ G
Sbjct: 187 -GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+++D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y G + S LR + A YLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+++D V DFG AK + T + GT ++APE + +
Sbjct: 162 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 214
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 62/151 (41%), Gaps = 10/151 (6%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N++R TPT +V Y S G + R+ + + G+ Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 303 QCDPKIIHRDVKAANVLLD--DFCEAIVGDFGLAK-LLDHSDSHVTTAVRGTVGHIAPEY 359
++ HRD+K N LLD + FG +K + HS T GT +IAPE
Sbjct: 134 M---QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV---GTPAYIAPEV 187
Query: 360 LSTGQSSEKT-DVFGFGILLLELITGMRALE 389
L + K DV+ G+ L ++ G E
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 33/208 (15%)
Query: 201 TENFSSKNILGAGGFGNVY--KGKLGDGTVLAVKRLKD------------MISLAV---- 242
++ + LG+G +G V K KL G A+K +K + +AV
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 243 -HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH 301
H N+++L + LV G + + + I G YLH
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 302 EQCDPKIIHRDVKAANVLLD----DFCEAIVGDFGLAKLLDHSDSHVTTAVR-GTVGHIA 356
+ I+HRD+K N+LL+ D IV DFGL+ H + R GT +IA
Sbjct: 122 KH---NIVHRDLKPENLLLESKSRDALIKIV-DFGLSA---HFEVGGKMKERLGTAYYIA 174
Query: 357 PEYLSTGQSSEKTDVFGFGILLLELITG 384
PE L + EK DV+ G++L L+ G
Sbjct: 175 PEVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
G+ +LH IIHRD+K +N+++ C + DFGLA+ S V V T +
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TRYYR 194
Query: 356 APEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
APE + E D++ G ++ E+I G I+Q ++E
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 241
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 368 KTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
D++ G ++ E+I G I+Q ++E
Sbjct: 205 NVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 239
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 41/219 (18%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK----DMISLAVHRN--------------LLRLIG 251
+G+GG V++ + A+K + D +L +RN ++RL
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 252 YCATPTERLLVYPYMSNGSVA--SRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKII 309
Y T +Y M G++ S L++K ++D RK + +H+ I+
Sbjct: 76 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIV 129
Query: 310 HRDVKAANVLLDDFCEAIVGDFGLA-KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEK 368
H D+K AN L+ D ++ DFG+A ++ + S V + GTV ++ PE + SS +
Sbjct: 130 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 188
Query: 369 T-----------DVFGFGILLLELITGMRALEFGKSINQ 396
DV+ G +L + G F + INQ
Sbjct: 189 NGKSKSKISPKSDVWSLGCILYYMTYGKTP--FQQIINQ 225
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 368 KTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
D++ G ++ E+I G I+Q ++E
Sbjct: 206 NVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 240
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+ + + L LH Q +IHRD+K+ ++LL + DFG + V
Sbjct: 121 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 177
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT +APE +S + D++ GI+++E++ G
Sbjct: 178 -GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 368 KTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
D++ G ++ E+I G I+Q ++E
Sbjct: 205 NVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 239
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+ + + L LH Q +IHRD+K+ ++LL + DFG + V
Sbjct: 125 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 181
Query: 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT +APE +S + D++ GI+++E++ G
Sbjct: 182 -GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 368 KTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
D++ G ++ E+I G I+Q ++E
Sbjct: 205 NVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+++D V DFG AK + T + GT ++APE + +
Sbjct: 161 ---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 25/201 (12%)
Query: 202 ENFSSKNILGAGGFGNV-----------YKGKLGDG-TVLAVKRLK-----DMISLAVHR 244
+ F LG G FG V Y K+ D V+ +K+++ I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 245 NLLRLIGYCATPTERL-LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ 303
