Query 039819
Match_columns 534
No_of_seqs 596 out of 3967
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 23:31:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039819.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039819hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g3f_A NF-kappa-beta-inducing 100.0 4.9E-54 1.7E-58 432.6 21.1 259 202-483 58-331 (336)
2 4gt4_A Tyrosine-protein kinase 100.0 2.2E-54 7.5E-59 432.4 15.4 239 203-461 27-304 (308)
3 4asz_A BDNF/NT-3 growth factor 100.0 1.8E-54 6E-59 431.2 13.0 239 202-460 13-286 (299)
4 4aoj_A High affinity nerve gro 100.0 9E-54 3.1E-58 431.9 17.6 239 202-460 41-316 (329)
5 3omv_A RAF proto-oncogene seri 100.0 4E-53 1.4E-57 421.8 19.8 241 202-460 36-297 (307)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 3E-52 1E-56 414.8 19.7 233 202-455 32-283 (311)
7 4fih_A Serine/threonine-protei 100.0 6.3E-52 2.1E-56 418.5 21.4 235 202-456 74-323 (346)
8 3hmm_A TGF-beta receptor type- 100.0 1.5E-52 5E-57 419.5 15.5 251 203-460 4-294 (303)
9 3fpq_A Serine/threonine-protei 100.0 3.7E-52 1.3E-56 411.8 16.7 232 205-456 29-282 (290)
10 4b9d_A Serine/threonine-protei 100.0 6.2E-52 2.1E-56 419.2 15.9 234 202-456 24-276 (350)
11 3ubd_A Ribosomal protein S6 ki 100.0 1.2E-51 4.2E-56 410.2 17.2 228 202-451 24-271 (304)
12 4fie_A Serine/threonine-protei 100.0 1.1E-50 3.7E-55 419.4 21.6 235 202-456 151-400 (423)
13 4ase_A Vascular endothelial gr 100.0 9E-52 3.1E-56 420.7 13.1 242 200-460 62-344 (353)
14 3hyh_A Carbon catabolite-derep 100.0 7.2E-51 2.5E-55 399.3 18.8 231 202-456 13-262 (275)
15 3uim_A Brassinosteroid insensi 100.0 8.6E-49 2.9E-53 396.3 19.6 286 184-469 12-317 (326)
16 4g31_A Eukaryotic translation 100.0 3.7E-48 1.3E-52 386.1 18.8 231 201-456 4-279 (299)
17 4b99_A Mitogen-activated prote 100.0 2.9E-48 1E-52 401.4 18.7 250 202-456 54-344 (398)
18 4f9c_A Cell division cycle 7-r 100.0 2E-47 6.8E-52 390.9 18.0 188 199-392 18-251 (361)
19 3v5w_A G-protein coupled recep 100.0 1.1E-46 3.8E-51 406.5 19.4 230 201-451 188-439 (689)
20 2qkw_B Protein kinase; three-h 100.0 1.1E-45 3.7E-50 373.0 21.3 266 191-460 28-312 (321)
21 3uto_A Twitchin; kinase, muscl 100.0 1.2E-45 4.3E-50 399.6 19.1 237 201-456 156-410 (573)
22 3fe3_A MAP/microtubule affinit 100.0 3.1E-43 1.1E-47 356.3 22.5 233 201-456 14-264 (328)
23 2nru_A Interleukin-1 receptor- 100.0 1.5E-42 5.1E-47 347.4 26.4 264 188-460 11-303 (307)
24 4aw2_A Serine/threonine-protei 100.0 2.4E-43 8.1E-48 370.0 19.8 248 193-456 65-338 (437)
25 3zgw_A Maternal embryonic leuc 100.0 3.3E-43 1.1E-47 358.6 18.6 235 201-456 9-260 (347)
26 3s95_A LIMK-1, LIM domain kina 100.0 1.8E-43 6.1E-48 354.8 16.2 240 202-461 10-280 (310)
27 3soc_A Activin receptor type-2 100.0 1E-43 3.6E-48 358.8 14.3 252 202-460 24-315 (322)
28 3v8s_A RHO-associated protein 100.0 8.6E-43 2.9E-47 363.0 21.1 245 195-457 62-330 (410)
29 3fxz_A Serine/threonine-protei 100.0 2.3E-42 8E-47 344.9 23.2 236 201-456 19-269 (297)
30 3p86_A Serine/threonine-protei 100.0 3.7E-43 1.3E-47 352.8 16.9 239 201-460 36-295 (309)
31 2psq_A Fibroblast growth facto 100.0 4.6E-43 1.6E-47 361.1 17.9 240 201-460 80-361 (370)
32 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.4E-43 1.5E-47 344.2 16.6 242 201-462 7-263 (268)
33 2c30_A Serine/threonine-protei 100.0 4.6E-42 1.6E-46 346.7 24.3 247 190-456 23-294 (321)
34 4dc2_A Protein kinase C IOTA t 100.0 3.3E-42 1.1E-46 356.7 23.5 237 201-451 51-307 (396)
35 3tki_A Serine/threonine-protei 100.0 1.2E-42 4.2E-47 351.2 19.5 238 201-456 6-261 (323)
36 3q4u_A Activin receptor type-1 100.0 1.2E-42 4E-47 346.8 18.1 248 201-460 7-299 (301)
37 4eqm_A Protein kinase; transfe 100.0 3.1E-42 1.1E-46 343.5 20.9 244 202-461 11-273 (294)
38 2vd5_A DMPK protein; serine/th 100.0 9.2E-43 3.1E-47 363.0 17.5 247 193-456 52-327 (412)
39 3niz_A Rhodanese family protei 100.0 1E-42 3.5E-47 349.9 17.1 251 201-456 20-300 (311)
40 1o6l_A RAC-beta serine/threoni 100.0 1E-41 3.4E-46 346.4 24.4 234 202-457 5-261 (337)
41 4euu_A Serine/threonine-protei 100.0 1.1E-41 3.7E-46 343.3 24.5 254 202-461 9-307 (319)
42 4hcu_A Tyrosine-protein kinase 100.0 5.3E-43 1.8E-47 344.0 14.3 239 202-460 10-263 (269)
43 3kul_A Ephrin type-A receptor 100.0 9.9E-43 3.4E-47 352.2 16.6 239 202-460 49-310 (325)
44 2yab_A Death-associated protei 100.0 7.6E-42 2.6E-46 350.4 23.1 237 201-456 11-272 (361)
45 3cbl_A C-FES, proto-oncogene t 100.0 5.5E-43 1.9E-47 361.4 14.4 241 201-461 113-372 (377)
46 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.1E-42 1E-46 352.4 18.7 234 201-456 22-280 (353)
47 3kn6_A Ribosomal protein S6 ki 100.0 1.9E-42 6.6E-47 350.1 16.9 239 207-456 16-270 (325)
48 3gen_A Tyrosine-protein kinase 100.0 9.7E-43 3.3E-47 344.6 14.4 240 201-460 23-277 (283)
49 1fot_A TPK1 delta, CAMP-depend 100.0 2.9E-41 1E-45 340.3 24.9 230 202-456 6-258 (318)
50 2pmi_A Negative RE, cyclin-dep 100.0 3.2E-42 1.1E-46 347.2 17.4 251 201-456 4-293 (317)
51 1qcf_A Haematopoetic cell kina 100.0 9.6E-43 3.3E-47 368.4 13.8 240 201-461 187-442 (454)
52 2qol_A Ephrin receptor; recept 100.0 1.3E-42 4.6E-47 357.9 14.5 240 202-461 45-307 (373)
53 3vhe_A Vascular endothelial gr 100.0 5.8E-43 2E-47 358.2 11.6 249 193-460 13-352 (359)
54 4fr4_A YANK1, serine/threonine 100.0 1.1E-41 3.6E-46 351.7 20.9 235 202-456 15-271 (384)
55 2y0a_A Death-associated protei 100.0 2.4E-41 8.2E-46 342.2 22.9 237 201-456 10-271 (326)
56 3o0g_A Cell division protein k 100.0 5.9E-42 2E-46 340.8 17.9 249 202-456 2-282 (292)
57 3oz6_A Mitogen-activated prote 100.0 2.3E-42 7.9E-47 358.1 15.6 263 199-485 6-339 (388)
58 2r5t_A Serine/threonine-protei 100.0 4E-42 1.4E-46 354.0 17.2 237 202-460 38-293 (373)
59 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.5E-41 1.6E-45 343.4 24.8 230 202-456 41-293 (350)
60 3p1a_A MYT1 kinase, membrane-a 100.0 2.9E-42 9.8E-47 346.5 15.3 230 201-456 56-304 (311)
61 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.3E-42 1.8E-46 348.2 17.4 231 202-456 9-258 (336)
62 3op5_A Serine/threonine-protei 100.0 4E-42 1.4E-46 353.2 16.7 249 201-460 34-326 (364)
63 1opk_A P150, C-ABL, proto-onco 100.0 1.8E-42 6.2E-47 370.1 14.5 241 201-461 219-476 (495)
64 1ob3_A PFPK5, cell division co 100.0 5E-42 1.7E-46 340.7 16.7 247 202-456 2-280 (288)
65 2izr_A Casein kinase I isoform 100.0 2.2E-41 7.6E-46 342.8 21.8 244 202-460 9-278 (330)
66 3kex_A Receptor tyrosine-prote 100.0 4E-42 1.4E-46 347.6 15.9 240 202-462 13-275 (325)
67 3tt0_A Basic fibroblast growth 100.0 5E-42 1.7E-46 354.8 17.0 240 202-461 69-350 (382)
68 2w4o_A Calcium/calmodulin-depe 100.0 3E-41 1E-45 344.7 21.6 238 201-456 52-305 (349)
69 1xjd_A Protein kinase C, theta 100.0 7.9E-42 2.7E-46 348.1 17.1 235 199-455 14-268 (345)
70 3poz_A Epidermal growth factor 100.0 4.9E-42 1.7E-46 347.3 15.4 239 202-461 15-276 (327)
71 3g33_A Cell division protein k 100.0 1.1E-41 3.6E-46 341.6 17.6 251 200-456 7-296 (308)
72 1vzo_A Ribosomal protein S6 ki 100.0 1.9E-41 6.3E-46 347.1 19.6 241 201-458 53-323 (355)
73 1csn_A Casein kinase-1; phosph 100.0 2.6E-41 8.9E-46 336.5 20.0 245 202-460 10-280 (298)
74 2bdw_A Hypothetical protein K1 100.0 2.7E-41 9.4E-46 346.7 20.7 239 199-456 26-284 (362)
75 3a8x_A Protein kinase C IOTA t 100.0 2.7E-41 9.2E-46 344.5 20.4 236 202-451 9-264 (345)
76 3soa_A Calcium/calmodulin-depe 100.0 4E-41 1.4E-45 354.1 22.2 240 199-456 8-267 (444)
77 3ugc_A Tyrosine-protein kinase 100.0 4.7E-42 1.6E-46 341.9 14.3 246 202-460 10-288 (295)
78 3dtc_A Mitogen-activated prote 100.0 9.6E-42 3.3E-46 335.1 16.1 238 202-460 7-270 (271)
79 1tki_A Titin; serine kinase, m 100.0 3.1E-41 1.1E-45 340.6 20.1 237 201-456 4-257 (321)
80 3l9p_A Anaplastic lymphoma kin 100.0 2.1E-42 7.2E-47 355.7 11.7 240 202-461 71-343 (367)
81 2i0e_A Protein kinase C-beta I 100.0 2.8E-41 9.4E-46 345.2 19.8 229 201-451 19-266 (353)
82 3mtl_A Cell division protein k 100.0 2.2E-41 7.6E-46 342.0 18.8 249 202-456 2-281 (324)
83 1mp8_A Focal adhesion kinase 1 100.0 6.5E-42 2.2E-46 338.6 14.6 240 201-461 14-274 (281)
84 1luf_A Muscle-specific tyrosin 100.0 5.4E-42 1.9E-46 348.6 14.4 242 200-461 45-333 (343)
85 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.3E-42 1.8E-46 362.5 14.8 240 201-461 183-438 (452)
86 2ivs_A Proto-oncogene tyrosine 100.0 9.2E-42 3.2E-46 342.4 15.8 241 201-461 22-309 (314)
87 1k9a_A Carboxyl-terminal SRC k 100.0 1.5E-41 5.3E-46 358.7 18.2 235 201-460 192-442 (450)
88 1rjb_A FL cytokine receptor; k 100.0 1.1E-41 3.8E-46 346.7 16.4 242 201-461 44-332 (344)
89 3llt_A Serine/threonine kinase 100.0 1.2E-41 3.9E-46 348.9 16.6 260 189-456 22-355 (360)
90 4ejn_A RAC-alpha serine/threon 100.0 4.4E-41 1.5E-45 354.9 21.5 234 201-456 147-404 (446)
91 3fdn_A Serine/threonine-protei 100.0 1.5E-41 5.3E-46 335.4 16.7 232 201-456 8-257 (279)
92 3lb7_A RAF proto-oncogene seri 100.0 4.9E-41 1.7E-45 337.0 20.4 241 202-460 36-297 (307)
93 1kob_A Twitchin; kinase, intra 100.0 5.2E-41 1.8E-45 347.3 21.1 237 201-456 50-304 (387)
94 4agu_A Cyclin-dependent kinase 100.0 1.6E-41 5.4E-46 340.5 16.6 252 201-456 2-284 (311)
95 3mdy_A Bone morphogenetic prot 100.0 6.5E-41 2.2E-45 339.6 21.3 254 198-460 33-328 (337)
96 3t9t_A Tyrosine-protein kinase 100.0 7.9E-42 2.7E-46 334.8 13.7 239 202-460 8-261 (267)
97 1qpc_A LCK kinase; alpha beta 100.0 1.5E-41 5.2E-46 335.3 15.8 239 201-460 12-266 (279)
98 1t46_A HOMO sapiens V-KIT hard 100.0 1.3E-41 4.3E-46 341.2 15.4 240 202-460 23-304 (313)
99 3qd2_B Eukaryotic translation 100.0 2.3E-41 7.9E-46 341.8 17.3 235 200-456 4-325 (332)
100 3uc3_A Serine/threonine-protei 100.0 2.5E-41 8.5E-46 346.9 17.8 239 201-456 19-274 (361)
101 3a62_A Ribosomal protein S6 ki 100.0 2.7E-41 9.1E-46 342.0 17.5 233 202-456 17-276 (327)
102 3dbq_A Dual specificity protei 100.0 6.7E-42 2.3E-46 348.7 13.1 235 202-456 9-273 (343)
103 1nxk_A MAP kinase-activated pr 100.0 4.5E-41 1.6E-45 349.7 19.6 240 202-456 61-321 (400)
104 2qr7_A Ribosomal protein S6 ki 100.0 2.2E-41 7.6E-46 344.7 16.9 242 200-456 20-277 (342)
105 2v62_A Serine/threonine-protei 100.0 2.3E-41 7.9E-46 345.0 17.0 250 202-462 37-327 (345)
106 2acx_A G protein-coupled recep 100.0 3.9E-41 1.3E-45 362.1 19.5 237 201-456 183-444 (576)
107 3gni_B Strad alpha; kinase fol 100.0 5.1E-41 1.7E-45 348.0 19.7 253 201-456 24-333 (389)
108 3kfa_A Tyrosine-protein kinase 100.0 1E-41 3.5E-46 337.9 13.8 242 201-462 12-270 (288)
109 3kmu_A ILK, integrin-linked ki 100.0 3.3E-41 1.1E-45 330.7 16.6 233 202-460 10-267 (271)
110 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.3E-40 4.3E-45 342.1 21.6 235 201-460 64-336 (365)
111 3dls_A PAS domain-containing s 100.0 7.9E-41 2.7E-45 339.7 19.8 229 200-457 22-275 (335)
112 2zv2_A Calcium/calmodulin-depe 100.0 7.3E-41 2.5E-45 333.9 19.1 234 202-456 13-292 (298)
113 3c0i_A Peripheral plasma membr 100.0 1.5E-40 5E-45 339.9 21.5 237 201-456 23-286 (351)
114 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.9E-41 6.6E-46 343.2 14.8 248 201-456 33-318 (329)
115 2pvf_A Fibroblast growth facto 100.0 3.4E-41 1.2E-45 342.0 16.6 241 201-461 34-316 (334)
116 3g2f_A Bone morphogenetic prot 100.0 4.5E-41 1.5E-45 341.0 17.3 255 201-461 12-316 (336)
117 3ork_A Serine/threonine protei 100.0 2.5E-41 8.6E-46 339.5 15.3 238 202-456 12-273 (311)
118 3ttj_A Mitogen-activated prote 100.0 3.3E-41 1.1E-45 357.2 17.0 248 201-456 61-355 (464)
119 2h34_A Serine/threonine-protei 100.0 1.5E-40 5E-45 333.7 20.6 243 201-461 33-294 (309)
120 4eut_A Serine/threonine-protei 100.0 7.8E-41 2.7E-45 347.6 19.2 251 202-460 9-306 (396)
121 3n9x_A Phosphotransferase; mal 100.0 3E-40 1E-44 347.1 23.7 184 201-388 25-252 (432)
122 2a2a_A Death-associated protei 100.0 2.3E-40 8E-45 334.0 22.0 237 201-456 11-272 (321)
123 3lxp_A Non-receptor tyrosine-p 100.0 2.8E-41 9.6E-46 340.3 15.1 251 204-460 33-307 (318)
124 4f0f_A Serine/threonine-protei 100.0 7.3E-41 2.5E-45 331.8 17.8 236 202-460 19-286 (287)
125 2zmd_A Dual specificity protei 100.0 1.8E-41 6.3E-46 351.5 13.9 235 202-456 56-320 (390)
126 4hgt_A Casein kinase I isoform 100.0 3.8E-40 1.3E-44 327.6 22.7 247 200-460 7-277 (296)
127 2y94_A 5'-AMP-activated protei 100.0 1.4E-40 4.6E-45 352.6 20.6 232 202-456 16-266 (476)
128 4e7w_A Glycogen synthase kinas 100.0 3.6E-41 1.2E-45 349.8 15.8 250 202-456 40-321 (394)
129 4e5w_A Tyrosine-protein kinase 100.0 9.3E-41 3.2E-45 333.4 18.2 246 202-460 21-299 (302)
130 3qup_A Tyrosine-protein kinase 100.0 2.9E-41 1E-45 340.6 14.6 240 201-460 22-295 (323)
131 2yex_A Serine/threonine-protei 100.0 1.5E-40 5E-45 327.3 18.9 239 200-456 5-261 (276)
132 3rp9_A Mitogen-activated prote 100.0 3.5E-40 1.2E-44 349.3 22.8 178 202-383 53-279 (458)
133 2eue_A Carbon catabolite derep 100.0 1.3E-40 4.4E-45 328.1 18.1 231 202-456 13-262 (275)
134 3gxj_A TGF-beta receptor type- 100.0 1.1E-42 3.8E-47 347.1 3.4 249 202-462 3-296 (303)
135 4fvq_A Tyrosine-protein kinase 100.0 6.4E-41 2.2E-45 332.4 15.8 235 202-462 8-274 (289)
136 3cok_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45 327.8 18.3 234 201-456 10-262 (278)
137 3kk8_A Calcium/calmodulin depe 100.0 4E-40 1.4E-44 325.8 21.2 237 201-456 5-261 (284)
138 2h8h_A Proto-oncogene tyrosine 100.0 1.8E-41 6E-46 365.7 12.3 240 201-461 266-521 (535)
139 3lxl_A Tyrosine-protein kinase 100.0 2E-41 7E-46 342.5 12.0 248 202-462 23-302 (327)
140 3uzp_A CKI-delta, CKID, casein 100.0 4.2E-40 1.4E-44 327.5 21.2 246 201-460 8-277 (296)
141 3lm5_A Serine/threonine-protei 100.0 1.7E-40 5.8E-45 336.0 18.6 244 194-456 20-287 (327)
142 3cc6_A Protein tyrosine kinase 100.0 5.6E-41 1.9E-45 331.7 14.6 240 201-461 11-271 (281)
143 2xir_A Vascular endothelial gr 100.0 3E-41 1E-45 338.9 12.9 248 195-461 20-308 (316)
144 3hko_A Calcium/calmodulin-depe 100.0 3.2E-40 1.1E-44 335.9 20.6 243 197-456 21-330 (345)
145 3e3p_A Protein kinase, putativ 100.0 7.4E-41 2.5E-45 342.7 15.9 256 195-456 16-314 (360)
146 2ac3_A MAP kinase-interacting 100.0 2.8E-40 9.7E-45 332.1 19.9 241 202-456 12-295 (316)
147 1ua2_A CAK, cell division prot 100.0 1.7E-40 5.8E-45 338.7 18.3 250 199-456 7-291 (346)
148 2eva_A TAK1 kinase - TAB1 chim 100.0 6.7E-41 2.3E-45 335.9 15.0 238 202-461 8-261 (307)
149 3i6u_A CDS1, serine/threonine- 100.0 3.2E-40 1.1E-44 345.4 20.8 239 199-456 132-399 (419)
150 2rku_A Serine/threonine-protei 100.0 2.4E-40 8.3E-45 329.3 18.9 233 202-456 15-265 (294)
151 1mqb_A Ephrin type-A receptor 100.0 8.3E-41 2.9E-45 339.2 15.8 240 202-461 44-307 (333)
152 1xbb_A Tyrosine-protein kinase 100.0 3.9E-41 1.3E-45 334.7 12.9 240 201-461 15-277 (291)
153 2jii_A Serine/threonine-protei 100.0 1E-40 3.6E-45 341.0 16.1 248 202-460 42-333 (352)
154 1b6c_B TGF-B superfamily recep 100.0 7.1E-40 2.4E-44 332.8 22.1 252 198-461 38-334 (342)
155 2a19_B Interferon-induced, dou 100.0 1.7E-40 5.8E-45 328.1 16.9 235 200-461 9-272 (284)
156 1p4o_A Insulin-like growth fac 100.0 2.8E-41 9.5E-46 340.5 11.4 246 196-461 19-297 (322)
157 1cm8_A Phosphorylated MAP kina 100.0 1.3E-40 4.3E-45 342.5 16.5 245 202-456 25-307 (367)
158 3kvw_A DYRK2, dual specificity 100.0 1.2E-40 4E-45 349.8 16.5 184 202-393 97-304 (429)
159 3og7_A AKAP9-BRAF fusion prote 100.0 2E-40 7E-45 329.3 17.4 242 202-461 24-286 (289)
160 1j1b_A Glycogen synthase kinas 100.0 4.1E-40 1.4E-44 344.8 20.4 246 202-456 54-336 (420)
161 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.1E-40 1.7E-44 352.4 21.5 233 202-452 185-439 (543)
162 2i1m_A Macrophage colony-stimu 100.0 6.8E-41 2.3E-45 339.4 13.8 242 201-461 45-324 (333)
163 2owb_A Serine/threonine-protei 100.0 2.9E-40 9.8E-45 335.5 18.4 233 202-456 41-291 (335)
164 3eb0_A Putative uncharacterize 100.0 8.6E-41 2.9E-45 345.7 14.8 253 198-456 3-321 (383)
165 4aaa_A Cyclin-dependent kinase 100.0 2.2E-40 7.5E-45 335.6 17.4 263 201-467 24-319 (331)
166 3is5_A Calcium-dependent prote 100.0 5.6E-40 1.9E-44 325.5 20.0 235 201-456 21-278 (285)
167 1x8b_A WEE1HU, WEE1-like prote 100.0 1.5E-40 5.2E-45 328.7 15.7 229 200-456 9-279 (289)
168 3lzb_A Epidermal growth factor 100.0 1.2E-40 4.2E-45 337.1 15.4 239 202-461 15-276 (327)
169 3f3z_A Calcium/calmodulin-depe 100.0 9.5E-40 3.3E-44 322.0 21.2 232 201-456 8-261 (277)
170 1u59_A Tyrosine-protein kinase 100.0 1.4E-40 4.8E-45 330.0 15.1 239 202-461 9-270 (287)
171 2x4f_A Myosin light chain kina 100.0 4.5E-40 1.5E-44 339.0 19.3 231 207-456 94-342 (373)
172 1u5q_A Serine/threonine protei 100.0 1.3E-40 4.6E-45 339.7 15.1 231 201-456 53-305 (348)
173 4fl3_A Tyrosine-protein kinase 100.0 1.3E-40 4.4E-45 365.3 16.0 232 208-460 375-628 (635)
174 2buj_A Serine/threonine-protei 100.0 1.4E-40 4.7E-45 334.6 14.9 243 202-462 29-305 (317)
175 2vgo_A Serine/threonine-protei 100.0 4.4E-40 1.5E-44 325.8 18.2 231 202-456 14-262 (284)
176 3pls_A Macrophage-stimulating 100.0 3.1E-40 1.1E-44 328.8 16.9 238 204-460 23-284 (298)
177 3c1x_A Hepatocyte growth facto 100.0 1.3E-40 4.6E-45 342.9 14.4 238 203-460 90-352 (373)
178 1byg_A CSK, protein (C-termina 100.0 1.3E-40 4.4E-45 328.6 13.6 235 201-460 20-270 (278)
179 3pg1_A Mitogen-activated prote 100.0 1.6E-40 5.3E-45 340.8 14.4 258 193-456 13-316 (362)
180 3pfq_A PKC-B, PKC-beta, protei 100.0 6.3E-40 2.1E-44 362.2 20.3 230 200-451 339-587 (674)
181 2y7j_A Phosphorylase B kinase 100.0 2.2E-39 7.5E-44 333.0 22.9 244 194-456 86-359 (365)
182 3bhy_A Death-associated protei 100.0 1.1E-39 3.8E-44 322.5 20.0 237 201-456 4-265 (283)
183 2ozo_A Tyrosine-protein kinase 100.0 1.6E-40 5.6E-45 363.4 15.4 231 209-460 343-595 (613)
184 3byv_A Rhoptry kinase; malaria 100.0 8.9E-41 3E-45 344.9 12.5 224 202-456 73-359 (377)
185 2r3i_A Cell division protein k 100.0 4.3E-40 1.5E-44 328.1 16.9 247 202-456 3-283 (299)
186 3nsz_A CK II alpha, casein kin 100.0 1.3E-39 4.6E-44 329.3 20.7 245 202-456 36-319 (330)
187 2wqm_A Serine/threonine-protei 100.0 7.3E-40 2.5E-44 328.4 18.6 244 201-462 31-296 (310)
188 3f66_A Hepatocyte growth facto 100.0 3.2E-40 1.1E-44 328.9 15.9 239 202-460 25-288 (298)
189 3eqc_A Dual specificity mitoge 100.0 1.2E-40 4E-45 341.6 12.9 250 202-456 33-324 (360)
190 1fvr_A Tyrosine-protein kinase 100.0 2.5E-40 8.7E-45 334.5 15.0 237 202-460 25-297 (327)
191 3fme_A Dual specificity mitoge 100.0 2.6E-40 8.7E-45 328.0 14.7 236 201-456 6-266 (290)
192 3brb_A Proto-oncogene tyrosine 100.0 2.7E-40 9.4E-45 331.9 14.9 240 201-460 33-305 (313)
193 1t4h_A Serine/threonine-protei 100.0 6.6E-40 2.3E-44 325.5 17.3 231 204-456 28-282 (290)
194 2h6d_A 5'-AMP-activated protei 100.0 1.4E-39 4.7E-44 320.6 19.4 232 202-456 11-261 (276)
195 1blx_A Cyclin-dependent kinase 100.0 6.2E-40 2.1E-44 331.0 17.3 251 200-456 9-296 (326)
196 2fst_X Mitogen-activated prote 100.0 6.4E-40 2.2E-44 337.1 17.4 245 202-456 29-311 (367)
197 3qyz_A Mitogen-activated prote 100.0 2.3E-39 7.9E-44 332.6 21.4 250 201-456 26-313 (364)
198 3ll6_A Cyclin G-associated kin 100.0 2.9E-40 1E-44 334.4 14.4 236 202-461 28-306 (337)
199 3mwu_A Calmodulin-domain prote 100.0 2.7E-39 9.2E-44 345.0 22.3 237 200-456 20-276 (486)
200 2jam_A Calcium/calmodulin-depe 100.0 1.5E-39 5.1E-44 325.3 19.0 236 201-456 8-261 (304)
201 2w5a_A Serine/threonine-protei 100.0 8.7E-41 3E-45 329.7 9.6 239 201-460 5-271 (279)
202 1wak_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 337.2 19.2 248 202-456 37-391 (397)
203 3mi9_A Cell division protein k 100.0 5.9E-40 2E-44 335.1 15.9 251 202-456 17-311 (351)
204 2yfx_A Tyrosine-protein kinase 100.0 3.2E-40 1.1E-44 333.8 13.7 241 201-461 29-302 (327)
205 2w1i_A JAK2; chromosomal rearr 100.0 7.5E-40 2.6E-44 331.0 16.3 246 202-460 41-319 (326)
206 2b9h_A MAP kinase FUS3, mitoge 100.0 3.1E-40 1E-44 337.2 13.5 251 201-456 10-305 (353)
207 3lij_A Calcium/calmodulin depe 100.0 3.1E-39 1.1E-43 345.2 21.6 236 201-456 36-291 (494)
208 3an0_A Dual specificity mitoge 100.0 4.2E-40 1.4E-44 334.7 14.0 236 201-456 50-310 (340)
209 3sv0_A Casein kinase I-like; t 100.0 2.5E-39 8.5E-44 343.5 20.4 245 202-460 7-275 (483)
210 2xrw_A Mitogen-activated prote 100.0 1.2E-39 4.1E-44 335.7 17.2 247 202-456 25-318 (371)
211 3nyv_A Calmodulin-domain prote 100.0 1.8E-39 6E-44 346.3 19.1 236 201-456 25-281 (484)
212 4exu_A Mitogen-activated prote 100.0 4.8E-39 1.6E-43 331.2 21.6 245 202-456 42-323 (371)
213 2wtk_C Serine/threonine-protei 100.0 8E-39 2.7E-43 319.8 22.4 234 201-456 4-263 (305)
214 2vwi_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44 325.4 16.0 243 201-456 14-287 (303)
215 3a7i_A MST3 kinase, serine/thr 100.0 1.4E-39 4.7E-44 325.3 16.5 233 202-456 22-270 (303)
216 2vx3_A Dual specificity tyrosi 100.0 8.1E-39 2.8E-43 330.8 22.3 187 200-392 52-262 (382)
217 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.1E-39 1.7E-43 323.3 20.2 240 201-462 32-301 (319)
218 3q60_A ROP5B; pseudokinase, tr 100.0 5.8E-40 2E-44 338.0 13.6 238 202-456 62-352 (371)
219 3com_A Serine/threonine-protei 100.0 7E-39 2.4E-43 321.7 21.0 238 200-456 27-278 (314)
220 2j7t_A Serine/threonine-protei 100.0 2.1E-39 7.3E-44 323.5 17.0 237 201-456 18-275 (302)
221 1z57_A Dual specificity protei 100.0 3.1E-39 1.1E-43 327.0 17.9 247 202-456 14-328 (339)
222 3fhr_A MAP kinase-activated pr 100.0 1.4E-39 4.6E-44 330.7 15.2 240 201-456 27-287 (336)
223 2ycf_A Serine/threonine-protei 100.0 5.6E-39 1.9E-43 323.9 19.5 238 200-456 8-274 (322)
224 3rgf_A Cyclin-dependent kinase 100.0 4.1E-39 1.4E-43 335.6 18.8 186 202-391 20-239 (405)
225 3q5i_A Protein kinase; CDPK, m 100.0 9.5E-39 3.3E-43 342.3 22.2 236 201-456 35-301 (504)
226 2clq_A Mitogen-activated prote 100.0 2.5E-39 8.6E-44 321.7 16.3 235 203-456 23-278 (295)
227 2x7f_A TRAF2 and NCK-interacti 100.0 5.1E-40 1.7E-44 331.8 11.4 245 192-456 14-286 (326)
228 1u46_A ACK-1, activated CDC42 100.0 7E-40 2.4E-44 325.1 12.0 240 202-461 18-282 (291)
229 3coi_A Mitogen-activated prote 100.0 4.8E-39 1.6E-43 328.8 18.4 244 202-456 24-305 (353)
230 1phk_A Phosphorylase kinase; g 100.0 6.8E-39 2.3E-43 319.2 18.3 237 201-456 16-283 (298)
231 2pml_X PFPK7, Ser/Thr protein 100.0 9E-39 3.1E-43 325.6 19.5 242 201-456 30-322 (348)
232 2iwi_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43 323.9 15.8 229 198-456 27-283 (312)
233 3cek_A Dual specificity protei 100.0 1.8E-39 6.2E-44 326.1 13.4 236 201-456 27-292 (313)
234 1q8y_A SR protein kinase; tran 100.0 1.1E-38 3.8E-43 328.0 19.2 248 202-456 19-333 (373)
235 3aln_A Dual specificity mitoge 100.0 3.1E-39 1.1E-43 326.4 14.7 238 202-456 22-285 (327)
236 2j0j_A Focal adhesion kinase 1 100.0 2.4E-39 8.1E-44 356.5 14.5 240 201-461 389-649 (656)
237 1zy4_A Serine/threonine-protei 100.0 1.7E-38 5.7E-43 316.4 18.5 238 200-456 4-283 (303)
238 3a99_A Proto-oncogene serine/t 100.0 1.4E-38 4.7E-43 321.0 16.8 227 200-456 41-293 (320)
239 2wei_A Calmodulin-domain prote 100.0 4.5E-38 1.5E-42 311.9 19.7 237 200-456 20-276 (287)
240 2i6l_A Mitogen-activated prote 100.0 1.4E-38 4.8E-43 319.7 14.9 247 202-456 11-305 (320)
241 2dyl_A Dual specificity mitoge 100.0 4.6E-38 1.6E-42 316.0 18.3 236 201-456 24-283 (318)
242 2eu9_A Dual specificity protei 100.0 3.7E-38 1.3E-42 321.3 17.6 247 202-456 19-333 (355)
243 2rio_A Serine/threonine-protei 100.0 2.5E-38 8.7E-43 332.5 16.8 236 204-456 17-295 (434)
244 3p23_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 331.4 15.5 236 202-456 24-283 (432)
245 2pzi_A Probable serine/threoni 100.0 6.1E-37 2.1E-41 339.8 18.7 223 202-460 80-325 (681)
246 3qa8_A MGC80376 protein; kinas 100.0 1.2E-37 4E-42 338.5 10.9 243 201-454 13-295 (676)
247 3m2w_A MAP kinase-activated pr 100.0 6.4E-36 2.2E-40 298.4 18.4 215 202-456 17-256 (299)
248 3uqc_A Probable conserved tran 100.0 1.2E-35 4.2E-40 294.7 17.6 213 202-461 31-263 (286)
249 2vuw_A Serine/threonine-protei 100.0 9.1E-37 3.1E-41 309.7 9.6 228 201-455 19-329 (336)
250 3dzo_A Rhoptry kinase domain; 100.0 2.9E-36 1E-40 314.8 11.0 224 202-456 78-363 (413)
251 4azs_A Methyltransferase WBDD; 100.0 8.6E-30 2.9E-34 275.6 3.4 171 210-388 242-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 7.8E-27 2.7E-31 251.0 6.2 170 205-388 339-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 1E-22 3.5E-27 201.0 7.5 138 195-361 83-252 (282)
254 2v9t_B SLIT homolog 2 protein 99.8 4E-19 1.4E-23 168.8 12.1 131 8-152 32-167 (220)
255 3e6j_A Variable lymphocyte rec 99.8 9E-19 3.1E-23 167.3 11.7 131 8-153 40-175 (229)
256 2v70_A SLIT-2, SLIT homolog 2 99.8 1.4E-18 4.8E-23 164.9 11.3 131 9-153 33-169 (220)
257 3rgz_A Protein brassinosteroid 99.8 5.7E-19 1.9E-23 198.3 9.1 134 13-161 613-750 (768)
258 1ogq_A PGIP-2, polygalacturona 99.8 5.2E-19 1.8E-23 177.2 7.7 135 1-149 40-186 (313)
259 1zth_A RIO1 serine protein kin 99.7 2.2E-18 7.6E-23 167.7 8.4 123 204-338 49-220 (258)
260 1ogq_A PGIP-2, polygalacturona 99.7 2.9E-18 9.8E-23 171.8 9.0 151 8-159 125-312 (313)
261 3m19_A Variable lymphocyte rec 99.7 1E-17 3.4E-22 162.3 11.7 145 8-152 35-194 (251)
262 2o6s_A Variable lymphocyte rec 99.7 1.6E-17 5.6E-22 155.9 11.7 132 8-153 28-164 (208)
263 1w8a_A SLIT protein; signaling 99.7 5.3E-17 1.8E-21 150.6 11.4 113 9-135 30-143 (192)
264 4eco_A Uncharacterized protein 99.7 6.9E-18 2.4E-22 185.4 6.3 120 1-135 74-292 (636)
265 1w8a_A SLIT protein; signaling 99.7 2E-17 6.8E-22 153.5 8.5 126 11-153 11-142 (192)
266 1p9a_G Platelet glycoprotein I 99.7 5.6E-17 1.9E-21 160.5 11.6 141 8-152 55-210 (290)
267 3rfs_A Internalin B, repeat mo 99.7 7.8E-17 2.7E-21 157.9 12.1 145 8-154 63-222 (272)
268 2wfh_A SLIT homolog 2 protein 99.7 6.4E-17 2.2E-21 150.2 10.2 125 11-153 13-142 (193)
269 3rgz_A Protein brassinosteroid 99.7 4.4E-17 1.5E-21 182.9 9.3 142 8-149 490-692 (768)
270 3m19_A Variable lymphocyte rec 99.7 2.1E-16 7.2E-21 152.9 12.2 115 1-134 9-123 (251)
271 2o6q_A Variable lymphocyte rec 99.7 1.9E-16 6.4E-21 155.0 11.9 146 8-153 61-221 (270)
272 4gyi_A RIO2 kinase; protein ki 99.7 3E-17 1E-21 166.8 5.7 126 204-338 97-266 (397)
273 4ecn_A Leucine-rich repeat pro 99.7 3.1E-17 1.1E-21 184.6 5.8 121 1-135 316-534 (876)
274 2xot_A Amphoterin-induced prot 99.7 1.2E-16 4E-21 163.3 8.4 145 8-152 39-204 (361)
275 2v70_A SLIT-2, SLIT homolog 2 99.7 1.6E-16 5.6E-21 150.6 8.7 114 8-135 57-170 (220)
276 1ozn_A Reticulon 4 receptor; N 99.6 1.9E-16 6.4E-21 156.1 8.9 146 8-153 80-241 (285)
277 3v47_A TOLL-like receptor 5B a 99.6 3.8E-16 1.3E-20 164.2 11.5 133 8-154 275-412 (455)
278 2z66_A Variable lymphocyte rec 99.6 3.7E-16 1.3E-20 155.5 10.8 130 9-152 127-263 (306)
279 2o6r_A Variable lymphocyte rec 99.6 3.5E-16 1.2E-20 142.9 9.4 125 11-152 10-139 (177)
280 4g8a_A TOLL-like receptor 4; l 99.6 3.3E-16 1.1E-20 171.1 10.8 128 8-149 52-185 (635)
281 2wfh_A SLIT homolog 2 protein 99.6 5.2E-16 1.8E-20 144.0 9.7 111 8-133 31-141 (193)
282 2o6r_A Variable lymphocyte rec 99.6 9.8E-16 3.3E-20 139.9 10.9 114 8-135 28-141 (177)
283 2v9t_B SLIT homolog 2 protein 99.6 8.8E-16 3E-20 145.5 9.8 111 8-132 56-166 (220)
284 3g39_A Variable lymphocyte rec 99.6 9.1E-16 3.1E-20 139.3 9.4 109 10-135 11-119 (170)
285 4g8a_A TOLL-like receptor 4; l 99.6 9.7E-16 3.3E-20 167.4 10.9 132 8-153 445-583 (635)
286 2je0_A Acidic leucine-rich nuc 99.6 7.4E-16 2.5E-20 136.4 7.2 113 7-135 16-130 (149)
287 2xot_A Amphoterin-induced prot 99.6 1.6E-15 5.6E-20 154.8 10.4 108 11-135 21-129 (361)
288 3zyi_A Leucine-rich repeat-con 99.6 2.8E-15 9.7E-20 157.7 12.5 65 9-73 76-140 (452)
289 3vq2_A TLR4, TOLL-like recepto 99.6 1.1E-15 3.9E-20 166.6 9.3 131 9-154 425-562 (606)
290 2r9u_A Variable lymphocyte rec 99.6 2.6E-15 8.9E-20 136.9 9.9 108 11-135 15-122 (174)
291 4fcg_A Uncharacterized protein 99.6 1.2E-15 4E-20 153.8 8.1 115 8-138 150-273 (328)
292 2o6s_A Variable lymphocyte rec 99.6 3.7E-15 1.3E-19 139.7 10.4 115 8-136 52-166 (208)
293 3oja_A Leucine-rich immune mol 99.6 1.1E-15 3.8E-20 162.3 6.9 128 8-153 120-253 (487)
294 2z62_A TOLL-like receptor 4, v 99.6 6.4E-15 2.2E-19 144.4 11.7 73 8-80 52-124 (276)
295 2ell_A Acidic leucine-rich nuc 99.6 2.7E-15 9.1E-20 135.7 8.1 113 7-135 23-137 (168)
296 3zyj_A Leucine-rich repeat-con 99.6 5.6E-15 1.9E-19 154.9 11.5 144 8-153 136-295 (440)
297 1ozn_A Reticulon 4 receptor; N 99.6 7.9E-15 2.7E-19 144.4 11.8 128 8-149 32-165 (285)
298 3e6j_A Variable lymphocyte rec 99.6 6.1E-15 2.1E-19 140.6 10.5 114 7-135 63-176 (229)
299 2z62_A TOLL-like receptor 4, v 99.6 6.1E-15 2.1E-19 144.5 10.8 111 8-132 28-138 (276)
300 3rfs_A Internalin B, repeat mo 99.6 6.6E-15 2.2E-19 144.1 10.6 129 8-136 85-223 (272)
301 4fcg_A Uncharacterized protein 99.6 2.5E-15 8.6E-20 151.3 7.5 125 8-149 127-265 (328)
302 2o6q_A Variable lymphocyte rec 99.6 1E-14 3.5E-19 142.5 11.6 112 8-133 37-148 (270)
303 1p9a_G Platelet glycoprotein I 99.6 1.4E-14 4.8E-19 143.3 11.9 125 8-149 31-160 (290)
304 4eco_A Uncharacterized protein 99.6 2.9E-15 9.8E-20 164.5 7.5 127 8-150 206-366 (636)
305 3vq2_A TLR4, TOLL-like recepto 99.5 9.2E-15 3.1E-19 159.4 10.7 143 8-150 32-194 (606)
306 2id5_A Lingo-1, leucine rich r 99.5 1E-14 3.5E-19 154.4 9.8 128 8-149 32-164 (477)
307 3t6q_A CD180 antigen; protein- 99.5 1.4E-14 4.9E-19 157.8 11.1 111 8-132 33-143 (606)
308 1dce_A Protein (RAB geranylger 99.5 6.6E-15 2.2E-19 159.0 8.0 109 9-136 442-551 (567)
309 3t6q_A CD180 antigen; protein- 99.5 6.7E-15 2.3E-19 160.5 7.8 144 8-152 400-562 (606)
310 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 1.6E-14 5.5E-19 156.2 10.3 144 7-152 352-512 (562)
311 2z63_A TOLL-like receptor 4, v 99.5 1.4E-14 4.6E-19 156.7 9.6 145 8-153 373-534 (570)
312 2z7x_B TOLL-like receptor 1, v 99.5 1.3E-14 4.6E-19 155.2 8.9 144 7-152 323-483 (520)
313 3v47_A TOLL-like receptor 5B a 99.5 2.1E-14 7.1E-19 150.9 9.2 115 8-136 299-413 (455)
314 1wwl_A Monocyte differentiatio 99.5 2E-14 6.8E-19 143.6 8.0 142 8-150 95-266 (312)
315 3oja_B Anopheles plasmodium-re 99.5 4.2E-14 1.4E-18 154.1 10.9 124 9-132 52-185 (597)
316 3zyi_A Leucine-rich repeat-con 99.5 4.1E-14 1.4E-18 148.8 10.4 107 10-133 56-162 (452)
317 2z66_A Variable lymphocyte rec 99.5 2.4E-14 8.2E-19 142.4 8.1 125 8-133 78-214 (306)
318 4ezg_A Putative uncharacterize 99.5 4.9E-14 1.7E-18 131.0 9.1 103 9-129 45-147 (197)
319 3zyj_A Leucine-rich repeat-con 99.5 7.6E-14 2.6E-18 146.2 11.6 139 9-149 89-243 (440)
320 1ziw_A TOLL-like receptor 3; i 99.5 2.4E-14 8.2E-19 158.3 8.1 145 9-153 455-625 (680)
321 4b8c_D Glucose-repressible alc 99.5 1.3E-14 4.4E-19 161.4 5.7 113 8-138 224-336 (727)
322 3o53_A Protein LRIM1, AGAP0063 99.5 1.9E-14 6.5E-19 144.1 6.3 139 9-152 100-252 (317)
323 2xwt_C Thyrotropin receptor; s 99.5 1.9E-14 6.5E-19 137.9 5.8 124 8-131 31-169 (239)
324 2ell_A Acidic leucine-rich nuc 99.5 2.4E-14 8.1E-19 129.4 6.0 112 8-136 49-164 (168)
325 1ziw_A TOLL-like receptor 3; i 99.5 4E-14 1.4E-18 156.5 9.1 115 8-136 25-139 (680)
326 2z63_A TOLL-like receptor 4, v 99.5 7.7E-14 2.6E-18 150.7 10.7 129 8-136 28-167 (570)
327 1xku_A Decorin; proteoglycan, 99.5 1.1E-13 3.9E-18 139.1 10.7 107 8-131 145-253 (330)
328 2z81_A CD282 antigen, TOLL-lik 99.5 4.6E-14 1.6E-18 151.9 8.2 109 8-130 26-135 (549)
329 1wwl_A Monocyte differentiatio 99.5 2.2E-14 7.6E-19 143.3 5.2 140 8-149 121-286 (312)
330 2ifg_A High affinity nerve gro 99.5 6.5E-14 2.2E-18 141.9 8.7 105 12-133 12-118 (347)
331 2id5_A Lingo-1, leucine rich r 99.5 4.9E-14 1.7E-18 149.1 8.0 113 8-134 56-168 (477)
332 3o6n_A APL1; leucine-rich repe 99.5 1.3E-13 4.4E-18 142.0 10.9 128 8-149 45-177 (390)
333 3g39_A Variable lymphocyte rec 99.5 1.5E-13 5.2E-18 124.6 9.8 104 33-153 10-118 (170)
334 4ecn_A Leucine-rich repeat pro 99.5 4.7E-14 1.6E-18 158.8 7.5 131 8-149 448-607 (876)
335 4ezg_A Putative uncharacterize 99.5 8.7E-14 3E-18 129.3 7.9 124 8-149 66-193 (197)
336 4glp_A Monocyte differentiatio 99.5 4.9E-14 1.7E-18 140.6 6.5 141 8-149 117-284 (310)
337 2z80_A TOLL-like receptor 2, v 99.4 8.9E-14 3E-18 141.3 8.1 126 9-149 53-186 (353)
338 3j0a_A TOLL-like receptor 5; m 99.4 1E-13 3.4E-18 157.2 9.4 143 7-149 23-186 (844)
339 1a9n_A U2A', U2A'; complex (nu 99.4 2E-13 7E-18 124.3 9.6 110 7-136 18-130 (176)
340 3oja_B Anopheles plasmodium-re 99.4 1.3E-13 4.3E-18 150.3 9.5 107 30-136 49-165 (597)
341 2ft3_A Biglycan; proteoglycan, 99.4 3.6E-13 1.2E-17 135.5 11.9 64 9-73 55-118 (332)
342 2je0_A Acidic leucine-rich nuc 99.4 4.5E-14 1.5E-18 124.9 4.5 105 7-127 41-149 (149)
343 2r9u_A Variable lymphocyte rec 99.4 2.6E-13 8.9E-18 123.5 9.7 103 34-153 14-121 (174)
344 2z80_A TOLL-like receptor 2, v 99.4 7.1E-14 2.4E-18 142.0 5.5 126 8-148 76-209 (353)
345 2ft3_A Biglycan; proteoglycan, 99.4 3.4E-13 1.2E-17 135.7 10.5 120 9-131 34-160 (332)
346 4glp_A Monocyte differentiatio 99.4 1.4E-13 4.8E-18 137.2 7.4 141 9-150 92-264 (310)
347 3o6n_A APL1; leucine-rich repe 99.4 2.4E-13 8.3E-18 139.9 9.3 128 8-149 69-198 (390)
348 2xwt_C Thyrotropin receptor; s 99.4 1.2E-13 4E-18 132.4 6.2 140 8-150 55-218 (239)
349 3oja_A Leucine-rich immune mol 99.4 1.7E-13 5.7E-18 145.6 7.1 121 9-136 35-162 (487)
350 1xku_A Decorin; proteoglycan, 99.4 7.7E-13 2.6E-17 132.9 11.4 126 8-150 121-253 (330)
351 4b8c_D Glucose-repressible alc 99.4 2.4E-13 8.1E-18 151.2 8.2 110 23-150 215-329 (727)
352 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 3.2E-13 1.1E-17 145.9 9.0 108 8-132 52-160 (562)
353 2z81_A CD282 antigen, TOLL-lik 99.4 1.2E-13 3.9E-18 148.8 5.2 118 8-139 50-169 (549)
354 2z7x_B TOLL-like receptor 1, v 99.4 1.3E-13 4.4E-18 147.5 5.4 108 8-132 21-129 (520)
355 1a9n_A U2A', U2A'; complex (nu 99.4 1.8E-13 6.2E-18 124.7 5.2 104 9-131 43-153 (176)
356 1xeu_A Internalin C; cellular 99.4 1.3E-12 4.3E-17 127.2 10.0 135 8-152 41-187 (263)
357 1h6t_A Internalin B; cell adhe 99.3 1.7E-12 5.8E-17 128.3 9.9 117 9-133 47-171 (291)
358 2ifg_A High affinity nerve gro 99.3 1.2E-12 4E-17 132.6 8.6 102 35-152 11-118 (347)
359 3j0a_A TOLL-like receptor 5; m 99.3 1.9E-12 6.5E-17 146.7 9.8 127 8-149 266-393 (844)
360 1h6u_A Internalin H; cell adhe 99.3 1.4E-12 4.6E-17 130.1 7.6 136 8-151 85-231 (308)
361 1xeu_A Internalin C; cellular 99.3 2.3E-12 7.9E-17 125.4 8.5 134 9-151 20-164 (263)
362 1ds9_A Outer arm dynein; leuci 99.3 7E-15 2.4E-19 136.8 -9.1 127 7-152 17-155 (198)
363 1h6t_A Internalin B; cell adhe 99.3 2.3E-12 7.8E-17 127.3 8.0 135 8-151 68-214 (291)
364 1m9s_A Internalin B; cell inva 99.3 5.2E-12 1.8E-16 137.2 10.9 134 8-150 65-210 (605)
365 1h6u_A Internalin H; cell adhe 99.3 4.2E-12 1.5E-16 126.4 9.3 66 9-80 42-107 (308)
366 1dce_A Protein (RAB geranylger 99.3 2.8E-12 9.6E-17 138.4 8.5 101 8-125 463-567 (567)
367 3o53_A Protein LRIM1, AGAP0063 99.3 5.3E-12 1.8E-16 126.2 9.9 111 9-137 145-257 (317)
368 3cvr_A Invasion plasmid antige 99.3 2.7E-12 9.4E-17 138.1 7.8 100 3-132 55-154 (571)
369 4fmz_A Internalin; leucine ric 99.3 4.4E-12 1.5E-16 128.1 8.9 135 9-149 200-345 (347)
370 3cvr_A Invasion plasmid antige 99.3 4.9E-12 1.7E-16 136.1 8.4 98 8-136 100-197 (571)
371 1m9s_A Internalin B; cell inva 99.2 9E-12 3.1E-16 135.3 8.4 119 8-134 87-213 (605)
372 1o6v_A Internalin A; bacterial 99.2 1.1E-11 3.6E-16 130.9 8.4 136 8-151 243-389 (466)
373 1ds9_A Outer arm dynein; leuci 99.2 5.6E-14 1.9E-18 130.7 -8.7 110 8-136 48-158 (198)
374 1jl5_A Outer protein YOPM; leu 99.2 2.2E-12 7.6E-17 135.6 1.7 136 7-149 10-185 (454)
375 1jl5_A Outer protein YOPM; leu 99.2 4.2E-11 1.4E-15 125.8 11.4 130 9-149 132-269 (454)
376 4fmz_A Internalin; leucine ric 99.2 1.5E-11 5.2E-16 124.2 7.5 116 8-131 221-346 (347)
377 3bz5_A Internalin-J, INLJ; leu 99.2 4.9E-11 1.7E-15 125.5 10.6 100 8-132 42-141 (457)
378 1o6v_A Internalin A; bacterial 99.2 3.7E-11 1.3E-15 126.7 9.2 106 8-135 221-326 (466)
379 4ay9_X Follicle-stimulating ho 99.2 2.3E-11 7.9E-16 123.3 6.3 107 12-135 13-121 (350)
380 3bz5_A Internalin-J, INLJ; leu 99.2 7E-11 2.4E-15 124.2 10.2 104 8-136 148-251 (457)
381 2ca6_A RAN GTPase-activating p 99.1 2.3E-12 7.8E-17 132.5 -1.9 128 8-149 159-315 (386)
382 2ca6_A RAN GTPase-activating p 99.1 5.1E-12 1.7E-16 129.9 0.5 114 8-135 187-320 (386)
383 3tm0_A Aminoglycoside 3'-phosp 99.1 3E-10 1E-14 109.9 11.4 134 196-335 8-212 (263)
384 3goz_A Leucine-rich repeat-con 99.1 2.7E-11 9.3E-16 123.4 3.9 113 13-134 3-125 (362)
385 4ay9_X Follicle-stimulating ho 99.1 7.5E-11 2.6E-15 119.5 6.0 113 8-135 30-145 (350)
386 2ast_B S-phase kinase-associat 99.1 2.6E-11 8.9E-16 121.8 1.3 102 9-128 48-152 (336)
387 3g06_A SSPH2 (leucine-rich rep 99.1 1.4E-10 4.8E-15 126.2 7.1 113 9-149 162-296 (622)
388 2ast_B S-phase kinase-associat 99.0 1.9E-11 6.6E-16 122.8 0.1 110 8-132 70-183 (336)
389 3goz_A Leucine-rich repeat-con 99.0 3.3E-11 1.1E-15 122.8 1.7 115 8-132 22-152 (362)
390 1nd4_A Aminoglycoside 3'-phosp 99.0 4.6E-10 1.6E-14 108.1 9.1 118 211-336 29-214 (264)
391 3g06_A SSPH2 (leucine-rich rep 99.0 2.9E-10 9.9E-15 123.7 8.1 126 8-149 40-173 (622)
392 3dxp_A Putative acyl-COA dehyd 98.8 1.2E-08 4E-13 103.6 11.9 128 206-336 42-248 (359)
393 1z7x_W Ribonuclease inhibitor; 98.8 2.3E-10 8E-15 120.0 -1.4 110 8-131 256-383 (461)
394 1z7x_W Ribonuclease inhibitor; 98.8 7.3E-11 2.5E-15 123.9 -5.5 133 8-149 227-382 (461)
395 3rw6_A Nuclear RNA export fact 98.7 2.1E-09 7.1E-14 103.9 2.1 98 13-124 148-257 (267)
396 3sg8_A APH(2'')-ID; antibiotic 98.7 7.8E-09 2.7E-13 102.4 5.9 174 207-388 25-287 (304)
397 3un9_A NLR family member X1; l 98.7 1.8E-09 6E-14 110.3 0.5 128 8-149 101-251 (372)
398 3un9_A NLR family member X1; l 98.6 5.2E-09 1.8E-13 106.8 -0.5 116 8-132 72-197 (372)
399 3sb4_A Hypothetical leucine ri 98.5 1.1E-07 3.7E-12 95.2 7.2 100 9-124 227-327 (329)
400 3sb4_A Hypothetical leucine ri 98.4 4.4E-07 1.5E-11 90.7 9.2 37 8-45 101-137 (329)
401 3rw6_A Nuclear RNA export fact 98.4 1.2E-07 4E-12 91.6 4.4 65 8-74 170-238 (267)
402 1io0_A Tropomodulin; LRR prote 98.4 2.3E-08 7.9E-13 91.5 -0.6 110 8-131 36-164 (185)
403 3r70_A Aminoglycoside phosphot 98.4 1.8E-06 6.2E-11 85.9 11.7 125 203-337 38-238 (320)
404 3ogk_B Coronatine-insensitive 98.3 3.3E-08 1.1E-12 107.0 -1.9 110 8-131 378-501 (592)
405 3ogk_B Coronatine-insensitive 98.3 1.8E-07 6E-12 101.2 1.8 121 9-131 165-306 (592)
406 3d1u_A Putative fructosamine-3 98.1 2.2E-05 7.4E-10 76.9 11.6 62 206-271 19-97 (288)
407 2ra8_A Uncharacterized protein 98.0 1.4E-06 4.6E-11 88.3 2.7 113 8-132 172-293 (362)
408 2p1m_B Transport inhibitor res 98.0 4.5E-07 1.5E-11 98.0 -2.5 109 8-132 372-495 (594)
409 3ovc_A Hygromycin-B 4-O-kinase 98.0 2.8E-05 9.4E-10 78.8 10.6 132 205-337 44-244 (362)
410 1io0_A Tropomodulin; LRR prote 97.9 1.4E-06 4.9E-11 79.5 0.6 97 22-132 26-137 (185)
411 3tdw_A Gentamicin resistance p 97.9 4.8E-05 1.6E-09 75.1 11.6 125 207-337 24-225 (306)
412 2p1m_B Transport inhibitor res 97.9 1.8E-06 6.2E-11 93.2 -0.0 127 8-149 338-493 (594)
413 4gkh_A Aminoglycoside 3'-phosp 97.8 6.2E-05 2.1E-09 72.5 10.2 124 209-336 31-223 (272)
414 3ats_A Putative uncharacterize 97.8 6.6E-05 2.3E-09 75.6 10.0 66 208-273 26-122 (357)
415 4fdw_A Leucine rich hypothetic 97.8 4.3E-05 1.5E-09 78.5 8.3 69 9-80 227-300 (401)
416 4fdw_A Leucine rich hypothetic 97.6 0.00013 4.5E-09 74.8 8.7 118 10-131 159-284 (401)
417 2pyw_A Uncharacterized protein 97.5 7.4E-05 2.5E-09 77.2 6.1 79 305-384 231-312 (420)
418 2q83_A YTAA protein; 2635576, 97.5 0.00032 1.1E-08 69.7 9.7 31 305-335 221-251 (346)
419 2ra8_A Uncharacterized protein 97.4 8.6E-05 2.9E-09 75.0 4.7 107 8-132 139-266 (362)
420 2olc_A MTR kinase, methylthior 97.3 0.00067 2.3E-08 69.2 10.1 31 306-337 227-257 (397)
421 3rfe_A Platelet glycoprotein I 97.3 0.00025 8.5E-09 60.4 5.3 56 12-69 12-68 (130)
422 3jr1_A Putative fructosamine-3 97.3 0.0015 5.1E-08 64.4 11.3 124 207-332 41-232 (312)
423 3rfe_A Platelet glycoprotein I 97.0 0.0011 3.8E-08 56.3 6.7 57 35-107 11-68 (130)
424 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00014 4.9E-09 66.4 0.6 113 7-129 40-168 (197)
425 3f7w_A Putative fructosamine-3 96.9 0.004 1.4E-07 60.4 10.3 63 204-270 17-96 (288)
426 2ppq_A HSK, HK, homoserine kin 96.8 0.003 1E-07 62.2 9.0 145 190-335 5-216 (322)
427 2yle_A Protein spire homolog 1 96.7 0.0063 2.1E-07 56.0 9.5 97 270-383 34-131 (229)
428 3e4g_A ATP synthase subunit S, 96.6 0.00055 1.9E-08 61.3 1.4 96 24-129 53-150 (176)
429 3dxq_A Choline/ethanolamine ki 96.6 0.0087 3E-07 58.4 10.3 30 306-336 173-202 (301)
430 4gt6_A Cell surface protein; l 96.5 0.0069 2.3E-07 61.6 8.8 38 26-64 259-296 (394)
431 4h09_A Hypothetical leucine ri 96.5 0.0073 2.5E-07 60.9 9.0 86 25-126 233-318 (379)
432 1zyl_A Hypothetical protein YI 96.3 0.013 4.4E-07 57.8 9.4 144 190-336 9-223 (328)
433 3e4g_A ATP synthase subunit S, 96.3 0.00079 2.7E-08 60.3 0.3 86 8-107 61-153 (176)
434 3csv_A Aminoglycoside phosphot 96.2 0.019 6.4E-07 56.8 10.0 33 305-337 182-218 (333)
435 4gt6_A Cell surface protein; l 96.0 0.0082 2.8E-07 61.0 6.7 104 9-130 266-369 (394)
436 2qg7_A Ethanolamine kinase PV0 96.0 0.03 1E-06 58.1 10.7 61 207-271 113-188 (458)
437 4fs7_A Uncharacterized protein 95.9 0.0077 2.6E-07 61.2 5.9 100 9-128 277-376 (394)
438 3i1a_A Spectinomycin phosphotr 95.9 0.038 1.3E-06 54.9 10.5 32 306-337 206-237 (339)
439 1nw1_A Choline kinase (49.2 KD 95.8 0.021 7.1E-07 58.9 8.6 61 207-271 78-159 (429)
440 3c5i_A Choline kinase; choline 95.7 0.025 8.7E-07 56.8 8.8 29 306-335 212-240 (369)
441 1pgv_A TMD-1, tropomodulin TMD 95.7 0.0021 7.4E-08 58.5 0.7 93 28-130 37-138 (197)
442 3feg_A Choline/ethanolamine ki 95.3 0.055 1.9E-06 54.6 9.5 124 208-335 56-253 (379)
443 4fs7_A Uncharacterized protein 95.3 0.038 1.3E-06 56.0 8.2 54 9-64 72-125 (394)
444 4h09_A Hypothetical leucine ri 94.9 0.055 1.9E-06 54.4 8.0 106 8-131 240-345 (379)
445 3mes_A Choline kinase; malaria 89.4 1.3 4.5E-05 45.1 9.7 29 307-336 263-291 (424)
446 4ann_A ESSB; membrane protein, 87.1 2.2 7.5E-05 38.9 8.5 117 241-389 42-158 (215)
447 4ano_A ESSB; membrane protein, 81.0 2.7 9.2E-05 38.5 6.3 116 241-389 47-163 (219)
448 3f2s_A CK, chetk-alpha, cholin 72.8 1.6 5.5E-05 44.1 2.5 29 307-335 245-279 (401)
449 3g15_A CK, chetk-alpha, cholin 66.7 2.8 9.6E-05 42.2 2.8 29 308-336 246-280 (401)
450 2lz0_A Uncharacterized protein 46.8 21 0.00073 27.9 4.3 50 17-67 5-54 (100)
451 3cxl_A N-chimerin; SH2, RHO-GA 38.5 3.1 0.00011 42.8 -2.4 45 207-254 147-214 (463)
No 1
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.9e-54 Score=432.61 Aligned_cols=259 Identities=23% Similarity=0.245 Sum_probs=209.9
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh---------hhhhcccCceeeEEEEEeCCCeeEEEeeccCCCCh
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD---------MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSV 271 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~---------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 271 (534)
+.|...+.||+|+||.||+|+.. +|+.||||+++. +++.++|||||++++++.+.+..|||||||++|+|
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 45777788999999999999975 689999999862 67889999999999999999999999999999999
Q ss_pred hhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC-cEEEEecccceecCCCCCc----eee
Q 039819 272 ASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC-EAIVGDFGLAKLLDHSDSH----VTT 346 (534)
Q Consensus 272 ~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~-~~kl~DFGla~~~~~~~~~----~~~ 346 (534)
.++++..+.+++..+..|+.||+.||+|||++ +||||||||+||||+.++ ++||+|||+|+.+...... ...
T Consensus 138 ~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~ 214 (336)
T 4g3f_A 138 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214 (336)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------C
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCC
Confidence 99999888899999999999999999999999 999999999999999987 6999999999987543211 123
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCC
Q 039819 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYD 426 (534)
Q Consensus 347 ~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 426 (534)
..+||+.|||||++.+..|+.++|||||||++|||+||+.||....... +.. .+...... -..+ +
T Consensus 215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~----~~~---~i~~~~~~----~~~~----~ 279 (336)
T 4g3f_A 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP----LCL---KIASEPPP----IREI----P 279 (336)
T ss_dssp CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC----CHH---HHHHSCCG----GGGS----C
T ss_pred ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH----HHH---HHHcCCCC----chhc----C
Confidence 4679999999999999999999999999999999999999997543221 111 11111100 0111 2
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcCCchhhHHhhccCCCCCCCCccc
Q 039819 427 RIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDGLAEKWAAAHNHTNPTMNNFHT 483 (534)
Q Consensus 427 ~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~p~~~~~~~ 483 (534)
...+..+.+++.+||+.||.+|||+.|+++.|.. ......+..|||+..+..
T Consensus 280 ~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~-----~l~~~~~l~hPw~~~~~~ 331 (336)
T 4g3f_A 280 PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK-----ALQEVGGLKSPWKGEYKE 331 (336)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH-----HHHHTTSSCSCSSSSCCC
T ss_pred ccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH-----HHhhhhhccCCCcCCCCC
Confidence 2234578899999999999999999999998753 334456788999876553
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.2e-54 Score=432.38 Aligned_cols=239 Identities=23% Similarity=0.361 Sum_probs=198.0
Q ss_pred CCCcCCeeccCCcEEEEEEEEC------CCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCeeEE
Q 039819 203 NFSSKNILGAGGFGNVYKGKLG------DGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 203 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
+++..+.||+|+||+||+|++. +++.||||+++. ++++++|||||+++|+|.+.+..+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3455678999999999999873 467899999852 6788999999999999999999999
Q ss_pred EeeccCCCChhhhcccC----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCc
Q 039819 262 VYPYMSNGSVASRLREK----------------PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCE 325 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~ 325 (534)
|||||++|+|.++|... ..++|..+++|+.|||+||+|||++ +||||||||+||||++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 99999999999999532 3599999999999999999999999 9999999999999999999
Q ss_pred EEEEecccceecCCCC-CceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHH
Q 039819 326 AIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEW 403 (534)
Q Consensus 326 ~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 403 (534)
+||+|||+|+...... ........||+.|||||++.++.|+.++|||||||++|||+| |+.||..... .+.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-------~~~ 256 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------QDV 256 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-------HHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-------HHH
Confidence 9999999998764332 223345679999999999999999999999999999999999 8999974321 122
Q ss_pred HHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 404 VKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 404 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
+..+..... ...+..++..+.+++.+||+.+|++||||.||++.|+..
T Consensus 257 ~~~i~~~~~----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 257 VEMIRNRQV----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHcCCC----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 222222111 112233456899999999999999999999999999853
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.8e-54 Score=431.24 Aligned_cols=239 Identities=26% Similarity=0.425 Sum_probs=197.5
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC------CCcEEEEEEehh--------------hhhhcccCceeeEEEEEeCCCeeEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG------DGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~--------------~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
++|...+.||+|+||.||+|++. ++..||||+++. ++++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46777889999999999999874 478899999862 6888999999999999999999999
Q ss_pred EeeccCCCChhhhcccC-------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEE
Q 039819 262 VYPYMSNGSVASRLREK-------------PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIV 328 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~-------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl 328 (534)
|||||++|+|.++++.. ..++|.+++.|+.|||+||.|||++ +||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 99999999999999643 3699999999999999999999998 9999999999999999999999
Q ss_pred EecccceecCCCCCc-eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHH
Q 039819 329 GDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKK 406 (534)
Q Consensus 329 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 406 (534)
+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .+.+..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-------~~~~~~ 242 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-------NEVIEC 242 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHH
Confidence 999999876543322 2233568999999999999999999999999999999999 8999974321 122222
Q ss_pred HhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 407 IQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 407 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
+..... ...+..++.++.+++.+||+.+|++||||+||++.|+.
T Consensus 243 i~~~~~----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~ 286 (299)
T 4asz_A 243 ITQGRV----------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQN 286 (299)
T ss_dssp HHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHcCCC----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 222111 01222345688999999999999999999999999875
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9e-54 Score=431.86 Aligned_cols=239 Identities=26% Similarity=0.427 Sum_probs=191.5
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC------CCcEEEEEEehh--------------hhhhcccCceeeEEEEEeCCCeeEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG------DGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~--------------~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
++|...+.||+|+||.||+|++. +++.||||+++. ++++++|||||+++|+|.+.+..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45666788999999999999874 478899999862 6888999999999999999999999
Q ss_pred EeeccCCCChhhhcccC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcE
Q 039819 262 VYPYMSNGSVASRLREK---------------PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEA 326 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~---------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~ 326 (534)
|||||++|+|.++++.. .+++|.+++.|+.|||+||+|||++ +||||||||+||||++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 99999999999998642 3599999999999999999999998 99999999999999999999
Q ss_pred EEEecccceecCCCCC-ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHH
Q 039819 327 IVGDFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWV 404 (534)
Q Consensus 327 kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 404 (534)
||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||..... .+.+
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-------~~~~ 270 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-------TEAI 270 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH-------HHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH-------HHHH
Confidence 9999999997654332 23345679999999999999999999999999999999999 8999974321 1222
Q ss_pred HHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 405 KKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 405 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
..+..... . ..+..++.++.+|+.+||+.||++||||.||+++|+.
T Consensus 271 ~~i~~g~~------~----~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~ 316 (329)
T 4aoj_A 271 DCITQGRE------L----ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA 316 (329)
T ss_dssp HHHHHTCC------C----CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHcCCC------C----CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 22222211 1 1222345688999999999999999999999999875
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4e-53 Score=421.80 Aligned_cols=241 Identities=27% Similarity=0.403 Sum_probs=189.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
+++...+.||+|+||+||+|++.+ .||||+++ +++++++|||||+++|+|.+ +..+|||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 456677899999999999999754 58999875 26889999999999999865 568999999
Q ss_pred cCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC-Cc
Q 039819 266 MSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SH 343 (534)
Q Consensus 266 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~-~~ 343 (534)
|++|+|.++++. ...++|.+++.|+.|||.||+|||++ +||||||||+||||++++.+||+|||+|+...... ..
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 999999999975 45799999999999999999999998 99999999999999999999999999998765322 22
Q ss_pred eeecccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccc
Q 039819 344 VTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRE 420 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~---~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 420 (534)
.....+||+.|||||++.+ ++|+.++|||||||++|||+||+.||...... ..+........ ..+.
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-------~~~~~~~~~~~----~~p~ 258 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-------DQIIFMVGRGY----ASPD 258 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHHHHHHTTC----CCCC
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhcCC----CCCC
Confidence 3455689999999999853 46899999999999999999999999743221 11111111111 1111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 421 LGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 421 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
+. ..+..++..+.+++.+||+.+|++||||.||++.|+.
T Consensus 259 ~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~ 297 (307)
T 3omv_A 259 LS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp ST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred cc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 11 1222345688999999999999999999999998864
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3e-52 Score=414.84 Aligned_cols=233 Identities=22% Similarity=0.314 Sum_probs=199.3
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|+..+.||+|+||+||+|+.. +++.||||++.+ +++.++|||||++++++.+.+..||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999975 689999998852 678889999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC-C
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-S 342 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~-~ 342 (534)
|||++|+|.+++.+.+.+++..+..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+.... .
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999999999999888899999999999999999999999 99999999999999999999999999999875432 2
Q ss_pred ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+....+.... ..+.
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~~-------~~~p 254 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-------GLIFAKIIKLE-------YDFP 254 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-------CCCC
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCC-------CCCC
Confidence 334567899999999999999999999999999999999999999975332 12222222211 1111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVV 455 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~ 455 (534)
. ..+.++.+++.+|++.||++|||++|+.
T Consensus 255 ~----~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 255 E----KFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp T----TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred c----ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1 2234788999999999999999999874
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.3e-52 Score=418.53 Aligned_cols=235 Identities=19% Similarity=0.291 Sum_probs=197.2
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------hhhhhcccCceeeEEEEEeCCCeeEEEeecc
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCATPTERLLVYPYM 266 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~ 266 (534)
+.|+..+.||+|+||.||+|+.. +|+.||||++. ++++.++|||||+++++|.+.+..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46888899999999999999985 68999999884 2788899999999999999999999999999
Q ss_pred CCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCceee
Q 039819 267 SNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTT 346 (534)
Q Consensus 267 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~ 346 (534)
++|+|.+++... .+++..+..|+.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+.+..... ...
T Consensus 154 ~gg~L~~~l~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~ 228 (346)
T 4fih_A 154 EGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRK 228 (346)
T ss_dssp TTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBC
T ss_pred CCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-ccc
Confidence 999999998764 599999999999999999999999 999999999999999999999999999998754322 345
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCC
Q 039819 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYD 426 (534)
Q Consensus 347 ~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 426 (534)
..+||+.|||||++.+..|+.++|||||||++|||+||+.||..... .+....+.... .+.+. ..
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~~------~~~~~--~~ 293 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDNL------PPRLK--NL 293 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSS------CCCCS--CG
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcCC------CCCCC--cc
Confidence 67899999999999999999999999999999999999999974322 11122221111 01111 11
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 427 RIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 427 ~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...+.++.+++.+||+.||++|||+.|+++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 123457899999999999999999999874
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-52 Score=419.48 Aligned_cols=251 Identities=22% Similarity=0.326 Sum_probs=193.6
Q ss_pred CCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCC----eeEEEeec
Q 039819 203 NFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPT----ERLLVYPY 265 (534)
Q Consensus 203 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~----~~~lv~e~ 265 (534)
+|...+.||+|+||+||+|++ +|+.||||++.. .+..++|||||+++|+|.+.+ ..+|||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 466678999999999999998 588999999852 345678999999999998654 57999999
Q ss_pred cCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC
Q 039819 266 MSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC-----DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 266 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~-----~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~ 340 (534)
|++|+|.++++.. .++|+.+.+|+.|+++||+|||+++ .++||||||||+||||+.++++||+|||+|+.....
T Consensus 83 ~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 161 (303)
T 3hmm_A 83 HEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161 (303)
T ss_dssp CTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred CCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCC
Confidence 9999999999765 5999999999999999999999763 458999999999999999999999999999987544
Q ss_pred CCc---eeeccccccccccccccccC------CCCcchhHHHHHHHHHHHHhCCCCcCCCccccc--------cchHHHH
Q 039819 341 DSH---VTTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELITGMRALEFGKSINQ--------KGAMLEW 403 (534)
Q Consensus 341 ~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~--------~~~~~~~ 403 (534)
... .....+||+.|||||++.+. .++.++||||||||+|||+||++|+........ .....++
T Consensus 162 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~ 241 (303)
T 3hmm_A 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 241 (303)
T ss_dssp TTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHH
T ss_pred CCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHH
Confidence 322 22345799999999998654 467899999999999999999988753322110 0011112
Q ss_pred HHHHhhhcccceecccccCCCC-CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 404 VKKIQQEKKVEVLVDRELGSNY-DRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 404 ~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
...... ...++.+.... +...+..+.+++.+||+.||++||||.||++.|+.
T Consensus 242 ~~~~~~-----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 242 RKVVCE-----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp HHHHTT-----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHhc-----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 111111 11223332221 23456688999999999999999999999999875
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-52 Score=411.83 Aligned_cols=232 Identities=25% Similarity=0.396 Sum_probs=187.3
Q ss_pred CcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeC----CCeeEEEe
Q 039819 205 SSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCAT----PTERLLVY 263 (534)
Q Consensus 205 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~----~~~~~lv~ 263 (534)
...+.||+|+||.||+|... ++..||||++.. +++.++|||||+++++|.+ ....||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 34567999999999999975 688999998842 6788999999999999865 34579999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC-CCCcEEEEecccceecCCCCC
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~-~~~~~kl~DFGla~~~~~~~~ 342 (534)
|||++|+|.+++.+...+++..+..|+.||+.||+|||++ .++||||||||+|||++ .++.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-- 185 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-- 185 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT--
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC--
Confidence 9999999999999888899999999999999999999998 12399999999999998 4899999999999865432
Q ss_pred ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
.....+||+.|||||++. ++|+.++|||||||++|||+||+.||..... .......+...... ..
T Consensus 186 -~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~------~~~~~~~i~~~~~~-----~~-- 250 (290)
T 3fpq_A 186 -FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN------AAQIYRRVTSGVKP-----AS-- 250 (290)
T ss_dssp -SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------HHHHHHHHTTTCCC-----GG--
T ss_pred -ccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc------HHHHHHHHHcCCCC-----CC--
Confidence 344578999999999886 4699999999999999999999999964322 11222222221110 01
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.+...+.++.+++.+||+.||++|||++|+++
T Consensus 251 --~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 --FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11112347889999999999999999999974
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.2e-52 Score=419.23 Aligned_cols=234 Identities=22% Similarity=0.335 Sum_probs=191.2
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
++|...+.||+|+||.||+|+.. +|+.||||++. ++++.++|||||++++++.+.+..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57889999999999999999975 68999999885 26788999999999999999999999999
Q ss_pred ccCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC
Q 039819 265 YMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 265 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 342 (534)
||++|+|.+++... ..+++.+++.|+.||+.||.|||++ +||||||||+||||+.++.+||+|||+|+.+....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence 99999999999643 4579999999999999999999999 99999999999999999999999999998764321
Q ss_pred ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
......+||+.|||||++.+..|+.++|||||||++|||+||+.||..... .+.+..+..... +.+.
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-------~~~~~~i~~~~~------~~~~ 246 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-------KNLVLKIISGSF------PPVS 246 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHTCC------CCCC
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcCCC------CCCC
Confidence 223456799999999999999999999999999999999999999975432 222222222211 1111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
. ..+.++.+++.+||+.||++|||++|+++
T Consensus 247 ~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 247 L----HYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 22457899999999999999999999986
No 11
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.2e-51 Score=410.22 Aligned_cols=228 Identities=25% Similarity=0.315 Sum_probs=191.4
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC----CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCeeEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG----DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
++|+..+.||+|+||+||+|+.. .++.||||++.+ +++.++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57899999999999999999862 468999998752 6788899999999999999999999
Q ss_pred EeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 262 VYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
|||||++|+|.+++.+.+.+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+......
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 999999999999999888899999999999999999999999 99999999999999999999999999998754332
Q ss_pred CceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccccc
Q 039819 342 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDREL 421 (534)
Q Consensus 342 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 421 (534)
......+||+.|||||++.+..|+.++|||||||++|||+||+.||..... .+....+.... ..
T Consensus 181 -~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-------~~~~~~i~~~~-------~~- 244 (304)
T 3ubd_A 181 -KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-------KETMTMILKAK-------LG- 244 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-------CC-
T ss_pred -ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-------HHHHHHHHcCC-------CC-
Confidence 233457899999999999999999999999999999999999999975332 12222222111 01
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCh
Q 039819 422 GSNYDRIEVGEILQVALLCTQYLPVHRPKM 451 (534)
Q Consensus 422 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~ 451 (534)
++...+.++.+++.+||+.||++|||+
T Consensus 245 ---~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 245 ---MPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred ---CCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 122234578999999999999999995
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.1e-50 Score=419.37 Aligned_cols=235 Identities=19% Similarity=0.291 Sum_probs=197.2
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------hhhhhcccCceeeEEEEEeCCCeeEEEeecc
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCATPTERLLVYPYM 266 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~ 266 (534)
+.|+..+.||+|+||.||+|+.. +|+.||||++. .+++.++|||||+++++|.+.+..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 46888999999999999999985 68999999884 2788899999999999999999999999999
Q ss_pred CCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCceee
Q 039819 267 SNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTT 346 (534)
Q Consensus 267 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~ 346 (534)
++|+|.+++... .+++..+..|+.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+.+..... ...
T Consensus 231 ~gG~L~~~i~~~-~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~ 305 (423)
T 4fie_A 231 EGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRK 305 (423)
T ss_dssp TTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-CBC
T ss_pred CCCcHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-ccc
Confidence 999999998754 599999999999999999999999 999999999999999999999999999998754332 345
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCC
Q 039819 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYD 426 (534)
Q Consensus 347 ~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 426 (534)
..+||+.|||||++.+..|+.++|||||||++|||++|+.||..... .+.+..+.... .+.+. ..
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------~~~~~~i~~~~------~~~~~--~~ 370 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------LKAMKMIRDNL------PPRLK--NL 370 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSC------CCCCS--CT
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------HHHHHHHHcCC------CCCCc--cc
Confidence 67899999999999999999999999999999999999999974322 11222222111 01111 11
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 427 RIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 427 ~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...+.++.+++.+||+.||++|||+.|+++
T Consensus 371 ~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 371 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 112357889999999999999999999864
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=9e-52 Score=420.70 Aligned_cols=242 Identities=26% Similarity=0.406 Sum_probs=197.0
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEECC------CcEEEEEEehh---------------hhhhccc-CceeeEEEEEeCC-
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLGD------GTVLAVKRLKD---------------MISLAVH-RNLLRLIGYCATP- 256 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~---------------~l~~~~h-~niv~l~~~~~~~- 256 (534)
..++|...+.||+|+||.||+|++.. ++.||||++.. ++..+.| ||||+++|+|.+.