L + + L +V Y++ G + S LR + A YLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 304 CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG 363
+I+RD+K N+L+D V DFG AK + T + GT ++AP + +
Sbjct: 161 ---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPAIILSK 213
Query: 364 QSSEKTDVFGFGILLLELITG 384
++ D + G+L+ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 62/151 (41%), Gaps = 10/151 (6%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N++R TPT +V Y S G + R+ + + G+ Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 303 QCDPKIIHRDVKAANVLLD--DFCEAIVGDFGLAK-LLDHSDSHVTTAVRGTVGHIAPEY 359
++ HRD+K N LLD + FG +K + HS T GT +IAPE
Sbjct: 134 M---QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV---GTPAYIAPEV 187
Query: 360 LSTGQSSEKT-DVFGFGILLLELITGMRALE 389
L + K DV+ G+ L ++ G E
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 25/142 (17%)
Query: 201 TENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKR--------------LKDMISLAV--- 242
T F +G+G FG+V+K K DG + A+KR L+++ + AV
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTR----KRIAIGAARGLL 298
H +++R A L+ Y + GS+A + E + + K + + RGL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 299 YLHEQCDPKIIHRDVKAANVLL 320
Y+H ++H D+K +N+ +
Sbjct: 128 YIHSMS---LVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 25/142 (17%)
Query: 201 TENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKR--------------LKDMISLAV--- 242
T F +G+G FG+V+K K DG + A+KR L+++ + AV
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTR----KRIAIGAARGLL 298
H +++R A L+ Y + GS+A + E + + K + + RGL
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 299 YLHEQCDPKIIHRDVKAANVLL 320
Y+H ++H D+K +N+ +
Sbjct: 130 YIHSMS---LVHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 25/142 (17%)
Query: 201 TENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKR--------------LKDMISLAV--- 242
T F +G+G FG+V+K K DG + A+KR L+++ + AV
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTR----KRIAIGAARGLL 298
H +++R A L+ Y + GS+A + E + + K + + RGL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 299 YLHEQCDPKIIHRDVKAANVLL 320
Y+H ++H D+K +N+ +
Sbjct: 128 YIHSMS---LVHMDIKPSNIFI 146
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 41/221 (18%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVKRLK--DMISLAV------HRN 245
+E+Q E+F ++G G FG V K+ + + A+K L +M+ A R+
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 246 LLRLIGYCATPT----------ERLLVYPYMSNGSVAS-------RLREKPALDWNTRKR 288
+L + G C T LV Y G + + +L E A +
Sbjct: 127 VL-VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 185
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+AI + L Y +HRD+K NVLLD + DFG ++ + ++
Sbjct: 186 LAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 349 RGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITG 384
GT +I+PE L G+ + D + G+ + E++ G
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 25/142 (17%)
Query: 201 TENFSSKNILGAGGFGNVYKG-KLGDGTVLAVKR--------------LKDMISLAV--- 242
T F +G+G FG+V+K K DG + A+KR L+++ + AV
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTR----KRIAIGAARGLL 298
H +++R A L+ Y + GS+A + E + + K + + RGL
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 299 YLHEQCDPKIIHRDVKAANVLL 320
Y+H ++H D+K +N+ +
Sbjct: 126 YIHSMS---LVHMDIKPSNIFI 144
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYYRAPEVILGMGYKE 204
Query: 368 KTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
D++ G ++ E+I G I+Q ++E
Sbjct: 205 NVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 239
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 41/221 (18%)
Query: 195 RELQQATENFSSKNILGAGGFGNVYKGKLGDGT-VLAVKRLK--DMISLAV------HRN 245
+E+Q E+F ++G G FG V K+ + + A+K L +M+ A R+
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 246 LLRLIGYCATPT----------ERLLVYPYMSNGSVAS-------RLREKPALDWNTRKR 288
+L + G C T LV Y G + + +L E A +
Sbjct: 143 VL-VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 201
Query: 289 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348
+AI + L Y +HRD+K NVLLD + DFG ++ + ++
Sbjct: 202 LAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 349 RGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITG 384
GT +I+PE L G+ + D + G+ + E++ G
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ + + T T + APE + +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMTPYVVTRYYRAPEVILGMGYAA 204