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 34678889999999999999998632 36899999852 4566655 8999999999765
Q ss_pred CeeEEEeeccCCCChhhhccc----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe
Q 039819 257 TERLLVYPYMSNGSVASRLRE----------------KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL 320 (534)
Q Consensus 257 ~~~~lv~e~~~~gsL~~~l~~----------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl 320 (534)
...++|||||++|+|.++|+. ...++|..++.|+.|||+||+|||++ +||||||||+|||+
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl 218 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILL 218 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceee
Confidence 568999999999999999964 23589999999999999999999999 99999999999999
Q ss_pred CCCCcEEEEecccceecCCCCC-ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccc
Q 039819 321 DDFCEAIVGDFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKG 398 (534)
Q Consensus 321 ~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~ 398 (534)
++++.+||+|||+|+.+..... ......+||+.|||||++.+..|+.++|||||||++|||+| |+.||...... .
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~---~ 295 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID---E 295 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS---H
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH---H
Confidence 9999999999999997754433 23445679999999999999999999999999999999998 99999743221 1
Q ss_pred hHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 399 AMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
.....+..... . ..+...+.++.+++.+||+.||++||||.||++.|+.
T Consensus 296 ---~~~~~i~~g~~------~----~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ 344 (353)
T 4ase_A 296 ---EFCRRLKEGTR------M----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 344 (353)
T ss_dssp ---HHHHHHHHTCC------C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---HHHHHHHcCCC------C----CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 11222222111 1 1122234588999999999999999999999999865
No 14
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.2e-51 Score=399.25 Aligned_cols=231 Identities=21% Similarity=0.345 Sum_probs=183.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-----------------hhhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-----------------DMISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|+..+.||+|+||.||+|+.. +++.||||++. ++++.++|||||++++++.+.+..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999974 68999999874 2678889999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+ +|+|.+++...+.+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-- 166 (275)
T ss_dssp ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC--
Confidence 999 689999999888999999999999999999999999 99999999999999999999999999998765432
Q ss_pred eeeccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
.....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.... ..+....+.... ..+
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-------~~~~~~~i~~~~-------~~~- 231 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-------IPVLFKNISNGV-------YTL- 231 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------HHHHHHHHHHTC-------CCC-
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-------HHHHHHHHHcCC-------CCC-
Confidence 2345689999999999988776 589999999999999999999997432 122222222211 111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+...+.++.+++.+|++.||++|||++|+++
T Consensus 232 ---p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 232 ---PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---CCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1122457889999999999999999999986
No 15
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=8.6e-49 Score=396.29 Aligned_cols=286 Identities=70% Similarity=1.154 Sum_probs=247.9
Q ss_pred eccCCccccCHHHHHHHHhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh---------------hhhhhcccCceee
Q 039819 184 ISLGNLRNFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK---------------DMISLAVHRNLLR 248 (534)
Q Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~---------------~~l~~~~h~niv~ 248 (534)
...+....|+++++....++|...+.||+|+||.||+|+..+++.||||++. +++..++||||++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~ 91 (326)
T 3uim_A 12 VHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 91 (326)
T ss_dssp ---CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCC
T ss_pred cccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccc
Confidence 3456678899999999999999999999999999999998889999999875 2677888999999
Q ss_pred EEEEEeCCCeeEEEeeccCCCChhhhcccC----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC
Q 039819 249 LIGYCATPTERLLVYPYMSNGSVASRLREK----PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC 324 (534)
Q Consensus 249 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~ 324 (534)
++++|......++||||+++|+|.+++... ..+++..+..|+.|++.||.|||+.+.++|+||||||+|||++.++
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~ 171 (326)
T 3uim_A 92 LRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 171 (326)
T ss_dssp CCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC
T ss_pred eEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC
Confidence 999999999999999999999999999753 3499999999999999999999998777899999999999999999
Q ss_pred cEEEEecccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccc-cccchHHHH
Q 039819 325 EAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSI-NQKGAMLEW 403 (534)
Q Consensus 325 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~-~~~~~~~~~ 403 (534)
.+||+|||+++..............||+.|+|||++.+..++.++|||||||++|||+||+.||+..... .......+|
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 251 (326)
T 3uim_A 172 EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251 (326)
T ss_dssp CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHH
T ss_pred CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHH
Confidence 9999999999987655555556667999999999998888999999999999999999999999632211 122345577
Q ss_pred HHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcCCchhhHHh
Q 039819 404 VKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDGLAEKWAA 469 (534)
Q Consensus 404 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~~~~~~~~ 469 (534)
+...........+.+..+........+..+.+++.+|++.+|.+|||+.||+++|++.+..++|..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~~~ 317 (326)
T 3uim_A 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEE 317 (326)
T ss_dssp HTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSCC-
T ss_pred HHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhhhh
Confidence 776666667777788888888888889999999999999999999999999999999877766544
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.7e-48 Score=386.12 Aligned_cols=231 Identities=20% Similarity=0.341 Sum_probs=176.8
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCCC-------
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATPT------- 257 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~------- 257 (534)
.++|+..+.||+|+||.||+|+.. +++.||||++. ++++.++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 456889999999999999999975 68999999874 2678899999999999987544
Q ss_pred -----eeEEEeeccCCCChhhhcccCCC---CCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEE
Q 039819 258 -----ERLLVYPYMSNGSVASRLREKPA---LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVG 329 (534)
Q Consensus 258 -----~~~lv~e~~~~gsL~~~l~~~~~---l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~ 329 (534)
..|+|||||++|+|.+++..... .++..++.|+.||+.||+|||++ +||||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 36899999999999999986543 56677899999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCc-----------eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccc
Q 039819 330 DFGLAKLLDHSDSH-----------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKG 398 (534)
Q Consensus 330 DFGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~ 398 (534)
|||+|+.+...... ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------ 231 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ 231 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------
Confidence 99999977543211 1234579999999999999999999999999999999996 664211
Q ss_pred hHHHHHHHHhhhcccceecccccCCCCCH---HHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 399 AMLEWVKKIQQEKKVEVLVDRELGSNYDR---IEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~---~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.....+..... ..++. .....+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~-------------~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 ERVRTLTDVRN-------------LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHHHHT-------------TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHhc-------------CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01111111111 01111 12245678999999999999999999975
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-48 Score=401.40 Aligned_cols=250 Identities=19% Similarity=0.299 Sum_probs=192.8
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCC------Ce
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATP------TE 258 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~------~~ 258 (534)
++|...+.||+|+||.||+|+.. +|+.||||++.. +++.++|||||++++++... ..
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57889999999999999999975 799999999852 67888999999999997643 56
Q ss_pred eEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecC
Q 039819 259 RLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 259 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
.|||||||+ |+|.+++...+.+++..+..|+.||+.||.|||++ +||||||||+|||++.++.+||+|||+|+.+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 799999996 68999999888999999999999999999999999 99999999999999999999999999998764
Q ss_pred CCC---CceeeccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccc
Q 039819 339 HSD---SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVE 414 (534)
Q Consensus 339 ~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (534)
... .......+||+.|||||++.+. .++.++||||+|||+|||+||+.||......+....+........... ..
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~-~~ 288 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV-IQ 288 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGG-TC
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHH-hh
Confidence 321 2234567899999999998765 569999999999999999999999986544332222222111100000 00
Q ss_pred eec-------ccccCC--CCCH-----HHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 415 VLV-------DRELGS--NYDR-----IEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 415 ~~~-------d~~l~~--~~~~-----~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
... ...+.. ..+. ....++.+++.+||+.||.+|||+.|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000 000000 0000 11347889999999999999999999864
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2e-47 Score=390.89 Aligned_cols=188 Identities=23% Similarity=0.377 Sum_probs=161.1
Q ss_pred HHHhCCCcCCeeccCCcEEEEEEEEC----CCcEEEEEEehh------------hhhhc-ccCceeeEEEEEeCCCeeEE
Q 039819 199 QATENFSSKNILGAGGFGNVYKGKLG----DGTVLAVKRLKD------------MISLA-VHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 199 ~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~------------~l~~~-~h~niv~l~~~~~~~~~~~l 261 (534)
...+.|+..+.||+|+||.||+|+.+ .++.||||++.. ++..+ .|||||++++++.+.+..|+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l 97 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI 97 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence 34578999999999999999999753 467899998752 45555 69999999999999999999
Q ss_pred EeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCC-CcEEEEecccceecCCC
Q 039819 262 VYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDF-CEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~-~~~kl~DFGla~~~~~~ 340 (534)
|||||++|+|.++++ .+++.++..++.|++.||+|||++ +||||||||+|||++.+ +.+||+|||+|+.....
T Consensus 98 vmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~ 171 (361)
T 4f9c_A 98 AMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171 (361)
T ss_dssp EEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred EEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence 999999999999984 489999999999999999999999 99999999999999876 79999999999865432
Q ss_pred CC---------------------------ceeeccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCcCCCc
Q 039819 341 DS---------------------------HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGMRALEFGK 392 (534)
Q Consensus 341 ~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvvl~elltG~~p~~~~~ 392 (534)
.. ......+||+.|||||++.+. .++.++||||+|||+|||+||+.||..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 11 112345799999999999775 48999999999999999999999996543
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.1e-46 Score=406.49 Aligned_cols=230 Identities=24% Similarity=0.305 Sum_probs=191.8
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh--------------------hhhhcccCceeeEEEEEeCCCee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD--------------------MISLAVHRNLLRLIGYCATPTER 259 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~--------------------~l~~~~h~niv~l~~~~~~~~~~ 259 (534)
.++|...+.||+|+||.||+|+.. +|+.||||++.+ ++..++|||||+++++|.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999975 689999999852 34456899999999999999999
Q ss_pred EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
|||||||+||+|.+++...+.+++..+..|+.||+.||+|||++ +||||||||+||||+.+|++||+|||+|+.+..
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 99999999999999999888899999999999999999999999 999999999999999999999999999998754
Q ss_pred CCCceeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecc
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVD 418 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 418 (534)
.. ....+||+.|||||++.. ..|+.++||||+||++|||+||+.||......+ ..+........ .
T Consensus 345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~----~~~i~~~i~~~-~------ 410 (689)
T 3v5w_A 345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----KHEIDRMTLTM-A------ 410 (689)
T ss_dssp CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC----HHHHHHHHHHC-C------
T ss_pred CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHhhcCC-C------
Confidence 32 345689999999999965 579999999999999999999999997433211 11111111111 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCh
Q 039819 419 RELGSNYDRIEVGEILQVALLCTQYLPVHRPKM 451 (534)
Q Consensus 419 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~ 451 (534)
.. ++...+.++.+++.+|++.||.+|++.
T Consensus 411 ~~----~p~~~S~~a~dLI~~lL~~dP~~Rl~~ 439 (689)
T 3v5w_A 411 VE----LPDSFSPELRSLLEGLLQRDVNRRLGC 439 (689)
T ss_dssp CC----CCTTSCHHHHHHHHHHTCSCGGGCTTC
T ss_pred CC----CCccCCHHHHHHHHHHccCCHhHCCCC
Confidence 11 122234578999999999999999983
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.1e-45 Score=372.98 Aligned_cols=266 Identities=37% Similarity=0.653 Sum_probs=226.8
Q ss_pred ccCHHHHHHHHhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh--------------hhhhhcccCceeeEEEEEeCC
Q 039819 191 NFTFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCATP 256 (534)
Q Consensus 191 ~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~~~ 256 (534)
.+++.++..++++|...+.||+|+||.||+|+..++..||||++. ..+..++||||+++++++.+.
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 344555566788999999999999999999999889999999864 267788999999999999999
Q ss_pred CeeEEEeeccCCCChhhhcccCC----CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecc
Q 039819 257 TERLLVYPYMSNGSVASRLREKP----ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFG 332 (534)
Q Consensus 257 ~~~~lv~e~~~~gsL~~~l~~~~----~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFG 332 (534)
+..++||||+++|+|.+++.... .++|..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 99999999999999999997542 599999999999999999999998 99999999999999999999999999
Q ss_pred cceecCCCC-CceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhc
Q 039819 333 LAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEK 411 (534)
Q Consensus 333 la~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 411 (534)
+++...... ........||+.|+|||++.+..++.++|||||||++|||+||+.||....... ......|........
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE-MVNLAEWAVESHNNG 263 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS-CCCHHHHTHHHHTTT
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHH-HHHHHHHhhhccccc
Confidence 998754322 222344568999999999988899999999999999999999999997544322 234556665555556
Q ss_pred ccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 412 KVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 412 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
.....+++.+........+..+.+++.+|++.+|++|||+.||++.|+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 312 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 6667777777777788888999999999999999999999999999875
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.2e-45 Score=399.64 Aligned_cols=237 Identities=21% Similarity=0.285 Sum_probs=197.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------hhhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
.++|...+.||+|+||.||+|+.. +|+.||||.+. ++++.++|||||+++++|.+....||||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 368999999999999999999975 68999999875 267889999999999999999999999999
Q ss_pred cCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCC--CcEEEEecccceecCCCCC
Q 039819 266 MSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDF--CEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 266 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~--~~~kl~DFGla~~~~~~~~ 342 (534)
|++|+|.+++.. ...+++.++..|+.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 999999999864 46799999999999999999999999 99999999999999854 899999999999875432
Q ss_pred ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +....+..... -+.....
T Consensus 312 -~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-------~~~~~i~~~~~---~~~~~~~ 380 (573)
T 3uto_A 312 -SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-------ETLRNVKSCDW---NMDDSAF 380 (573)
T ss_dssp -EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHTTCC---CCCSGGG
T ss_pred -ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-------HHHHHHHhCCC---CCCcccc
Confidence 345568999999999999999999999999999999999999999754321 12222221110 0111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.. .+..+.+++.+||+.||.+|||+.|+++
T Consensus 381 ~~----~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 381 SG----ISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TT----SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cC----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 2347889999999999999999999986
No 22
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.1e-43 Score=356.27 Aligned_cols=233 Identities=21% Similarity=0.327 Sum_probs=196.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
.++|...+.||+|+||.||+|+. .+|+.||||++.. +++.++||||+++++++......++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788899999999999999998 5789999998742 567889999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++|+|.+++...+.+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-- 168 (328)
T ss_dssp CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC--
T ss_pred ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC--
Confidence 9999999999998888899999999999999999999999 99999999999999999999999999998765432
Q ss_pred eeeccccccccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQSS-EKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~~-~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
.....+||+.|+|||++.+..+. .++|||||||++|||+||+.||+.... .+......... . .
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~-~------~-- 232 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-------KELRERVLRGK-Y------R-- 232 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-C------C--
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCC-C------C--
Confidence 23456799999999999887764 799999999999999999999975331 12222221111 0 1
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.+...+..+.+++.+|++.||.+|||++|+++
T Consensus 233 --~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 233 --IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp --CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred --CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11122457889999999999999999999874
No 23
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.5e-42 Score=347.37 Aligned_cols=264 Identities=38% Similarity=0.677 Sum_probs=217.2
Q ss_pred CccccCHHHHHHHHhCCCcC------CeeccCCcEEEEEEEECCCcEEEEEEeh------------------hhhhhccc
Q 039819 188 NLRNFTFRELQQATENFSSK------NILGAGGFGNVYKGKLGDGTVLAVKRLK------------------DMISLAVH 243 (534)
Q Consensus 188 ~~~~~~~~~l~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~------------------~~l~~~~h 243 (534)
....|++.++..++++|... +.||+|+||.||+|.. +++.||||++. .++..++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 35689999999999999887 8999999999999997 67899999874 15678899
Q ss_pred CceeeEEEEEeCCCeeEEEeeccCCCChhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe
Q 039819 244 RNLLRLIGYCATPTERLLVYPYMSNGSVASRLRE---KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL 320 (534)
Q Consensus 244 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl 320 (534)
|||+++++++.+....++||||+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 9999999999999999999999999999999863 45699999999999999999999999 99999999999999
Q ss_pred CCCCcEEEEecccceecCCCCCc-eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccch
Q 039819 321 DDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGA 399 (534)
Q Consensus 321 ~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~ 399 (534)
+.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++|||||||++|||+||+.||........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--- 242 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--- 242 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB---
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH---
Confidence 99999999999999876543222 2334569999999998854 588999999999999999999999975443221
Q ss_pred HHHHHHHHhh-hcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 400 MLEWVKKIQQ-EKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 400 ~~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
+..+...... ...+...+++.+ .......+..+.+++.+|++.+|.+||++.+|++.|+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~ 303 (307)
T 2nru_A 243 LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303 (307)
T ss_dssp TTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 2233222222 122233334433 23456677889999999999999999999999999976
No 24
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.4e-43 Score=370.00 Aligned_cols=248 Identities=18% Similarity=0.246 Sum_probs=201.6
Q ss_pred CHHHHHHHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEe
Q 039819 193 TFRELQQATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCA 254 (534)
Q Consensus 193 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~ 254 (534)
.+.++...+++|...+.||+|+||.||+|+.. +++.||||++.+ ++..++||||++++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34455556789999999999999999999986 478999998852 567788999999999999
Q ss_pred CCCeeEEEeeccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEeccc
Q 039819 255 TPTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGL 333 (534)
Q Consensus 255 ~~~~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGl 333 (534)
+....++|||||++|+|.+++.. ...+++..++.++.|++.||.|||+. +||||||||+|||++.++.+||+|||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhh
Confidence 99999999999999999999986 56799999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCceeeccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHh
Q 039819 334 AKLLDHSDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQ 408 (534)
Q Consensus 334 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 408 (534)
++.............+||+.|+|||++. ...++.++|||||||++|||+||+.||...........+..+..
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--- 298 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE--- 298 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH---
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccc---
Confidence 9877654444445578999999999986 56789999999999999999999999975432211111111110
Q ss_pred hhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCC--CCChHHHHH
Q 039819 409 QEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVH--RPKMSEVVR 456 (534)
Q Consensus 409 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPt~~ev~~ 456 (534)
.. .-+..... ....+.+++.+|+..+|++ ||+++|+++
T Consensus 299 ---~~---~~p~~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 299 ---RF---QFPTQVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp ---HC---CCCSSCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ---cc---cCCccccc----CCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 00 00111111 2347889999999888888 999999986
No 25
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-43 Score=358.55 Aligned_cols=235 Identities=21% Similarity=0.328 Sum_probs=189.3
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
.++|...+.||+|+||.||+|+. .+++.||||++. +++..++||||+++++++......++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 47888999999999999999997 478999999874 26788899999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCce
Q 039819 265 YMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344 (534)
Q Consensus 265 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 344 (534)
|+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++..........
T Consensus 89 ~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 89 YCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 999999999998888899999999999999999999999 99999999999999999999999999998765443333
Q ss_pred eeccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 345 TTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 345 ~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||+.... .+....+.... ...
T Consensus 166 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~-------~~~-- 229 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-------MALYKKIMRGK-------YDV-- 229 (347)
T ss_dssp ------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-------CCC--
T ss_pred ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCC-------CCC--
Confidence 455679999999999987775 8999999999999999999999974321 12222222111 011
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+......+.+++.+|++.||.+|||+.|+++
T Consensus 230 --p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 230 --PKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 1112347789999999999999999999985
No 26
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-43 Score=354.80 Aligned_cols=240 Identities=26% Similarity=0.418 Sum_probs=197.0
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------hhhhhcccCceeeEEEEEeCCCeeEEEeecc
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCATPTERLLVYPYM 266 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~ 266 (534)
++|...+.||+|+||.||+|+.. ++..||+|++. +++..++||||+++++++.+....++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 56788899999999999999985 68999999874 2677889999999999999999999999999
Q ss_pred CCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCce-
Q 039819 267 SNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV- 344 (534)
Q Consensus 267 ~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~- 344 (534)
++|+|.+++.. ...+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 99999999986 56799999999999999999999999 99999999999999999999999999998764332211
Q ss_pred ------------eeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCcccccc--chHHHHHHHHhhh
Q 039819 345 ------------TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQK--GAMLEWVKKIQQE 410 (534)
Q Consensus 345 ------------~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~--~~~~~~~~~~~~~ 410 (534)
.....||+.|+|||++.+..++.++|||||||++|||++|..|+......... ........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~----- 241 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD----- 241 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH-----
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc-----
Confidence 11457999999999999999999999999999999999999998743221111 01111111
Q ss_pred cccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 411 KKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 411 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
... +...+..+.+++.+|++.+|++|||+.++++.|+..
T Consensus 242 --------~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l 280 (310)
T 3s95_A 242 --------RYC----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280 (310)
T ss_dssp --------HTC----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------ccC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011 111234788999999999999999999999998763
No 27
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1e-43 Score=358.83 Aligned_cols=252 Identities=26% Similarity=0.331 Sum_probs=196.5
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCC----eeEEEee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPT----ERLLVYP 264 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~----~~~lv~e 264 (534)
++|+..+.||+|+||.||+|+.. ++.||||++.. .+..++|||||++++++.... ..++|||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e 102 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA 102 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence 57888899999999999999985 78999999852 467789999999999998754 3699999
Q ss_pred ccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CCCeEeccCCCCcEEeCCCCcEEEEecccceec
Q 039819 265 YMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC-------DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337 (534)
Q Consensus 265 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~-------~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~ 337 (534)
|+++|+|.+++... .+++..++.|+.|++.||.|||+.+ .++|+||||||+|||++.++.+||+|||+++..
T Consensus 103 ~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~ 181 (322)
T 3soc_A 103 FHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181 (322)
T ss_dssp CCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEE
T ss_pred cCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccccc
Confidence 99999999999765 4999999999999999999999752 237999999999999999999999999999876
Q ss_pred CCCCCc-eeecccccccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccc---------hHHH
Q 039819 338 DHSDSH-VTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKG---------AMLE 402 (534)
Q Consensus 338 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~---------~~~~ 402 (534)
...... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.......... ....
T Consensus 182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 261 (322)
T 3soc_A 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLED 261 (322)
T ss_dssp CTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHH
T ss_pred ccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhh
Confidence 543321 2334579999999999876 346678999999999999999999997543221111 1111
Q ss_pred HHHHHhhhcccceecccccCCC-CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 403 WVKKIQQEKKVEVLVDRELGSN-YDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 403 ~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
+........ ..+.+... .....+..+.+++.+||+.||++|||+.||++.|+.
T Consensus 262 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 262 MQEVVVHKK-----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp HHHHHTTSC-----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hhhhhhccc-----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111111111 11111111 122345679999999999999999999999999876
No 28
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=8.6e-43 Score=362.97 Aligned_cols=245 Identities=22% Similarity=0.278 Sum_probs=199.2
Q ss_pred HHHHHHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCC
Q 039819 195 RELQQATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATP 256 (534)
Q Consensus 195 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~ 256 (534)
+++....++|...+.||+|+||.||+|+.. +++.||+|++.+ ++..++|||||+++++|.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344455678999999999999999999986 588999998752 56778999999999999999
Q ss_pred CeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEeccccee
Q 039819 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336 (534)
Q Consensus 257 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~ 336 (534)
...|+|||||++|+|.+++... .+++..+..++.||+.||.|||+. +||||||||+|||++.++.+||+|||+++.
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~-~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 9999999999999999998754 589999999999999999999999 999999999999999999999999999988
Q ss_pred cCCCCCceeeccccccccccccccccCC----CCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcc
Q 039819 337 LDHSDSHVTTAVRGTVGHIAPEYLSTGQ----SSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKK 412 (534)
Q Consensus 337 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
............+||+.|+|||++.+.. ++.++|||||||++|||+||+.||...... +....+.....
T Consensus 218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-------~~~~~i~~~~~ 290 (410)
T 3v8s_A 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-------GTYSKIMNHKN 290 (410)
T ss_dssp CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTHHH
T ss_pred eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-------hHHHHHHhccc
Confidence 7654433344678999999999997654 789999999999999999999999754321 11111111100
Q ss_pred cceecccccCCCCCHHHHHHHHHHHHHhcccCCCC--CCChHHHHHH
Q 039819 413 VEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVH--RPKMSEVVRM 457 (534)
Q Consensus 413 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPt~~ev~~~ 457 (534)
.. .... ....+..+.+++.+|++.+|.+ ||+++||++.
T Consensus 291 ~~-----~~p~--~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 291 SL-----TFPD--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HC-----CCCT--TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cc-----cCCC--cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00 0000 0012347889999999999988 9999999863
No 29
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.3e-42 Score=344.93 Aligned_cols=236 Identities=20% Similarity=0.316 Sum_probs=196.1
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh--------------hhhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
.++|...+.||+|+||.||+|.. .+++.||||++. .++..++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 36799999999999999999996 578999999874 257788999999999999999999999999
Q ss_pred cCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCcee
Q 039819 266 MSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT 345 (534)
Q Consensus 266 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 345 (534)
+++|+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++........ ..
T Consensus 99 ~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~ 173 (297)
T 3fxz_A 99 LAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KR 173 (297)
T ss_dssp CTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-CB
T ss_pred CCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-cc
Confidence 9999999999765 589999999999999999999999 999999999999999999999999999987654332 23
Q ss_pred eccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCC
Q 039819 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNY 425 (534)
Q Consensus 346 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 425 (534)
....||+.|+|||++.+..++.++|||||||++|||+||+.||...... ............. ...
T Consensus 174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------~~~~~~~~~~~~~--------~~~ 238 (297)
T 3fxz_A 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYLIATNGTPE--------LQN 238 (297)
T ss_dssp CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHHCSCC--------CSC
T ss_pred CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhCCCCC--------CCC
Confidence 4567999999999999999999999999999999999999999743221 1111111111100 011
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 426 DRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 426 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+...+..+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1223457889999999999999999999985
No 30
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.7e-43 Score=352.82 Aligned_cols=239 Identities=29% Similarity=0.433 Sum_probs=189.1
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
.++|+..+.||+|+||.||+|+. .+..||||++. +++..++||||+++++++.+....++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 45788889999999999999988 67889999874 25788899999999999999999999999
Q ss_pred ccCCCChhhhcccCCC---CCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 265 YMSNGSVASRLREKPA---LDWNTRKRIAIGAARGLLYLHEQCDPK--IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 265 ~~~~gsL~~~l~~~~~---l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
|+++|+|.+++..... +++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++....
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 9999999999986553 99999999999999999999998 7 99999999999999999999999999986543
Q ss_pred CCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
.. .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... +.......... ..
T Consensus 192 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-------~~~~~~~~~~~-----~~ 258 (309)
T 3p86_A 192 TF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-------QVVAAVGFKCK-----RL 258 (309)
T ss_dssp -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHHHHHHSCC-----CC
T ss_pred cc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhcCC-----CC
Confidence 22 2233456999999999999989999999999999999999999999743221 11111111110 01
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
..+...+..+.+++.+||+.+|.+|||+.++++.|+.
T Consensus 259 ----~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~ 295 (309)
T 3p86_A 259 ----EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRP 295 (309)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1122234578999999999999999999999999875
No 31
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.6e-43 Score=361.08 Aligned_cols=240 Identities=28% Similarity=0.437 Sum_probs=196.2
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE--------CCCcEEEEEEehh---------------hhhhc-ccCceeeEEEEEeCC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL--------GDGTVLAVKRLKD---------------MISLA-VHRNLLRLIGYCATP 256 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~---------------~l~~~-~h~niv~l~~~~~~~ 256 (534)
.++|...+.||+|+||.||+|+. .++..||||+++. ++..+ +||||++++++|.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 36788889999999999999986 2456799998852 56666 899999999999999
Q ss_pred CeeEEEeeccCCCChhhhcccC----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe
Q 039819 257 TERLLVYPYMSNGSVASRLREK----------------PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL 320 (534)
Q Consensus 257 ~~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl 320 (534)
+..++||||+++|+|.+++... ..+++..++.++.||+.||.|||++ +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 9999999999999999999753 2489999999999999999999999 99999999999999
Q ss_pred CCCCcEEEEecccceecCCCCCc-eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccc
Q 039819 321 DDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKG 398 (534)
Q Consensus 321 ~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~ 398 (534)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~---- 312 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---- 312 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH----
Confidence 99999999999999976543221 2233457889999999999899999999999999999999 99999743211
Q ss_pred hHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 399 AMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
.+.. ...... ....+...+..+.+++.+||+.+|.+||++.|+++.|+.
T Consensus 313 ~~~~---~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 313 ELFK---LLKEGH----------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361 (370)
T ss_dssp GHHH---HHHTTC----------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHH---HHhcCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1111 111111 011122234578999999999999999999999999875
No 32
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.4e-43 Score=344.21 Aligned_cols=242 Identities=27% Similarity=0.415 Sum_probs=201.7
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCCeeEEEeeccC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPTERLLVYPYMS 267 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~ 267 (534)
.++|...+.||+|+||.||+|+..++..||||.+.. .+..++||||+++++++.+....++||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 367888899999999999999999888999998852 6778899999999999999999999999999
Q ss_pred CCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCceee
Q 039819 268 NGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTT 346 (534)
Q Consensus 268 ~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~ 346 (534)
+++|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 87 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 163 (268)
T 3sxs_A 87 NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163 (268)
T ss_dssp TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECC
T ss_pred CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhccc
Confidence 99999999754 4599999999999999999999999 9999999999999999999999999999977654433334
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCC
Q 039819 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNY 425 (534)
Q Consensus 347 ~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 425 (534)
...+|..|+|||.+.+..++.++||||||+++|||+| |+.||...... +.......... . ..
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~---~-------~~ 226 (268)
T 3sxs_A 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-------EVVLKVSQGHR---L-------YR 226 (268)
T ss_dssp SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTTCC---C-------CC
T ss_pred CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-------HHHHHHHcCCC---C-------CC
Confidence 4556788999999988889999999999999999999 99999743321 11111111110 0 01
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcCC
Q 039819 426 DRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDG 462 (534)
Q Consensus 426 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 462 (534)
+...+..+.+++.+|++.+|.+|||+.|+++.|+...
T Consensus 227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 227 PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1112347899999999999999999999999998754
No 33
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.6e-42 Score=346.69 Aligned_cols=247 Identities=19% Similarity=0.280 Sum_probs=202.9
Q ss_pred cccCHHHHHHHHhC----------CCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------hhhhhcccC
Q 039819 190 RNFTFRELQQATEN----------FSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------DMISLAVHR 244 (534)
Q Consensus 190 ~~~~~~~l~~~~~~----------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------~~l~~~~h~ 244 (534)
..|+++++..+++. |...+.||+|+||.||+|+.. +|+.||||++. ..+..++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45788999988875 566678999999999999986 79999999875 267788999
Q ss_pred ceeeEEEEEeCCCeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC
Q 039819 245 NLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC 324 (534)
Q Consensus 245 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~ 324 (534)
||+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCC
Confidence 999999999999999999999999999998875 4599999999999999999999998 999999999999999999
Q ss_pred cEEEEecccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHH
Q 039819 325 EAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWV 404 (534)
Q Consensus 325 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~ 404 (534)
.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+..
T Consensus 179 ~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-------~~~~ 250 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-------VQAM 250 (321)
T ss_dssp CEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHH
T ss_pred cEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHH
Confidence 999999999987654322 23446799999999999998999999999999999999999999974322 1111
Q ss_pred HHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 405 KKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 405 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
....... .+.+. .....+..+.+++.+|++.+|++|||+.|+++
T Consensus 251 ~~~~~~~------~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 251 KRLRDSP------PPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHHHHSS------CCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHhcCC------CCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111 01111 11122347889999999999999999999986
No 34
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.3e-42 Score=356.72 Aligned_cols=237 Identities=23% Similarity=0.314 Sum_probs=191.3
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhc-ccCceeeEEEEEeCCCeeEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLA-VHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~-~h~niv~l~~~~~~~~~~~l 261 (534)
.++|...+.||+|+||.||+|+.. +++.||||++++ ++..+ +|||||++++++.+....++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357888999999999999999986 578999998863 23333 79999999999999999999
Q ss_pred EeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 262 VYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
||||+++|+|..++.....+++..++.++.||+.||.|||++ +||||||||+|||++.++.+||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~- 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP- 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC-
Confidence 999999999999998888899999999999999999999999 9999999999999999999999999999863322
Q ss_pred CceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCcccccc-chHHHHHHHHhhhcccceecccc
Q 039819 342 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQK-GAMLEWVKKIQQEKKVEVLVDRE 420 (534)
Q Consensus 342 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~ 420 (534)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....+++......... .
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~ 280 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R 280 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------C
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------C
Confidence 22345578999999999999999999999999999999999999999743221110 1111111111111111 1
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCh
Q 039819 421 LGSNYDRIEVGEILQVALLCTQYLPVHRPKM 451 (534)
Q Consensus 421 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~ 451 (534)
++......+.+++.+|++.||.+||++
T Consensus 281 ----~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 ----IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ----CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 122234578899999999999999996
No 35
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.2e-42 Score=351.24 Aligned_cols=238 Identities=23% Similarity=0.336 Sum_probs=195.5
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
.++|...+.||+|+||.||+|+.. +++.||||++. .++..++||||+++++++.+....++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 367888999999999999999986 78999999873 26778899999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC-Cc
Q 039819 265 YMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SH 343 (534)
Q Consensus 265 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~-~~ 343 (534)
|+++|+|.+++.....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999999999888899999999999999999999998 99999999999999999999999999998764322 12
Q ss_pred eeeccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
......||+.|+|||++.+..+ +.++|||||||++|||+||+.||....... .....|.. ....
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~~~~~---~~~~---------- 227 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC--QEYSDWKE---KKTY---------- 227 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS--HHHHHHHT---TCTT----------
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH--HHHHHHhc---cccc----------
Confidence 2335679999999999987765 789999999999999999999997543211 11111111 0000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..........+.+++.+|++.+|.+|||+.|+++
T Consensus 228 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 228 LNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0001122357889999999999999999999874
No 36
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.2e-42 Score=346.80 Aligned_cols=248 Identities=23% Similarity=0.355 Sum_probs=193.5
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-----------hhhh--cccCceeeEEEEEeC----CCeeEEEe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-----------MISL--AVHRNLLRLIGYCAT----PTERLLVY 263 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-----------~l~~--~~h~niv~l~~~~~~----~~~~~lv~ 263 (534)
.++|...+.||+|+||.||+|+. +++.||||++.. ++.. ++||||+++++++.. ....++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 46788999999999999999998 688999999852 2333 789999999998754 34578999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEeccCCCCcEEeCCCCcEEEEecccce
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH--------EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK 335 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH--------~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~ 335 (534)
||+++|+|.++++. ..+++..++.|+.|++.||.||| +. +|+||||||+|||++.++.+||+|||+++
T Consensus 86 e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 86 HYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp CCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred hhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 99999999999964 46999999999999999999999 66 99999999999999999999999999998
Q ss_pred ecCCCCCce---eeccccccccccccccccC------CCCcchhHHHHHHHHHHHHhC----------CCCcCCCccccc
Q 039819 336 LLDHSDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELITG----------MRALEFGKSINQ 396 (534)
Q Consensus 336 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~k~Dv~S~Gvvl~elltG----------~~p~~~~~~~~~ 396 (534)
......... .....||+.|+|||++.+. .++.++|||||||++|||+|| +.||........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~ 241 (301)
T 3q4u_A 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241 (301)
T ss_dssp EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence 765443322 2234799999999999776 456799999999999999999 777754322111
Q ss_pred cchHHHHHHHHhhhcccceecccccCC-CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 397 KGAMLEWVKKIQQEKKVEVLVDRELGS-NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
. ............. .+.+.. ......+..+.+++.+||+.+|++|||+.||++.|+.
T Consensus 242 ~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 242 S--FEDMRKVVCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp C--HHHHHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred c--hhhhhHHHhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 1 1111111111111 111111 1223456789999999999999999999999999875
No 37
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.1e-42 Score=343.45 Aligned_cols=244 Identities=24% Similarity=0.318 Sum_probs=194.3
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-----------------hhhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-----------------DMISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. ++..||||.+. ..+..++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 57888899999999999999975 68999999873 1567788999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++|+|.+++.....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 91 e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 9999999999998888899999999999999999999999 9999999999999999999999999999876544333
Q ss_pred eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
......||+.|+|||++.+..++.++|||||||++|||+||+.||...... .......... ... .......
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~-~~~-~~~~~~~ 238 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-------SIAIKHIQDS-VPN-VTTDVRK 238 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-------HHHHHHHSSC-CCC-HHHHSCT
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhhcc-CCC-cchhccc
Confidence 344567999999999999989999999999999999999999999753321 1111111110 000 0011111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCC-ChHHHHHHhhcC
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRP-KMSEVVRMLEGD 461 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RP-t~~ev~~~L~~~ 461 (534)
..+..+.+++.+|++.+|.+|| +++++.+.|+..
T Consensus 239 ----~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 239 ----DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp ----TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred ----CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 2245789999999999999999 899999888753
No 38
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.2e-43 Score=362.99 Aligned_cols=247 Identities=20% Similarity=0.240 Sum_probs=198.7
Q ss_pred CHHHHHHHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEe
Q 039819 193 TFRELQQATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCA 254 (534)
Q Consensus 193 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~ 254 (534)
.+++.....++|...+.||+|+||.||+|+.. +++.||||++.+ ++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 44555556789999999999999999999985 689999998852 466778999999999999
Q ss_pred CCCeeEEEeeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEeccc
Q 039819 255 TPTERLLVYPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGL 333 (534)
Q Consensus 255 ~~~~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGl 333 (534)
+....|+||||+++|+|.+++... ..+++..++.++.||+.||.|||+. +||||||||+|||++.++++||+|||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechh
Confidence 999999999999999999999764 4799999999999999999999998 999999999999999999999999999
Q ss_pred ceecCCCCCceeeccccccccccccccc-------cCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHH
Q 039819 334 AKLLDHSDSHVTTAVRGTVGHIAPEYLS-------TGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKK 406 (534)
Q Consensus 334 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 406 (534)
++.............+||+.|+|||++. ...++.++|||||||++|||+||+.||....... ....
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-------~~~~ 281 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE-------TYGK 281 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-------HHHH
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH-------HHHH
Confidence 9987654433344568999999999986 3568999999999999999999999997543211 1111
Q ss_pred HhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCC---CChHHHHH
Q 039819 407 IQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHR---PKMSEVVR 456 (534)
Q Consensus 407 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R---Pt~~ev~~ 456 (534)
+...... ..-+.. ....+.++.+++.+|+. +|.+| |+++|+++
T Consensus 282 i~~~~~~--~~~p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 282 IVHYKEH--LSLPLV----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHTHHHH--CCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHhcccC--cCCCcc----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1110000 000111 11224578999999999 99998 58888864
No 39
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1e-42 Score=349.85 Aligned_cols=251 Identities=22% Similarity=0.291 Sum_probs=192.8
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
.++|...+.||+|+||.||+|+..+++.||||++. +++..++||||+++++++.+....++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 36788899999999999999999889999999875 26778899999999999999999999999
Q ss_pred ccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 265 YMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 265 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
|+++ +|.+.+.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 9985 77777764 45699999999999999999999999 999999999999999999999999999997753322
Q ss_pred eeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcc-----cceec
Q 039819 344 VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKK-----VEVLV 417 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 417 (534)
......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........+............ .....
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 254 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHH
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhh
Confidence 2334568999999999876 56899999999999999999999999754433222111111110000000 00000
Q ss_pred cccc--CCCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 418 DREL--GSNYD-----RIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 418 d~~l--~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+... ..... .....++.+++.+|++.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp SCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000 00000 112347889999999999999999999985
No 40
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1e-41 Score=346.37 Aligned_cols=234 Identities=23% Similarity=0.285 Sum_probs=196.4
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +++.||||++.+ ++..++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888999999999999999985 689999998852 567788999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++|+|.+++.....+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~ 160 (337)
T 1o6l_A 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-A 160 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-C
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-C
Confidence 9999999999998888899999999999999999999999 99999999999999999999999999998643222 2
Q ss_pred eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.... ..
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~-------~~--- 223 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------ERLFELILMEE-------IR--- 223 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-------CC---
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-------HHHHHHHHcCC-------CC---
Confidence 34456799999999999998999999999999999999999999974321 11112211111 01
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCC-----ChHHHHHH
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRP-----KMSEVVRM 457 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RP-----t~~ev~~~ 457 (534)
++...+..+.+++.+|++.+|.+|| +++|+++.
T Consensus 224 -~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 224 -FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1122345789999999999999999 88888763
No 41
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=343.33 Aligned_cols=254 Identities=17% Similarity=0.252 Sum_probs=201.3
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCC--eeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPT--ERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~--~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +++.||||++.. ++..++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56888899999999999999986 489999998752 677889999999999998765 679999
Q ss_pred eccCCCChhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe----CCCCcEEEEeccccee
Q 039819 264 PYMSNGSVASRLREKP---ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL----DDFCEAIVGDFGLAKL 336 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl----~~~~~~kl~DFGla~~ 336 (534)
||+++|+|.+++.... .+++..++.|+.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 9999999999997543 399999999999999999999999 99999999999999 8888999999999998
Q ss_pred cCCCCCceeeccccccccccccccc--------cCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHH-HHHHHH
Q 039819 337 LDHSDSHVTTAVRGTVGHIAPEYLS--------TGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML-EWVKKI 407 (534)
Q Consensus 337 ~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~-~~~~~~ 407 (534)
...... .....||..|+|||++. +..++.++|||||||++|||+||+.||...........+. ......
T Consensus 166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp CCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred cCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 754332 33456999999999985 5678999999999999999999999997433222222121 211111
Q ss_pred hhhccccee---------cccc--cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 408 QQEKKVEVL---------VDRE--LGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 408 ~~~~~~~~~---------~d~~--l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
.......+ .... ............+.+++.+|++.||++|||++|+++...+.
T Consensus 244 -p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 244 -PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp -CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred -CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 11111100 1111 12244567778899999999999999999999999987653
No 42
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.3e-43 Score=343.98 Aligned_cols=239 Identities=26% Similarity=0.423 Sum_probs=198.9
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCCeeEEEeeccCC
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPTERLLVYPYMSN 268 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~~ 268 (534)
++|...+.||+|+||.||+|+..++..||||++.. ++..++||||+++++++.+....++||||+++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence 56788899999999999999998899999998752 67888999999999999999999999999999
Q ss_pred CChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCceeec
Q 039819 269 GSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA 347 (534)
Q Consensus 269 gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~ 347 (534)
|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 90 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 999999964 45699999999999999999999999 99999999999999999999999999998764432222334
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCC
Q 039819 348 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYD 426 (534)
Q Consensus 348 ~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 426 (534)
..+|..|+|||++.+..++.++||||||+++|||+| |+.||..... .+.......... ...+
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~-------~~~~~~~~~~~~----------~~~~ 229 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------SEVVEDISTGFR----------LYKP 229 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTCC----------CCCC
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH-------HHHHHHHhcCcc----------CCCC
Confidence 457788999999988899999999999999999999 9999974321 112222211110 1111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 427 RIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 427 ~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
...+..+.+++.+|++.+|++||++.++++.|+.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 263 (269)
T 4hcu_A 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 263 (269)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 2224578999999999999999999999999875
No 43
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=9.9e-43 Score=352.21 Aligned_cols=239 Identities=26% Similarity=0.404 Sum_probs=194.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC----CCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG----DGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
++|...+.||+|+||.||+|++. .+..||||++.. ++..++||||+++++++.+....++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56778899999999999999984 455799998852 57788999999999999999999999
Q ss_pred eeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 263 YPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
|||+++|+|.+++... ..+++..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999654 5799999999999999999999999 99999999999999999999999999999875432
Q ss_pred Cc--eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecc
Q 039819 342 SH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVD 418 (534)
Q Consensus 342 ~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 418 (534)
.. ......+|..|+|||++.+..++.++|||||||++|||++ |+.||..... .+..........
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-------~~~~~~~~~~~~------ 272 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN-------RDVISSVEEGYR------ 272 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH-------HHHHHHHHTTCC------
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHHcCCC------
Confidence 21 2223346778999999988899999999999999999999 9999964321 111121111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 419 RELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 419 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
...+...+..+.+++.+||+.+|.+||++.+|++.|+.
T Consensus 273 ----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~ 310 (325)
T 3kul_A 273 ----LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310 (325)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11122234588999999999999999999999999986
No 44
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.6e-42 Score=350.43 Aligned_cols=237 Identities=23% Similarity=0.275 Sum_probs=196.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh--------------------hhhhcccCceeeEEEEEeCCCee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD--------------------MISLAVHRNLLRLIGYCATPTER 259 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~--------------------~l~~~~h~niv~l~~~~~~~~~~ 259 (534)
.+.|...+.||+|+||.||+|+.. +|..||||.+.. ++..+.||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467888999999999999999985 689999998742 56778899999999999999999
Q ss_pred EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC----cEEEEecccce
Q 039819 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAK 335 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~----~~kl~DFGla~ 335 (534)
++||||+++|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 99999999999999998888899999999999999999999999 999999999999998877 79999999999
Q ss_pred ecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccce
Q 039819 336 LLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEV 415 (534)
Q Consensus 336 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.....
T Consensus 168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-------~~~~~~i~~~~~--- 235 (361)
T 2yab_A 168 EIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------QETLANITAVSY--- 235 (361)
T ss_dssp ECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHTTCC---
T ss_pred EcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhcCC---
Confidence 775432 23456799999999999988999999999999999999999999974321 111222211100
Q ss_pred ecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 416 LVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 416 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
-+++..... .+..+.+++.+|++.||.+|||+.|+++
T Consensus 236 ~~~~~~~~~----~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 236 DFDEEFFSQ----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCchhccC----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 001111111 2347889999999999999999999986
No 45
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.5e-43 Score=361.41 Aligned_cols=241 Identities=27% Similarity=0.417 Sum_probs=196.7
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
.++|...+.||+|+||.||+|++. +++.||||.++. ++..++||||++++++|......++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 356778899999999999999986 789999998752 5778899999999999999999999999
Q ss_pred ccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 265 YMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 265 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
|+++|+|.++++.. ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999754 4699999999999999999999999 9999999999999999999999999999865432111
Q ss_pred ee-eccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceeccccc
Q 039819 344 VT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDREL 421 (534)
Q Consensus 344 ~~-~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 421 (534)
.. ....++..|+|||.+..+.++.++|||||||++|||+| |+.||...... +..........
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~--------- 333 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------QTREFVEKGGR--------- 333 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------HHHHHHHTTCC---------
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCC---------
Confidence 11 11235778999999988899999999999999999999 99999743211 11111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 422 GSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 422 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
...+...+..+.+++.+||+.+|++|||+.++++.|+..
T Consensus 334 -~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 334 -LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 111222345889999999999999999999999998753
No 46
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=352.41 Aligned_cols=234 Identities=27% Similarity=0.379 Sum_probs=190.3
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhc-ccCceeeEEEEEeCCCeeEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLA-VHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~-~h~niv~l~~~~~~~~~~~l 261 (534)
.++|...+.||+|+||.||+|+.. +++.||||++.+ ++..+ .||||+++++++.+....|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468889999999999999999975 589999998852 34444 69999999999999999999
Q ss_pred EeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 262 VYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
||||+++|+|.+++.....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~- 177 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN- 177 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC-
Confidence 999999999999998888899999999999999999999999 9999999999999999999999999999864322
Q ss_pred CceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccccc
Q 039819 342 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDREL 421 (534)
Q Consensus 342 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 421 (534)
.......+||+.|+|||++.+..++.++|||||||++|||+||+.||...... +....+.... .
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-------~~~~~i~~~~-------~-- 241 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-------DLFEAILNDE-------V-- 241 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCC-------C--
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-------HHHHHHHcCC-------C--
Confidence 22344567999999999998888999999999999999999999999754321 1122221111 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCh------HHHHH
Q 039819 422 GSNYDRIEVGEILQVALLCTQYLPVHRPKM------SEVVR 456 (534)
Q Consensus 422 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~------~ev~~ 456 (534)
.++......+.+++.+|++.+|.+||++ +|+++
T Consensus 242 --~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 --VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1112234578899999999999999998 66654
No 47
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.9e-42 Score=350.09 Aligned_cols=239 Identities=22% Similarity=0.276 Sum_probs=172.9
Q ss_pred CCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------hhhhcc-cCceeeEEEEEeCCCeeEEEeeccCCCChhh
Q 039819 207 KNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------MISLAV-HRNLLRLIGYCATPTERLLVYPYMSNGSVAS 273 (534)
Q Consensus 207 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------~l~~~~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 273 (534)
.+.||+|+||.||+|+.. +++.||||++.. .+..+. ||||+++++++.+....++||||+++|+|.+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 95 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE 95 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHH
Confidence 378999999999999985 689999999863 455565 9999999999999999999999999999999
Q ss_pred hcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC---cEEEEecccceecCCCCCceeecccc
Q 039819 274 RLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC---EAIVGDFGLAKLLDHSDSHVTTAVRG 350 (534)
Q Consensus 274 ~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~---~~kl~DFGla~~~~~~~~~~~~~~~g 350 (534)
++.....+++..+..|+.|++.||.|||++ +|+||||||+|||++.++ .+||+|||+++...... .......|
T Consensus 96 ~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~ 171 (325)
T 3kn6_A 96 RIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKTPCF 171 (325)
T ss_dssp HHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-CcccccCC
Confidence 999888899999999999999999999999 999999999999997665 89999999998765432 22344568
Q ss_pred ccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCCHHHH
Q 039819 351 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEV 430 (534)
Q Consensus 351 t~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 430 (534)
|+.|+|||++.+..++.++|||||||++|||++|+.||.............+....+..... ..........+
T Consensus 172 t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~s 244 (325)
T 3kn6_A 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF-------SFEGEAWKNVS 244 (325)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCC-------CCCSHHHHTSC
T ss_pred CcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCC-------CCCcccccCCC
Confidence 99999999999889999999999999999999999999754332211222233332222110 00000001124
Q ss_pred HHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 431 GEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 431 ~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..+.+++.+|++.||.+|||+.|+++
T Consensus 245 ~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 245 QEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 57899999999999999999998863
No 48
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=9.7e-43 Score=344.57 Aligned_cols=240 Identities=23% Similarity=0.373 Sum_probs=196.5
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCCeeEEEeeccC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPTERLLVYPYMS 267 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~ 267 (534)
.++|...+.||+|+||.||+|+..++..||||++.. ++..+.||||+++++++.+....++||||++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 357888899999999999999999888999998862 6778889999999999999999999999999
Q ss_pred CCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCceee
Q 039819 268 NGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTT 346 (534)
Q Consensus 268 ~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~ 346 (534)
+|+|.+++.. ...+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...........
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (283)
T 3gen_A 103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179 (283)
T ss_dssp TCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence 9999999976 56799999999999999999999999 9999999999999999999999999999876443222223
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCC
Q 039819 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNY 425 (534)
Q Consensus 347 ~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 425 (534)
...+|..|+|||++.+..++.++||||||+++|||+| |+.||...... +......... ....
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-------~~~~~~~~~~----------~~~~ 242 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-------ETAEHIAQGL----------RLYR 242 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-------HHHHHHHTTC----------CCCC
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-------HHHHHHhccc----------CCCC
Confidence 3456788999999998899999999999999999999 99999743221 1111111111 0111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 426 DRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 426 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
+...+..+.+++.+|++.+|.+|||+.++++.|+.
T Consensus 243 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 277 (283)
T 3gen_A 243 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 277 (283)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 11223578999999999999999999999999875
No 49
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-41 Score=340.27 Aligned_cols=230 Identities=27% Similarity=0.386 Sum_probs=195.1
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +++.||+|++.+ ++..+.||||+++++++.+....++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 57888999999999999999985 689999998752 566788999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--- 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--- 159 (318)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC---
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc---
Confidence 9999999999999888899999999999999999999998 9999999999999999999999999999876432
Q ss_pred eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.... ..
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~i~~~~-------~~--- 221 (318)
T 1fot_A 160 -TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-------MKTYEKILNAE-------LR--- 221 (318)
T ss_dssp -BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHCC-------CC---
T ss_pred -cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCC-------CC---
Confidence 3346799999999999998999999999999999999999999974321 11112211111 01
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCC-----ChHHHHH
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRP-----KMSEVVR 456 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RP-----t~~ev~~ 456 (534)
++......+.+++.+|++.+|++|| +++|+++
T Consensus 222 -~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 222 -FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1112235789999999999999999 7888875
No 50
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.2e-42 Score=347.18 Aligned_cols=251 Identities=24% Similarity=0.334 Sum_probs=178.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
.++|...+.||+|+||.||+|... +++.||||++. +++..++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467889999999999999999875 68999999874 26778899999999999999999999999
Q ss_pred ccCCCChhhhcccC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecC
Q 039819 265 YMSNGSVASRLREK------PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 265 ~~~~gsL~~~l~~~------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
|++ |+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 5999888632 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcc--cce
Q 039819 339 HSDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKK--VEV 415 (534)
Q Consensus 339 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 415 (534)
.... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........+............ ...
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence 3322 2234568999999999876 46899999999999999999999999754432211111111100000000 000
Q ss_pred --ecccccCC------------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 416 --LVDRELGS------------NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 416 --~~d~~l~~------------~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...+.+.. .........+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000000 000112347899999999999999999999874
No 51
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.6e-43 Score=368.42 Aligned_cols=240 Identities=24% Similarity=0.407 Sum_probs=197.8
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCCeeEEEeeccC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPTERLLVYPYMS 267 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~ 267 (534)
.++|...+.||+|+||.||+|.+.++..||||+++. +++.++|||||++++++. .+..++|||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~ 265 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA 265 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence 467788899999999999999998899999998862 678889999999999986 567899999999
Q ss_pred CCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCcee
Q 039819 268 NGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT 345 (534)
Q Consensus 268 ~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 345 (534)
+|+|.++++.. ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..........
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~ 342 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence 99999999753 3689999999999999999999999 999999999999999999999999999987643221122
Q ss_pred eccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCC
Q 039819 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSN 424 (534)
Q Consensus 346 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 424 (534)
....+|..|+|||++....++.++|||||||++|||+| |+.||..... .+....+..... ..
T Consensus 343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~-------~~~~~~i~~~~~----------~~ 405 (454)
T 1qcf_A 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-------PEVIRALERGYR----------MP 405 (454)
T ss_dssp CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHHHHTCC----------CC
T ss_pred CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCC----------CC
Confidence 23446789999999998899999999999999999999 9999974321 111222211111 01
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 425 YDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 425 ~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
.+...+..+.+++.+||+.+|++|||+.+|++.|+..
T Consensus 406 ~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~ 442 (454)
T 1qcf_A 406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442 (454)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 1222345889999999999999999999999999864
No 52
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.3e-42 Score=357.91 Aligned_cols=240 Identities=28% Similarity=0.428 Sum_probs=185.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC----CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG----DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
++|...+.||+|+||.||+|+.. ++..||||+++ .++..++||||+++++++.+....++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57888999999999999999874 57789999875 257788999999999999999999999
Q ss_pred eeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 263 YPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
|||+++|+|.+++... ..+++..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999999999764 4699999999999999999999999 99999999999999999999999999998765432
Q ss_pred Cce--eeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecc
Q 039819 342 SHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVD 418 (534)
Q Consensus 342 ~~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 418 (534)
... .....+|..|+|||++.+..++.++|||||||++|||++ |+.||..... .+..........
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-------~~~~~~i~~~~~------ 268 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-------QDVIKAVDEGYR------ 268 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-------HHHHHHHHTTEE------
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCC------
Confidence 211 122235778999999998999999999999999999998 9999964321 111222111110
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 419 RELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 419 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
...+...+..+.+++.+|++.+|.+||++.+|+++|+..
T Consensus 269 ----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 269 ----LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp ----CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 111222345889999999999999999999999998764
No 53
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.8e-43 Score=358.18 Aligned_cols=249 Identities=25% Similarity=0.393 Sum_probs=198.4
Q ss_pred CHHHHHHHHhCCCcCCeeccCCcEEEEEEEE------CCCcEEEEEEehh---------------hhhhc-ccCceeeEE
Q 039819 193 TFRELQQATENFSSKNILGAGGFGNVYKGKL------GDGTVLAVKRLKD---------------MISLA-VHRNLLRLI 250 (534)
Q Consensus 193 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~---------------~l~~~-~h~niv~l~ 250 (534)
...+.....++|...+.||+|+||.||+|++ .+++.||||++.. ++..+ .|||||+++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3344445568899999999999999999974 3468899999852 45555 799999999
Q ss_pred EEEeCCCe-eEEEeeccCCCChhhhcccCCC-------------------------------------------------
Q 039819 251 GYCATPTE-RLLVYPYMSNGSVASRLREKPA------------------------------------------------- 280 (534)
Q Consensus 251 ~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------- 280 (534)
++|.+.+. .++||||+++|+|.+++.....
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 99988655 8999999999999999975432
Q ss_pred -----------------CCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC-C
Q 039819 281 -----------------LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-S 342 (534)
Q Consensus 281 -----------------l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~-~ 342 (534)
+++..++.|+.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 89999999999999999999999 99999999999999999999999999998764332 2
Q ss_pred ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceeccccc
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDREL 421 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 421 (534)
.......||..|+|||++.+..++.++|||||||++|||+| |+.||....... .+ ......... .
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~---~~~~~~~~~------~-- 315 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE---EF---CRRLKEGTR------M-- 315 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH---HH---HHHHHHTCC------C--
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH---HH---HHHHHcCCC------C--
Confidence 23345568999999999999999999999999999999999 999997533211 11 111111110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 422 GSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 422 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
..+......+.+++.+|++.+|.+|||+.||++.|+.
T Consensus 316 --~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 352 (359)
T 3vhe_A 316 --RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 352 (359)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 1111234578999999999999999999999999975
No 54
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=351.71 Aligned_cols=235 Identities=24% Similarity=0.331 Sum_probs=194.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +++.||||.+.. ++..++|||||+++++|.+....++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57888999999999999999975 588999998742 577889999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-- 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET-- 169 (384)
T ss_dssp CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCC--
Confidence 9999999999999888899999999999999999999999 99999999999999999999999999999775432
Q ss_pred eeecccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccc
Q 039819 344 VTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRE 420 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~---~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 420 (534)
.....+||+.|+|||++.. ..++.++|||||||++|||+||+.||....... ..+.........
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~----~~~~~~~~~~~~--------- 236 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS----SKEIVHTFETTV--------- 236 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC----HHHHHHHHHHCC---------
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc----HHHHHHHHhhcc---------
Confidence 3445679999999999864 458999999999999999999999997433221 111111111110
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCC-hHHHHH
Q 039819 421 LGSNYDRIEVGEILQVALLCTQYLPVHRPK-MSEVVR 456 (534)
Q Consensus 421 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt-~~ev~~ 456 (534)
..++...+..+.+++.+|++.+|.+||+ ++++.+
T Consensus 237 --~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 --VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0112223458899999999999999999 666654
No 55
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=342.20 Aligned_cols=237 Identities=22% Similarity=0.282 Sum_probs=195.8
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------------hhhhhcccCceeeEEEEEeCCCee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------------DMISLAVHRNLLRLIGYCATPTER 259 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------------~~l~~~~h~niv~l~~~~~~~~~~ 259 (534)
.++|...+.||+|+||.||+|+.. ++..||||.+. .++..++||||+++++++.+....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456888999999999999999985 68999999874 156788899999999999999999
Q ss_pred EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC----cEEEEecccce
Q 039819 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAK 335 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~----~~kl~DFGla~ 335 (534)
++||||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 99999999999999998888899999999999999999999999 999999999999999887 89999999998
Q ss_pred ecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccce
Q 039819 336 LLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEV 415 (534)
Q Consensus 336 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||...... +.......... .
T Consensus 167 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~~~~~~~--~ 235 (326)
T 2y0a_A 167 KIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-------ETLANVSAVNY--E 235 (326)
T ss_dssp ECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------HHHHHHHHTCC--C
T ss_pred ECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-------HHHHHHHhcCC--C
Confidence 775432 233456999999999998889999999999999999999999999743211 11111111100 0
Q ss_pred ecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 416 LVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 416 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
....... ..+..+.+++.+|++.+|.+|||+.|+++
T Consensus 236 -~~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 -FEDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp -CCHHHHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -cCccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000001 12347889999999999999999999987
No 56
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.9e-42 Score=340.78 Aligned_cols=249 Identities=21% Similarity=0.269 Sum_probs=190.2
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
++|+..+.||+|+||.||+|+.. +++.||||++. .++..++||||+++++++.+....++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888899999999999999985 68999999885 25778899999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCce
Q 039819 265 YMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344 (534)
Q Consensus 265 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 344 (534)
|++++.+..+......+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 157 (292)
T 3o0g_A 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-C 157 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-C
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-c
Confidence 998644444444567899999999999999999999999 999999999999999999999999999987653322 2
Q ss_pred eeccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh---hcc--cceecc
Q 039819 345 TTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ---EKK--VEVLVD 418 (534)
Q Consensus 345 ~~~~~gt~~y~aPE~~~~~~-~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~d 418 (534)
.....||..|+|||++.+.. ++.++|||||||++|||+||+.||....... ..+......... ... .....+
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD--DQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHH--HHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHHhCCCChhhhhhhccccc
Confidence 34456899999999987765 7999999999999999999988864332211 111111111110 000 000000
Q ss_pred ---------cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 419 ---------RELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 419 ---------~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..............+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000111123457889999999999999999999985
No 57
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-42 Score=358.06 Aligned_cols=263 Identities=24% Similarity=0.372 Sum_probs=189.2
Q ss_pred HHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcc-cCceeeEEEEEeCCC--e
Q 039819 199 QATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAV-HRNLLRLIGYCATPT--E 258 (534)
Q Consensus 199 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~-h~niv~l~~~~~~~~--~ 258 (534)
...++|...+.||+|+||.||+|... +++.||||++.. ++..+. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34678999999999999999999874 689999998741 455665 999999999997654 6
Q ss_pred eEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecC
Q 039819 259 RLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 259 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
.|+|||||+ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 86 ~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 799999998 589888876 4699999999999999999999999 99999999999999999999999999998753
Q ss_pred CC--------------------CCceeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCcccccc
Q 039819 339 HS--------------------DSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQK 397 (534)
Q Consensus 339 ~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~ 397 (534)
.. ........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~ 240 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 21 1112344679999999999876 67899999999999999999999999865433322
Q ss_pred chHHHHHHHHhhhcccce------------------ecccccCCCCC------------HHHHHHHHHHHHHhcccCCCC
Q 039819 398 GAMLEWVKKIQQEKKVEV------------------LVDRELGSNYD------------RIEVGEILQVALLCTQYLPVH 447 (534)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~------------------~~d~~l~~~~~------------~~~~~~l~~l~~~Cl~~~P~~ 447 (534)
..+.......... .+.. .........++ ......+.+++.+|++.||.+
T Consensus 241 ~~i~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~ 319 (388)
T 3oz6_A 241 ERIIGVIDFPSNE-DVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319 (388)
T ss_dssp HHHHHHHCCCCHH-HHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHHhcCCCCHH-HHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence 2221111000000 0000 00000000000 012347889999999999999
Q ss_pred CCChHHHHHHhhcCCchhhHHhhccCCCCCCCCcccCC
Q 039819 448 RPKMSEVVRMLEGDGLAEKWAAAHNHTNPTMNNFHTNT 485 (534)
Q Consensus 448 RPt~~ev~~~L~~~~~~~~~~~~~~~~~p~~~~~~~~~ 485 (534)
|||++|+++ |||+..++...
T Consensus 320 R~t~~e~l~------------------Hp~~~~~~~~~ 339 (388)
T 3oz6_A 320 RISANDALK------------------HPFVSIFHNPN 339 (388)
T ss_dssp SCCHHHHTT------------------STTTTTTCCGG
T ss_pred CCCHHHHhC------------------CHHHHHhcCCc
Confidence 999999874 78877766443
No 58
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4e-42 Score=353.96 Aligned_cols=237 Identities=23% Similarity=0.290 Sum_probs=196.2
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh------------------hhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD------------------MISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~------------------~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
++|...+.||+|+||.||+|+.. +++.||||++.+ +++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 57888999999999999999986 578999998752 24667899999999999999999999
Q ss_pred eeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC
Q 039819 263 YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 342 (534)
|||+++|+|.+++.....+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~- 193 (373)
T 2r5t_A 118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN- 193 (373)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC-
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC-
Confidence 99999999999998878899999999999999999999999 99999999999999999999999999998643222
Q ss_pred ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.... ..+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-------~~~~~~i~~~~-------~~~~ 259 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-------AEMYDNILNKP-------LQLK 259 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-------HHHHHHHHHSC-------CCCC
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhcc-------cCCC
Confidence 234456799999999999998999999999999999999999999974322 11112221110 0111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
.. ....+.+++.+|++.+|.+||++.+.++.+..
T Consensus 260 ~~----~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~ 293 (373)
T 2r5t_A 260 PN----ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKS 293 (373)
T ss_dssp SS----SCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHT
T ss_pred CC----CCHHHHHHHHHHcccCHHhCCCCCCCHHHHhC
Confidence 11 23478899999999999999999765555544
No 59
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.5e-41 Score=343.40 Aligned_cols=230 Identities=23% Similarity=0.301 Sum_probs=195.3
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +++.||||++.. ++..+.||||+++++++.+....++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999985 689999998742 567789999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++|+|.+++.....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~--- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC---
Confidence 9999999999998877899999999999999999999999 9999999999999999999999999999976532
Q ss_pred eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.... ..
T Consensus 195 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~-------~~--- 256 (350)
T 1rdq_E 195 -TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-------IQIYEKIVSGK-------VR--- 256 (350)
T ss_dssp -BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-------CC---
T ss_pred -cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-------HHHHHHHHcCC-------CC---
Confidence 2345799999999999988999999999999999999999999974321 12222222111 01
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCC-----hHHHHH
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRPK-----MSEVVR 456 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RPt-----~~ev~~ 456 (534)
++...+..+.+++.+|++.+|.+||+ ++|+++
T Consensus 257 -~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 257 -FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 11123457899999999999999998 777765
No 60
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=346.54 Aligned_cols=230 Identities=24% Similarity=0.306 Sum_probs=185.1
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
.++|+..+.||+|+||+||+|+.. +++.||||++.. +.....||||++++++|.+....++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 367899999999999999999986 789999998742 22334899999999999999999999
Q ss_pred eeccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 263 YPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
|||+ +++|.+++.. ...++|..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 9999 6788888764 45699999999999999999999999 99999999999999999999999999998765432
Q ss_pred CceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccccc
Q 039819 342 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDREL 421 (534)
Q Consensus 342 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 421 (534)
......||++|+|||++.+ .++.++|||||||++|||++|..|+.... .|. ..... . ..+..
T Consensus 212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~---------~~~-~~~~~-~----~~~~~ 273 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE---------GWQ-QLRQG-Y----LPPEF 273 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH---------HHH-HHTTT-C----CCHHH
T ss_pred --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc---------HHH-HHhcc-C----CCccc
Confidence 2344569999999998865 78999999999999999999987765321 111 11110 0 00111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 422 GSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 422 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.. ..+..+.+++.+|++.+|++|||+.|+++
T Consensus 274 ~~----~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 274 TA----GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cc----CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11 12357899999999999999999999985
No 61
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.3e-42 Score=348.19 Aligned_cols=231 Identities=23% Similarity=0.326 Sum_probs=193.1
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+. .+++.||||++.. ++..++||||+++++++......++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788899999999999999997 5789999998742 567788999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+ +|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 89 E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~-- 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-- 162 (336)
T ss_dssp CCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB--
T ss_pred ECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc--
Confidence 999 789999998878899999999999999999999999 99999999999999999999999999998765432
Q ss_pred eeeccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
.....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||+........ ..+.. ..
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----------------~~i~~--~~ 224 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF----------------KKVNS--CV 224 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB----------------CCCCS--SC
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH----------------HHHHc--CC
Confidence 2344579999999999987776 78999999999999999999999743221110 00000 00
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...+...+..+.+++.+|++.||.+|||++|+++
T Consensus 225 ~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1112223457889999999999999999999975
No 62
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=4e-42 Score=353.19 Aligned_cols=249 Identities=17% Similarity=0.204 Sum_probs=194.5
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECC------CcEEEEEEehh-------------------------hhhhcccCceeeE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGD------GTVLAVKRLKD-------------------------MISLAVHRNLLRL 249 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~-------------------------~l~~~~h~niv~l 249 (534)
.++|...+.||+|+||.||+|.+.. ++.||||++.. .+..+.||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3578888999999999999998864 47899998642 2355679999999
Q ss_pred EEEEeCC----CeeEEEeeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC--C
Q 039819 250 IGYCATP----TERLLVYPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD--D 322 (534)
Q Consensus 250 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~--~ 322 (534)
++++... ...++||||+ +++|.+++... ..+++..++.|+.|++.||.|||+. +|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCC
Confidence 9998764 4579999999 99999999765 6799999999999999999999999 999999999999999 8
Q ss_pred CCcEEEEecccceecCCCCCc------eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccc
Q 039819 323 FCEAIVGDFGLAKLLDHSDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQ 396 (534)
Q Consensus 323 ~~~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~ 396 (534)
++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~-- 267 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD-- 267 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC--
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC--
Confidence 899999999999876432211 113345999999999999988999999999999999999999999742211
Q ss_pred cchHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 397 KGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
.....+..... ...+..++++.+.. ...+.++.+++..|++.+|.+||++.++++.|+.
T Consensus 268 -~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~ 326 (364)
T 3op5_A 268 -PKYVRDSKIRY-RENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQ 326 (364)
T ss_dssp -HHHHHHHHHHH-HHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred -HHHHHHHHHHh-hhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 11111111111 11222233322211 1123578999999999999999999999998875
No 63
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.8e-42 Score=370.07 Aligned_cols=241 Identities=26% Similarity=0.430 Sum_probs=200.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECC-CcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCCeeEEEeecc
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGD-GTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPTERLLVYPYM 266 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~ 266 (534)
.++|...+.||+|+||.||+|++.. +..||||.++. ++..++|||||+++++|......++|||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 4567888999999999999999864 88999998862 678889999999999999999999999999
Q ss_pred CCCChhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCce
Q 039819 267 SNGSVASRLRE--KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344 (534)
Q Consensus 267 ~~gsL~~~l~~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 344 (534)
++|+|.+++.. ...+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.........
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 375 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEEC
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceee
Confidence 99999999975 34699999999999999999999999 99999999999999999999999999999775433222
Q ss_pred eeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 345 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 345 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
.....++..|+|||++....++.++|||||||++|||+| |+.||...... .+.+.+ ... ...
T Consensus 376 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----~~~~~~---~~~----------~~~ 438 (495)
T 1opk_A 376 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELL---EKD----------YRM 438 (495)
T ss_dssp CTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHH---HTT----------CCC
T ss_pred cCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHH---HcC----------CCC
Confidence 333456789999999988899999999999999999999 99999753321 122211 111 111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
..+...+..+.+++.+||+.+|.+|||+.+|++.|+..
T Consensus 439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 12223345889999999999999999999999999875
No 64
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5e-42 Score=340.70 Aligned_cols=247 Identities=20% Similarity=0.315 Sum_probs=189.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
++|...+.||+|+||.||+|+..+++.||||++. +++..++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 4688889999999999999999889999999874 267788999999999999999999999999
Q ss_pred cCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCce
Q 039819 266 MSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344 (534)
Q Consensus 266 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 344 (534)
+++ +|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-K 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-c
Confidence 986 88888875 46799999999999999999999999 999999999999999999999999999987643221 2
Q ss_pred eecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhh---cc--cc--ee
Q 039819 345 TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQE---KK--VE--VL 416 (534)
Q Consensus 345 ~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~--~~--~~ 416 (534)
.....||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ +.......... .. .. ..
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ---LMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHHCCCChhhchhhhcccc
Confidence 234568999999999865 4589999999999999999999999975432211 11111111000 00 00 00
Q ss_pred cccccC-------CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 417 VDRELG-------SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 417 ~d~~l~-------~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.++... ..........+.+++.+|++.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 011110 0011122457889999999999999999999985
No 65
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.2e-41 Score=342.80 Aligned_cols=244 Identities=18% Similarity=0.201 Sum_probs=196.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh------------hhhhhc-ccCceeeEEEEEeCCCeeEEEeeccC
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK------------DMISLA-VHRNLLRLIGYCATPTERLLVYPYMS 267 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~------------~~l~~~-~h~niv~l~~~~~~~~~~~lv~e~~~ 267 (534)
++|...+.||+|+||.||+|+. .+++.||||.+. +++..+ .||||+++++++......++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~- 87 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL- 87 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-
Confidence 5788889999999999999997 578999999875 256777 8999999999999999999999999
Q ss_pred CCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCc-----EEEEecccceecCCCC
Q 039819 268 NGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSD 341 (534)
Q Consensus 268 ~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~-----~kl~DFGla~~~~~~~ 341 (534)
+++|.+++.. ...+++..++.|+.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++......
T Consensus 88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 88 GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 9999999975 46799999999999999999999999 9999999999999998887 9999999999765432
Q ss_pred Cc------eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccce
Q 039819 342 SH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEV 415 (534)
Q Consensus 342 ~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||....... ..+....+........
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~----~~~~~~~i~~~~~~~~ 240 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT----LKERYQKIGDTKRATP 240 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS----HHHHHHHHHHHHHHSC
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc----HHHHHHHHHhhhccCC
Confidence 21 1245679999999999999999999999999999999999999997543211 1111111111100000
Q ss_pred ecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 416 LVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 416 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
...+.. ..+ ++.+++..|++.+|.+||++.+|++.|+.
T Consensus 241 --~~~~~~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~ 278 (330)
T 2izr_A 241 --IEVLCE----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTD 278 (330)
T ss_dssp --HHHHTT----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred --HHHHhc----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 000000 113 88999999999999999999999998874
No 66
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4e-42 Score=347.60 Aligned_cols=240 Identities=25% Similarity=0.430 Sum_probs=190.9
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCc----EEEEEEehh---------------hhhhcccCceeeEEEEEeCCCeeEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGT----VLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
++|...+.||+|+||.||+|+.. ++. .||+|.+.. .+..++||||++++++|. ....++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46788899999999999999974 343 378887641 567789999999999986 456899
Q ss_pred EeeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC
Q 039819 262 VYPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~ 340 (534)
||||+++|+|.+++... ..+++..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999764 5799999999999999999999999 9999999999999999999999999999977543
Q ss_pred CC-ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecc
Q 039819 341 DS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVD 418 (534)
Q Consensus 341 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 418 (534)
.. .......||..|+|||++.+..++.++|||||||++|||+| |+.||...... .+... .......
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~---~~~~~~~----- 236 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA----EVPDL---LEKGERL----- 236 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT----HHHHH---HHTTCBC-----
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH----HHHHH---HHcCCCC-----
Confidence 32 22344567889999999998999999999999999999999 99999753321 11111 1111110
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcCC
Q 039819 419 RELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDG 462 (534)
Q Consensus 419 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 462 (534)
..+...+..+.+++.+||+.+|.+||++.++++.|+...
T Consensus 237 -----~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 237 -----AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp -----CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred -----CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 011112336788999999999999999999999998653
No 67
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5e-42 Score=354.83 Aligned_cols=240 Identities=30% Similarity=0.428 Sum_probs=196.5
Q ss_pred hCCCcCCeeccCCcEEEEEEEE--------CCCcEEEEEEehh---------------hhhhc-ccCceeeEEEEEeCCC
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL--------GDGTVLAVKRLKD---------------MISLA-VHRNLLRLIGYCATPT 257 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~---------------~l~~~-~h~niv~l~~~~~~~~ 257 (534)
++|...+.||+|+||.||+|+. ..+..||||++.. ++..+ +|||||+++++|....
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 5778889999999999999986 2346799998852 45666 8999999999999999
Q ss_pred eeEEEeeccCCCChhhhcccC----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC
Q 039819 258 ERLLVYPYMSNGSVASRLREK----------------PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD 321 (534)
Q Consensus 258 ~~~lv~e~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~ 321 (534)
..++||||+++|+|.+++... ..+++..++.|+.|++.||.|||+. +|+||||||+|||++
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT 225 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEc
Confidence 999999999999999999753 3599999999999999999999999 999999999999999
Q ss_pred CCCcEEEEecccceecCCCCC-ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccch
Q 039819 322 DFCEAIVGDFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGA 399 (534)
Q Consensus 322 ~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~ 399 (534)
.++.+||+|||+++....... .......+|..|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~------ 299 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------ 299 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH------
Confidence 999999999999987654322 22334457889999999999999999999999999999999 9999974321
Q ss_pred HHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 400 MLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
.+........... ..+...+..+.+++.+||+.+|++||++.||++.|+..
T Consensus 300 -~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 300 -EELFKLLKEGHRM----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp -HHHHHHHHTTCCC----------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HHHHHHHHcCCCC----------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1222222221110 11112345789999999999999999999999998763
No 68
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=344.75 Aligned_cols=238 Identities=24% Similarity=0.303 Sum_probs=187.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh------------hhhhhcccCceeeEEEEEeCCCeeEEEeeccC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK------------DMISLAVHRNLLRLIGYCATPTERLLVYPYMS 267 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~ 267 (534)
.++|...+.||+|+||.||+|+.. +++.||||++. +++..++||||++++++|.+....++||||++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 467888999999999999999986 57899999875 26788899999999999999999999999999
Q ss_pred CCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC---CCcEEEEecccceecCCCCCce
Q 039819 268 NGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD---FCEAIVGDFGLAKLLDHSDSHV 344 (534)
Q Consensus 268 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~---~~~~kl~DFGla~~~~~~~~~~ 344 (534)
+|+|.+++.....+++..++.++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++...... .
T Consensus 132 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~ 206 (349)
T 2w4o_A 132 GGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--L 206 (349)
T ss_dssp SCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCccc--c
Confidence 999999998888899999999999999999999999 9999999999999975 8999999999998764322 2
Q ss_pred eeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCC
Q 039819 345 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSN 424 (534)
Q Consensus 345 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 424 (534)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||...... ......+.... . .. ...
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~i~~~~-~-~~-----~~~ 273 (349)
T 2w4o_A 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD------QFMFRRILNCE-Y-YF-----ISP 273 (349)
T ss_dssp ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH------HHHHHHHHTTC-C-CC-----CTT
T ss_pred cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc------HHHHHHHHhCC-C-cc-----CCc
Confidence 33456999999999999889999999999999999999999999643221 01111111111 0 00 001
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 425 YDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 425 ~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.....+..+.+++.+|++.||++|||+.|+++
T Consensus 274 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 274 WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11123457889999999999999999999986
No 69
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=7.9e-42 Score=348.14 Aligned_cols=235 Identities=26% Similarity=0.364 Sum_probs=194.2
Q ss_pred HHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhc-ccCceeeEEEEEeCCCee
Q 039819 199 QATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLA-VHRNLLRLIGYCATPTER 259 (534)
Q Consensus 199 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~-~h~niv~l~~~~~~~~~~ 259 (534)
...++|...+.||+|+||.||+|+.. +++.||||+++. ++... .||||+++++++.+....
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578999999999999999999985 689999998852 23333 899999999999999999
Q ss_pred EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
|+||||+++|+|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 99999999999999998877899999999999999999999999 999999999999999999999999999986432
Q ss_pred CCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.... .
T Consensus 171 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~-------~ 235 (345)
T 1xjd_A 171 GD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-------EELFHSIRMDN-------P 235 (345)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-------C
T ss_pred CC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHHhCC-------C
Confidence 22 224456799999999999998999999999999999999999999974322 11112221111 1
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChH-HHH
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMS-EVV 455 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~-ev~ 455 (534)
.. +......+.+++.+|++.+|++||++. ++.
T Consensus 236 ~~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 236 FY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CC----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CC----CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11 112245788999999999999999997 554
No 70
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.9e-42 Score=347.29 Aligned_cols=239 Identities=25% Similarity=0.405 Sum_probs=190.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCc----EEEEEEeh---------------hhhhhcccCceeeEEEEEeCCCeeEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGT----VLAVKRLK---------------DMISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
++|...+.||+|+||.||+|++. ++. .||+|.+. .++..++||||++++++|.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56888899999999999999864 333 46888764 2677889999999999998764 789
Q ss_pred EeeccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC
Q 039819 262 VYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~ 340 (534)
|+||+++|+|.+++.. ...+++..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 9999999999999975 46799999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc-eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecc
Q 039819 341 DSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVD 418 (534)
Q Consensus 341 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 418 (534)
... ......||..|+|||++.+..++.++|||||||++|||+| |+.||...... .+...+. ...
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~---~~~------- 236 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSILE---KGE------- 236 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHHH---TTC-------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH----HHHHHHH---cCC-------
Confidence 321 2233456889999999999999999999999999999999 99999743321 1111111 111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 419 RELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 419 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
....+...+..+.+++.+||+.+|.+||++.|+++.|+..