Query: 368 KTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
D++ G ++ EL+ G + I+Q ++E
Sbjct: 205 NVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIE 239
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 28/209 (13%)
Query: 198 QQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKR-LKD---------MISLAVHRNLL 247
+Q +++ ++G G FG V++ KL + +A+K+ L+D ++ + H N++
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVV 95
Query: 248 RLIGYCATPTERL------LVYPYMSNGSV-ASR--LREKPALDWNTRKRIAIGAARGLL 298
L + + ++ LV Y+ ASR + K + K R L
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 299 YLHEQCDPKIIHRDVKAANVLLDDFCEAI-VGDFGLAKLLDHSDSHVTTAVRGTVGHIAP 357
Y+H I HRD+K N+LLD + + DFG AK+L + +V+ + + AP
Sbjct: 156 YIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYRAP 210
Query: 358 EYLSTGQSSEKT--DVFGFGILLLELITG 384
E L G ++ T D++ G ++ EL+ G
Sbjct: 211 E-LIFGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 31/221 (14%)
Query: 184 ISLGNLRNFTFRELQQATENFSSKNILGAGGF-----------GNVYKGKLGDGTVLAVK 232
+ LG N F+ + Q E LG G F G Y K+ + L+ +
Sbjct: 11 VDLGT-ENLYFQSMYQLFEE------LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSAR 63
Query: 233 ------RLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTR 286
R + L H N++RL + L++ ++ G + + +
Sbjct: 64 DHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA 123
Query: 287 KRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSH 343
+L+ H+ ++HRD+K N+LL + + DFGLA ++ +
Sbjct: 124 SHCIQQILEAVLHCHQM---GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQ 179
Query: 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
GT G+++PE L + D++ G++L L+ G
Sbjct: 180 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 35/216 (16%)
Query: 210 LGAGGFGNVYKGKLGDGTVLAVKRLK----DMISLAVHRNLLRLIGYCATPTERLL---- 261
+G+GG V++ + A+K + D +L +RN + + +++++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 262 -------VYPYMSNGSVA--SRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRD 312
+Y M G++ S L++K ++D RK + +H+ I+H D
Sbjct: 124 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSD 180
Query: 313 VKAANVLLDDFCEAIVGDFGLA-KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKT-- 369
+K AN L+ D ++ DFG+A ++ + S V + G V ++ PE + SS +
Sbjct: 181 LKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGK 239
Query: 370 ---------DVFGFGILLLELITGMRALEFGKSINQ 396
DV+ G +L + G F + INQ
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYG--KTPFQQIINQ 273
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 87/214 (40%), Gaps = 22/214 (10%)
Query: 202 ENFSSKNILGAGGFGNVYKGKLGDG-TVLAVKRLK----------------DMISLAVHR 244
+ + +G G +G V+K K + ++A+KR++ ++ H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC 304
N++RL + + LV+ + LD K +GL + H +
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR- 120
Query: 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
++HRD+K N+L++ E + DFGLA+ +A T+ + P+ L +
Sbjct: 121 --NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGAK 177
Query: 365 -SSEKTDVFGFGILLLELITGMRALEFGKSINQK 397
S D++ G + EL R L G ++ +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQ 211
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 287 KRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL------DDFCEAIVGDFGLAKLLDHS 340
K+I+ GL Y+H +C IIH D+K NVL+ ++ + + D G A
Sbjct: 134 KQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--- 188
Query: 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
D H T +++ T + +PE L D++ L+ ELITG
Sbjct: 189 DEHYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 287 KRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL------DDFCEAIVGDFGLAKLLDHS 340
K+I+ GL Y+H +C IIH D+K NVL+ ++ + + D G A
Sbjct: 134 KQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--- 188
Query: 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
D H T +++ T + +PE L D++ L+ ELITG
Sbjct: 189 DEHYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ +H N++ L T+ +L+ +S G + L +K +L
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI----VGDFGLAKLLDHSDSHVTT 346
G+ YLH + KI H D+K N++L D I + DFGLA ++ D
Sbjct: 122 KQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEFK 176
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ H N++ L T+ +L+ ++ G + L EK +L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTT 346
G+ YLH +I H D+K N++L D + DFGLA +D +
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--K 175
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N++ L T+ +L+ ++ G + L EK +L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH- 131
Query: 303 QCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+I H D+K N++L D + DFGLA +D + + GT +APE
Sbjct: 132 --SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPAFVAPE 187
Query: 359 YLSTGQSSEKTDVFGFGILLLELITG 384
++ + D++ G++ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ +H N++ L T+ +L+ +S G + L +K +L
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI----VGDFGLAKLLDHSDSHVTT 346
G+ YLH + KI H D+K N++L D I + DFGLA ++ D
Sbjct: 122 KQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEFK 176
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ +H N++ L T+ +L+ +S G + L +K +L
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI----VGDFGLAKLLDHSDSHVTT 346
G+ YLH + KI H D+K N++L D I + DFGLA ++ D
Sbjct: 122 KQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEFK 176
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ +H N++ L T+ +L+ +S G + L +K +L
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI----VGDFGLAKLLDHSDSHVTT 346
G+ YLH + KI H D+K N++L D I + DFGLA ++ D
Sbjct: 122 KQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEFK 176
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ H N++ L T+ +L+ ++ G + L EK +L
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 119
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTT 346
G+ YLH +I H D+K N++L D + DFGLA +D +
Sbjct: 120 KQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--K 174
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ +H N++ L T+ +L+ +S G + L +K +L
Sbjct: 62 IEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI 121
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAI----VGDFGLAKLLDHSDSHVTT 346
G+ YLH + KI H D+K N++L D I + DFGLA ++ D
Sbjct: 122 KQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--DGVEFK 176
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 308 IIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
I+HRD+K N+LL + + DFGLA + D GT G+++PE L
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 365 SSEKTDVFGFGILLLELITG 384
+ D++ G++L L+ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ H N++ L T+ +L+ ++ G + L EK +L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTT 346
G+ YLH +I H D+K N++L D + DFGLA +D +
Sbjct: 121 KQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--K 175
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ H N++ L T+ +L+ ++ G + L EK +L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTT 346
G+ YLH +I H D+K N++L D + DFGLA +D +
Sbjct: 121 KQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--K 175
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG--LLYLHEQCDPKIIHRDVKAAN 317
L+V + G + SR++++ + R+ I + G + YLH I HRDVK N
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 161
Query: 318 VLL-DDFCEAIVG--DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+L AI+ DFG AK +S T T ++APE L + + D++
Sbjct: 162 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 375 GILLLELITG 384
G+++ L+ G
Sbjct: 220 GVIMYILLCG 229
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ H N++ L T+ +L+ ++ G + L EK +L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTT 346
G+ YLH +I H D+K N++L D + DFGLA +D +
Sbjct: 121 KQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--K 175
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ H N++ L T+ +L+ ++ G + L EK +L
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 119
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTT 346
G+ YLH +I H D+K N++L D + DFGLA +D +
Sbjct: 120 KQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--K 174
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ H N++ L T+ +L+ ++ G + L EK +L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTT 346
G+ YLH +I H D+K N++L D + DFGLA +D +
Sbjct: 121 KQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--K 175
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
G+ +LH IIHRD+K +N+++ + DFGLA+ S + T T +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 356 APEYLSTGQSSEKTDVFGFGILLLELITG 384
APE + E D++ G+++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ H N++ L T+ +L+ ++ G + L EK +L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTT 346
G+ YLH +I H D+K N++L D + DFGLA +D +