T Consensus 237 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 237 ---RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp ---CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred ---CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1111222345789999999999999999999999998764
No 71
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=341.58 Aligned_cols=251 Identities=23% Similarity=0.317 Sum_probs=189.9
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh-------------------h---hhhcccCceeeEEEEEeCC
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD-------------------M---ISLAVHRNLLRLIGYCATP 256 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~-------------------~---l~~~~h~niv~l~~~~~~~ 256 (534)
..++|...+.||+|+||.||+|+. .+++.||||++.. . +..+.||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999997 4789999998741 2 3344599999999999875
Q ss_pred C-----eeEEEeeccCCCChhhhcccCCC--CCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEE
Q 039819 257 T-----ERLLVYPYMSNGSVASRLREKPA--LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVG 329 (534)
Q Consensus 257 ~-----~~~lv~e~~~~gsL~~~l~~~~~--l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~ 329 (534)
. ..++||||+. |+|.+++..... +++..++.|+.|++.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 5 4789999997 599999976543 99999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh
Q 039819 330 DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ 409 (534)
Q Consensus 330 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||...........+.+.......
T Consensus 163 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 163 DFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp SCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999998764332 234567999999999999999999999999999999999999999754432211111111110000
Q ss_pred hccccee--cccccCC--CC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 410 EKKVEVL--VDRELGS--NY-----DRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 410 ~~~~~~~--~d~~l~~--~~-----~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
....... ....... .. .......+.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000000 0000000 00 0112357889999999999999999999985
No 72
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-41 Score=347.13 Aligned_cols=241 Identities=24% Similarity=0.335 Sum_probs=195.0
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE----CCCcEEEEEEehh------------------hhhhc-ccCceeeEEEEEeCCC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKD------------------MISLA-VHRNLLRLIGYCATPT 257 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~------------------~l~~~-~h~niv~l~~~~~~~~ 257 (534)
.++|...+.||+|+||.||+|+. .+++.||||+++. ++..+ .||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36788899999999999999997 4789999998742 45556 5999999999999999
Q ss_pred eeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceec
Q 039819 258 ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337 (534)
Q Consensus 258 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~ 337 (534)
..++||||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 9999999999999999998877899999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeecccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccce
Q 039819 338 DHSDSHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEV 415 (534)
Q Consensus 338 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
............||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ ...+.......
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~----- 281 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS---QAEISRRILKS----- 281 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC---HHHHHHHHHHC-----
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch---HHHHHHHHhcc-----
Confidence 4433333445679999999999975 3478999999999999999999999975432222 12222221111
Q ss_pred ecccccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----ChHHHHHHh
Q 039819 416 LVDRELGSNYDRIEVGEILQVALLCTQYLPVHRP-----KMSEVVRML 458 (534)
Q Consensus 416 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----t~~ev~~~L 458 (534)
.+. ++......+.+++.+|++.||.+|| ++.|+++..
T Consensus 282 --~~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 --EPP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp --CCC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred --CCC----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 011 1222345788999999999999999 888888643
No 73
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.6e-41 Score=336.53 Aligned_cols=245 Identities=17% Similarity=0.190 Sum_probs=196.9
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh------------hhhhc-ccCceeeEEEEEeCCCeeEEEeeccC
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD------------MISLA-VHRNLLRLIGYCATPTERLLVYPYMS 267 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~------------~l~~~-~h~niv~l~~~~~~~~~~~lv~e~~~ 267 (534)
++|...+.||+|+||.||+|+. .+++.||||.+.. .+..+ .|+|++++++++......++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 88 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL- 88 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-
Confidence 5688889999999999999996 5789999998752 45555 7999999999999999999999999
Q ss_pred CCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCc-----EEEEecccceecCCCC
Q 039819 268 NGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-----AIVGDFGLAKLLDHSD 341 (534)
Q Consensus 268 ~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~-----~kl~DFGla~~~~~~~ 341 (534)
+++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++. +||+|||+++......
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 89 GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 99999999854 4699999999999999999999998 9999999999999987776 9999999999775432
Q ss_pred Cc------eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccce
Q 039819 342 SH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEV 415 (534)
Q Consensus 342 ~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||.................. ......
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~-- 242 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK-KQSTPL-- 242 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH-HHHSCH--
T ss_pred ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh-ccCccH--
Confidence 21 234567999999999999989999999999999999999999999754322211111111111 000000
Q ss_pred ecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 416 LVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 416 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
+.+... .+..+.+++.+|++.+|.+||++.+|++.|+.
T Consensus 243 ---~~~~~~----~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~ 280 (298)
T 1csn_A 243 ---RELCAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSK 280 (298)
T ss_dssp ---HHHTTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred ---HHHHhh----CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHH
Confidence 011111 23588999999999999999999999999875
No 74
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.7e-41 Score=346.72 Aligned_cols=239 Identities=21% Similarity=0.282 Sum_probs=196.7
Q ss_pred HHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCeeEE
Q 039819 199 QATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 199 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
...++|...+.||+|+||.||+|... ++..||||++.. ++..++||||+++++++.+....++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34578999999999999999999975 689999998741 5677899999999999999999999
Q ss_pred EeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCC---CcEEEEecccceecC
Q 039819 262 VYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDF---CEAIVGDFGLAKLLD 338 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~---~~~kl~DFGla~~~~ 338 (534)
||||+++|+|.+.+.....+++..+..++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||+++...
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp EECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 999999999999998888899999999999999999999999 99999999999999865 459999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecc
Q 039819 339 HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVD 418 (534)
Q Consensus 339 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 418 (534)
... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+....+.... .. .
T Consensus 183 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-------~~~~~~i~~~~-~~-~-- 249 (362)
T 2bdw_A 183 DSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-------HRLYAQIKAGA-YD-Y-- 249 (362)
T ss_dssp TCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-CC-C--
T ss_pred CCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhCC-CC-C--
Confidence 432 23446799999999999988999999999999999999999999974321 11222221111 00 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 419 RELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 419 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
........+..+.+++.+|++.||.+||++.|+++
T Consensus 250 ---~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 250 ---PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp ---CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000112457889999999999999999999975
No 75
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.7e-41 Score=344.47 Aligned_cols=236 Identities=23% Similarity=0.318 Sum_probs=190.2
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhc-ccCceeeEEEEEeCCCeeEEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLA-VHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~-~h~niv~l~~~~~~~~~~~lv 262 (534)
++|...+.||+|+||.||+|+.. +++.||||++.. ++..+ +||||+++++++.+....++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57888899999999999999985 588999998852 34444 799999999999999999999
Q ss_pred eeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC
Q 039819 263 YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 342 (534)
|||+++|+|.+++.....+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~- 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG- 164 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT-
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC-
Confidence 99999999999998877899999999999999999999999 99999999999999999999999999998643222
Q ss_pred ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCcccccc-chHHHHHHHHhhhcccceeccccc
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQK-GAMLEWVKKIQQEKKVEVLVDREL 421 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l 421 (534)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ................ .
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~- 237 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R- 237 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------C-
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------C-
Confidence 2344567999999999999989999999999999999999999999742211110 0011111111111110 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCh
Q 039819 422 GSNYDRIEVGEILQVALLCTQYLPVHRPKM 451 (534)
Q Consensus 422 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~ 451 (534)
++...+..+.+++.+|++.+|.+||++
T Consensus 238 ---~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 ---IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ---CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 122234578899999999999999996
No 76
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=354.14 Aligned_cols=240 Identities=19% Similarity=0.246 Sum_probs=196.5
Q ss_pred HHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEE
Q 039819 199 QATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 199 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
...++|...+.||+|+||.||+|... +++.||+|.+. +++..++|||||++++++.+....++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 34678999999999999999999874 78999999874 26778899999999999999999999
Q ss_pred EeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC---CCCcEEEEecccceecC
Q 039819 262 VYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD---DFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~---~~~~~kl~DFGla~~~~ 338 (534)
||||+++|+|.+.+.....+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||+++...
T Consensus 88 v~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp EECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 999999999999998888899999999999999999999999 999999999999998 56889999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecc
Q 039819 339 HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVD 418 (534)
Q Consensus 339 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 418 (534)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.... . ....
T Consensus 165 ~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-------~~~~~~i~~~~-~-~~~~ 234 (444)
T 3soa_A 165 GEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-------HRLYQQIKAGA-Y-DFPS 234 (444)
T ss_dssp TTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHTC-C-CCCT
T ss_pred CCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHHhCC-C-CCCc
Confidence 432 223456799999999999988999999999999999999999999964321 11122221111 0 0000
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 419 RELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 419 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+ . ....+..+.+++.+|++.||.+|||+.|+++
T Consensus 235 ~-~----~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 235 P-E----WDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp T-T----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred c-c----cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 0 0112457889999999999999999999986
No 77
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.7e-42 Score=341.87 Aligned_cols=246 Identities=24% Similarity=0.387 Sum_probs=190.9
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-----CCCcEEEEEEehh--------------hhhhcccCceeeEEEEEeCC--CeeE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-----GDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCATP--TERL 260 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~--------------~l~~~~h~niv~l~~~~~~~--~~~~ 260 (534)
++|+..+.||+|+||.||+|++ .+++.||||++.. ++..++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5788889999999999999985 3688999998752 67888999999999998654 4579
Q ss_pred EEeeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 261 LVYPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
+||||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999999999764 3599999999999999999999998 999999999999999999999999999987654
Q ss_pred CCC--ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccc-------c-ccchHH-HHHHHHh
Q 039819 340 SDS--HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSI-------N-QKGAML-EWVKKIQ 408 (534)
Q Consensus 340 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~-------~-~~~~~~-~~~~~~~ 408 (534)
... .......+|..|+|||++.+..++.++|||||||++|||+||..|+...... . ...... .......
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 322 1223345778899999999999999999999999999999999998632110 0 000000 1111111
Q ss_pred hhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 409 QEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 409 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
. ......+...+..+.+++.+||+.+|++|||+.|+++.|+.
T Consensus 247 ~----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 247 N----------NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288 (295)
T ss_dssp T----------TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred c----------cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 1 11111222335689999999999999999999999999875
No 78
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=9.6e-42 Score=335.08 Aligned_cols=238 Identities=26% Similarity=0.413 Sum_probs=185.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh------------------hhhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK------------------DMISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~------------------~~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +..||||++. +++..++||||+++++++.+....++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888899999999999999985 7889999864 2567788999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC--------CCcEEEEecccce
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD--------FCEAIVGDFGLAK 335 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~--------~~~~kl~DFGla~ 335 (534)
||+++++|.+++.. ..+++..++.++.|++.||.|||++...+|+||||||+|||++. ++.+||+|||+++
T Consensus 86 e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 86 EFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp ECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred EcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 99999999998864 46999999999999999999999982222999999999999986 7889999999998
Q ss_pred ecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccce
Q 039819 336 LLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEV 415 (534)
Q Consensus 336 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
...... .....||+.|+|||++.+..++.++||||||+++|||+||+.||...... ..........
T Consensus 165 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~---- 230 (271)
T 3dtc_A 165 EWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-------AVAYGVAMNK---- 230 (271)
T ss_dssp --------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-------HHHHHHHTSC----
T ss_pred cccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHhhhcCC----
Confidence 664332 22456899999999998888999999999999999999999999743211 1111111111
Q ss_pred ecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 416 LVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 416 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
.....+...+..+.+++.+|++.+|.+|||+.|+++.|+.
T Consensus 231 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 231 -----LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred -----CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1111222234578999999999999999999999999874
No 79
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-41 Score=340.61 Aligned_cols=237 Identities=20% Similarity=0.247 Sum_probs=195.8
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-------------hhhhhcccCceeeEEEEEeCCCeeEEEeecc
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATPTERLLVYPYM 266 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~ 266 (534)
.++|...+.||+|+||.||+|+.. ++..||+|.+. .++..++||||+++++++.+.+..++||||+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 367888999999999999999986 58899999874 2678889999999999999999999999999
Q ss_pred CCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC--CCcEEEEecccceecCCCCCc
Q 039819 267 SNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD--FCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 267 ~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~--~~~~kl~DFGla~~~~~~~~~ 343 (534)
++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~-- 158 (321)
T 1tki_A 84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-- 158 (321)
T ss_dssp CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--
Confidence 999999999765 4799999999999999999999999 9999999999999987 7999999999999875432
Q ss_pred eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
......||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+....+...... .+.....
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~---~~~~~~~ 228 (321)
T 1tki_A 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-------QQIIENIMNAEYT---FDEEAFK 228 (321)
T ss_dssp EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTCCC---CCHHHHT
T ss_pred ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-------HHHHHHHHcCCCC---CChhhhc
Confidence 23445699999999999888899999999999999999999999974332 1122222111100 0000001
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..+.++.+++.+|++.||.+|||+.|+++
T Consensus 229 ----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 229 ----EISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp ----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 12357889999999999999999999987
No 80
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-42 Score=355.73 Aligned_cols=240 Identities=29% Similarity=0.420 Sum_probs=194.4
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC------CCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCeeE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG------DGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTERL 260 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~~ 260 (534)
++|...+.||+|+||.||+|++. ++..||||++.. ++..++|||||++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56788899999999999999853 467899999742 567789999999999999999999
Q ss_pred EEeeccCCCChhhhcccC-------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC---cEEEEe
Q 039819 261 LVYPYMSNGSVASRLREK-------PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC---EAIVGD 330 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~~-------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~---~~kl~D 330 (534)
+||||+++|+|.+++... ..+++..++.|+.|++.||.|||++ +|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence 999999999999999643 3599999999999999999999999 999999999999999554 599999
Q ss_pred cccceecCCCC-CceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHh
Q 039819 331 FGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQ 408 (534)
Q Consensus 331 FGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 408 (534)
||+++...... ........||+.|+|||++.+..++.++|||||||++|||+| |+.||..... .+......
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-------~~~~~~i~ 300 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-------QEVLEFVT 300 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHHH
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHH
Confidence 99998542211 112334557899999999998999999999999999999998 9999974321 12222222
Q ss_pred hhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 409 QEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 409 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
.... ...+...+..+.+++.+||+.+|.+||++.+|++.|+..
T Consensus 301 ~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 301 SGGR----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp TTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCC----------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 2111 011222345789999999999999999999999998763
No 81
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.8e-41 Score=345.23 Aligned_cols=229 Identities=25% Similarity=0.325 Sum_probs=190.7
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhc-ccCceeeEEEEEeCCCeeEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLA-VHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~-~h~niv~l~~~~~~~~~~~l 261 (534)
.++|...+.||+|+||.||+|+.. +++.||||++.. ++..+ .||||+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467889999999999999999986 478999998852 33344 79999999999999999999
Q ss_pred EeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 262 VYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
||||+++|+|.+++.....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 999999999999998877899999999999999999999999 99999999999999999999999999998643222
Q ss_pred CceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccccc
Q 039819 342 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDREL 421 (534)
Q Consensus 342 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 421 (534)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.... ..
T Consensus 176 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-------~~~~~~i~~~~-------~~- 239 (353)
T 2i0e_A 176 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-------DELFQSIMEHN-------VA- 239 (353)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-------CC-
T ss_pred -cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhCC-------CC-
Confidence 234456799999999999988999999999999999999999999974321 11222222111 01
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCh
Q 039819 422 GSNYDRIEVGEILQVALLCTQYLPVHRPKM 451 (534)
Q Consensus 422 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~ 451 (534)
++...+..+.+++.+|++.+|.+||++
T Consensus 240 ---~p~~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 240 ---YPKSMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred ---CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 112234578999999999999999965
No 82
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=342.04 Aligned_cols=249 Identities=21% Similarity=0.305 Sum_probs=186.8
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
++|...+.||+|+||.||+|+.. +++.||||++. +++..++||||+++++++......++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888899999999999999986 78999999874 267788999999999999999999999999
Q ss_pred cCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCce
Q 039819 266 MSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344 (534)
Q Consensus 266 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 344 (534)
++ |+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-T 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-c
Confidence 97 588888875 45699999999999999999999999 999999999999999999999999999986543222 2
Q ss_pred eecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecc-----
Q 039819 345 TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVD----- 418 (534)
Q Consensus 345 ~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----- 418 (534)
.....||..|+|||++.+ ..++.++|||||||++|||+||+.||...........+............ .....
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~ 235 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW-PGILSNEEFK 235 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS-TTGGGCHHHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhc-hhhhcchhhc
Confidence 334568999999999876 56899999999999999999999999754432211111111110000000 00000
Q ss_pred ----cccCCC----CCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 419 ----RELGSN----YDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 419 ----~~l~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+..... ........+.+++.+|++.||.+|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000000 00112347889999999999999999999985
No 83
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.5e-42 Score=338.55 Aligned_cols=240 Identities=23% Similarity=0.368 Sum_probs=183.7
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECC----CcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCeeEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGD----GTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
.++|...+.||+|+||.||+|.... +..||||.+.. .+..++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 3578888999999999999998743 45799998652 567788999999999984 466899
Q ss_pred EeeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC
Q 039819 262 VYPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~ 340 (534)
||||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999754 4699999999999999999999999 9999999999999999999999999999877543
Q ss_pred CCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 341 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
.........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .... .+..... .
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~----~~~~---~i~~~~~------~ 236 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIG---RIENGER------L 236 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHH---HHHTTCC------C
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH----HHHH---HHHcCCC------C
Confidence 3323334457789999999988899999999999999999997 99999753321 1111 1111110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
..+...+..+.+++.+|++.+|.+||++.|+++.|+..
T Consensus 237 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 237 ----PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11122345788999999999999999999999998763
No 84
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-42 Score=348.59 Aligned_cols=242 Identities=25% Similarity=0.427 Sum_probs=198.1
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC------CCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCe
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG------DGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTE 258 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~ 258 (534)
..++|...+.||+|+||.||+|+.. +++.||||.+.. ++..++||||++++++|.+...
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578999999999999999999974 348899998752 5778899999999999999999
Q ss_pred eEEEeeccCCCChhhhcccC------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCC
Q 039819 259 RLLVYPYMSNGSVASRLREK------------------------PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVK 314 (534)
Q Consensus 259 ~~lv~e~~~~gsL~~~l~~~------------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlk 314 (534)
.++||||+++|+|.+++... ..+++.+++.|+.|++.||.|||+. +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 99999999999999998752 5699999999999999999999999 99999999
Q ss_pred CCcEEeCCCCcEEEEecccceecCCCCC-ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCc
Q 039819 315 AANVLLDDFCEAIVGDFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGK 392 (534)
Q Consensus 315 p~NiLl~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~ 392 (534)
|+|||++.++.+||+|||+++....... .......||..|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999986543221 12234567899999999988899999999999999999999 999996432
Q ss_pred cccccchHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 393 SINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
. .+......... .. ..+...+..+.+++.+||+.+|.+||++.++++.|+..
T Consensus 282 ~-------~~~~~~~~~~~-~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~ 333 (343)
T 1luf_A 282 H-------EEVIYYVRDGN-IL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333 (343)
T ss_dssp H-------HHHHHHHHTTC-CC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred h-------HHHHHHHhCCC-cC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence 1 11222221111 10 11122345789999999999999999999999999874
No 85
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5.3e-42 Score=362.45 Aligned_cols=240 Identities=27% Similarity=0.385 Sum_probs=192.7
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCCeeEEEeeccC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPTERLLVYPYMS 267 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~ 267 (534)
.++|...+.||+|+||.||+|.+.++..||||+++. ++..++||||+++++++.+ ...++||||++
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 356778889999999999999998888899998862 6788899999999999876 67899999999
Q ss_pred CCChhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCcee
Q 039819 268 NGSVASRLRE--KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT 345 (534)
Q Consensus 268 ~gsL~~~l~~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 345 (534)
+|+|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..........
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 9999999974 35699999999999999999999999 999999999999999999999999999987654332223
Q ss_pred eccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCC
Q 039819 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSN 424 (534)
Q Consensus 346 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 424 (534)
....+|..|+|||++..+.++.++|||||||++|||+| |+.||..... .+.......... ..
T Consensus 339 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-------~~~~~~i~~~~~----------~~ 401 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------REVLDQVERGYR----------MP 401 (452)
T ss_dssp ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTTCC----------CC
T ss_pred cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCC----------CC
Confidence 34457889999999998999999999999999999999 9999974321 112222211111 11
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 425 YDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 425 ~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
.+...+..+.+++.+||+.+|++|||++++++.|+..
T Consensus 402 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~ 438 (452)
T 1fmk_A 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438 (452)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1223345889999999999999999999999999864
No 86
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=9.2e-42 Score=342.39 Aligned_cols=241 Identities=28% Similarity=0.406 Sum_probs=197.3
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE------CCCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL------GDGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTER 259 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~ 259 (534)
.++|...+.||+|+||.||+|+. .++..||||.+.. ++..++||||+++++++.+....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788889999999999999986 3458899998752 56778999999999999999999
Q ss_pred EEEeeccCCCChhhhcccCC------------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCC
Q 039819 260 LLVYPYMSNGSVASRLREKP------------------------ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKA 315 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~------------------------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp 315 (534)
++||||+++|+|.+++.... .+++..++.++.|++.||.|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 99999999999999997543 389999999999999999999999 999999999
Q ss_pred CcEEeCCCCcEEEEecccceecCCCCCc-eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCcc
Q 039819 316 ANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKS 393 (534)
Q Consensus 316 ~NiLl~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~ 393 (534)
+|||++.++.+||+|||+++........ ......+|..|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999877543322 1223457889999999988889999999999999999999 9999974332
Q ss_pred ccccchHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 394 INQKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
. .+...+ ..... ...+...+..+.+++.+|++.+|.+||++.|+++.|+..
T Consensus 259 ~----~~~~~~---~~~~~----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 259 E----RLFNLL---KTGHR----------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp G----GHHHHH---HTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred H----HHHHHh---hcCCc----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1 111111 11110 011122345789999999999999999999999998763
No 87
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.5e-41 Score=358.74 Aligned_cols=235 Identities=27% Similarity=0.392 Sum_probs=193.6
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh------------hhhhcccCceeeEEEEEeCCC-eeEEEeeccC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD------------MISLAVHRNLLRLIGYCATPT-ERLLVYPYMS 267 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~------------~l~~~~h~niv~l~~~~~~~~-~~~lv~e~~~ 267 (534)
.++|...+.||+|+||.||+|++. ++.||||.++. ++..++|||||++++++.+.. ..++|||||+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~ 270 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCT
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecC
Confidence 356788899999999999999985 67999998862 678889999999999987765 6899999999
Q ss_pred CCChhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCcee
Q 039819 268 NGSVASRLREKP--ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT 345 (534)
Q Consensus 268 ~gsL~~~l~~~~--~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 345 (534)
+|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 271 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 343 (450)
T 1k9a_A 271 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----Q 343 (450)
T ss_dssp TCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----c
Confidence 999999997543 479999999999999999999999 9999999999999999999999999999865332 1
Q ss_pred eccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCC
Q 039819 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSN 424 (534)
Q Consensus 346 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 424 (534)
....++..|+|||++.+..++.++|||||||++|||+| |+.||...... .+. ..+..... ..
T Consensus 344 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~----~~~---~~i~~~~~----------~~ 406 (450)
T 1k9a_A 344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DVV---PRVEKGYK----------MD 406 (450)
T ss_dssp ---CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT----THH---HHHHTTCC----------CC
T ss_pred cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH----HHH---HHHHcCCC----------CC
Confidence 22357889999999999999999999999999999999 99999743321 111 11111111 11
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 425 YDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 425 ~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
.+...+..+.+++.+||+.+|.+|||+.++++.|+.
T Consensus 407 ~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~ 442 (450)
T 1k9a_A 407 APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442 (450)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 222335688999999999999999999999999875
No 88
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=346.74 Aligned_cols=242 Identities=28% Similarity=0.424 Sum_probs=197.0
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE------CCCcEEEEEEehh---------------hhhhc-ccCceeeEEEEEeCCCe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL------GDGTVLAVKRLKD---------------MISLA-VHRNLLRLIGYCATPTE 258 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~---------------~l~~~-~h~niv~l~~~~~~~~~ 258 (534)
.++|...+.||+|+||.||+|+. .++..||||.+.. ++..+ .||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 46788889999999999999986 2456899998752 56677 89999999999999999
Q ss_pred eEEEeeccCCCChhhhcccCC-----------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCC
Q 039819 259 RLLVYPYMSNGSVASRLREKP-----------------------ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKA 315 (534)
Q Consensus 259 ~~lv~e~~~~gsL~~~l~~~~-----------------------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp 315 (534)
.++||||+++|+|.+++.... .+++..++.++.|++.||.|||+. +|+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCh
Confidence 999999999999999997542 379999999999999999999999 999999999
Q ss_pred CcEEeCCCCcEEEEecccceecCCCCC-ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCcc
Q 039819 316 ANVLLDDFCEAIVGDFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKS 393 (534)
Q Consensus 316 ~NiLl~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~ 393 (534)
+|||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 999999999999999999987644332 22334557889999999988899999999999999999998 9999975332
Q ss_pred ccccchHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 394 INQKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
. ..+...+ .. . .....+...+..+.+++.+||+.+|.+||++.++++.|+..
T Consensus 281 ~---~~~~~~~---~~-~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 332 (344)
T 1rjb_A 281 D---ANFYKLI---QN-G---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332 (344)
T ss_dssp S---HHHHHHH---HT-T---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred H---HHHHHHH---hc-C---------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 1 1111111 11 1 01111222345889999999999999999999999998763
No 89
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.2e-41 Score=348.93 Aligned_cols=260 Identities=20% Similarity=0.269 Sum_probs=198.4
Q ss_pred ccccCHHHHHHHHhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh-------------hhhhcc-----cCceeeE
Q 039819 189 LRNFTFRELQQATENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD-------------MISLAV-----HRNLLRL 249 (534)
Q Consensus 189 ~~~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~-------------~l~~~~-----h~niv~l 249 (534)
...+++.+.....++|...+.||+|+||.||+|+. .+++.||||++.. ++..+. ||||+++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 34455555555678999999999999999999998 4689999999852 445554 9999999
Q ss_pred EEEEeCCCeeEEEeeccCCCChhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC-----
Q 039819 250 IGYCATPTERLLVYPYMSNGSVASRLREKP--ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD----- 322 (534)
Q Consensus 250 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~----- 322 (534)
++++...+..++||||+ +++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCE
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccc
Confidence 99999999999999999 999999997543 599999999999999999999999 9999999999999975
Q ss_pred --------------------CCcEEEEecccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHH
Q 039819 323 --------------------FCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 382 (534)
Q Consensus 323 --------------------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ell 382 (534)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 789999999999875432 23456899999999999999999999999999999999
Q ss_pred hCCCCcCCCccccccchHHH--------HHHHHhhhcccceeccccc----CCCCC----------------HHHHHHHH
Q 039819 383 TGMRALEFGKSINQKGAMLE--------WVKKIQQEKKVEVLVDREL----GSNYD----------------RIEVGEIL 434 (534)
Q Consensus 383 tG~~p~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~d~~l----~~~~~----------------~~~~~~l~ 434 (534)
||+.||...........+.. +.................. ..... ......+.
T Consensus 254 ~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (360)
T 3llt_A 254 TGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFC 333 (360)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHH
T ss_pred HCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHH
Confidence 99999975432211111111 0000000000000000000 00000 00114678
Q ss_pred HHHHHhcccCCCCCCChHHHHH
Q 039819 435 QVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 435 ~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+++.+|++.||++|||+.|+++
T Consensus 334 ~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 334 DFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHhcCChhhCCCHHHHhc
Confidence 9999999999999999999974
No 90
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.4e-41 Score=354.94 Aligned_cols=234 Identities=23% Similarity=0.284 Sum_probs=194.7
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
.++|...+.||+|+||.||+|+.. +++.||||++.. ++..++||||++++++|...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 367888999999999999999975 689999998752 46677899999999999999999999
Q ss_pred eeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 263 YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHE-QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
|||+++|+|.+++.....+++..+..++.|++.||+|||+ . +||||||||+|||++.++.+||+|||+++......
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 9999999999999888889999999999999999999998 7 89999999999999999999999999998643322
Q ss_pred CceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccccc
Q 039819 342 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDREL 421 (534)
Q Consensus 342 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 421 (534)
......+||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+....+.... ..
T Consensus 304 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~i~~~~-------~~- 367 (446)
T 4ejn_A 304 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------EKLFELILMEE-------IR- 367 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-------CC-
T ss_pred -cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHHhCC-------CC-
Confidence 233456799999999999999999999999999999999999999974321 11111111111 01
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCC-----ChHHHHH
Q 039819 422 GSNYDRIEVGEILQVALLCTQYLPVHRP-----KMSEVVR 456 (534)
Q Consensus 422 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----t~~ev~~ 456 (534)
++......+.+++.+|++.||.+|| +++|+++
T Consensus 368 ---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 368 ---FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1122345789999999999999999 9999886
No 91
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.5e-41 Score=335.36 Aligned_cols=232 Identities=29% Similarity=0.424 Sum_probs=192.0
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-----------------hhhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-----------------DMISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-----------------~~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
.++|...+.||+|+||.||+|+.. ++..||||++. .++..++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467888999999999999999875 57799999874 256778899999999999999999999
Q ss_pred eeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC
Q 039819 263 YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 342 (534)
|||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-- 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc--
Confidence 99999999999998878899999999999999999999998 9999999999999999999999999998654332
Q ss_pred ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
......||..|+|||++.+..++.++||||||+++|||++|+.||..... .+......... .
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~-------~--- 224 (279)
T 3fdn_A 163 -RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-------QETYKRISRVE-------F--- 224 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTC-------C---
T ss_pred -cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-------HHHHHHHHhCC-------C---
Confidence 23345689999999999988899999999999999999999999974321 11111111110 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..+...+..+.+++.+|++.+|.+||++.|+++
T Consensus 225 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 225 -TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp -CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred -CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111223457889999999999999999999986
No 92
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.9e-41 Score=337.00 Aligned_cols=241 Identities=27% Similarity=0.419 Sum_probs=187.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
++|...+.||+|+||.||+|+... .+|||.++ +++..++||||+++++++. .+..++||||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEec
Confidence 578888999999999999998754 47888765 2677889999999999875 4568999999
Q ss_pred cCCCChhhhcc-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC-CCc
Q 039819 266 MSNGSVASRLR-EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS-DSH 343 (534)
Q Consensus 266 ~~~gsL~~~l~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~-~~~ 343 (534)
+++|+|.+++. ....+++..++.|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~ 189 (307)
T 3lb7_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccccc
Confidence 99999999997 456799999999999999999999999 9999999999999999999999999999865431 122
Q ss_pred eeeccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccc
Q 039819 344 VTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRE 420 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 420 (534)
......||+.|+|||++. +..++.++|||||||++|||+||+.||....... .+...+ ..... .+.
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~---~~~~~~---~~~~~-----~~~ 258 (307)
T 3lb7_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD---QIIFMV---GRGYA-----SPD 258 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHH---HHTCC-----CCC
T ss_pred cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH---HHHHHH---hcCCC-----Ccc
Confidence 234457999999999986 5678899999999999999999999997433211 111111 11110 111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 421 LGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 421 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
+. ......+..+.+++.+|++.+|++||++.|+++.|+.
T Consensus 259 ~~-~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~ 297 (307)
T 3lb7_A 259 LS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp ST-TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred hh-hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence 11 1111234578999999999999999999999999875
No 93
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-41 Score=347.34 Aligned_cols=237 Identities=22% Similarity=0.302 Sum_probs=195.3
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------hhhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
.++|...+.||+|+||.||+|... +++.||+|.+. +++..++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 367889999999999999999985 68899999874 267788999999999999999999999999
Q ss_pred cCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC--CCCcEEEEecccceecCCCCC
Q 039819 266 MSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD--DFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 266 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~--~~~~~kl~DFGla~~~~~~~~ 342 (534)
+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++ ..+.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999754 4799999999999999999999999 999999999999997 45789999999999875432
Q ss_pred ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
......||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+.+..+..... ..+....
T Consensus 206 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-------~~~~~~i~~~~~---~~~~~~~ 274 (387)
T 1kob_A 206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-------LETLQNVKRCDW---EFDEDAF 274 (387)
T ss_dssp -CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHHCCC---CCCSSTT
T ss_pred -ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCC---CCCcccc
Confidence 23345699999999999988999999999999999999999999974322 111222111110 0111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
. ..+..+.+++.+|++.||.+|||+.|+++
T Consensus 275 ~----~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 275 S----SVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp T----TSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred c----cCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 1 22457899999999999999999999986
No 94
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=340.52 Aligned_cols=252 Identities=21% Similarity=0.279 Sum_probs=191.0
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
.++|...+.||+|+||.||+|+.. +++.||||++. +++..++||||+++++++......++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 357888999999999999999986 58999999873 2677889999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp ECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 9999999999998888899999999999999999999999 999999999999999999999999999987653322
Q ss_pred eeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHH--------HHHhhhcccc
Q 039819 344 VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWV--------KKIQQEKKVE 414 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 414 (534)
......||..|+|||++.+ ..++.++|||||||++|||+||+.||...........+.... ..........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence 2334568999999999875 568999999999999999999999997544322211111110 0000000000
Q ss_pred --eecccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 415 --VLVDRELGSNY---DRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 415 --~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.+.++...... ....+..+.+++.+|++.||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000000000 0112346889999999999999999999985
No 95
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-41 Score=339.62 Aligned_cols=254 Identities=23% Similarity=0.341 Sum_probs=193.7
Q ss_pred HHHHhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-----------h--hhhcccCceeeEEEEEeCC----CeeE
Q 039819 198 QQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-----------M--ISLAVHRNLLRLIGYCATP----TERL 260 (534)
Q Consensus 198 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-----------~--l~~~~h~niv~l~~~~~~~----~~~~ 260 (534)
....++|...+.||+|+||.||+|+.. ++.||||++.. + ...++||||+++++++... ...+
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 111 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence 345678999999999999999999985 88999998752 2 2234899999999999877 6789
Q ss_pred EEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEeccCCCCcEEeCCCCcEEEEecccce
Q 039819 261 LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC-----DPKIIHRDVKAANVLLDDFCEAIVGDFGLAK 335 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~-----~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~ 335 (534)
+||||+++|+|.++++.. .+++..++.++.|++.||.|||+.+ .++|+||||||+|||++.++.+||+|||+++
T Consensus 112 lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 112 LITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp EEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 999999999999999755 5999999999999999999999752 3489999999999999999999999999998
Q ss_pred ecCCCCCce---eeccccccccccccccccCCCCcc------hhHHHHHHHHHHHHhC----------CCCcCCCccccc
Q 039819 336 LLDHSDSHV---TTAVRGTVGHIAPEYLSTGQSSEK------TDVFGFGILLLELITG----------MRALEFGKSINQ 396 (534)
Q Consensus 336 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~k------~Dv~S~Gvvl~elltG----------~~p~~~~~~~~~ 396 (534)
......... .....||+.|+|||++.+...+.+ +|||||||++|||+|| +.||........
T Consensus 191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~ 270 (337)
T 3mdy_A 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDP 270 (337)
T ss_dssp ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCC
Confidence 764432211 124579999999999987666554 9999999999999999 555543221111
Q ss_pred cchHHHHHHHHhhhcccceecccccCCCC-CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 397 KGAMLEWVKKIQQEKKVEVLVDRELGSNY-DRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
....+.... .... ..+...... ....+..+.+++.+||+.+|.+|||+.||++.|+.
T Consensus 271 --~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 271 --SYEDMREIV-CIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp --CHHHHHHHH-TTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred --chhhhHHHH-hhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 111111111 1111 111111111 12456789999999999999999999999999875
No 96
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7.9e-42 Score=334.78 Aligned_cols=239 Identities=26% Similarity=0.411 Sum_probs=198.1
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCCeeEEEeeccCC
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPTERLLVYPYMSN 268 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~~ 268 (534)
++|...+.||+|+||.||+|...++..||||.+.. .+..++||||+++++++.+....++||||+++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 56778899999999999999998889999998862 57788999999999999999999999999999
Q ss_pred CChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCceeec
Q 039819 269 GSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA 347 (534)
Q Consensus 269 gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~ 347 (534)
++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++............
T Consensus 88 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 164 (267)
T 3t9t_A 88 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164 (267)
T ss_dssp CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence 9999999754 5689999999999999999999999 99999999999999999999999999998764322112233
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCC
Q 039819 348 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYD 426 (534)
Q Consensus 348 ~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 426 (534)
..+|..|+|||++.+..++.++||||||+++|||+| |+.||..... .+.......... . ..+
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~i~~~~~------~----~~~ 227 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-------SEVVEDISTGFR------L----YKP 227 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTCC------C----CCC
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-------HHHHHHHhcCCc------C----CCC
Confidence 457789999999988889999999999999999999 8999874321 112222211110 0 111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 427 RIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 427 ~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
...+..+.+++.+|++.+|.+||++.++++.|+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (267)
T 3t9t_A 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261 (267)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1224578999999999999999999999999875
No 97
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.5e-41 Score=335.27 Aligned_cols=239 Identities=30% Similarity=0.459 Sum_probs=197.1
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCCeeEEEeeccC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPTERLLVYPYMS 267 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~ 267 (534)
.++|...+.||+|+||.||+|+..++..||||.+.. ++..++||||+++++++.. +..++||||++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 90 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME 90 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCC
Confidence 357888899999999999999998888999998852 6778899999999999864 56899999999
Q ss_pred CCChhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCcee
Q 039819 268 NGSVASRLREKP--ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT 345 (534)
Q Consensus 268 ~gsL~~~l~~~~--~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 345 (534)
+++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 167 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc
Confidence 999999997543 699999999999999999999999 999999999999999999999999999998754432223
Q ss_pred eccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCC
Q 039819 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSN 424 (534)
Q Consensus 346 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 424 (534)
....++..|+|||++.+..++.++|||||||++|||+| |+.||..... .+.......... . .
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~~~------~----~ 230 (279)
T 1qpc_A 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-------PEVIQNLERGYR------M----V 230 (279)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTTCC------C----C
T ss_pred cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-------HHHHHHHhcccC------C----C
Confidence 34457889999999988889999999999999999999 9999974321 111222211110 0 1
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 425 YDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 425 ~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
.+...+..+.+++.+|++.+|++|||+.++++.|+.
T Consensus 231 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 266 (279)
T 1qpc_A 231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (279)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 111234588999999999999999999999999876
No 98
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.3e-41 Score=341.23 Aligned_cols=240 Identities=27% Similarity=0.412 Sum_probs=196.4
Q ss_pred hCCCcCCeeccCCcEEEEEEEE------CCCcEEEEEEehh---------------hhhhc-ccCceeeEEEEEeCCCee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL------GDGTVLAVKRLKD---------------MISLA-VHRNLLRLIGYCATPTER 259 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~---------------~l~~~-~h~niv~l~~~~~~~~~~ 259 (534)
++|...+.||+|+||.||+|+. .+++.||||++.. .+..+ +||||+++++++...+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 5788889999999999999985 3568899998752 56666 899999999999999999
Q ss_pred EEEeeccCCCChhhhcccCC------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC
Q 039819 260 LLVYPYMSNGSVASRLREKP------------------ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD 321 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~------------------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~ 321 (534)
++||||+++|+|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+|||++
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLT 179 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEc
Confidence 99999999999999997543 489999999999999999999999 999999999999999
Q ss_pred CCCcEEEEecccceecCCCCCc-eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccch
Q 039819 322 DFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGA 399 (534)
Q Consensus 322 ~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~ 399 (534)
.++.+||+|||+++........ ......||..|+|||++.+..++.++|||||||++|||+| |+.||...... ..
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~ 256 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---SK 256 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS---HH
T ss_pred CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch---hH
Confidence 9999999999999877544322 2234457889999999988899999999999999999999 99999743321 11
Q ss_pred HHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 400 MLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
....+ .... .. ..+...+..+.+++.+|++.+|.+|||+.|+++.|+.
T Consensus 257 ~~~~~---~~~~------~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 257 FYKMI---KEGF------RM----LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp HHHHH---HHTC------CC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHh---ccCC------CC----CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 11111 1110 00 1111224578999999999999999999999999875
No 99
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.3e-41 Score=341.83 Aligned_cols=235 Identities=20% Similarity=0.333 Sum_probs=186.8
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCCC------
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATPT------ 257 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~------ 257 (534)
..++|+..+.||+|+||.||+|+.. +++.||||++. +++..++||||++++++|.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 4567899999999999999999986 78999999875 2678889999999999986543
Q ss_pred ---------------------------------------------------eeEEEeeccCCCChhhhcccCC---CCCH
Q 039819 258 ---------------------------------------------------ERLLVYPYMSNGSVASRLREKP---ALDW 283 (534)
Q Consensus 258 ---------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~---~l~~ 283 (534)
..++||||+++|+|.+++.... ..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 2799999999999999997543 3567
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC-----------ceeecccccc
Q 039819 284 NTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS-----------HVTTAVRGTV 352 (534)
Q Consensus 284 ~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~-----------~~~~~~~gt~ 352 (534)
..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 78999999999999999999 999999999999999999999999999998754321 1223456999
Q ss_pred ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCCHHHHHH
Q 039819 353 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGE 432 (534)
Q Consensus 353 ~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 432 (534)
.|+|||++.+..++.++|||||||++|||++|..|+.. ........... .. ..........
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~---------~~~~~~~~~~~-~~---------~~~~~~~~~~ 301 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME---------RVRIITDVRNL-KF---------PLLFTQKYPQ 301 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH---------HHHHHHHHHTT-CC---------CHHHHHHCHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH---------HHHHHHHhhcc-CC---------CcccccCChh
Confidence 99999999998999999999999999999999776531 01111111110 00 0011222356
Q ss_pred HHHHHHHhcccCCCCCCChHHHHH
Q 039819 433 ILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 433 l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+.+++.+|++.+|.+|||+.|+++
T Consensus 302 ~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 302 EHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCCCHHHHhh
Confidence 789999999999999999999986
No 100
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.5e-41 Score=346.95 Aligned_cols=239 Identities=23% Similarity=0.268 Sum_probs=185.2
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCCeeEEEeecc
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPTERLLVYPYM 266 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~ 266 (534)
.++|...+.||+|+||.||+++.. +++.||||++.. .+..++||||+++++++.+....++||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 357888899999999999999986 789999998852 577889999999999999999999999999
Q ss_pred CCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCc--EEEEecccceecCCCCCce
Q 039819 267 SNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCE--AIVGDFGLAKLLDHSDSHV 344 (534)
Q Consensus 267 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~--~kl~DFGla~~~~~~~~~~ 344 (534)
++|+|.+++...+.+++..++.++.|++.||.|||+. +|+||||||+|||++.++. +||+|||+++...... .
T Consensus 99 ~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~--~ 173 (361)
T 3uc3_A 99 SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--Q 173 (361)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccC--C
Confidence 9999999998877899999999999999999999998 9999999999999987765 9999999998543221 2
Q ss_pred eeccccccccccccccccCCCCcc-hhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 345 TTAVRGTVGHIAPEYLSTGQSSEK-TDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 345 ~~~~~gt~~y~aPE~~~~~~~~~k-~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
.....||+.|+|||++.+..++.+ +|||||||++|||++|+.||........ ............. ....
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~~~~~~~~~~~~~-------~~~~ 243 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD---YRKTIQRILSVKY-------SIPD 243 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC---HHHHHHHHHTTCC-------CCCT
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH---HHHHHHHHhcCCC-------CCCC
Confidence 334569999999999988777655 8999999999999999999975433221 1122222111110 0000
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
....+..+.+++.+|++.+|.+|||+.|+++
T Consensus 244 --~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 244 --DIRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp --TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred --cCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 0012347889999999999999999999986
No 101
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.7e-41 Score=341.99 Aligned_cols=233 Identities=25% Similarity=0.329 Sum_probs=190.2
Q ss_pred hCCCcCCeeccCCcEEEEEEEE----CCCcEEEEEEehh------------------hhhhcccCceeeEEEEEeCCCee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL----GDGTVLAVKRLKD------------------MISLAVHRNLLRLIGYCATPTER 259 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~------------------~l~~~~h~niv~l~~~~~~~~~~ 259 (534)
++|...+.||+|+||.||+|+. .+++.||||+++. ++..++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 5788899999999999999987 4789999998742 57788999999999999999999
Q ss_pred EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
++||||+++|+|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 97 YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 99999999999999998878899999999999999999999999 999999999999999999999999999986433
Q ss_pred CCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.... .
T Consensus 174 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~~-------~ 238 (327)
T 3a62_A 174 DG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-------KKTIDKILKCK-------L 238 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHTC-------C
T ss_pred CC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhCC-------C
Confidence 22 223456799999999999988899999999999999999999999974332 11112111110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCC-----ChHHHHH
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRP-----KMSEVVR 456 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----t~~ev~~ 456 (534)
. .+......+.+++.+|++.+|.+|| ++.|+++
T Consensus 239 ~----~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 N----LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp C----CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred C----CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1 1112245789999999999999999 5667665
No 102
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.7e-42 Score=348.67 Aligned_cols=235 Identities=22% Similarity=0.313 Sum_probs=186.0
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh----------------hhhhhccc--CceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAVH--RNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~----------------~~l~~~~h--~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|...+++.||||++. .++..+.| +||+++++++......++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 4688889999999999999999899999999874 14566666 99999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC-
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS- 342 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~- 342 (534)
| +.+|+|.+++.....+++.++..|+.|++.||.|||+. +|+||||||+|||++ ++.+||+|||+++.......
T Consensus 89 e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp C-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred e-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 9 56889999999888899999999999999999999999 999999999999997 57899999999987654322
Q ss_pred ceeecccccccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhc
Q 039819 343 HVTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEK 411 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~-----------~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 411 (534)
.......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ..... ...
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~-~~~---- 233 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKL-HAI---- 233 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHH-HHH----
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-----HHHHH-HHH----
Confidence 12335679999999999864 6789999999999999999999999963221 11111 111
Q ss_pred ccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 412 KVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 412 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+++.....++......+.+++.+||+.+|.+|||+.|+++
T Consensus 234 -----~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 234 -----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp -----HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -----hcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 1111111222222357889999999999999999999986
No 103
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.5e-41 Score=349.69 Aligned_cols=240 Identities=20% Similarity=0.276 Sum_probs=184.5
Q ss_pred hCCCcC-CeeccCCcEEEEEEEEC-CCcEEEEEEehh----------hhhhcccCceeeEEEEEeC----CCeeEEEeec
Q 039819 202 ENFSSK-NILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------MISLAVHRNLLRLIGYCAT----PTERLLVYPY 265 (534)
Q Consensus 202 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------~l~~~~h~niv~l~~~~~~----~~~~~lv~e~ 265 (534)
++|... +.||+|+||.||+|... +++.||||++.. .....+||||+++++++.. ....++||||
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~ 140 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 140 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEe
Confidence 456555 68999999999999975 689999999852 2345689999999999865 5568999999
Q ss_pred cCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC---CCcEEEEecccceecCCC
Q 039819 266 MSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD---FCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 266 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~---~~~~kl~DFGla~~~~~~ 340 (534)
|++|+|.+++... ..+++..+..|+.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 141 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 141 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp CCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 9999999999764 3599999999999999999999998 9999999999999997 789999999999876432
Q ss_pred CCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccc
Q 039819 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRE 420 (534)
Q Consensus 341 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 420 (534)
. .....+||+.|+|||++.+..++.++|||||||++|||+||+.||...........+...+. . .... +..+
T Consensus 218 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~---~-~~~~-~~~~- 289 (400)
T 1nxk_A 218 N--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---M-GQYE-FPNP- 289 (400)
T ss_dssp -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH---H-TCCC-CCTT-
T ss_pred C--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH---c-Cccc-CCCc-
Confidence 2 23456789999999999999999999999999999999999999975433221111211111 1 1000 0000
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 421 LGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 421 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.......++.+++.+||+.||.+|||+.|+++
T Consensus 290 ----~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 290 ----EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp ----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00112457899999999999999999999987
No 104
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.2e-41 Score=344.66 Aligned_cols=242 Identities=21% Similarity=0.292 Sum_probs=195.4
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------hhhhc-ccCceeeEEEEEeCCCeeEEEeeccC
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------MISLA-VHRNLLRLIGYCATPTERLLVYPYMS 267 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------~l~~~-~h~niv~l~~~~~~~~~~~lv~e~~~ 267 (534)
..++|...+.||+|+||.||+|+.. +++.||||++.+ ++.++ .||||+++++++.+....++||||++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~ 99 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK 99 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC
Confidence 4577999999999999999999985 688999999853 34444 79999999999999999999999999
Q ss_pred CCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCC----CcEEEEecccceecCCCCCc
Q 039819 268 NGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDF----CEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 268 ~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~----~~~kl~DFGla~~~~~~~~~ 343 (534)
+|+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||+... +.+||+|||+++.......
T Consensus 100 gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~- 175 (342)
T 2qr7_A 100 GGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG- 175 (342)
T ss_dssp SCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC-
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC-
Confidence 999999998888899999999999999999999999 99999999999998433 3599999999997654332
Q ss_pred eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+....+.... . ....
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~~~~i~~~~-~------~~~~ 244 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD----TPEEILARIGSGK-F------SLSG 244 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS----CHHHHHHHHHHCC-C------CCCS
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC----CHHHHHHHHccCC-c------ccCc
Confidence 234567899999999998878899999999999999999999999743221 1122222222211 0 0111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
......+..+.+++.+|++.||++||++.|+++
T Consensus 245 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 245 GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111223457889999999999999999999875
No 105
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=344.97 Aligned_cols=250 Identities=18% Similarity=0.181 Sum_probs=189.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC----CCcEEEEEEehh-------------------------hhhhcccCceeeEEEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG----DGTVLAVKRLKD-------------------------MISLAVHRNLLRLIGY 252 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~-------------------------~l~~~~h~niv~l~~~ 252 (534)
++|...+.||+|+||.||+|+.. .+..||||.+.. .+..+.||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56788899999999999999985 578899998742 2455689999999999
Q ss_pred EeC----CCeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC--cE
Q 039819 253 CAT----PTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC--EA 326 (534)
Q Consensus 253 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~--~~ 326 (534)
+.. ....++||||+ +++|.+++.....+++..++.|+.|++.||.|||+. +|+||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcE
Confidence 987 67889999999 999999998777899999999999999999999999 999999999999999877 99
Q ss_pred EEEecccceecCCCCC------ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchH
Q 039819 327 IVGDFGLAKLLDHSDS------HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAM 400 (534)
Q Consensus 327 kl~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~ 400 (534)
||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||+||+.||...... ....
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~ 270 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD--PVAV 270 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC--HHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc--cHHH
Confidence 9999999987643211 1113457999999999999888999999999999999999999999632111 0011
Q ss_pred HHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcCC
Q 039819 401 LEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDG 462 (534)
Q Consensus 401 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 462 (534)
......... .....+..... ....+..+.+++.+|++.+|++||++.+|++.|+...
T Consensus 271 ~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 271 QTAKTNLLD--ELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHH--TTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHhhcc--cccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 111111110 00000000000 0012348899999999999999999999999998744
No 106
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.9e-41 Score=362.12 Aligned_cols=237 Identities=24% Similarity=0.331 Sum_probs=195.6
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
.++|...+.||+|+||.||+|+.. +|+.||||++.. ++..++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467888999999999999999985 689999998742 57788999999999999999999999
Q ss_pred eeccCCCChhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC
Q 039819 263 YPYMSNGSVASRLREKP--ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~ 340 (534)
|||+++|+|.+++.... .+++..++.++.||+.||.|||++ +||||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999987543 499999999999999999999999 9999999999999999999999999999877543
Q ss_pred CCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccc
Q 039819 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRE 420 (534)
Q Consensus 341 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 420 (534)
. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...........+...+ ... . .
T Consensus 340 ~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i---~~~-~------~- 406 (576)
T 2acx_A 340 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV---KEV-P------E- 406 (576)
T ss_dssp C--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHH---HHC-C------C-
T ss_pred c--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHh---hcc-c------c-
Confidence 2 2344579999999999998889999999999999999999999997543221111111111 110 0 1
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCC-----ChHHHHH
Q 039819 421 LGSNYDRIEVGEILQVALLCTQYLPVHRP-----KMSEVVR 456 (534)
Q Consensus 421 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----t~~ev~~ 456 (534)
.++...+..+.+++.+|++.||.+|| +++||++
T Consensus 407 ---~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 407 ---EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ---cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11122345889999999999999999 5677764
No 107
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5.1e-41 Score=348.05 Aligned_cols=253 Identities=18% Similarity=0.224 Sum_probs=191.8
Q ss_pred HhCCCcCCeeccC--CcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCeeEE
Q 039819 201 TENFSSKNILGAG--GFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 201 ~~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
.++|...+.||+| +||.||+|+.. +++.||||++.. +++.++|||||++++++.+....++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3578889999999 99999999986 689999998852 5778899999999999999999999
Q ss_pred EeeccCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 262 VYPYMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
|||||++|+|.+++... ..+++..+..|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999754 6799999999999999999999999 999999999999999999999999999875422
Q ss_pred CC------Cceeecccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHH-HHHHHhh-
Q 039819 340 SD------SHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE-WVKKIQQ- 409 (534)
Q Consensus 340 ~~------~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~- 409 (534)
.. ........||..|+|||++.+ ..++.++|||||||++|||+||+.||.............. .......
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 11 111223468999999999977 5789999999999999999999999975432211100000 0000000
Q ss_pred -----h------------cccceecc---cc------cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 410 -----E------------KKVEVLVD---RE------LGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 410 -----~------------~~~~~~~d---~~------l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
. ......+. +. ............+.+++.+||+.||++|||+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0 00000000 00 000111223457899999999999999999999985
No 108
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1e-41 Score=337.93 Aligned_cols=242 Identities=26% Similarity=0.416 Sum_probs=201.7
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-------------hhhhhcccCceeeEEEEEeCCCeeEEEeecc
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-------------DMISLAVHRNLLRLIGYCATPTERLLVYPYM 266 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~ 266 (534)
.++|...+.||+|+||.||+|... ++..||||.+. +++..++||||+++++++.+....++||||+
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence 467888899999999999999986 48889999875 2678889999999999999999999999999
Q ss_pred CCCChhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCce
Q 039819 267 SNGSVASRLRE--KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344 (534)
Q Consensus 267 ~~gsL~~~l~~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 344 (534)
++++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 168 (288)
T 3kfa_A 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168 (288)
T ss_dssp TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEE
T ss_pred CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcccc
Confidence 99999999975 34599999999999999999999999 99999999999999999999999999998776544444
Q ss_pred eeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 345 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 345 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
.....+|..|+|||++.+..++.++||||||+++|||++ |+.||...... .+.+.+ ... ...
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~----~~~~~~---~~~----------~~~ 231 (288)
T 3kfa_A 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----QVYELL---EKD----------YRM 231 (288)
T ss_dssp ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHHHH---HTT----------CCC
T ss_pred ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH---hcc----------CCC
Confidence 445567889999999998899999999999999999999 99999743321 111111 111 011
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcCC
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDG 462 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 462 (534)
..+...+..+.+++.+|++.+|.+||++.++++.|+...
T Consensus 232 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 232 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 112223457899999999999999999999999988643
No 109
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.3e-41 Score=330.69 Aligned_cols=233 Identities=23% Similarity=0.351 Sum_probs=190.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCC--CeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATP--TERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~--~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +..||||++. .++..++||||+++++++.+. ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 57888899999999999999985 8889999875 256778899999999999887 6789999
Q ss_pred eccCCCChhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 264 PYMSNGSVASRLREKP--ALDWNTRKRIAIGAARGLLYLHEQCDPK--IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
||+++|+|.+++.... .+++..++.|+.|++.||.|||+. + |+||||||+|||++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 9999999999998654 589999999999999999999998 7 99999999999999999999999998764322
Q ss_pred CCCceeeccccccccccccccccCCCCc---chhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhccccee
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSE---KTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVL 416 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~---k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (534)
....||+.|+|||++.+..++. ++|||||||++|||+||+.||...... +..........
T Consensus 166 ------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~---- 228 (271)
T 3kmu_A 166 ------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-------EIGMKVALEGL---- 228 (271)
T ss_dssp ------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH-------HHHHHHHHSCC----
T ss_pred ------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH-------HHHHHHHhcCC----
Confidence 2345899999999997765544 899999999999999999999743211 11111111110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 417 VDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 417 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
.+. .+...+..+.+++.+|++.+|++|||+.|+++.|+.
T Consensus 229 -~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 229 -RPT----IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267 (271)
T ss_dssp -CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -CCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111 122234578999999999999999999999999875
No 110
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=342.11 Aligned_cols=235 Identities=16% Similarity=0.175 Sum_probs=190.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEE------ECCCcEEEEEEehh-----------hhhhc---ccCceeeEEEEEeCCCeeE
Q 039819 201 TENFSSKNILGAGGFGNVYKGK------LGDGTVLAVKRLKD-----------MISLA---VHRNLLRLIGYCATPTERL 260 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~-----------~l~~~---~h~niv~l~~~~~~~~~~~ 260 (534)
.++|...+.||+|+||.||+|. ..+++.||||++.. .+..+ .|+||+++++++...+..+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~ 143 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV 143 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcE
Confidence 3678888999999999999994 45688999999862 33333 4999999999999999999
Q ss_pred EEeeccCCCChhhhcc-----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC-----------CC
Q 039819 261 LVYPYMSNGSVASRLR-----EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD-----------FC 324 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~-----~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~-----------~~ 324 (534)
+|||||++|+|.+++. ....+++..++.|+.|++.||+|||+. +||||||||+|||++. ++
T Consensus 144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CT
T ss_pred EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccC
Confidence 9999999999999996 356799999999999999999999998 9999999999999998 89
Q ss_pred cEEEEecccceecCC-CCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHH
Q 039819 325 EAIVGDFGLAKLLDH-SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW 403 (534)
Q Consensus 325 ~~kl~DFGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~ 403 (534)
.+||+|||+++.+.. .........+||++|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------- 292 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-------- 292 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE--------
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc--------
Confidence 999999999986542 22334456779999999999999899999999999999999999999986322110
Q ss_pred HHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCC-CChHHHHHHhhc
Q 039819 404 VKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHR-PKMSEVVRMLEG 460 (534)
Q Consensus 404 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R-Pt~~ev~~~L~~ 460 (534)
. .....+.... ....+.+++..|++.+|.+| |+++++.+.|+.
T Consensus 293 -------~----~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~ 336 (365)
T 3e7e_A 293 -------C----KPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK 336 (365)
T ss_dssp -------E----EECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred -------e----eechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence 0 0111111111 24467789999999999998 567777777764
No 111
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.9e-41 Score=339.71 Aligned_cols=229 Identities=21% Similarity=0.290 Sum_probs=194.4
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh----------------------hhhhhcccCceeeEEEEEeCC
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK----------------------DMISLAVHRNLLRLIGYCATP 256 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~----------------------~~l~~~~h~niv~l~~~~~~~ 256 (534)
..++|...+.||+|+||.||+|+. .+++.||||++. .++..++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 457899999999999999999986 468899999764 256778999999999999999
Q ss_pred CeeEEEeeccCCC-ChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccce
Q 039819 257 TERLLVYPYMSNG-SVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK 335 (534)
Q Consensus 257 ~~~~lv~e~~~~g-sL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~ 335 (534)
...++||||+.+| +|.+++.....+++..+..|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 9999999999777 9999999888899999999999999999999999 99999999999999999999999999999
Q ss_pred ecCCCCCceeeccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccc
Q 039819 336 LLDHSDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVE 414 (534)
Q Consensus 336 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (534)
....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .
T Consensus 179 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------~- 237 (335)
T 3dls_A 179 YLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------V- 237 (335)
T ss_dssp ECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------------T-
T ss_pred ECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------------H-
Confidence 8754332 334569999999999988776 88999999999999999999999631110 0
Q ss_pred eecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 039819 415 VLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRM 457 (534)
Q Consensus 415 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~ 457 (534)
..... .+...+..+.+++.+|++.+|.+|||+.|+++.
T Consensus 238 ---~~~~~--~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 ---EAAIH--PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---TTCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---hhccC--CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 011123478999999999999999999999873
No 112
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.3e-41 Score=333.89 Aligned_cols=234 Identities=24% Similarity=0.339 Sum_probs=187.0
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------------------------------hhhhh
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------------------------------DMISL 240 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------------------------------~~l~~ 240 (534)
++|...+.||+|+||.||+|+.. +++.||||++. +++..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57888899999999999999975 68899999862 25677
Q ss_pred cccCceeeEEEEEeC--CCeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcE
Q 039819 241 AVHRNLLRLIGYCAT--PTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANV 318 (534)
Q Consensus 241 ~~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~Ni 318 (534)
++||||+++++++.+ ....++||||+++|+|.+++.. ..+++..++.++.|++.||.|||+. +|+||||||+||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL 168 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence 889999999999987 5678999999999999887654 4699999999999999999999999 999999999999
Q ss_pred EeCCCCcEEEEecccceecCCCCCceeeccccccccccccccccCC---CCcchhHHHHHHHHHHHHhCCCCcCCCcccc
Q 039819 319 LLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELITGMRALEFGKSIN 395 (534)
Q Consensus 319 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~ 395 (534)
|++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--- 244 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER--- 244 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS---
T ss_pred EECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc---
Confidence 999999999999999987754332 234457999999999997655 3788999999999999999999996432
Q ss_pred ccchHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 396 QKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...+....... ... . + . ....+..+.+++.+|++.||++||++.|+++
T Consensus 245 ----~~~~~~~~~~~-~~~-~--~-~----~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 ----IMCLHSKIKSQ-ALE-F--P-D----QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp ----HHHHHHHHHHC-CCC-C--C-S----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----HHHHHHHHhcc-cCC-C--C-C----ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 11222222111 100 0 0 0 0112347899999999999999999999874
No 113
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.5e-40 Score=339.92 Aligned_cols=237 Identities=22% Similarity=0.288 Sum_probs=192.1
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-------------------hhhhhcccCceeeEEEEEeCCCeeE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-------------------DMISLAVHRNLLRLIGYCATPTERL 260 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-------------------~~l~~~~h~niv~l~~~~~~~~~~~ 260 (534)
.+.|...+.||+|+||.||+|... +++.||||++. .++..++||||+++++++.+....+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 457889999999999999999875 68999999873 1567788999999999999999999
Q ss_pred EEeeccCCCChhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCc---EEEEeccc
Q 039819 261 LVYPYMSNGSVASRLRE----KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCE---AIVGDFGL 333 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~---~kl~DFGl 333 (534)
+||||+++|+|.+.+.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999887753 34589999999999999999999999 9999999999999986554 99999999
Q ss_pred ceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhccc
Q 039819 334 AKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKV 413 (534)
Q Consensus 334 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (534)
++...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||..... +....+.....
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~i~~~~~- 249 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--------RLFEGIIKGKY- 249 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--------HHHHHHHHTCC-
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--------HHHHHHHcCCC-
Confidence 98875432 223445799999999999988999999999999999999999999974321 11111111110
Q ss_pred ceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 414 EVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 414 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
. ..+..... .+..+.+++.+|++.||++|||+.|+++
T Consensus 250 ~--~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 250 K--MNPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp C--CCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred C--CCcccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 00000011 2357889999999999999999999986
No 114
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.9e-41 Score=343.23 Aligned_cols=248 Identities=19% Similarity=0.284 Sum_probs=187.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
.++|...+.||+|+||.||+|+.. +++.||||++. +++..++||||+++++++.+....++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 467889999999999999999865 78999999874 2678889999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe-----CCCCcEEEEecccceecC
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL-----DDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl-----~~~~~~kl~DFGla~~~~ 338 (534)
||++ |+|.+++.....+++..++.|+.|++.||.|||+. +|+||||||+|||+ +..+.+||+|||+++...
T Consensus 113 e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 113 EYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp ECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred ecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 9998 49999998888899999999999999999999999 99999999999999 455669999999998765
Q ss_pred CCCCceeeccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhc--cc--
Q 039819 339 HSDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEK--KV-- 413 (534)
Q Consensus 339 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~-- 413 (534)
.... ......||..|+|||++.+. .++.++|||||||++|||++|+.||........ +........... ..
T Consensus 189 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~ 264 (329)
T 3gbz_A 189 IPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ---LFKIFEVLGLPDDTTWPG 264 (329)
T ss_dssp ------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCTTTSTT
T ss_pred Cccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH---HHHHHHHhCCCchhhhhh
Confidence 3322 23345689999999999764 489999999999999999999999975433211 111111110000 00
Q ss_pred ----ceec--ccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 414 ----EVLV--DRELGSNY-----DRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 414 ----~~~~--d~~l~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.... .+...... .......+.+++.+|++.||.+|||+.|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 00000000 0112357889999999999999999999985
No 115
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.4e-41 Score=342.02 Aligned_cols=241 Identities=29% Similarity=0.435 Sum_probs=195.6
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC--------CCcEEEEEEehh---------------hhhhc-ccCceeeEEEEEeCC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG--------DGTVLAVKRLKD---------------MISLA-VHRNLLRLIGYCATP 256 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~---------------~l~~~-~h~niv~l~~~~~~~ 256 (534)
.++|...+.||+|+||.||+|+.. ++..||||++.. ++..+ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 367888899999999999999863 467899998852 45566 899999999999999
Q ss_pred CeeEEEeeccCCCChhhhcccCC----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe
Q 039819 257 TERLLVYPYMSNGSVASRLREKP----------------ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL 320 (534)
Q Consensus 257 ~~~~lv~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl 320 (534)
...++||||+++|+|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+|||+
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 99999999999999999997543 389999999999999999999999 99999999999999
Q ss_pred CCCCcEEEEecccceecCCCCCc-eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccc
Q 039819 321 DDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKG 398 (534)
Q Consensus 321 ~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~ 398 (534)
+.++.+||+|||+++........ ......+|..|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----- 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-----
Confidence 99999999999999877543321 1223457889999999988889999999999999999999 9999974321
Q ss_pred hHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 399 AMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
.+.......... .. .+...+..+.+++.+|++.+|.+||++.|+++.|+..
T Consensus 266 --~~~~~~~~~~~~------~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 266 --EELFKLLKEGHR------MD----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp --HHHHHHHHHTCC------CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHHhcCCC------CC----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 112222211111 01 1122345789999999999999999999999998863
No 116
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=341.00 Aligned_cols=255 Identities=26% Similarity=0.396 Sum_probs=191.6
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-------------hhhhcccCceeeEEEEEeC-----CCeeEEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCAT-----PTERLLV 262 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~-----~~~~~lv 262 (534)
.++|...+.||+|+||.||+|+. +++.||||++.. .+..+.||||+++++++.. ....++|
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 35788889999999999999987 678999999852 2345789999999986532 2356899
Q ss_pred eeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEeccCCCCcEEeCCCCcEEEEeccccee
Q 039819 263 YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC------DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~------~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~ 336 (534)
|||+++|+|.+++.... .++..+..|+.|++.||.|||+.+ .++|+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~ 169 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169 (336)
T ss_dssp ECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceee
Confidence 99999999999997654 589999999999999999999863 23899999999999999999999999999987
Q ss_pred cCCCC-------Cceeecccccccccccccccc-------CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHH-
Q 039819 337 LDHSD-------SHVTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML- 401 (534)
Q Consensus 337 ~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~- 401 (534)
+.... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||.............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~ 249 (336)
T 3g2f_A 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ 249 (336)
T ss_dssp CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTH
T ss_pred cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhh
Confidence 65321 112234569999999999876 456789999999999999999988875433322111110
Q ss_pred ---------HHHHHHhhhcccceecccccCCC--CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 402 ---------EWVKKIQQEKKVEVLVDRELGSN--YDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 402 ---------~~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
........... ..+.+... .....+..+.+++.+||+.+|++|||+.|+++.|+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 250 TEVGNHPTFEDMQVLVSREK----QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp HHHCSSCCHHHHHHHHTTSC----CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCCchHHHHHhhhcccc----cCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 01111111111 11111111 1223566899999999999999999999999998863
No 117
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.5e-41 Score=339.54 Aligned_cols=238 Identities=22% Similarity=0.309 Sum_probs=184.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCe----e
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTE----R 259 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~----~ 259 (534)
++|...+.||+|+||.||+|+. .+++.||||++.. .+..++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5788899999999999999997 5789999998852 4566789999999999876543 3
Q ss_pred EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
++||||+++|+|.+++.....+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 99999999999999998878899999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC--ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceec
Q 039819 340 SDS--HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLV 417 (534)
Q Consensus 340 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (534)
... .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... +............
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-------~~~~~~~~~~~~~--- 238 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV-------SVAYQHVREDPIP--- 238 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHCCCCC---
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCCCCC---
Confidence 322 1223456899999999999989999999999999999999999999753321 1111111111000
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 418 DRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 418 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...... ..+..+.+++.+|++.||.+||++.+++.
T Consensus 239 ~~~~~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 239 PSARHE----GLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp HHHHST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred cccccC----CCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 000001 12347889999999999999998887765
No 118
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.3e-41 Score=357.18 Aligned_cols=248 Identities=20% Similarity=0.265 Sum_probs=185.1
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCC------C
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATP------T 257 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~------~ 257 (534)
.++|...+.||+|+||.||+|... +++.||||++.. +++.++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467888999999999999999875 689999998842 67788999999999999655 3
Q ss_pred eeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceec
Q 039819 258 ERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337 (534)
Q Consensus 258 ~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~ 337 (534)
..|+|||||+++ |.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred eEEEEEeCCCCC-HHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 569999999864 6565543 489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHH----------
Q 039819 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKI---------- 407 (534)
Q Consensus 338 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~---------- 407 (534)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......++...+.+.....
T Consensus 215 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~ 292 (464)
T 3ttj_A 215 GTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292 (464)
T ss_dssp --C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred CCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence 543 22445679999999999999999999999999999999999999998654332222222111000
Q ss_pred -----hhh-cccc-----eecccccCCC---CCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 408 -----QQE-KKVE-----VLVDRELGSN---YDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 408 -----~~~-~~~~-----~~~d~~l~~~---~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
... .... ..+...+... ........+.+++.+|++.||++|||++|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0000 0000000000 01122567899999999999999999999985
No 119
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-40 Score=333.74 Aligned_cols=243 Identities=17% Similarity=0.191 Sum_probs=188.7
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
.++|...+.||+|+||.||+|+.. +++.||||.+.. .+..++||||+++++++......++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468889999999999999999975 688999998752 56778899999999999999999999
Q ss_pred eeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC
Q 039819 263 YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 342 (534)
|||+++++|.+++.....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++........
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 99999999999998878899999999999999999999999 999999999999999999999999999987654333
Q ss_pred ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
.......||..|+|||++.+..++.++||||||+++|||+||+.||..... .......... ... ....
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~-~~~--~~~~- 257 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL--------SVMGAHINQA-IPR--PSTV- 257 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH--------HHHHHHHHSC-CCC--GGGT-
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH--------HHHHHHhccC-CCC--cccc-
Confidence 333455689999999999988999999999999999999999999974321 1111111110 000 0011
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCC-ChHHHHHHhhcC
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRP-KMSEVVRMLEGD 461 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RP-t~~ev~~~L~~~ 461 (534)
....+..+.+++.+|++.+|++|| +++++++.|+..
T Consensus 258 ---~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~ 294 (309)
T 2h34_A 258 ---RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA 294 (309)
T ss_dssp ---STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred ---CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence 112234788999999999999999 999999998864
No 120
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.8e-41 Score=347.60 Aligned_cols=251 Identities=19% Similarity=0.265 Sum_probs=199.1
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCC--eeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPT--ERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~--~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +++.||||++.. ++..++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 46788899999999999999986 489999998752 677889999999999998765 679999
Q ss_pred eccCCCChhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe----CCCCcEEEEeccccee
Q 039819 264 PYMSNGSVASRLREKP---ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL----DDFCEAIVGDFGLAKL 336 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl----~~~~~~kl~DFGla~~ 336 (534)
||+++|+|.+++.... .+++..++.|+.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997543 399999999999999999999999 99999999999999 7888899999999987
Q ss_pred cCCCCCceeecccccccccccccccc--------CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHh
Q 039819 337 LDHSDSHVTTAVRGTVGHIAPEYLST--------GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQ 408 (534)
Q Consensus 337 ~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 408 (534)
..... ......||..|+|||++.+ ..++.++|||||||++|||+||+.||.......... +......
T Consensus 166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~---~~~~~~~ 240 (396)
T 4eut_A 166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK---EVMYKII 240 (396)
T ss_dssp CCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCH---HHHHHHH
T ss_pred ccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchH---HHHHHHh
Confidence 65432 2334569999999999864 567889999999999999999999997433222111 1111111
Q ss_pred hhc---cccee---------cccc--cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 409 QEK---KVEVL---------VDRE--LGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 409 ~~~---~~~~~---------~d~~--l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
... ....+ +... ............+.+++.+|++.||++||++.|+++.++.
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~ 306 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence 111 00000 0111 1223456777889999999999999999999999988764
No 121
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3e-40 Score=347.11 Aligned_cols=184 Identities=24% Similarity=0.370 Sum_probs=157.1
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCC-----Ce
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATP-----TE 258 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~-----~~ 258 (534)
.++|...+.||+|+||.||+|+.. +++.||||++.. ++..++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 357888999999999999999975 578999998842 67788999999999999766 56
Q ss_pred eEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecC
Q 039819 259 RLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 259 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
.|+||||+. |+|.+++.....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred EEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 899999997 59999999888899999999999999999999999 99999999999999999999999999999764
Q ss_pred CCCC---------------------ceeecccccccccccccc-ccCCCCcchhHHHHHHHHHHHHhCCCCc
Q 039819 339 HSDS---------------------HVTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGMRAL 388 (534)
Q Consensus 339 ~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~k~Dv~S~Gvvl~elltG~~p~ 388 (534)
.... ......+||+.|+|||++ ....++.++|||||||++|||++|..||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 3221 123556799999999986 5566999999999999999999865544
No 122
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.3e-40 Score=333.97 Aligned_cols=237 Identities=23% Similarity=0.277 Sum_probs=196.2
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh--------------------hhhhcccCceeeEEEEEeCCCee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD--------------------MISLAVHRNLLRLIGYCATPTER 259 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~--------------------~l~~~~h~niv~l~~~~~~~~~~ 259 (534)
.++|...+.||+|+||.||+|+.. +++.||||.+.. ++..+.||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467889999999999999999985 689999998741 56788899999999999999999
Q ss_pred EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC----cEEEEecccce
Q 039819 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAK 335 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~----~~kl~DFGla~ 335 (534)
++||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||+++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999999998888899999999999999999999999 999999999999999888 79999999998
Q ss_pred ecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccce
Q 039819 336 LLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEV 415 (534)
Q Consensus 336 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+..........
T Consensus 168 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~~--- 235 (321)
T 2a2a_A 168 EIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-------QETLANITSVSY--- 235 (321)
T ss_dssp ECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-------HHHHHHHHTTCC---
T ss_pred ecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHhccc---
Confidence 775432 23345699999999999988999999999999999999999999974321 111111111100
Q ss_pred ecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 416 LVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 416 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..++..... .+..+.+++.+|++.+|.+|||+.|+++
T Consensus 236 ~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDEEFFSH----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCHHHHTT----CCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccChhhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 001111111 2347889999999999999999999986
No 123
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.8e-41 Score=340.33 Aligned_cols=251 Identities=26% Similarity=0.350 Sum_probs=194.0
Q ss_pred CCcCCeeccCCcEEEEEEEEC-----CCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCC--CeeEE
Q 039819 204 FSSKNILGAGGFGNVYKGKLG-----DGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATP--TERLL 261 (534)
Q Consensus 204 ~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~--~~~~l 261 (534)
|...+.||+|+||.||++.+. +++.||||++.. ++..++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 377889999999999998753 678999998852 57788999999999999874 56799
Q ss_pred EeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 262 VYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
||||+++|+|.+++.... +++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 113 v~e~~~~~~L~~~l~~~~-~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 999999999999997654 99999999999999999999999 99999999999999999999999999999876543
Q ss_pred Cc--eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 342 SH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 342 ~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
.. ......||..|+|||++.+..++.++|||||||++|||+||+.||........ ....+.............++.
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL--ELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH--HHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh--hhhcccccchhHHHHHHHHhc
Confidence 21 22344578899999999888899999999999999999999999864221000 000000000000000111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
......+...+..+.+++.+|++.+|.+|||+.|+++.|+.
T Consensus 267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 307 (318)
T 3lxp_A 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307 (318)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 11112223345689999999999999999999999999975
No 124
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=7.3e-41 Score=331.76 Aligned_cols=236 Identities=28% Similarity=0.499 Sum_probs=190.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------------hhhhhcccCceeeEEEEEeCCCee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------------DMISLAVHRNLLRLIGYCATPTER 259 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------------~~l~~~~h~niv~l~~~~~~~~~~ 259 (534)
++|...+.||+|+||.||+|+.. +++.||||++. +++..++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 56788899999999999999984 78999999873 1567788999999999997655
Q ss_pred EEEeeccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeccCCCCcEEeCCCCc-----EEEEec
Q 039819 260 LLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPK--IIHRDVKAANVLLDDFCE-----AIVGDF 331 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivH~Dlkp~NiLl~~~~~-----~kl~DF 331 (534)
++||||+++|+|.+.+.. ...+++..++.++.|++.||+|||+. + |+||||||+|||++.++. +||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 799999999999888864 45799999999999999999999998 7 999999999999988776 999999
Q ss_pred ccceecCCCCCceeeccccccccccccccc--cCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh
Q 039819 332 GLAKLLDHSDSHVTTAVRGTVGHIAPEYLS--TGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ 409 (534)
Q Consensus 332 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
|+++.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ...+......
T Consensus 174 g~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~ 244 (287)
T 4f0f_A 174 GLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-----KIKFINMIRE 244 (287)
T ss_dssp TTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC-----HHHHHHHHHH
T ss_pred Cccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc-----HHHHHHHHhc
Confidence 99985433 234467999999999983 455789999999999999999999999743321 1111111111
Q ss_pred hcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 410 EKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 410 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
.. .....+...+..+.+++.+|++.+|.+||++.|+++.|+.
T Consensus 245 ~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 245 EG---------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp SC---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred cC---------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 11 1111222334588999999999999999999999999875
No 125
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.8e-41 Score=351.52 Aligned_cols=235 Identities=22% Similarity=0.295 Sum_probs=186.3
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh----------------hhhhcc--cCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD----------------MISLAV--HRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~----------------~l~~~~--h~niv~l~~~~~~~~~~~lv~ 263 (534)
.+|...+.||+|+||.||+|...+++.||||++.. ++..+. ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 35888899999999999999998899999998741 455665 599999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC-
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS- 342 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~- 342 (534)
| +.+++|.+++.....+++..+..|+.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++.......
T Consensus 136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 9 56889999998888899999999999999999999998 999999999999996 58999999999987653322
Q ss_pred ceeecccccccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhc
Q 039819 343 HVTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEK 411 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~-----------~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 411 (534)
......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....+....
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~------~~~~~~~~~--- 281 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHAII--- 281 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHHH---
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH------HHHHHHHHh---
Confidence 12345679999999999864 4688999999999999999999999964221 111111111
Q ss_pred ccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 412 KVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 412 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
++.....++......+.+++.+||+.+|.+||++.|+++
T Consensus 282 ------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 282 ------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp ------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------CccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 111111112222457889999999999999999999986
No 126
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.8e-40 Score=327.58 Aligned_cols=247 Identities=19% Similarity=0.253 Sum_probs=194.1
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh------------hhhhhcccCceeeEEEEE-eCCCeeEEEeec
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK------------DMISLAVHRNLLRLIGYC-ATPTERLLVYPY 265 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~------------~~l~~~~h~niv~l~~~~-~~~~~~~lv~e~ 265 (534)
..++|...+.||+|+||.||+|+. .+++.||||.+. +++..+.|++++..+.++ ......++||||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 457899999999999999999997 578999999754 267777888877776666 566778999999
Q ss_pred cCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe---CCCCcEEEEecccceecCCCC
Q 039819 266 MSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 266 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl---~~~~~~kl~DFGla~~~~~~~ 341 (534)
+ +++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++......
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 162 (296)
T 4hgt_A 87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp C-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence 9 9999999974 55799999999999999999999999 99999999999999 789999999999999775432
Q ss_pred C------ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccce
Q 039819 342 S------HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEV 415 (534)
Q Consensus 342 ~------~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
. .......||..|+|||++.+..++.++|||||||++|||+||+.||...........+......... ...
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~-- 239 (296)
T 4hgt_A 163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TPI-- 239 (296)
T ss_dssp TCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-SCH--
T ss_pred cCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc-chh--
Confidence 2 1223457999999999999989999999999999999999999999754433222222222111111 000
Q ss_pred ecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 416 LVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 416 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
+.....+ +..+.+++.+|++.+|++||++.+|++.|+.
T Consensus 240 ---~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (296)
T 4hgt_A 240 ---EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp ---HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred ---hhhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence 0001111 3478999999999999999999999999875
No 127
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-40 Score=352.59 Aligned_cols=232 Identities=25% Similarity=0.402 Sum_probs=195.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +|+.||||++.. +++.++||||+++++++......++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888899999999999999986 789999998742 567788999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++|+|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-- 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 170 (476)
T ss_dssp ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC--
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc--
Confidence 9999999999999888899999999999999999999998 99999999999999999999999999999775432
Q ss_pred eeeccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
.....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||+.... ......+.... . .