Sbjct: 121 KQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--K 175
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 193 TFRELQQATENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK---------------- 235
TFR+ + +++ LG+G F V K + G G A K +K
Sbjct: 4 TFRQ-EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEI 62
Query: 236 ----DMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAI 291
+++ H N++ L T+ +L+ +S G + L EK +L + +
Sbjct: 63 EREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK 122
Query: 292 GAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTTA 347
G+ YLH + +I H D+K N++L D + DFG+A ++ +
Sbjct: 123 QILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KN 177
Query: 348 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
G+ +LH IIHRD+K +N+++ + DFGLA+ S + T T +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 356 APEYLSTGQSSEKTDVFGFGILLLELITG 384
APE + E D++ G+++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 308 IIHRDVKAANVLLDDFCEAI---VGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364
I+HRD+K N+LL + + DFGLA + D GT G+++PE L
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 365 SSEKTDVFGFGILLLELITG 384
+ D++ G++L L+ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 49/235 (20%)
Query: 199 QATENFSSKNILGAGGFGNVYKGKLGDGTV-LAVKRLKDMISLAVH-RNLLR-------- 248
+ +N+ K+++G G +G VY + +A+K++ M + + +LR
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 249 -----------LIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGL 297
+I + L + +++ + + L K I G
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGE 144
Query: 298 LYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAV-------- 348
++HE IIHRD+K AN LL+ C + DFGLA+ ++ D H+ +
Sbjct: 145 KFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEE 201
Query: 349 ---------RGTVGHI------APEYLSTGQS-SEKTDVFGFGILLLELITGMRA 387
+ H+ APE + ++ + D++ G + EL+ M++
Sbjct: 202 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ H N++ L T+ +L+ ++ G + L EK +L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTT 346
G+ YLH +I H D+K N++L D + DFGLA +D +
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--K 175
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG--LLYLHEQCDPKIIHRDVKAAN 317
L+V + G + SR++++ + R+ I + G + YLH I HRDVK N
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 153
Query: 318 VLL-DDFCEAIVG--DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+L AI+ DFG AK +S T T ++APE L + + D++
Sbjct: 154 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 375 GILLLELITG 384
G+++ L+ G
Sbjct: 212 GVIMYILLCG 221
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 231 VKRLKDMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIA 290
++R ++ H N++ L T+ +L+ ++ G + L EK +L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 291 IGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTT 346
G+ YLH +I H D+K N++L D + DFGLA +D +
Sbjct: 121 KQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--K 175
Query: 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 384
+ GT +APE ++ + D++ G++ L++G
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG--LLYLHEQCDPKIIHRDVKAAN 317
L+V + G + SR++++ + R+ I + G + YLH I HRDVK N
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 152
Query: 318 VLL-DDFCEAIVG--DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+L AI+ DFG AK +S T T ++APE L + + D++
Sbjct: 153 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 210
Query: 375 GILLLELITG 384
G+++ L+ G
Sbjct: 211 GVIMYILLCG 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG--LLYLHEQCDPKIIHRDVKAAN 317
L+V + G + SR++++ + R+ I + G + YLH I HRDVK N
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 151
Query: 318 VLL-DDFCEAIVG--DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+L AI+ DFG AK +S T T ++APE L + + D++
Sbjct: 152 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 209
Query: 375 GILLLELITG 384
G+++ L+ G
Sbjct: 210 GVIMYILLCG 219
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAI----GAARGLLYLHEQCDPKIIHRDVKA 315
L++ M G + SR++E+ + R+ I G A L+ H I HRDVK
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH-----NIAHRDVKP 156
Query: 316 ANVLLDDFCEAIV---GDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 372
N+L + V DFG AK + + + + T T ++APE L + + D++
Sbjct: 157 ENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMW 213
Query: 373 GFGILLLELITGM 385
G+++ L+ G
Sbjct: 214 SLGVIMYILLCGF 226
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N++ L T+ +L+ ++ G + L EK +L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH- 131
Query: 303 QCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+I H D+K N++L D + DFGLA +D + + GT +APE
Sbjct: 132 --SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
Query: 359 YLSTGQSSEKTDVFGFGILLLELITG 384
++ + D++ G++ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG--LLYLHEQCDPKIIHRDVKAAN 317
L+V + G + SR++++ + R+ I + G + YLH I HRDVK N
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 197
Query: 318 VLL-DDFCEAIVG--DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+L AI+ DFG AK +S T T ++APE L + + D++
Sbjct: 198 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 375 GILLLELITG 384
G+++ L+ G
Sbjct: 256 GVIMYILLCG 265
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG--LLYLHEQCDPKIIHRDVKAAN 317
L+V + G + SR++++ + R+ I + G + YLH I HRDVK N
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 191
Query: 318 VLL-DDFCEAIVG--DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+L AI+ DFG AK +S T T ++APE L + + D++
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 375 GILLLELITG 384
G+++ L+ G
Sbjct: 250 GVIMYILLCG 259
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG--LLYLHEQCDPKIIHRDVKAAN 317
L+V + G + SR++++ + R+ I + G + YLH I HRDVK N
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 146
Query: 318 VLL-DDFCEAIVG--DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+L AI+ DFG AK +S T T ++APE L + + D++
Sbjct: 147 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 204
Query: 375 GILLLELITG 384
G+++ L+ G
Sbjct: 205 GVIMYILLCG 214
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG--LLYLHEQCDPKIIHRDVKAAN 317
L+V + G + SR++++ + R+ I + G + YLH I HRDVK N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 145
Query: 318 VLL-DDFCEAIVG--DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+L AI+ DFG AK +S T T ++APE L + + D++
Sbjct: 146 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 375 GILLLELITG 384
G+++ L+ G
Sbjct: 204 GVIMYILLCG 213
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 368 KTDVFGFGILLLELI 382
D++ G ++ E++
Sbjct: 206 NVDIWSVGCIMGEMV 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 368 KTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
D++ G ++ E++ I+Q ++E
Sbjct: 199 NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 233
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 368 KTDVFGFGILLLELI 382
D++ G ++ E++
Sbjct: 198 NVDIWSVGCIMGEMV 212
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 296 GLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHI 355
G+ +LH IIHRD+K +N+++ C + DFGLA+ S + T T +
Sbjct: 176 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 230
Query: 356 APEYLSTGQSSEKTDVFGFGILLLELI 382
APE + E D++ G ++ E++
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 112/289 (38%), Gaps = 74/289 (25%)
Query: 210 LGAGGFGNVYKG---KLGD-----GTVLAVKRLKD--------------MISLAVHRNLL 247
LG G F ++KG ++GD T + +K L M+S H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 248 RLIGYCATPTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDP 306
G C E +LV ++ GS+ + L++ K ++ + +A A + +L E
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN--- 132
Query: 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV------RGTVGHIAPEYL 360
+IH +V A N+LL + G+ KL SD ++ V + + + PE +
Sbjct: 133 TLIHGNVCAKNILLIREEDRKTGNPPFIKL---SDPGISITVLPKDILQERIPWVPPECI 189
Query: 361 STGQS-SEKTDVFGFGILLLELITG----------MRALEFGKSINQKGAMLEWXXXXXX 409
++ + TD + FG L E+ +G R L+F + +Q A
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAP--------- 240
Query: 410 XXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRML 458
+ E+ + C Y P HRP ++R L
Sbjct: 241 -------------------KAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAI----GAARGLLYLHEQCDPKIIHRDVKA 315
L++ M G + SR++E+ + R+ I G A L+ H I HRDVK
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH-----NIAHRDVKP 137
Query: 316 ANVLLDDFCEAIV---GDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 372
N+L + V DFG AK + + + + T T ++APE L + + D++
Sbjct: 138 ENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMW 194
Query: 373 GFGILLLELITGM 385
G+++ L+ G