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-------~~~~~~i~~~~-~------~-- 234 (476)
T 2y94_A 171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-------PTLFKKICDGI-F------Y-- 234 (476)
T ss_dssp CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-------HHHHHHHHTTC-C------C--
T ss_pred cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-------HHHHHHHhcCC-c------C--
Confidence 2345679999999999987765 7899999999999999999999974321 11222221111 0 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.+......+.+++.+|++.||.+|||+.|+++
T Consensus 235 --~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 235 --TPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp --CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --CCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 11112347889999999999999999999986
No 128
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.6e-41 Score=349.84 Aligned_cols=250 Identities=20% Similarity=0.268 Sum_probs=188.1
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh----------hhhhhcccCceeeEEEEEeCCC------eeEEEeec
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------DMISLAVHRNLLRLIGYCATPT------ERLLVYPY 265 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~----------~~l~~~~h~niv~l~~~~~~~~------~~~lv~e~ 265 (534)
.+|...+.||+|+||.||+|+...+..||+|++. +++..++||||++++++|.... ..++||||
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~ 119 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEEC
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeec
Confidence 4678889999999999999999877779999874 3788899999999999996433 37899999
Q ss_pred cCCCChhhhc---ccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC-CCCcEEEEecccceecCCCC
Q 039819 266 MSNGSVASRL---REKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 266 ~~~gsL~~~l---~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~-~~~~~kl~DFGla~~~~~~~ 341 (534)
++++.+.... .....+++..++.++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++......
T Consensus 120 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 120 VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp CSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred cCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 9875443332 2356799999999999999999999999 999999999999999 79999999999998764432
Q ss_pred CceeeccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh------hcccc
Q 039819 342 SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ------EKKVE 414 (534)
Q Consensus 342 ~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 414 (534)
. .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+......... .....
T Consensus 197 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~ 274 (394)
T 4e7w_A 197 P--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM 274 (394)
T ss_dssp C--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred C--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence 2 3345689999999998664 5899999999999999999999999865433222222211100000 00000
Q ss_pred eecccccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 415 VLVDRELGS-----NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 415 ~~~d~~l~~-----~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...-+.... .+....+..+.+++.+|++.||.+|||+.|+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 000000000 011113458999999999999999999999985
No 129
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=9.3e-41 Score=333.36 Aligned_cols=246 Identities=24% Similarity=0.381 Sum_probs=195.2
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-----CCCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCC--Cee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-----GDGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATP--TER 259 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~--~~~ 259 (534)
..|+..+.||+|+||.||+|++ .+++.||||++.. ++..++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4577788999999999999984 4688999998752 57788999999999999877 667
Q ss_pred EEEeeccCCCChhhhcc-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecC
Q 039819 260 LLVYPYMSNGSVASRLR-EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
++||||+++|+|.+++. ....+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccccc
Confidence 99999999999999995 456799999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCc--eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCcc--------ccccchHHHHHHHHh
Q 039819 339 HSDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS--------INQKGAMLEWVKKIQ 408 (534)
Q Consensus 339 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~--------~~~~~~~~~~~~~~~ 408 (534)
..... ......||..|+|||++.+..++.++|||||||++|||+||+.|+..... ...............
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 54321 22345688899999999888899999999999999999999998642110 000001111111111
Q ss_pred hhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 409 QEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 409 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
.. .....+...+..+.+++.+|++.+|.+|||+.++++.|+.
T Consensus 258 ~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 258 EG----------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp TT----------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred cc----------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 11 1111222334588999999999999999999999999874
No 130
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.9e-41 Score=340.56 Aligned_cols=240 Identities=25% Similarity=0.383 Sum_probs=181.5
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCC----cEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCee-
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDG----TVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTER- 259 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~- 259 (534)
.++|...+.||+|+||.||+|+.... ..||||.+.. ++..++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 46789999999999999999987543 3799998752 57778999999999999887655
Q ss_pred -----EEEeeccCCCChhhhcccC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEE
Q 039819 260 -----LLVYPYMSNGSVASRLREK------PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIV 328 (534)
Q Consensus 260 -----~lv~e~~~~gsL~~~l~~~------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl 328 (534)
++||||+++|+|.+++... ..+++..++.|+.|++.||.|||++ +|+||||||+|||++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 9999999999999998532 2599999999999999999999999 9999999999999999999999
Q ss_pred EecccceecCCCCC-ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHH
Q 039819 329 GDFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKK 406 (534)
Q Consensus 329 ~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 406 (534)
+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||....... +. ..
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~~---~~ 251 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE----IY---NY 251 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HH---HH
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH----HH---HH
Confidence 99999987644322 12223446789999999999899999999999999999999 999997533211 11 11
Q ss_pred HhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 407 IQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 407 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
...... ...+...+..+.+++.+|++.+|++|||+.++++.|+.
T Consensus 252 ~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 295 (323)
T 3qup_A 252 LIGGNR----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN 295 (323)
T ss_dssp HHTTCC----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HhcCCC----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111111 01112234578999999999999999999999999876
No 131
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.5e-40 Score=327.34 Aligned_cols=239 Identities=24% Similarity=0.348 Sum_probs=195.1
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
..++|...+.||+|+||.||+|+.. +++.||||.+. .++..++||||+++++++.+....++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3567889999999999999999986 68999999874 1567788999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC-
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS- 342 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~- 342 (534)
||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 9999999999998888899999999999999999999998 999999999999999999999999999986543221
Q ss_pred ceeeccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccccc
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDREL 421 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 421 (534)
.......||..|+|||++.+..+ +.++|||||||++|||+||+.||........ ....|.. .... .
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~----~~~~-------~ 228 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWKE----KKTY-------L 228 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH--HHHHHHT----TCTT-------S
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHhhh----cccc-------c
Confidence 12334568999999999987665 7899999999999999999999975432111 1112211 1000 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 422 GSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 422 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
......+..+.+++.+|++.+|.+|||+.|+++
T Consensus 229 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 --NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp --TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 001112347889999999999999999999874
No 132
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.5e-40 Score=349.27 Aligned_cols=178 Identities=24% Similarity=0.406 Sum_probs=144.4
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCC-----Cee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATP-----TER 259 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~-----~~~ 259 (534)
++|...+.||+|+||.||+|+.. +++.||||++.. ++..++|||||++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 67899999999999999999875 689999998742 67788999999999999543 568
Q ss_pred EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
|+||||+ +|+|.+++.....+++..+..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+++....
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 9999998 479999998888899999999999999999999999 999999999999999999999999999987642
Q ss_pred CCC--------------------------ceeecccccccccccccc-ccCCCCcchhHHHHHHHHHHHHh
Q 039819 340 SDS--------------------------HVTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELIT 383 (534)
Q Consensus 340 ~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~k~Dv~S~Gvvl~ellt 383 (534)
... ......+||+.|+|||++ ....++.++|||||||++|||+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 211 123445789999999976 45679999999999999999999
No 133
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-40 Score=328.08 Aligned_cols=231 Identities=20% Similarity=0.324 Sum_probs=172.1
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-----------------hhhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-----------------DMISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +++.||||++. ..+..++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57888999999999999999864 68999999874 1567789999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+ +++|.+.+.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-- 166 (275)
T ss_dssp ECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred hhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc--
Confidence 999 778888888878899999999999999999999999 99999999999999999999999999998765432
Q ss_pred eeeccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
......||+.|+|||++.+..+ +.++|||||||++|||+||+.||..... ........... ..
T Consensus 167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~-------~~-- 230 (275)
T 2eue_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-------PVLFKNISNGV-------YT-- 230 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-------CC--
T ss_pred cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCC-------CC--
Confidence 2334568999999999987665 7899999999999999999999974321 11111111111 01
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.+...+..+.+++.+|++.+|.+|||+.|+++
T Consensus 231 --~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 231 --LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 11123447889999999999999999999975
No 134
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-42 Score=347.07 Aligned_cols=249 Identities=22% Similarity=0.314 Sum_probs=178.1
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-----------hhhh--cccCceeeEEEEEeCCC----eeEEEee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-----------MISL--AVHRNLLRLIGYCATPT----ERLLVYP 264 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-----------~l~~--~~h~niv~l~~~~~~~~----~~~lv~e 264 (534)
++|...+.||+|+||.||+|+.. ++.||||++.. ++.. ++||||+++++++.... ..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 81 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEe
Confidence 57899999999999999999874 88999999752 3333 78999999999998776 7899999
Q ss_pred ccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEeccCCCCcEEeCCCCcEEEEeccccee
Q 039819 265 YMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH--------EQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336 (534)
Q Consensus 265 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH--------~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~ 336 (534)
|+++|+|.+++... .+++..++.++.|++.||.||| +. +|+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~ 157 (303)
T 3gxj_A 82 YHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp CCTTCCHHHHHHHC-CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-CC
T ss_pred ccCCCCHHHHHhcc-CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecCccee
Confidence 99999999999654 5888999999999999999999 66 999999999999999999999999999987
Q ss_pred cCCCCCce---eeccccccccccccccccC------CCCcchhHHHHHHHHHHHHhC----------CCCcCCCcccccc
Q 039819 337 LDHSDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELITG----------MRALEFGKSINQK 397 (534)
Q Consensus 337 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~k~Dv~S~Gvvl~elltG----------~~p~~~~~~~~~~ 397 (534)
........ .....||+.|+|||++.+. .++.++|||||||++|||+|| +.||.........
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3gxj_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCC
T ss_pred ccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCcc
Confidence 65433221 2334699999999998765 445789999999999999999 5555322111000
Q ss_pred chHHHHHHHHhhhcccceecccccCCCC-CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcCC
Q 039819 398 GAMLEWVKKIQQEKKVEVLVDRELGSNY-DRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDG 462 (534)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 462 (534)
..+....... . ...+.....+ ....+..+.+++.+||+.+|.+|||+.+|++.|+...
T Consensus 238 --~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 238 --VEEMRKVVCE-Q----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp --CC-CHHHHTT-S----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred --HHHHHHHHHH-h----hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence 0011111110 0 1111111111 1245678999999999999999999999999998754
No 135
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=6.4e-41 Score=332.36 Aligned_cols=235 Identities=23% Similarity=0.359 Sum_probs=189.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEECC-C-------cEEEEEEehh--------------hhhhcccCceeeEEEEEeCCCee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGD-G-------TVLAVKRLKD--------------MISLAVHRNLLRLIGYCATPTER 259 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~--------------~l~~~~h~niv~l~~~~~~~~~~ 259 (534)
++|...+.||+|+||.||+|+... + ..||+|.+.. ++..++||||+++++++.+.+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 578888999999999999998643 2 5799998742 57788999999999999999999
Q ss_pred EEEeeccCCCChhhhcccCCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCc--------EEEEe
Q 039819 260 LLVYPYMSNGSVASRLREKPA-LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCE--------AIVGD 330 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~-l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~--------~kl~D 330 (534)
++||||+++|+|.+++..... +++..++.++.|++.||.|||++ +|+||||||+|||++.++. +||+|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeecc
Confidence 999999999999999986544 99999999999999999999999 9999999999999998887 99999
Q ss_pred cccceecCCCCCceeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh
Q 039819 331 FGLAKLLDHSDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ 409 (534)
Q Consensus 331 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
||++..... .....||..|+|||++.+ ..++.++|||||||++|||+||..|+...... .........
T Consensus 165 fg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~------~~~~~~~~~ 233 (289)
T 4fvq_A 165 PGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS------QRKLQFYED 233 (289)
T ss_dssp CCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHT
T ss_pred CcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch------HHHHHHhhc
Confidence 999875432 223458899999999977 67899999999999999999965554322111 111111111
Q ss_pred hcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcCC
Q 039819 410 EKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDG 462 (534)
Q Consensus 410 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 462 (534)
.. .+... .+..+.+++.+|++.+|.+|||+.|+++.|+..-
T Consensus 234 ~~--------~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 234 RH--------QLPAP----KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp TC--------CCCCC----SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred cC--------CCCCC----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 11 01111 1236789999999999999999999999998754
No 136
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=327.78 Aligned_cols=234 Identities=26% Similarity=0.411 Sum_probs=173.2
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
.++|...+.||+|+||.||+|+. .+++.||||.+.. ++..++||||+++++++.+....++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 36788899999999999999997 4789999998742 56678899999999999999999999
Q ss_pred eeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 263 YPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
|||+++++|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999764 6799999999999999999999999 99999999999999999999999999998765322
Q ss_pred CceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccccc
Q 039819 342 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDREL 421 (534)
Q Consensus 342 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 421 (534)
. ......||+.|+|||++.+..++.++|||||||++|||+||+.||........ ..... ..+...
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-------~~~~~-------~~~~~~ 231 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-------LNKVV-------LADYEM 231 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------CC-------SSCCCC
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-------HHHHh-------hcccCC
Confidence 2 22345689999999999888899999999999999999999999974332110 00000 001111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 422 GSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 422 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+...+..+.+++.+|++.+|++||++.++++
T Consensus 232 ----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 232 ----PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1223457889999999999999999999974
No 137
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4e-40 Score=325.79 Aligned_cols=237 Identities=20% Similarity=0.283 Sum_probs=195.0
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
.++|...+.||+|+||.||+|... ++..||+|++.. ++..++||||+++++++.+....++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467889999999999999999975 589999998742 567889999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCc---EEEEecccceecCCC
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCE---AIVGDFGLAKLLDHS 340 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~---~kl~DFGla~~~~~~ 340 (534)
||+++|+|.+.+.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||++......
T Consensus 85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999999999998878899999999999999999999999 9999999999999986655 999999999876543
Q ss_pred CCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccc
Q 039819 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRE 420 (534)
Q Consensus 341 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 420 (534)
. ......||+.|+|||++.+..++.++||||||+++|||++|+.||..... .+.......... . ...+
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~~~~-~-~~~~- 229 (284)
T 3kk8_A 162 E--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-------HRLYAQIKAGAY-D-YPSP- 229 (284)
T ss_dssp C--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCC-C-CCTT-
T ss_pred c--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch-------hHHHHHHHhccc-c-CCch-
Confidence 2 23345699999999999998999999999999999999999999964322 111111111110 0 0000
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 421 LGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 421 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.....+..+.+++.+|++.+|++|||+.|+++
T Consensus 230 ----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 230 ----EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp ----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----hhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 01112357889999999999999999999985
No 138
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.8e-41 Score=365.74 Aligned_cols=240 Identities=27% Similarity=0.385 Sum_probs=197.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCCeeEEEeeccC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPTERLLVYPYMS 267 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~ 267 (534)
.++|...+.||+|+||.||+|++.++..||||+++. ++..++|+|||++++++.+ ...++|||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~ 344 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 344 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhc
Confidence 456778889999999999999998888899998862 6788899999999999876 67899999999
Q ss_pred CCChhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCcee
Q 039819 268 NGSVASRLRE--KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT 345 (534)
Q Consensus 268 ~gsL~~~l~~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 345 (534)
+|+|.+++.. ...+++..++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+++..........
T Consensus 345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 421 (535)
T 2h8h_A 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421 (535)
T ss_dssp TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence 9999999974 35699999999999999999999999 999999999999999999999999999986643211112
Q ss_pred eccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCC
Q 039819 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSN 424 (534)
Q Consensus 346 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 424 (534)
....++..|+|||++....++.++|||||||++|||+| |+.||..... .+....+..... ..
T Consensus 422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~-------~~~~~~i~~~~~----------~~ 484 (535)
T 2h8h_A 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------REVLDQVERGYR----------MP 484 (535)
T ss_dssp CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH-------HHHHHHHHTTCC----------CC
T ss_pred cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCC----------CC
Confidence 23446789999999998899999999999999999999 9999974321 122222221111 11
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 425 YDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 425 ~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
.+...+..+.+++.+||+.+|++|||+.+|+++|+..
T Consensus 485 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1222345789999999999999999999999999864
No 139
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2e-41 Score=342.54 Aligned_cols=248 Identities=24% Similarity=0.323 Sum_probs=197.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-----CCCcEEEEEEeh--------------hhhhhcccCceeeEEEEEe--CCCeeE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-----GDGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCA--TPTERL 260 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~--~~~~~~ 260 (534)
++|...+.||+|+||.||+|++ .++..||||++. +++..++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5788889999999999999984 468899999875 2677889999999999987 445688
Q ss_pred EEeeccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 261 LVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
+||||+++|+|.+++.. ...+++..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 99999999999999975 45699999999999999999999998 999999999999999999999999999998754
Q ss_pred CCCc--eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCcccc--------ccchHHHHHHHHhh
Q 039819 340 SDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSIN--------QKGAMLEWVKKIQQ 409 (534)
Q Consensus 340 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~--------~~~~~~~~~~~~~~ 409 (534)
.... ......||..|+|||++.+..++.++|||||||++|||+||+.||....... ...........
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 256 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL--- 256 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH---
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH---
Confidence 3322 2233457888999999988889999999999999999999999986322110 00000011111
Q ss_pred hcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcCC
Q 039819 410 EKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDG 462 (534)
Q Consensus 410 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 462 (534)
+........+...+..+.+++.+|++.+|.+|||+.|+++.|+...
T Consensus 257 -------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 302 (327)
T 3lxl_A 257 -------LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 302 (327)
T ss_dssp -------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred -------hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111111222334568999999999999999999999999998754
No 140
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.2e-40 Score=327.46 Aligned_cols=246 Identities=19% Similarity=0.248 Sum_probs=195.2
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh------------hhhhhcccCceeeEEEEE-eCCCeeEEEeecc
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK------------DMISLAVHRNLLRLIGYC-ATPTERLLVYPYM 266 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~------------~~l~~~~h~niv~l~~~~-~~~~~~~lv~e~~ 266 (534)
.++|...+.||+|+||.||+|+. .+++.||||++. .++..+.|++++..+.++ ......++||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 36788899999999999999997 578999999864 267778888877666665 5567789999999
Q ss_pred CCCChhhhcc-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe---CCCCcEEEEecccceecCCCCC
Q 039819 267 SNGSVASRLR-EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 267 ~~gsL~~~l~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl---~~~~~~kl~DFGla~~~~~~~~ 342 (534)
+++|.+++. ....+++..++.++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred -CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 999999997 455799999999999999999999999 99999999999999 4889999999999997754332
Q ss_pred c------eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhccccee
Q 039819 343 H------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVL 416 (534)
Q Consensus 343 ~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (534)
. ......||..|+|||++.+..++.++|||||||++|||+||+.||...........+......... ...
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~--- 239 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TPI--- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-SCH---
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC-Cch---
Confidence 1 124457999999999999989999999999999999999999999854332222222222111111 000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 417 VDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 417 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
+.+... .+..+.+++.+|++.+|.+||++.+|++.|+.
T Consensus 240 --~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 277 (296)
T 3uzp_A 240 --EVLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp --HHHTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred --HHHHhh----CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence 001111 23478999999999999999999999999875
No 141
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.7e-40 Score=336.02 Aligned_cols=244 Identities=22% Similarity=0.287 Sum_probs=191.5
Q ss_pred HHHHHHHHhCCCcC-CeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhc-ccCceeeEEEEEe
Q 039819 194 FRELQQATENFSSK-NILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLA-VHRNLLRLIGYCA 254 (534)
Q Consensus 194 ~~~l~~~~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~-~h~niv~l~~~~~ 254 (534)
+.......+.|... +.||+|+||.||+|+.. +++.||||++.. ++..+ .||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 33444556677776 88999999999999986 689999998752 34444 4799999999999
Q ss_pred CCCeeEEEeeccCCCChhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC---CCcEEEE
Q 039819 255 TPTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD---FCEAIVG 329 (534)
Q Consensus 255 ~~~~~~lv~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~---~~~~kl~ 329 (534)
+....++||||+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+|||++. ++.+||+
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEe
Confidence 99999999999999999999864 36799999999999999999999999 9999999999999998 7899999
Q ss_pred ecccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh
Q 039819 330 DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ 409 (534)
Q Consensus 330 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||...... +.......
T Consensus 177 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~i~~ 247 (327)
T 3lm5_A 177 DFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ-------ETYLNISQ 247 (327)
T ss_dssp CGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHH
T ss_pred eCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-------HHHHHHHh
Confidence 999999775432 233456999999999999899999999999999999999999999753321 11111111
Q ss_pred hcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 410 EKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 410 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.. ..............+.+++.+|++.+|.+|||++|+++
T Consensus 248 ~~-------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 248 VN-------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp TC-------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cc-------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 10 00011111123457889999999999999999999874
No 142
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.6e-41 Score=331.72 Aligned_cols=240 Identities=22% Similarity=0.385 Sum_probs=190.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECC----CcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCeeEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGD----GTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
.++|...+.||+|+||.||+|+..+ +..||||.+.. .+..++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678888999999999999998643 34699998752 5777899999999999865 45689
Q ss_pred EeeccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC
Q 039819 262 VYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~ 340 (534)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 9999999999999975 35699999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 341 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
.........+|..|+|||++.+..++.++|||||||++|||+| |+.||...... ..... .......
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~----~~~~~---~~~~~~~------ 233 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK----DVIGV---LEKGDRL------ 233 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG----GHHHH---HHHTCCC------
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH----HHHHH---HhcCCCC------
Confidence 3333344557889999999988899999999999999999998 99999743321 11111 1111110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
..+...+..+.+++.+|++.+|.+||++.|+++.|+..
T Consensus 234 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 234 ----PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 01112245789999999999999999999999998864
No 143
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3e-41 Score=338.93 Aligned_cols=248 Identities=26% Similarity=0.404 Sum_probs=198.0
Q ss_pred HHHHHHHhCCCcCCeeccCCcEEEEEEEE------CCCcEEEEEEehh---------------hhhhc-ccCceeeEEEE
Q 039819 195 RELQQATENFSSKNILGAGGFGNVYKGKL------GDGTVLAVKRLKD---------------MISLA-VHRNLLRLIGY 252 (534)
Q Consensus 195 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~---------------~l~~~-~h~niv~l~~~ 252 (534)
.+.....++|...+.||+|+||.||+|+. .+++.||||++.. ++..+ +||||++++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 99 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 99 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence 33444467899999999999999999984 3568899998752 45555 69999999999
Q ss_pred EeCCC-eeEEEeeccCCCChhhhcccCCC----------------CCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCC
Q 039819 253 CATPT-ERLLVYPYMSNGSVASRLREKPA----------------LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKA 315 (534)
Q Consensus 253 ~~~~~-~~~lv~e~~~~gsL~~~l~~~~~----------------l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp 315 (534)
+...+ ..++||||+++|+|.+++..... +++..++.++.|++.||.|||+. +|+||||||
T Consensus 100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp 176 (316)
T 2xir_A 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176 (316)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCcc
Confidence 98765 48999999999999999975443 89999999999999999999999 999999999
Q ss_pred CcEEeCCCCcEEEEecccceecCCCCC-ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCcc
Q 039819 316 ANVLLDDFCEAIVGDFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKS 393 (534)
Q Consensus 316 ~NiLl~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~ 393 (534)
+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 177 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 256 (316)
T 2xir_A 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256 (316)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred ceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence 999999999999999999987654332 22334567899999999998899999999999999999998 9999974332
Q ss_pred ccccchHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 394 INQKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
.. ........... .. .+...+..+.+++.+|++.+|.+|||+.|+++.|+..
T Consensus 257 ~~------~~~~~~~~~~~------~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 257 DE------EFCRRLKEGTR------MR----APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp SH------HHHHHHHHTCC------CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hH------HHHHHhccCcc------CC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11 11111111111 01 1112245789999999999999999999999998753
No 144
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.2e-40 Score=335.90 Aligned_cols=243 Identities=21% Similarity=0.219 Sum_probs=189.8
Q ss_pred HHHHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-------------------hhhhhcccCceeeEEEEEeCC
Q 039819 197 LQQATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-------------------DMISLAVHRNLLRLIGYCATP 256 (534)
Q Consensus 197 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-------------------~~l~~~~h~niv~l~~~~~~~ 256 (534)
+....++|...+.||+|+||.||+|... ++..||||++. +++..++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 4566788999999999999999999974 68899999874 157788999999999999999
Q ss_pred CeeEEEeeccCCCChhhhccc----------------------------------------CCCCCHHHHHHHHHHHHHH
Q 039819 257 TERLLVYPYMSNGSVASRLRE----------------------------------------KPALDWNTRKRIAIGAARG 296 (534)
Q Consensus 257 ~~~~lv~e~~~~gsL~~~l~~----------------------------------------~~~l~~~~~~~i~~~i~~~ 296 (534)
...++||||+++|+|.+++.. ...+++..++.|+.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999998852 1123577788999999999
Q ss_pred HHHHHhcCCCCeEeccCCCCcEEeCCCC--cEEEEecccceecCCCC---Cceeecccccccccccccccc--CCCCcch
Q 039819 297 LLYLHEQCDPKIIHRDVKAANVLLDDFC--EAIVGDFGLAKLLDHSD---SHVTTAVRGTVGHIAPEYLST--GQSSEKT 369 (534)
Q Consensus 297 l~yLH~~~~~~ivH~Dlkp~NiLl~~~~--~~kl~DFGla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~--~~~~~k~ 369 (534)
|.|||+. +|+||||||+|||++.++ .+||+|||+++...... ........||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998766 89999999998764321 112345669999999999865 6789999
Q ss_pred hHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCC
Q 039819 370 DVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 449 (534)
Q Consensus 370 Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP 449 (534)
|||||||++|||+||+.||...... +.......... .. ...........+.+++.+|++.+|.+||
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp 323 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA-------DTISQVLNKKL--CF-----ENPNYNVLSPLARDLLSNLLNRNVDERF 323 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCC--CT-----TSGGGGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH-------HHHHHHHhccc--cc-----CCcccccCCHHHHHHHHHHcCCChhHCC
Confidence 9999999999999999999743321 11111111110 00 0000011235788999999999999999
Q ss_pred ChHHHHH
Q 039819 450 KMSEVVR 456 (534)
Q Consensus 450 t~~ev~~ 456 (534)
++.|+++
T Consensus 324 s~~~~l~ 330 (345)
T 3hko_A 324 DAMRALQ 330 (345)
T ss_dssp CHHHHHH
T ss_pred CHHHHhc
Confidence 9999986
No 145
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=7.4e-41 Score=342.69 Aligned_cols=256 Identities=24% Similarity=0.293 Sum_probs=182.0
Q ss_pred HHHHHHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-------------hhhhcccCceeeEEEEEeCCCe--
Q 039819 195 RELQQATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCATPTE-- 258 (534)
Q Consensus 195 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~~~~-- 258 (534)
++.....++|...+.||+|+||.||+|+.. ++..||||++.. .+..++||||++++++|.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 455677889999999999999999999985 689999998742 4566789999999999965433
Q ss_pred -----eEEEeeccCCCChhhh----cccCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEeccCCCCcEEeCC-CCcE
Q 039819 259 -----RLLVYPYMSNGSVASR----LREKPALDWNTRKRIAIGAARGLLYLH--EQCDPKIIHRDVKAANVLLDD-FCEA 326 (534)
Q Consensus 259 -----~~lv~e~~~~gsL~~~----l~~~~~l~~~~~~~i~~~i~~~l~yLH--~~~~~~ivH~Dlkp~NiLl~~-~~~~ 326 (534)
.++||||++++ |.+. ......+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.+
T Consensus 96 ~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEE
T ss_pred ccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcE
Confidence 78999999874 4333 345667999999999999999999999 77 9999999999999996 8999
Q ss_pred EEEecccceecCCCCCceeeccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHH--
Q 039819 327 IVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW-- 403 (534)
Q Consensus 327 kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~-- 403 (534)
||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||+||+.||...........+...
T Consensus 172 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 249 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249 (360)
T ss_dssp EECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred EEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcC
Confidence 999999998765432 233456899999999986544 899999999999999999999999764432221111111
Q ss_pred ------HHHHhhhcccceeccc------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 404 ------VKKIQQEKKVEVLVDR------ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 404 ------~~~~~~~~~~~~~~d~------~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..............+. .............+.+++.+|++.||.+|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0111000000000000 0001111123568999999999999999999999974
No 146
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.8e-40 Score=332.15 Aligned_cols=241 Identities=20% Similarity=0.263 Sum_probs=185.7
Q ss_pred hCCCcC-CeeccCCcEEEEEEEEC-CCcEEEEEEehh--------------hhhh-cccCceeeEEEEEeCCCeeEEEee
Q 039819 202 ENFSSK-NILGAGGFGNVYKGKLG-DGTVLAVKRLKD--------------MISL-AVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 202 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~--------------~l~~-~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
+.|... +.||+|+||.||+|+.. +++.||||++.. ++.+ .+||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 456663 78999999999999964 789999998842 3444 579999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCc---EEEEecccceecCCCC
Q 039819 265 YMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCE---AIVGDFGLAKLLDHSD 341 (534)
Q Consensus 265 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~---~kl~DFGla~~~~~~~ 341 (534)
|+++|+|.+++.....+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++......
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 168 (316)
T 2ac3_A 92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG 168 (316)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence 999999999998878899999999999999999999999 9999999999999998776 9999999998653221
Q ss_pred C------ceeecccccccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccch--------HHH
Q 039819 342 S------HVTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGA--------MLE 402 (534)
Q Consensus 342 ~------~~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~--------~~~ 402 (534)
. .......||+.|+|||++.. ..++.++|||||||++|||+||+.||........... ...
T Consensus 169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 248 (316)
T 2ac3_A 169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248 (316)
T ss_dssp -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence 1 11223459999999999865 5578999999999999999999999975432211100 001
Q ss_pred HHHHHhhhcccceecccccCCCCCH----HHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 403 WVKKIQQEKKVEVLVDRELGSNYDR----IEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 403 ~~~~~~~~~~~~~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
....+... .. .++. ..+..+.+++.+|++.||.+|||+.|+++
T Consensus 249 ~~~~i~~~-~~----------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 249 LFESIQEG-KY----------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHC-CC----------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhcc-Cc----------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 11111111 00 1111 12357899999999999999999999986
No 147
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-40 Score=338.69 Aligned_cols=250 Identities=23% Similarity=0.330 Sum_probs=189.3
Q ss_pred HHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-------------------hhhhhcccCceeeEEEEEeCCCe
Q 039819 199 QATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-------------------DMISLAVHRNLLRLIGYCATPTE 258 (534)
Q Consensus 199 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-------------------~~l~~~~h~niv~l~~~~~~~~~ 258 (534)
...++|...+.||+|+||.||+|+.. +++.||||++. +++..++||||+++++++.....
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 44578999999999999999999985 58999999874 15677889999999999999999
Q ss_pred eEEEeeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceec
Q 039819 259 RLLVYPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337 (534)
Q Consensus 259 ~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~ 337 (534)
.++||||+++ +|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999986 888887654 4689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeeccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh---hccc
Q 039819 338 DHSDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ---EKKV 413 (534)
Q Consensus 338 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~ 413 (534)
.... .......||+.|+|||++.+. .++.++|||||||++|||++|++||........ +......... ....
T Consensus 163 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~ 238 (346)
T 1ua2_A 163 GSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ---LTRIFETLGTPTEEQWP 238 (346)
T ss_dssp TSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCTTTSS
T ss_pred cCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH---HHHHHHHcCCCChhhhh
Confidence 5332 223445689999999998654 488999999999999999999999975433211 1111111100 0000
Q ss_pred --ceeccc---ccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 414 --EVLVDR---ELGSNYD-----RIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 414 --~~~~d~---~l~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
....+. ......+ ......+.+++.+|++.||.+|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000000 0000001 112357899999999999999999999986
No 148
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.7e-41 Score=335.95 Aligned_cols=238 Identities=26% Similarity=0.390 Sum_probs=185.3
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh------------hhhhcccCceeeEEEEEeCCCeeEEEeeccCCC
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD------------MISLAVHRNLLRLIGYCATPTERLLVYPYMSNG 269 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~~g 269 (534)
++|...+.||+|+||.||+|+.. ++.||||++.. .+..++||||+++++++.+ ..++||||+++|
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~ 84 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGG 84 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCC
Confidence 56778899999999999999985 68899998852 6778899999999998874 479999999999
Q ss_pred ChhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCc-EEEEecccceecCCCCCcee
Q 039819 270 SVASRLREKP---ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCE-AIVGDFGLAKLLDHSDSHVT 345 (534)
Q Consensus 270 sL~~~l~~~~---~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~-~kl~DFGla~~~~~~~~~~~ 345 (534)
+|.+++.... .+++..++.++.|+++||.|||+....+|+||||||+|||++.++. +||+|||++...... .
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----~ 160 (307)
T 2eva_A 85 SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----M 160 (307)
T ss_dssp BHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------
T ss_pred CHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----c
Confidence 9999997654 4789999999999999999999932238999999999999998886 799999999765432 2
Q ss_pred eccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCC
Q 039819 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNY 425 (534)
Q Consensus 346 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 425 (534)
....||..|+|||++.+..++.++|||||||++|||+||+.||...... ............. +....
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~------~~~~~-- 227 (307)
T 2eva_A 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP-----AFRIMWAVHNGTR------PPLIK-- 227 (307)
T ss_dssp ----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS-----HHHHHHHHHTTCC------CCCBT--
T ss_pred ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc-----HHHHHHHHhcCCC------CCccc--
Confidence 2345899999999999889999999999999999999999999743211 1111111111110 11111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 426 DRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 426 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
..+..+.+++.+|++.+|.+|||+.++++.|+..
T Consensus 228 --~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 261 (307)
T 2eva_A 228 --NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261 (307)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 2234788999999999999999999999998763
No 149
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.2e-40 Score=345.41 Aligned_cols=239 Identities=21% Similarity=0.316 Sum_probs=185.2
Q ss_pred HHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------------hhhhhcccCceeeEEEEEeC
Q 039819 199 QATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------------DMISLAVHRNLLRLIGYCAT 255 (534)
Q Consensus 199 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------------~~l~~~~h~niv~l~~~~~~ 255 (534)
...++|...+.||+|+||.||+|... +++.||||++. +++..++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999875 57999999864 15678899999999999864
Q ss_pred CCeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCC---CcEEEEecc
Q 039819 256 PTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDF---CEAIVGDFG 332 (534)
Q Consensus 256 ~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~---~~~kl~DFG 332 (534)
...++||||+++|+|.+++.....+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred -CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecc
Confidence 45799999999999999999888899999999999999999999999 99999999999999654 459999999
Q ss_pred cceecCCCCCceeecccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh
Q 039819 333 LAKLLDHSDSHVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ 409 (534)
Q Consensus 333 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
+++..... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... .+...+ ..
T Consensus 288 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~---~~~~~i---~~ 359 (419)
T 3i6u_A 288 HSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQI---TS 359 (419)
T ss_dssp TTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC---CHHHHH---HT
T ss_pred cceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH---HHHHHH---hc
Confidence 99876532 22345679999999999853 567889999999999999999999997433211 111111 11
Q ss_pred hcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 410 EKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 410 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..... .+.... ..+..+.+++.+|++.+|.+||++.|+++
T Consensus 360 -~~~~~--~~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 360 -GKYNF--IPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp -TCCCC--CHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -CCCCC--Cchhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 10000 000000 12357899999999999999999999986
No 150
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.4e-40 Score=329.31 Aligned_cols=233 Identities=23% Similarity=0.333 Sum_probs=194.8
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +++.||+|.+.. ++..+.||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 56788899999999999999986 578999998641 567788999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++++|.+++.....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 95 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 170 (294)
T 2rku_A 95 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 170 (294)
T ss_dssp ECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc-
Confidence 9999999999998878899999999999999999999999 999999999999999999999999999987653222
Q ss_pred eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
......||..|+|||++.+..++.++||||||+++|||+||+.||..... .+......... ..+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~-------~~~-- 234 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-------KETYLRIKKNE-------YSI-- 234 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHTTC-------CCC--
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHhhcc-------CCC--
Confidence 23345689999999999888899999999999999999999999974331 11111111110 011
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+......+.+++.+|++.+|++||++.|+++
T Consensus 235 --~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 235 --PKHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred --ccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1122347889999999999999999999875
No 151
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-41 Score=339.19 Aligned_cols=240 Identities=29% Similarity=0.444 Sum_probs=188.2
Q ss_pred hCCCcCCeeccCCcEEEEEEEECC-----CcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCeeEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGD-----GTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
++|...+.||+|+||.||+|.... +..||||.+.. ++..++||||+++++++......++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 355667899999999999998642 24699998752 5677899999999999999999999
Q ss_pred EeeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC
Q 039819 262 VYPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~ 340 (534)
||||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999754 6799999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc--eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceec
Q 039819 341 DSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLV 417 (534)
Q Consensus 341 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (534)
... ......+|..|+|||++.+..++.++|||||||++|||+| |+.||..... .+....+.....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~~~~~~~~~----- 268 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-------HEVMKAINDGFR----- 268 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTCC-----
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-------HHHHHHHHCCCc-----
Confidence 211 1222346788999999988899999999999999999999 9999964321 111222211111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 418 DRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 418 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
...+...+..+.+++.+||+.+|.+||++.++++.|+..
T Consensus 269 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 269 -----LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp -----CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred -----CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 011122345789999999999999999999999998764
No 152
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.9e-41 Score=334.66 Aligned_cols=240 Identities=27% Similarity=0.367 Sum_probs=194.3
Q ss_pred HhCCCcCC-eeccCCcEEEEEEEE---CCCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCeeE
Q 039819 201 TENFSSKN-ILGAGGFGNVYKGKL---GDGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTERL 260 (534)
Q Consensus 201 ~~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~~ 260 (534)
.++|...+ .||+|+||.||+|.+ ..++.||||++.. ++..++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35666666 899999999999965 2468899998752 56778999999999999 556789
Q ss_pred EEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC
Q 039819 261 LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~ 340 (534)
+||||+++++|.+++.....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 9999999999999999888899999999999999999999999 9999999999999999999999999999877544
Q ss_pred CCcee--eccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceec
Q 039819 341 DSHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLV 417 (534)
Q Consensus 341 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (534)
..... ....+|..|+|||.+.+..++.++||||||+++|||+| |+.||...... +..........
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-------~~~~~~~~~~~----- 238 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAMLEKGER----- 238 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTTCC-----
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-------HHHHHHHcCCC-----
Confidence 33221 22346789999999988889999999999999999999 99999743221 11111111110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 418 DRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 418 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
. ..+...+..+.+++.+|++.+|.+||++.++++.|+..
T Consensus 239 -~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 239 -M----GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp -C----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred -C----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1 11222345899999999999999999999999999864
No 153
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=341.02 Aligned_cols=248 Identities=17% Similarity=0.191 Sum_probs=194.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEECC---------CcEEEEEEeh---------hhhhhcccCceee---------------
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGD---------GTVLAVKRLK---------DMISLAVHRNLLR--------------- 248 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~---------~~l~~~~h~niv~--------------- 248 (534)
++|...+.||+|+||.||+|+... ++.||||.+. +++..++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 568888999999999999999864 7899999885 2678888999887
Q ss_pred EEEEEeC-CCeeEEEeeccCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC-
Q 039819 249 LIGYCAT-PTERLLVYPYMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC- 324 (534)
Q Consensus 249 l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~- 324 (534)
+++++.. ....++||||+ +++|.+++... ..+++..++.|+.|++.||.|||++ +|+||||||+|||++.++
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~~~~~ 197 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVDPEDQ 197 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEETTEE
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEcCCCC
Confidence 6777765 67889999999 99999999865 7799999999999999999999999 999999999999999998
Q ss_pred -cEEEEecccceecCCCCCc------eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCcccccc
Q 039819 325 -EAIVGDFGLAKLLDHSDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQK 397 (534)
Q Consensus 325 -~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~ 397 (534)
.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||...... .
T Consensus 198 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~ 275 (352)
T 2jii_A 198 SQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN--T 275 (352)
T ss_dssp EEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC--H
T ss_pred ceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC--H
Confidence 9999999999876432211 123457999999999999889999999999999999999999999743211 1
Q ss_pred chHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 398 GAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
..+......... ....+.+..... ...+..+.+++.+|++.+|.+||++.+|++.|+.
T Consensus 276 ~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 333 (352)
T 2jii_A 276 EDIMKQKQKFVD--KPGPFVGPCGHW---IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEA 333 (352)
T ss_dssp HHHHHHHHHHHH--SCCCEECTTSCE---ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhccC--Chhhhhhhcccc---CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence 112222221111 111111111100 0113578999999999999999999999999876
No 154
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=7.1e-40 Score=332.84 Aligned_cols=252 Identities=22% Similarity=0.307 Sum_probs=198.2
Q ss_pred HHHHhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-----------hhhh--cccCceeeEEEEEeCCC----eeE
Q 039819 198 QQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-----------MISL--AVHRNLLRLIGYCATPT----ERL 260 (534)
Q Consensus 198 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-----------~l~~--~~h~niv~l~~~~~~~~----~~~ 260 (534)
....++|...+.||+|+||.||+|+. +++.||||++.. ++.. ++||||+++++++.... ..+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~ 116 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence 44567899999999999999999998 588999999852 3333 78999999999998876 789
Q ss_pred EEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEeccCCCCcEEeCCCCcEEEEecc
Q 039819 261 LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLH--------EQCDPKIIHRDVKAANVLLDDFCEAIVGDFG 332 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH--------~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFG 332 (534)
+||||+++|+|.+++... .+++..++.++.|++.||.||| +. +|+||||||+|||++.++.+||+|||
T Consensus 117 lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 192 (342)
T 1b6c_B 117 LVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLG 192 (342)
T ss_dssp EEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEeecCCCcHHHHHhcc-CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEEECC
Confidence 999999999999999764 5899999999999999999999 66 99999999999999999999999999
Q ss_pred cceecCCCCCc---eeeccccccccccccccccC------CCCcchhHHHHHHHHHHHHhC----------CCCcCCCcc
Q 039819 333 LAKLLDHSDSH---VTTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELITG----------MRALEFGKS 393 (534)
Q Consensus 333 la~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~Dv~S~Gvvl~elltG----------~~p~~~~~~ 393 (534)
+++........ ......||+.|+|||++.+. .++.++|||||||++|||+|| +.||.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~ 272 (342)
T 1b6c_B 193 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 272 (342)
T ss_dssp TCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCc
Confidence 99876544322 12345699999999998765 234789999999999999999 667753322
Q ss_pred ccccchHHHHHHHHhhhcccceecccccCCC-CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 394 INQKGAMLEWVKKIQQEKKVEVLVDRELGSN-YDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
.. .....+........ ..+.+... ........+.+++.+||+.+|++|||+.||++.|+..
T Consensus 273 ~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 273 SD--PSVEEMRKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp SS--CCHHHHHHHHTTSC-----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred Cc--ccHHHHHHHHHHHH-----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 11 11222222221111 11111111 1234567899999999999999999999999999863
No 155
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.7e-40 Score=328.10 Aligned_cols=235 Identities=23% Similarity=0.399 Sum_probs=195.3
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------hhhhhcccCceeeEEEEEeC-------------
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------DMISLAVHRNLLRLIGYCAT------------- 255 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------~~l~~~~h~niv~l~~~~~~------------- 255 (534)
...+|...+.||+|+||.||+|+.. +++.||||++. +++..++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 88 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSS 88 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccc
Confidence 4467889999999999999999986 78999999885 26788899999999998854
Q ss_pred ---CCeeEEEeeccCCCChhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEe
Q 039819 256 ---PTERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGD 330 (534)
Q Consensus 256 ---~~~~~lv~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~D 330 (534)
....++||||+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 89 RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEECc
Confidence 3457999999999999999964 35799999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhh
Q 039819 331 FGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQE 410 (534)
Q Consensus 331 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 410 (534)
||+++...... ......||+.|+|||++.+..++.++|||||||++|||+||..|+... ..+......
T Consensus 166 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---------~~~~~~~~~- 233 (284)
T 2a19_B 166 FGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET---------SKFFTDLRD- 233 (284)
T ss_dssp CTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH---------HHHHHHHHT-
T ss_pred chhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH---------HHHHHHhhc-
Confidence 99998775432 233456899999999999888999999999999999999999887411 111111111
Q ss_pred cccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 411 KKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 411 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
..+...+ +..+.+++.+|++.+|.+||++.|+++.|+..
T Consensus 234 --------~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 234 --------GIISDIF----DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp --------TCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------ccccccC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1111122 34688999999999999999999999998754
No 156
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.8e-41 Score=340.46 Aligned_cols=246 Identities=24% Similarity=0.376 Sum_probs=198.7
Q ss_pred HHHHHHhCCCcCCeeccCCcEEEEEEEEC------CCcEEEEEEehh---------------hhhhcccCceeeEEEEEe
Q 039819 196 ELQQATENFSSKNILGAGGFGNVYKGKLG------DGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCA 254 (534)
Q Consensus 196 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~ 254 (534)
+.....++|...+.||+|+||.||+|+.. .++.||||.+.. ++..++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 33445678889999999999999999864 367899998752 577889999999999999
Q ss_pred CCCeeEEEeeccCCCChhhhcccC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC
Q 039819 255 TPTERLLVYPYMSNGSVASRLREK----------PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC 324 (534)
Q Consensus 255 ~~~~~~lv~e~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~ 324 (534)
+....++||||+++|+|.+++... ..+++..++.++.|++.||.|||++ +|+||||||+|||++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCC
Confidence 999999999999999999998642 4579999999999999999999999 999999999999999999
Q ss_pred cEEEEecccceecCCCCCc-eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHH
Q 039819 325 EAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLE 402 (534)
Q Consensus 325 ~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 402 (534)
.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||..... .+
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~ 248 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-------EQ 248 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-------HH
T ss_pred eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-------HH
Confidence 9999999999865432211 1223346889999999988899999999999999999999 8899864321 11
Q ss_pred HHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 403 WVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 403 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
.......... . ..+...+..+.+++.+|++.+|.+||++.|+++.|+..
T Consensus 249 ~~~~~~~~~~-~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 249 VLRFVMEGGL-L---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp HHHHHHTTCC-C---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred HHHHHHcCCc-C---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 1222111110 0 11122345789999999999999999999999999874
No 157
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-40 Score=342.46 Aligned_cols=245 Identities=22% Similarity=0.342 Sum_probs=184.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCC------e
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPT------E 258 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~------~ 258 (534)
++|...+.||+|+||.||+|... +|+.||||++. +++..++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 57888899999999999999984 68999999883 2577889999999999997653 4
Q ss_pred eEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecC
Q 039819 259 RLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 259 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
.|+||||+ +++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 59999999 8899998876 4699999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCceeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHH--------Hhh
Q 039819 339 HSDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKK--------IQQ 409 (534)
Q Consensus 339 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~--------~~~ 409 (534)
.. .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+...... ...
T Consensus 180 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 180 SE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp SS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred cc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 32 334578999999999876 67899999999999999999999999865432222111111100 000
Q ss_pred h------cccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 410 E------KKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 410 ~------~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
. ..........+. .........+.+++.+|++.||.+|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0 000000000000 011122457899999999999999999999986
No 158
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.2e-40 Score=349.80 Aligned_cols=184 Identities=20% Similarity=0.272 Sum_probs=161.3
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-------------hhhhc------ccCceeeEEEEEeCCCeeEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-------------MISLA------VHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-------------~l~~~------~h~niv~l~~~~~~~~~~~l 261 (534)
.+|...+.||+|+||.||+|... +++.||||++.. ++..+ .|+||+++++++......++
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 56888899999999999999875 588999999852 23333 57899999999999999999
Q ss_pred EeeccCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCc--EEEEecccceec
Q 039819 262 VYPYMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCE--AIVGDFGLAKLL 337 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~--~kl~DFGla~~~ 337 (534)
||||+. ++|.+++... ..+++..++.|+.||+.||.|||+. +||||||||+|||++.++. +||+|||+++..
T Consensus 177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~ 252 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252 (429)
T ss_dssp EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence 999996 6999988754 3599999999999999999999999 9999999999999999887 999999999865
Q ss_pred CCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCcc
Q 039819 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS 393 (534)
Q Consensus 338 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~ 393 (534)
... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 253 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 253 HQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp TCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred CCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 432 2345789999999999999999999999999999999999999986543
No 159
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2e-40 Score=329.27 Aligned_cols=242 Identities=29% Similarity=0.445 Sum_probs=182.0
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
++|...+.||+|+||.||+|+... .||||.++ +++..++||||+++++++ .....++||||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 578888999999999999998754 49999875 267788999999999965 45568999999
Q ss_pred cCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC-Cc
Q 039819 266 MSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SH 343 (534)
Q Consensus 266 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~-~~ 343 (534)
+++++|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 999999999964 45699999999999999999999999 99999999999999999999999999998654321 22
Q ss_pred eeeccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccc
Q 039819 344 VTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRE 420 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 420 (534)
......||+.|+|||++. ...++.++|||||||++|||+||+.||...... ..+.+.+. . .... +.
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~---~-~~~~----~~ 246 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR---DQIIEMVG---R-GSLS----PD 246 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH---HHHHHHHH---H-TSCC----CC
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH---HHHHHHhc---c-cccC----cc
Confidence 233456999999999986 567888999999999999999999999743321 11112111 1 1111 00
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 421 LGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 421 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
+ .......+..+.+++.+|++.+|.+||++.++++.|+..
T Consensus 247 ~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l 286 (289)
T 3og7_A 247 L-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286 (289)
T ss_dssp T-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred h-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 0 011122345899999999999999999999999999864
No 160
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.1e-40 Score=344.76 Aligned_cols=246 Identities=24% Similarity=0.333 Sum_probs=186.8
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------hhhhhcccCceeeEEEEEeCC----C--eeEEEee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------DMISLAVHRNLLRLIGYCATP----T--ERLLVYP 264 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------~~l~~~~h~niv~l~~~~~~~----~--~~~lv~e 264 (534)
.+|...+.||+|+||.||+|+.. +++.||||++. +++..++|||||+++++|... + ..++|||
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e 133 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 133 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence 35778899999999999999985 58999999874 278888999999999998532 2 3579999
Q ss_pred ccCCCChhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCC-CcEEEEecccceecCC
Q 039819 265 YMSNGSVASRLR----EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDF-CEAIVGDFGLAKLLDH 339 (534)
Q Consensus 265 ~~~~gsL~~~l~----~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~-~~~kl~DFGla~~~~~ 339 (534)
|+++ +|.+.+. ....+++..++.++.||++||.|||+. +|+||||||+|||++.+ +.+||+|||+++....
T Consensus 134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 9986 5555543 356799999999999999999999998 99999999999999965 6789999999997654
Q ss_pred CCCceeeccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh---------
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ--------- 409 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--------- 409 (534)
... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+. +.+.++....
T Consensus 210 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~---l~~i~~~lg~p~~~~~~~~ 284 (420)
T 1j1b_A 210 GEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ---LVEIIKVLGTPTREQIREM 284 (420)
T ss_dssp TCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCSCCHHHHHHH
T ss_pred CCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHhh
Confidence 322 3345689999999998764 689999999999999999999999986443222 2222221100
Q ss_pred hcccceecccccCCC-----CCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 410 EKKVEVLVDRELGSN-----YDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 410 ~~~~~~~~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.........+.+... +....+.++.+++.+|++.||.+||++.|+++
T Consensus 285 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 285 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000111111111100 11122458899999999999999999999985
No 161
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.1e-40 Score=352.40 Aligned_cols=233 Identities=26% Similarity=0.343 Sum_probs=192.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +++.||||++.. ++..++||||+++++++.+....|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 67888899999999999999985 689999999842 567889999999999999999999999
Q ss_pred eccCCCChhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 264 PYMSNGSVASRLRE----KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 264 e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
||+++|+|.+++.. ...+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999998864 34699999999999999999999999 999999999999999999999999999997754
Q ss_pred CCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
... .....+||+.|+|||++.+..++.++|||||||++|||+||+.||........ ..++...+... . .
T Consensus 342 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~---~~~~~~~i~~~-~------~ 410 (543)
T 3c4z_A 342 GQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE---NKELKQRVLEQ-A------V 410 (543)
T ss_dssp TCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC---HHHHHHHHHHC-C------C
T ss_pred CCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh---HHHHHHHHhhc-c------c
Confidence 322 23445799999999999998999999999999999999999999975432111 11222222111 0 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChH
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMS 452 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ 452 (534)
.++...+..+.+++.+|++.+|.+||++.
T Consensus 411 ----~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 411 ----TYPDKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp ----CCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred ----CCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence 11222345788999999999999999864
No 162
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.8e-41 Score=339.36 Aligned_cols=242 Identities=28% Similarity=0.406 Sum_probs=195.3
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECC------CcEEEEEEehh---------------hhhhc-ccCceeeEEEEEeCCCe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGD------GTVLAVKRLKD---------------MISLA-VHRNLLRLIGYCATPTE 258 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~---------------~l~~~-~h~niv~l~~~~~~~~~ 258 (534)
.++|...+.||+|+||.||+|.... ...||||.+.. ++..+ +||||+++++++.....
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 3678888999999999999998742 24799998752 56667 89999999999999999
Q ss_pred eEEEeeccCCCChhhhccc--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC
Q 039819 259 RLLVYPYMSNGSVASRLRE--------------KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC 324 (534)
Q Consensus 259 ~~lv~e~~~~gsL~~~l~~--------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~ 324 (534)
.++||||+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCC
Confidence 9999999999999999863 34589999999999999999999999 999999999999999999
Q ss_pred cEEEEecccceecCCCCC-ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHH
Q 039819 325 EAIVGDFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLE 402 (534)
Q Consensus 325 ~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 402 (534)
.+||+|||+++....... .......||..|+|||++.+..++.++|||||||++|||+| |+.||...... .....
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~~~~ 278 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN---SKFYK 278 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS---HHHHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh---HHHHH
Confidence 999999999986643322 22334457889999999988899999999999999999999 99999743221 11111
Q ss_pred HHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 403 WVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 403 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
.+. ... ....+...+..+.+++.+|++.+|.+|||+.||++.|+..
T Consensus 279 ~~~----~~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 279 LVK----DGY---------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp HHH----HTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHh----cCC---------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 111 110 0011112245789999999999999999999999999864
No 163
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.9e-40 Score=335.47 Aligned_cols=233 Identities=23% Similarity=0.328 Sum_probs=195.0
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+++.. +++.||+|.+.. ++..++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 57888899999999999999986 578999998741 567788999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++++|.+++.....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 121 e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~- 196 (335)
T 2owb_A 121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE- 196 (335)
T ss_dssp CCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred ecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc-
Confidence 9999999999998878899999999999999999999999 999999999999999999999999999987653322
Q ss_pred eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
......||..|+|||++.+..++.++|||||||++|||+||+.||..... .+......... ..+..
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~-------~~~~~ 262 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-------KETYLRIKKNE-------YSIPK 262 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHHTC-------CCCCT
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-------HHHHHHHhcCC-------CCCCc
Confidence 23445699999999999888899999999999999999999999974321 11111111111 01111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.....+.+++.+|++.||++||++.|+++
T Consensus 263 ----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 263 ----HINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ----TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22347889999999999999999999975
No 164
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.6e-41 Score=345.70 Aligned_cols=253 Identities=21% Similarity=0.251 Sum_probs=189.8
Q ss_pred HHHHhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh----------hhhhhcccCceeeEEEEEeCC----------
Q 039819 198 QQATENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK----------DMISLAVHRNLLRLIGYCATP---------- 256 (534)
Q Consensus 198 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~----------~~l~~~~h~niv~l~~~~~~~---------- 256 (534)
....++|...+.||+|+||.||+|+. .+++.||||++. ++++.++|||||+++++|...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 34567899999999999999999987 578999999875 378888999999999998443
Q ss_pred ----------------------------CeeEEEeeccCCCChhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 039819 257 ----------------------------TERLLVYPYMSNGSVASRLR----EKPALDWNTRKRIAIGAARGLLYLHEQC 304 (534)
Q Consensus 257 ----------------------------~~~~lv~e~~~~gsL~~~l~----~~~~l~~~~~~~i~~~i~~~l~yLH~~~ 304 (534)
...++||||++ |+|.+.+. ....+++..+..++.|+++||.|||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~- 160 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL- 160 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 34789999998 47766664 457799999999999999999999998
Q ss_pred CCCeEeccCCCCcEEeC-CCCcEEEEecccceecCCCCCceeeccccccccccccccccC-CCCcchhHHHHHHHHHHHH
Q 039819 305 DPKIIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELI 382 (534)
Q Consensus 305 ~~~ivH~Dlkp~NiLl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvvl~ell 382 (534)
+|+||||||+|||++ .++.+||+|||+++...... ......||+.|+|||++.+. .++.++|||||||++|||+
T Consensus 161 --gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 236 (383)
T 3eb0_A 161 --GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236 (383)
T ss_dssp --TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred --cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence 999999999999997 68999999999999765433 23345689999999998764 4899999999999999999
Q ss_pred hCCCCcCCCccccccchHHHHHHHHhh------hcccceecccccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCh
Q 039819 383 TGMRALEFGKSINQKGAMLEWVKKIQQ------EKKVEVLVDRELGS-----NYDRIEVGEILQVALLCTQYLPVHRPKM 451 (534)
Q Consensus 383 tG~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~~l~~-----~~~~~~~~~l~~l~~~Cl~~~P~~RPt~ 451 (534)
+|+.||......+....+......... ........-+.... .++...+..+.+++.+|++.+|.+|||+
T Consensus 237 ~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 316 (383)
T 3eb0_A 237 LGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINP 316 (383)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence 999999865433222212111100000 00000000001100 0122234578999999999999999999
Q ss_pred HHHHH
Q 039819 452 SEVVR 456 (534)
Q Consensus 452 ~ev~~ 456 (534)
.|+++
T Consensus 317 ~e~l~ 321 (383)
T 3eb0_A 317 YEAMA 321 (383)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99985
No 165
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.2e-40 Score=335.62 Aligned_cols=263 Identities=22% Similarity=0.355 Sum_probs=196.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
.++|...+.||+|+||.||+|+.. +++.||||++. +++..++||||+++++++.+....++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357888899999999999999986 58999999873 2577889999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 104 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 179 (331)
T 4aaa_A 104 EFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE- 179 (331)
T ss_dssp ECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred ecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-
Confidence 9999999999888777899999999999999999999999 999999999999999999999999999987643322
Q ss_pred eeeccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHH--------HHHHhhhcccc
Q 039819 344 VTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW--------VKKIQQEKKVE 414 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 414 (534)
......||..|+|||++.+. .++.++|||||||++|||+||+.||...........+... ...........
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 23345689999999998765 6899999999999999999999999765432211111110 00001111111
Q ss_pred eecccccCCCCCH-----HHHHHHHHHHHHhcccCCCCCCChHHHHH--HhhcCCchhhH
Q 039819 415 VLVDRELGSNYDR-----IEVGEILQVALLCTQYLPVHRPKMSEVVR--MLEGDGLAEKW 467 (534)
Q Consensus 415 ~~~d~~l~~~~~~-----~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~--~L~~~~~~~~~ 467 (534)
....+.+...... ..+..+.+++.+|++.||.+|||+.|+++ .++..+..+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~ 319 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERF 319 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGGHHHHH
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccCChhhhh
Confidence 1111111111111 12457899999999999999999999986 34444434433
No 166
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=5.6e-40 Score=325.51 Aligned_cols=235 Identities=22% Similarity=0.304 Sum_probs=185.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
.++|...+.||+|+||.||+|+.. ++..||+|++.. ++..++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 357888899999999999999975 688999998752 5778899999999999999999999999
Q ss_pred ccCCCChhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe---CCCCcEEEEecccceec
Q 039819 265 YMSNGSVASRLRE----KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLL 337 (534)
Q Consensus 265 ~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl---~~~~~~kl~DFGla~~~ 337 (534)
|+++|+|.+.+.. ...+++..+..|+.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999998853 46799999999999999999999999 99999999999999 55688999999999876
Q ss_pred CCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceec
Q 039819 338 DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLV 417 (534)
Q Consensus 338 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (534)
.... ......||..|+|||++. +.++.++|||||||++|||++|+.||..... .+............
T Consensus 178 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~-------~~~~~~~~~~~~~~--- 244 (285)
T 3is5_A 178 KSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL-------EEVQQKATYKEPNY--- 244 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCC---
T ss_pred CCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH-------HHHHhhhccCCccc---
Confidence 4332 234456899999999885 5689999999999999999999999974321 11111111111000
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 418 DRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 418 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
... ... ....+.+++.+|++.+|++|||+.|+++
T Consensus 245 ~~~-~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 245 AVE-CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CC---CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ccc-cCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 001 2347889999999999999999999985
No 167
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.5e-40 Score=328.69 Aligned_cols=229 Identities=23% Similarity=0.385 Sum_probs=187.3
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhc-ccCceeeEEEEEeCCCeeEE
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLA-VHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~-~h~niv~l~~~~~~~~~~~l 261 (534)
..++|...+.||+|+||.||+|+.. +++.||||++.. .+..+ .||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4578999999999999999999986 789999998752 33444 89999999999999999999
Q ss_pred EeeccCCCChhhhcccC----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC---------------
Q 039819 262 VYPYMSNGSVASRLREK----PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD--------------- 322 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~----~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~--------------- 322 (534)
||||+++|+|.+++... ..+++..++.|+.|++.||.|||++ +|+||||||+|||++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999999999753 6799999999999999999999999 9999999999999984
Q ss_pred ----CCcEEEEecccceecCCCCCceeeccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCcCCCcccccc
Q 039819 323 ----FCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGMRALEFGKSINQK 397 (534)
Q Consensus 323 ----~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~ 397 (534)
...+||+|||.+....... ...||..|+|||++.+. .++.++|||||||++|||++|++++....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----- 235 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----- 235 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----
Confidence 4479999999998775432 23589999999999765 56789999999999999999988764221
Q ss_pred chHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 398 GAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.+. .... ... +.+... .+..+.+++.+|++.+|.+|||+.|+++
T Consensus 236 ----~~~-~~~~-~~~-----~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 ----QWH-EIRQ-GRL-----PRIPQV----LSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ----HHH-HHHT-TCC-----CCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HHH-HHHc-CCC-----CCCCcc----cCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111 1111 111 111112 2357899999999999999999999985
No 168
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=337.14 Aligned_cols=239 Identities=25% Similarity=0.397 Sum_probs=186.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCc----EEEEEEeh---------------hhhhhcccCceeeEEEEEeCCCeeEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGT----VLAVKRLK---------------DMISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
++|...+.||+|+||.||+|+.. ++. .||+|.+. .++..++||||++++++|.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 57888899999999999999964 343 36788763 2677889999999999998765 789
Q ss_pred EeeccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC
Q 039819 262 VYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~ 340 (534)
|+||+++|+|.+++.. ...+++..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 9999999999999975 45799999999999999999999999 9999999999999999999999999999876433
Q ss_pred CC-ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecc
Q 039819 341 DS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVD 418 (534)
Q Consensus 341 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 418 (534)
.. .......+|..|+|||++.+..++.++|||||||++|||+| |+.||...... .+...+ ....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~---~~~~------- 236 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS----EISSIL---EKGE------- 236 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG----GHHHHH---HTTC-------
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH----HHHHHH---HcCC-------
Confidence 22 12233456889999999999999999999999999999999 99999753321 111111 1111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 419 RELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 419 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
....+...+..+.+++.+||+.+|.+||++.|+++.|+..
T Consensus 237 ---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 237 ---RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp ---CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111222345789999999999999999999999998864
No 169
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=9.5e-40 Score=322.04 Aligned_cols=232 Identities=19% Similarity=0.263 Sum_probs=193.2
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh--------------hhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~--------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
.++|...+.||+|+||.||+|... ++..||+|++.. ++..++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 467889999999999999999986 477899998752 57788999999999999999999999999
Q ss_pred cCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe---CCCCcEEEEecccceecCCCCC
Q 039819 266 MSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 266 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl---~~~~~~kl~DFGla~~~~~~~~ 342 (534)
+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~- 163 (277)
T 3f3z_A 88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK- 163 (277)
T ss_dssp CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS-
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc-
Confidence 99999999998888899999999999999999999999 99999999999999 888999999999998765432
Q ss_pred ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
......||+.|+|||++.+ .++.++||||||+++|||+||+.||...... +..........
T Consensus 164 -~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~---------- 224 (277)
T 3f3z_A 164 -MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS-------EVMLKIREGTF---------- 224 (277)
T ss_dssp -CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-------HHHHHHHHCCC----------
T ss_pred -chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH-------HHHHHHHhCCC----------
Confidence 2334569999999998855 5899999999999999999999999743321 11111111110
Q ss_pred CCCCH----HHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDR----IEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~----~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..+. ..+..+.+++.+|++.+|.+||++.++++
T Consensus 225 -~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 225 -TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111 12357889999999999999999999875
No 170
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-40 Score=330.01 Aligned_cols=239 Identities=26% Similarity=0.377 Sum_probs=193.3
Q ss_pred hCCCcCC-eeccCCcEEEEEEEEC---CCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 202 ENFSSKN-ILGAGGFGNVYKGKLG---DGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 202 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
++|...+ .||+|+||.||+|.+. ++..||||.+.. ++..++||||+++++++. .+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEE
Confidence 4455555 8999999999999864 578899999852 567789999999999994 5568999
Q ss_pred eeccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 263 YPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 999999999999864 45699999999999999999999999 99999999999999999999999999999875433
Q ss_pred Cce--eeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecc
Q 039819 342 SHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVD 418 (534)
Q Consensus 342 ~~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 418 (534)
... .....||..|+|||++.+..++.++|||||||++|||+| |+.||...... +....+.....
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-------~~~~~i~~~~~------ 231 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-------EVMAFIEQGKR------ 231 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-------HHHHHHHTTCC------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-------HHHHHHhcCCc------
Confidence 221 223346889999999988889999999999999999999 99999743221 11111111110
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 419 RELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 419 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
...+...+..+.+++.+|++.+|.+||++.++++.|+..
T Consensus 232 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 232 ----MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp ----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111222345899999999999999999999999998864
No 171
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4.5e-40 Score=339.04 Aligned_cols=231 Identities=24% Similarity=0.285 Sum_probs=184.5
Q ss_pred CCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------hhhhhcccCceeeEEEEEeCCCeeEEEeeccCCCCh
Q 039819 207 KNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCATPTERLLVYPYMSNGSV 271 (534)
Q Consensus 207 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 271 (534)
.+.||+|+||.||+|+.. +++.||||++. +++..++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 567999999999999974 68999999875 267788999999999999999999999999999999
Q ss_pred hhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe--CCCCcEEEEecccceecCCCCCceeecc
Q 039819 272 ASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL--DDFCEAIVGDFGLAKLLDHSDSHVTTAV 348 (534)
Q Consensus 272 ~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl--~~~~~~kl~DFGla~~~~~~~~~~~~~~ 348 (534)
.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++...... .....
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~~~~ 248 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KLKVN 248 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BCCCC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--ccccc
Confidence 9988643 4699999999999999999999999 99999999999999 677899999999999775432 23345
Q ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCCHH
Q 039819 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRI 428 (534)
Q Consensus 349 ~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 428 (534)
.||+.|+|||++.+..++.++|||||||++|||+||+.||...... +....+..... . ........
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-------~~~~~i~~~~~--~-~~~~~~~~---- 314 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-------ETLNNILACRW--D-LEDEEFQD---- 314 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHHTCC--C-SCSGGGTT----
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHHhccC--C-CChhhhcc----
Confidence 6999999999998888999999999999999999999999754321 11111111110 0 00111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 429 EVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 429 ~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
....+.+++.+|++.+|.+||++.|+++
T Consensus 315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 315 ISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2357899999999999999999999987
No 172
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.3e-40 Score=339.75 Aligned_cols=231 Identities=29% Similarity=0.412 Sum_probs=189.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh-----------------hhhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK-----------------DMISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~-----------------~~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
.+.|...+.||+|+||.||+|+. .+++.||||++. +++..++||||+++++++......++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35588889999999999999997 578999999874 157788999999999999999999999
Q ss_pred eeccCCCChhhhcc-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 263 YPYMSNGSVASRLR-EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 263 ~e~~~~gsL~~~l~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
|||+. |+|.+.+. ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 99997 67877775 456799999999999999999999999 9999999999999999999999999999876432
Q ss_pred Cceeeccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecc
Q 039819 342 SHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVD 418 (534)
Q Consensus 342 ~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 418 (534)
....||+.|+|||++. .+.++.++|||||||++|||+||+.||..... ............
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~-------~~~~~~~~~~~~------ 270 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-------MSALYHIAQNES------ 270 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSCC------
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHhcCC------
Confidence 2356999999999984 56789999999999999999999999964321 111122211111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 419 RELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 419 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+... ....+..+.+++.+||+.+|++|||++++++
T Consensus 271 ~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 271 PALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp CCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCC---CCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1111 1112347889999999999999999999985
No 173
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.3e-40 Score=365.34 Aligned_cols=232 Identities=28% Similarity=0.388 Sum_probs=187.6
Q ss_pred CeeccCCcEEEEEEEEC---CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCeeEEEeeccCC
Q 039819 208 NILGAGGFGNVYKGKLG---DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTERLLVYPYMSN 268 (534)
Q Consensus 208 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~~ 268 (534)
+.||+|+||.||+|.+. .++.||||+++. ++..++|||||+++++|.. +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999763 467899998862 5778899999999999975 457899999999
Q ss_pred CChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC--ceee
Q 039819 269 GSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS--HVTT 346 (534)
Q Consensus 269 gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~--~~~~ 346 (534)
|+|.+++.....+++..++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+++....... ....
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 99999999888899999999999999999999999 999999999999999999999999999987654322 1223
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCC
Q 039819 347 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNY 425 (534)
Q Consensus 347 ~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 425 (534)
...+|..|+|||++.+..++.++|||||||++|||+| |+.||...... +....+..... ...
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------~~~~~i~~~~~----------~~~ 593 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------EVTAMLEKGER----------MGC 593 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHHHHHHTTCC----------CCC
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCC----------CCC
Confidence 3456789999999999999999999999999999999 99999743321 11122211111 111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 426 DRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 426 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
+...+..+.+++.+||+.+|++||++.+|++.|+.
T Consensus 594 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 594 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 22334689999999999999999999999999875
No 174
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=334.60 Aligned_cols=243 Identities=26% Similarity=0.357 Sum_probs=189.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh--------------hhhhhcccCceeeEEEEEe----CCCeeEEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCA----TPTERLLV 262 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~----~~~~~~lv 262 (534)
++|...+.||+|+||.||+|+. .+++.||||++. +++..++||||+++++++. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 5788889999999999999997 578999999873 2677889999999999987 34467999
Q ss_pred eeccCCCChhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecC
Q 039819 263 YPYMSNGSVASRLRE----KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
|||+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 999999999998864 56799999999999999999999999 99999999999999999999999999988653
Q ss_pred CCCCc--------eeeccccccccccccccccCC---CCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHH
Q 039819 339 HSDSH--------VTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKI 407 (534)
Q Consensus 339 ~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 407 (534)
..... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||+....... ......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~--- 260 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD--SVALAV--- 260 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS--CHHHHH---
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc--hhhHHh---
Confidence 21100 012345799999999986543 68899999999999999999999963111000 011100
Q ss_pred hhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcCC
Q 039819 408 QQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDG 462 (534)
Q Consensus 408 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 462 (534)
.. ..........+..+.+++.+|++.+|.+||++.++++.|+...
T Consensus 261 ~~----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 261 QN----------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HC----------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred hc----------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 00 0000111122457899999999999999999999999998643
No 175
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.4e-40 Score=325.82 Aligned_cols=231 Identities=25% Similarity=0.386 Sum_probs=194.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-----------------hhhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-----------------DMISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. ++..||||.+. +++..++||||+++++++.+....++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 67888999999999999999986 57889999873 1567788999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 168 (284)
T 2vgo_A 94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 168 (284)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC--
T ss_pred EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcccc--
Confidence 9999999999998877899999999999999999999998 99999999999999999999999999997664322
Q ss_pred eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
.....||..|+|||++.+..++.++||||||+++|||++|+.||...... +........ +...
T Consensus 169 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~-------~~~~-- 231 (284)
T 2vgo_A 169 -RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-------ETHRRIVNV-------DLKF-- 231 (284)
T ss_dssp -BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-------HHHHHHHTT-------CCCC--
T ss_pred -cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-------HHHHHHhcc-------ccCC--
Confidence 23456899999999999888999999999999999999999999743221 111111111 1111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 424 NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 424 ~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+...+..+.+++.+|++.+|.+||++.++++
T Consensus 232 --~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 232 --PPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp --CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1222457889999999999999999999985
No 176
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-40 Score=328.75 Aligned_cols=238 Identities=29% Similarity=0.392 Sum_probs=189.1
Q ss_pred CCcCCeeccCCcEEEEEEEEC-C---CcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCee-EEEe
Q 039819 204 FSSKNILGAGGFGNVYKGKLG-D---GTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTER-LLVY 263 (534)
Q Consensus 204 ~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~-~lv~ 263 (534)
|...+.||+|+||.||+|++. + +..||+|.+.. ++..++||||+++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 445688999999999999863 2 23799998752 56778999999999999877665 9999
Q ss_pred eccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC-
Q 039819 264 PYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD- 341 (534)
Q Consensus 264 e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~- 341 (534)
||+.+|+|.+++.. ...+++..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 99999999999976 45689999999999999999999999 99999999999999999999999999998654321
Q ss_pred --CceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 342 --SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 342 --~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
........+|..|+|||.+.+..++.++|||||||++|||+||..|+...... ..+.... .....
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~---~~~~~~~---~~~~~------- 246 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP---FDLTHFL---AQGRR------- 246 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG---GGHHHHH---HTTCC-------
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH---HHHHHHh---hcCCC-------
Confidence 11223456789999999999989999999999999999999966665432211 1111111 11110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
...+...+..+.+++.+|++.+|.+|||+.++++.|+.
T Consensus 247 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 247 ---LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 01111224578999999999999999999999999875
No 177
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-40 Score=342.87 Aligned_cols=238 Identities=30% Similarity=0.472 Sum_probs=180.3
Q ss_pred CCCcCCeeccCCcEEEEEEEEC--CC--cEEEEEEehh---------------hhhhcccCceeeEEEEEeC-CCeeEEE
Q 039819 203 NFSSKNILGAGGFGNVYKGKLG--DG--TVLAVKRLKD---------------MISLAVHRNLLRLIGYCAT-PTERLLV 262 (534)
Q Consensus 203 ~~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~-~~~~~lv 262 (534)
.|...+.||+|+||.||+|++. ++ ..||||.+.. ++..++||||++++++|.. ....++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3556678999999999999863 22 4689998752 5677889999999999765 4577999
Q ss_pred eeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 263 YPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
|||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999754 4689999999999999999999999 99999999999999999999999999998664322
Q ss_pred C---ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceec
Q 039819 342 S---HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLV 417 (534)
Q Consensus 342 ~---~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (534)
. .......+|..|+|||++.+..++.++|||||||++|||+| |.+||....... +...+ ..... .
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~----~~~~~---~~~~~---~- 315 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----ITVYL---LQGRR---L- 315 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC----HHHHH---HTTCC---C-
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH----HHHHH---HcCCC---C-
Confidence 1 11233457889999999999999999999999999999999 677776432211 11111 11110 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 418 DRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 418 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
..+...+..+.+++.+||+.+|.+||++.|+++.|+.
T Consensus 316 ------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~ 352 (373)
T 3c1x_A 316 ------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 352 (373)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 0112234578999999999999999999999999875
No 178
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.3e-40 Score=328.60 Aligned_cols=235 Identities=27% Similarity=0.388 Sum_probs=187.2
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh------------hhhhcccCceeeEEEEEeCC-CeeEEEeeccC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD------------MISLAVHRNLLRLIGYCATP-TERLLVYPYMS 267 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~------------~l~~~~h~niv~l~~~~~~~-~~~~lv~e~~~ 267 (534)
.++|...+.||+|+||.||+|+.. ++.||||.+.. .+..++||||+++++++.+. ...++||||++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 357888899999999999999984 78999998752 67788999999999997655 46899999999
Q ss_pred CCChhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCcee
Q 039819 268 NGSVASRLREKP--ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT 345 (534)
Q Consensus 268 ~gsL~~~l~~~~--~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 345 (534)
+|+|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...... .
T Consensus 99 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----~ 171 (278)
T 1byg_A 99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----Q 171 (278)
T ss_dssp TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc----c
Confidence 999999997543 389999999999999999999999 9999999999999999999999999999865432 2
Q ss_pred eccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCC
Q 039819 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSN 424 (534)
Q Consensus 346 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 424 (534)
....++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .+ ........ .. .
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~----~~---~~~~~~~~------~~----~ 234 (278)
T 1byg_A 172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK----DV---VPRVEKGY------KM----D 234 (278)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG----GH---HHHHTTTC------CC----C
T ss_pred cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH----HH---HHHHhcCC------CC----C
Confidence 23357889999999988899999999999999999998 99999743221 11 11111110 01 1
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 425 YDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 425 ~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
.+...+..+.+++.+|++.+|.+||++.|+++.|+.
T Consensus 235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 270 (278)
T 1byg_A 235 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 270 (278)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHH
Confidence 122234588999999999999999999999999876
No 179
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.6e-40 Score=340.78 Aligned_cols=258 Identities=20% Similarity=0.246 Sum_probs=189.5
Q ss_pred CHHHHHHHHhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh-------------------------hhhhhcccCcee
Q 039819 193 TFRELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK-------------------------DMISLAVHRNLL 247 (534)
Q Consensus 193 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~-------------------------~~l~~~~h~niv 247 (534)
...++....++|...+.||+|+||.||+|...++..||||++. +++..++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4567888899999999999999999999999889999999772 257788999999
Q ss_pred eEEEEEeC-----CCeeEEEeeccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC
Q 039819 248 RLIGYCAT-----PTERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD 321 (534)
Q Consensus 248 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~ 321 (534)
++++++.. ....++||||++ |+|.+.+.. ...+++..+..|+.|++.||.|||+. +|+||||||+|||++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA 168 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc
Confidence 99999843 345799999998 578777764 44799999999999999999999999 999999999999999
Q ss_pred CCCcEEEEecccceecCCCCCceeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchH
Q 039819 322 DFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAM 400 (534)
Q Consensus 322 ~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~ 400 (534)
.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........+
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 246 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246 (362)
T ss_dssp TTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred CCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999999998554322 2334568999999999876 67899999999999999999999999754432221111
Q ss_pred HHHHHHHhhh-------cccceecccccCC-------CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 401 LEWVKKIQQE-------KKVEVLVDRELGS-------NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 401 ~~~~~~~~~~-------~~~~~~~d~~l~~-------~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.+........ ......+...... .........+.+++.+|++.+|.+|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 1111000000 0000000000000 001112347889999999999999999999985
No 180
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.3e-40 Score=362.21 Aligned_cols=230 Identities=25% Similarity=0.324 Sum_probs=192.3
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhc-ccCceeeEEEEEeCCCeeE
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLA-VHRNLLRLIGYCATPTERL 260 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~-~h~niv~l~~~~~~~~~~~ 260 (534)
..++|...+.||+|+||.||+|+.. +++.||||++++ ++..+ .||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3467899999999999999999975 688999999863 23333 6999999999999999999
Q ss_pred EEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC
Q 039819 261 LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~ 340 (534)
+||||+++|+|.+++.....+++..++.|+.||+.||.|||+. +||||||||+|||++.++.+||+|||+++.....
T Consensus 419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 9999999999999999878899999999999999999999999 9999999999999999999999999999864332
Q ss_pred CCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccc
Q 039819 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRE 420 (534)
Q Consensus 341 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 420 (534)
. ......+||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+....+....
T Consensus 496 ~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-------~~~~~~i~~~~--------- 558 (674)
T 3pfq_A 496 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-------DELFQSIMEHN--------- 558 (674)
T ss_dssp T-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHSSC---------
T ss_pred C-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-------HHHHHHHHhCC---------
Confidence 2 234557899999999999999999999999999999999999999975332 12222222111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCh
Q 039819 421 LGSNYDRIEVGEILQVALLCTQYLPVHRPKM 451 (534)
Q Consensus 421 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~ 451 (534)
..++.....++.+++.+|++.||.+||++
T Consensus 559 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 559 --VAYPKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred --CCCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence 01222234588999999999999999998
No 181
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.2e-39 Score=332.99 Aligned_cols=244 Identities=22% Similarity=0.356 Sum_probs=196.9
Q ss_pred HHHHHHHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------------hhhhc-ccCceeeE
Q 039819 194 FRELQQATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------------MISLA-VHRNLLRL 249 (534)
Q Consensus 194 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------------~l~~~-~h~niv~l 249 (534)
+.......++|...+.||+|+||.||+|+.. +|+.||||++.. ++..+ .||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444556688999999999999999999985 799999997631 34455 79999999
Q ss_pred EEEEeCCCeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEE
Q 039819 250 IGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVG 329 (534)
Q Consensus 250 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~ 329 (534)
++++......++||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEE
Confidence 999999999999999999999999998877899999999999999999999998 99999999999999999999999
Q ss_pred ecccceecCCCCCceeecccccccccccccccc------CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHH
Q 039819 330 DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLST------GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW 403 (534)
Q Consensus 330 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~ 403 (534)
|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ...