Sbjct: 195 SLGVIMYILLCGF 207
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE 302
H N++ L T+ +L+ ++ G + L EK +L G+ YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH- 131
Query: 303 QCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358
+I H D+K N++L D + DFGLA +D + + GT +APE
Sbjct: 132 --SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPE 187
Query: 359 YLSTGQSSEKTDVFGFGILLLELITG 384
++ + D++ G++ L++G
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG--LLYLHEQCDPKIIHRDVKAAN 317
L+V + G + SR++++ + R+ I + G + YLH I HRDVK N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 147
Query: 318 VLL-DDFCEAIVG--DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+L AI+ DFG AK +S T T ++APE L + + D++
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 375 GILLLELITG 384
G+++ L+ G
Sbjct: 206 GVIMYILLCG 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 368 KTDVFGFGILLLELI 382
D++ G ++ E++
Sbjct: 199 NVDIWSVGCIMGEMV 213
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 368 KTDVFGFGILLLELI 382
D++ G ++ E++
Sbjct: 205 NVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 368 KTDVFGFGILLLELI 382
D++ G ++ E++
Sbjct: 243 NVDIWSVGCIMGEMV 257
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 203
Query: 368 KTDVFGFGILLLELI 382
D++ G ++ E++
Sbjct: 204 NVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 368 KTDVFGFGILLLELI 382
D++ G ++ E++
Sbjct: 205 NVDIWSVGCIMGEMV 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARG--LLYLHEQCDPKIIHRDVKAAN 317
L+V + G + SR++++ + R+ I + G + YLH I HRDVK N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 147
Query: 318 VLL-DDFCEAIVG--DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGF 374
+L AI+ DFG AK +S T T ++APE L + + D++
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 375 GILLLELITG 384
G+++ L+ G
Sbjct: 206 GVIMYILLCG 215
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 308 IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSE 367
IIHRD+K +N+++ C + DFGLA+ S + T T + APE + E
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 368 KTDVFGFGILLLELI 382
D++ G ++ E++
Sbjct: 206 NVDIWSVGCIMGEMV 220
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 36/200 (18%)
Query: 210 LGAGGFGNV-----------YKGKL----GDGTVLAVKRLKDMISLAVHRNLLRLIGYCA 254
LG G FG V Y K G VL VK+ ++++A HRN+L L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL-VKKEISILNIARHRNILHLHESFE 71
Query: 255 TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDP-------K 307
+ E ++++ ++S + R+ A + N R+ ++ Y+H+ C+
Sbjct: 72 SMEELVMIFEFISGLDIFERI-NTSAFELNEREIVS--------YVHQVCEALQFLHSHN 122
Query: 308 IIHRDVKAANVLLDDFCEAIVG--DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQS 365
I H D++ N++ + + +FG A+ L D+ + + APE
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF--RLLFTAPEYYAPEVHQHDVV 180
Query: 366 SEKTDVFGFGILLLELITGM 385
S TD++ G L+ L++G+
Sbjct: 181 STATDMWSLGTLVYVLLSGI 200
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 30/217 (13%)
Query: 210 LGAGGFGNVYKG--KLGDGTVLAVKRLK----------------DMISLAVHRNLLRLIG 251
LG G +G VYK + + TV A+KR++ ++ HRN++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETV-AIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 252 YCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHR 311
L++ Y N + + + P + K G+ + H + + +HR
Sbjct: 101 VIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHR 156
Query: 312 DVKAANVLL--DDFCEAIV---GDFGLAKLLDHSDSHVTTAVRGTVGHIAPEY-LSTGQS 365
D+K N+LL D E V GDFGLA+ T + T+ + PE L +
Sbjct: 157 DLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI-ITLWYRPPEILLGSRHY 215
Query: 366 SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE 402
S D++ + E++ I+Q + E
Sbjct: 216 STSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFE 252
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,933,974
Number of Sequences: 62578
Number of extensions: 585776
Number of successful extensions: 3811
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 377
Number of HSP's that attempted gapping in prelim test: 1649
Number of HSP's gapped (non-prelim): 1385
length of query: 534
length of database: 14,973,337
effective HSP length: 103
effective length of query: 431
effective length of database: 8,527,803
effective search space: 3675483093
effective search space used: 3675483093
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)