T Consensus 243 DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-------~~~ 313 (365)
T 2y7j_A 243 DFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-------ILM 313 (365)
T ss_dssp CCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHH
T ss_pred ecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-------HHH
Confidence 999998775432 2344679999999999853 3578899999999999999999999964321 111
Q ss_pred HHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 404 VKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 404 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...+.... .. ...+.. . ..+..+.+++.+|++.+|++||++.|+++
T Consensus 314 ~~~i~~~~-~~-~~~~~~-~----~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 314 LRMIMEGQ-YQ-FSSPEW-D----DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHHTC-CC-CCHHHH-S----SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhCC-CC-CCCccc-c----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111110 00 000000 0 11346889999999999999999999986
No 182
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.1e-39 Score=322.45 Aligned_cols=237 Identities=22% Similarity=0.285 Sum_probs=192.1
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------------hhhhhcccCceeeEEEEEeCCCee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------------DMISLAVHRNLLRLIGYCATPTER 259 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------------~~l~~~~h~niv~l~~~~~~~~~~ 259 (534)
.++|...+.||+|+||.||+|+.. +++.||||.+. .++..++||||+++++++.+....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356888999999999999999986 68999999864 156788899999999999999999
Q ss_pred EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC----cEEEEecccce
Q 039819 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----EAIVGDFGLAK 335 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~----~~kl~DFGla~ 335 (534)
++||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||++.
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999999998877899999999999999999999999 999999999999998877 89999999998
Q ss_pred ecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccce
Q 039819 336 LLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEV 415 (534)
Q Consensus 336 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
...... ......||+.|+|||++.+..++.++||||||+++|||+||+.||..... .+..........
T Consensus 161 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~--- 228 (283)
T 3bhy_A 161 KIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-------QETLTNISAVNY--- 228 (283)
T ss_dssp ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-------HHHHHHHHTTCC---
T ss_pred eccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-------HHHHHHhHhccc---
Confidence 765432 22345689999999999888999999999999999999999999974321 111111111100
Q ss_pred ecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 416 LVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 416 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..+..... ..+..+.+++.+|++.+|.+||++.|+++
T Consensus 229 ~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 229 DFDEEYFS----NTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCcchhcc----cCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 00000001 12347889999999999999999999986
No 183
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=363.42 Aligned_cols=231 Identities=26% Similarity=0.382 Sum_probs=185.8
Q ss_pred eeccCCcEEEEEEEEC---CCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCeeEEEeeccCCCC
Q 039819 209 ILGAGGFGNVYKGKLG---DGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTERLLVYPYMSNGS 270 (534)
Q Consensus 209 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~~gs 270 (534)
.||+|+||.||+|.+. ++..||||+++. ++..++|||||+++++|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999874 467799998852 6778899999999999986 56899999999999
Q ss_pred hhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCce--eec
Q 039819 271 VASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV--TTA 347 (534)
Q Consensus 271 L~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~--~~~ 347 (534)
|.+++.. ...+++..++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+++......... ...
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 9999974 45699999999999999999999999 99999999999999999999999999998764332211 122
Q ss_pred cccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCC
Q 039819 348 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYD 426 (534)
Q Consensus 348 ~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 426 (534)
..+|..|+|||++.+..++.++|||||||++|||+| |+.||...... +....+..... ...+
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------~~~~~i~~~~~----------~~~p 561 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-------EVMAFIEQGKR----------MECP 561 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-------HHHHHHHTTCC----------CCCC
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHHHHHcCCC----------CCCC
Confidence 335689999999998999999999999999999998 99999753321 11122221111 1122
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 427 RIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 427 ~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
...+..+.+++.+||+.+|++||++.+|++.|+.
T Consensus 562 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 562 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 2345689999999999999999999999999875
No 184
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=8.9e-41 Score=344.86 Aligned_cols=224 Identities=12% Similarity=0.134 Sum_probs=179.3
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh--------------------hhhhhcccCceeeEE-------EEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK--------------------DMISLAVHRNLLRLI-------GYC 253 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~--------------------~~l~~~~h~niv~l~-------~~~ 253 (534)
++|...+.||+|+||.||+|+. .+++.||||++. +.++.++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 5677789999999999999996 568999999974 135556899999998 666
Q ss_pred eCCCe-----------------eEEEeeccCCCChhhhcccCCCC-------CHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 039819 254 ATPTE-----------------RLLVYPYMSNGSVASRLREKPAL-------DWNTRKRIAIGAARGLLYLHEQCDPKII 309 (534)
Q Consensus 254 ~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~~l-------~~~~~~~i~~~i~~~l~yLH~~~~~~iv 309 (534)
.+++. .++||||+ +|+|.+++.....+ ++..++.|+.|++.||+|||++ +|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 228 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 228 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 65532 78999999 68999999754333 3588899999999999999999 999
Q ss_pred eccCCCCcEEeCCCCcEEEEecccceecCCCCCceeeccccccccccccccccC-----------CCCcchhHHHHHHHH
Q 039819 310 HRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG-----------QSSEKTDVFGFGILL 378 (534)
Q Consensus 310 H~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~k~Dv~S~Gvvl 378 (534)
||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 999999999999999999999999986432 3445668 999999999877 899999999999999
Q ss_pred HHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 379 LELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 379 ~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
|||+||+.||......... ..+.. . .... +..+.+++.+||+.||.+||++.|+++
T Consensus 304 ~elltg~~Pf~~~~~~~~~----------------~~~~~-~-~~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALGGS----------------EWIFR-S-CKNI----PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------CCS----------------GGGGS-S-CCCC----CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCcccccccch----------------hhhhh-h-ccCC----CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999643221110 00000 0 0112 347889999999999999999999986
No 185
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.3e-40 Score=328.06 Aligned_cols=247 Identities=21% Similarity=0.331 Sum_probs=191.5
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
++|...+.||+|+||.||+|+.. +++.||||++. ..+..++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888899999999999999986 68999999874 25678889999999999999999999999
Q ss_pred ccCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC
Q 039819 265 YMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 265 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 342 (534)
|+. |+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 998 6999988754 5689999999999999999999999 99999999999999999999999999998764322
Q ss_pred ceeeccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcc-----cce-
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKK-----VEV- 415 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~-~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~- 415 (534)
.......||..|+|||++.+.. ++.++|||||||++|||+||+.||........ +............ ...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ---LFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCCCTTTSTTGGGS
T ss_pred cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHHHHhCCCchhhhhHhhcC
Confidence 1223346899999999987765 78999999999999999999999975433211 1111111110000 000
Q ss_pred -ecccccCC----CC---CHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 416 -LVDRELGS----NY---DRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 416 -~~d~~l~~----~~---~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...+.... .+ ....+..+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 00 0112357889999999999999999999985
No 186
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.3e-39 Score=329.28 Aligned_cols=245 Identities=19% Similarity=0.230 Sum_probs=189.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh-----------hhhhcc-cCceeeEEEEEeC--CCeeEEEeecc
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD-----------MISLAV-HRNLLRLIGYCAT--PTERLLVYPYM 266 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~-----------~l~~~~-h~niv~l~~~~~~--~~~~~lv~e~~ 266 (534)
++|...+.||+|+||.||+|+. .+++.||||++.. ++..++ ||||+++++++.+ ....++||||+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~ 115 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV 115 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEecc
Confidence 5788889999999999999987 5789999999862 566776 9999999999988 56789999999
Q ss_pred CCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC-cEEEEecccceecCCCCCcee
Q 039819 267 SNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC-EAIVGDFGLAKLLDHSDSHVT 345 (534)
Q Consensus 267 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~-~~kl~DFGla~~~~~~~~~~~ 345 (534)
++++|.+++.. +++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||+++....... .
T Consensus 116 ~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~ 187 (330)
T 3nsz_A 116 NNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--Y 187 (330)
T ss_dssp CCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--C
T ss_pred CchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc--c
Confidence 99999998853 89999999999999999999999 999999999999999776 899999999987654332 3
Q ss_pred ecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhh--------cc----
Q 039819 346 TAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQE--------KK---- 412 (534)
Q Consensus 346 ~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~---- 412 (534)
....||..|+|||++.+ ..++.++|||||||++|||+||+.||..+.... ..+.......... ..
T Consensus 188 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~ 265 (330)
T 3nsz_A 188 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY--DQLVRIAKVLGTEDLYDYIDKYNIELD 265 (330)
T ss_dssp CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH--HHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH--HHHHHHHHhcCCchhhhHHHHhccccc
Confidence 34568999999999876 668999999999999999999999996433211 1111111110000 00
Q ss_pred ----------cceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 413 ----------VEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 413 ----------~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
....................+.+++.+|++.||.+|||++|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000001111111223568899999999999999999999985
No 187
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.3e-40 Score=328.40 Aligned_cols=244 Identities=23% Similarity=0.348 Sum_probs=186.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh-----------------hhhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK-----------------DMISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~-----------------~~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
.++|...+.||+|+||.||+|.. .+++.||||++. ..+..++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35788889999999999999997 478999999874 156778899999999999999999999
Q ss_pred eeccCCCChhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecC
Q 039819 263 YPYMSNGSVASRLRE----KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
|||+++|+|.+++.. ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999998863 56699999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecc
Q 039819 339 HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVD 418 (534)
Q Consensus 339 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 418 (534)
.... ......||..|+|||++.+..++.++|||||||++|||++|+.||..... ....+......... .
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~-~---- 256 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSLCKKIEQCDY-P---- 256 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C-----CHHHHHHHHHTTCS-C----
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch-----hHHHHHHHhhcccC-C----
Confidence 3321 22345689999999999988999999999999999999999999964321 11222222222111 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcCC
Q 039819 419 RELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDG 462 (534)
Q Consensus 419 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 462 (534)
.. .....+..+.+++.+|++.||.+||++.+|++.|+...
T Consensus 257 -~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 257 -PL---PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp -CC---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CC---cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 00 01122347899999999999999999999999998643
No 188
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.2e-40 Score=328.92 Aligned_cols=239 Identities=30% Similarity=0.443 Sum_probs=187.5
Q ss_pred hCCCcCCeeccCCcEEEEEEEECC----CcEEEEEEehh---------------hhhhcccCceeeEEEEEeC-CCeeEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGD----GTVLAVKRLKD---------------MISLAVHRNLLRLIGYCAT-PTERLL 261 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~-~~~~~l 261 (534)
.+|...+.||+|+||.||+|+..+ ...||||.+.. ++..++||||++++++|.. ....++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 356777899999999999998643 23689998752 6778899999999999654 557799
Q ss_pred EeeccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC
Q 039819 262 VYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~ 340 (534)
||||+++|+|.+++.. ...+++..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccccc
Confidence 9999999999999975 45689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CC---ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhccccee
Q 039819 341 DS---HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVL 416 (534)
Q Consensus 341 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (534)
.. .......||+.|+|||.+.+..++.++|||||||++|||+| |.+||....... ... .......
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~----~~~---~~~~~~~---- 250 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----ITV---YLLQGRR---- 250 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT----HHH---HHHTTCC----
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH----HHH---HHhcCCC----
Confidence 21 12234457889999999988899999999999999999999 555554322111 111 1111110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 417 VDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 417 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
...+...+..+.+++.+|++.+|.+||++.|+++.|+.
T Consensus 251 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 288 (298)
T 3f66_A 251 ------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288 (298)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 00111223578999999999999999999999999875
No 189
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.2e-40 Score=341.58 Aligned_cols=250 Identities=22% Similarity=0.308 Sum_probs=192.5
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
++|...+.||+|+||.||+|+.. ++..||+|++. .++..++||||+++++++......++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 57888899999999999999986 68999999874 267788999999999999999999999999
Q ss_pred cCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCcee
Q 039819 266 MSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT 345 (534)
Q Consensus 266 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 345 (534)
+++|+|.+++.....+++..+..++.+++.||.|||+.. +|+||||||+|||++.++.+||+|||++...... ..
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~ 187 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MA 187 (360)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---C-
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc---cc
Confidence 999999999988778999999999999999999999842 7999999999999999999999999999755321 12
Q ss_pred eccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHH-HHHHHHh----------------
Q 039819 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML-EWVKKIQ---------------- 408 (534)
Q Consensus 346 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~-~~~~~~~---------------- 408 (534)
....||+.|+|||++.+..++.++|||||||++|||+||+.||...........+. .......
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence 34568999999999999899999999999999999999999997533211000000 0000000
Q ss_pred -----hhcc----cceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 409 -----QEKK----VEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 409 -----~~~~----~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.... ...+.............+..+.+++.+|++.+|.+|||++|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000 00000000000011112447899999999999999999999985
No 190
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.5e-40 Score=334.50 Aligned_cols=237 Identities=27% Similarity=0.418 Sum_probs=191.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcE--EEEEEehh---------------hhhhc-ccCceeeEEEEEeCCCeeEEE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTV--LAVKRLKD---------------MISLA-VHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~---------------~l~~~-~h~niv~l~~~~~~~~~~~lv 262 (534)
++|...+.||+|+||.||+|+.. ++.. ||||++.. ++..+ .||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888899999999999999874 4554 48998752 56677 899999999999999999999
Q ss_pred eeccCCCChhhhcccCC----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcE
Q 039819 263 YPYMSNGSVASRLREKP----------------ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEA 326 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~ 326 (534)
|||+++|+|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999997543 699999999999999999999999 99999999999999999999
Q ss_pred EEEecccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHH
Q 039819 327 IVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVK 405 (534)
Q Consensus 327 kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 405 (534)
||+|||+++...... ......++..|+|||++.+..++.++|||||||++|||+| |+.||..... .+...
T Consensus 182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-------~~~~~ 252 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-------AELYE 252 (327)
T ss_dssp EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHH
T ss_pred EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-------HHHHH
Confidence 999999997443211 1223446889999999988889999999999999999998 9999974321 12222
Q ss_pred HHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 406 KIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 406 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
....... . ..+...+..+.+++.+|++.+|.+||++.|+++.|..
T Consensus 253 ~~~~~~~------~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 297 (327)
T 1fvr_A 253 KLPQGYR------L----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 297 (327)
T ss_dssp HGGGTCC------C----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HhhcCCC------C----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 2211110 1 1112234578999999999999999999999998875
No 191
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.6e-40 Score=328.04 Aligned_cols=236 Identities=22% Similarity=0.314 Sum_probs=179.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
.++|+..+.||+|+||.||+|+. .+++.||||++.. .+....||||+++++++.+....++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46788899999999999999997 4789999998852 366788999999999999999999999
Q ss_pred eccCCCChhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 264 PYMSNGSVASRLR----EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 264 e~~~~gsL~~~l~----~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
||+++ +|.+++. ....+++..++.|+.|++.||.|||+++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99974 8877764 4567999999999999999999999853 899999999999999999999999999987654
Q ss_pred CCCceeecccccccccccccc----ccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccce
Q 039819 340 SDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEV 415 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
.. ......||+.|+|||++ .+..++.++|||||||++|||+||+.||+..... ...+ ........
T Consensus 163 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~-~~~~~~~~--- 231 (290)
T 3fme_A 163 DV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-----FQQL-KQVVEEPS--- 231 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-----HHHH-HHHHHSCC---
T ss_pred cc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-----HHHH-HHHhccCC---
Confidence 32 22334689999999996 4567899999999999999999999999742211 1111 11111111
Q ss_pred ecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 416 LVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 416 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+.. .....+..+.+++.+|++.+|++|||+.|+++
T Consensus 232 ---~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 ---PQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---CCC---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCc---ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 000 11122457899999999999999999999975
No 192
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.7e-40 Score=331.95 Aligned_cols=240 Identities=27% Similarity=0.423 Sum_probs=184.0
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC----CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCe--
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG----DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTE-- 258 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~-- 258 (534)
.++|...+.||+|+||.||+|... .+..||||++. ..+..++||||+++++++.+...
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 467888899999999999999864 34589999875 15678889999999999987653
Q ss_pred ---eEEEeeccCCCChhhhcc------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEE
Q 039819 259 ---RLLVYPYMSNGSVASRLR------EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVG 329 (534)
Q Consensus 259 ---~~lv~e~~~~gsL~~~l~------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~ 329 (534)
.++||||+++|+|.+++. ....+++..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEe
Confidence 499999999999999983 345699999999999999999999998 99999999999999999999999
Q ss_pred ecccceecCCCCC-ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHH
Q 039819 330 DFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKI 407 (534)
Q Consensus 330 DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 407 (534)
|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||+| |+.||...... .+.. ..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~----~~~~---~~ 262 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH----EMYD---YL 262 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG----GHHH---HH
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH----HHHH---HH
Confidence 9999987643321 12233457889999999999899999999999999999999 88898743321 1111 11
Q ss_pred hhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 408 QQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 408 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
..... .. .+...+..+.+++.+|++.+|.+||++.++++.|+.
T Consensus 263 ~~~~~------~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 263 LHGHR------LK----QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp HTTCC------CC----CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HcCCC------CC----CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11110 01 112234578999999999999999999999999875
No 193
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.6e-40 Score=325.51 Aligned_cols=231 Identities=25% Similarity=0.391 Sum_probs=186.8
Q ss_pred CCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeC----CCeeEEE
Q 039819 204 FSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCAT----PTERLLV 262 (534)
Q Consensus 204 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~----~~~~~lv 262 (534)
|...+.||+|+||.||+|... ++..||+|.+.. ++..++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 556678999999999999875 678999998742 5778899999999999865 3457999
Q ss_pred eeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeccCCCCcEEeC-CCCcEEEEecccceecCC
Q 039819 263 YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPK--IIHRDVKAANVLLD-DFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivH~Dlkp~NiLl~-~~~~~kl~DFGla~~~~~ 339 (534)
|||+++|+|.+++.....+++..++.|+.|++.||.|||+. + |+||||||+|||++ .++.+||+|||++.....
T Consensus 108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 99999999999998878899999999999999999999998 7 99999999999998 789999999999976543
Q ss_pred CCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
. ......||+.|+|||++. +.++.++|||||||++|||+||+.||..... .............. .
T Consensus 185 ~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~-----~ 249 (290)
T 1t4h_A 185 S---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN------AAQIYRRVTSGVKP-----A 249 (290)
T ss_dssp T---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS------HHHHHHHHTTTCCC-----G
T ss_pred c---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc------HHHHHHHHhccCCc-----c
Confidence 2 233456999999999886 5689999999999999999999999974322 11222222111110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
. .+......+.+++.+|++.+|.+|||+.|+++
T Consensus 250 ~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 250 S----FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G----GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c----cCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0 11112347899999999999999999999985
No 194
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.4e-39 Score=320.59 Aligned_cols=232 Identities=24% Similarity=0.388 Sum_probs=185.9
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +++.||||.+.. .+..++||||+++++++......++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57888899999999999999986 789999998742 467788999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 165 (276)
T 2h6d_A 91 EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-- 165 (276)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred eccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc--
Confidence 9999999999998777899999999999999999999999 99999999999999999999999999998765432
Q ss_pred eeeccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||..... ........... ..+
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~-------~~~- 230 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-------PTLFKKIRGGV-------FYI- 230 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCC-------CCC-
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-------HHHHHHhhcCc-------ccC-
Confidence 2234568999999999987665 6899999999999999999999974321 11112111110 001
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+......+.+++.+|++.+|.+|||+.|+++
T Consensus 231 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 231 ---PEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp ---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---chhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1112347889999999999999999999986
No 195
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=6.2e-40 Score=331.01 Aligned_cols=251 Identities=22% Similarity=0.361 Sum_probs=190.7
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEE--CCCcEEEEEEehh----------------hhh---hcccCceeeEEEEEe----
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKL--GDGTVLAVKRLKD----------------MIS---LAVHRNLLRLIGYCA---- 254 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~----------------~l~---~~~h~niv~l~~~~~---- 254 (534)
+.++|...+.||+|+||.||+|+. .+++.||||++.. .+. .+.||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999998 4688999998741 233 348999999999987
Q ss_pred -CCCeeEEEeeccCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEec
Q 039819 255 -TPTERLLVYPYMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDF 331 (534)
Q Consensus 255 -~~~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DF 331 (534)
.....++||||++ |+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 5567899999998 6999998754 3499999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhc
Q 039819 332 GLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEK 411 (534)
Q Consensus 332 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 411 (534)
|+++..... .......||..|+|||++.+..++.++|||||||++|||+||+.||...........+...........
T Consensus 165 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 165 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242 (326)
T ss_dssp CSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred cccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCccc
Confidence 999865432 123345689999999999988999999999999999999999999975443221111111100000000
Q ss_pred cccee------ccc---ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 412 KVEVL------VDR---ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 412 ~~~~~------~d~---~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..... +.. ..........+..+.+++.+|++.+|.+||++.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 000 0000111123457889999999999999999999985
No 196
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.4e-40 Score=337.11 Aligned_cols=245 Identities=23% Similarity=0.313 Sum_probs=172.4
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCC------Ce
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATP------TE 258 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~------~~ 258 (534)
++|...+.||+|+||.||+|... +|+.||||++. +++..++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 67888999999999999999864 68999999874 267788999999999999754 55
Q ss_pred eEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecC
Q 039819 259 RLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 259 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
.++||||+ +++|.+++.. ..+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 6899988875 5699999999999999999999998 99999999999999999999999999998654
Q ss_pred CCCCceeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhh--ccc--
Q 039819 339 HSDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQE--KKV-- 413 (534)
Q Consensus 339 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~-- 413 (534)
.. .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........+...+.....+ ..+
T Consensus 184 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 184 DE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCC
T ss_pred cc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 32 334578999999999876 678999999999999999999999998654332222222111100000 000
Q ss_pred ---ceecccccC--CCCCH-----HHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 414 ---EVLVDRELG--SNYDR-----IEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 414 ---~~~~d~~l~--~~~~~-----~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...+. .+. ..... .....+.+++.+|++.||.+|||+.|+++
T Consensus 260 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 260 ESARNYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHHHHH-TSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHh-ccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00000 000 00000 11347889999999999999999999985
No 197
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.3e-39 Score=332.61 Aligned_cols=250 Identities=20% Similarity=0.323 Sum_probs=190.2
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCC-----Cee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATP-----TER 259 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~-----~~~ 259 (534)
.++|...+.||+|+||.||+|... ++..||||++. +++..++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457888999999999999999975 68889999885 267788999999999999765 367
Q ss_pred EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
++||||+. |+|.+++... .+++..+..|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEEcccC-cCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 99999997 5899888754 599999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCc--eeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhccccee
Q 039819 340 SDSH--VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVL 416 (534)
Q Consensus 340 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (534)
.... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........+........... ....
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~ 259 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED-LNCI 259 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH-HHTC
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH-HHHh
Confidence 2211 1234579999999998754 4589999999999999999999999976543332222211110000000 0000
Q ss_pred ---------cccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 417 ---------VDRELGSNYD-----RIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 417 ---------~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.........+ ......+.+++.+|++.||.+|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 112347889999999999999999999985
No 198
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=334.42 Aligned_cols=236 Identities=25% Similarity=0.313 Sum_probs=172.2
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------hhhhhcc-cCceeeEEEEEe--------CCC
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------DMISLAV-HRNLLRLIGYCA--------TPT 257 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------~~l~~~~-h~niv~l~~~~~--------~~~ 257 (534)
.+|...+.||+|+||.||+|+.. +++.||||++. ..+..+. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 46788899999999999999975 78999999873 1455664 999999999994 334
Q ss_pred eeEEEeeccCCCChhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeccCCCCcEEeCCCCcEEEEecc
Q 039819 258 ERLLVYPYMSNGSVASRLRE---KPALDWNTRKRIAIGAARGLLYLHEQCDPK--IIHRDVKAANVLLDDFCEAIVGDFG 332 (534)
Q Consensus 258 ~~~lv~e~~~~gsL~~~l~~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivH~Dlkp~NiLl~~~~~~kl~DFG 332 (534)
..++||||+. |+|.+++.. ...+++..++.|+.|++.||.|||+. + |+||||||+|||++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCc
Confidence 5789999996 799888863 56799999999999999999999998 7 9999999999999999999999999
Q ss_pred cceecCCCCCc-----------eeecccccccccccccc---ccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccc
Q 039819 333 LAKLLDHSDSH-----------VTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKG 398 (534)
Q Consensus 333 la~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~ 398 (534)
+++........ ......||+.|+|||++ .+..++.++|||||||++|||+||+.||......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---- 259 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL---- 259 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH----
Confidence 99876543211 11134589999999998 5667899999999999999999999999642211
Q ss_pred hHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 399 AMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
.... ..............+.+++.+|++.+|.+||++.|+++.|+..
T Consensus 260 ---~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 260 ---RIVN-------------GKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp ----------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred ---Hhhc-------------CcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0000 0000001111123578999999999999999999999998753
No 199
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.7e-39 Score=344.99 Aligned_cols=237 Identities=24% Similarity=0.361 Sum_probs=193.4
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
..++|...+.||+|+||.||+|+.. +++.||||++. +++..++||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3467999999999999999999985 78999999974 267888999999999999999999999
Q ss_pred eeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC---CCCcEEEEecccceecCC
Q 039819 263 YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD---DFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~---~~~~~kl~DFGla~~~~~ 339 (534)
|||+++|+|.+.+.....+++..+..|+.|++.||.|||+. +|+||||||+|||++ .++.+||+|||+++....
T Consensus 100 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 99999999999998778899999999999999999999999 999999999999995 567899999999987644
Q ss_pred CCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
.. ......||+.|+|||++.+ .++.++|||||||++|||++|+.||..... .+....+....... +.
T Consensus 177 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~~---~~ 243 (486)
T 3mwu_A 177 NT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-------YDILKRVETGKYAF---DL 243 (486)
T ss_dssp C------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCCS---CS
T ss_pred CC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCCC---CC
Confidence 32 2344579999999999865 689999999999999999999999974332 12222222111100 00
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
. .....+..+.+++.+|++.+|.+|||+.|+++
T Consensus 244 ~----~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 244 P----QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp G----GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred c----ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 00112357889999999999999999999986
No 200
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.5e-39 Score=325.30 Aligned_cols=236 Identities=22% Similarity=0.347 Sum_probs=195.5
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------hhhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
.++|...+.||+|+||.||+|+.. +++.||||.+. .++..++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 467888999999999999999985 78999999874 257788999999999999999999999999
Q ss_pred cCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe---CCCCcEEEEecccceecCCCCC
Q 039819 266 MSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 266 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl---~~~~~~kl~DFGla~~~~~~~~ 342 (534)
+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-- 162 (304)
T 2jam_A 88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-- 162 (304)
T ss_dssp CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB--
T ss_pred CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC--
Confidence 99999999998777899999999999999999999999 99999999999999 78899999999999765432
Q ss_pred ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccC
Q 039819 343 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELG 422 (534)
Q Consensus 343 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 422 (534)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+....+.... . . ...
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~-~-~-~~~--- 228 (304)
T 2jam_A 163 -IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-------SKLFEKIKEGY-Y-E-FES--- 228 (304)
T ss_dssp -TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHCC-C-C-CCT---
T ss_pred -ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCC-C-C-CCc---
Confidence 12334689999999999988999999999999999999999999974321 11112211111 0 0 011
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 423 SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 423 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
......+..+.+++.+|++.+|.+||++.|+++
T Consensus 229 -~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 229 -PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp -TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred -cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111123457899999999999999999999985
No 201
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8.7e-41 Score=329.70 Aligned_cols=239 Identities=28% Similarity=0.394 Sum_probs=191.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEe--CCCeeEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCA--TPTERLL 261 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~--~~~~~~l 261 (534)
.++|...+.||+|+||.||+|+.. +++.||+|.+. +.+..++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 367888999999999999999985 68999999874 1577889999999999885 4567899
Q ss_pred EeeccCCCChhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEeccCCCCcEEeCCCCcEEEEecc
Q 039819 262 VYPYMSNGSVASRLRE----KPALDWNTRKRIAIGAARGLLYLHEQCDPK-----IIHRDVKAANVLLDDFCEAIVGDFG 332 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~-----ivH~Dlkp~NiLl~~~~~~kl~DFG 332 (534)
||||+++|+|.+++.. ...+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999864 34599999999999999999999998 6 9999999999999999999999999
Q ss_pred cceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcc
Q 039819 333 LAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKK 412 (534)
Q Consensus 333 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
+++....... ......||..|+|||++.+..++.++||||||+++|||+||+.||..... .+....+....
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~i~~~~- 232 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-------KELAGKIREGK- 232 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTC-
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-------HHHHHHHhhcc-
Confidence 9987653321 22345689999999999888899999999999999999999999974321 11112221111
Q ss_pred cceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 413 VEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 413 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
. +.+ +...+..+.+++.+|++.+|.+||++.|+++.+..
T Consensus 233 ~-----~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 233 F-----RRI----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp C-----CCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred c-----ccC----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 1 011 11234578999999999999999999999986543
No 202
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.4e-39 Score=337.18 Aligned_cols=248 Identities=20% Similarity=0.241 Sum_probs=188.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-------------hhhhcc--------cCceeeEEEEEe----C
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-------------MISLAV--------HRNLLRLIGYCA----T 255 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-------------~l~~~~--------h~niv~l~~~~~----~ 255 (534)
++|...+.||+|+||.||+|+.. +++.||||++.. ++..++ |+||+++++++. .
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~ 116 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVN 116 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETT
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCC
Confidence 67888999999999999999874 688999998852 344443 888999999987 5
Q ss_pred CCeeEEEeeccCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC---------
Q 039819 256 PTERLLVYPYMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC--------- 324 (534)
Q Consensus 256 ~~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~--------- 324 (534)
....++||||+ +++|.+.+... ..+++..++.|+.||+.||.|||+++ +|+||||||+|||++.++
T Consensus 117 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 117 GTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp EEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhhh
Confidence 56789999999 55666666432 56999999999999999999999864 799999999999999775
Q ss_pred ----------------------------------------cEEEEecccceecCCCCCceeeccccccccccccccccCC
Q 039819 325 ----------------------------------------EAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQ 364 (534)
Q Consensus 325 ----------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 364 (534)
.+||+|||+++..... .....||..|+|||++.+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~ 269 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIGSG 269 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHTSC
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcCCC
Confidence 7999999999876532 23456899999999999989
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHH---HHHHHHhh--------hcccceecccc--c----------
Q 039819 365 SSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML---EWVKKIQQ--------EKKVEVLVDRE--L---------- 421 (534)
Q Consensus 365 ~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~---~~~~~~~~--------~~~~~~~~d~~--l---------- 421 (534)
++.++|||||||++|||+||+.||............. ........ .......+... +
T Consensus 270 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (397)
T 1wak_A 270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG 349 (397)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC
T ss_pred CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc
Confidence 9999999999999999999999997543222111111 11110000 00000000000 0
Q ss_pred -------CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 422 -------GSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 422 -------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
....+......+.+++.+||+.||++|||++|+++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 350 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01234566778999999999999999999999985
No 203
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.9e-40 Score=335.13 Aligned_cols=251 Identities=25% Similarity=0.343 Sum_probs=188.4
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCC--------
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATP-------- 256 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~-------- 256 (534)
++|...+.||+|+||.||+|+. .+++.||||++. +++..++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788899999999999999998 478999999773 267788999999999999763
Q ss_pred CeeEEEeeccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccce
Q 039819 257 TERLLVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK 335 (534)
Q Consensus 257 ~~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~ 335 (534)
...++||||+++ +|.+.+.. ...+++..++.|+.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 467999999986 66666654 46799999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCC---Cceeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhc
Q 039819 336 LLDHSD---SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEK 411 (534)
Q Consensus 336 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 411 (534)
...... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........+...........
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 764322 122344568999999998876 4579999999999999999999999975433221111111111000000
Q ss_pred c--c--ceeccc-cc--CCCCCH-H------HHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 412 K--V--EVLVDR-EL--GSNYDR-I------EVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 412 ~--~--~~~~d~-~l--~~~~~~-~------~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
. . ....+. .. ...... . ....+.+++.+|++.||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0 0 000000 00 000000 0 1246889999999999999999999985
No 204
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.2e-40 Score=333.78 Aligned_cols=241 Identities=29% Similarity=0.413 Sum_probs=190.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE------CCCcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL------GDGTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTER 259 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~ 259 (534)
.++|...+.||+|+||.||+|++ .++..||||.+.. ++..++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 36788899999999999999984 3567899998741 56778999999999999999999
Q ss_pred EEEeeccCCCChhhhcccC-------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC---CCcEEEE
Q 039819 260 LLVYPYMSNGSVASRLREK-------PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD---FCEAIVG 329 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~-------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~---~~~~kl~ 329 (534)
++||||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999754 3489999999999999999999999 9999999999999984 4569999
Q ss_pred ecccceecCCCCC-ceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHH
Q 039819 330 DFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKI 407 (534)
Q Consensus 330 DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 407 (534)
|||+++....... .......||..|+|||++.+..++.++|||||||++|||+| |+.||..... .+.....
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~~~~~~~ 258 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-------QEVLEFV 258 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------HHHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-------HHHHHHH
Confidence 9999986533221 12234557899999999988899999999999999999998 9999874321 1122222
Q ss_pred hhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 408 QQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 408 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
..... ...+...+..+.+++.+|++.+|.+||++.++++.|+..
T Consensus 259 ~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 259 TSGGR----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hcCCC----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 11111 011122345789999999999999999999999998753
No 205
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.5e-40 Score=330.98 Aligned_cols=246 Identities=23% Similarity=0.378 Sum_probs=193.8
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-----CCCcEEEEEEehh--------------hhhhcccCceeeEEEEEeCCC--eeE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-----GDGTVLAVKRLKD--------------MISLAVHRNLLRLIGYCATPT--ERL 260 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~--------------~l~~~~h~niv~l~~~~~~~~--~~~ 260 (534)
++|...+.||+|+||.||+|++ .+++.||||++.. .+..++||||+++++++.... ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 5677889999999999999984 3688999998752 577889999999999987654 679
Q ss_pred EEeeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 261 LVYPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
+||||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999999999764 4699999999999999999999998 999999999999999999999999999998754
Q ss_pred CCCce--eeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccc-------ccc-chHH-HHHHHHh
Q 039819 340 SDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSI-------NQK-GAML-EWVKKIQ 408 (534)
Q Consensus 340 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~-------~~~-~~~~-~~~~~~~ 408 (534)
..... .....++..|+|||.+.+..++.++|||||||++|||+||+.|+...... ... .... .......
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 43221 22345678899999998888999999999999999999999998632100 000 0000 1111111
Q ss_pred hhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 409 QEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 409 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
. ......+...+..+.+++.+||+.+|.+||++.||++.|+.
T Consensus 278 ~----------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~ 319 (326)
T 2w1i_A 278 N----------NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319 (326)
T ss_dssp T----------TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred c----------CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1 11111122334689999999999999999999999999875
No 206
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.1e-40 Score=337.18 Aligned_cols=251 Identities=20% Similarity=0.305 Sum_probs=187.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCC-----Cee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATP-----TER 259 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~-----~~~ 259 (534)
.++|...+.||+|+||.||+|+.. +++.||||++. +++..++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 367888999999999999999985 68999999874 267788999999999998754 678
Q ss_pred EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
++||||+. |+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 90 ~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 99999997 589888876 4699999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCc---------eeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh
Q 039819 340 SDSH---------VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ 409 (534)
Q Consensus 340 ~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCS
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCch
Confidence 2211 1223568999999998754 67899999999999999999999999754321111111100000000
Q ss_pred hcccceecc-------cccC--CCC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 410 EKKVEVLVD-------RELG--SNY-----DRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 410 ~~~~~~~~d-------~~l~--~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
......+.. ..+. ... ....+..+.+++.+|++.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000 0000 000 0112357889999999999999999999985
No 207
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.1e-39 Score=345.18 Aligned_cols=236 Identities=22% Similarity=0.334 Sum_probs=190.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
.+.|...+.||+|+||.||+|+.. ++..||||++. .++..+.|||||+++++|.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457888999999999999999986 68899999875 2678889999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC---CCcEEEEecccceecCCC
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD---FCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~---~~~~kl~DFGla~~~~~~ 340 (534)
||+++|+|.+.+.....+++..+..|+.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 116 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 116 ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 9999999999998878899999999999999999999999 9999999999999976 455999999999877543
Q ss_pred CCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccc
Q 039819 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRE 420 (534)
Q Consensus 341 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 420 (534)
. ......||+.|+|||++. +.++.++|||||||++|||++|+.||..... .+....+...... .+..
T Consensus 193 ~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~---~~~~ 259 (494)
T 3lij_A 193 K--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-------QEILRKVEKGKYT---FDSP 259 (494)
T ss_dssp B--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHTCCC---CCSG
T ss_pred c--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhCCCC---CCch
Confidence 2 234467999999999885 5789999999999999999999999975332 1222222221110 0111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 421 LGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 421 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
... ..+..+.+++.+|++.+|.+|||+.|+++
T Consensus 260 ~~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 260 EWK----NVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp GGT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcc----cCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 111 12347889999999999999999999985
No 208
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.2e-40 Score=334.67 Aligned_cols=236 Identities=22% Similarity=0.324 Sum_probs=189.0
Q ss_pred HhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
.++|...+.||+|+||.||+|+. .+++.||||++.. .+..+.||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 35788889999999999999997 4789999998852 256788999999999999999999999
Q ss_pred eccCCCChhhhcc----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 264 PYMSNGSVASRLR----EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 264 e~~~~gsL~~~l~----~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
||+++ +|.+++. ....+++..++.|+.|++.||.|||+++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99985 8888875 4568999999999999999999999743 899999999999999999999999999987643
Q ss_pred CCCceeeccccccccccccccc----cCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccce
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLS----TGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEV 415 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
. .......||+.|+|||++. ...++.++|||||||++|||+||+.||...... ...+........
T Consensus 207 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~------~~~~~~~~~~~~--- 275 (340)
T 3an0_A 207 S--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP------FQQLKQVVEEPS--- 275 (340)
T ss_dssp H--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH------HHHHHHHHHSCC---
T ss_pred c--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch------HHHHHHHhcCCC---
Confidence 2 1223356999999999964 346899999999999999999999999742211 111111111111
Q ss_pred ecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 416 LVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 416 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+.. .....+..+.+++.+|++.+|++||++.|+++
T Consensus 276 ---~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 ---PQL---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ---CCC---CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCC---CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 000 01112457899999999999999999999975
No 209
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.5e-39 Score=343.52 Aligned_cols=245 Identities=19% Similarity=0.260 Sum_probs=194.0
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh------------hhhhhccc-CceeeEEEEEeCCCeeEEEeeccC
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK------------DMISLAVH-RNLLRLIGYCATPTERLLVYPYMS 267 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~------------~~l~~~~h-~niv~l~~~~~~~~~~~lv~e~~~ 267 (534)
++|...+.||+|+||.||+|+. .+++.||||++. +++..+.| +++..+..++......++||||+
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~- 85 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL- 85 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-
Confidence 6788999999999999999997 578999999765 25666666 55666666777888889999999
Q ss_pred CCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe---CCCCcEEEEecccceecCCCCCc
Q 039819 268 NGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 268 ~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl---~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
+++|.+++.. ...+++..++.|+.||+.||.|||++ +||||||||+|||+ +.++.+||+|||+++........
T Consensus 86 g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 9999999974 56799999999999999999999999 99999999999999 68899999999999987543321
Q ss_pred ------eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceec
Q 039819 344 ------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLV 417 (534)
Q Consensus 344 ------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (534)
......||..|+|||++.+..++.++||||||||+|||++|+.||...........+..+..... ......
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-~~~~~~-- 239 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-ATSIEA-- 239 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH-HSCHHH--
T ss_pred cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc-cccHHH--
Confidence 12256799999999999999999999999999999999999999975433221111111111110 011000
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhc
Q 039819 418 DRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEG 460 (534)
Q Consensus 418 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~ 460 (534)
+...+ +.++.+++..|++.+|++||++.+|++.|+.
T Consensus 240 ---l~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~ 275 (483)
T 3sv0_A 240 ---LCRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRD 275 (483)
T ss_dssp ---HHTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred ---HhcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 00111 3478999999999999999999999998875
No 210
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.2e-39 Score=335.71 Aligned_cols=247 Identities=21% Similarity=0.275 Sum_probs=180.8
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCC------e
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPT------E 258 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~------~ 258 (534)
++|...+.||+|+||.||+|... +++.||||++. .+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 57888999999999999999875 68899999874 1567889999999999997665 6
Q ss_pred eEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecC
Q 039819 259 RLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 259 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
.++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred eEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 7999999975 7877775 3489999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHH--------HH------
Q 039819 339 HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE--------WV------ 404 (534)
Q Consensus 339 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~--------~~------ 404 (534)
... ......||+.|+|||++.+..++.++|||||||++|||+||+.||...........+.+ +.
T Consensus 179 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 256 (371)
T 2xrw_A 179 TSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 256 (371)
T ss_dssp -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHH
T ss_pred ccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence 321 23345789999999999988999999999999999999999999975432211110000 00
Q ss_pred -HHHhhh-ccc-----ceecccccCCC---CCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 405 -KKIQQE-KKV-----EVLVDRELGSN---YDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 405 -~~~~~~-~~~-----~~~~d~~l~~~---~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...... ... ...+....... ........+.+++.+|++.||.+|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000000 000 00000000000 01223568899999999999999999999986
No 211
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.8e-39 Score=346.26 Aligned_cols=236 Identities=24% Similarity=0.353 Sum_probs=195.2
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-----------------hhhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-----------------DMISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-----------------~~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
.++|...+.||+|+||.||+|+.. +++.||||++. .++..++||||+++++++.+....++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467888999999999999999986 78999999873 267788999999999999999999999
Q ss_pred eeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe---CCCCcEEEEecccceecCC
Q 039819 263 YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL---DDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl---~~~~~~kl~DFGla~~~~~ 339 (534)
|||+.+|+|.+.+.....+++..+..|+.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999999999998888899999999999999999999999 99999999999999 5678999999999987654
Q ss_pred CCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
.. ......||+.|+|||++.+ .++.++|||||||++|||++|+.||..... .+....+....... .
T Consensus 182 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~~---~- 247 (484)
T 3nyv_A 182 SK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE-------YDILKKVEKGKYTF---E- 247 (484)
T ss_dssp CC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCCC---C-
T ss_pred cc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHHcCCCCC---C-
Confidence 33 2344569999999999865 789999999999999999999999975332 11122222111000 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.......+..+.+++.+|++.+|.+|||+.|+++
T Consensus 248 ---~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 248 ---LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp ---SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 0000122457889999999999999999999985
No 212
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.8e-39 Score=331.17 Aligned_cols=245 Identities=20% Similarity=0.315 Sum_probs=183.8
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCee-----
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTER----- 259 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~----- 259 (534)
++|...+.||+|+||.||+|... +++.||||++.. ++..++||||+++++++......
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 57888899999999999999875 689999998852 57788999999999999877655
Q ss_pred -EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecC
Q 039819 260 -LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 260 -~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
++||||+. ++|.+.+.. .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 122 ~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEEcccc-ccHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999997 588887743 499999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhh--ccc--
Q 039819 339 HSDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQE--KKV-- 413 (534)
Q Consensus 339 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~-- 413 (534)
.. .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........+.......... ...
T Consensus 196 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 271 (371)
T 4exu_A 196 AE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 271 (371)
T ss_dssp --------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSC
T ss_pred cC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhh
Confidence 32 334568999999999877 678999999999999999999999997543221111111100000000 000
Q ss_pred ---cee---cccccCCCC---CHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 414 ---EVL---VDRELGSNY---DRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 414 ---~~~---~d~~l~~~~---~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
... +.......+ .......+.+++.+|++.+|++|||+.|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 272 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 000 000000000 0112457899999999999999999999985
No 213
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=319.80 Aligned_cols=234 Identities=21% Similarity=0.288 Sum_probs=186.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh------------------hhhhcccCceeeEEEEEe--CCCee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD------------------MISLAVHRNLLRLIGYCA--TPTER 259 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~------------------~l~~~~h~niv~l~~~~~--~~~~~ 259 (534)
.++|...+.||+|+||.||+|... +++.||||.+.. ++..++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 478999999999999999999975 688999998742 567788999999999984 44578
Q ss_pred EEEeeccCCCChhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceec
Q 039819 260 LLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~ 337 (534)
++||||++++ |.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999887 6666653 45699999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC-CceeeccccccccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccc
Q 039819 338 DHSD-SHVTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVE 414 (534)
Q Consensus 338 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (534)
.... ........||..|+|||++.+.. ++.++|||||||++|||++|+.||..... .+....+....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~i~~~~--- 229 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-------YKLFENIGKGS--- 229 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHCC---
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-------HHHHHHHhcCC---
Confidence 5322 22334556899999999987644 37899999999999999999999974321 12222221111
Q ss_pred eecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 415 VLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 415 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..+... ....+.+++.+|++.||.+||++.|+++
T Consensus 230 ----~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 230 ----YAIPGD----CGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp ----CCCCSS----SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----CCCCCc----cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 011112 2347889999999999999999999986
No 214
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.1e-39 Score=325.42 Aligned_cols=243 Identities=28% Similarity=0.420 Sum_probs=183.3
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
.++|...+.||+|+||.||+|... +++.||||++. ..+..++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 467888999999999999999864 68899999764 15667789999999999999999999999
Q ss_pred ccCCCChhhhccc--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEeccccee
Q 039819 265 YMSNGSVASRLRE--------KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336 (534)
Q Consensus 265 ~~~~gsL~~~l~~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~ 336 (534)
|+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999863 45699999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC----ceeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhc
Q 039819 337 LDHSDS----HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEK 411 (534)
Q Consensus 337 ~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 411 (534)
...... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... .. ........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~--~~~~~~~~ 244 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK----VL--MLTLQNDP 244 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG----HH--HHHHTSSC
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh----HH--HHHhccCC
Confidence 643221 12234568999999999865 568999999999999999999999997543211 11 11111100
Q ss_pred -cc-ceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 412 -KV-EVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 412 -~~-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.. ....+......+ +..+.+++.+|++.+|.+||++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 245 PSLETGVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCTTC-----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cccccccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00 111111122222 347889999999999999999999985
No 215
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.4e-39 Score=325.29 Aligned_cols=233 Identities=28% Similarity=0.420 Sum_probs=193.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
+.|...+.||+|+||.||+|+.. +++.||||.+. .++..+.||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 46888899999999999999874 68999999874 256778999999999999999999999999
Q ss_pred cCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCcee
Q 039819 266 MSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT 345 (534)
Q Consensus 266 ~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 345 (534)
+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....... ...
T Consensus 102 ~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 176 (303)
T 3a7i_A 102 LGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKR 176 (303)
T ss_dssp CTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-CCB
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc-ccc
Confidence 999999999875 4699999999999999999999999 99999999999999999999999999998765432 123
Q ss_pred eccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCC
Q 039819 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNY 425 (534)
Q Consensus 346 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 425 (534)
....||..|+|||++.+..++.++|||||||++|||+||+.||..... ........... .+.+...+
T Consensus 177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~------~~~~~~~~ 243 (303)
T 3a7i_A 177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP-------MKVLFLIPKNN------PPTLEGNY 243 (303)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSC------CCCCCSSC
T ss_pred CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH-------HHHHHHhhcCC------CCCCcccc
Confidence 345689999999999988999999999999999999999999964321 11111111111 11122222
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 426 DRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 426 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+..+.+++.+|++.+|.+|||+.|+++
T Consensus 244 ----~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 244 ----SKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp ----CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ----CHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 347899999999999999999999986
No 216
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=8.1e-39 Score=330.76 Aligned_cols=187 Identities=23% Similarity=0.307 Sum_probs=160.1
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-------------hhhhcc-cC-----ceeeEEEEEeCCCee
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-------------MISLAV-HR-----NLLRLIGYCATPTER 259 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-------------~l~~~~-h~-----niv~l~~~~~~~~~~ 259 (534)
..++|...+.||+|+||.||+|+.. +++.||||++.. ++..+. |+ +|+++++++......
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 3578899999999999999999975 678999999852 333333 44 599999999999999
Q ss_pred EEEeeccCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC--CCCcEEEEecccce
Q 039819 260 LLVYPYMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD--DFCEAIVGDFGLAK 335 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~--~~~~~kl~DFGla~ 335 (534)
++||||++ |+|.+++... ..+++..+..++.|++.||.|||+. ..+||||||||+|||++ .++.+||+|||+++
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 99999996 5999998754 4699999999999999999999952 22899999999999994 57889999999998
Q ss_pred ecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCc
Q 039819 336 LLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGK 392 (534)
Q Consensus 336 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~ 392 (534)
..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 210 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 77532 234568999999999999899999999999999999999999998544
No 217
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=323.28 Aligned_cols=240 Identities=24% Similarity=0.405 Sum_probs=188.4
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
.++|...+.||+|+||.||+|+... .||||.+. ..+..++||||+++++++.+....++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4678888999999999999999865 38888774 26778899999999999999999999999
Q ss_pred ccCCCChhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC--
Q 039819 265 YMSNGSVASRLREKP-ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-- 341 (534)
Q Consensus 265 ~~~~gsL~~~l~~~~-~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~-- 341 (534)
|+++++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+|||++ ++.+||+|||+++......
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred cccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 999999999998654 699999999999999999999999 999999999999998 6899999999987653211
Q ss_pred --Cceeecccccccccccccccc---------CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhh
Q 039819 342 --SHVTTAVRGTVGHIAPEYLST---------GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQE 410 (534)
Q Consensus 342 --~~~~~~~~gt~~y~aPE~~~~---------~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 410 (534)
........||..|+|||++.. ..++.++|||||||++|||+||+.||..... ..........
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~ 258 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA-------EAIIWQMGTG 258 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH-------HHHHHHHHTT
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHhccC
Confidence 112233458999999999864 4578899999999999999999999974321 1111111111
Q ss_pred cccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcCC
Q 039819 411 KKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGDG 462 (534)
Q Consensus 411 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~~ 462 (534)
. .+.... ...+..+.+++.+|++.+|.+|||+.+++++|+...
T Consensus 259 ~------~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 259 M------KPNLSQ---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp C------CCCCCC---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred C------CCCCCc---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 1 011110 012236889999999999999999999999998754
No 218
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.8e-40 Score=337.98 Aligned_cols=238 Identities=11% Similarity=0.040 Sum_probs=171.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhc--ccCceeeEE-------EEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLA--VHRNLLRLI-------GYCA 254 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~--~h~niv~l~-------~~~~ 254 (534)
.+|...+.||+|+||.||+|+.. +++.||||++.. .+..+ .||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 34777889999999999999975 789999998752 12333 599988755 4443
Q ss_pred CC-----------------CeeEEEeeccCCCChhhhccc-CCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCeEe
Q 039819 255 TP-----------------TERLLVYPYMSNGSVASRLRE-KPALDWNTR------KRIAIGAARGLLYLHEQCDPKIIH 310 (534)
Q Consensus 255 ~~-----------------~~~~lv~e~~~~gsL~~~l~~-~~~l~~~~~------~~i~~~i~~~l~yLH~~~~~~ivH 310 (534)
.+ ...++|||||+ |+|.+++.. ...+.+..+ ..++.|++.||+|||++ +|||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCcc
Confidence 32 33799999999 899999975 334566666 78889999999999999 9999
Q ss_pred ccCCCCcEEeCCCCcEEEEecccceecCCCCCceeecccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCc
Q 039819 311 RDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITGMRAL 388 (534)
Q Consensus 311 ~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~S~Gvvl~elltG~~p~ 388 (534)
|||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999976431 224457799999999977 67899999999999999999999999
Q ss_pred CCCccccccchHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 389 EFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
......... .| .....................+..+.+++.+||+.||++|||+.|+++
T Consensus 294 ~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKG----SW-----KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTT----CC-----CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCccccc----ch-----hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 754221100 00 000000000011111111123458899999999999999999999975
No 219
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=7e-39 Score=321.72 Aligned_cols=238 Identities=24% Similarity=0.360 Sum_probs=190.3
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh------------hhhhhcccCceeeEEEEEeCCCeeEEEeecc
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK------------DMISLAVHRNLLRLIGYCATPTERLLVYPYM 266 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~ 266 (534)
..++|...+.||+|+||.||+|... +++.||||.+. .++..+.||||+++++++......++||||+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 3467888999999999999999986 58999999875 2677889999999999999999999999999
Q ss_pred CCCChhhhcc-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCcee
Q 039819 267 SNGSVASRLR-EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT 345 (534)
Q Consensus 267 ~~gsL~~~l~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~ 345 (534)
++|+|.+++. ....+++..+..++.+++.||.|||+. +|+||||||+||+++.++.+||+|||++........ ..
T Consensus 107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~ 182 (314)
T 3com_A 107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-KR 182 (314)
T ss_dssp TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-CB
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-cc
Confidence 9999999987 456799999999999999999999999 999999999999999999999999999987654321 23
Q ss_pred eccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCC
Q 039819 346 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNY 425 (534)
Q Consensus 346 ~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 425 (534)
....||..|+|||++.+..++.++|||||||++|||++|+.||...... .......... .... ..
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~-~~~~-------~~ 247 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-------RAIFMIPTNP-PPTF-------RK 247 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------HHHHHHHHSC-CCCC-------SS
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHhcCC-Cccc-------CC
Confidence 3456899999999999888999999999999999999999999743211 1111111111 0000 01
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 426 DRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 426 ~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+...+..+.+++.+|++.+|.+|||+.++++
T Consensus 248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1122457899999999999999999999985
No 220
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.1e-39 Score=323.50 Aligned_cols=237 Identities=23% Similarity=0.312 Sum_probs=188.0
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------hhhhhcccCceeeEEEEEeCCCeeEEEeec
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
.++|+..+.||+|+||.||+|+.. ++..||+|.+. +++..++||||+++++++......++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467888999999999999999986 58999999874 257788999999999999999999999999
Q ss_pred cCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCce
Q 039819 266 MSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV 344 (534)
Q Consensus 266 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~ 344 (534)
+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 173 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQK 173 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc-ccc
Confidence 999999998864 56799999999999999999999999 9999999999999999999999999997643211 011
Q ss_pred eecccccccccccccc-----ccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 345 TTAVRGTVGHIAPEYL-----STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 345 ~~~~~gt~~y~aPE~~-----~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
.....||..|+|||++ ....++.++|||||||++|||+||+.||..... .............. .
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~-~--- 242 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-------MRVLLKIAKSDPPT-L--- 242 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-------HHHHHHHHHSCCCC-C---
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-------HHHHHHHhccCCcc-c---
Confidence 2234689999999998 356789999999999999999999999974321 11111111111100 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..+...+..+.+++.+|++.+|.+|||+.++++
T Consensus 243 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 ----LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ----SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ----CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 011122357889999999999999999999874
No 221
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.1e-39 Score=326.97 Aligned_cols=247 Identities=20% Similarity=0.293 Sum_probs=190.3
Q ss_pred hCCCcCCeeccCCcEEEEEEEE--CCCcEEEEEEehh-------------hhhhcccC------ceeeEEEEEeCCCeeE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL--GDGTVLAVKRLKD-------------MISLAVHR------NLLRLIGYCATPTERL 260 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~-------------~l~~~~h~------niv~l~~~~~~~~~~~ 260 (534)
++|...+.||+|+||.||+|.. .+++.||||++.. ++..+.|+ +++++++++...+..+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC 93 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence 5788899999999999999987 3688999998852 45555555 4999999999999999
Q ss_pred EEeeccCCCChhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC----------------
Q 039819 261 LVYPYMSNGSVASRLREKP--ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD---------------- 322 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~~~--~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~---------------- 322 (534)
+||||+ +++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 94 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccccc
Confidence 999999 889999997654 689999999999999999999999 9999999999999987
Q ss_pred ---CCcEEEEecccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccch
Q 039819 323 ---FCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGA 399 (534)
Q Consensus 323 ---~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~ 399 (534)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...........
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 245 (339)
T 1z57_A 170 TLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245 (339)
T ss_dssp EESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH
T ss_pred cccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 678999999999875432 2345689999999999988999999999999999999999999975433211111
Q ss_pred HHHHHHHHh----hhcc-cceecccc-------------------c--CCCCCHHHHHHHHHHHHHhcccCCCCCCChHH
Q 039819 400 MLEWVKKIQ----QEKK-VEVLVDRE-------------------L--GSNYDRIEVGEILQVALLCTQYLPVHRPKMSE 453 (534)
Q Consensus 400 ~~~~~~~~~----~~~~-~~~~~d~~-------------------l--~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~e 453 (534)
+........ .... ........ + ...........+.+++.+|++.||.+|||+.|
T Consensus 246 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e 325 (339)
T 1z57_A 246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE 325 (339)
T ss_dssp HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence 111000000 0000 00000000 0 01112344678999999999999999999999
Q ss_pred HHH
Q 039819 454 VVR 456 (534)
Q Consensus 454 v~~ 456 (534)
+++
T Consensus 326 ll~ 328 (339)
T 1z57_A 326 ALK 328 (339)
T ss_dssp HTT
T ss_pred Hhc
Confidence 874
No 222
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.4e-39 Score=330.73 Aligned_cols=240 Identities=20% Similarity=0.269 Sum_probs=169.3
Q ss_pred HhCCCcC-CeeccCCcEEEEEEEEC-CCcEEEEEEehh----------hhhhcccCceeeEEEEEeC----CCeeEEEee
Q 039819 201 TENFSSK-NILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------MISLAVHRNLLRLIGYCAT----PTERLLVYP 264 (534)
Q Consensus 201 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------~l~~~~h~niv~l~~~~~~----~~~~~lv~e 264 (534)
.++|... ++||+|+||.||+|+.. +++.||||++.. .+....||||+++++++.. ....++|||
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 106 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME 106 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence 4677774 47999999999999986 689999998852 4567789999999999876 445799999
Q ss_pred ccCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC---CCcEEEEecccceecCC
Q 039819 265 YMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD---FCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 265 ~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~---~~~~kl~DFGla~~~~~ 339 (534)
|+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 107 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp CCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 99999999999764 3699999999999999999999999 9999999999999976 45699999999987643
Q ss_pred CCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
. ......||+.|+|||++.+..++.++|||||||++|||+||+.||............. ..... .. .
T Consensus 184 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~~-~~------~ 250 (336)
T 3fhr_A 184 N---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK---RRIRL-GQ------Y 250 (336)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------------
T ss_pred c---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH---Hhhhc-cc------c
Confidence 2 2234568999999999988889999999999999999999999996433211100000 00000 00 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..........+..+.+++.+|++.+|.+|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 251 GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000011123457899999999999999999999986
No 223
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=5.6e-39 Score=323.94 Aligned_cols=238 Identities=22% Similarity=0.304 Sum_probs=191.0
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------------hhhhhcccCceeeEEEEEeCC
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------------DMISLAVHRNLLRLIGYCATP 256 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------------~~l~~~~h~niv~l~~~~~~~ 256 (534)
..++|...+.||+|+||.||+|+.. +++.||||.+. +++..++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3567999999999999999999975 57899999763 257788999999999999766
Q ss_pred CeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCc---EEEEeccc
Q 039819 257 TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCE---AIVGDFGL 333 (534)
Q Consensus 257 ~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~---~kl~DFGl 333 (534)
. .++||||+++|+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred c-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 5 899999999999999998888899999999999999999999999 9999999999999987654 99999999
Q ss_pred ceecCCCCCceeeccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhh
Q 039819 334 AKLLDHSDSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQE 410 (534)
Q Consensus 334 a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 410 (534)
++..... .......||+.|+|||++. ...++.++|||||||++|||+||+.||....... .+...+. .
T Consensus 164 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~---~- 234 (322)
T 2ycf_A 164 SKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV---SLKDQIT---S- 234 (322)
T ss_dssp CEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS---CHHHHHH---H-
T ss_pred ceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH---HHHHHHH---h-
Confidence 9876532 2223456899999999873 5678999999999999999999999997433211 1111111 1
Q ss_pred cccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 411 KKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 411 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.... ..+.... ..+..+.+++.+|++.+|.+||++.++++
T Consensus 235 ~~~~--~~~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 235 GKYN--FIPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp TCCC--CCHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred Cccc--cCchhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1000 0000001 12357899999999999999999999986
No 224
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=335.62 Aligned_cols=186 Identities=24% Similarity=0.363 Sum_probs=144.9
Q ss_pred hCCCc-CCeeccCCcEEEEEEEEC---CCcEEEEEEeh------------hhhhhcccCceeeEEEEEe--CCCeeEEEe
Q 039819 202 ENFSS-KNILGAGGFGNVYKGKLG---DGTVLAVKRLK------------DMISLAVHRNLLRLIGYCA--TPTERLLVY 263 (534)
Q Consensus 202 ~~~~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~------------~~l~~~~h~niv~l~~~~~--~~~~~~lv~ 263 (534)
+.|.. .++||+|+||.||+|+.. ++..||||++. .++..++|||||++++++. .....++||
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 44554 458999999999999975 57889999875 2678889999999999995 467889999
Q ss_pred eccCCCChhhhccc---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe----CCCCcEEEEe
Q 039819 264 PYMSNGSVASRLRE---------KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL----DDFCEAIVGD 330 (534)
Q Consensus 264 e~~~~gsL~~~l~~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl----~~~~~~kl~D 330 (534)
||+.+ +|.+++.. ...+++..++.|+.||+.||.|||+. +|+||||||+|||+ +.++.+||+|
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 99974 78777742 12499999999999999999999999 99999999999999 7789999999
Q ss_pred cccceecCCCCC--ceeeccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCcCCC
Q 039819 331 FGLAKLLDHSDS--HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGMRALEFG 391 (534)
Q Consensus 331 FGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvvl~elltG~~p~~~~ 391 (534)
||+++....... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||...
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 999987653211 223446799999999998774 5899999999999999999999999754
No 225
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=9.5e-39 Score=342.28 Aligned_cols=236 Identities=24% Similarity=0.335 Sum_probs=191.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------------------hhhhhcccCceeeEEEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------------------DMISLAVHRNLLRLIGY 252 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------------------~~l~~~~h~niv~l~~~ 252 (534)
.++|...+.||+|+||.||+|+.. ++..||||++. .++..++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467889999999999999999985 57899999864 15677889999999999
Q ss_pred EeCCCeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC---cEEEE
Q 039819 253 CATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC---EAIVG 329 (534)
Q Consensus 253 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~---~~kl~ 329 (534)
|.+....++|||||++|+|.+.+.....+++..+..|+.|++.||.|||+. +|+||||||+|||++.++ .+||+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEE
Confidence 999999999999999999999998878899999999999999999999999 999999999999998775 69999
Q ss_pred ecccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh
Q 039819 330 DFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ 409 (534)
Q Consensus 330 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
|||+++...... ......||+.|+|||++. +.++.++|||||||++|||++|+.||..... .+....+..
T Consensus 192 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~ 261 (504)
T 3q5i_A 192 DFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND-------QDIIKKVEK 261 (504)
T ss_dssp CCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH
T ss_pred ECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHc
Confidence 999998775432 234456999999999986 5689999999999999999999999975332 122222221
Q ss_pred hcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 410 EKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 410 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.... .+..... ..+..+.+++.+|++.+|.+|||+.|+++
T Consensus 262 ~~~~---~~~~~~~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 262 GKYY---FDFNDWK----NISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CCCC---CCHHHHT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCC---CCccccC----CCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1100 0000001 12357899999999999999999999985
No 226
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=321.69 Aligned_cols=235 Identities=24% Similarity=0.348 Sum_probs=186.8
Q ss_pred CCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEeh--------------hhhhhcccCceeeEEEEEeCCCeeEEEeeccC
Q 039819 203 NFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCATPTERLLVYPYMS 267 (534)
Q Consensus 203 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~~~~~~~lv~e~~~ 267 (534)
+|....+||+|+||.||+|+. .+++.||||.+. .++..++||||+++++++......++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 455566899999999999997 468899999864 26778899999999999999999999999999
Q ss_pred CCChhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC-CCcEEEEecccceecCCCCCc
Q 039819 268 NGSVASRLREK---PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD-FCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 268 ~gsL~~~l~~~---~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~-~~~~kl~DFGla~~~~~~~~~ 343 (534)
+++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~- 178 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP- 178 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-
Confidence 99999999754 3567899999999999999999999 9999999999999987 89999999999987654221
Q ss_pred eeeccccccccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccccc
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDREL 421 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~--~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 421 (534)
......||..|+|||++.+.. ++.++|||||||++|||+||+.||...... .......... . ..+.+
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~-~-----~~~~~ 247 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP-----QAAMFKVGMF-K-----VHPEI 247 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH-----HHHHHHHHHH-C-----CCCCC
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch-----hHHHHhhccc-c-----ccccc
Confidence 233456899999999987644 789999999999999999999999632211 0011110000 0 01112
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 422 GSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 422 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+...+..+.+++.+|++.+|++||++.|+++
T Consensus 248 ----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 248 ----PESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2223457889999999999999999999985
No 227
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=331.79 Aligned_cols=245 Identities=25% Similarity=0.377 Sum_probs=186.9
Q ss_pred cCHHHHHHHHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-------------hhhhhc-ccCceeeEEEEEeC-
Q 039819 192 FTFRELQQATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-------------DMISLA-VHRNLLRLIGYCAT- 255 (534)
Q Consensus 192 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-------------~~l~~~-~h~niv~l~~~~~~- 255 (534)
+++.++....++|...+.||+|+||.||+|+.. +++.||||++. ..+..+ .||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 344444455688999999999999999999984 78999999874 145555 79999999999976
Q ss_pred -----CCeeEEEeeccCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEE
Q 039819 256 -----PTERLLVYPYMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIV 328 (534)
Q Consensus 256 -----~~~~~lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl 328 (534)
....++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEE
Confidence 45789999999999999999753 5799999999999999999999999 9999999999999999999999
Q ss_pred EecccceecCCCCCceeeccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHH
Q 039819 329 GDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW 403 (534)
Q Consensus 329 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~ 403 (534)
+|||++........ ......||..|+|||++. +..++.++|||||||++|||+||+.||...... ..
T Consensus 171 ~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~ 242 (326)
T 2x7f_A 171 VDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------RA 242 (326)
T ss_dssp CCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-------HH
T ss_pred eeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-------HH
Confidence 99999987643221 223456899999999986 566899999999999999999999999643211 11
Q ss_pred HHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 404 VKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 404 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
........ . +... ....+..+.+++.+|++.+|.+||++.++++
T Consensus 243 ~~~~~~~~-~-----~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 243 LFLIPRNP-A-----PRLK---SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHHHSC-C-----CCCS---CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHhhcCc-c-----ccCC---ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 11111111 0 0110 1112347889999999999999999999986
No 228
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=7e-40 Score=325.07 Aligned_cols=240 Identities=31% Similarity=0.419 Sum_probs=186.3
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC--CCc--EEEEEEeh-----------------hhhhhcccCceeeEEEEEeCCCeeE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG--DGT--VLAVKRLK-----------------DMISLAVHRNLLRLIGYCATPTERL 260 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~-----------------~~l~~~~h~niv~l~~~~~~~~~~~ 260 (534)
++|...+.||+|+||.||+|++. ++. .||||++. +.+..++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 56888899999999999999863 333 68999774 1567788999999999998765 88
Q ss_pred EEeeccCCCChhhhccc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 261 LVYPYMSNGSVASRLRE-KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 99999999999999975 35699999999999999999999999 999999999999999999999999999988754
Q ss_pred CCCce--eeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhccccee
Q 039819 340 SDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVL 416 (534)
Q Consensus 340 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (534)
..... .....+|..|+|||++.+..++.++||||||+++|||++ |+.||..... .+...........
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-------~~~~~~~~~~~~~--- 243 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-------SQILHKIDKEGER--- 243 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTSCCC---
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-------HHHHHHHHccCCC---
Confidence 33221 223457889999999988889999999999999999999 9999974321 1222222111110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 417 VDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 417 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
...+...+..+.+++.+|++.+|.+||++.++++.|+..
T Consensus 244 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 282 (291)
T 1u46_A 244 ------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282 (291)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence 011122345789999999999999999999999998763
No 229
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=328.76 Aligned_cols=244 Identities=19% Similarity=0.314 Sum_probs=184.2
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCe------
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTE------ 258 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~------ 258 (534)
++|...+.||+|+||.||+|+.. +|+.||||++. .++..++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 56888899999999999999975 68999999874 15677889999999999987654
Q ss_pred eEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecC
Q 039819 259 RLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 259 ~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
.++||||+. |+|.+++.. .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 588888754 499999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHH--------HHHhh
Q 039819 339 HSDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWV--------KKIQQ 409 (534)
Q Consensus 339 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~--------~~~~~ 409 (534)
.. .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||...........+.... .....
T Consensus 178 ~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 253 (353)
T 3coi_A 178 AE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 253 (353)
T ss_dssp ----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSC
T ss_pred CC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhh
Confidence 32 234568999999999876 678999999999999999999999997543221111111100 00000
Q ss_pred h------cccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 410 E------KKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 410 ~------~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
. ........+.+. .........+.+++.+|++.||.+|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 254 KAAKSYIQSLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHHHHTSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHhCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 000000000000 111223458899999999999999999999985
No 230
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.8e-39 Score=319.20 Aligned_cols=237 Identities=25% Similarity=0.324 Sum_probs=193.2
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh-----------------------hhhhhcc-cCceeeEEEEEeC
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK-----------------------DMISLAV-HRNLLRLIGYCAT 255 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~-----------------------~~l~~~~-h~niv~l~~~~~~ 255 (534)
.++|...+.||+|+||.||+|+.. +++.||||.+. +++..+. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467888999999999999999985 68999999873 1455564 9999999999999
Q ss_pred CCeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccce
Q 039819 256 PTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK 335 (534)
Q Consensus 256 ~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~ 335 (534)
....++||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchh
Confidence 999999999999999999998878899999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCceeeccccccccccccccc------cCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh
Q 039819 336 LLDHSDSHVTTAVRGTVGHIAPEYLS------TGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ 409 (534)
Q Consensus 336 ~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
...... ......||..|+|||++. ...++.++||||||+++|||++|+.||..... .........
T Consensus 173 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~ 243 (298)
T 1phk_A 173 QLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-------MLMLRMIMS 243 (298)
T ss_dssp ECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHH
T ss_pred hcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-------HHHHHHHhc
Confidence 765432 233456899999999884 45678999999999999999999999964321 111111111
Q ss_pred hcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 410 EKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 410 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
... . .........+..+.+++.+|++.+|.+||++.|+++
T Consensus 244 ~~~-~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 GNY-Q------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TCC-C------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCc-c------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 110 0 000011123457899999999999999999999975
No 231
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=9e-39 Score=325.63 Aligned_cols=242 Identities=21% Similarity=0.333 Sum_probs=193.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh-------------------------------hhhhhcccCceeeE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK-------------------------------DMISLAVHRNLLRL 249 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~-------------------------------~~l~~~~h~niv~l 249 (534)
.++|...+.||+|+||.||+|+. +++.||||++. .++..++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36788899999999999999999 99999999863 14667789999999
Q ss_pred EEEEeCCCeeEEEeeccCCCChhhh------ccc--CCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEeccCCCCcEEe
Q 039819 250 IGYCATPTERLLVYPYMSNGSVASR------LRE--KPALDWNTRKRIAIGAARGLLYLHE-QCDPKIIHRDVKAANVLL 320 (534)
Q Consensus 250 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~--~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlkp~NiLl 320 (534)
++++.+.+..++||||+++|+|.++ +.. ...+++..++.++.|++.||.|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999998 665 5679999999999999999999998 7 99999999999999
Q ss_pred CCCCcEEEEecccceecCCCCCceeeccccccccccccccccC-CCCc-chhHHHHHHHHHHHHhCCCCcCCCccccccc
Q 039819 321 DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG-QSSE-KTDVFGFGILLLELITGMRALEFGKSINQKG 398 (534)
Q Consensus 321 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~ 398 (534)
+.++.+||+|||++...... ......||..|+|||++.+. .++. ++|||||||++|||+||+.||......
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 99999999999999876443 34456799999999999877 5666 999999999999999999999754321
Q ss_pred hHHHHHHHHhhhccccee------cccccC---CCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 399 AMLEWVKKIQQEKKVEVL------VDRELG---SNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~------~d~~l~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.+....+.... .... ..+... .......+..+.+++.+|++.+|.+||++.|+++
T Consensus 259 --~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 259 --VELFNNIRTKN-IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp --HHHHHHHTSCC-CCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --HHHHHHHhccC-cCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11222221111 0000 000000 0001223458899999999999999999999986
No 232
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=323.89 Aligned_cols=229 Identities=24% Similarity=0.364 Sum_probs=183.3
Q ss_pred HHHHhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh--------------------hhhhc----ccCceeeEEEE
Q 039819 198 QQATENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD--------------------MISLA----VHRNLLRLIGY 252 (534)
Q Consensus 198 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~--------------------~l~~~----~h~niv~l~~~ 252 (534)
....++|...+.||+|+||.||+|+. .+++.||||++.. .+..+ +|+||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34467899999999999999999987 4688999998731 34444 79999999999
Q ss_pred EeCCCeeEEEeec-cCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC-CCCcEEEEe
Q 039819 253 CATPTERLLVYPY-MSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD-DFCEAIVGD 330 (534)
Q Consensus 253 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~-~~~~~kl~D 330 (534)
+...+..++|||| +.+++|.+++.....+++..++.++.|++.||.|||+. +|+||||||+||+++ .++.+||+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEE
Confidence 9999999999999 78999999998877899999999999999999999999 999999999999999 889999999
Q ss_pred cccceecCCCCCceeeccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhh
Q 039819 331 FGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQ 409 (534)
Q Consensus 331 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 409 (534)
||+++...... .....||..|+|||++.+..+ +.++|||||||++|||++|+.||.... +.. .
T Consensus 184 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------~~~----~ 247 (312)
T 2iwi_A 184 FGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---------EIL----E 247 (312)
T ss_dssp CSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------HHH----H
T ss_pred cchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH---------HHh----h
Confidence 99998775432 334568999999999877666 458999999999999999999996321 000 0
Q ss_pred hcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 410 EKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 410 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.. .. .+......+.+++.+|++.+|++||++.|+++
T Consensus 248 -~~------~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 248 -AE------LH----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -TC------CC----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -hc------cC----CcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 01 11122347889999999999999999999986
No 233
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.8e-39 Score=326.08 Aligned_cols=236 Identities=22% Similarity=0.313 Sum_probs=184.8
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEeh----------------hhhhhcc--cCceeeEEEEEeCCCeeEEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------DMISLAV--HRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~----------------~~l~~~~--h~niv~l~~~~~~~~~~~lv 262 (534)
.++|...+.||+|+||.||+|+..+++.||||.+. +.+..+. |+||+++++++......++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 46788889999999999999999889999999874 1455665 59999999999999999999
Q ss_pred eeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC
Q 039819 263 YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 342 (534)
|| +.+++|.+++.....+++..++.++.|++.||.|||+. +|+||||||+|||+++ +.+||+|||+++.......
T Consensus 107 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~ 181 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT 181 (313)
T ss_dssp EC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC------
T ss_pred Ee-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCccc
Confidence 99 56889999998888899999999999999999999999 9999999999999975 8999999999987643322
Q ss_pred -ceeecccccccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhh
Q 039819 343 -HVTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQE 410 (534)
Q Consensus 343 -~~~~~~~gt~~y~aPE~~~~-----------~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 410 (534)
.......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... .........
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~~~~-- 253 (313)
T 3cek_A 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHAII-- 253 (313)
T ss_dssp --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHHH--
T ss_pred cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH------HHHHHHHHH--
Confidence 12234568999999999865 4688899999999999999999999964321 111111111
Q ss_pred cccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 411 KKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 411 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
++.....++......+.+++.+|++.+|.+||++.|+++
T Consensus 254 -------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 254 -------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp -------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------hcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111111122457889999999999999999999985
No 234
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.1e-38 Score=327.97 Aligned_cols=248 Identities=21% Similarity=0.276 Sum_probs=186.3
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh-------------hhhhcc-----------cCceeeEEEEEeCC
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD-------------MISLAV-----------HRNLLRLIGYCATP 256 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~-------------~l~~~~-----------h~niv~l~~~~~~~ 256 (534)
++|...+.||+|+||.||+|+. .+++.||||++.. ++..+. |+||+++++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 5788889999999999999997 4789999998851 333333 89999999999764
Q ss_pred C----eeEEEeeccCCCChhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC------CCC
Q 039819 257 T----ERLLVYPYMSNGSVASRLRE--KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD------DFC 324 (534)
Q Consensus 257 ~----~~~lv~e~~~~gsL~~~l~~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~------~~~ 324 (534)
. ..++||||+ +++|.+++.. ...+++..+..|+.||+.||.|||+++ +|+||||||+|||++ ..+
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEE
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcc
Confidence 4 679999999 8899999875 345999999999999999999999853 799999999999994 455
Q ss_pred cEEEEecccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccc---hHH
Q 039819 325 EAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKG---AML 401 (534)
Q Consensus 325 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~---~~~ 401 (534)
.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... .+.
T Consensus 176 ~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 251 (373)
T 1q8y_A 176 QIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251 (373)
T ss_dssp EEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred eEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence 8999999999876532 233468999999999999899999999999999999999999997543211111 111
Q ss_pred HHHHHHhhh------------------cccceeccc---------ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHH
Q 039819 402 EWVKKIQQE------------------KKVEVLVDR---------ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEV 454 (534)
Q Consensus 402 ~~~~~~~~~------------------~~~~~~~d~---------~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev 454 (534)
......... .....+... .-...++......+.+++.+|++.||.+|||++|+
T Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 331 (373)
T 1q8y_A 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 331 (373)
T ss_dssp HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHH
Confidence 111110000 000000000 00112445667889999999999999999999999
Q ss_pred HH
Q 039819 455 VR 456 (534)
Q Consensus 455 ~~ 456 (534)
++
T Consensus 332 l~ 333 (373)
T 1q8y_A 332 VN 333 (373)
T ss_dssp HT
T ss_pred hh
Confidence 85
No 235
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.1e-39 Score=326.43 Aligned_cols=238 Identities=25% Similarity=0.333 Sum_probs=169.6
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCeeEEEee
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTERLLVYP 264 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~~lv~e 264 (534)
++|...+.||+|+||.||+|... +++.||||++.. ++..+.||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 57888899999999999999985 689999998852 4566789999999999999999999999
Q ss_pred ccCCCChhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 265 YMSNGSVASRLRE-----KPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 265 ~~~~gsL~~~l~~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
|+++ +|.+++.. ...+++..+..++.|++.||.|||+.. +|+||||||+|||++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9985 77777652 567999999999999999999999853 799999999999999999999999999987643
Q ss_pred CCCceeecccccccccccccc----ccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccce
Q 039819 340 SDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEV 415 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (534)
.. ......||..|+|||++ .+..++.++|||||||++|||+||+.||....... +... ....
T Consensus 179 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~------~~~~ 244 (327)
T 3aln_A 179 SI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF------DQLT------QVVK 244 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------C------CCCC
T ss_pred cc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH------HHHH------HHhc
Confidence 32 22334689999999998 45678999999999999999999999997422110 0000 0000
Q ss_pred ecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 416 LVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 416 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...+.+...........+.+++.+|++.+|.+||++.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 00111111111123457899999999999999999999975
No 236
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.4e-39 Score=356.53 Aligned_cols=240 Identities=23% Similarity=0.372 Sum_probs=191.5
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECC----CcEEEEEEehh---------------hhhhcccCceeeEEEEEeCCCeeEE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGD----GTVLAVKRLKD---------------MISLAVHRNLLRLIGYCATPTERLL 261 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~---------------~l~~~~h~niv~l~~~~~~~~~~~l 261 (534)
.++|...+.||+|+||.||+|.+.. +..||||++.. ++..++||||+++++++. .+..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 4678888999999999999998742 46799998752 567789999999999985 456899
Q ss_pred EeeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCC
Q 039819 262 VYPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 262 v~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~ 340 (534)
||||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999999999754 4699999999999999999999999 9999999999999999999999999999877544
Q ss_pred CCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 341 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
.........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... +....+......
T Consensus 545 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-------~~~~~i~~~~~~------ 611 (656)
T 2j0j_A 545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-------DVIGRIENGERL------ 611 (656)
T ss_dssp ---------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHHHHHHTCCC------
T ss_pred cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-------HHHHHHHcCCCC------
Confidence 3333334457889999999988899999999999999999997 99999743221 112222111110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
..+...+..+.+++.+||+.+|.+||++.++++.|+..
T Consensus 612 ----~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 612 ----PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11122345889999999999999999999999998763
No 237
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.7e-38 Score=316.43 Aligned_cols=238 Identities=25% Similarity=0.410 Sum_probs=183.3
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-------------hhhhcccCceeeEEEEEeC----------
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-------------MISLAVHRNLLRLIGYCAT---------- 255 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-------------~l~~~~h~niv~l~~~~~~---------- 255 (534)
..++|...+.||+|+||.||+|+.. +++.||||++.. ++..++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 4567899999999999999999974 789999998752 5778899999999998865
Q ss_pred ---CCeeEEEeeccCCCChhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEec
Q 039819 256 ---PTERLLVYPYMSNGSVASRLREK-PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDF 331 (534)
Q Consensus 256 ---~~~~~lv~e~~~~gsL~~~l~~~-~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DF 331 (534)
....++||||+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeC
Confidence 34678999999999999999743 4688999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCC-------------CceeeccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCcCCCcccccc
Q 039819 332 GLAKLLDHSD-------------SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGMRALEFGKSINQK 397 (534)
Q Consensus 332 Gla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~ 397 (534)
|+++...... ........||..|+|||++.+. .++.++|||||||++|||++ ||....
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~----- 232 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM----- 232 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-----
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-----
Confidence 9998764321 1122345689999999998754 68999999999999999998 443211
Q ss_pred chHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 398 GAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
............ ............+..+.+++.+|++.||.+|||+.++++
T Consensus 233 -~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 -ERVNILKKLRSV-------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp -HHHHHHHHHHST-------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -hHHHHHHhcccc-------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111222221111 111122233334457889999999999999999999986
No 238
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.4e-38 Score=321.01 Aligned_cols=227 Identities=23% Similarity=0.398 Sum_probs=189.6
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh--------------------hhhhcc--cCceeeEEEEEeCC
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD--------------------MISLAV--HRNLLRLIGYCATP 256 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~--------------------~l~~~~--h~niv~l~~~~~~~ 256 (534)
..++|...+.||+|+||.||+|+. .+++.||||++.. ++..+. |+||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 346788899999999999999986 4689999998742 445554 69999999999999
Q ss_pred CeeEEEeeccCC-CChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC-CCCcEEEEecccc
Q 039819 257 TERLLVYPYMSN-GSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDFGLA 334 (534)
Q Consensus 257 ~~~~lv~e~~~~-gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~-~~~~~kl~DFGla 334 (534)
+..++||||+.+ ++|.+++.....+++..++.++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999986 89999998888899999999999999999999999 999999999999999 7899999999999
Q ss_pred eecCCCCCceeeccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhccc
Q 039819 335 KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKV 413 (534)
Q Consensus 335 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (534)
+..... ......||+.|+|||++.+..+ +.++|||||||++|||+||+.||..... . .. ...
T Consensus 198 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---------~----~~-~~~ 260 (320)
T 3a99_A 198 ALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------I----IR-GQV 260 (320)
T ss_dssp EECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH---------H----HH-CCC
T ss_pred cccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh---------h----hc-ccc
Confidence 877543 2334569999999999877665 6889999999999999999999963210 0 00 000
Q ss_pred ceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 414 EVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 414 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..... .+..+.+++.+|++.+|.+||++.|+++
T Consensus 261 ------~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 261 ------FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ------CCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------ccccc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111 2347889999999999999999999986
No 239
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.5e-38 Score=311.95 Aligned_cols=237 Identities=23% Similarity=0.366 Sum_probs=192.4
Q ss_pred HHhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh----------------hhhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 200 ATENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK----------------DMISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 200 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----------------~~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
..++|...+.||+|+||.||+|+.. +++.||||++. +.+..++||||+++++++......++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4578999999999999999999986 68999999874 256788999999999999999999999
Q ss_pred eeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCC---CcEEEEecccceecCC
Q 039819 263 YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDF---CEAIVGDFGLAKLLDH 339 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~---~~~kl~DFGla~~~~~ 339 (534)
|||+++++|.+.+.....+++..++.++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|||++.....
T Consensus 100 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 99999999999998777899999999999999999999999 99999999999999754 4799999999987643
Q ss_pred CCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
... .....||..|+|||.+.+ .++.++||||||+++|||++|+.||..... .+....+...... .+.
T Consensus 177 ~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~---~~~ 243 (287)
T 2wei_A 177 NTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-------YDILKRVETGKYA---FDL 243 (287)
T ss_dssp CSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHCCCC---CCS
T ss_pred CCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHcCCCC---CCc
Confidence 321 233458999999998865 589999999999999999999999974321 1122222211100 000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.... ..+..+.+++.+|++.+|.+|||+.|+++
T Consensus 244 ~~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 244 PQWR----TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp GGGT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhh----hcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 0001 12347899999999999999999999986
No 240
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=319.70 Aligned_cols=247 Identities=21% Similarity=0.297 Sum_probs=180.2
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh--------------hhhhhcccCceeeEEEEEe------------
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK--------------DMISLAVHRNLLRLIGYCA------------ 254 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~--------------~~l~~~~h~niv~l~~~~~------------ 254 (534)
++|...+.||+|+||.||+|... +++.||||++. +++..++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 57888899999999999999986 48999999874 2677889999999999874
Q ss_pred --CCCeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeC-CCCcEEEEec
Q 039819 255 --TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLD-DFCEAIVGDF 331 (534)
Q Consensus 255 --~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~-~~~~~kl~DF 331 (534)
+....++||||++ |+|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+|||++ +++.+||+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccC
Confidence 3467799999998 699998865 4689999999999999999999999 999999999999997 5679999999
Q ss_pred ccceecCCCCC--ceeecccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHh
Q 039819 332 GLAKLLDHSDS--HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQ 408 (534)
Q Consensus 332 Gla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 408 (534)
|+++....... .......+|..|+|||.+.+ ..++.++|||||||++|||+||+.||.......... .......
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~ 242 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ---LILESIP 242 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHHSC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHhcC
Confidence 99987643211 12233457899999998865 678999999999999999999999997544221111 1111000
Q ss_pred h---------hcccceecccccCC-CC-----CHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 409 Q---------EKKVEVLVDRELGS-NY-----DRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 409 ~---------~~~~~~~~d~~l~~-~~-----~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
. .......+...... .. ....+..+.+++.+|++.||.+|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0 00000000000000 00 0112457899999999999999999999985
No 241
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=316.02 Aligned_cols=236 Identities=24% Similarity=0.365 Sum_probs=171.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
.++|...+.||+|+||.||+|+.. +++.||||++.. ++....||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 357888899999999999999985 689999998852 456678999999999999999999999
Q ss_pred eccCCCChhhhcc-cCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCC
Q 039819 264 PYMSNGSVASRLR-EKPALDWNTRKRIAIGAARGLLYLHE-QCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD 341 (534)
Q Consensus 264 e~~~~gsL~~~l~-~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~ 341 (534)
||+ ++.+..+.. ....+++..+..++.|++.||.|||+ . +|+||||||+|||++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 445544443 25679999999999999999999998 5 89999999999999999999999999998664332
Q ss_pred Cceeeccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhccccee
Q 039819 342 SHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVL 416 (534)
Q Consensus 342 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (534)
......||+.|+|||++. ...++.++|||||||++|||+||+.||..... ..+..........
T Consensus 180 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~---- 247 (318)
T 2dyl_A 180 --AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT------DFEVLTKVLQEEP---- 247 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHHHHHSCC----
T ss_pred --cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc------cHHHHHHHhccCC----
Confidence 223456899999999984 45688999999999999999999999974221 1111122211111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 417 VDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 417 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
+.+.. ....+..+.+++.+|++.+|.+||++.++++
T Consensus 248 --~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 --PLLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp --CCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --CCCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 01110 0112347889999999999999999999975
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.7e-38 Score=321.32 Aligned_cols=247 Identities=18% Similarity=0.266 Sum_probs=187.7
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CC-cEEEEEEehh-------------hhhhcccCc------eeeEEEEEeCCCeeE
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DG-TVLAVKRLKD-------------MISLAVHRN------LLRLIGYCATPTERL 260 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~-------------~l~~~~h~n------iv~l~~~~~~~~~~~ 260 (534)
++|...+.||+|+||.||+|... ++ ..||||++.. ++..+.|++ ++.+.+++......+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC 98 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence 67888999999999999999974 34 7899999852 456666665 999999999999999
Q ss_pred EEeeccCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe------------------
Q 039819 261 LVYPYMSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL------------------ 320 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl------------------ 320 (534)
+||||+ +++|.+.+... ..+++..++.|+.|++.||.|||+. +|+||||||+|||+
T Consensus 99 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 99 IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred EEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccccc
Confidence 999999 66777777543 4699999999999999999999998 99999999999999
Q ss_pred -CCCCcEEEEecccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccch
Q 039819 321 -DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGA 399 (534)
Q Consensus 321 -~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~ 399 (534)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...........
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 250 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 250 (355)
T ss_dssp EESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 56889999999999875432 2345699999999999998999999999999999999999999975432211111
Q ss_pred HHHHHHHHh-----hhcccceecccc---------------------cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHH
Q 039819 400 MLEWVKKIQ-----QEKKVEVLVDRE---------------------LGSNYDRIEVGEILQVALLCTQYLPVHRPKMSE 453 (534)
Q Consensus 400 ~~~~~~~~~-----~~~~~~~~~d~~---------------------l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~e 453 (534)
+........ ............ ............+.+++.+|++.||.+|||+.|
T Consensus 251 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e 330 (355)
T 2eu9_A 251 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE 330 (355)
T ss_dssp HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHH
Confidence 111000000 000000000000 000112234568899999999999999999999
Q ss_pred HHH
Q 039819 454 VVR 456 (534)
Q Consensus 454 v~~ 456 (534)
+++
T Consensus 331 ~l~ 333 (355)
T 2eu9_A 331 ALL 333 (355)
T ss_dssp HTT
T ss_pred Hhc
Confidence 974
No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.5e-38 Score=332.54 Aligned_cols=236 Identities=25% Similarity=0.305 Sum_probs=176.8
Q ss_pred CCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-----------hhhhc-ccCceeeEEEEEeCCCeeEEEeeccCCCCh
Q 039819 204 FSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-----------MISLA-VHRNLLRLIGYCATPTERLLVYPYMSNGSV 271 (534)
Q Consensus 204 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-----------~l~~~-~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 271 (534)
|...+.||+|+||+||.+...+|+.||||++.. ++..+ +|||||++++++.+....++||||+. |+|
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 344678999999999877777899999998742 44444 79999999999999999999999996 699
Q ss_pred hhhcccCCCC-------CHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCC-------------CcEEEEec
Q 039819 272 ASRLREKPAL-------DWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDF-------------CEAIVGDF 331 (534)
Q Consensus 272 ~~~l~~~~~l-------~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~-------------~~~kl~DF 331 (534)
.+++...... ++..++.|+.||+.||.|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 9999754332 2334578999999999999999 99999999999999654 58999999
Q ss_pred ccceecCCCCCc---eeecccccccccccccccc-------CCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchH
Q 039819 332 GLAKLLDHSDSH---VTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAM 400 (534)
Q Consensus 332 Gla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~ 400 (534)
|+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||...... .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~ 247 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-----E 247 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-----H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-----H
Confidence 999987543221 1234579999999999865 568999999999999999999 99999643211 0
Q ss_pred HHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 401 LEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 401 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
..... ..... +..........+.++.+++.+|++.+|.+|||+.||++
T Consensus 248 ~~i~~---~~~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 SNIIR---GIFSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHH---TCCCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHhc---CCCCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11111 00000 11112224455678999999999999999999999986
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=331.36 Aligned_cols=236 Identities=23% Similarity=0.309 Sum_probs=177.8
Q ss_pred hCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh-----------hhhhc-ccCceeeEEEEEeCCCeeEEEeeccCCC
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD-----------MISLA-VHRNLLRLIGYCATPTERLLVYPYMSNG 269 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-----------~l~~~-~h~niv~l~~~~~~~~~~~lv~e~~~~g 269 (534)
.+|...+.||+|+||+||.....+++.||||++.. ++..+ +|||||++++++.+....++|||||. |
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g 102 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-A 102 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-C
Confidence 35777889999999997666666889999998852 56666 79999999999999999999999996 5
Q ss_pred ChhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC-----CCcEEEEecccceecCCCCC-
Q 039819 270 SVASRLREKP-ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD-----FCEAIVGDFGLAKLLDHSDS- 342 (534)
Q Consensus 270 sL~~~l~~~~-~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~-----~~~~kl~DFGla~~~~~~~~- 342 (534)
+|.+++.... .+.+..+..|+.||+.||.|||+. +|+||||||+|||++. ...+||+|||+++.......
T Consensus 103 ~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~ 179 (432)
T 3p23_A 103 TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179 (432)
T ss_dssp EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------
T ss_pred CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc
Confidence 9999987543 456667789999999999999999 9999999999999943 34688999999987653321
Q ss_pred -ceeeccccccccccccccc---cCCCCcchhHHHHHHHHHHHHh-CCCCcCCCccccccchHHHHHHHHhhhcccceec
Q 039819 343 -HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELIT-GMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLV 417 (534)
Q Consensus 343 -~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~S~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (534)
.......||+.|+|||++. ...++.++|||||||++|||+| |+.||..... .............
T Consensus 180 ~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~--------~~~~~~~~~~~~~--- 248 (432)
T 3p23_A 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ--------RQANILLGACSLD--- 248 (432)
T ss_dssp ------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT--------HHHHHHTTCCCCT---
T ss_pred eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH--------HHHHHHhccCCcc---
Confidence 2234467999999999997 4567889999999999999999 9999853211 1111111110000
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 418 DRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 418 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
.. .........+.+++.+|++.+|.+|||+.||++
T Consensus 249 --~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 --CL--HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp --TS--CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --cc--CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 00 111233456789999999999999999999985
No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.1e-37 Score=339.83 Aligned_cols=223 Identities=19% Similarity=0.264 Sum_probs=180.5
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC--CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeCCCe-----e
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG--DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCATPTE-----R 259 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~~~~-----~ 259 (534)
++|...+.||+|+||.||+|.+. +++.||||++. +++..++|||||++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67889999999999999999985 58999999874 25788899999999999987655 6
Q ss_pred EEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCC
Q 039819 260 LLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH 339 (534)
Q Consensus 260 ~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~ 339 (534)
|+||||+++++|.+++.. .+++..++.|+.||+.||.|||++ +||||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 999999999999988765 699999999999999999999999 99999999999999985 999999999987654
Q ss_pred CCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceeccc
Q 039819 340 SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDR 419 (534)
Q Consensus 340 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 419 (534)
. ....||++|+|||++.++. +.++|||||||++|||++|..||....... +
T Consensus 234 ~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------------------~--- 284 (681)
T 2pzi_A 234 F-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG--------------------L--- 284 (681)
T ss_dssp C-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS--------------------C---
T ss_pred C-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc--------------------c---
Confidence 3 3456999999999987654 889999999999999999998876311000 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCC-hHHHHHHhhc
Q 039819 420 ELGSNYDRIEVGEILQVALLCTQYLPVHRPK-MSEVVRMLEG 460 (534)
Q Consensus 420 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt-~~ev~~~L~~ 460 (534)
............+.+++.+|++.+|.+||+ ++++...|.+
T Consensus 285 -~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 285 -PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp -CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred -cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 000001112357889999999999999996 5555555553
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.2e-37 Score=338.52 Aligned_cols=243 Identities=25% Similarity=0.356 Sum_probs=186.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEeh---------------hhhhhcccCceeeEEEEEeC------CCe
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLK---------------DMISLAVHRNLLRLIGYCAT------PTE 258 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---------------~~l~~~~h~niv~l~~~~~~------~~~ 258 (534)
.++|...+.||+|+||.||+|... +++.||||++. +++..++||||+++++++.. ...
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999874 68999999864 26788899999999999765 667
Q ss_pred eEEEeeccCCCChhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCc---EEEEecc
Q 039819 259 RLLVYPYMSNGSVASRLREKP---ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCE---AIVGDFG 332 (534)
Q Consensus 259 ~~lv~e~~~~gsL~~~l~~~~---~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~---~kl~DFG 332 (534)
.++||||+++|+|.+++.... .+++..++.|+.+++.||.|||+. +|+||||||+|||++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 799999999999999997543 699999999999999999999998 9999999999999997665 9999999
Q ss_pred cceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcc
Q 039819 333 LAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKK 412 (534)
Q Consensus 333 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (534)
++....... ......||..|+|||++.+..++.++|||||||++|||+||+.||..... ...|.........
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~------~~~~~~~i~~~~~ 241 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ------PVQWHGKVREKSN 241 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH------HHHSSTTCC----
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc------hhhhhhhhhcccc
Confidence 998765432 23446799999999999999999999999999999999999999974321 1122111111110
Q ss_pred cceecc----------cc--cCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHH
Q 039819 413 VEVLVD----------RE--LGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEV 454 (534)
Q Consensus 413 ~~~~~d----------~~--l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev 454 (534)
...... .. .........+..+.+++.+|++.||++|||+.|+
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000000 00 1112334467789999999999999999999875
No 247
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=6.4e-36 Score=298.38 Aligned_cols=215 Identities=19% Similarity=0.285 Sum_probs=169.8
Q ss_pred hCCCcC-CeeccCCcEEEEEEEE-CCCcEEEEEEehh----------hhhhcccCceeeEEEEEeC----CCeeEEEeec
Q 039819 202 ENFSSK-NILGAGGFGNVYKGKL-GDGTVLAVKRLKD----------MISLAVHRNLLRLIGYCAT----PTERLLVYPY 265 (534)
Q Consensus 202 ~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~----------~l~~~~h~niv~l~~~~~~----~~~~~lv~e~ 265 (534)
++|... +.||+|+||.||+|.. .+++.||||++.. +.....||||+++++++.. ....++||||
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 96 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 96 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEee
Confidence 456665 7899999999999997 4689999999863 3366689999999999876 6678999999
Q ss_pred cCCCChhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC---CCcEEEEecccceecCCC
Q 039819 266 MSNGSVASRLREK--PALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD---FCEAIVGDFGLAKLLDHS 340 (534)
Q Consensus 266 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~---~~~~kl~DFGla~~~~~~ 340 (534)
+++|+|.+++... ..+++..++.++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-- 171 (299)
T 3m2w_A 97 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-- 171 (299)
T ss_dssp CCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT--
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc--
Confidence 9999999999754 3699999999999999999999999 9999999999999998 7899999999987542
Q ss_pred CCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccc
Q 039819 341 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRE 420 (534)
Q Consensus 341 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 420 (534)
+..++.++|||||||++|||+||+.||......... ......+....
T Consensus 172 ---------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~------------~~~~~~~~~~~ 218 (299)
T 3m2w_A 172 ---------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------------PGMKTRIRMGQ 218 (299)
T ss_dssp ---------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------------CCSCCSSCTTC
T ss_pred ---------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh------------HHHHHHHhhcc
Confidence 234678999999999999999999999643211100 00000000000
Q ss_pred cCCCCCH----HHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 421 LGSNYDR----IEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 421 l~~~~~~----~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
...+. ..+..+.+++.+|++.+|.+|||+.|+++
T Consensus 219 --~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 219 --YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp --CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 01111 12457899999999999999999999985
No 248
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.2e-35 Score=294.69 Aligned_cols=213 Identities=13% Similarity=0.028 Sum_probs=170.1
Q ss_pred hCCCcCCeeccCCcEEEEEEEEC-CCcEEEEEEehh-----------------hhhhcccCceeeEEEEEeCCCeeEEEe
Q 039819 202 ENFSSKNILGAGGFGNVYKGKLG-DGTVLAVKRLKD-----------------MISLAVHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~-----------------~l~~~~h~niv~l~~~~~~~~~~~lv~ 263 (534)
++|...+.||+|+||.||+|+.. +++.||||.+.. .+..+.||||+++++++...+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888899999999999999986 489999998852 467788999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||+++++|.+++... ....++.+|+.|++.||.|||++ +|+||||||+|||++.++.+||+++
T Consensus 111 e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~------------ 173 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYP------------ 173 (286)
T ss_dssp ECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSC------------
T ss_pred EecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEec------------
Confidence 999999999999654 35667889999999999999999 9999999999999999999999743
Q ss_pred eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCC
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGS 423 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 423 (534)
+|++ .++.++|||||||++|||+||+.||........... ....+......
T Consensus 174 ---------~~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-------------~~~~~~~~~~~ 224 (286)
T 3uqc_A 174 ---------ATMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP-------------AERDTAGQPIE 224 (286)
T ss_dssp ---------CCCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE-------------CCBCTTSCBCC
T ss_pred ---------cccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH-------------HHHHhccCCCC
Confidence 3444 368899999999999999999999985433211000 00000000000
Q ss_pred --CCCHHHHHHHHHHHHHhcccCCCCCCChHHHHHHhhcC
Q 039819 424 --NYDRIEVGEILQVALLCTQYLPVHRPKMSEVVRMLEGD 461 (534)
Q Consensus 424 --~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~~L~~~ 461 (534)
......+..+.+++.+||+.||.+| |+.|+++.|+..
T Consensus 225 ~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~ 263 (286)
T 3uqc_A 225 PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA 263 (286)
T ss_dssp HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence 0011124578999999999999999 999999999863
No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=9.1e-37 Score=309.67 Aligned_cols=228 Identities=14% Similarity=0.165 Sum_probs=172.9
Q ss_pred HhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh----------------------hhhhcc---------cCceeeE
Q 039819 201 TENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD----------------------MISLAV---------HRNLLRL 249 (534)
Q Consensus 201 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~----------------------~l~~~~---------h~niv~l 249 (534)
.++|...+.||+|+||.||+|+. +++.||||++.. +++.++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688889999999999999998 789999998751 234443 7777777
Q ss_pred EEEEe------------------------------CCCeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 039819 250 IGYCA------------------------------TPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLY 299 (534)
Q Consensus 250 ~~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~y 299 (534)
.+.+. .....++||||+++|++.+.+.+ ..+++..++.|+.||+.||.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHH
Confidence 76642 26788999999999987777754 568999999999999999999
Q ss_pred HH-hcCCCCeEeccCCCCcEEeCCCC--------------------cEEEEecccceecCCCCCceeecccccccccccc
Q 039819 300 LH-EQCDPKIIHRDVKAANVLLDDFC--------------------EAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPE 358 (534)
Q Consensus 300 LH-~~~~~~ivH~Dlkp~NiLl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE 358 (534)
|| +. +||||||||+|||++.++ .+||+|||+|+..... ...||+.|+|||
T Consensus 177 lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE 247 (336)
T 2vuw_A 177 AEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDED 247 (336)
T ss_dssp HHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSG
T ss_pred HHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChh
Confidence 99 88 999999999999999887 8999999999976532 246999999999
Q ss_pred ccccCCCCcchhHHHHHHH-HHHHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHH
Q 039819 359 YLSTGQSSEKTDVFGFGIL-LLELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVA 437 (534)
Q Consensus 359 ~~~~~~~~~k~Dv~S~Gvv-l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~ 437 (534)
++.+.. +.++||||+|++ .+++++|..||.. ..|.......-..................+.++.+++
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli 316 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN----------VLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFH 316 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH----------HHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHH
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcc----------hhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHH
Confidence 997665 899999998777 7889999999851 1222211111000000011111111234567899999
Q ss_pred HHhcccCCCCCCChHHHH
Q 039819 438 LLCTQYLPVHRPKMSEVV 455 (534)
Q Consensus 438 ~~Cl~~~P~~RPt~~ev~ 455 (534)
.+|++.+ |++|++
T Consensus 317 ~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 317 RTMLNFS-----SATDLL 329 (336)
T ss_dssp HHGGGSS-----SHHHHH
T ss_pred HHHhccC-----CHHHHH
Confidence 9999976 888887
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-36 Score=314.80 Aligned_cols=224 Identities=14% Similarity=0.145 Sum_probs=166.0
Q ss_pred hCCCcCCeeccCCcEEEEEEEE-CCCcEEEEEEehh-----------------hhhhccc-Cc---------ee------
Q 039819 202 ENFSSKNILGAGGFGNVYKGKL-GDGTVLAVKRLKD-----------------MISLAVH-RN---------LL------ 247 (534)
Q Consensus 202 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~-----------------~l~~~~h-~n---------iv------ 247 (534)
.+|...+.||+|+||.||+|+. .+|+.||||++.. ++..+.| +| ++
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 3455678999999999999996 4789999998861 3444544 11 11
Q ss_pred e------EEEEEeC-----CCeeEEEeeccCCCChhhhcc-------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 039819 248 R------LIGYCAT-----PTERLLVYPYMSNGSVASRLR-------EKPALDWNTRKRIAIGAARGLLYLHEQCDPKII 309 (534)
Q Consensus 248 ~------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~-------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~iv 309 (534)
. +..++.. ....+++|+++ +++|.+++. ....+++..++.|+.|+++||+|||++ +||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1 1111111 12346666665 679998884 134588899999999999999999999 999
Q ss_pred eccCCCCcEEeCCCCcEEEEecccceecCCCCCceeecccccccccccccc----------ccCCCCcchhHHHHHHHHH
Q 039819 310 HRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYL----------STGQSSEKTDVFGFGILLL 379 (534)
Q Consensus 310 H~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~k~Dv~S~Gvvl~ 379 (534)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999875432 445567 999999999 5556888999999999999
Q ss_pred HHHhCCCCcCCCccccccchHHHHHHHHhhhcccceecccccCCCCCHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 039819 380 ELITGMRALEFGKSINQKGAMLEWVKKIQQEKKVEVLVDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKMSEVVR 456 (534)
Q Consensus 380 elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPt~~ev~~ 456 (534)
||+||+.||......... ..++... ... +..+.+++.+||+.+|++||++.++++
T Consensus 309 elltg~~Pf~~~~~~~~~----------------~~~~~~~--~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGGS----------------EWIFRSC--KNI----PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHSSCCCCTTGGGSCS----------------GGGGSSC--CCC----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHCCCCCCCcchhhhH----------------HHHHhhc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999999743321110 0011100 112 357899999999999999999988865
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=8.6e-30 Score=275.57 Aligned_cols=171 Identities=16% Similarity=0.056 Sum_probs=121.4
Q ss_pred eccCCcEEEEEEE-ECCCcEEEEEEehh------------------------hhhhc-ccCceeeEEEEEeCCCeeEEEe
Q 039819 210 LGAGGFGNVYKGK-LGDGTVLAVKRLKD------------------------MISLA-VHRNLLRLIGYCATPTERLLVY 263 (534)
Q Consensus 210 lG~G~~g~Vy~~~-~~~~~~vavK~~~~------------------------~l~~~-~h~niv~l~~~~~~~~~~~lv~ 263 (534)
.+.|+.|.+..++ .-.|+.+|||.+.. ++.++ .|+||+++++++++....||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566666666543 33577899998841 45665 6999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCc
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH 343 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~ 343 (534)
||++|++|.+++...+.++.. +|+.||+.||+|+|++ +||||||||+|||++.++.+||+|||+|+.......
T Consensus 322 Eyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~- 394 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS- 394 (569)
T ss_dssp ECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---C-
T ss_pred ecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCCc-
Confidence 999999999999988888764 5889999999999999 999999999999999999999999999997654322
Q ss_pred eeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCc
Q 039819 344 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRAL 388 (534)
Q Consensus 344 ~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~ 388 (534)
.....+||++|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 3345679999999999864 5677899999999998887765543
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=7.8e-27 Score=250.99 Aligned_cols=170 Identities=15% Similarity=0.203 Sum_probs=136.9
Q ss_pred CcCCeeccCCcEEEEEEEECCCcEEEEEEeh----------------------hhhhhcccCceeeEEEEEeCCCeeEEE
Q 039819 205 SSKNILGAGGFGNVYKGKLGDGTVLAVKRLK----------------------DMISLAVHRNLLRLIGYCATPTERLLV 262 (534)
Q Consensus 205 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~----------------------~~l~~~~h~niv~l~~~~~~~~~~~lv 262 (534)
...+.||+|+||.||+|+. .+..+|+|+.. +++.+++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 56788888742 257788999999777777777888999
Q ss_pred eeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCC
Q 039819 263 YPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS 342 (534)
Q Consensus 263 ~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~ 342 (534)
|||+++|+|.+++.. +..|+.|+++||.|||++ +|+||||||+|||++. .+||+|||+++.......
T Consensus 418 mE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 418 MSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp EECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred EECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 999999999999976 568999999999999999 9999999999999999 999999999998754322
Q ss_pred ce------eecccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCc
Q 039819 343 HV------TTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITGMRAL 388 (534)
Q Consensus 343 ~~------~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~S~Gvvl~elltG~~p~ 388 (534)
.. .....||+.|||||++.. ..|+..+|+||..+-.++.+.++.+|
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 11 235679999999999976 56788899999999999998887765
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1e-22 Score=201.03 Aligned_cols=138 Identities=14% Similarity=0.054 Sum_probs=109.9
Q ss_pred HHHHHHHhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh--------------------------------hhhhcc
Q 039819 195 RELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD--------------------------------MISLAV 242 (534)
Q Consensus 195 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~--------------------------------~l~~~~ 242 (534)
..+......|...+.||+|+||.||+|+..+|+.||||.+.. ++..+.
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344444455666799999999999999997799999998831 344444
Q ss_pred cCceeeEEEEEeCCCeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCC
Q 039819 243 HRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD 322 (534)
Q Consensus 243 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~ 322 (534)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|||++
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~- 227 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS- 227 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-
Confidence 4 666665533 55699999999999998 532 23457999999999999998 999999999999999
Q ss_pred CCcEEEEecccceecCCCCCceeeccccccccccccccc
Q 039819 323 FCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLS 361 (534)
Q Consensus 323 ~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 361 (534)
++.+||+|||+++. +..|+|||++.
T Consensus 228 ~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 228 EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 99999999999973 34578999874
No 254
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=4e-19 Score=168.75 Aligned_cols=131 Identities=24% Similarity=0.301 Sum_probs=118.1
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..++
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~------- 104 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLF------- 104 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCT-------
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCC-------
Confidence 4799999999999987778999999999999999999988899999999999999999999966666677777
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceec
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICG 152 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg 152 (534)
+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+. +.+.+.+|||.|.
T Consensus 105 -------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 105 -------SLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp -------TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred -------CCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 889999999999988899999999999999999999977665443 5678999999984
No 255
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=9e-19 Score=167.32 Aligned_cols=131 Identities=22% Similarity=0.240 Sum_probs=115.7
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..++
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~------- 112 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLV------- 112 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-------
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcch-------
Confidence 4799999999999998899999999999999999999855556689999999999999999977777777777
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceecC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICGS 153 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg~ 153 (534)
+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+. +.+.+.+|||.|..
T Consensus 113 -------~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 113 -------HLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp -------TCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred -------hhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 8899999999999 8999999999999999999999966554443 56789999998853
No 256
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=1.4e-18 Score=164.95 Aligned_cols=131 Identities=20% Similarity=0.222 Sum_probs=117.9
Q ss_pred cEEEEEecCCCceeecc-cccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 9 LVIGLGAPSQSLSGTLS-GSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.++.|+|++|+|++..| ..|+.+++|++|+|++|+|++..|.+|.++++|++|+|++|+|++..|..|..++
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~------- 105 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLE------- 105 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCS-------
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCc-------
Confidence 57899999999998765 4689999999999999999987777999999999999999999988888888887
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceecC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICGS 153 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg~ 153 (534)
+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+. +.+.+.+|||.|..
T Consensus 106 -------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 106 -------SLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp -------SCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred -------CCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 889999999999988899999999999999999999987786654 56789999999853
No 257
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.76 E-value=5.7e-19 Score=198.27 Aligned_cols=134 Identities=31% Similarity=0.478 Sum_probs=123.0
Q ss_pred EEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccccccC
Q 039819 13 LGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRKCS 92 (534)
Q Consensus 13 L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~~~~ 92 (534)
++++.|.++|.+|..|+++++|++|+|++|+|+|.+|.+|++|++|+.|+|++|+|+|.+|..++.+.
T Consensus 613 ~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~------------ 680 (768)
T 3rgz_A 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR------------ 680 (768)
T ss_dssp SCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT------------
T ss_pred cccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCC------------
Confidence 45667999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC----ccccccCCcceecCCCCCcccC
Q 039819 93 GVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA----RTFNVAGNPLICGSSSTNVCSG 161 (534)
Q Consensus 93 ~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~----~~~~~~~N~~~cg~~~~~~~~~ 161 (534)
+|+.|+|++|+|+|.+|..|+.+++|+.|||++|+|+|.+|.... ....+.|||..||.+.. .|..
T Consensus 681 --~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~ 750 (768)
T 3rgz_A 681 --GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 750 (768)
T ss_dssp --TCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCS
T ss_pred --CCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCC
Confidence 889999999999999999999999999999999999999997532 45578899999997654 6754
No 258
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.76 E-value=5.2e-19 Score=177.17 Aligned_cols=135 Identities=26% Similarity=0.438 Sum_probs=120.9
Q ss_pred CceecCC---CcEEEEEecCCCcee--ecccccccCCCCCEEEccC-CccCcCCCCCCCCCCCCCEEEcCCCcCccccCc
Q 039819 1 MITCSPE---NLVIGLGAPSQSLSG--TLSGSIGNLTNLRQVLLQN-NNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPA 74 (534)
Q Consensus 1 ~v~c~~~---~~l~~L~l~~n~l~g--~~p~~~~~l~~L~~L~L~~-N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~ 74 (534)
||+|... ++|+.|+|++|+|+| .+|..|+++++|++|+|++ |++++.+|.+|+++++|++|+|++|+|++.+|.
T Consensus 40 gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~ 119 (313)
T 1ogq_A 40 GVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD 119 (313)
T ss_dssp TEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCG
T ss_pred ceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCH
Confidence 7999843 799999999999999 9999999999999999994 999999999999999999999999999999999
Q ss_pred hhhhcccCcccccccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC------ccccccCCc
Q 039819 75 LLFLSIWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA------RTFNVAGNP 148 (534)
Q Consensus 75 ~~~~l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~------~~~~~~~N~ 148 (534)
.+..++ +|++|+|++|.+++.+|..|..+++|+.|+|++|+++|.+|..+. +.+.+.+|.
T Consensus 120 ~~~~l~--------------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 120 FLSQIK--------------TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR 185 (313)
T ss_dssp GGGGCT--------------TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE
T ss_pred HHhCCC--------------CCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCe
Confidence 999888 888899999999999999999999999999999999988886443 345666665
Q ss_pred c
Q 039819 149 L 149 (534)
Q Consensus 149 ~ 149 (534)
+
T Consensus 186 l 186 (313)
T 1ogq_A 186 L 186 (313)
T ss_dssp E
T ss_pred e
Confidence 5
No 259
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=2.2e-18 Score=167.71 Aligned_cols=123 Identities=20% Similarity=0.248 Sum_probs=95.4
Q ss_pred CCcCCeeccCCcEEEEEEEE-CCCcE--EEEEEeh--------------------------------------hhhhhcc
Q 039819 204 FSSKNILGAGGFGNVYKGKL-GDGTV--LAVKRLK--------------------------------------DMISLAV 242 (534)
Q Consensus 204 ~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~--------------------------------------~~l~~~~ 242 (534)
|...+.||+|+||.||+|.. .+|+. ||||.++ ..+..+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999998 68888 9999742 1345556
Q ss_pred cCce--eeEEEEEeCCCeeEEEeeccCC-C----ChhhhcccCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEeccCC
Q 039819 243 HRNL--LRLIGYCATPTERLLVYPYMSN-G----SVASRLREKPALDWNTRKRIAIGAARGLLYLH-EQCDPKIIHRDVK 314 (534)
Q Consensus 243 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH-~~~~~~ivH~Dlk 314 (534)
|+++ ..++++ ...+|||||+.+ | +|.+.... .++..+..++.|++.||.||| +. +|||||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEA---ELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCC
Confidence 6653 334432 356899999952 4 56555432 234567889999999999999 77 99999999
Q ss_pred CCcEEeCCCCcEEEEecccceecC
Q 039819 315 AANVLLDDFCEAIVGDFGLAKLLD 338 (534)
Q Consensus 315 p~NiLl~~~~~~kl~DFGla~~~~ 338 (534)
|+|||++. .++|+|||+|....
T Consensus 199 p~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEETT
T ss_pred HHHEEEcC--cEEEEECcccccCC
Confidence 99999998 99999999998653
No 260
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.74 E-value=2.9e-18 Score=171.76 Aligned_cols=151 Identities=31% Similarity=0.453 Sum_probs=105.4
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCC-CCCEEEcCCCcCccccCchhhhc-------
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLP-KLQTLDLSNNRLSGVIPALLFLS------- 79 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l------- 79 (534)
.+++.|+|++|+|++.+|..|+.+++|++|+|++|+|+|.+|..|+.++ +|++|+|++|+|+|.+|..+..+
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~L 204 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDL 204 (313)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEEC
T ss_pred CCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEEC
Confidence 3566666666666666666666666666666666666666666666665 66666666666666666555443
Q ss_pred ----------------ccCcccccccc-c--------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCC
Q 039819 80 ----------------IWLPRKWDKRK-C--------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPV 134 (534)
Q Consensus 80 ----------------~~l~~~~~~~~-~--------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~ 134 (534)
+.|..+..+.+ . ...+|+.|+|++|+|++.+|..|..+++|+.|+|++|+|+|.+
T Consensus 205 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 284 (313)
T 1ogq_A 205 SRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284 (313)
T ss_dssp CSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred cCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccC
Confidence 33332221111 0 1137899999999999999999999999999999999999999
Q ss_pred CCCCC----ccccccCCcceecCCCCCcc
Q 039819 135 PKFPA----RTFNVAGNPLICGSSSTNVC 159 (534)
Q Consensus 135 p~~~~----~~~~~~~N~~~cg~~~~~~~ 159 (534)
|.... +.+.+.+||+.|+.+.. .|
T Consensus 285 p~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 285 PQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp CCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CCCccccccChHHhcCCCCccCCCCC-CC
Confidence 97632 56789999999986443 45
No 261
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.73 E-value=1e-17 Score=162.26 Aligned_cols=145 Identities=23% Similarity=0.200 Sum_probs=118.5
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|++..+..|+++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..++.|..+..
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 46899999999999888888999999999999999999877778999999999999999999777777777776665532
Q ss_pred ccc---------c-CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceec
Q 039819 88 KRK---------C-SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICG 152 (534)
Q Consensus 88 ~~~---------~-~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg 152 (534)
+++ + ...+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+. +.+.+.+|+|.|.
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 221 1 123788999999999977677899999999999999999976665443 5678899999875
No 262
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.72 E-value=1.6e-17 Score=155.86 Aligned_cols=132 Identities=23% Similarity=0.221 Sum_probs=114.1
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|+|++..+..|+++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..+..++
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~------- 100 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLT------- 100 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-------
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCcc-------
Confidence 3699999999999977777799999999999999999965556689999999999999999977666677777
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceecC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICGS 153 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg~ 153 (534)
+|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+..+. +.+.+.+|+|.|..
T Consensus 101 -------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 101 -------QLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp -------TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred -------CCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 889999999999977777899999999999999999976654433 56788999998754
No 263
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=5.3e-17 Score=150.58 Aligned_cols=113 Identities=20% Similarity=0.273 Sum_probs=67.8
Q ss_pred cEEEEEecCCCceeeccc-ccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 9 LVIGLGAPSQSLSGTLSG-SIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.++.|+|++|+|++..+. .|+.+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..++
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~------- 102 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLH------- 102 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCT-------
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCC-------
Confidence 455666666666544433 356666666666666666655566666666666666666666655555555554
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVP 135 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 135 (534)
+|+.|+|++|+|++..|..|..+++|+.|+|++|.+++..+
T Consensus 103 -------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 103 -------QLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp -------TCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred -------CCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 55566666666666666666666666666666666665443
No 264
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.70 E-value=6.9e-18 Score=185.38 Aligned_cols=120 Identities=23% Similarity=0.310 Sum_probs=97.5
Q ss_pred CceecCCCcEEEEEecCCCceeecccccccCCCCCEEEccCC--------------------------------------
Q 039819 1 MITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNN-------------------------------------- 42 (534)
Q Consensus 1 ~v~c~~~~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N-------------------------------------- 42 (534)
||+|+..++|+.|+|++|+|+|.+|++|++|++|++|+|++|
T Consensus 74 GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~ 153 (636)
T 4eco_A 74 GVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYD 153 (636)
T ss_dssp TEEECTTCCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCC
T ss_pred CeEEcCCCCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccC
Confidence 899987789999999999999999999999999999999988
Q ss_pred ----------------------------------------ccCcCCCCCCCCCCCCCEEEcCCCcCccc-----------
Q 039819 43 ----------------------------------------NISGGIPPQLGSLPKLQTLDLSNNRLSGV----------- 71 (534)
Q Consensus 43 ----------------------------------------~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~----------- 71 (534)
+|+| +|.+|++|++|++|+|++|+|+|.
T Consensus 154 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~ 232 (636)
T 4eco_A 154 PREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENS 232 (636)
T ss_dssp GGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred chhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccccc
Confidence 4556 899999999999999999999986
Q ss_pred ------cCchhh--hcccCcccccccccCCccccceeCCCCcCcccCChhhhcccccccccccCCC-CCC-CCC
Q 039819 72 ------IPALLF--LSIWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNN-LSG-PVP 135 (534)
Q Consensus 72 ------~p~~~~--~l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~-l~g-~~p 135 (534)
+|..++ .++ +|++|+|++|++.|.+|..|+++++|+.|+|++|+ ++| .+|
T Consensus 233 ~~~~~~ip~~l~~~~l~--------------~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp 292 (636)
T 4eco_A 233 EYAQQYKTEDLKWDNLK--------------DLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLK 292 (636)
T ss_dssp HHHHHHTTSCCCGGGCT--------------TCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHH
T ss_pred chhcccCchhhhhcccC--------------CCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccch
Confidence 898888 888 55556666666655666666666666666666665 555 444
No 265
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=2e-17 Score=153.48 Aligned_cols=126 Identities=23% Similarity=0.352 Sum_probs=111.9
Q ss_pred EEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCC-CCCCCCCCCEEEcCCCcCccccCchhhhcccCccccccc
Q 039819 11 IGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPP-QLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKR 89 (534)
Q Consensus 11 ~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~ 89 (534)
+.|++++|+|+ .+|..+.. +|++|+|++|+|++..|. .|+.+++|++|+|++|+|++.+|..|..+.
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--------- 78 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGAS--------- 78 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCT---------
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcc---------
Confidence 57999999997 78887754 999999999999965554 489999999999999999999899998888
Q ss_pred ccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceecC
Q 039819 90 KCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICGS 153 (534)
Q Consensus 90 ~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg~ 153 (534)
+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.+|..+. +.+.+.+|+|.|..
T Consensus 79 -----~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 79 -----HIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp -----TCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred -----cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 889999999999998889999999999999999999988887654 56789999998853
No 266
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.69 E-value=5.6e-17 Score=160.54 Aligned_cols=141 Identities=26% Similarity=0.247 Sum_probs=92.1
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|++..+ . +.+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|..++.|..+..
T Consensus 55 ~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 356666666666664322 2 55666666666666666 55666666666666666666666555555555554444322
Q ss_pred ccc---------c-CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceec
Q 039819 88 KRK---------C-SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICG 152 (534)
Q Consensus 88 ~~~---------~-~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg 152 (534)
+++ + ...+|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+. +.+.+.+|||.|.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 111 0 1127889999999999666667788999999999999999 5665443 4577899999985
No 267
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.69 E-value=7.8e-17 Score=157.93 Aligned_cols=145 Identities=20% Similarity=0.150 Sum_probs=103.4
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|++ + +.++.+++|++|+|++|+|++..|..|+++++|++|+|++|+|++..|..+..++.|..+..
T Consensus 63 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 457777777777775 3 36777777777777777777555555677777777777777777666665666665544432
Q ss_pred ccc---------c-CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceec
Q 039819 88 KRK---------C-SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICG 152 (534)
Q Consensus 88 ~~~---------~-~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg 152 (534)
+.+ + ...+|+.|+|++|+|++..|..|+.+++|+.|+|++|++++.+|..+. +.+.+.+|||.|.
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc
Confidence 211 0 113789999999999977777889999999999999999987775443 5678899999875
Q ss_pred CC
Q 039819 153 SS 154 (534)
Q Consensus 153 ~~ 154 (534)
..
T Consensus 221 ~~ 222 (272)
T 3rfs_A 221 CP 222 (272)
T ss_dssp TT
T ss_pred Cc
Confidence 43
No 268
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=6.4e-17 Score=150.22 Aligned_cols=125 Identities=23% Similarity=0.296 Sum_probs=107.9
Q ss_pred EEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccccc
Q 039819 11 IGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRK 90 (534)
Q Consensus 11 ~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~~ 90 (534)
+.+++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|..+.
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~---------- 78 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT---------- 78 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCT----------
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCC----------
Confidence 46889999998 6787654 68999999999999 7999999999999999999999988888888887
Q ss_pred cCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceecC
Q 039819 91 CSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICGS 153 (534)
Q Consensus 91 ~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg~ 153 (534)
+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+. +.+.+.+|||.|..
T Consensus 79 ----~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 79 ----QLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp ----TCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ----CCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 888999999999988888999999999999999999965554333 56788999999853
No 269
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.68 E-value=4.4e-17 Score=182.94 Aligned_cols=142 Identities=30% Similarity=0.387 Sum_probs=105.0
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|+++|.+|..|+.+++|++|+|++|+|+|.+|..|+.+++|+.|+|++|+|+|.+|..++....+.....
T Consensus 490 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~ 569 (768)
T 3rgz_A 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCST
T ss_pred CCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhc
Confidence 47899999999999999999999999999999999999999999999999999999999999999987765432211000
Q ss_pred c-----------------------------------------------c---------ccCCccccceeCCCCcCcccCC
Q 039819 88 K-----------------------------------------------R---------KCSGVDQGLLRLNNNSLSGAFP 111 (534)
Q Consensus 88 ~-----------------------------------------------~---------~~~~~~L~~L~L~~N~l~g~~p 111 (534)
. + .....+|+.|+|++|+|+|.+|
T Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip 649 (768)
T 3rgz_A 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 649 (768)
T ss_dssp TCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCC
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCC
Confidence 0 0 0011256667777777777777
Q ss_pred hhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcc
Q 039819 112 VFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPL 149 (534)
Q Consensus 112 ~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~ 149 (534)
..|+.+++|+.|+|++|+|+|.+|..+. +.+++++|.+
T Consensus 650 ~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l 692 (768)
T 3rgz_A 650 KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred HHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcc
Confidence 7777777777777777777776665543 3455566654
No 270
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.67 E-value=2.1e-16 Score=152.87 Aligned_cols=115 Identities=22% Similarity=0.222 Sum_probs=86.3
Q ss_pred CceecCCCcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcc
Q 039819 1 MITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSI 80 (534)
Q Consensus 1 ~v~c~~~~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 80 (534)
|++|.. ..+.+++++++|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..++
T Consensus 9 gC~C~~--~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 83 (251)
T 3m19_A 9 GCTCNE--GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLT 83 (251)
T ss_dssp SSEEEG--GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCT
T ss_pred ceEcCC--CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCC
Confidence 567742 3557999999999 6887776 6999999999999988888899999999999999999988888888887
Q ss_pred cCcccccccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCC
Q 039819 81 WLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPV 134 (534)
Q Consensus 81 ~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~ 134 (534)
+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..
T Consensus 84 --------------~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 123 (251)
T 3m19_A 84 --------------ELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLP 123 (251)
T ss_dssp --------------TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred --------------cCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcC
Confidence 4555555555555444445555555555555555555433
No 271
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.67 E-value=1.9e-16 Score=154.97 Aligned_cols=146 Identities=21% Similarity=0.162 Sum_probs=111.6
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|+...+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..++.|..+..
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 46888889989888655556788888999999988888655566788888888888888888777777777776655433
Q ss_pred ccc---------c-CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceec
Q 039819 88 KRK---------C-SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICG 152 (534)
Q Consensus 88 ~~~---------~-~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg 152 (534)
+.+ + ...+|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+. +.+.+.+|||.|.
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 221 1 113788999999999977777788999999999999999965554332 5678899999885
Q ss_pred C
Q 039819 153 S 153 (534)
Q Consensus 153 ~ 153 (534)
.
T Consensus 221 c 221 (270)
T 2o6q_A 221 C 221 (270)
T ss_dssp S
T ss_pred C
Confidence 4
No 272
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.66 E-value=3e-17 Score=166.80 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=96.5
Q ss_pred CCcCCeeccCCcEEEEEEEECCCcEEEEEEehh----------------------------hhhhcccCceeeEEEEEeC
Q 039819 204 FSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD----------------------------MISLAVHRNLLRLIGYCAT 255 (534)
Q Consensus 204 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~----------------------------~l~~~~h~niv~l~~~~~~ 255 (534)
|++.+.||+|+||.||+|...+|+.||||+++. +.....|+|+++++.....
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 788899999999999999999999999997641 0011236666655432211
Q ss_pred C------CeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCC-----
Q 039819 256 P------TERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFC----- 324 (534)
Q Consensus 256 ~------~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~----- 324 (534)
. ...+|||||++++.|.+.... +....++.|++.+|.|||+. +||||||||.|||+++++
T Consensus 177 vp~p~~~~~~~LVME~i~G~~L~~l~~~------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~d~ 247 (397)
T 4gyi_A 177 VPEPIAQSRHTIVMSLVDALPMRQVSSV------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAEDP 247 (397)
T ss_dssp CCCEEEEETTEEEEECCSCEEGGGCCCC------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSSCT
T ss_pred CCeeeeccCceEEEEecCCccHhhhccc------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCcccc
Confidence 1 123799999999988766532 23356889999999999998 999999999999998776
Q ss_pred -----cEEEEecccceecC
Q 039819 325 -----EAIVGDFGLAKLLD 338 (534)
Q Consensus 325 -----~~kl~DFGla~~~~ 338 (534)
.+.|+||+-+....
T Consensus 248 ~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 248 SSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp TSEEEEEEECCCTTCEETT
T ss_pred cccccceEEEEeCCcccCC
Confidence 38999999877543
No 273
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=3.1e-17 Score=184.59 Aligned_cols=121 Identities=23% Similarity=0.292 Sum_probs=95.9
Q ss_pred CceecCCCcEEEEEecCCCceeecccccccCCCCCEEEc-cCCccCcC--------------------------------
Q 039819 1 MITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLL-QNNNISGG-------------------------------- 47 (534)
Q Consensus 1 ~v~c~~~~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L-~~N~l~g~-------------------------------- 47 (534)
||+|+..++|+.|+|++|+|+|.+|++|++|++|++|+| ++|.|+|.
T Consensus 316 GV~C~~~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~ 395 (876)
T 4ecn_A 316 GVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYD 395 (876)
T ss_dssp TEEECTTSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCC
T ss_pred ceEecCCCCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccC
Confidence 799987789999999999999999999999999999999 88876554
Q ss_pred --------------------------------------------CCCCCCCCCCCCEEEcCCCcCcc-------------
Q 039819 48 --------------------------------------------IPPQLGSLPKLQTLDLSNNRLSG------------- 70 (534)
Q Consensus 48 --------------------------------------------~P~~~~~l~~L~~L~Ls~N~l~g------------- 70 (534)
+|.+|++|++|++|+|++|+|+|
T Consensus 396 ~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n 475 (876)
T 4ecn_A 396 QRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSD 475 (876)
T ss_dssp GGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSH
T ss_pred cchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccc
Confidence 88899999999999999999998
Q ss_pred ----ccCchhh--hcccCcccccccccCCccccceeCCCCcCcccCChhhhcccccccccccCCC-CCC-CCC
Q 039819 71 ----VIPALLF--LSIWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNN-LSG-PVP 135 (534)
Q Consensus 71 ----~~p~~~~--~l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~-l~g-~~p 135 (534)
.+|..++ .++ +|+.|+|++|++.|.+|..|+.+++|+.|+|++|+ |+| .+|
T Consensus 476 ~~~g~iP~~l~f~~L~--------------~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP 534 (876)
T 4ecn_A 476 YAKQYENEELSWSNLK--------------DLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLK 534 (876)
T ss_dssp HHHHHTTSCCCGGGCT--------------TCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHH
T ss_pred cccccCChhhhhccCC--------------CCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccch
Confidence 3888876 777 55555555555555555555555555555555555 554 444
No 274
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.65 E-value=1.2e-16 Score=163.32 Aligned_cols=145 Identities=25% Similarity=0.197 Sum_probs=104.5
Q ss_pred CcEEEEEecCCCceeecccccc-cCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIG-NLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKW 86 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~ 86 (534)
..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+..|..+.
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 3578899999999987777787 899999999999999976777899999999999999999877777777777655543
Q ss_pred ccccc----------CCccccceeCCCCcCcccCChhh---hcccccccccccCCCCCCCCCCCC-------CccccccC
Q 039819 87 DKRKC----------SGVDQGLLRLNNNSLSGAFPVFL---AKISELAFLDLSYNNLSGPVPKFP-------ARTFNVAG 146 (534)
Q Consensus 87 ~~~~~----------~~~~L~~L~L~~N~l~g~~p~~~---~~l~~L~~L~ls~N~l~g~~p~~~-------~~~~~~~~ 146 (534)
.+++. ...+|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++..+..+ .+.+.+.+
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~ 198 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCS
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecC
Confidence 22211 11367788888888874333334 567788888888888884332211 14578889
Q ss_pred Ccceec
Q 039819 147 NPLICG 152 (534)
Q Consensus 147 N~~~cg 152 (534)
|||.|.
T Consensus 199 N~~~C~ 204 (361)
T 2xot_A 199 NPLECD 204 (361)
T ss_dssp SCEECC
T ss_pred CCccCC
Confidence 999884
No 275
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.65 E-value=1.6e-16 Score=150.61 Aligned_cols=114 Identities=18% Similarity=0.221 Sum_probs=106.2
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|++..+.+|+++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+.
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~------- 129 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLS------- 129 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCT-------
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCc-------
Confidence 4799999999999988888999999999999999999977777799999999999999999998898888887
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVP 135 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 135 (534)
+|+.|+|++|+|++..|..|..+++|+.|+|++|.+++..+
T Consensus 130 -------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 130 -------SVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp -------TCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred -------cCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88999999999998889999999999999999999997654
No 276
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.65 E-value=1.9e-16 Score=156.09 Aligned_cols=146 Identities=21% Similarity=0.185 Sum_probs=112.7
Q ss_pred CcEEEEEecCCC-ceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccc
Q 039819 8 NLVIGLGAPSQS-LSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKW 86 (534)
Q Consensus 8 ~~l~~L~l~~n~-l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~ 86 (534)
.+|+.|+|++|+ ++...|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..+..+++|..+.
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 159 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLF 159 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEE
Confidence 468888888887 7765577888888888888888888877777788888888888888888866666677776665543
Q ss_pred cccc---------c-CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCccee
Q 039819 87 DKRK---------C-SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLIC 151 (534)
Q Consensus 87 ~~~~---------~-~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~c 151 (534)
.+++ + ...+|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..+. +.+.+.+|||.|
T Consensus 160 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 160 LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred CCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 2221 1 113788999999999988899999999999999999999975554222 567889999988
Q ss_pred cC
Q 039819 152 GS 153 (534)
Q Consensus 152 g~ 153 (534)
..
T Consensus 240 ~~ 241 (285)
T 1ozn_A 240 DC 241 (285)
T ss_dssp SG
T ss_pred CC
Confidence 53
No 277
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.64 E-value=3.8e-16 Score=164.15 Aligned_cols=133 Identities=20% Similarity=0.161 Sum_probs=120.5
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|++++.+|..|+.+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..++
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~------- 347 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLD------- 347 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCT-------
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcc-------
Confidence 4799999999999999999999999999999999999988898999999999999999999988888888887
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceecCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICGSS 154 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg~~ 154 (534)
+|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+. +.+.+.+||+.|...
T Consensus 348 -------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 348 -------KLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp -------TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred -------cCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 889999999999988899999999999999999999976554433 567899999988643
No 278
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.64 E-value=3.7e-16 Score=155.54 Aligned_cols=130 Identities=19% Similarity=0.231 Sum_probs=88.9
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCc-CCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISG-GIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
+++.|+|++|++++..+..|+++++|++|+|++|.+++ .+|..|..+++|++|+|++|+|++..|..+..++
T Consensus 127 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~------- 199 (306)
T 2z66_A 127 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS------- 199 (306)
T ss_dssp TCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT-------
T ss_pred CCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCC-------
Confidence 45555555555555555555555555555555555554 3555555555555555555555555555555444
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC------ccccccCCcceec
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA------RTFNVAGNPLICG 152 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~------~~~~~~~N~~~cg 152 (534)
+|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..+. +.+.+.+|++.|.
T Consensus 200 -------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 200 -------SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp -------TCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred -------CCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 788999999999977777889999999999999999987775433 4578899999885
No 279
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=3.5e-16 Score=142.90 Aligned_cols=125 Identities=19% Similarity=0.239 Sum_probs=76.1
Q ss_pred EEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccccc
Q 039819 11 IGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRK 90 (534)
Q Consensus 11 ~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~~ 90 (534)
+.|++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..+..+.
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~---------- 76 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLT---------- 76 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT----------
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCC----------
Confidence 45666666666 4554332 5667777777777654444566667777777777777655555555555
Q ss_pred cCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceec
Q 039819 91 CSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICG 152 (534)
Q Consensus 91 ~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg 152 (534)
+|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+. +.+.+.+|++.|.
T Consensus 77 ----~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 77 ----KLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp ----TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ----ccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 566677777777655555566666777777777777644433222 3456666666653
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.64 E-value=3.3e-16 Score=171.13 Aligned_cols=128 Identities=16% Similarity=0.099 Sum_probs=100.3
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|++..|.+|.++++|++|+|++|+|++..|.+|.+|++|++|+|++|+|++..|..|..+.
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~------- 124 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLS------- 124 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCT-------
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCC-------
Confidence 4799999999999987778999999999999999999977777899999999999999999977777888888
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCC-CCCCCC-----ccccccCCcc
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGP-VPKFPA-----RTFNVAGNPL 149 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~-----~~~~~~~N~~ 149 (534)
+|++|+|++|+|++..+..|+.+++|+.|+|++|++++. +|..+. +.+.+.+|.+
T Consensus 125 -------~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 125 -------SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp -------TCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred -------CCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc
Confidence 666677777777655555667777777777777776642 333322 3445555554
No 281
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=5.2e-16 Score=144.02 Aligned_cols=111 Identities=25% Similarity=0.214 Sum_probs=102.3
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|+ .+|..|.++++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..|..|..++
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~------- 102 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLK------- 102 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCT-------
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCC-------
Confidence 47999999999998 7889999999999999999999987778899999999999999999988888888888
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGP 133 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 133 (534)
+|+.|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 103 -------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 103 -------SLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp -------TCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred -------CCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 889999999999966667899999999999999999753
No 282
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=9.8e-16 Score=139.89 Aligned_cols=114 Identities=22% Similarity=0.217 Sum_probs=101.9
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|++..+..|+++++|++|+|++|+|++..|..|..+++|++|+|++|+|++.++..+..++
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~------- 100 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLT------- 100 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-------
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCc-------
Confidence 4799999999999977777889999999999999999966666689999999999999999977777777777
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVP 135 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 135 (534)
+|+.|+|++|+|++..+..|..+++|+.|+|++|.+++..|
T Consensus 101 -------~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 101 -------QLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp -------TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred -------ccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88999999999996666678999999999999999998766
No 283
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.62 E-value=8.8e-16 Score=145.54 Aligned_cols=111 Identities=17% Similarity=0.160 Sum_probs=102.2
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..++
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~------- 128 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLH------- 128 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-------
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCC-------
Confidence 5799999999999998899999999999999999999954445589999999999999999988888888887
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSG 132 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 132 (534)
+|+.|+|++|+|++..+..|..+++|+.|+|++|.++.
T Consensus 129 -------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 129 -------NLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp -------TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred -------CCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 88999999999998888889999999999999999974
No 284
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.62 E-value=9.1e-16 Score=139.34 Aligned_cols=109 Identities=22% Similarity=0.229 Sum_probs=97.6
Q ss_pred EEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccccc
Q 039819 10 VIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKR 89 (534)
Q Consensus 10 l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~ 89 (534)
.+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~--------- 78 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT--------- 78 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT---------
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCC---------
Confidence 457999999999 5887764 8999999999999988888999999999999999999977777777777
Q ss_pred ccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCC
Q 039819 90 KCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVP 135 (534)
Q Consensus 90 ~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 135 (534)
+|+.|+|++|+|++..|..|..+++|+.|+|++|.++...+
T Consensus 79 -----~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 79 -----QLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp -----TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred -----CCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 88999999999997777789999999999999999996654
No 285
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.61 E-value=9.7e-16 Score=167.43 Aligned_cols=132 Identities=19% Similarity=0.231 Sum_probs=120.0
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccC-cCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNIS-GGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKW 86 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~-g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~ 86 (534)
..++.++++.|++++..+..+..++.|+.|+|++|++. +.+|..|..+++|++|||++|+|++.+|..|..++
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~------ 518 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS------ 518 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT------
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCC------
Confidence 46889999999999999999999999999999999854 56888999999999999999999999999999888
Q ss_pred cccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC------ccccccCCcceecC
Q 039819 87 DKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA------RTFNVAGNPLICGS 153 (534)
Q Consensus 87 ~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~------~~~~~~~N~~~cg~ 153 (534)
+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.+|..+. +.+.+++|||.|..
T Consensus 519 --------~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 519 --------SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp --------TCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred --------CCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 899999999999988899999999999999999999998887553 45789999999953
No 286
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=7.4e-16 Score=136.45 Aligned_cols=113 Identities=25% Similarity=0.230 Sum_probs=102.0
Q ss_pred CCcEEEEEecCCCce-eecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccc
Q 039819 7 ENLVIGLGAPSQSLS-GTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRK 85 (534)
Q Consensus 7 ~~~l~~L~l~~n~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~ 85 (534)
..+++.|+|++|+++ +.+|..++.+++|++|+|++|+|++. ..|+.+++|++|+|++|+|++.+|..+..++
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~----- 88 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCP----- 88 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCT-----
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCC-----
Confidence 357999999999999 88999999999999999999999965 7899999999999999999987888887787
Q ss_pred ccccccCCccccceeCCCCcCccc-CChhhhcccccccccccCCCCCCCCC
Q 039819 86 WDKRKCSGVDQGLLRLNNNSLSGA-FPVFLAKISELAFLDLSYNNLSGPVP 135 (534)
Q Consensus 86 ~~~~~~~~~~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~ls~N~l~g~~p 135 (534)
+|+.|+|++|.+++. .|..+..+++|+.|++++|++++..+
T Consensus 89 ---------~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 89 ---------NLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp ---------TCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred ---------CCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 889999999999963 45889999999999999999996543
No 287
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.60 E-value=1.6e-15 Score=154.77 Aligned_cols=108 Identities=21% Similarity=0.155 Sum_probs=79.6
Q ss_pred EEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCC-CCCCCCEEEcCCCcCccccCchhhhcccCccccccc
Q 039819 11 IGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLG-SLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKR 89 (534)
Q Consensus 11 ~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~ 89 (534)
..+++++|+|+ .+|..+. ..|+.|+|++|+|++..+..|. ++++|+.|+|++|+|++..|..|..++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~--------- 88 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVP--------- 88 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCT---------
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCC---------
Confidence 36899999999 5887665 5699999999999977777787 999999999999999988888888888
Q ss_pred ccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCC
Q 039819 90 KCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVP 135 (534)
Q Consensus 90 ~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 135 (534)
+|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|
T Consensus 89 -----~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 129 (361)
T 2xot_A 89 -----NLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDR 129 (361)
T ss_dssp -----TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred -----CCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECH
Confidence 45555555555554444445555555555555555554333
No 288
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.60 E-value=2.8e-15 Score=157.71 Aligned_cols=65 Identities=20% Similarity=0.167 Sum_probs=36.7
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccC
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIP 73 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p 73 (534)
+++.|+|++|+|++..|..|+++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 140 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPS 140 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCT
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccCh
Confidence 45566666666665555555556666666665555555444555555555555555555554333
No 289
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.59 E-value=1.1e-15 Score=166.57 Aligned_cols=131 Identities=19% Similarity=0.218 Sum_probs=89.4
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCc-CCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISG-GIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g-~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
+++.|+|++|++++.+|..|+++++|++|+|++|++++ .+|..|+.+++|++|+|++|+|++.+|..+..++
T Consensus 425 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~------- 497 (606)
T 3vq2_A 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLH------- 497 (606)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT-------
T ss_pred cCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccc-------
Confidence 45555555555555555555555555555555555554 2455555555555555555555555555555444
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC------ccccccCCcceecCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA------RTFNVAGNPLICGSS 154 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~------~~~~~~~N~~~cg~~ 154 (534)
+|+.|+|++|++++.+|..|..+++|+.|+|++|+|+ .+|..+. +.+.+.+|||.|...
T Consensus 498 -------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 498 -------RLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp -------TCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred -------cCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 8899999999999888999999999999999999999 5665432 456889999998543
No 290
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.59 E-value=2.6e-15 Score=136.89 Aligned_cols=108 Identities=20% Similarity=0.224 Sum_probs=95.8
Q ss_pred EEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccccc
Q 039819 11 IGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRK 90 (534)
Q Consensus 11 ~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~~ 90 (534)
+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~---------- 81 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLT---------- 81 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT----------
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcc----------
Confidence 57999999997 7888775 8999999999999988888999999999999999999976666677777
Q ss_pred cCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCC
Q 039819 91 CSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVP 135 (534)
Q Consensus 91 ~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 135 (534)
+|+.|+|++|+|++..+..|..+++|+.|+|++|.++...+
T Consensus 82 ----~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 82 ----QLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp ----TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ----hhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 88999999999996666679999999999999999995443
No 291
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.59 E-value=1.2e-15 Score=153.76 Aligned_cols=115 Identities=19% Similarity=0.197 Sum_probs=79.9
Q ss_pred CcEEEEEecCCCceeeccccccc---------CCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhh
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGN---------LTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFL 78 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~---------l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 78 (534)
.+++.|+|++|++.+.+|..++. +++|++|+|++|+|+ .+|..|+++++|++|+|++|+|++ +|..+..
T Consensus 150 ~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~ 227 (328)
T 4fcg_A 150 NRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHH 227 (328)
T ss_dssp TTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGG
T ss_pred cCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhcc
Confidence 46778888887777777776654 788888888888887 777778888888888888888884 5556666
Q ss_pred cccCcccccccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCC
Q 039819 79 SIWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFP 138 (534)
Q Consensus 79 l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~ 138 (534)
++ +|+.|+|++|.+.+.+|..|+.+++|+.|+|++|++.+.+|..+
T Consensus 228 l~--------------~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~ 273 (328)
T 4fcg_A 228 LP--------------KLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDI 273 (328)
T ss_dssp CT--------------TCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTG
T ss_pred CC--------------CCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhh
Confidence 66 55556666666655666666666666666666666655555443
No 292
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.58 E-value=3.7e-15 Score=139.70 Aligned_cols=115 Identities=20% Similarity=0.214 Sum_probs=102.1
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..+..++
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~------- 124 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLT------- 124 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-------
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCC-------
Confidence 5799999999999976667789999999999999999966666689999999999999999977777777777
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
+|+.|+|++|+|++..+..|..+++|+.|+|++|.+.+..|.
T Consensus 125 -------~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 166 (208)
T 2o6s_A 125 -------QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 166 (208)
T ss_dssp -------TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTT
T ss_pred -------cCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCCC
Confidence 889999999999977777799999999999999999987764
No 293
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.58 E-value=1.1e-15 Score=162.34 Aligned_cols=128 Identities=19% Similarity=0.185 Sum_probs=82.8
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCC-CCCCCCEEEcCCCcCccccCchhhhcccCcccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLG-SLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKW 86 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~ 86 (534)
.+|+.|+|++|+|++..|..|+++++|++|+|++|+|++.+|..|. .+++|++|+|++|.|++..+.. .+
T Consensus 120 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~--~l------- 190 (487)
T 3oja_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQV--VF------- 190 (487)
T ss_dssp SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCC--CC-------
T ss_pred CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccc--cC-------
Confidence 3455555555555554455555555555555555555554444443 4555555555555555432111 12
Q ss_pred cccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceecC
Q 039819 87 DKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICGS 153 (534)
Q Consensus 87 ~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg~ 153 (534)
.+|+.|+|++|.|++ +|..|..+++|+.|+|++|+|++ +|..+. ..+.+.+|++.|+.
T Consensus 191 -------~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 191 -------AKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp -------TTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred -------CCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcc
Confidence 288999999999995 55569999999999999999996 565443 56789999999864
No 294
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.58 E-value=6.4e-15 Score=144.35 Aligned_cols=73 Identities=16% Similarity=0.106 Sum_probs=47.8
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSI 80 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 80 (534)
.+++.|+|++|+|++..+..|+++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..+..++
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 124 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLK 124 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCT
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCC
Confidence 3566777777777765555677777777777777777665556666667777777777766655544555555
No 295
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.57 E-value=2.7e-15 Score=135.69 Aligned_cols=113 Identities=27% Similarity=0.236 Sum_probs=101.0
Q ss_pred CCcEEEEEecCCCce-eecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccc
Q 039819 7 ENLVIGLGAPSQSLS-GTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRK 85 (534)
Q Consensus 7 ~~~l~~L~l~~n~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~ 85 (534)
..+|+.|+|++|+|+ +.+|..|..+++|++|+|++|.|++. ..|..+++|++|+|++|+|++.+|..+..++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~----- 95 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLP----- 95 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCT-----
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCC-----
Confidence 467999999999998 78999999999999999999999964 7899999999999999999988888887788
Q ss_pred ccccccCCccccceeCCCCcCcccC-ChhhhcccccccccccCCCCCCCCC
Q 039819 86 WDKRKCSGVDQGLLRLNNNSLSGAF-PVFLAKISELAFLDLSYNNLSGPVP 135 (534)
Q Consensus 86 ~~~~~~~~~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~ls~N~l~g~~p 135 (534)
+|+.|+|++|.|++.. +..+..+++|+.|++++|.+++..+
T Consensus 96 ---------~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 96 ---------NLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp ---------TCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred ---------CCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 8889999999998532 2789999999999999999996544
No 296
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.57 E-value=5.6e-15 Score=154.87 Aligned_cols=144 Identities=17% Similarity=0.119 Sum_probs=94.6
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCC-ccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNN-NISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKW 86 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N-~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~ 86 (534)
.+|+.|+|++|+|++..+..|.++++|++|+|++| .++...+..|.++++|++|+|++|+|+ .+|. +..+..|..+.
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~~l~~L~~L~ 213 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELD 213 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-CTTCSSCCEEE
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-cCCCcccCEEE
Confidence 46777777777777655556666666666666663 333222234556666666666666655 3342 33333333322
Q ss_pred cccc---------c-CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCccee
Q 039819 87 DKRK---------C-SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLIC 151 (534)
Q Consensus 87 ~~~~---------~-~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~c 151 (534)
.+++ + ...+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+. +.+.+.+|||.|
T Consensus 214 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 214 LSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 1111 0 112789999999999988899999999999999999999966655443 567899999999
Q ss_pred cC
Q 039819 152 GS 153 (534)
Q Consensus 152 g~ 153 (534)
..
T Consensus 294 dC 295 (440)
T 3zyj_A 294 NC 295 (440)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.57 E-value=7.9e-15 Score=144.39 Aligned_cols=128 Identities=22% Similarity=0.183 Sum_probs=105.4
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCc-CccccCchhhhcccCcccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNR-LSGVIPALLFLSIWLPRKW 86 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~l~~~~ 86 (534)
.+++.|+|++|+|++..+..|+++++|++|+|++|+|++..|..|.++++|++|+|++|+ ++...|..+..++
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~------ 105 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLG------ 105 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCT------
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCc------
Confidence 468999999999998777889999999999999999998778899999999999999997 8866678887777
Q ss_pred cccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcc
Q 039819 87 DKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPL 149 (534)
Q Consensus 87 ~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~ 149 (534)
+|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..+. +.+.+.+|.+
T Consensus 106 --------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 165 (285)
T 1ozn_A 106 --------RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 165 (285)
T ss_dssp --------TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred --------CCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcc
Confidence 778888888888877788888888888888888888865554332 4456666654
No 298
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.57 E-value=6.1e-15 Score=140.63 Aligned_cols=114 Identities=20% Similarity=0.111 Sum_probs=102.3
Q ss_pred CCcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccc
Q 039819 7 ENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKW 86 (534)
Q Consensus 7 ~~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~ 86 (534)
..+|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|+ .+|..+..++
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~------ 135 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLT------ 135 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCT------
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCC------
Confidence 357999999999998666677899999999999999999766667899999999999999999 8888888777
Q ss_pred cccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCC
Q 039819 87 DKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVP 135 (534)
Q Consensus 87 ~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 135 (534)
+|+.|+|++|+|++..+..|..+++|+.|+|++|.+++..+
T Consensus 136 --------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 136 --------HLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp --------TCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred --------CCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 88999999999997777889999999999999999997655
No 299
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.57 E-value=6.1e-15 Score=144.49 Aligned_cols=111 Identities=17% Similarity=0.046 Sum_probs=87.7
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~------- 100 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLS------- 100 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCT-------
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCc-------
Confidence 3699999999999987777999999999999999999977777899999999999999999988888888887
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSG 132 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 132 (534)
+|+.|+|++|.+++..+..++.+++|+.|+|++|++++
T Consensus 101 -------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 138 (276)
T 2z62_A 101 -------SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 138 (276)
T ss_dssp -------TCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCC
T ss_pred -------cccEEECCCCCccccCchhcccCCCCCEEECcCCccce
Confidence 45555555555554444455555555555555555553
No 300
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.57 E-value=6.6e-15 Score=144.14 Aligned_cols=129 Identities=19% Similarity=0.171 Sum_probs=104.0
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|+|++..+..|+++++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..|..+..++.|..+..
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 46888888888888777777888888888888888888666666888888888888888888777766777766665543
Q ss_pred ccc-c---------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCC
Q 039819 88 KRK-C---------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 88 ~~~-~---------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
+.+ . ...+|+.|+|++|+|++..|..|..+++|+.|+|++|.+++..|.
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 221 1 113799999999999988888899999999999999999988775
No 301
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.56 E-value=2.5e-15 Score=151.33 Aligned_cols=125 Identities=22% Similarity=0.238 Sum_probs=111.8
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCC---------CCCCCEEEcCCCcCccccCchhhh
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGS---------LPKLQTLDLSNNRLSGVIPALLFL 78 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~---------l~~L~~L~Ls~N~l~g~~p~~~~~ 78 (534)
.+++.|+|++|+|+ .+|..|+++++|++|+|++|++.+.+|..++. +++|++|+|++|+|+ .+|..+..
T Consensus 127 ~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~ 204 (328)
T 4fcg_A 127 AGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIAN 204 (328)
T ss_dssp TTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGG
T ss_pred CCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcC
Confidence 47999999999999 88999999999999999999999999998875 999999999999999 88988888
Q ss_pred cccCcccccccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcc
Q 039819 79 SIWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPL 149 (534)
Q Consensus 79 l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~ 149 (534)
++ +|+.|+|++|+++ .+|..|+.+++|+.|+|++|++.+.+|..+. +.+.+.+|..
T Consensus 205 l~--------------~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 265 (328)
T 4fcg_A 205 LQ--------------NLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSN 265 (328)
T ss_dssp CT--------------TCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTT
T ss_pred CC--------------CCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCc
Confidence 87 8899999999999 5777899999999999999999999997654 4567777654
No 302
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.56 E-value=1e-14 Score=142.52 Aligned_cols=112 Identities=26% Similarity=0.331 Sum_probs=86.3
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|++..+..|+++++|++|+|++|+|+...+..|.++++|++|+|++|+|++..+..+..++
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~------- 109 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLV------- 109 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCS-------
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHccccc-------
Confidence 4689999999999977777999999999999999999955455578999999999999999977777777777
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGP 133 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 133 (534)
+|+.|+|++|++++..|..|..+++|+.|+|++|++++.
T Consensus 110 -------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 148 (270)
T 2o6q_A 110 -------NLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSL 148 (270)
T ss_dssp -------SCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred -------CCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCcc
Confidence 555566666666555555555555666666666655543
No 303
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.55 E-value=1.4e-14 Score=143.27 Aligned_cols=125 Identities=26% Similarity=0.238 Sum_probs=99.1
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|++..|..|.++++|++|+|++|+|++ +|.. +.+++|++|+|++|+|+ .+|..+..++
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~------- 100 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLP------- 100 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCT-------
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCC-------
Confidence 579999999999999888999999999999999999995 5543 88999999999999999 7888777777
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcc
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPL 149 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~ 149 (534)
+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+. +.+.+++|.+
T Consensus 101 -------~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 101 -------ALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp -------TCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred -------CCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 667777777777766666777777777777777777754443322 3455666654
No 304
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.55 E-value=2.9e-15 Score=164.51 Aligned_cols=127 Identities=24% Similarity=0.355 Sum_probs=108.9
Q ss_pred CcEEEEEecCCCceee-----------------cccccc--cCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCc-
Q 039819 8 NLVIGLGAPSQSLSGT-----------------LSGSIG--NLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNR- 67 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~-----------------~p~~~~--~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~- 67 (534)
.+++.|+|++|+|+|. +|..|+ ++++|++|+|++|+++|.+|.+|++|++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 5799999999999986 999999 99999999999999999999999999999999999999
Q ss_pred Ccc-ccCchhhhc------ccCcccccccccCCccccceeCCCCcCcccCCh--hhhcccccccccccCCCCCCCCCCCC
Q 039819 68 LSG-VIPALLFLS------IWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPV--FLAKISELAFLDLSYNNLSGPVPKFP 138 (534)
Q Consensus 68 l~g-~~p~~~~~l------~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L~ls~N~l~g~~p~~~ 138 (534)
|+| .+|..++.+ + +|+.|+|++|+++ .+|. .|+.+++|+.|+|++|+++|.+| .+
T Consensus 286 l~~~~lp~~~~~L~~~~~l~--------------~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~ 349 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGE--------------KIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF 349 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGG--------------TCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC
T ss_pred CccccchHHHHhhhccccCC--------------CCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh
Confidence 999 899988876 5 6777888888888 7777 78888888888888888887777 33
Q ss_pred C-----ccccccCCcce
Q 039819 139 A-----RTFNVAGNPLI 150 (534)
Q Consensus 139 ~-----~~~~~~~N~~~ 150 (534)
. +.+.+.+|.+.
T Consensus 350 ~~l~~L~~L~L~~N~l~ 366 (636)
T 4eco_A 350 GSEIKLASLNLAYNQIT 366 (636)
T ss_dssp EEEEEESEEECCSSEEE
T ss_pred CCCCCCCEEECCCCccc
Confidence 2 45566666554
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.55 E-value=9.2e-15 Score=159.39 Aligned_cols=143 Identities=17% Similarity=0.164 Sum_probs=114.7
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|++..+..|+++++|++|+|++|+|++..|.+|.++++|++|+|++|+|++..|..|..+.+|..+..
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57999999999999888889999999999999999999888889999999999999999999888999988887665533
Q ss_pred ccc-c---------CCccccceeCCCCcCcc-cCChhhhcccccccccccCCCCCCCCCCCCC---------ccccccCC
Q 039819 88 KRK-C---------SGVDQGLLRLNNNSLSG-AFPVFLAKISELAFLDLSYNNLSGPVPKFPA---------RTFNVAGN 147 (534)
Q Consensus 88 ~~~-~---------~~~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~---------~~~~~~~N 147 (534)
+.. . ...+|+.|+|++|.+++ .+|..|+++++|+.|+|++|++++..|..+. ..+.+.+|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 221 1 11367888888888875 5688888888888888888888876665443 14566677
Q ss_pred cce
Q 039819 148 PLI 150 (534)
Q Consensus 148 ~~~ 150 (534)
.+.
T Consensus 192 ~l~ 194 (606)
T 3vq2_A 192 PID 194 (606)
T ss_dssp CCC
T ss_pred Ccc
Confidence 654
No 306
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.54 E-value=1e-14 Score=154.40 Aligned_cols=128 Identities=16% Similarity=0.149 Sum_probs=101.6
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|++..|..|.++++|++|+|++|+|++..|.+|.+|++|++|+|++|+|++..+..|..++
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~------- 104 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLS------- 104 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCT-------
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCC-------
Confidence 4789999999999988889999999999999999999988899999999999999999999966666677777
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcc
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPL 149 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~ 149 (534)
+|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..+. +.+.+.+|.+
T Consensus 105 -------~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 164 (477)
T 2id5_A 105 -------NLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNL 164 (477)
T ss_dssp -------TCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCC
T ss_pred -------CCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcC
Confidence 666777777777766677777777777777777777655544332 3344555543
No 307
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.53 E-value=1.4e-14 Score=157.85 Aligned_cols=111 Identities=22% Similarity=0.063 Sum_probs=92.4
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|++..|.+|+++++|++|+|++|+|++..|.+|.++++|++|+|++|++++..|..|..++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~------- 105 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPK------- 105 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCT-------
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccc-------
Confidence 5799999999999988899999999999999999999988899999999999999999999999899998888
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSG 132 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 132 (534)
+|++|+|++|++++..|..|+.+++|++|+|++|++++
T Consensus 106 -------~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~ 143 (606)
T 3t6q_A 106 -------ALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISS 143 (606)
T ss_dssp -------TCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCC
T ss_pred -------cccEeeccccCcccCCcchhccCCcccEEECCCCcccc
Confidence 55566666666665445556666666666666666654
No 308
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.53 E-value=6.6e-15 Score=158.97 Aligned_cols=109 Identities=25% Similarity=0.218 Sum_probs=100.4
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
.++.|+|++|+|++ +|. |++|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .+..++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~-------- 508 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLP-------- 508 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCS--------
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCC--------
Confidence 57889999999996 776 999999999999999999 899999999999999999999996 67 777777
Q ss_pred cccCCccccceeCCCCcCcccC-ChhhhcccccccccccCCCCCCCCCC
Q 039819 89 RKCSGVDQGLLRLNNNSLSGAF-PVFLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 89 ~~~~~~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
+|+.|+|++|+|++.. |..|+.+++|+.|+|++|+|++.+|.
T Consensus 509 ------~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 509 ------RLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp ------SCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred ------CCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 8899999999999877 99999999999999999999976653
No 309
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.53 E-value=6.7e-15 Score=160.50 Aligned_cols=144 Identities=23% Similarity=0.178 Sum_probs=112.2
Q ss_pred CcEEEEEecCCCceeecccc-cccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccc---cCchhhhcccCc
Q 039819 8 NLVIGLGAPSQSLSGTLSGS-IGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGV---IPALLFLSIWLP 83 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~-~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~---~p~~~~~l~~l~ 83 (534)
.+++.|+|++|++++..|.. |.++++|++|+|++|.+++..|..|..+++|++|+|++|+|++. .+..+..++.|.
T Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 400 PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred ccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 46888899999988776654 88888999999999998887888888888999999999988862 224566666655
Q ss_pred ccccccc---------c-CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCc
Q 039819 84 RKWDKRK---------C-SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNP 148 (534)
Q Consensus 84 ~~~~~~~---------~-~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~ 148 (534)
.+..+.+ + ...+|+.|+|++|++++..|..|..++.| .|+|++|++++.+|..+. +.+.+.+||
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 558 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNP 558 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCC
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCC
Confidence 5432211 1 11378899999999998899999999999 999999999987776433 678899999
Q ss_pred ceec
Q 039819 149 LICG 152 (534)
Q Consensus 149 ~~cg 152 (534)
|.|.
T Consensus 559 ~~c~ 562 (606)
T 3t6q_A 559 LDCT 562 (606)
T ss_dssp EECS
T ss_pred cccc
Confidence 9884
No 310
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.52 E-value=1.6e-14 Score=156.23 Aligned_cols=144 Identities=19% Similarity=0.196 Sum_probs=117.1
Q ss_pred CCcEEEEEecCCCceeecccccccCCCCCEEEccCCccCc--CCCCCCCCCCCCCEEEcCCCcCccccCc-hhhhcccCc
Q 039819 7 ENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISG--GIPPQLGSLPKLQTLDLSNNRLSGVIPA-LLFLSIWLP 83 (534)
Q Consensus 7 ~~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~P~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~l~ 83 (534)
..+++.|+|++|++++.+|..|+++++|++|+|++|+|++ .+|..|.++++|++|+|++|+|++.+|. .+..++.|.
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 4579999999999999899999999999999999999996 3457899999999999999999985665 455666655
Q ss_pred ccccccc-cC-----C--ccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCC-CC-----ccccccCCcc
Q 039819 84 RKWDKRK-CS-----G--VDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKF-PA-----RTFNVAGNPL 149 (534)
Q Consensus 84 ~~~~~~~-~~-----~--~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~-----~~~~~~~N~~ 149 (534)
.+..+++ .. . .+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. +. +.+.+++|||
T Consensus 432 ~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~ 509 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPW 509 (562)
T ss_dssp EEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCB
T ss_pred EEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCc
Confidence 5433221 11 1 38999999999999 88888889999999999999999 45554 32 5678999999
Q ss_pred eec
Q 039819 150 ICG 152 (534)
Q Consensus 150 ~cg 152 (534)
.|.
T Consensus 510 ~c~ 512 (562)
T 3a79_B 510 DCT 512 (562)
T ss_dssp CCC
T ss_pred CCC
Confidence 884
No 311
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.52 E-value=1.4e-14 Score=156.67 Aligned_cols=145 Identities=17% Similarity=0.112 Sum_probs=111.7
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCC-CCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIP-PQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKW 86 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~ 86 (534)
.+++.|+|++|++++..+ .|+.+++|++|+|++|++++..| ..|.++++|++|+|++|++++.+|..+..++.|..+.
T Consensus 373 ~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 373 TSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp SCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred CccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 467888888888885444 48888888888888888886555 4577888888888888888877777777776665543
Q ss_pred cccc-c----------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcce
Q 039819 87 DKRK-C----------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLI 150 (534)
Q Consensus 87 ~~~~-~----------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~ 150 (534)
.++. . ...+|+.|+|++|++++..|..|..+++|+.|+|++|++++.+|..+. +.+.+.+|||.
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 2221 0 113789999999999988899999999999999999999987776543 56788999998
Q ss_pred ecC
Q 039819 151 CGS 153 (534)
Q Consensus 151 cg~ 153 (534)
|..
T Consensus 532 ~~~ 534 (570)
T 2z63_A 532 CSC 534 (570)
T ss_dssp CCT
T ss_pred CCC
Confidence 853
No 312
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.52 E-value=1.3e-14 Score=155.15 Aligned_cols=144 Identities=23% Similarity=0.237 Sum_probs=116.5
Q ss_pred CCcEEEEEecCCCceeecccccccCCCCCEEEccCCccCc--CCCCCCCCCCCCCEEEcCCCcCccccCch-hhhcccCc
Q 039819 7 ENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISG--GIPPQLGSLPKLQTLDLSNNRLSGVIPAL-LFLSIWLP 83 (534)
Q Consensus 7 ~~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g--~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~l~ 83 (534)
..+++.|+|++|++++.+|..|+.+++|++|+|++|+|++ .+|..|+.+++|++|+|++|++++.+|.. +..++.|.
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 3578999999999998889999999999999999999996 56778999999999999999999856654 55555555
Q ss_pred ccccccc-cC-------CccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCC-CC-----ccccccCCcc
Q 039819 84 RKWDKRK-CS-------GVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKF-PA-----RTFNVAGNPL 149 (534)
Q Consensus 84 ~~~~~~~-~~-------~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~-----~~~~~~~N~~ 149 (534)
.+..+++ .. ..+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. +. +.+.+.+|||
T Consensus 403 ~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~ 480 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPW 480 (520)
T ss_dssp EEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCB
T ss_pred EEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCC
Confidence 5432221 11 148999999999999 89998889999999999999999 46653 32 5678999999
Q ss_pred eec
Q 039819 150 ICG 152 (534)
Q Consensus 150 ~cg 152 (534)
.|.
T Consensus 481 ~c~ 483 (520)
T 2z7x_B 481 DCS 483 (520)
T ss_dssp CCC
T ss_pred ccc
Confidence 884
No 313
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.51 E-value=2.1e-14 Score=150.89 Aligned_cols=115 Identities=19% Similarity=0.169 Sum_probs=107.9
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|+|++..|..|+++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..++
T Consensus 299 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~------- 371 (455)
T 3v47_A 299 TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLP------- 371 (455)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCT-------
T ss_pred CCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccc-------
Confidence 5799999999999998899999999999999999999988888999999999999999999988899998888
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
+|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|.
T Consensus 372 -------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 372 -------NLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp -------TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred -------cccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 899999999999977777889999999999999999998885
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.50 E-value=2e-14 Score=143.63 Aligned_cols=142 Identities=18% Similarity=0.083 Sum_probs=84.9
Q ss_pred CcEEEEEecCCCceeeccccc--ccCCCCCEEEccCCccCcCCCCCCCCC-----CCCCEEEcCCCcCccccCchhhhcc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSI--GNLTNLRQVLLQNNNISGGIPPQLGSL-----PKLQTLDLSNNRLSGVIPALLFLSI 80 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~--~~l~~L~~L~L~~N~l~g~~P~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~ 80 (534)
.+++.|+|++|+|++.+|..+ +.+++|++|+|++|+|++. |..|+.+ ++|++|+|++|+|++..|..+..++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 356666666666666666654 6666666666666666644 5555555 6666666666666655556665555
Q ss_pred cCccccccccc--------------CCccccceeCCCCcCcc--cCC-hhhhcccccccccccCCCCCCCCCCC-C----
Q 039819 81 WLPRKWDKRKC--------------SGVDQGLLRLNNNSLSG--AFP-VFLAKISELAFLDLSYNNLSGPVPKF-P---- 138 (534)
Q Consensus 81 ~l~~~~~~~~~--------------~~~~L~~L~L~~N~l~g--~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~-~---- 138 (534)
.|..+..+++. ...+|+.|+|++|+|++ .++ ..+..+++|+.|+|++|++++.+|.. .
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 55444322111 11267778888887772 222 33456677888888888887765421 1
Q ss_pred -CccccccCCcce
Q 039819 139 -ARTFNVAGNPLI 150 (534)
Q Consensus 139 -~~~~~~~~N~~~ 150 (534)
-+.+.+++|.+.
T Consensus 254 ~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 254 QLNSLNLSFTGLK 266 (312)
T ss_dssp TCCEEECTTSCCS
T ss_pred CCCEEECCCCccC
Confidence 145566666653
No 315
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.50 E-value=4.2e-14 Score=154.14 Aligned_cols=124 Identities=15% Similarity=0.053 Sum_probs=62.8
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
+++.|++++|.++...+..|+++++|++|+|++|.|++..|..|+.+++|++|+|++|.|++.+|..|..++.|..+..+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 34555555555554333345555555555555555554444455555555555555555555555445544421111000
Q ss_pred cc---------c-CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCC
Q 039819 89 RK---------C-SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSG 132 (534)
Q Consensus 89 ~~---------~-~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 132 (534)
++ + ...+|+.|+|++|.|++..|..|+.+++|+.|+|++|+|++
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 00 0 00155566666666665555556666666666666666654
No 316
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.50 E-value=4.1e-14 Score=148.84 Aligned_cols=107 Identities=21% Similarity=0.134 Sum_probs=80.7
Q ss_pred EEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccccc
Q 039819 10 VIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKR 89 (534)
Q Consensus 10 l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~ 89 (534)
...++.++++|+ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~--------- 123 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLA--------- 123 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT---------
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcc---------
Confidence 456777888887 5776554 6888888888888877778888888888888888888877777777777
Q ss_pred ccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCC
Q 039819 90 KCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGP 133 (534)
Q Consensus 90 ~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 133 (534)
+|+.|+|++|+|++..+..|..+++|+.|+|++|+++..
T Consensus 124 -----~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 162 (452)
T 3zyi_A 124 -----SLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESI 162 (452)
T ss_dssp -----TCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEE
T ss_pred -----cCCEEECCCCcCCccChhhhcccCCCCEEECCCCCccee
Confidence 667777777777755556677777777777777777743
No 317
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.49 E-value=2.4e-14 Score=142.37 Aligned_cols=125 Identities=19% Similarity=0.122 Sum_probs=89.7
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCC-CCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIP-PQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKW 86 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~ 86 (534)
.+++.|+|++|+++ .+|..|..+++|++|+|++|+|++..+ ..|..+++|++|+|++|.+++.+|..+..++.|..+.
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 57899999999998 578889999999999999999995444 5799999999999999999988888887777444332
Q ss_pred cccc----------c-CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCC
Q 039819 87 DKRK----------C-SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGP 133 (534)
Q Consensus 87 ~~~~----------~-~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 133 (534)
.+++ + ...+|+.|+|++|++++..|..|..+++|+.|+|++|++++.
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 214 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBC
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCcc
Confidence 1110 0 012455666666666655555666666666666666666543
No 318
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.49 E-value=4.9e-14 Score=130.96 Aligned_cols=103 Identities=15% Similarity=0.203 Sum_probs=69.9
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
+++.|+|++|+|+ .+| .+..+++|++|+|++|.++ .++.|..+++|++|+|++|+|++..|..+..++
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~-------- 112 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLT-------- 112 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCT--------
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCC--------
Confidence 5677777777777 555 5777777777777777665 233677777777777777777766666666665
Q ss_pred cccCCccccceeCCCCcCcccCChhhhcccccccccccCCC
Q 039819 89 RKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNN 129 (534)
Q Consensus 89 ~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 129 (534)
+|+.|+|++|++++..|..|+.+++|+.|+|++|+
T Consensus 113 ------~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 113 ------SLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp ------TCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred ------CCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 56666666666666566666666666666666666
No 319
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.49 E-value=7.6e-14 Score=146.23 Aligned_cols=139 Identities=22% Similarity=0.129 Sum_probs=77.2
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
+|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+...+..|..++.|..+...
T Consensus 89 ~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~ 168 (440)
T 3zyj_A 89 HLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG 168 (440)
T ss_dssp SCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCC
Confidence 45566666666665555566666666666666666664334456666666666666666665544455555544443222
Q ss_pred c----------ccC-CccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcc
Q 039819 89 R----------KCS-GVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPL 149 (534)
Q Consensus 89 ~----------~~~-~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~ 149 (534)
. .+. ..+|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++..|..+. +.+.+.+|.+
T Consensus 169 ~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 243 (440)
T 3zyj_A 169 ELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 243 (440)
T ss_dssp CCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCce
Confidence 1 011 125666666666666 444 355666666666666666655444332 3344455543
No 320
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.49 E-value=2.4e-14 Score=158.34 Aligned_cols=145 Identities=22% Similarity=0.169 Sum_probs=96.8
Q ss_pred cEEEEEecCCCce--eecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCc--------hhhh
Q 039819 9 LVIGLGAPSQSLS--GTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPA--------LLFL 78 (534)
Q Consensus 9 ~l~~L~l~~n~l~--g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~--------~~~~ 78 (534)
.++.|+|++|.++ +.+|..|+++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+. .+..
T Consensus 455 ~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~ 534 (680)
T 1ziw_A 455 SLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKG 534 (680)
T ss_dssp TCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTT
T ss_pred ccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcC
Confidence 5667777777765 45666677777777777777777755555567777777777777777643221 1344
Q ss_pred cccCcccccccc---------cC-CccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCC------Cccc
Q 039819 79 SIWLPRKWDKRK---------CS-GVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFP------ARTF 142 (534)
Q Consensus 79 l~~l~~~~~~~~---------~~-~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~------~~~~ 142 (534)
++.|..+..+.+ +. ..+|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..+ .+.+
T Consensus 535 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l 614 (680)
T 1ziw_A 535 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 614 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEE
T ss_pred CCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEE
Confidence 444333221110 11 1278889999999996666778889999999999999997666422 1567
Q ss_pred cccCCcceecC
Q 039819 143 NVAGNPLICGS 153 (534)
Q Consensus 143 ~~~~N~~~cg~ 153 (534)
.+.+|||.|..
T Consensus 615 ~l~~N~~~c~c 625 (680)
T 1ziw_A 615 DMRFNPFDCTC 625 (680)
T ss_dssp ECTTCCCCBCC
T ss_pred EccCCCcccCC
Confidence 89999999964
No 321
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.48 E-value=1.3e-14 Score=161.39 Aligned_cols=113 Identities=25% Similarity=0.367 Sum_probs=95.0
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..|+.|+|++|+|. .+|..+.+|++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|..|+.+.
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~------- 293 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF------- 293 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGT-------
T ss_pred CCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCC-------
Confidence 56888999999988 78888888999999999999998 78888999999999999999998 7788888887
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFP 138 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~ 138 (534)
+|+.|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+
T Consensus 294 -------~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 294 -------QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp -------TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred -------CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 7778888888887 778778888888888888888887766543
No 322
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.48 E-value=1.9e-14 Score=144.12 Aligned_cols=139 Identities=22% Similarity=0.190 Sum_probs=92.7
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhh-hcccCccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLF-LSIWLPRKWD 87 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~l~~~~~ 87 (534)
.++.|+|++|+|++..+.. +++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..|..+. .++.|..+..
T Consensus 100 ~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 100 SIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (317)
T ss_dssp TCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEEC
Confidence 4556666666666544332 45666666666666655555666666666666666666665555443 3444443322
Q ss_pred cccc--------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceec
Q 039819 88 KRKC--------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICG 152 (534)
Q Consensus 88 ~~~~--------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg 152 (534)
+++. ...+|+.|+|++|+|+ .+|..|..+++|+.|+|++|+|+ .+|..+. +.+.+.+|++.|+
T Consensus 177 ~~N~l~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 177 QYNFIYDVKGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp TTSCCCEEECCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CCCcCcccccccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 1111 1238999999999999 56667999999999999999999 4665443 5678999999875
No 323
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.48 E-value=1.9e-14 Score=137.87 Aligned_cols=124 Identities=15% Similarity=0.089 Sum_probs=86.0
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCc-cCcCCCCCCCCCCCCCEEEcCC-CcCccccCchhhhcccCccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNN-ISGGIPPQLGSLPKLQTLDLSN-NRLSGVIPALLFLSIWLPRK 85 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~P~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~l~~~ 85 (534)
..++.|+|++|+|++..+..|+++++|++|+|++|+ |++..|..|.++++|++|+|++ |+|++..|..|..++.|..+
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 479999999999998777789999999999999997 8865566899999999999998 99997777778777744332
Q ss_pred ccccc-c-------CCcccc---ceeCCCC-cCcccCChhhhcccccc-cccccCCCCC
Q 039819 86 WDKRK-C-------SGVDQG---LLRLNNN-SLSGAFPVFLAKISELA-FLDLSYNNLS 131 (534)
Q Consensus 86 ~~~~~-~-------~~~~L~---~L~L~~N-~l~g~~p~~~~~l~~L~-~L~ls~N~l~ 131 (534)
..+++ . ...+|+ .|+|++| .+++..+..|..+++|+ .|++++|+++
T Consensus 111 ~l~~n~l~~lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 111 GIFNTGLKMFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEEECCCSCCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred eCCCCCCccccccccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 21110 0 001233 5555555 55544444455555555 5555555555
No 324
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.48 E-value=2.4e-14 Score=129.41 Aligned_cols=112 Identities=22% Similarity=0.224 Sum_probs=97.7
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccC-chhhhcccCcccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIP-ALLFLSIWLPRKW 86 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~l~~~~ 86 (534)
.+++.|+|++|+|++. ..|+.+++|++|+|++|+|++.+|..+..+++|++|+|++|+|++..+ ..+..++
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~------ 120 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLE------ 120 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCS------
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCC------
Confidence 4799999999999965 789999999999999999997788888889999999999999996432 5666666
Q ss_pred cccccCCccccceeCCCCcCcccCC---hhhhcccccccccccCCCCCCCCCC
Q 039819 87 DKRKCSGVDQGLLRLNNNSLSGAFP---VFLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 87 ~~~~~~~~~L~~L~L~~N~l~g~~p---~~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
+|+.|+|++|.+++..+ ..|..+++|+.|++++|.+. .+|.
T Consensus 121 --------~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 121 --------CLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp --------CCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred --------CCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 88999999999995555 48999999999999999998 4554
No 325
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.48 E-value=4e-14 Score=156.51 Aligned_cols=115 Identities=24% Similarity=0.205 Sum_probs=85.2
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|++..+..|+++++|++|+|++|+|++..|..|++|++|++|+|++|+|++..+..|..+.
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~------- 97 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCT------- 97 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCT-------
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCC-------
Confidence 4789999999999987777899999999999999999988888899999999999999999965555788777
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
+|++|+|++|++++..|..|+.+++|++|+|++|++++..|.
T Consensus 98 -------~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 139 (680)
T 1ziw_A 98 -------NLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLG 139 (680)
T ss_dssp -------TCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCC
T ss_pred -------CCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCch
Confidence 455555555555544444555555555555555555544443
No 326
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.47 E-value=7.7e-14 Score=150.73 Aligned_cols=129 Identities=19% Similarity=0.107 Sum_probs=102.0
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|++..+.+|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+.+|..+..
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999888889999999999999999999877888999999999999999999888888888886655432
Q ss_pred ccc---------c-CCccccceeCCCCcCcc-cCChhhhcccccccccccCCCCCCCCCC
Q 039819 88 KRK---------C-SGVDQGLLRLNNNSLSG-AFPVFLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 88 ~~~---------~-~~~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
... + ...+|+.|+|++|.+++ .+|..|+++++|+.|++++|++++..|.
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~ 167 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGG
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHH
Confidence 211 1 11267777777777765 4677777777777777777777755443
No 327
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.47 E-value=1.1e-13 Score=139.06 Aligned_cols=107 Identities=28% Similarity=0.303 Sum_probs=77.1
Q ss_pred CcEEEEEecCCCcee--ecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccc
Q 039819 8 NLVIGLGAPSQSLSG--TLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRK 85 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~ 85 (534)
.+++.|+|++|.++. ..+..|.++++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++..|..+..++
T Consensus 145 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~----- 216 (330)
T 1xku_A 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLN----- 216 (330)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCT-----
T ss_pred ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCC-----
Confidence 478889999999863 67788899999999999999988 5777665 7888888888888877787777777
Q ss_pred ccccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCC
Q 039819 86 WDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLS 131 (534)
Q Consensus 86 ~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 131 (534)
+|+.|+|++|.+++..|..|..+++|+.|+|++|+++
T Consensus 217 ---------~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 217 ---------NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp ---------TCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred ---------CCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 4455555555555444445555555555555555555
No 328
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.47 E-value=4.6e-14 Score=151.91 Aligned_cols=109 Identities=19% Similarity=0.205 Sum_probs=86.1
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.|+|++|+|++..|.+|+++++|++|+|++|+|++..|.+|+++++|++|+|++|+|++.+|..|..++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~------- 98 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLS------- 98 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCT-------
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCC-------
Confidence 4799999999999988899999999999999999999988888999999999999999999988777788888
Q ss_pred ccccCCccccceeCCCCcCcc-cCChhhhcccccccccccCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSG-AFPVFLAKISELAFLDLSYNNL 130 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l 130 (534)
+|++|+|++|.+++ .+|..|+.+++|+.|++++|++
T Consensus 99 -------~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~ 135 (549)
T 2z81_A 99 -------SLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVET 135 (549)
T ss_dssp -------TCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSS
T ss_pred -------CCcEEECCCCcccccchhhhhhccCCccEEECCCCcc
Confidence 45555555555543 2344455555555555555553
No 329
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.47 E-value=2.2e-14 Score=143.28 Aligned_cols=140 Identities=24% Similarity=0.162 Sum_probs=85.1
Q ss_pred CcEEEEEecCCCceeecccccccC-----CCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccc--cCchh--hh
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNL-----TNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGV--IPALL--FL 78 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l-----~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~--~p~~~--~~ 78 (534)
.+++.|+|++|+|++. |..|+.+ ++|++|+|++|+|++..|..|+++++|++|+|++|++.|. +|..+ ..
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 4567777777777765 6666666 6777777777777765556777777777777777776654 22233 44
Q ss_pred cccCcccccccc-cC------------CccccceeCCCCcCcccCC-hhhhcccccccccccCCCCCCCCCCCCC---cc
Q 039819 79 SIWLPRKWDKRK-CS------------GVDQGLLRLNNNSLSGAFP-VFLAKISELAFLDLSYNNLSGPVPKFPA---RT 141 (534)
Q Consensus 79 l~~l~~~~~~~~-~~------------~~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~---~~ 141 (534)
++.|..+..+++ .. ..+|+.|+|++|+|++..| ..+..+++|+.|+|++|+|+ .+|..+. +.
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~~ 278 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLSV 278 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSEEEE
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCCceE
Confidence 444444332211 11 0266777777777776554 34555677777777777777 5555433 34
Q ss_pred ccccCCcc
Q 039819 142 FNVAGNPL 149 (534)
Q Consensus 142 ~~~~~N~~ 149 (534)
+.+++|.+
T Consensus 279 L~Ls~N~l 286 (312)
T 1wwl_A 279 LDLSYNRL 286 (312)
T ss_dssp EECCSSCC
T ss_pred EECCCCCC
Confidence 45566654
No 330
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.46 E-value=6.5e-14 Score=141.90 Aligned_cols=105 Identities=24% Similarity=0.245 Sum_probs=93.8
Q ss_pred EEEecCC-CceeecccccccCCCCCEEEccC-CccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccccc
Q 039819 12 GLGAPSQ-SLSGTLSGSIGNLTNLRQVLLQN-NNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKR 89 (534)
Q Consensus 12 ~L~l~~n-~l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~ 89 (534)
.++++++ +|+ .+|. |..+++|++|+|++ |+|++..|..|++|++|+.|+|++|+|++.+|..|..++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~--------- 80 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTP--------- 80 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCS---------
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCc---------
Confidence 4588888 999 5888 99999999999996 999977778899999999999999999999999999888
Q ss_pred ccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCC
Q 039819 90 KCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGP 133 (534)
Q Consensus 90 ~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 133 (534)
+|+.|+|++|+|++..|..|..++ |+.|+|++|.|+..
T Consensus 81 -----~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 81 -----RLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp -----CCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred -----CCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 889999999999976666777666 99999999999853
No 331
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.46 E-value=4.9e-14 Score=149.15 Aligned_cols=113 Identities=21% Similarity=0.186 Sum_probs=95.5
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|++..|.+|+++++|++|+|++|+|++..+..|.++++|++|+|++|++++.+|..|..++
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~------- 128 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY------- 128 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCT-------
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccc-------
Confidence 4799999999999998899999999999999999999965555689999999999999999998898888887
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPV 134 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~ 134 (534)
+|+.|+|++|.+++..|..|..+++|+.|+|++|++++..
T Consensus 129 -------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 129 -------NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp -------TCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC
T ss_pred -------cCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC
Confidence 6667777777777666777777777777777777777543
No 332
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.46 E-value=1.3e-13 Score=141.98 Aligned_cols=128 Identities=16% Similarity=0.090 Sum_probs=82.8
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|++++|.++...+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|++++..|..+..++
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~------- 117 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVP------- 117 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-------
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCC-------
Confidence 4577777777777744334467778888888888888766666777788888888888888776666676666
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcc
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPL 149 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~ 149 (534)
+|+.|+|++|+++...+..|..+++|+.|+|++|++++..|..+. +.+.+.+|.+
T Consensus 118 -------~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 177 (390)
T 3o6n_A 118 -------LLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL 177 (390)
T ss_dssp -------TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCC
T ss_pred -------CCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcC
Confidence 556666666666633333346666666666666666654444332 3344555543
No 333
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=1.5e-13 Score=124.58 Aligned_cols=104 Identities=20% Similarity=0.225 Sum_probs=91.4
Q ss_pred CCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccccccCCccccceeCCCCcCcccCCh
Q 039819 33 NLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPV 112 (534)
Q Consensus 33 ~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~ 112 (534)
..+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|..+. +|+.|+|++|+|++..|.
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~--------------~L~~L~Ls~N~l~~l~~~ 72 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLT--------------QLTRLDLDNNQLTVLPAG 72 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCT--------------TCSEEECCSSCCCCCCTT
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcc--------------cCCEEECCCCCcCccChh
Confidence 4579999999999 6998775 7999999999999988898888888 889999999999977777
Q ss_pred hhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceecC
Q 039819 113 FLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICGS 153 (534)
Q Consensus 113 ~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg~ 153 (534)
.|..+++|+.|+|++|+|++..|..+. +.+.+.+|||.|..
T Consensus 73 ~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 73 VFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred hccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 889999999999999999976665443 57789999998864
No 334
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.46 E-value=4.7e-14 Score=158.83 Aligned_cols=131 Identities=22% Similarity=0.239 Sum_probs=102.5
Q ss_pred CcEEEEEecCCCcee-----------------ecccccc--cCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCc-
Q 039819 8 NLVIGLGAPSQSLSG-----------------TLSGSIG--NLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNR- 67 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g-----------------~~p~~~~--~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~- 67 (534)
.+|+.|+|++|+|+| .+|..++ +|++|++|+|++|++.|.+|..|++|++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 579999999999998 4999988 99999999999999999999999999999999999998
Q ss_pred Ccc-ccCchhhhcc-cCcccccccccCCccccceeCCCCcCcccCCh--hhhcccccccccccCCCCCCCCCCCCC----
Q 039819 68 LSG-VIPALLFLSI-WLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPV--FLAKISELAFLDLSYNNLSGPVPKFPA---- 139 (534)
Q Consensus 68 l~g-~~p~~~~~l~-~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L~ls~N~l~g~~p~~~~---- 139 (534)
|+| .+|..++.+. .+. ...+|+.|+|++|+|+ .+|. .|+.+++|+.|+|++|+++ .+| .+.
T Consensus 528 lsg~~iP~~i~~L~~~~~--------~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDED--------TGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp SCHHHHHHHHHHHHHCTT--------TTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred cccccchHHHHhhhhccc--------ccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 999 8998887765 110 0115667777777777 6666 6777777777777777777 566 222
Q ss_pred -ccccccCCcc
Q 039819 140 -RTFNVAGNPL 149 (534)
Q Consensus 140 -~~~~~~~N~~ 149 (534)
+.+.+.+|.+
T Consensus 597 L~~L~Ls~N~l 607 (876)
T 4ecn_A 597 LTDLKLDYNQI 607 (876)
T ss_dssp ESEEECCSSCC
T ss_pred ceEEECcCCcc
Confidence 3455555554
No 335
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.45 E-value=8.7e-14 Score=129.27 Aligned_cols=124 Identities=15% Similarity=0.201 Sum_probs=103.7
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|.++ .++.|..+++|++|+|++|+|++..|..|+.|++|++|+|++|++++..|..+..++
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~------- 136 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLP------- 136 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCS-------
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCC-------
Confidence 47999999999876 345899999999999999999988899999999999999999999988888888887
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCC----CccccccCCcc
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFP----ARTFNVAGNPL 149 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~----~~~~~~~~N~~ 149 (534)
+|+.|+|++|.+.+.+| .+..+++|+.|++++|++++ ++... -+.+.+.+|+.
T Consensus 137 -------~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 137 -------KVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YRGIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp -------SCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CTTGGGCSSCCEEEECBC--
T ss_pred -------CCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hHHhccCCCCCEEEeeCccc
Confidence 88999999998433676 79999999999999999996 33211 14566677764
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.45 E-value=4.9e-14 Score=140.63 Aligned_cols=141 Identities=23% Similarity=0.172 Sum_probs=85.8
Q ss_pred CcEEEEEecCCCceeecc----cccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccc--cC--chhhhc
Q 039819 8 NLVIGLGAPSQSLSGTLS----GSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGV--IP--ALLFLS 79 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p----~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~--~p--~~~~~l 79 (534)
.+++.|+|++|++++..+ ..+..+++|++|+|++|+|++..|..|+++++|++|||++|++.+. ++ ..+..+
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 467888888888887555 3456788888888888888877777888888888888888887652 22 112344
Q ss_pred ccCcccccccc-c------------CCccccceeCCCCcCcccCChhhhcc---cccccccccCCCCCCCCCCCCC---c
Q 039819 80 IWLPRKWDKRK-C------------SGVDQGLLRLNNNSLSGAFPVFLAKI---SELAFLDLSYNNLSGPVPKFPA---R 140 (534)
Q Consensus 80 ~~l~~~~~~~~-~------------~~~~L~~L~L~~N~l~g~~p~~~~~l---~~L~~L~ls~N~l~g~~p~~~~---~ 140 (534)
+.|..+..+++ . ...+|+.|+|++|+|++..|..+..+ ++|+.|+|++|+|+ .+|..+. +
T Consensus 197 ~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~ 275 (310)
T 4glp_A 197 PAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLR 275 (310)
T ss_dssp CCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCS
T ss_pred CCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCC
Confidence 43332221110 0 00255666666666665556555554 46666666666666 4444332 3
Q ss_pred cccccCCcc
Q 039819 141 TFNVAGNPL 149 (534)
Q Consensus 141 ~~~~~~N~~ 149 (534)
.+++++|.+
T Consensus 276 ~L~Ls~N~l 284 (310)
T 4glp_A 276 VLDLSSNRL 284 (310)
T ss_dssp CEECCSCCC
T ss_pred EEECCCCcC
Confidence 445555544
No 337
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.45 E-value=8.9e-14 Score=141.28 Aligned_cols=126 Identities=20% Similarity=0.227 Sum_probs=88.6
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
+++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..+..++
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-------- 124 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLS-------- 124 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCT--------
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCc--------
Confidence 678888888888866666788888888888888888876677788888888888888888854444466666
Q ss_pred cccCCccccceeCCCCcCcccCCh--hhhcccccccccccCCC-CCCCCCCCCC-----ccccccCCcc
Q 039819 89 RKCSGVDQGLLRLNNNSLSGAFPV--FLAKISELAFLDLSYNN-LSGPVPKFPA-----RTFNVAGNPL 149 (534)
Q Consensus 89 ~~~~~~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L~ls~N~-l~g~~p~~~~-----~~~~~~~N~~ 149 (534)
+|+.|+|++|+++ .+|. .|..+++|+.|++++|+ +++..|..+. +.+.+.+|.+
T Consensus 125 ------~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 125 ------SLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp ------TCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred ------cCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 6777777777777 4444 67777777777777774 5433333332 3345555543
No 338
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.45 E-value=1e-13 Score=157.23 Aligned_cols=143 Identities=19% Similarity=0.114 Sum_probs=111.0
Q ss_pred CCcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCC-CCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccc
Q 039819 7 ENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGI-PPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRK 85 (534)
Q Consensus 7 ~~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~-P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~ 85 (534)
..+++.|+|++|+|++..|..|+++++|++|+|++|.+.+.+ |.+|.+|++|++|+|++|+|++..|..|..+.+|..+
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 467999999999999988999999999999999999776666 7789999999999999999998889999888866554
Q ss_pred ccccc-----------c-CCccccceeCCCCcCcccCC-hhhhcccccccccccCCCCCCCCCCCCC-------cccccc
Q 039819 86 WDKRK-----------C-SGVDQGLLRLNNNSLSGAFP-VFLAKISELAFLDLSYNNLSGPVPKFPA-------RTFNVA 145 (534)
Q Consensus 86 ~~~~~-----------~-~~~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~-------~~~~~~ 145 (534)
..+.+ + ...+|+.|+|++|.+++..| ..|+++++|+.|+|++|++++..|..+. +.+.+.
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 32211 1 11367788888888876554 5678888888888888888776665432 345666
Q ss_pred CCcc
Q 039819 146 GNPL 149 (534)
Q Consensus 146 ~N~~ 149 (534)
+|.+
T Consensus 183 ~n~l 186 (844)
T 3j0a_A 183 ANSL 186 (844)
T ss_dssp CSBS
T ss_pred CCcc
Confidence 6655
No 339
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.44 E-value=2e-13 Score=124.34 Aligned_cols=110 Identities=22% Similarity=0.195 Sum_probs=94.5
Q ss_pred CCcEEEEEecCCCceeecccccccCC-CCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccc
Q 039819 7 ENLVIGLGAPSQSLSGTLSGSIGNLT-NLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRK 85 (534)
Q Consensus 7 ~~~l~~L~l~~n~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~ 85 (534)
..+++.|+|++|+|+ .+|. +..+. +|++|+|++|+|++. ..|..+++|++|+|++|+|++..|..+..++
T Consensus 18 ~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~----- 88 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP----- 88 (176)
T ss_dssp TTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT-----
T ss_pred cCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC-----
Confidence 457999999999999 4554 55655 999999999999964 6899999999999999999976666668887
Q ss_pred ccccccCCccccceeCCCCcCcccCCh--hhhcccccccccccCCCCCCCCCC
Q 039819 86 WDKRKCSGVDQGLLRLNNNSLSGAFPV--FLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 86 ~~~~~~~~~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
+|+.|+|++|+|+ .+|. .+..+++|+.|++++|.++ .+|.
T Consensus 89 ---------~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~ 130 (176)
T 1a9n_A 89 ---------DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKH 130 (176)
T ss_dssp ---------TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTT
T ss_pred ---------CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHh
Confidence 8899999999997 6776 8999999999999999998 4443
No 340
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.44 E-value=1.3e-13 Score=150.35 Aligned_cols=107 Identities=18% Similarity=0.153 Sum_probs=69.1
Q ss_pred cCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccccc-c---------CCccccce
Q 039819 30 NLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRK-C---------SGVDQGLL 99 (534)
Q Consensus 30 ~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~~-~---------~~~~L~~L 99 (534)
.+.+|+.|+|++|.++...|..|.++++|++|+|++|.|++..|..|..++.|..+..+.+ . ...+|+.|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 4789999999999999544444788999999999999999888888988884443322110 0 01245555
Q ss_pred eCCCCcCcccCChhhhcccccccccccCCCCCCCCCC
Q 039819 100 RLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 100 ~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
+|++|.|++..|..|+.+++|+.|+|++|++++.+|.
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 165 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD 165 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChh
Confidence 5555555533333345555555555555555544443
No 341
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.44 E-value=3.6e-13 Score=135.53 Aligned_cols=64 Identities=30% Similarity=0.295 Sum_probs=47.9
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccC
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIP 73 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p 73 (534)
.++.|+|++|+|++..|..|+++++|++|+|++|+|++..|.+|+++++|++|+|++|+|+ .+|
T Consensus 55 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~ 118 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIP 118 (332)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCC
T ss_pred CCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccC
Confidence 5777788888877666667777778888888877777666777777777777777777776 444
No 342
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.44 E-value=4.5e-14 Score=124.87 Aligned_cols=105 Identities=21% Similarity=0.240 Sum_probs=93.1
Q ss_pred CCcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccc-cCchhhhcccCccc
Q 039819 7 ENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGV-IPALLFLSIWLPRK 85 (534)
Q Consensus 7 ~~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~l~~~ 85 (534)
..+++.|+|++|+|++. ..|+++++|++|+|++|+|++.+|..+..+++|++|+|++|+|++. .|..+..++
T Consensus 41 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~----- 113 (149)
T 2je0_A 41 FEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLE----- 113 (149)
T ss_dssp CTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCT-----
T ss_pred cCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCC-----
Confidence 35799999999999975 7899999999999999999977898888899999999999999964 347777777
Q ss_pred ccccccCCccccceeCCCCcCcccCC---hhhhcccccccccccC
Q 039819 86 WDKRKCSGVDQGLLRLNNNSLSGAFP---VFLAKISELAFLDLSY 127 (534)
Q Consensus 86 ~~~~~~~~~~L~~L~L~~N~l~g~~p---~~~~~l~~L~~L~ls~ 127 (534)
+|+.|+|++|.+++..+ ..+..+++|+.|++++
T Consensus 114 ---------~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 114 ---------NLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ---------TCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ---------CCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 88999999999996665 5899999999999874
No 343
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=2.6e-13 Score=123.52 Aligned_cols=103 Identities=23% Similarity=0.273 Sum_probs=89.9
Q ss_pred CCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccccccCCccccceeCCCCcCcccCChh
Q 039819 34 LRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVF 113 (534)
Q Consensus 34 L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~ 113 (534)
-+.|++++|+|+ .+|..+. ++|++|+|++|+|++.+|..|..++ +|+.|+|++|+|++..+..
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~--------------~L~~L~Ls~N~l~~i~~~~ 76 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLV--------------NLQQLYFNSNKLTAIPTGV 76 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCT--------------TCCEEECCSSCCCCCCTTT
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCc--------------CCCEEECCCCCCCccChhH
Confidence 478999999998 7998876 7999999999999988898888888 8899999999999766667
Q ss_pred hhcccccccccccCCCCCCCCCCCCC-----ccccccCCcceecC
Q 039819 114 LAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLICGS 153 (534)
Q Consensus 114 ~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~cg~ 153 (534)
|..+++|+.|+|++|+|++..+..+. +.+.+.+|||.|..
T Consensus 77 ~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 77 FDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred hCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 89999999999999999976655343 56789999998854
No 344
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.42 E-value=7.1e-14 Score=142.00 Aligned_cols=126 Identities=18% Similarity=0.164 Sum_probs=102.4
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCC-CCCCCCCCEEEcCCCcCccccC-chhhhcccCccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQ-LGSLPKLQTLDLSNNRLSGVIP-ALLFLSIWLPRK 85 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~-~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~l~~~ 85 (534)
.+++.|+|++|+|++..|..|+++++|++|+|++|+|++ +|.. |+++++|++|+|++|+|++..+ ..+..++
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~----- 149 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLT----- 149 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSS-CCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCT-----
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCc-CCHhHhCCCccCCEEECCCCCCcccCchhhhccCC-----
Confidence 579999999999998888899999999999999999995 5554 9999999999999999995433 3677777
Q ss_pred ccccccCCccccceeCCCC-cCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCc
Q 039819 86 WDKRKCSGVDQGLLRLNNN-SLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNP 148 (534)
Q Consensus 86 ~~~~~~~~~~L~~L~L~~N-~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~ 148 (534)
+|+.|+|++| .+++..|..|+.+++|+.|++++|++++..|..+. +.+.+.+|.
T Consensus 150 ---------~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 150 ---------KLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp ---------TCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSC
T ss_pred ---------CCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCc
Confidence 7888888888 46766677888888888888888888877666554 334455554
No 345
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.42 E-value=3.4e-13 Score=135.70 Aligned_cols=120 Identities=18% Similarity=0.167 Sum_probs=87.2
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
.++.|++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..++.|..+..+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4778999999998 7887774 799999999999997777899999999999999999998889889888855443222
Q ss_pred cc-cC------CccccceeCCCCcCcccCChhhhcccccccccccCCCCC
Q 039819 89 RK-CS------GVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLS 131 (534)
Q Consensus 89 ~~-~~------~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 131 (534)
.+ .. ..+|+.|+|++|++++..+..|..+++|+.|++++|.++
T Consensus 111 ~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~ 160 (332)
T 2ft3_A 111 KNHLVEIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLE 160 (332)
T ss_dssp SSCCCSCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCB
T ss_pred CCcCCccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccc
Confidence 11 10 124555666666665444445556666666666666654
No 346
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.42 E-value=1.4e-13 Score=137.24 Aligned_cols=141 Identities=18% Similarity=0.037 Sum_probs=111.2
Q ss_pred cEEEEEecCCCceeeccccc--ccCCCCCEEEccCCccCcCCC----CCCCCCCCCCEEEcCCCcCccccCchhhhcccC
Q 039819 9 LVIGLGAPSQSLSGTLSGSI--GNLTNLRQVLLQNNNISGGIP----PQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWL 82 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~--~~l~~L~~L~L~~N~l~g~~P----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l 82 (534)
+++.|+|++|++++.+|..+ +.+++|++|+|++|+|++..| ..+..+++|++|+|++|+|++.+|..+..++.|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 59999999999999999998 999999999999999998666 446789999999999999998888888888876
Q ss_pred ccccccccc--------------CCccccceeCCCCcCcccCCh----hhhcccccccccccCCCCCCCCCCCCC-----
Q 039819 83 PRKWDKRKC--------------SGVDQGLLRLNNNSLSGAFPV----FLAKISELAFLDLSYNNLSGPVPKFPA----- 139 (534)
Q Consensus 83 ~~~~~~~~~--------------~~~~L~~L~L~~N~l~g~~p~----~~~~l~~L~~L~ls~N~l~g~~p~~~~----- 139 (534)
..+..+.+. ...+|+.|+|++|+|+ .+|. .++.+++|+.|+|++|+|++..|..+.
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 665432221 1236888999999987 4443 357788999999999999987664332
Q ss_pred ---ccccccCCcce
Q 039819 140 ---RTFNVAGNPLI 150 (534)
Q Consensus 140 ---~~~~~~~N~~~ 150 (534)
+.+++++|.+.
T Consensus 251 ~~L~~L~Ls~N~l~ 264 (310)
T 4glp_A 251 SALNSLNLSFAGLE 264 (310)
T ss_dssp TTCCCEECCSSCCC
T ss_pred CcCCEEECCCCCCC
Confidence 45567777664
No 347
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.42 E-value=2.4e-13 Score=139.94 Aligned_cols=128 Identities=20% Similarity=0.133 Sum_probs=108.3
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|++..+..|+.+++|++|+|++|+|++..|..|+++++|++|+|++|+|+...+..|..++
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~------- 141 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTP------- 141 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-------
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCC-------
Confidence 4799999999999988788999999999999999999987788899999999999999999954444567777
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC--ccccccCCcc
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA--RTFNVAGNPL 149 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~--~~~~~~~N~~ 149 (534)
+|+.|+|++|.+++..|..|..+++|+.|++++|++++.....+. +.+.+.+|..
T Consensus 142 -------~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 142 -------KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp -------TCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCC
T ss_pred -------CCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccc
Confidence 889999999999988888999999999999999999964322222 3455566644
No 348
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.42 E-value=1.2e-13 Score=132.39 Aligned_cols=140 Identities=19% Similarity=0.127 Sum_probs=102.3
Q ss_pred CcEEEEEecCCC-ceeecccccccCCCCCEEEccC-CccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCc--
Q 039819 8 NLVIGLGAPSQS-LSGTLSGSIGNLTNLRQVLLQN-NNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLP-- 83 (534)
Q Consensus 8 ~~l~~L~l~~n~-l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~-- 83 (534)
.+++.|+|++|+ +++..+..|+++++|++|+|++ |+|++..|..|.++++|++|+|++|+|++ +|. +..+..+.
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 478899999997 8866666899999999999998 99986666778899999999999999985 665 66666655
Q ss_pred -ccccccc----------cC-Ccccc-ceeCCCCcCcccCChhhhcccccccccccCCC-CCCCCCCCCC------cccc
Q 039819 84 -RKWDKRK----------CS-GVDQG-LLRLNNNSLSGAFPVFLAKISELAFLDLSYNN-LSGPVPKFPA------RTFN 143 (534)
Q Consensus 84 -~~~~~~~----------~~-~~~L~-~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~------~~~~ 143 (534)
.+..+.+ +. ..+|+ .|+|++|+++ .+|......++|+.|+|++|+ +++..+..+. +.+.
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~ 211 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEE
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEE
Confidence 2221111 11 23788 9999999999 666544344899999999995 9854444332 3456
Q ss_pred ccCCcce
Q 039819 144 VAGNPLI 150 (534)
Q Consensus 144 ~~~N~~~ 150 (534)
+.+|++.
T Consensus 212 l~~N~l~ 218 (239)
T 2xwt_C 212 VSQTSVT 218 (239)
T ss_dssp CTTCCCC
T ss_pred CCCCccc
Confidence 6667653
No 349
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.41 E-value=1.7e-13 Score=145.57 Aligned_cols=121 Identities=22% Similarity=0.221 Sum_probs=87.7
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
+|+.|+|++|+|++..|..|+.+++|++|+|++|.|++..| |+.+++|++|+|++|.|++..+. +.|..+..+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~-----~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG-----PSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC-----TTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC-----CCcCEEECc
Confidence 79999999999998888899999999999999999997665 99999999999999999865432 122222111
Q ss_pred cc-c------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCC
Q 039819 89 RK-C------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 89 ~~-~------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
++ . ...+|+.|+|++|.|++..|..|+.+++|+.|+|++|+|++.+|.
T Consensus 108 ~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (487)
T 3oja_A 108 NNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (487)
T ss_dssp SSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGG
T ss_pred CCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChH
Confidence 10 0 112566666666666666666666666666666666666665443
No 350
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.40 E-value=7.7e-13 Score=132.95 Aligned_cols=126 Identities=21% Similarity=0.253 Sum_probs=102.4
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccC--cCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNIS--GGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRK 85 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~--g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~ 85 (534)
.+++.|+|++|++++..+..|.++++|++|+|++|.++ +..|..|.++++|++|+|++|+++ .+|..+. +
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~----- 192 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--P----- 192 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--T-----
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--c-----
Confidence 46889999999999777778899999999999999996 367788899999999999999998 4565432 2
Q ss_pred ccccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcce
Q 039819 86 WDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLI 150 (534)
Q Consensus 86 ~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~ 150 (534)
+|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..+. +.+.+.+|.+.
T Consensus 193 ---------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 193 ---------SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp ---------TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred ---------cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 788899999999988888999999999999999999876654433 45677777664
No 351
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.40 E-value=2.4e-13 Score=151.19 Aligned_cols=110 Identities=24% Similarity=0.228 Sum_probs=94.0
Q ss_pred ecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccccccCCccccceeCC
Q 039819 23 TLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRKCSGVDQGLLRLN 102 (534)
Q Consensus 23 ~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~~~~~~~L~~L~L~ 102 (534)
..|..|..+++|+.|+|++|+|+ .+|..+++|++|++|+|++|.|+ .+|..|..+. +|+.|+|+
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~--------------~L~~L~Ls 278 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS--------------NLRVLDLS 278 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT--------------TCCEEECT
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC--------------CCCEEeCc
Confidence 44778999999999999999999 89998889999999999999999 8999998888 89999999
Q ss_pred CCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccCCcce
Q 039819 103 NNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAGNPLI 150 (534)
Q Consensus 103 ~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~N~~~ 150 (534)
+|.|+ .+|..|+.|++|+.|+|++|.|+ .+|..+. +.+.+++|++.
T Consensus 279 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 279 HNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp TSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred CCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 99999 88999999999999999999998 7776554 56788888874
No 352
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.40 E-value=3.2e-13 Score=145.94 Aligned_cols=108 Identities=24% Similarity=0.186 Sum_probs=80.8
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|+|++..|.+|+++++|++|+|++|+|++..|.+|.++++|++|||++|+|+ .+|.. .+.
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~------- 121 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMA------- 121 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCT-------
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccc-------
Confidence 45777777777777666667777777777777777777666777777777777777777777 45544 344
Q ss_pred ccccCCccccceeCCCCcCcc-cCChhhhcccccccccccCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSG-AFPVFLAKISELAFLDLSYNNLSG 132 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g 132 (534)
+|+.|+|++|++++ .+|..|+.+++|+.|+|++|++++
T Consensus 122 -------~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 122 -------SLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp -------TCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred -------cCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 78888888888886 456788888888888888888875
No 353
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.40 E-value=1.2e-13 Score=148.77 Aligned_cols=118 Identities=18% Similarity=0.142 Sum_probs=96.1
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCcc-ccCchhhhcccCcccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSG-VIPALLFLSIWLPRKW 86 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~l~~~~ 86 (534)
.+++.|+|++|+|++..|.+|+++++|++|+|++|+|++..|..|+++++|++|+|++|+|++ .+|..+..++
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~------ 123 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLT------ 123 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCT------
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccC------
Confidence 579999999999999888999999999999999999997666679999999999999999996 3567777777
Q ss_pred cccccCCccccceeCCCCcCcccCC-hhhhcccccccccccCCCCCCCCCCCCC
Q 039819 87 DKRKCSGVDQGLLRLNNNSLSGAFP-VFLAKISELAFLDLSYNNLSGPVPKFPA 139 (534)
Q Consensus 87 ~~~~~~~~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~ 139 (534)
+|+.|+|++|.+.+.+| ..|+.+++|+.|++++|++++.+|..+.
T Consensus 124 --------~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 169 (549)
T 2z81_A 124 --------NLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLK 169 (549)
T ss_dssp --------TCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTT
T ss_pred --------CccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhh
Confidence 66777777777444444 5677777777777777777766665543
No 354
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.39 E-value=1.3e-13 Score=147.48 Aligned_cols=108 Identities=24% Similarity=0.255 Sum_probs=92.4
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|+|++..|..|+++++|++|+|++|+|++..|..|+++++|++|||++|+|+ .+|.. .+.
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~------- 90 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTV------- 90 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCC-------
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccC-------
Confidence 46888999999998777788999999999999999998777888999999999999999998 56654 444
Q ss_pred ccccCCccccceeCCCCcCcc-cCChhhhcccccccccccCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSG-AFPVFLAKISELAFLDLSYNNLSG 132 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g 132 (534)
+|++|+|++|++++ .+|..|+.+++|+.|+|++|++++
T Consensus 91 -------~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 91 -------NLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp -------CCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred -------CccEEeccCCccccccchhhhccCCcceEEEecCcccch
Confidence 88899999999987 578999999999999999999875
No 355
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.39 E-value=1.8e-13 Score=124.67 Aligned_cols=104 Identities=21% Similarity=0.239 Sum_probs=91.8
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCC-CCCCCCCCEEEcCCCcCccccCc--hhhhcccCccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQ-LGSLPKLQTLDLSNNRLSGVIPA--LLFLSIWLPRK 85 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~-~~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~l~~~ 85 (534)
+++.|+|++|+|++. +.|+.+++|++|+|++|+|++ +|+. |..+++|++|+|++|+|+ .+|. .+..++
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~----- 113 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLK----- 113 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCT-----
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCC-----
Confidence 799999999999975 689999999999999999995 5554 599999999999999997 6665 666666
Q ss_pred ccccccCCccccceeCCCCcCcccCChh----hhcccccccccccCCCCC
Q 039819 86 WDKRKCSGVDQGLLRLNNNSLSGAFPVF----LAKISELAFLDLSYNNLS 131 (534)
Q Consensus 86 ~~~~~~~~~~L~~L~L~~N~l~g~~p~~----~~~l~~L~~L~ls~N~l~ 131 (534)
+|+.|+|++|.++ .+|.. +..+++|+.||+++|.+.
T Consensus 114 ---------~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 114 ---------SLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ---------TCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ---------CCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 8899999999998 67774 999999999999999875
No 356
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.37 E-value=1.3e-12 Score=127.24 Aligned_cols=135 Identities=24% Similarity=0.369 Sum_probs=81.5
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|+ .+| .++.+++|++|+|++|+|++ +|+ |..+++|++|+|++|+|++ +|.... ..|..+..
T Consensus 41 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEEC
T ss_pred CcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEc
Confidence 35777888888887 455 67778888888888888874 444 7788888888888888874 343221 32222111
Q ss_pred ccc-c-------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC----ccccccCCcceec
Q 039819 88 KRK-C-------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA----RTFNVAGNPLICG 152 (534)
Q Consensus 88 ~~~-~-------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~----~~~~~~~N~~~cg 152 (534)
+++ . ...+|+.|+|++|+|++ +| .+..+++|+.|+|++|++++. +.... +.+.+.+|++.+.
T Consensus 114 ~~N~l~~~~~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 114 DNNELRDTDSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CSSCCSBSGGGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred cCCccCCChhhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 110 0 11256677777777764 33 566677777777777777654 21111 3455666666543
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.35 E-value=1.7e-12 Score=128.28 Aligned_cols=117 Identities=22% Similarity=0.263 Sum_probs=55.6
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
+|+.|++++|+++. ++ .++.+++|++|+|++|+|++ +|+ +.++++|++|+|++|+|++ +|. +..++.|..+..+
T Consensus 47 ~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 47 SIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSLE 120 (291)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEECT
T ss_pred cccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEECC
Confidence 35555666665553 33 35555666666666666653 333 5555566666666665553 222 4444422221110
Q ss_pred cc-c-------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCC
Q 039819 89 RK-C-------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGP 133 (534)
Q Consensus 89 ~~-~-------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 133 (534)
.+ . ...+|+.|+|++|++++. ..+..+++|+.|+|++|++++.
T Consensus 121 ~n~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~ 171 (291)
T 1h6t_A 121 HNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 171 (291)
T ss_dssp TSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCcCCCChhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccc
Confidence 00 0 001455555555555532 3455555555555555555543
No 358
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.35 E-value=1.2e-12 Score=132.60 Aligned_cols=102 Identities=21% Similarity=0.191 Sum_probs=90.2
Q ss_pred CEEEccCC-ccCcCCCCCCCCCCCCCEEEcCC-CcCccccCchhhhcccCcccccccccCCccccceeCCCCcCcccCCh
Q 039819 35 RQVLLQNN-NISGGIPPQLGSLPKLQTLDLSN-NRLSGVIPALLFLSIWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPV 112 (534)
Q Consensus 35 ~~L~L~~N-~l~g~~P~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~ 112 (534)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++.+|..|..+. +|+.|+|++|+|++..|.
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~--------------~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLG--------------ELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCC--------------CCSEEECCSSCCCEECTT
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhcccc--------------CCCEEECCCCccceeCHH
Confidence 35799998 999 6999 99999999999996 999988888888888 899999999999999999
Q ss_pred hhhcccccccccccCCCCCCCCCCCCC----ccccccCCcceec
Q 039819 113 FLAKISELAFLDLSYNNLSGPVPKFPA----RTFNVAGNPLICG 152 (534)
Q Consensus 113 ~~~~l~~L~~L~ls~N~l~g~~p~~~~----~~~~~~~N~~~cg 152 (534)
.|..+++|+.|+|++|+|++.+|..+. +.+.+.+|+|.|.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCCceEEEeeCCCccCC
Confidence 999999999999999999976555432 5678999999885
No 359
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.33 E-value=1.9e-12 Score=146.71 Aligned_cols=127 Identities=22% Similarity=0.201 Sum_probs=108.2
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|.+++..|..|+.+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..++
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~------- 338 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLP------- 338 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCT-------
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCC-------
Confidence 4799999999999998899999999999999999999988899999999999999999999988898888887
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCC-CccccccCCcc
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFP-ARTFNVAGNPL 149 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~~~~~~~N~~ 149 (534)
+|+.|+|++|.+++..|..|..+++|+.|+|++|.+++ ++... .+.+.+.+|.+
T Consensus 339 -------~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~L~~L~l~~N~l 393 (844)
T 3j0a_A 339 -------KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IHFIPSIPDIFLSGNKL 393 (844)
T ss_dssp -------TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CSSCCSCSEEEEESCCC
T ss_pred -------CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-ccCCCCcchhccCCCCc
Confidence 78889999999987777788889999999999999884 33221 13445555544
No 360
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.33 E-value=1.4e-12 Score=130.06 Aligned_cols=136 Identities=21% Similarity=0.268 Sum_probs=91.7
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|+|++ ++ .|..+++|++|+|++|+|++ +|. |..+++|++|+|++|+|++..+ +..++.|..+..
T Consensus 85 ~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEc
Confidence 478899999999985 44 68899999999999999985 554 8899999999999999986544 666664444322
Q ss_pred ccc-c-------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCC---CccccccCCccee
Q 039819 88 KRK-C-------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFP---ARTFNVAGNPLIC 151 (534)
Q Consensus 88 ~~~-~-------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~---~~~~~~~~N~~~c 151 (534)
+++ . ...+|+.|+|++|++++..| +..+++|+.|+|++|++++..|-.. .+.+.+.+|++.+
T Consensus 159 ~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 159 GNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred cCCcCCCChhhcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCeeec
Confidence 111 0 11256677777777764332 6677777777777777775443111 1445666676644
No 361
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.32 E-value=2.3e-12 Score=125.36 Aligned_cols=134 Identities=22% Similarity=0.231 Sum_probs=98.0
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
+++.|+|++|++++. + .+..+++|++|+|++|+|+ .+| .+..+++|+.|+|++|+|++..| +..++.|..+..+
T Consensus 20 ~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 355678899999854 4 6899999999999999999 677 79999999999999999996554 7777766554322
Q ss_pred cc-c------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCC----CccccccCCccee
Q 039819 89 RK-C------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFP----ARTFNVAGNPLIC 151 (534)
Q Consensus 89 ~~-~------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~----~~~~~~~~N~~~c 151 (534)
++ . ...+|+.|+|++|++++ +| .+..+++|+.|+|++|++++. |... -+.+.+++|.+..
T Consensus 94 ~N~l~~l~~~~~~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 94 RNRLKNLNGIPSACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp SSCCSCCTTCCCSSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSCCCB
T ss_pred CCccCCcCccccCcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCcCcc
Confidence 21 1 11467888888888874 33 578888888888888888853 3211 1455666776533
No 362
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.32 E-value=7e-15 Score=136.84 Aligned_cols=127 Identities=23% Similarity=0.296 Sum_probs=106.1
Q ss_pred CCcEEEEEecCCCceeeccc------ccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcc
Q 039819 7 ENLVIGLGAPSQSLSGTLSG------SIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSI 80 (534)
Q Consensus 7 ~~~l~~L~l~~n~l~g~~p~------~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 80 (534)
...++.++|+.++|+|.+|. .|+.+++|++|+|++|+|++ +| .|.++++|++|+|++|+|+ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 35678888899999988887 89999999999999999995 88 8999999999999999999 7888877777
Q ss_pred cCcccccccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCC-CCC-----CccccccCCcceec
Q 039819 81 WLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVP-KFP-----ARTFNVAGNPLICG 152 (534)
Q Consensus 81 ~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p-~~~-----~~~~~~~~N~~~cg 152 (534)
+|+.|+|++|+|++ +| .+..+++|+.|+|++|++++..+ ..+ .+.+.+.+|++.+.
T Consensus 94 --------------~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 94 --------------TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp --------------HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred --------------cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 88899999999995 56 68899999999999999985322 111 15678888887553
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.31 E-value=2.3e-12 Score=127.34 Aligned_cols=135 Identities=24% Similarity=0.290 Sum_probs=104.0
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|++..+ ++++++|++|+|++|+|++ +| .+..+++|++|+|++|+|++ + ..+..++.|..+..
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 578999999999996444 9999999999999999984 55 48999999999999999985 3 35666666665543
Q ss_pred ccc-c-------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC----ccccccCCccee
Q 039819 88 KRK-C-------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA----RTFNVAGNPLIC 151 (534)
Q Consensus 88 ~~~-~-------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~----~~~~~~~N~~~c 151 (534)
+++ . ...+|+.|+|++|++++..| +..+++|+.|+|++|++++ +|.... +.+.+.+|++.+
T Consensus 142 ~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 142 GNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEEEEEEEEEC
T ss_pred cCCcCCcchhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-ChhhccCCCCCEEECcCCcccC
Confidence 322 1 12379999999999996555 9999999999999999995 443211 556778887644
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.30 E-value=5.2e-12 Score=137.18 Aligned_cols=134 Identities=25% Similarity=0.283 Sum_probs=93.6
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|++..| |+.|++|+.|+|++|+|++ +| .|..|++|+.|+|++|+|++ +| .+..++.|..+..
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEEC
Confidence 478899999999986544 8899999999999999984 55 78899999999999999985 33 4666665554432
Q ss_pred ccc-c-------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC----ccccccCCcce
Q 039819 88 KRK-C-------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA----RTFNVAGNPLI 150 (534)
Q Consensus 88 ~~~-~-------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~----~~~~~~~N~~~ 150 (534)
+.+ . ...+|+.|+|++|+|++..| +..+++|+.|+|++|+|++. |.... +.+.+.+|++.
T Consensus 139 s~N~l~~l~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 139 GNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CSSCCCCCGGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEE
T ss_pred CCCccCCchhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCc
Confidence 221 1 11367777777777775555 77777777777777777753 32111 44566666653
No 365
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.30 E-value=4.2e-12 Score=126.45 Aligned_cols=66 Identities=27% Similarity=0.385 Sum_probs=41.2
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSI 80 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 80 (534)
+|+.|++++|+++ .+| .+..+++|++|+|++|+|++ +|. |..+++|++|+|++|+|++ +| .+..++
T Consensus 42 ~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~ 107 (308)
T 1h6u_A 42 GITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQ 107 (308)
T ss_dssp TCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCT
T ss_pred CcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCC
Confidence 4666777777766 344 46667777777777777763 444 6667777777777777664 33 344444
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.30 E-value=2.8e-12 Score=138.38 Aligned_cols=101 Identities=25% Similarity=0.277 Sum_probs=90.3
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCcccc-CchhhhcccCcccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVI-PALLFLSIWLPRKW 86 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~l~~~~ 86 (534)
.+|+.|+|++|+|+ .+|..|++|++|++|+|++|+|++ +| .|++|++|++|+|++|+|++.+ |..+..++
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~------ 533 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCP------ 533 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCT------
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCC------
Confidence 47999999999999 899999999999999999999996 88 8999999999999999999887 99999888
Q ss_pred cccccCCccccceeCCCCcCcccCCh---hhhcccccccccc
Q 039819 87 DKRKCSGVDQGLLRLNNNSLSGAFPV---FLAKISELAFLDL 125 (534)
Q Consensus 87 ~~~~~~~~~L~~L~L~~N~l~g~~p~---~~~~l~~L~~L~l 125 (534)
+|+.|+|++|.|++..|. .+..+++|+.|++
T Consensus 534 --------~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 534 --------RLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp --------TCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred --------CCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 889999999999976553 2445788888864
No 367
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.29 E-value=5.3e-12 Score=126.22 Aligned_cols=111 Identities=24% Similarity=0.230 Sum_probs=75.2
Q ss_pred cEEEEEecCCCceeeccccc-ccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSI-GNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~-~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
+++.|+|++|+|++..+..+ ..+++|++|+|++|+|++ +|. ...+++|++|+|++|+|++ +|..+..++
T Consensus 145 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~------- 214 (317)
T 3o53_A 145 RVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAA------- 214 (317)
T ss_dssp SEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCCEEECCSSCCCE-ECGGGGGGT-------
T ss_pred CCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc-ccccccCCEEECCCCcCCc-chhhhcccC-------
Confidence 45666666666665555544 245666666666666653 232 2236666666666666663 333355554
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCC-CCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLS-GPVPKF 137 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~-g~~p~~ 137 (534)
+|+.|+|++|+|+ .+|..+..+++|+.|+|++|.++ +.+|.+
T Consensus 215 -------~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 257 (317)
T 3o53_A 215 -------GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (317)
T ss_dssp -------TCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHH
T ss_pred -------cccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHH
Confidence 8999999999999 68999999999999999999998 555543
No 368
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.29 E-value=2.7e-12 Score=138.07 Aligned_cols=100 Identities=25% Similarity=0.349 Sum_probs=71.2
Q ss_pred eecCCCcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccC
Q 039819 3 TCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWL 82 (534)
Q Consensus 3 ~c~~~~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l 82 (534)
.|. .++|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +..
T Consensus 55 ~C~-~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~---- 120 (571)
T 3cvr_A 55 ECL-INQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA---- 120 (571)
T ss_dssp HHH-HTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT----
T ss_pred ccc-cCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc----
Confidence 455 4579999999999996 887664 88999999999999 788 457899999999999996 676 432
Q ss_pred cccccccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCC
Q 039819 83 PRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSG 132 (534)
Q Consensus 83 ~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 132 (534)
+|+.|+|++|+|++ +|. .+++|+.|+|++|+|++
T Consensus 121 ------------~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~ 154 (571)
T 3cvr_A 121 ------------SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM 154 (571)
T ss_dssp ------------TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred ------------CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc
Confidence 34455555555553 444 34555555555555553
No 369
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.29 E-value=4.4e-12 Score=128.14 Aligned_cols=135 Identities=21% Similarity=0.215 Sum_probs=76.6
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
.++.|++++|++++..+ +..+++|++|+|++|++++ +|. +..+++|++|+|++|.+++ ++ .+..++.|..+..+
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~ 273 (347)
T 4fmz_A 200 SLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-IN-AVKDLTKLKMLNVG 273 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECC
T ss_pred ccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-Ch-hHhcCCCcCEEEcc
Confidence 45556666666654332 5556666666666666653 333 5556666666666666553 22 23333333222111
Q ss_pred cc-c-------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCC-CC--ccccccCCcc
Q 039819 89 RK-C-------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKF-PA--RTFNVAGNPL 149 (534)
Q Consensus 89 ~~-~-------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~--~~~~~~~N~~ 149 (534)
++ . ...+|+.|+|++|++++..|..|+.+++|+.|+|++|++++..|-. +. +.+.+.+|++
T Consensus 274 ~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 274 SNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVI 345 (347)
T ss_dssp SSCCCCCGGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC--
T ss_pred CCccCCChhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhcc
Confidence 10 0 0126778888888888777788888888888888888888765511 11 4556666654
No 370
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.27 E-value=4.9e-12 Score=136.11 Aligned_cols=98 Identities=29% Similarity=0.394 Sum_probs=70.2
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|++ +|. |.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .++
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~------- 160 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPT------- 160 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCT-------
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCC-------
Confidence 468888888888886 776 665 88888999888885 776 67888888888888885 565 233
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
+|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|.
T Consensus 161 -------~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 161 -------SLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp -------TCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC
T ss_pred -------CcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh
Confidence 55666666666664 555 44 56666666666666 4444
No 371
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.23 E-value=9e-12 Score=135.32 Aligned_cols=119 Identities=25% Similarity=0.254 Sum_probs=79.6
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+|+.|+|++|+|++ +| .|+.|++|+.|+|++|+|++ +| .|..|++|+.|+|++|+|++. ..+..++.|..+..
T Consensus 87 ~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp TTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC
T ss_pred CCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC
Confidence 356677777777764 33 56667777777777777763 33 466666677777777666643 34555555544432
Q ss_pred ccc-c-------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCC
Q 039819 88 KRK-C-------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPV 134 (534)
Q Consensus 88 ~~~-~-------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~ 134 (534)
+.+ . ...+|+.|+|++|+|++ +| .|..+++|+.|+|++|++++..
T Consensus 161 s~N~l~~~~~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 161 EDNQISDIVPLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CSSCCCCCGGGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSEEEECCC
T ss_pred cCCcCCCchhhccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCCcCcCCc
Confidence 211 1 11289999999999995 44 6999999999999999999643
No 372
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.23 E-value=1.1e-11 Score=130.88 Aligned_cols=136 Identities=23% Similarity=0.253 Sum_probs=90.7
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|++++..| ++.+++|++|+|++|+|++ +|. +..+++|+.|+|++|++++..| +..++.|..+..
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN-ISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCc-ccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 468888888888886544 7888888888888888885 444 7788888888888888886544 555554443322
Q ss_pred ccc-c-------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC---ccccccCCccee
Q 039819 88 KRK-C-------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA---RTFNVAGNPLIC 151 (534)
Q Consensus 88 ~~~-~-------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~---~~~~~~~N~~~c 151 (534)
+.+ . ...+|+.|+|++|.+++. ..+..+++|+.|++++|++++.+|-... +.+.+.+|+|..
T Consensus 317 ~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 317 YFNNISDISPVSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CSSCCSCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred cCCcCCCchhhccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 111 1 112677777777777754 4577777777777777777776662111 455667777755
No 373
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.22 E-value=5.6e-14 Score=130.69 Aligned_cols=110 Identities=22% Similarity=0.196 Sum_probs=97.0
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|+|++ +| .|+++++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++ +| .+..++
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~------- 115 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLV------- 115 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHH-------
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCC-------
Confidence 479999999999996 77 9999999999999999999 799888888999999999999996 55 577777
Q ss_pred ccccCCccccceeCCCCcCcccCC-hhhhcccccccccccCCCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFP-VFLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
+|+.|+|++|++++..+ ..+..+++|+.|++++|.+++.+|.
T Consensus 116 -------~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 116 -------NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp -------HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred -------CCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 88999999999994332 4789999999999999999877654
No 374
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.20 E-value=2.2e-12 Score=135.63 Aligned_cols=136 Identities=21% Similarity=0.256 Sum_probs=75.3
Q ss_pred CCcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCC-------------CEEEcCCCcCccc--
Q 039819 7 ENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKL-------------QTLDLSNNRLSGV-- 71 (534)
Q Consensus 7 ~~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L-------------~~L~Ls~N~l~g~-- 71 (534)
...++.|++++|+| |.+|.+|++|++|++|+|++|+++|.+|.+++.+.+| ++|+|++|.|++.
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~ 88 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE 88 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC
Confidence 45789999999999 7999999999999999999999999999999887643 5555555555531
Q ss_pred -----------------cCchhhhcccCccccc-ccccCC-----ccccceeCCCCcCcccCChhhhcccccccccccCC
Q 039819 72 -----------------IPALLFLSIWLPRKWD-KRKCSG-----VDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYN 128 (534)
Q Consensus 72 -----------------~p~~~~~l~~l~~~~~-~~~~~~-----~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N 128 (534)
+|..+. .+..+.. .+.... .+|+.|+|++|++++ +| .|+.+++|++|++++|
T Consensus 89 ~~~~L~~L~l~~n~l~~lp~~~~---~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N 163 (454)
T 1jl5_A 89 LPPHLESLVASCNSLTELPELPQ---SLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNN 163 (454)
T ss_dssp CCTTCSEEECCSSCCSSCCCCCT---TCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSS
T ss_pred CcCCCCEEEccCCcCCccccccC---CCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCC
Confidence 332221 1111111 111111 378889999999885 77 5889999999999999
Q ss_pred CCCCCCCCCCC--ccccccCCcc
Q 039819 129 NLSGPVPKFPA--RTFNVAGNPL 149 (534)
Q Consensus 129 ~l~g~~p~~~~--~~~~~~~N~~ 149 (534)
++++ +|..+. +.+.+.+|.+
T Consensus 164 ~l~~-lp~~~~~L~~L~L~~n~l 185 (454)
T 1jl5_A 164 SLKK-LPDLPPSLEFIAAGNNQL 185 (454)
T ss_dssp CCSC-CCCCCTTCCEEECCSSCC
T ss_pred cCcc-cCCCcccccEEECcCCcC
Confidence 9985 665443 5566667755
No 375
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.20 E-value=4.2e-11 Score=125.84 Aligned_cols=130 Identities=25% Similarity=0.352 Sum_probs=74.4
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
+++.|+|++|+|++ +| +|+++++|++|+|++|+|++ +|..+ .+|++|+|++|++++ +| .+..++.|..+..+
T Consensus 132 ~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 56666666666664 55 46666666666666666663 55433 366666666666664 44 35555544443222
Q ss_pred cc-cCC-----ccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC--ccccccCCcc
Q 039819 89 RK-CSG-----VDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA--RTFNVAGNPL 149 (534)
Q Consensus 89 ~~-~~~-----~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~--~~~~~~~N~~ 149 (534)
++ ..+ .+|+.|+|++|.++ .+|. |+.+++|+.|++++|++++ +|..+. +.+.+++|.+
T Consensus 204 ~N~l~~l~~~~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l 269 (454)
T 1jl5_A 204 NNSLKKLPDLPLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYL 269 (454)
T ss_dssp SSCCSSCCCCCTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCC
T ss_pred CCcCCcCCCCcCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcc
Confidence 11 111 25667777777776 5663 6677777777777777774 443322 3445555543
No 376
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.20 E-value=1.5e-11 Score=124.19 Aligned_cols=116 Identities=22% Similarity=0.271 Sum_probs=75.3
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|++++. +. +..+++|++|+|++|.+++ + +.+..+++|++|+|++|++++. | .+..++.|..+..
T Consensus 221 ~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~L 294 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-S-VLNNLSQLNSLFL 294 (347)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEEC
T ss_pred CcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-h-hhcCCCCCCEEEC
Confidence 3566777777777643 33 6667777777777777763 3 3466666777777777766643 2 3444444444332
Q ss_pred cccc----------CCccccceeCCCCcCcccCChhhhcccccccccccCCCCC
Q 039819 88 KRKC----------SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLS 131 (534)
Q Consensus 88 ~~~~----------~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 131 (534)
+++. ...+|+.|+|++|.+++..| +..+++|+.|++++|.|+
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 2211 11389999999999997666 889999999999999986
No 377
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.18 E-value=4.9e-11 Score=125.46 Aligned_cols=100 Identities=21% Similarity=0.339 Sum_probs=83.3
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|+|++ +| .|+.+++|++|+|++|+|++ +| |+.+++|++|+|++|+|++. | +..++
T Consensus 42 ~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~------- 106 (457)
T 3bz5_A 42 ATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLT------- 106 (457)
T ss_dssp TTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCT-------
T ss_pred CCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCC-------
Confidence 478999999999997 45 79999999999999999996 55 99999999999999999964 4 66666
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSG 132 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 132 (534)
+|+.|+|++|+|++ +| ++.+++|+.|++++|+|++
T Consensus 107 -------~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 107 -------KLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp -------TCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC
T ss_pred -------cCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce
Confidence 67778888888875 44 7777788888888888776
No 378
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.17 E-value=3.7e-11 Score=126.70 Aligned_cols=106 Identities=34% Similarity=0.491 Sum_probs=80.4
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|++++ + +.+..+++|++|+|++|++++..| +..+++|+.|+|++|++++..| +..++
T Consensus 221 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~------- 287 (466)
T 1o6v_A 221 TNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLT------- 287 (466)
T ss_dssp TTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCT-------
T ss_pred CCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCC-------
Confidence 479999999999996 4 478999999999999999996544 9999999999999999996554 66666
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVP 135 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 135 (534)
+|+.|+|++|++++..| +..+++|+.|+|++|++++..|
T Consensus 288 -------~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 288 -------ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp -------TCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG
T ss_pred -------ccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh
Confidence 55566666666664333 5566666666666666665444
No 379
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.16 E-value=2.3e-11 Score=123.34 Aligned_cols=107 Identities=12% Similarity=0.100 Sum_probs=75.0
Q ss_pred EEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCc-hhhhcccCcccccccc
Q 039819 12 GLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPA-LLFLSIWLPRKWDKRK 90 (534)
Q Consensus 12 ~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~l~~~~~~~~ 90 (534)
.++.++|+|+ .+|..| .++|++|+|++|+|+..-+.+|.+|++|++|+|++|++.+.+|. .|..++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~---------- 79 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLP---------- 79 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCT----------
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcch----------
Confidence 3566788887 677665 36788888888888843334688888888888888887666664 444554
Q ss_pred cCCcccc-ceeCCCCcCcccCChhhhcccccccccccCCCCCCCCC
Q 039819 91 CSGVDQG-LLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVP 135 (534)
Q Consensus 91 ~~~~~L~-~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p 135 (534)
+|. .+.+++|+|+...|..|..+++|+.|++++|+|++..+
T Consensus 80 ----~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 80 ----KLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 121 (350)
T ss_dssp ----TCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC
T ss_pred ----hhhhhhcccCCcccccCchhhhhccccccccccccccccCCc
Confidence 332 46667778876667777888888888888888875444
No 380
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.15 E-value=7e-11 Score=124.25 Aligned_cols=104 Identities=18% Similarity=0.225 Sum_probs=80.1
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|+|++|+..+.+ .++.+++|++|+|++|+|++ +| ++.+++|+.|+|++|+|++. + +..++
T Consensus 148 ~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l~~l~------- 212 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--LNQNI------- 212 (457)
T ss_dssp TTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--CTTCT-------
T ss_pred CcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-c--cccCC-------
Confidence 46888888888666666 47888888888888888885 66 78888888888888888864 2 55555
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPK 136 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 136 (534)
+|+.|+|++|+|++ +| ++.+++|+.|++++|+|++..+.
T Consensus 213 -------~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~ 251 (457)
T 3bz5_A 213 -------QLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS 251 (457)
T ss_dssp -------TCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT
T ss_pred -------CCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH
Confidence 77788888888885 56 77788888888888888875443
No 381
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.14 E-value=2.3e-12 Score=132.46 Aligned_cols=128 Identities=21% Similarity=0.217 Sum_probs=82.0
Q ss_pred CcEEEEEecCCCce-eecc---cccccCCCCCEEEccCCccC--c---CCCCCCCCCCCCCEEEcCCCcCc----cccCc
Q 039819 8 NLVIGLGAPSQSLS-GTLS---GSIGNLTNLRQVLLQNNNIS--G---GIPPQLGSLPKLQTLDLSNNRLS----GVIPA 74 (534)
Q Consensus 8 ~~l~~L~l~~n~l~-g~~p---~~~~~l~~L~~L~L~~N~l~--g---~~P~~~~~l~~L~~L~Ls~N~l~----g~~p~ 74 (534)
.+|+.|+|++|+|+ +.+| ..|..+++|++|+|++|+|+ | .+|..+..+++|+.|+|++|.|+ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 46777777777776 3344 45667777777777777776 3 34546777777777777777775 45666
Q ss_pred hhhhcccCcccccccccCCccccceeCCCCcCccc----CChhhhc--ccccccccccCCCCCC----CCCCCC------
Q 039819 75 LLFLSIWLPRKWDKRKCSGVDQGLLRLNNNSLSGA----FPVFLAK--ISELAFLDLSYNNLSG----PVPKFP------ 138 (534)
Q Consensus 75 ~~~~l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~----~p~~~~~--l~~L~~L~ls~N~l~g----~~p~~~------ 138 (534)
.+..++ +|+.|+|++|.|++. +|..+.. +++|+.|+|++|++++ .+|..+
T Consensus 239 ~l~~~~--------------~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~ 304 (386)
T 2ca6_A 239 ALKSWP--------------NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPD 304 (386)
T ss_dssp HGGGCT--------------TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTT
T ss_pred HHccCC--------------CcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCC
Confidence 666555 666777777777654 4555533 6777777777777775 244322
Q ss_pred CccccccCCcc
Q 039819 139 ARTFNVAGNPL 149 (534)
Q Consensus 139 ~~~~~~~~N~~ 149 (534)
.+.+.+.+|++
T Consensus 305 L~~L~l~~N~l 315 (386)
T 2ca6_A 305 LLFLELNGNRF 315 (386)
T ss_dssp CCEEECTTSBS
T ss_pred ceEEEccCCcC
Confidence 14455666655
No 382
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.14 E-value=5.1e-12 Score=129.87 Aligned_cols=114 Identities=24% Similarity=0.323 Sum_probs=98.1
Q ss_pred CcEEEEEecCCCce--e---ecccccccCCCCCEEEccCCccC----cCCCCCCCCCCCCCEEEcCCCcCccc----cCc
Q 039819 8 NLVIGLGAPSQSLS--G---TLSGSIGNLTNLRQVLLQNNNIS----GGIPPQLGSLPKLQTLDLSNNRLSGV----IPA 74 (534)
Q Consensus 8 ~~l~~L~l~~n~l~--g---~~p~~~~~l~~L~~L~L~~N~l~----g~~P~~~~~l~~L~~L~Ls~N~l~g~----~p~ 74 (534)
.+++.|+|++|+|+ | .+|..|..+++|++|+|++|.|+ +.+|..|..+++|+.|+|++|+|++. +|.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 266 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHH
Confidence 47999999999998 3 45558999999999999999996 67899999999999999999999976 455
Q ss_pred hhhh--cccCcccccccccCCccccceeCCCCcCcc----cCChhh-hcccccccccccCCCCCCCCC
Q 039819 75 LLFL--SIWLPRKWDKRKCSGVDQGLLRLNNNSLSG----AFPVFL-AKISELAFLDLSYNNLSGPVP 135 (534)
Q Consensus 75 ~~~~--l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g----~~p~~~-~~l~~L~~L~ls~N~l~g~~p 135 (534)
.+.. ++ +|+.|+|++|.|++ .+|..+ .++++|+.|+|++|++++..|
T Consensus 267 ~l~~~~~~--------------~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 267 AFSKLENI--------------GLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHTCSSC--------------CCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHhhccCC--------------CeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 4432 44 88999999999997 588888 678999999999999997654
No 383
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.10 E-value=3e-10 Score=109.94 Aligned_cols=134 Identities=14% Similarity=0.070 Sum_probs=103.3
Q ss_pred HHHHHHhCCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh--------------hhhhc-ccCceeeEEEEEeCCCeeE
Q 039819 196 ELQQATENFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLA-VHRNLLRLIGYCATPTERL 260 (534)
Q Consensus 196 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~--------------~l~~~-~h~niv~l~~~~~~~~~~~ 260 (534)
.+......|.....++.|+.+.||++... +..+++|+... .+..+ .+..+.++++++......|
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 44556678887778888889999999864 67899998741 33333 2567888999998888899
Q ss_pred EEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 039819 261 LVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC------------------------------------ 304 (534)
Q Consensus 261 lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~------------------------------------ 304 (534)
+||||++|.+|.+.+.. ......++.+++++|..||+..
T Consensus 87 lv~e~i~G~~l~~~~~~-----~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYED-----EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EEEECCSSEEHHHHCCT-----TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEEEecCCeehhhccCC-----cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 99999999998876421 1233578889999999999810
Q ss_pred --------------------CCCeEeccCCCCcEEeCCCCcEEEEecccce
Q 039819 305 --------------------DPKIIHRDVKAANVLLDDFCEAIVGDFGLAK 335 (534)
Q Consensus 305 --------------------~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~ 335 (534)
.+.++|+|++|.|||+++...+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876666799998775
No 384
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.10 E-value=2.7e-11 Score=123.36 Aligned_cols=113 Identities=20% Similarity=0.127 Sum_probs=68.8
Q ss_pred EEecCCCceeecccccccCCCCCEEEccCCccCcCCC----CCCCCCC-CCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 13 LGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIP----PQLGSLP-KLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 13 L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
+.|+.|+++|.+|..+...++|++|+|++|+|++..+ ..|.+++ +|++|+|++|+|++..+..+..+..-.
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~---- 78 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAI---- 78 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTS----
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhcc----
Confidence 5667777777666666655667777777777774444 5566666 677777777777766565555431000
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcc-----cccccccccCCCCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKI-----SELAFLDLSYNNLSGPV 134 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~ls~N~l~g~~ 134 (534)
..+|+.|+|++|++++..+..++.. ++|+.|+|++|++++..
T Consensus 79 -----~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 125 (362)
T 3goz_A 79 -----PANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKS 125 (362)
T ss_dssp -----CTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSC
T ss_pred -----CCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHH
Confidence 0056667777777765555544433 56777777777766443
No 385
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.08 E-value=7.5e-11 Score=119.52 Aligned_cols=113 Identities=18% Similarity=0.172 Sum_probs=95.2
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCC-CCCCCCCCCE-EEcCCCcCccccCchhhhcccCccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPP-QLGSLPKLQT-LDLSNNRLSGVIPALLFLSIWLPRK 85 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~-~~~~l~~L~~-L~Ls~N~l~g~~p~~~~~l~~l~~~ 85 (534)
.+++.|+|++|+|+...+.+|.+|++|++|+|++|++.+.+|. +|.+|++|.. ++++.|+|+...|..|..++
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~----- 104 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLP----- 104 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCT-----
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcc-----
Confidence 4689999999999965556899999999999999999777775 5899999875 77788999988888888888
Q ss_pred ccccccCCccccceeCCCCcCcccCChhhhcccccccccccC-CCCCCCCC
Q 039819 86 WDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSY-NNLSGPVP 135 (534)
Q Consensus 86 ~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~-N~l~g~~p 135 (534)
+|+.|++++|+|++..+..+....++..|++.+ |+++ .+|
T Consensus 105 ---------~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~ 145 (350)
T 4ay9_X 105 ---------NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIE 145 (350)
T ss_dssp ---------TCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EEC
T ss_pred ---------ccccccccccccccCCchhhcccchhhhhhhccccccc-ccc
Confidence 889999999999977777777888888999866 5666 444
No 386
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.05 E-value=2.6e-11 Score=121.79 Aligned_cols=102 Identities=24% Similarity=0.159 Sum_probs=54.0
Q ss_pred cEEEEEecCCCceeecccccccC--CCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccc-cCchhhhcccCccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNL--TNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGV-IPALLFLSIWLPRK 85 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l--~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~l~~~ 85 (534)
.++.|+|++|++. |..+..+ ++|+.|+|++|.+++..|. +..+++|++|+|++|.+++. +|..+..++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~----- 118 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCS----- 118 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBC-----
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCC-----
Confidence 3555666655554 3444544 5566666666666543333 44555666666666655543 555554444
Q ss_pred ccccccCCccccceeCCCCcCcccCChhhhcccccccccccCC
Q 039819 86 WDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYN 128 (534)
Q Consensus 86 ~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N 128 (534)
+|+.|+|++|.+++..|..++.+++|+.|+|++|
T Consensus 119 ---------~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~ 152 (336)
T 2ast_B 119 ---------KLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC 152 (336)
T ss_dssp ---------CCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTC
T ss_pred ---------CCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCC
Confidence 4445555555555445555555555555555555
No 387
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.05 E-value=1.4e-10 Score=126.16 Aligned_cols=113 Identities=27% Similarity=0.377 Sum_probs=55.3
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCC-----------------CCCCCEEEcCCCcCccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGS-----------------LPKLQTLDLSNNRLSGV 71 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~-----------------l~~L~~L~Ls~N~l~g~ 71 (534)
+++.|+|++|+|++ +| ..+++|+.|+|++|+|++ +|..+.+ +++|+.|+|++|+|++
T Consensus 162 ~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~- 235 (622)
T 3g06_A 162 ELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS- 235 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-
T ss_pred CCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-
Confidence 34455555555542 33 234667777777777663 4443211 1345555555555553
Q ss_pred cCchhhhcccCcccccccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC-----ccccccC
Q 039819 72 IPALLFLSIWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA-----RTFNVAG 146 (534)
Q Consensus 72 ~p~~~~~l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-----~~~~~~~ 146 (534)
+|..+ + +|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+. +.+++.+
T Consensus 236 lp~~l---~--------------~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~ 293 (622)
T 3g06_A 236 LPVLP---S--------------ELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 293 (622)
T ss_dssp CCCCC---T--------------TCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCS
T ss_pred CCCCC---C--------------cCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecC
Confidence 33211 1 4555555555555 3444 3455555555555555 4443322 3344555
Q ss_pred Ccc
Q 039819 147 NPL 149 (534)
Q Consensus 147 N~~ 149 (534)
|++
T Consensus 294 N~l 296 (622)
T 3g06_A 294 NPL 296 (622)
T ss_dssp CCC
T ss_pred CCC
Confidence 554
No 388
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.05 E-value=1.9e-11 Score=122.77 Aligned_cols=110 Identities=25% Similarity=0.251 Sum_probs=80.9
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcC-CCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGG-IPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKW 86 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~ 86 (534)
.+++.|++++|.+++.++. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..+..++
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~------ 142 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNS------ 142 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCT------
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCC------
Confidence 4677888888888876554 55688888888888888765 777788888888888888888877777777666
Q ss_pred cccccCCccccceeCCCC-cCcc-cCChhhhcccccccccccCC-CCCC
Q 039819 87 DKRKCSGVDQGLLRLNNN-SLSG-AFPVFLAKISELAFLDLSYN-NLSG 132 (534)
Q Consensus 87 ~~~~~~~~~L~~L~L~~N-~l~g-~~p~~~~~l~~L~~L~ls~N-~l~g 132 (534)
+|+.|+|++| .+++ .+|..+..+++|+.|+|++| ++++
T Consensus 143 --------~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 143 --------NLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp --------TCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH
T ss_pred --------CCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh
Confidence 6666777776 5654 25566666667777777766 6653
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.04 E-value=3.3e-11 Score=122.76 Aligned_cols=115 Identities=20% Similarity=0.177 Sum_probs=92.1
Q ss_pred CcEEEEEecCCCceeecc----cccccCC-CCCEEEccCCccCcCCCCCCCCC-----CCCCEEEcCCCcCccccCchhh
Q 039819 8 NLVIGLGAPSQSLSGTLS----GSIGNLT-NLRQVLLQNNNISGGIPPQLGSL-----PKLQTLDLSNNRLSGVIPALLF 77 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p----~~~~~l~-~L~~L~L~~N~l~g~~P~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~ 77 (534)
..++.|+|++|+|++..+ ..|.+++ +|++|+|++|+|++..+..|..+ ++|++|+|++|+|++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 459999999999997666 7788898 99999999999998777777775 9999999999999987777665
Q ss_pred hc-ccCcccccccccCCccccceeCCCCcCcccCChhhhc-----ccccccccccCCCCCC
Q 039819 78 LS-IWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLAK-----ISELAFLDLSYNNLSG 132 (534)
Q Consensus 78 ~l-~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~-----l~~L~~L~ls~N~l~g 132 (534)
.. .... .+|+.|+|++|+|++..+..++. ..+|+.|+|++|+++.
T Consensus 102 ~~l~~~~----------~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 102 KTLAAIP----------FTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp HHHHTSC----------TTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCC----------CCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 43 1110 17888999999998666655544 2589999999998884
No 390
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.03 E-value=4.6e-10 Score=108.09 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=87.7
Q ss_pred ccCCcEEEEEEEECCCcEEEEEEehh-----------hhhhcccCc--eeeEEEEEeCCCeeEEEeeccCCCChhhhccc
Q 039819 211 GAGGFGNVYKGKLGDGTVLAVKRLKD-----------MISLAVHRN--LLRLIGYCATPTERLLVYPYMSNGSVASRLRE 277 (534)
Q Consensus 211 G~G~~g~Vy~~~~~~~~~vavK~~~~-----------~l~~~~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 277 (534)
+.|..+.||++...+|..+++|.... .+..+.+.+ +.+++++....+..++||||++|.+|. ...
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~~ 106 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SSH 106 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TSC
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cCc
Confidence 45566999999887788899997542 344444434 456888888877889999999998884 211
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------------
Q 039819 278 KPALDWNTRKRIAIGAARGLLYLHEQC----------------------------------------------------- 304 (534)
Q Consensus 278 ~~~l~~~~~~~i~~~i~~~l~yLH~~~----------------------------------------------------- 304 (534)
.+ ...++.++++.|..||+..
T Consensus 107 ---~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 180 (264)
T 1nd4_A 107 ---LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPD 180 (264)
T ss_dssp ---CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCS
T ss_pred ---CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCC
Confidence 12 2367788888888888742
Q ss_pred --CCCeEeccCCCCcEEeCCCCcEEEEeccccee
Q 039819 305 --DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336 (534)
Q Consensus 305 --~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~ 336 (534)
...++|+|++|.|||++++..+.|+|||.+..
T Consensus 181 ~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 181 GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp SCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998876677999998753
No 391
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.02 E-value=2.9e-10 Score=123.71 Aligned_cols=126 Identities=25% Similarity=0.339 Sum_probs=80.8
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
.+++.|++++|+|+ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|.. +++|..+..
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~~---l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCCC---CTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCCC---CCCCCEEEC
Confidence 35788888888888 7787665 78888888888888 5776 5678888888888888 45653 232222211
Q ss_pred cc-cc-----CCccccceeCCCCcCcccCChhhhcccccccccccCCCCCCCCCCCCC--ccccccCCcc
Q 039819 88 KR-KC-----SGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLSGPVPKFPA--RTFNVAGNPL 149 (534)
Q Consensus 88 ~~-~~-----~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~--~~~~~~~N~~ 149 (534)
+. .. ...+|+.|+|++|+|+ .+|.. +++|+.|+|++|++++ +|..+. ..+.+.+|.+
T Consensus 109 s~N~l~~l~~~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l 173 (622)
T 3g06_A 109 FSNPLTHLPALPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQL 173 (622)
T ss_dssp CSCCCCCCCCCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCC
T ss_pred cCCcCCCCCCCCCCcCEEECCCCCCC-cCCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCC
Confidence 11 11 1125677777777777 35553 3677777777777774 343332 3344555544
No 392
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.85 E-value=1.2e-08 Score=103.57 Aligned_cols=128 Identities=14% Similarity=0.183 Sum_probs=97.4
Q ss_pred cCCeeccCCcEEEEEEEECCCcEEEEEEeh--h---------------hhhhcc--cCceeeEEEEEeCC---CeeEEEe
Q 039819 206 SKNILGAGGFGNVYKGKLGDGTVLAVKRLK--D---------------MISLAV--HRNLLRLIGYCATP---TERLLVY 263 (534)
Q Consensus 206 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~---------------~l~~~~--h~niv~l~~~~~~~---~~~~lv~ 263 (534)
..+.|+.|.++.||+....+ ..+++|+.. . ++..+. +..+.+++.++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 34678999999999998765 467777664 1 333443 45678889988776 3479999
Q ss_pred eccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 039819 264 PYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQC--------------------------------------- 304 (534)
Q Consensus 264 e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~--------------------------------------- 304 (534)
||++|..+.+... ..++...+..++.++++.|+.||+..
T Consensus 121 e~v~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (359)
T 3dxp_A 121 EFVSGRVLWDQSL--PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD 198 (359)
T ss_dssp ECCCCBCCCCTTC--TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred EecCCeecCCCcc--ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence 9999988754222 24778889999999999999999731
Q ss_pred ----------------CCCeEeccCCCCcEEeCCCCc--EEEEeccccee
Q 039819 305 ----------------DPKIIHRDVKAANVLLDDFCE--AIVGDFGLAKL 336 (534)
Q Consensus 305 ----------------~~~ivH~Dlkp~NiLl~~~~~--~kl~DFGla~~ 336 (534)
.+.++|+|+++.|||++.++. +.|.||+.+..
T Consensus 199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997653 68999998875
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.83 E-value=2.3e-10 Score=119.95 Aligned_cols=110 Identities=18% Similarity=0.086 Sum_probs=74.9
Q ss_pred CcEEEEEecCCCceee----cccccccCCCCCEEEccCCccCcCCCCCCC-----CCCCCCEEEcCCCcCccc----cCc
Q 039819 8 NLVIGLGAPSQSLSGT----LSGSIGNLTNLRQVLLQNNNISGGIPPQLG-----SLPKLQTLDLSNNRLSGV----IPA 74 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~-----~l~~L~~L~Ls~N~l~g~----~p~ 74 (534)
.+++.|+|++|+|+.. ++..+..+++|++|+|++|.|++..+..+. ..++|+.|+|++|.|++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 5799999999999865 677888899999999999998754333332 236899999999998865 455
Q ss_pred hhhhcccCcccccccccCCccccceeCCCCcCcccCChhhhc-----ccccccccccCCCCC
Q 039819 75 LLFLSIWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLAK-----ISELAFLDLSYNNLS 131 (534)
Q Consensus 75 ~~~~l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~-----l~~L~~L~ls~N~l~ 131 (534)
.+..++ +|+.|+|++|.+++..+..+.. .++|+.|+|++|+++
T Consensus 336 ~l~~~~--------------~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 336 VLAQNR--------------FLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHHHCS--------------SCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHhhCC--------------CccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 555556 5555666666555443433332 345556666666555
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.83 E-value=7.3e-11 Score=123.86 Aligned_cols=133 Identities=22% Similarity=0.200 Sum_probs=100.7
Q ss_pred CcEEEEEecCCCceeec-----ccccccCCCCCEEEccCCccCcC----CCCCCCCCCCCCEEEcCCCcCccccCchhhh
Q 039819 8 NLVIGLGAPSQSLSGTL-----SGSIGNLTNLRQVLLQNNNISGG----IPPQLGSLPKLQTLDLSNNRLSGVIPALLFL 78 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~-----p~~~~~l~~L~~L~L~~N~l~g~----~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 78 (534)
.+++.|+|++|+|++.- +..+..+++|++|+|++|+|+.. +|..+..+++|++|+|++|.|++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 57999999999998643 22334689999999999999953 7888888999999999999998765555544
Q ss_pred cccCcccccccccCCccccceeCCCCcCccc----CChhhhcccccccccccCCCCCCCCCCC----------CCccccc
Q 039819 79 SIWLPRKWDKRKCSGVDQGLLRLNNNSLSGA----FPVFLAKISELAFLDLSYNNLSGPVPKF----------PARTFNV 144 (534)
Q Consensus 79 l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~g~~p~~----------~~~~~~~ 144 (534)
...- ...+|+.|+|++|.+++. +|..+..+++|+.|+|++|++++..+.. --+.+.+
T Consensus 307 ~l~~---------~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 377 (461)
T 1z7x_W 307 TLLE---------PGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWL 377 (461)
T ss_dssp HHTS---------TTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred Hhcc---------CCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEEC
Confidence 3100 001789999999999865 6778888999999999999998542211 1245677
Q ss_pred cCCcc
Q 039819 145 AGNPL 149 (534)
Q Consensus 145 ~~N~~ 149 (534)
.+|.+
T Consensus 378 ~~n~i 382 (461)
T 1z7x_W 378 ADCDV 382 (461)
T ss_dssp TTSCC
T ss_pred CCCCC
Confidence 77755
No 395
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.74 E-value=2.1e-09 Score=103.92 Aligned_cols=98 Identities=26% Similarity=0.239 Sum_probs=71.3
Q ss_pred EEecCCCce---eecccccccCCCCCEEEccCCccCc--CCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 13 LGAPSQSLS---GTLSGSIGNLTNLRQVLLQNNNISG--GIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 13 L~l~~n~l~---g~~p~~~~~l~~L~~L~L~~N~l~g--~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
++++.|+.. +.++-...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+..
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~------ 219 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKG------ 219 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTT------
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhccc------
Confidence 455666433 2222233568899999999999997 5567777899999999999999954 33333331
Q ss_pred ccccCCccccceeCCCCcCcccCCh-------hhhccccccccc
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPV-------FLAKISELAFLD 124 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~-------~~~~l~~L~~L~ 124 (534)
.+|+.|+|++|.+++.+|. .+..+++|+.||
T Consensus 220 ------l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 220 ------LKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ------SCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred ------CCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 1688899999999887773 467888888887
No 396
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.73 E-value=7.8e-09 Score=102.38 Aligned_cols=174 Identities=18% Similarity=0.172 Sum_probs=111.3
Q ss_pred CCeeccCCcEEEEEEEECCCcEEEEEEehh------------hhhhc-ccCc--eeeEEEEEeCCC---eeEEEeeccCC
Q 039819 207 KNILGAGGFGNVYKGKLGDGTVLAVKRLKD------------MISLA-VHRN--LLRLIGYCATPT---ERLLVYPYMSN 268 (534)
Q Consensus 207 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~------------~l~~~-~h~n--iv~l~~~~~~~~---~~~lv~e~~~~ 268 (534)
.+.++.|.+..||+.. ..+++|.... .+..+ .+.. +.+++.+..... ..|+||||++|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 4678999999999864 3477886531 34343 2222 344555443333 34899999999
Q ss_pred CChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------------
Q 039819 269 GSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQ--------------------------------------------- 303 (534)
Q Consensus 269 gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~--------------------------------------------- 303 (534)
.++.+... ..++..++..++.++++.++.||+.
T Consensus 101 ~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (304)
T 3sg8_A 101 VPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYR 178 (304)
T ss_dssp EECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred eECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHH
Confidence 88865432 2467788888999999999999861
Q ss_pred ----------CCCCeEeccCCCCcEEeCC--CCcEEEEecccceecCCCCCceeec-------------ccccccccc-c
Q 039819 304 ----------CDPKIIHRDVKAANVLLDD--FCEAIVGDFGLAKLLDHSDSHVTTA-------------VRGTVGHIA-P 357 (534)
Q Consensus 304 ----------~~~~ivH~Dlkp~NiLl~~--~~~~kl~DFGla~~~~~~~~~~~~~-------------~~gt~~y~a-P 357 (534)
..+.++|+|++|.||++++ ...+.|+||+.+............. .....++.. |
T Consensus 179 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~ 258 (304)
T 3sg8_A 179 DILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIP 258 (304)
T ss_dssp HHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHH
T ss_pred HHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcH
Confidence 1135899999999999998 5567899999987543210000000 000011112 2
Q ss_pred cccccCCCCcchhHHHHHHHHHHHHhCCCCc
Q 039819 358 EYLSTGQSSEKTDVFGFGILLLELITGMRAL 388 (534)
Q Consensus 358 E~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~ 388 (534)
+.... .....+.|++|.++|.+.+|..+|
T Consensus 259 ~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 259 TVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 22211 122368999999999999998776
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.71 E-value=1.8e-09 Score=110.33 Aligned_cols=128 Identities=20% Similarity=0.165 Sum_probs=88.4
Q ss_pred CcEEEEEecCCCceeeccccc-ccCCCCCEEEccCCccCcCCCCCC-----CCCCCCCEEEcCCCcCccc----cCchhh
Q 039819 8 NLVIGLGAPSQSLSGTLSGSI-GNLTNLRQVLLQNNNISGGIPPQL-----GSLPKLQTLDLSNNRLSGV----IPALLF 77 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~-~~l~~L~~L~L~~N~l~g~~P~~~-----~~l~~L~~L~Ls~N~l~g~----~p~~~~ 77 (534)
..|+.|+|++|+|+..-...+ ..+++|+.|+|++|+|+..-...+ ...++|++|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 479999999999975544443 346789999999999974333333 3467899999999999743 223333
Q ss_pred hcccCcccccccccCCccccceeCCCCcCcc----cCChhhhcccccccccccCCCCCCC----CCCC-----CCccccc
Q 039819 78 LSIWLPRKWDKRKCSGVDQGLLRLNNNSLSG----AFPVFLAKISELAFLDLSYNNLSGP----VPKF-----PARTFNV 144 (534)
Q Consensus 78 ~l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~ls~N~l~g~----~p~~-----~~~~~~~ 144 (534)
..+ +|+.|+|++|.|+. .++..+...++|+.|+|++|.|+.. ++.. --+.+++
T Consensus 181 ~~~--------------~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~L 246 (372)
T 3un9_A 181 GNT--------------SVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHL 246 (372)
T ss_dssp TCS--------------SCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEEC
T ss_pred cCC--------------CcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEec
Confidence 344 78888999988864 3456677778888899998888732 1110 1256677
Q ss_pred cCCcc
Q 039819 145 AGNPL 149 (534)
Q Consensus 145 ~~N~~ 149 (534)
++|++
T Consensus 247 s~N~i 251 (372)
T 3un9_A 247 YFNEL 251 (372)
T ss_dssp TTSSC
T ss_pred cCCCC
Confidence 77765
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.58 E-value=5.2e-09 Score=106.79 Aligned_cols=116 Identities=18% Similarity=0.115 Sum_probs=84.8
Q ss_pred CcEEEEEecCCCceeecccccccC-----CCCCEEEccCCccCcCCCCCC-CCCCCCCEEEcCCCcCccccCchhhhccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNL-----TNLRQVLLQNNNISGGIPPQL-GSLPKLQTLDLSNNRLSGVIPALLFLSIW 81 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l-----~~L~~L~L~~N~l~g~~P~~~-~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 81 (534)
..++.|+|++|+|+......|..+ ++|++|+|++|.|+..-...+ ..+++|+.|+|++|+|+..-...+.....
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 468899999999986555555444 799999999999975333333 34678999999999998554444432210
Q ss_pred CcccccccccCCccccceeCCCCcCcc----cCChhhhcccccccccccCCCCCC
Q 039819 82 LPRKWDKRKCSGVDQGLLRLNNNSLSG----AFPVFLAKISELAFLDLSYNNLSG 132 (534)
Q Consensus 82 l~~~~~~~~~~~~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~ls~N~l~g 132 (534)
- ...+|+.|+|++|.|+. .++..+..+++|+.|+|++|.|+.
T Consensus 152 ~---------~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 152 H---------DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp S---------TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHH
T ss_pred h---------cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCc
Confidence 0 00178999999999964 356667888999999999999873
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.52 E-value=1.1e-07 Score=95.20 Aligned_cols=100 Identities=8% Similarity=0.040 Sum_probs=50.1
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCC-EEEcCCCcCccccCchhhhcccCccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQ-TLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
+++.|+|++|+++...+.+|.++++|+.|+|.+| ++..-+.+|.+|.+|+ .|+|.+ +++..-+.+|..+.
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~------- 297 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCD------- 297 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCT-------
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCc-------
Confidence 4555555555555333344555555555555555 4433333455555555 555555 44433334444444
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhccccccccc
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLD 124 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 124 (534)
+|+.|+|++|+++..-+.+|.++++|+.++
T Consensus 298 -------~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 298 -------NLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp -------TEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred -------cCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 455555555555534444555555555543
No 400
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=4.4e-07 Score=90.71 Aligned_cols=37 Identities=5% Similarity=0.074 Sum_probs=28.2
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccC
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNIS 45 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~ 45 (534)
.+|+.|+|++ +++.+-+.+|.++++|+.|+|++|.++
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~ 137 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP 137 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc
Confidence 3788888888 888555667888888888888888764
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.42 E-value=1.2e-07 Score=91.60 Aligned_cols=65 Identities=22% Similarity=0.306 Sum_probs=55.5
Q ss_pred CcEEEEEecCCCcee--ecccccccCCCCCEEEccCCccCcCCCCCCCCCC--CCCEEEcCCCcCccccCc
Q 039819 8 NLVIGLGAPSQSLSG--TLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLP--KLQTLDLSNNRLSGVIPA 74 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~--~L~~L~Ls~N~l~g~~p~ 74 (534)
.+|+.|+|++|+|++ .+|..++.+++|+.|+|++|+|++. .++..+. +|++|+|++|.|++.+|.
T Consensus 170 ~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 170 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRD 238 (267)
T ss_dssp TTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSS
T ss_pred CCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCc
Confidence 479999999999998 4567889999999999999999964 3344444 999999999999988873
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.42 E-value=2.3e-08 Score=91.50 Aligned_cols=110 Identities=13% Similarity=0.130 Sum_probs=72.6
Q ss_pred CcEEEEEecCC-Cceee----cccccccCCCCCEEEccCCccCc----CCCCCCCCCCCCCEEEcCCCcCcccc----Cc
Q 039819 8 NLVIGLGAPSQ-SLSGT----LSGSIGNLTNLRQVLLQNNNISG----GIPPQLGSLPKLQTLDLSNNRLSGVI----PA 74 (534)
Q Consensus 8 ~~l~~L~l~~n-~l~g~----~p~~~~~l~~L~~L~L~~N~l~g----~~P~~~~~l~~L~~L~Ls~N~l~g~~----p~ 74 (534)
..++.|+|++| +|... +...+...++|++|+|++|+|+. .+...+...++|++|+|++|.|+..- ..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 46788888888 77643 34556667788888888888863 24444555677888888888887431 12
Q ss_pred hhhhcccCcccccccccCCccccceeC--CCCcCccc----CChhhhcccccccccccCCCCC
Q 039819 75 LLFLSIWLPRKWDKRKCSGVDQGLLRL--NNNSLSGA----FPVFLAKISELAFLDLSYNNLS 131 (534)
Q Consensus 75 ~~~~l~~l~~~~~~~~~~~~~L~~L~L--~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~ 131 (534)
.+.... .|+.|+| ++|.|... +...+...++|+.|+|++|.+.
T Consensus 116 ~L~~n~--------------~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNT--------------SLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCS--------------SCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCC--------------CceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 222222 6778888 77888643 3445556677888888888764
No 403
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.37 E-value=1.8e-06 Score=85.93 Aligned_cols=125 Identities=18% Similarity=0.186 Sum_probs=90.9
Q ss_pred CCCcCCeeccCCcEEEEEEEECCCcEEEEEEehh------------hhhhccc----CceeeEEEEEeCCCeeEEEeecc
Q 039819 203 NFSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD------------MISLAVH----RNLLRLIGYCATPTERLLVYPYM 266 (534)
Q Consensus 203 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~------------~l~~~~h----~niv~l~~~~~~~~~~~lv~e~~ 266 (534)
.....+.++.|....||+. +..+++|.... .+..+.+ ..+.+++++ +..++||||+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i 109 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYI 109 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeec
Confidence 5566778999999999998 55678886531 3344444 223445554 5678999999
Q ss_pred CCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 039819 267 SNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCD----------------------------------------- 305 (534)
Q Consensus 267 ~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~----------------------------------------- 305 (534)
+|.++..... ..++..++..++.++++.++.||+...
T Consensus 110 ~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (320)
T 3r70_A 110 KGERITYEQY--HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLE 187 (320)
T ss_dssp CCBCCCHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred CCcccccccc--ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchH
Confidence 9988864332 235677778888888888888885422
Q ss_pred -------------------CCeEeccCCCCcEEeCCCCcEEEEecccceec
Q 039819 306 -------------------PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337 (534)
Q Consensus 306 -------------------~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~ 337 (534)
+.++|+|++|.|||++.+..+.|.||+.+...
T Consensus 188 ~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 188 HIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999999666799999998654
No 404
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.34 E-value=3.3e-08 Score=106.99 Aligned_cols=110 Identities=17% Similarity=0.097 Sum_probs=67.5
Q ss_pred CcEEEEEecCCCceeeccccccc-CCCCCEEEcc----CCccCcC-----CCCCCCCCCCCCEEEcCCC--cCccccCch
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGN-LTNLRQVLLQ----NNNISGG-----IPPQLGSLPKLQTLDLSNN--RLSGVIPAL 75 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~-l~~L~~L~L~----~N~l~g~-----~P~~~~~l~~L~~L~Ls~N--~l~g~~p~~ 75 (534)
.+++.|+|+.|++++..+..++. +++|+.|+|+ .|++++. ++..+.++++|+.|+|+++ .+++..+..
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 36778888888888777777765 7888888885 6777742 3333556777777877643 355554444
Q ss_pred hhh-cccCcccccccccCCccccceeCCCCcCcc-cCChhhhcccccccccccCCCCC
Q 039819 76 LFL-SIWLPRKWDKRKCSGVDQGLLRLNNNSLSG-AFPVFLAKISELAFLDLSYNNLS 131 (534)
Q Consensus 76 ~~~-l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~ 131 (534)
+.. ++ +|+.|+|++|++++ .++..+..+++|+.|+|++|.++
T Consensus 458 ~~~~~~--------------~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 458 IGQYSP--------------NVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp HHHSCT--------------TCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred HHHhCc--------------cceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 432 33 45556666665554 33444455555666666666554
No 405
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.27 E-value=1.8e-07 Score=101.21 Aligned_cols=121 Identities=13% Similarity=0.081 Sum_probs=60.7
Q ss_pred cEEEEEecCCCceee----cccccccCCCCCEEEccCCccC----cCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcc
Q 039819 9 LVIGLGAPSQSLSGT----LSGSIGNLTNLRQVLLQNNNIS----GGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSI 80 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~----~p~~~~~l~~L~~L~L~~N~l~----g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 80 (534)
+++.|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.++++|+.|+|++|.+.+ +|..+..++
T Consensus 165 ~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~ 243 (592)
T 3ogk_B 165 KIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAA 243 (592)
T ss_dssp TCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCT
T ss_pred CCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhh
Confidence 455666666655544 3334445566666666666665 2233334455666666666666663 445555554
Q ss_pred cCcccccccc-------------cCCccccceeCCCCcCcccCChhhhcccccccccccCCCCC
Q 039819 81 WLPRKWDKRK-------------CSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLS 131 (534)
Q Consensus 81 ~l~~~~~~~~-------------~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 131 (534)
.|..+..... ....+|+.|+++++.. +.+|..+..+++|+.|+|++|.++
T Consensus 244 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~ 306 (592)
T 3ogk_B 244 NLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLE 306 (592)
T ss_dssp TCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCC
T ss_pred HHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCC
Confidence 4333221100 0001444455554322 245555556666666666666554
No 406
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.06 E-value=2.2e-05 Score=76.90 Aligned_cols=62 Identities=21% Similarity=0.241 Sum_probs=48.2
Q ss_pred cCCeeccCCcEEEEEEEECCCcEEEEEEeh--------------hhhhhcccC---ceeeEEEEEeCCCeeEEEeeccCC
Q 039819 206 SKNILGAGGFGNVYKGKLGDGTVLAVKRLK--------------DMISLAVHR---NLLRLIGYCATPTERLLVYPYMSN 268 (534)
Q Consensus 206 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--------------~~l~~~~h~---niv~l~~~~~~~~~~~lv~e~~~~ 268 (534)
..+.|+.|.++.||++...+|..++||+.. ..+..+.+. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 356799999999999999999999999842 145555554 577777763 36999999999
Q ss_pred CCh
Q 039819 269 GSV 271 (534)
Q Consensus 269 gsL 271 (534)
+.+
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.04 E-value=1.4e-06 Score=88.33 Aligned_cols=113 Identities=15% Similarity=0.135 Sum_probs=60.4
Q ss_pred CcEEEEEecCCC-ceeecccccccCCCCCEEEccCCccCcCCCCCCC--CCCCCCEEEcCC--CcCcccc-Cchhhhccc
Q 039819 8 NLVIGLGAPSQS-LSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLG--SLPKLQTLDLSN--NRLSGVI-PALLFLSIW 81 (534)
Q Consensus 8 ~~l~~L~l~~n~-l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~--~l~~L~~L~Ls~--N~l~g~~-p~~~~~l~~ 81 (534)
.+|+.|+|++|. ++ ++. +. +++|+.|+|..+.|+...-..+. .+++|+.|+|+. |...|.. ...+..+
T Consensus 172 P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~-- 245 (362)
T 2ra8_A 172 PLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPL-- 245 (362)
T ss_dssp TTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGG--
T ss_pred CCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHH--
Confidence 468888887763 32 333 43 77888888877776532222232 577788887753 2221110 0011100
Q ss_pred CcccccccccCCccccceeCCCCcCcccCChhhh---cccccccccccCCCCCC
Q 039819 82 LPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLA---KISELAFLDLSYNNLSG 132 (534)
Q Consensus 82 l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~---~l~~L~~L~ls~N~l~g 132 (534)
+... ...+|+.|+|++|.+....+..+. .+++|+.|+|+.|.|+.
T Consensus 246 ----l~~~--~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 246 ----FSKD--RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp ----SCTT--TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred ----HhcC--CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 0000 012677777777777644443443 35677777777777664
No 408
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.98 E-value=4.5e-07 Score=97.99 Aligned_cols=109 Identities=13% Similarity=0.050 Sum_probs=80.5
Q ss_pred CcEEEEEecCCCceeecccccc-cCCCCCEEEcc--C----CccCcCCCC------CCCCCCCCCEEEcCCCcCccccCc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIG-NLTNLRQVLLQ--N----NNISGGIPP------QLGSLPKLQTLDLSNNRLSGVIPA 74 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~-~l~~L~~L~L~--~----N~l~g~~P~------~~~~l~~L~~L~Ls~N~l~g~~p~ 74 (534)
.+++.|.+..|++++.....+. .+++|+.|+|+ + |+++ ..|. .+.++++|+.|+|++ .+++..+.
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~-~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT-LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT-CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc-CCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 3688888999999887777776 58999999999 4 6676 2332 256788999999977 67665555
Q ss_pred hhhh-cccCcccccccccCCccccceeCCCCcCcccCChhh-hcccccccccccCCCCCC
Q 039819 75 LLFL-SIWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFL-AKISELAFLDLSYNNLSG 132 (534)
Q Consensus 75 ~~~~-l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~ls~N~l~g 132 (534)
.+.. ++ +|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++
T Consensus 450 ~l~~~~~--------------~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 450 YIGTYAK--------------KMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp HHHHHCT--------------TCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred HHHHhch--------------hccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 5544 44 77888888888876555555 668888888888888853
No 409
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.96 E-value=2.8e-05 Score=78.78 Aligned_cols=132 Identities=12% Similarity=0.085 Sum_probs=80.1
Q ss_pred CcCCeeccCCcEEEEEEEECCCcEEEEEEehh---------hhhhcccC--ceeeEEEEEeCC-CeeEEEeeccCCCChh
Q 039819 205 SSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD---------MISLAVHR--NLLRLIGYCATP-TERLLVYPYMSNGSVA 272 (534)
Q Consensus 205 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~---------~l~~~~h~--niv~l~~~~~~~-~~~~lv~e~~~~gsL~ 272 (534)
...+.++.|....||+... ++..+++|.... .+..+... .+.+++.++... ...++||||++|..+.
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l~ 122 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQ 122 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCCHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEETT
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCchhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCcc
Confidence 3456788999999999986 577888887642 33444332 245677777654 5679999999986654
Q ss_pred hh------------------cccCC-----C------------CCHHHHH---------------------HHHHHHHHH
Q 039819 273 SR------------------LREKP-----A------------LDWNTRK---------------------RIAIGAARG 296 (534)
Q Consensus 273 ~~------------------l~~~~-----~------------l~~~~~~---------------------~i~~~i~~~ 296 (534)
+. ++... . -.|.... .....+...
T Consensus 123 ~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 202 (362)
T 3ovc_A 123 DLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDEL 202 (362)
T ss_dssp TSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHH
Confidence 21 00000 0 0111110 111112222
Q ss_pred HHHHHhc-CCCCeEeccCCCCcEEeCCCCcEEEEecccceec
Q 039819 297 LLYLHEQ-CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337 (534)
Q Consensus 297 l~yLH~~-~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~ 337 (534)
+.++... ..+.++|+|+.+.|||++....+.|+||+.+..-
T Consensus 203 ~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 203 MLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 2233211 1146899999999999988777889999988754
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.94 E-value=1.4e-06 Score=79.46 Aligned_cols=97 Identities=21% Similarity=0.210 Sum_probs=74.2
Q ss_pred eecccccccCCCCCEEEccCC-ccCc----CCCCCCCCCCCCCEEEcCCCcCccccC----chhhhcccCcccccccccC
Q 039819 22 GTLSGSIGNLTNLRQVLLQNN-NISG----GIPPQLGSLPKLQTLDLSNNRLSGVIP----ALLFLSIWLPRKWDKRKCS 92 (534)
Q Consensus 22 g~~p~~~~~l~~L~~L~L~~N-~l~g----~~P~~~~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~l~~~~~~~~~~ 92 (534)
..+...+...+.|++|+|++| .|+. .+...+...++|++|+|++|+|...-. ..+....
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~------------ 93 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNN------------ 93 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCS------------
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCC------------
Confidence 334556778899999999999 9873 355667778999999999999974322 2222222
Q ss_pred CccccceeCCCCcCccc----CChhhhcccccccccc--cCCCCCC
Q 039819 93 GVDQGLLRLNNNSLSGA----FPVFLAKISELAFLDL--SYNNLSG 132 (534)
Q Consensus 93 ~~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~l--s~N~l~g 132 (534)
.|+.|+|++|.|... +..++...+.|+.|+| ++|.++.
T Consensus 94 --~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 94 --TLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp --SCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred --CcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 789999999999743 5667778889999999 8899873
No 411
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.94 E-value=4.8e-05 Score=75.07 Aligned_cols=125 Identities=18% Similarity=0.152 Sum_probs=83.0
Q ss_pred CCeeccCCcEEEEEEEECCCcEEEEEEehh------------hhhhcccC---ceeeEEEEEe-CCCeeEEEeeccCCCC
Q 039819 207 KNILGAGGFGNVYKGKLGDGTVLAVKRLKD------------MISLAVHR---NLLRLIGYCA-TPTERLLVYPYMSNGS 270 (534)
Q Consensus 207 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~------------~l~~~~h~---niv~l~~~~~-~~~~~~lv~e~~~~gs 270 (534)
.+.++.|....||+. +..+++|.-.. .+..+.+. .+.+++.++. ..+..++||||++|..
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 356888999999988 45577776531 34444432 3556676664 4455789999999988
Q ss_pred hhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------------
Q 039819 271 VASRLREKPALDWNTRKRIAIGAARGLLYLHEQ----------------------------------------------- 303 (534)
Q Consensus 271 L~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~----------------------------------------------- 303 (534)
+.+... ..++...+..++.++++.|+.||+.
T Consensus 100 l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 177 (306)
T 3tdw_A 100 LGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQ 177 (306)
T ss_dssp CHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHH
T ss_pred Cchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHH
Confidence 765321 1234455555555666665555542
Q ss_pred ----------CCCCeEeccCCCCcEEeCC---CCc-EEEEecccceec
Q 039819 304 ----------CDPKIIHRDVKAANVLLDD---FCE-AIVGDFGLAKLL 337 (534)
Q Consensus 304 ----------~~~~ivH~Dlkp~NiLl~~---~~~-~kl~DFGla~~~ 337 (534)
..+.++|+|+++.|||++. ++. ..|+||+.+...
T Consensus 178 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 178 SYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2235699999999999987 455 489999988653
No 412
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.87 E-value=1.8e-06 Score=93.16 Aligned_cols=127 Identities=15% Similarity=0.179 Sum_probs=89.2
Q ss_pred CcEEEEEe---------cCCCceeecccccc-cCCCCCEEEccCCccCcCCCCCCC-CCCCCCEEEcC--C----CcCcc
Q 039819 8 NLVIGLGA---------PSQSLSGTLSGSIG-NLTNLRQVLLQNNNISGGIPPQLG-SLPKLQTLDLS--N----NRLSG 70 (534)
Q Consensus 8 ~~l~~L~l---------~~n~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~P~~~~-~l~~L~~L~Ls--~----N~l~g 70 (534)
.+++.|+| +.+.+++.....+. ++++|++|.++.|++++..+..+. .+++|+.|+|+ + |.+++
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 46888988 44677655444444 489999999999999876555555 58999999999 4 66763
Q ss_pred cc-----CchhhhcccCcccccccccCCccccceeCCCCcCcccCChhhhc-ccccccccccCCCCCCCCCCCC------
Q 039819 71 VI-----PALLFLSIWLPRKWDKRKCSGVDQGLLRLNNNSLSGAFPVFLAK-ISELAFLDLSYNNLSGPVPKFP------ 138 (534)
Q Consensus 71 ~~-----p~~~~~l~~l~~~~~~~~~~~~~L~~L~L~~N~l~g~~p~~~~~-l~~L~~L~ls~N~l~g~~p~~~------ 138 (534)
.. +..+..++ +|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..+
T Consensus 418 ~~~~~~~~~l~~~~~--------------~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 482 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCK--------------DLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDS 482 (594)
T ss_dssp CCTHHHHHHHHHHCT--------------TCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTT
T ss_pred CchhhHHHHHHhhCC--------------CccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCC
Confidence 21 12234444 788999977 777666666666 8899999999999875322111
Q ss_pred CccccccCCcc
Q 039819 139 ARTFNVAGNPL 149 (534)
Q Consensus 139 ~~~~~~~~N~~ 149 (534)
-+.+.+.+|+.
T Consensus 483 L~~L~L~~n~~ 493 (594)
T 2p1m_B 483 LRKLEIRDCPF 493 (594)
T ss_dssp CCEEEEESCSC
T ss_pred cCEEECcCCCC
Confidence 15667777765
No 413
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.83 E-value=6.2e-05 Score=72.51 Aligned_cols=124 Identities=19% Similarity=0.150 Sum_probs=84.9
Q ss_pred eeccCCcE-EEEEEEEC-CCcEEEEEEehh-----------hhhhcc-cCceeeEEEEEeCCCeeEEEeeccCCCChhhh
Q 039819 209 ILGAGGFG-NVYKGKLG-DGTVLAVKRLKD-----------MISLAV-HRNLLRLIGYCATPTERLLVYPYMSNGSVASR 274 (534)
Q Consensus 209 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~-----------~l~~~~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 274 (534)
.+..|..| .||+.... ++..+.+|+-.. .+..+. +--+.++++++.+.+..++|||++++.++.+.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~ 110 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV 110 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccc
Confidence 45556665 69988765 456788887541 222221 22366788899888999999999999887665
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------------
Q 039819 275 LREKPALDWNTRKRIAIGAARGLLYLHEQC-------------------------------------------------- 304 (534)
Q Consensus 275 l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~-------------------------------------------------- 304 (534)
.... ......+..++++.|.-||...
T Consensus 111 ~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (272)
T 4gkh_A 111 LEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKL 186 (272)
T ss_dssp HHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTT
T ss_pred ccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhc
Confidence 4321 1223455666666666666421
Q ss_pred -----CCCeEeccCCCCcEEeCCCCcEEEEeccccee
Q 039819 305 -----DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336 (534)
Q Consensus 305 -----~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~ 336 (534)
.+.++|+|+.+.|||++..+.+-|+||+.+..
T Consensus 187 ~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 187 LPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11379999999999999877777999988753
No 414
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.79 E-value=6.6e-05 Score=75.57 Aligned_cols=66 Identities=11% Similarity=-0.027 Sum_probs=44.1
Q ss_pred Cee-ccCCcEEEEEEEEC-------CCcEEEEEEehh-----------------hhhhcc-c--CceeeEEEEEeCC---
Q 039819 208 NIL-GAGGFGNVYKGKLG-------DGTVLAVKRLKD-----------------MISLAV-H--RNLLRLIGYCATP--- 256 (534)
Q Consensus 208 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~-----------------~l~~~~-h--~niv~l~~~~~~~--- 256 (534)
+.| +.|....+|+.... ++..+++|+... .+..+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 88889999998764 256788886431 222222 2 2466778877665
Q ss_pred CeeEEEeeccCCCChhh
Q 039819 257 TERLLVYPYMSNGSVAS 273 (534)
Q Consensus 257 ~~~~lv~e~~~~gsL~~ 273 (534)
...++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 34689999999877654
No 415
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.77 E-value=4.3e-05 Score=78.48 Aligned_cols=69 Identities=13% Similarity=0.110 Sum_probs=38.2
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCc-----cccCchhhhcc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLS-----GVIPALLFLSI 80 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~-----g~~p~~~~~l~ 80 (534)
+|+.|+|.+| ++..-..+|.+ .+|+.+.| .|+++..-+.+|.+|++|+.|+|.+|.+. ...+..|..+.
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~ 300 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCP 300 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCT
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCc
Confidence 5666666653 55344445665 56666666 34455333455666666666666666554 23334455554
No 416
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.59 E-value=0.00013 Score=74.83 Aligned_cols=118 Identities=14% Similarity=0.070 Sum_probs=48.3
Q ss_pred EEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc--
Q 039819 10 VIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD-- 87 (534)
Q Consensus 10 l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~-- 87 (534)
|+.|.|.+ +++..-+.+|.++++|+.|+|++|+++ .+|.....+.+|+.+.|.+| ++..-..+|..+.+|.....
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 44444443 444333344555555555555555554 23332222345555555422 44233334444433222111
Q ss_pred ------ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCC
Q 039819 88 ------KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLS 131 (534)
Q Consensus 88 ------~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 131 (534)
...+.+.+|+.+.| .|.++..-+.+|.+|.+|+.+++.+|.+.
T Consensus 236 ~l~~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 236 NVSTIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp TCCEECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred CccCccccccccCCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 11111223444444 23333233445555555555555555443
No 417
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.54 E-value=7.4e-05 Score=77.17 Aligned_cols=79 Identities=13% Similarity=-0.021 Sum_probs=48.9
Q ss_pred CCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCceeeccccccccccccccccC---CCCcchhHHHHHHHHHHH
Q 039819 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTG---QSSEKTDVFGFGILLLEL 381 (534)
Q Consensus 305 ~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~k~Dv~S~Gvvl~el 381 (534)
.+.++|+|++|.|||++.++ ++|+||+.+..-............-...|++|+..... ......++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 34799999999999999876 99999998875431100000000012346777655321 112235566888888888
Q ss_pred HhC
Q 039819 382 ITG 384 (534)
Q Consensus 382 ltG 384 (534)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.48 E-value=0.00032 Score=69.69 Aligned_cols=31 Identities=26% Similarity=0.366 Sum_probs=27.6
Q ss_pred CCCeEeccCCCCcEEeCCCCcEEEEecccce
Q 039819 305 DPKIIHRDVKAANVLLDDFCEAIVGDFGLAK 335 (534)
Q Consensus 305 ~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~ 335 (534)
...++|+|+++.|||++.++.+.|+||+.+.
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 4589999999999999888899999999775
No 419
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.43 E-value=8.6e-05 Score=75.03 Aligned_cols=107 Identities=15% Similarity=0.160 Sum_probs=69.0
Q ss_pred CcEEEEEecCCCc---------eeecccccccCCCCCEEEccCCc-cCcCCCCCCCCCCCCCEEEcCCCcCccccCchhh
Q 039819 8 NLVIGLGAPSQSL---------SGTLSGSIGNLTNLRQVLLQNNN-ISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLF 77 (534)
Q Consensus 8 ~~l~~L~l~~n~l---------~g~~p~~~~~l~~L~~L~L~~N~-l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 77 (534)
.+|+.|.+..+.. .+.++..+..+++|+.|+|++|. + .+|. +. +++|+.|+|..|.++...-..+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l--~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL--SIGK-KP-RPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC--BCCS-CB-CTTCSEEEEECSBCCHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc--eecc-cc-CCCCcEEEEecCCCChHHHHHHH
Confidence 4678888876543 12355566778899999998873 3 3444 43 78999999988887643333333
Q ss_pred --hcccCcccccccccCCccccceeCCC--CcCccc-----CChhh--hcccccccccccCCCCCC
Q 039819 78 --LSIWLPRKWDKRKCSGVDQGLLRLNN--NSLSGA-----FPVFL--AKISELAFLDLSYNNLSG 132 (534)
Q Consensus 78 --~l~~l~~~~~~~~~~~~~L~~L~L~~--N~l~g~-----~p~~~--~~l~~L~~L~ls~N~l~g 132 (534)
.++ +|+.|+|+. |...|. +...+ ..+++|+.|+|++|.++.
T Consensus 215 ~~~lp--------------~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~ 266 (362)
T 2ra8_A 215 GSDLP--------------NLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQN 266 (362)
T ss_dssp HSBCT--------------TCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHH
T ss_pred HccCC--------------CCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCch
Confidence 334 788888853 322111 11222 357899999999999874
No 420
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.33 E-value=0.00067 Score=69.24 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=26.1
Q ss_pred CCeEeccCCCCcEEeCCCCcEEEEecccceec
Q 039819 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337 (534)
Q Consensus 306 ~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~ 337 (534)
+.++|+|+.+.|||++.+ .++|.||..+...
T Consensus 227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~G 257 (397)
T 2olc_A 227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAFYG 257 (397)
T ss_dssp CEEECSCCSGGGEEECSS-CEEECCCTTCEEE
T ss_pred CceeeCCCCcCcEEEeCC-CeEEEeCcccccC
Confidence 479999999999999875 4889999877643
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.29 E-value=0.00025 Score=60.42 Aligned_cols=56 Identities=23% Similarity=0.354 Sum_probs=38.0
Q ss_pred EEEecCCCce-eecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCc
Q 039819 12 GLGAPSQSLS-GTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLS 69 (534)
Q Consensus 12 ~L~l~~n~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~ 69 (534)
.++.++++|+ ..+|..|. .+|++|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677778776 24564432 46788888888887433445677788888888888765
No 422
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.26 E-value=0.0015 Score=64.42 Aligned_cols=124 Identities=16% Similarity=0.140 Sum_probs=79.0
Q ss_pred CCeeccCCcEEEEEEEECCCcEEEEEEehh-----------hhhhcc---cCceeeEEEEEeCCCeeEEEeeccCCCChh
Q 039819 207 KNILGAGGFGNVYKGKLGDGTVLAVKRLKD-----------MISLAV---HRNLLRLIGYCATPTERLLVYPYMSNGSVA 272 (534)
Q Consensus 207 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-----------~l~~~~---h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 272 (534)
.+.|+.|....+|+... ++..+++|+... .+..+. ...+.+++.++...+..++||||+++..+.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~ 119 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNK 119 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCC
Confidence 45789999999999987 456778887531 233322 356788888888888899999999987642
Q ss_pred h-----------hcccC---C-------------------CCCHHHHH---HHH----------------HHHHHH-HHH
Q 039819 273 S-----------RLREK---P-------------------ALDWNTRK---RIA----------------IGAARG-LLY 299 (534)
Q Consensus 273 ~-----------~l~~~---~-------------------~l~~~~~~---~i~----------------~~i~~~-l~y 299 (534)
. .++.. . .-+|.... ++. ..+++. ...
T Consensus 120 ~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~~ 199 (312)
T 3jr1_A 120 QSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADT 199 (312)
T ss_dssp TTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 1 11111 1 01454321 111 111111 123
Q ss_pred HHh-cCCCCeEeccCCCCcEEeCCCCcEEEEecc
Q 039819 300 LHE-QCDPKIIHRDVKAANVLLDDFCEAIVGDFG 332 (534)
Q Consensus 300 LH~-~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFG 332 (534)
|.. ...+.+||+|+.+.|++++.++ +.|.||.
T Consensus 200 L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 200 LSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred hccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 321 2356899999999999999887 8888974
No 423
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.03 E-value=0.0011 Score=56.30 Aligned_cols=57 Identities=19% Similarity=0.200 Sum_probs=39.1
Q ss_pred CEEEccCCccC-cCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccccccCCccccceeCCCCcCc
Q 039819 35 RQVLLQNNNIS-GGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRKCSGVDQGLLRLNNNSLS 107 (534)
Q Consensus 35 ~~L~L~~N~l~-g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~~~~~~~L~~L~L~~N~l~ 107 (534)
..++.++++|+ ..+|..+. ++|+.|+|++|+|+...+..|..+. +|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~--------------~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALP--------------ALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCT--------------TCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhcc--------------ccCEEEecCCCee
Confidence 47788888886 35775543 3688888888888854445555555 6677788777764
No 424
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.98 E-value=0.00014 Score=66.39 Aligned_cols=113 Identities=18% Similarity=0.206 Sum_probs=60.6
Q ss_pred CCcEEEEEecCC-Cceee----cccccccCCCCCEEEccCCccCc----CCCCCCCCCCCCCEEEcCCCcCccccCchhh
Q 039819 7 ENLVIGLGAPSQ-SLSGT----LSGSIGNLTNLRQVLLQNNNISG----GIPPQLGSLPKLQTLDLSNNRLSGVIPALLF 77 (534)
Q Consensus 7 ~~~l~~L~l~~n-~l~g~----~p~~~~~l~~L~~L~L~~N~l~g----~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 77 (534)
...++.|+|++| +|... +-..+..-+.|+.|+|++|+|.. .|-..+..-+.|+.|+|++|+|...=-..+.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 345777777764 66422 33445555677777777777762 2333333456777777777777632111121
Q ss_pred hcccCcccccccccCCccccceeCCCC---cCcc----cCChhhhcccccccccccCCC
Q 039819 78 LSIWLPRKWDKRKCSGVDQGLLRLNNN---SLSG----AFPVFLAKISELAFLDLSYNN 129 (534)
Q Consensus 78 ~l~~l~~~~~~~~~~~~~L~~L~L~~N---~l~g----~~p~~~~~l~~L~~L~ls~N~ 129 (534)
... .. ...|+.|+|++| .+.. .+-..+..-+.|+.|+++.|.
T Consensus 120 ~aL--~~--------N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 120 RST--LV--------TQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHT--TT--------TCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHH--hh--------CCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 111 00 115677777654 3321 233344455667777776554
No 425
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.89 E-value=0.004 Score=60.38 Aligned_cols=63 Identities=22% Similarity=0.299 Sum_probs=42.8
Q ss_pred CCcCCeeccCCcEEEEEEEECCCcEEEEEEehh--------------hhhhccc---CceeeEEEEEeCCCeeEEEeecc
Q 039819 204 FSSKNILGAGGFGNVYKGKLGDGTVLAVKRLKD--------------MISLAVH---RNLLRLIGYCATPTERLLVYPYM 266 (534)
Q Consensus 204 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~--------------~l~~~~h---~niv~l~~~~~~~~~~~lv~e~~ 266 (534)
....+.+|.|..+.||+.++.||+.|.||+-.. .++.+.. --+.+++++. ..++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence 344567899999999999999999999997431 2222221 1234445442 347999999
Q ss_pred CCCC
Q 039819 267 SNGS 270 (534)
Q Consensus 267 ~~gs 270 (534)
+++.
T Consensus 93 ~~~~ 96 (288)
T 3f7w_A 93 DERP 96 (288)
T ss_dssp CCCC
T ss_pred cccC
Confidence 8764
No 426
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.83 E-value=0.003 Score=62.16 Aligned_cols=145 Identities=12% Similarity=0.067 Sum_probs=81.7
Q ss_pred cccCHHHHHHHHhCCCcC-----CeeccCCcEEEEEEEECCCcEEEEEEehh------------hhhhcccCc--eeeEE
Q 039819 190 RNFTFRELQQATENFSSK-----NILGAGGFGNVYKGKLGDGTVLAVKRLKD------------MISLAVHRN--LLRLI 250 (534)
Q Consensus 190 ~~~~~~~l~~~~~~~~~~-----~~lG~G~~g~Vy~~~~~~~~~vavK~~~~------------~l~~~~h~n--iv~l~ 250 (534)
..++.+++......|... +.|+.|....+|+....++ .+++|.... .+..+.... +.+++
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 456777888777777652 3466788899999988766 467886542 222222111 22232
Q ss_pred EE------EeCCCeeEEEeeccCCCChhh--------------hccc---C---C---C---CCHHHHHH----------
Q 039819 251 GY------CATPTERLLVYPYMSNGSVAS--------------RLRE---K---P---A---LDWNTRKR---------- 288 (534)
Q Consensus 251 ~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~---~---~---~---l~~~~~~~---------- 288 (534)
.. ....+..++||+|++|..+.. .++. . . . ..|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 112345689999998865321 0110 0 0 0 12332111
Q ss_pred --HHHHHHHHHHHHHhc----CCCCeEeccCCCCcEEeCCCCcEEEEecccce
Q 039819 289 --IAIGAARGLLYLHEQ----CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK 335 (534)
Q Consensus 289 --i~~~i~~~l~yLH~~----~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~ 335 (534)
+...+.+.+.+++.. ....++|+|+.+.|||++.+..+.|+||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455666532 13478999999999999987666899998775
No 427
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.74 E-value=0.0063 Score=55.98 Aligned_cols=97 Identities=14% Similarity=0.102 Sum_probs=63.7
Q ss_pred Chhhhcc-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEeCCCCcEEEEecccceecCCCCCceeecc
Q 039819 270 SVASRLR-EKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAV 348 (534)
Q Consensus 270 sL~~~l~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 348 (534)
+|.+.|. ...++++++++.++.|.+.+|.-+-.+.. + ..+=+-|..|++..+|.+...+ +.+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc-------------
Confidence 7888887 46789999999999999999877622111 1 1223446889999999887653 1110
Q ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHh
Q 039819 349 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 383 (534)
Q Consensus 349 ~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~ellt 383 (534)
.....+.|||... ...+.+.=|||+|+++|..+-
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 0123466888763 345788899999999999885
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.60 E-value=0.00055 Score=61.31 Aligned_cols=96 Identities=11% Similarity=-0.008 Sum_probs=60.4
Q ss_pred cccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCc-CccccCchhhhcccCcccccccccCCccccceeCC
Q 039819 24 LSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNR-LSGVIPALLFLSIWLPRKWDKRKCSGVDQGLLRLN 102 (534)
Q Consensus 24 ~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~l~~~~~~~~~~~~~L~~L~L~ 102 (534)
+|.....--+|+.|+|+++.|+..==..+.+|++|+.|+|+++. |+.. .+..+..+.. . ..+|+.|+|+
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~---gL~~L~~~~~-----~--~~~L~~L~Ls 122 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDG---CLERLSQLEN-----L--QKSMLEMEII 122 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHH---HHHHHHTCHH-----H--HHHCCEEEEE
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHH---HHHHHHhccc-----c--cCCCCEEEcC
Confidence 45433223478999999998874322346789999999999985 6532 2222221100 0 0058889999
Q ss_pred CC-cCcccCChhhhcccccccccccCCC
Q 039819 103 NN-SLSGAFPVFLAKISELAFLDLSYNN 129 (534)
Q Consensus 103 ~N-~l~g~~p~~~~~l~~L~~L~ls~N~ 129 (534)
++ +++..==..+..+++|+.|+|++..
T Consensus 123 ~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 123 SCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp SCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 87 4764323456788999999998754
No 429
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.59 E-value=0.0087 Score=58.36 Aligned_cols=30 Identities=20% Similarity=0.145 Sum_probs=25.2
Q ss_pred CCeEeccCCCCcEEeCCCCcEEEEeccccee
Q 039819 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336 (534)
Q Consensus 306 ~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~ 336 (534)
..++|+|+.+.||+ ..++.+.|+||..+..
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 35899999999999 5567789999988764
No 430
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.46 E-value=0.0069 Score=61.60 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=18.7
Q ss_pred cccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcC
Q 039819 26 GSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLS 64 (534)
Q Consensus 26 ~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls 64 (534)
.+|.++.+|+.+.+.++..+ .-..+|.++.+|+.+.+.
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~ 296 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS 296 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC
T ss_pred ceeeecccccEEecccccce-ecCcccccccccccccCC
Confidence 34555555555555444333 333345555555555553
No 431
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.46 E-value=0.0073 Score=60.93 Aligned_cols=86 Identities=15% Similarity=0.162 Sum_probs=38.3
Q ss_pred ccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccccccCCccccceeCCCC
Q 039819 25 SGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRKCSGVDQGLLRLNNN 104 (534)
Q Consensus 25 p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~~~~~~~L~~L~L~~N 104 (534)
..+|.++.+|+.+.+..+ ++..-..+|.++.+|+.+.+..+ ++..-...|..+. +|+.+.+.+|
T Consensus 233 ~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~--------------~L~~i~l~~~ 296 (379)
T 4h09_A 233 DGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS--------------NLTKVVMDNS 296 (379)
T ss_dssp TTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT--------------TCCEEEECCT
T ss_pred cccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc--------------cccccccccc
Confidence 344555555555555443 33223334555555555555432 3312223333333 4444455444
Q ss_pred cCcccCChhhhccccccccccc
Q 039819 105 SLSGAFPVFLAKISELAFLDLS 126 (534)
Q Consensus 105 ~l~g~~p~~~~~l~~L~~L~ls 126 (534)
.++..-..+|.++.+|+.+.|.
T Consensus 297 ~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 297 AIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp TCCEECTTTTTTCTTCCEEECC
T ss_pred ccceehhhhhcCCCCCCEEEcC
Confidence 4442333444455555555443
No 432
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.28 E-value=0.013 Score=57.77 Aligned_cols=144 Identities=13% Similarity=0.140 Sum_probs=80.0
Q ss_pred cccCHHHHHHHHhCCCc-----CCeeccCCcEEEEEEEECCCcEEEEEEehh-------------hhhhcccC--ceeeE
Q 039819 190 RNFTFRELQQATENFSS-----KNILGAGGFGNVYKGKLGDGTVLAVKRLKD-------------MISLAVHR--NLLRL 249 (534)
Q Consensus 190 ~~~~~~~l~~~~~~~~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-------------~l~~~~h~--niv~l 249 (534)
...+.+++..+...|.. ...++ |....||+....+|..+++|.... .+..+... .++++
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~ 87 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAP 87 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecce
Confidence 34566667666665543 23466 888899998887787788998741 12222211 13334
Q ss_pred EEE-----EeCCCeeEEEeeccCCCChhh-----------h---cc----c-----CCCCCHHHH----HHH--------
Q 039819 250 IGY-----CATPTERLLVYPYMSNGSVAS-----------R---LR----E-----KPALDWNTR----KRI-------- 289 (534)
Q Consensus 250 ~~~-----~~~~~~~~lv~e~~~~gsL~~-----------~---l~----~-----~~~l~~~~~----~~i-------- 289 (534)
+.. ....+..++||+|++|..+.. . ++ . ....++... ..+
T Consensus 88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (328)
T 1zyl_A 88 VAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP 167 (328)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred eecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence 332 112345578999998754321 0 11 0 011222211 001
Q ss_pred -------HHHHHHHHHHHHhc----CCCCeEeccCCCCcEEeCCCCcEEEEeccccee
Q 039819 290 -------AIGAARGLLYLHEQ----CDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336 (534)
Q Consensus 290 -------~~~i~~~l~yLH~~----~~~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~ 336 (534)
...+.+.+..+... ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 168 SGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333321 234689999999999999 4 899999987754
No 433
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.25 E-value=0.00079 Score=60.25 Aligned_cols=86 Identities=12% Similarity=0.110 Sum_probs=60.6
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCc-cCcCCCCCCCCC----CCCCEEEcCCCc-CccccCchhhhccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNN-ISGGIPPQLGSL----PKLQTLDLSNNR-LSGVIPALLFLSIW 81 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~P~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l~~ 81 (534)
-+|+.|||+++.|+..--..+.++++|+.|+|+++. |+..-=..+..+ ++|+.|+|+++. ++..==..+..++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~- 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFR- 139 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCT-
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCC-
Confidence 369999999999886545668899999999999985 763211223443 479999999974 7632112233333
Q ss_pred CcccccccccCCccccceeCCCCc-Cc
Q 039819 82 LPRKWDKRKCSGVDQGLLRLNNNS-LS 107 (534)
Q Consensus 82 l~~~~~~~~~~~~~L~~L~L~~N~-l~ 107 (534)
+|+.|+|++.. ++
T Consensus 140 -------------~L~~L~L~~c~~It 153 (176)
T 3e4g_A 140 -------------NLKYLFLSDLPGVK 153 (176)
T ss_dssp -------------TCCEEEEESCTTCC
T ss_pred -------------CCCEEECCCCCCCC
Confidence 88999999874 44
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.17 E-value=0.019 Score=56.78 Aligned_cols=33 Identities=39% Similarity=0.311 Sum_probs=28.1
Q ss_pred CCCeEeccCCCCcEEeCCC----CcEEEEecccceec
Q 039819 305 DPKIIHRDVKAANVLLDDF----CEAIVGDFGLAKLL 337 (534)
Q Consensus 305 ~~~ivH~Dlkp~NiLl~~~----~~~kl~DFGla~~~ 337 (534)
.+.++|||+.+.|||++.+ ..+.|+||+.+..-
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 3479999999999999874 67899999988754
No 435
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.03 E-value=0.0082 Score=61.03 Aligned_cols=104 Identities=10% Similarity=0.143 Sum_probs=78.8
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
.++.+.+.++-.+ .-..+|.++++|+.+.+. +.++..-..+|.++.+|+.++|..| ++-.-..+|..+.
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~-------- 334 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE-------- 334 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT--------
T ss_pred cccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC--------
Confidence 6788888766554 556789999999999996 5676444557999999999999865 6634456677777
Q ss_pred cccCCccccceeCCCCcCcccCChhhhcccccccccccCCCC
Q 039819 89 RKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNL 130 (534)
Q Consensus 89 ~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l 130 (534)
+|+.+.|..+ ++..-..+|.+|.+|+.+++.+|..
T Consensus 335 ------~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 335 ------QLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp ------TCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred ------CCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 7888888655 6634457899999999999887753
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.97 E-value=0.03 Score=58.11 Aligned_cols=61 Identities=10% Similarity=0.097 Sum_probs=38.3
Q ss_pred CCeeccCCcEEEEEEEECC-CcEEEEEEehh-------------hhhhcccCce-eeEEEEEeCCCeeEEEeeccCCCCh
Q 039819 207 KNILGAGGFGNVYKGKLGD-GTVLAVKRLKD-------------MISLAVHRNL-LRLIGYCATPTERLLVYPYMSNGSV 271 (534)
Q Consensus 207 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~-------------~l~~~~h~ni-v~l~~~~~~~~~~~lv~e~~~~gsL 271 (534)
.+.|+.|-...+|+....+ +..+.+|+... .+..+...++ .++++++. + .+||||+++..|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 3467888899999999875 46778886521 2333333333 46777663 2 359999987544
No 437
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.93 E-value=0.0077 Score=61.23 Aligned_cols=100 Identities=11% Similarity=-0.050 Sum_probs=69.8
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccc
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDK 88 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~ 88 (534)
.+..+.+..+. .....|..+.+|+.+.+.+| ++..-..+|.++.+|+.++|.++ ++-.-..+|..+.
T Consensus 277 ~l~~~~~~~~~---i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~-------- 343 (394)
T 4fs7_A 277 GLKKVIYGSVI---VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCT-------- 343 (394)
T ss_dssp TCCEEEECSSE---ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCT--------
T ss_pred ccceeccCcee---eccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCC--------
Confidence 34444444432 23457888899999998765 66444567889999999999754 6634456677776
Q ss_pred cccCCccccceeCCCCcCcccCChhhhcccccccccccCC
Q 039819 89 RKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYN 128 (534)
Q Consensus 89 ~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N 128 (534)
+|+.+.|..| ++..-..+|.+|.+|+.++|..|
T Consensus 344 ------~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 344 ------SLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp ------TCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred ------CCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 7778888776 66455678888999998888654
No 438
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.86 E-value=0.038 Score=54.91 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=28.0
Q ss_pred CCeEeccCCCCcEEeCCCCcEEEEecccceec
Q 039819 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL 337 (534)
Q Consensus 306 ~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~~ 337 (534)
..++|+|+.+.||+++.++.+.|+||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 46999999999999998888999999877643
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.80 E-value=0.021 Score=58.88 Aligned_cols=61 Identities=13% Similarity=0.218 Sum_probs=39.1
Q ss_pred CCeeccCCcEEEEEEEECC--------CcEEEEEEehh------------hhhhcccCce-eeEEEEEeCCCeeEEEeec
Q 039819 207 KNILGAGGFGNVYKGKLGD--------GTVLAVKRLKD------------MISLAVHRNL-LRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 207 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~------------~l~~~~h~ni-v~l~~~~~~~~~~~lv~e~ 265 (534)
.+.|+.|....||+....+ +..+.+|+... .+..+...++ .++++.+.+ .+||||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~ 153 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 153 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence 3467888899999998763 47788887622 1222222223 566666543 389999
Q ss_pred cCCCCh
Q 039819 266 MSNGSV 271 (534)
Q Consensus 266 ~~~gsL 271 (534)
++|.++
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 986444
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.73 E-value=0.025 Score=56.76 Aligned_cols=29 Identities=21% Similarity=0.361 Sum_probs=24.3
Q ss_pred CCeEeccCCCCcEEeCCCCcEEEEecccce
Q 039819 306 PKIIHRDVKAANVLLDDFCEAIVGDFGLAK 335 (534)
Q Consensus 306 ~~ivH~Dlkp~NiLl~~~~~~kl~DFGla~ 335 (534)
..++|+|+.+.|||++.+. +.|+||..+.
T Consensus 212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 212 IVFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp EEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred eEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 3689999999999998655 8999998775
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.72 E-value=0.0021 Score=58.52 Aligned_cols=93 Identities=14% Similarity=0.092 Sum_probs=62.8
Q ss_pred cccCCCCCEEEccCC-ccCc----CCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCcccccccccCCccccceeCC
Q 039819 28 IGNLTNLRQVLLQNN-NISG----GIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWDKRKCSGVDQGLLRLN 102 (534)
Q Consensus 28 ~~~l~~L~~L~L~~N-~l~g----~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~~~~~~~~~L~~L~L~ 102 (534)
+.+-+.|+.|+|++| +|.. .+-.++..-..|+.|+|++|+|...--..+.....- ...|+.|+|+
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~----------N~tL~~L~L~ 106 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIET----------SPSLRVLNVE 106 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHH----------CSSCCEEECC
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhc----------CCccCeEecC
Confidence 445578999999986 8862 244556667899999999999974322223221100 1178999999
Q ss_pred CCcCccc----CChhhhcccccccccccCCCC
Q 039819 103 NNSLSGA----FPVFLAKISELAFLDLSYNNL 130 (534)
Q Consensus 103 ~N~l~g~----~p~~~~~l~~L~~L~ls~N~l 130 (534)
+|.|... +-.++..-..|+.|+|++|..
T Consensus 107 ~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~ 138 (197)
T 1pgv_A 107 SNFLTPELLARLLRSTLVTQSIVEFKADNQRQ 138 (197)
T ss_dssp SSBCCHHHHHHHHHHTTTTCCCSEEECCCCSS
T ss_pred CCcCCHHHHHHHHHHHhhCCceeEEECCCCcC
Confidence 9999642 233445556799999987643
No 442
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.33 E-value=0.055 Score=54.64 Aligned_cols=124 Identities=14% Similarity=0.155 Sum_probs=70.8
Q ss_pred CeeccCCcEEEEEEEECC--------CcEEEEEEehh-------------hhhhcc-cCceeeEEEEEeCCCeeEEEeec
Q 039819 208 NILGAGGFGNVYKGKLGD--------GTVLAVKRLKD-------------MISLAV-HRNLLRLIGYCATPTERLLVYPY 265 (534)
Q Consensus 208 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~-------------~l~~~~-h~niv~l~~~~~~~~~~~lv~e~ 265 (534)
+.|..|....+|+....+ +..+.+|+.-. ++..+. +.-..++++++.+ .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 457778888999998753 46788887521 122222 1112566666654 299999
Q ss_pred cCCCChhhh-----------------cccC-----CCCC--HHHHHHHHHHHHH-------------------HHHHHHh
Q 039819 266 MSNGSVASR-----------------LREK-----PALD--WNTRKRIAIGAAR-------------------GLLYLHE 302 (534)
Q Consensus 266 ~~~gsL~~~-----------------l~~~-----~~l~--~~~~~~i~~~i~~-------------------~l~yLH~ 302 (534)
++|..|... ++.. .... |.++.++..++.. .+..|..
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 998655311 0111 1122 4555555544322 2333322
Q ss_pred ----c-CCCCeEeccCCCCcEEeCCC----CcEEEEecccce
Q 039819 303 ----Q-CDPKIIHRDVKAANVLLDDF----CEAIVGDFGLAK 335 (534)
Q Consensus 303 ----~-~~~~ivH~Dlkp~NiLl~~~----~~~kl~DFGla~ 335 (534)
. ....++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 1 12368999999999999876 788999998775
No 443
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.26 E-value=0.038 Score=55.99 Aligned_cols=54 Identities=13% Similarity=0.075 Sum_probs=23.6
Q ss_pred cEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcC
Q 039819 9 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLS 64 (534)
Q Consensus 9 ~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls 64 (534)
+|+.+.|++ +++.+-..+|.++++|+.++|.+| ++..-..+|.++.+|+.+.+.
T Consensus 72 ~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p 125 (394)
T 4fs7_A 72 KVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLP 125 (394)
T ss_dssp TEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred CceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhccc
Confidence 455555542 244222334555555555555433 332222334455555544444
No 444
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.88 E-value=0.055 Score=54.36 Aligned_cols=106 Identities=10% Similarity=0.105 Sum_probs=82.9
Q ss_pred CcEEEEEecCCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCcCccccCchhhhcccCccccc
Q 039819 8 NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPALLFLSIWLPRKWD 87 (534)
Q Consensus 8 ~~l~~L~l~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~l~~~~~ 87 (534)
..++.+.+..+ ++..-..+|.++.+|+.+.+..+ ++..-..+|.++.+|+.+.|.+|.++..-..+|..+.
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~------- 310 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCV------- 310 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCT-------
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCC-------
Confidence 36888888765 77555678999999999999755 6634455799999999999999999855556777777
Q ss_pred ccccCCccccceeCCCCcCcccCChhhhcccccccccccCCCCC
Q 039819 88 KRKCSGVDQGLLRLNNNSLSGAFPVFLAKISELAFLDLSYNNLS 131 (534)
Q Consensus 88 ~~~~~~~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~ 131 (534)
+|+.+.|.++ ++..-..+|.+|.+|+.+.+..| ++
T Consensus 311 -------~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~ 345 (379)
T 4h09_A 311 -------KLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-IT 345 (379)
T ss_dssp -------TCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CC
T ss_pred -------CCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cC
Confidence 7888999765 66344578999999999988654 44
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=89.43 E-value=1.3 Score=45.15 Aligned_cols=29 Identities=17% Similarity=0.299 Sum_probs=25.8
Q ss_pred CeEeccCCCCcEEeCCCCcEEEEeccccee
Q 039819 307 KIIHRDVKAANVLLDDFCEAIVGDFGLAKL 336 (534)
Q Consensus 307 ~ivH~Dlkp~NiLl~~~~~~kl~DFGla~~ 336 (534)
.++|+|+.+.||+ +.++.+.|+||..+..
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 5899999999999 7888999999988763
No 446
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=87.10 E-value=2.2 Score=38.93 Aligned_cols=117 Identities=9% Similarity=0.060 Sum_probs=79.5
Q ss_pred cccCceeeEEEEEeCCCeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCcEEe
Q 039819 241 AVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLL 320 (534)
Q Consensus 241 ~~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NiLl 320 (534)
..||+++.. .+-.+.+...+.|+.-+.+.=...+ ..++...+++++.+|+....+++.. +|--|.|+||++
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i---k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f 112 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI---KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFF 112 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG---GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEE
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHH---HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEE
Confidence 348888866 4555666666666654433222223 2467889999999999988666643 788899999999
Q ss_pred CCCCcEEEEecccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcC
Q 039819 321 DDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389 (534)
Q Consensus 321 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~ 389 (534)
+.++.+++.-.|+... ++|. ..+...=.-.+=+++..+++++..|+
T Consensus 113 ~~~~~p~i~~RGik~~------------------l~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNV------------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp CTTSCEEESCCEETTT------------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred cCCCCEEEEEccCccC------------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999976665322 2222 11222234467888999999998885
No 447
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=81.01 E-value=2.7 Score=38.47 Aligned_cols=116 Identities=14% Similarity=0.078 Sum_probs=78.4
Q ss_pred cccCceeeEEEEEeCCCeeEEEeeccCCCChhhhcccCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEeccCCCCcEE
Q 039819 241 AVHRNLLRLIGYCATPTERLLVYPYMSNGSVASRLREKPALDWNTRKRIAIGAARGLL-YLHEQCDPKIIHRDVKAANVL 319 (534)
Q Consensus 241 ~~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~l~~~~~~~i~~~i~~~l~-yLH~~~~~~ivH~Dlkp~NiL 319 (534)
..||.+ -...-.+.+...+.|+.-+++.=...+ ..++...+++++.+|+.... +++. -+|--+.|+||+
T Consensus 47 ~~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i---~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~ 116 (219)
T 4ano_A 47 EVDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI---RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLM 116 (219)
T ss_dssp GSCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH---HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEE
T ss_pred ccCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH---HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEE
Confidence 347777 344446677777777765444323333 34788899999999988777 6664 478889999999
Q ss_pred eCCCCcEEEEecccceecCCCCCceeeccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcC
Q 039819 320 LDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 389 (534)
Q Consensus 320 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvvl~elltG~~p~~ 389 (534)
++.++.++|.-.|+-. -++|.-+ +..-=.-.+=+++..++.++..|+
T Consensus 117 f~~~~~p~i~hRGi~~------------------~lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 117 FNRALEPFFLHVGVKE------------------SLPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp ECTTCCEEESCCEETT------------------TBSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EeCCCcEEEEEcCCcc------------------cCCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999997666532 2333321 222223367788899999988775
No 448
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=72.81 E-value=1.6 Score=44.11 Aligned_cols=29 Identities=24% Similarity=0.336 Sum_probs=25.7
Q ss_pred CeEeccCCCCcEEeCCC------CcEEEEecccce
Q 039819 307 KIIHRDVKAANVLLDDF------CEAIVGDFGLAK 335 (534)
Q Consensus 307 ~ivH~Dlkp~NiLl~~~------~~~kl~DFGla~ 335 (534)
.++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 68999999999999876 789999998775
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=66.72 E-value=2.8 Score=42.23 Aligned_cols=29 Identities=24% Similarity=0.429 Sum_probs=24.5
Q ss_pred eEeccCCCCcEEe------CCCCcEEEEeccccee
Q 039819 308 IIHRDVKAANVLL------DDFCEAIVGDFGLAKL 336 (534)
Q Consensus 308 ivH~Dlkp~NiLl------~~~~~~kl~DFGla~~ 336 (534)
++|+|+.+.|||+ ++...+.++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999988763
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=46.84 E-value=21 Score=27.92 Aligned_cols=50 Identities=18% Similarity=0.178 Sum_probs=37.9
Q ss_pred CCCceeecccccccCCCCCEEEccCCccCcCCCCCCCCCCCCCEEEcCCCc
Q 039819 17 SQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNR 67 (534)
Q Consensus 17 ~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~P~~~~~l~~L~~L~Ls~N~ 67 (534)
+..++.+-..+|.++++|+.+.|-.+ ++.+=..+|.+|.+|+.+.|....
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 45566555678999999999999865 553555679999999999987654
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=38.52 E-value=3.1 Score=42.84 Aligned_cols=45 Identities=2% Similarity=-0.014 Sum_probs=16.6
Q ss_pred CCeeccCCcEEEEEEEECC-CcEEEE------EEehh----------------hhhhcccCceeeEEEEEe
Q 039819 207 KNILGAGGFGNVYKGKLGD-GTVLAV------KRLKD----------------MISLAVHRNLLRLIGYCA 254 (534)
Q Consensus 207 ~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~----------------~l~~~~h~niv~l~~~~~ 254 (534)
.+.|| ||.||+|.+.. ..+||| |..++ ++....|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 34565 99999999864 367888 65542 234457999999888754
Done!