BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039825
MKSENLTMALVNLAGIMERADVSLLPGVYKEVGAALHTDPIGLDSLTLFRSIVQSSCYPL
AAYLFVHHNRAHVIALESNTEPVPVPRKAETQSHRIPLVALFPEPLKDTRDPRLPTM

High Scoring Gene Products

Symbol, full name Information P value
UNE2
AT1G78130 		protein from Arabidopsis thaliana 6.2e-27
AT5G10190 protein from Arabidopsis thaliana 2.2e-26
AT4G36790 protein from Arabidopsis thaliana 2.3e-10
AT2G18590 protein from Arabidopsis thaliana 4.6e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039825
        (117 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2194749 - symbol:UNE2 "AT1G78130" species:3702...   306  6.2e-27   1
TAIR|locus:2184163 - symbol:AT5G10190 "AT5G10190" species...   301  2.2e-26   1
TAIR|locus:2115430 - symbol:AT4G36790 "AT4G36790" species...   155  2.3e-10   1
TAIR|locus:2046313 - symbol:AT2G18590 "AT2G18590" species...   115  4.6e-06   1


>TAIR|locus:2194749 [details] [associations]
            symbol:UNE2 "AT1G78130" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0015144
            "carbohydrate transmembrane transporter activity" evidence=ISS]
            [GO:0016020 "membrane" evidence=ISS] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
            evidence=IEA] [GO:0009567 "double fertilization forming a zygote
            and endosperm" evidence=IMP] [GO:0015706 "nitrate transport"
            evidence=RCA] InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0055085
            eggNOG:COG0477 InterPro:IPR016196 SUPFAM:SSF103473
            InterPro:IPR020846 PROSITE:PS50850 EMBL:AC012680 GO:GO:0009567
            UniGene:At.18013 UniGene:At.71185 HOGENOM:HOG000240506
            ProtClustDB:CLSN2679494 EMBL:BT004567 EMBL:AK227331 IPI:IPI00528928
            PIR:E96810 RefSeq:NP_177937.1 ProteinModelPortal:Q9C9R9
            EnsemblPlants:AT1G78130.1 GeneID:844149 KEGG:ath:AT1G78130
            TAIR:At1g78130 InParanoid:Q9C9R9 OMA:SANSPNW PhylomeDB:Q9C9R9
            Genevestigator:Q9C9R9 Uniprot:Q9C9R9
        Length = 490

 Score = 306 (112.8 bits), Expect = 6.2e-27, P = 6.2e-27
 Identities = 59/76 (77%), Positives = 67/76 (88%)

Query:     1 MKSENLTMALVNLAGIMERADVSLLPGVYKEVGAALHTDPIGLDSLTLFRSIVQSSCYPL 60
             MK+E +T+ LVNLAGIMERAD SLLPGVYKEVG ALHTDP GL SLTL RS+VQ++CYPL
Sbjct:     1 MKAETMTLLLVNLAGIMERADESLLPGVYKEVGLALHTDPTGLGSLTLLRSMVQAACYPL 60

Query:    61 AAYLFVHHNRAHVIAL 76
             AAY+ + HNRAHVIAL
Sbjct:    61 AAYMAIRHNRAHVIAL 76


>TAIR|locus:2184163 [details] [associations]
            symbol:AT5G10190 "AT5G10190" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0015144 "carbohydrate transmembrane transporter
            activity" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
            "transmembrane transport" evidence=IEA] [GO:0002237 "response to
            molecule of bacterial origin" evidence=RCA] [GO:0006487 "protein
            N-linked glycosylation" evidence=RCA] [GO:0009627 "systemic
            acquired resistance" evidence=RCA] [GO:0015706 "nitrate transport"
            evidence=RCA] [GO:0031347 "regulation of defense response"
            evidence=RCA] InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0055085
            eggNOG:COG0477 InterPro:IPR016196 SUPFAM:SSF103473
            InterPro:IPR020846 PROSITE:PS50850 HOGENOM:HOG000240506
            EMBL:AF360162 EMBL:AY113893 IPI:IPI00548750 RefSeq:NP_196581.1
            UniGene:At.1632 ProteinModelPortal:Q9C5L6 STRING:Q9C5L6
            PRIDE:Q9C5L6 EnsemblPlants:AT5G10190.1 GeneID:830883
            KEGG:ath:AT5G10190 TAIR:At5g10190 InParanoid:Q9C5L6 OMA:VICCTIY
            PhylomeDB:Q9C5L6 ProtClustDB:CLSN2679494 ArrayExpress:Q9C5L6
            Genevestigator:Q9C5L6 Uniprot:Q9C5L6
        Length = 488

 Score = 301 (111.0 bits), Expect = 2.2e-26, P = 2.2e-26
 Identities = 62/76 (81%), Positives = 64/76 (84%)

Query:     1 MKSENLTMALVNLAGIMERADVSLLPGVYKEVGAALHTDPIGLDSLTLFRSIVQSSCYPL 60
             MKSE LT+ LV LAGIMERAD SLLPGVYKEVG ALH DP  L +LTLFRSIVQSSCYPL
Sbjct:     1 MKSETLTLVLVYLAGIMERADESLLPGVYKEVGDALHVDPTALGTLTLFRSIVQSSCYPL 60

Query:    61 AAYLFVHHNRAHVIAL 76
             AAYL   HNRAHVIAL
Sbjct:    61 AAYLSSRHNRAHVIAL 76


>TAIR|locus:2115430 [details] [associations]
            symbol:AT4G36790 "AT4G36790" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0015144
            "carbohydrate transmembrane transporter activity" evidence=ISS]
            [GO:0016020 "membrane" evidence=ISS] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
            evidence=IEA] [GO:0015706 "nitrate transport" evidence=RCA]
            InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0055085 eggNOG:COG0477
            InterPro:IPR016196 SUPFAM:SSF103473 EMBL:AL161590
            InterPro:IPR020846 PROSITE:PS50850 EMBL:Z99708 EMBL:AY063899
            EMBL:AY122924 IPI:IPI00543369 PIR:D85434 RefSeq:NP_195397.1
            UniGene:At.27151 ProteinModelPortal:O23203 PaxDb:O23203
            PRIDE:O23203 EnsemblPlants:AT4G36790.1 GeneID:829832
            KEGG:ath:AT4G36790 TAIR:At4g36790 HOGENOM:HOG000240506
            InParanoid:O23203 OMA:MAGSEFW PhylomeDB:O23203
            ProtClustDB:CLSN2685584 Genevestigator:O23203 Uniprot:O23203
        Length = 489

 Score = 155 (59.6 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 33/72 (45%), Positives = 46/72 (63%)

Query:     5 NLTMALVNLAGIMERADVSLLPGVYKEVGAALHTDPIGLDSLTLFRSIVQSSCYPLAAYL 64
             ++++ L+NLA IMERAD +LLP VYKEV  A +  P  L  LT  R+ VQ    PLA  L
Sbjct:    42 SISLILINLAAIMERADENLLPSVYKEVSEAFNAGPSDLGYLTFVRNFVQGLASPLAGVL 101

Query:    65 FVHHNRAHVIAL 76
              + ++R  V+A+
Sbjct:   102 VITYDRPIVLAI 113


>TAIR|locus:2046313 [details] [associations]
            symbol:AT2G18590 "AT2G18590" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0015144
            "carbohydrate transmembrane transporter activity" evidence=ISS]
            [GO:0016020 "membrane" evidence=ISS] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
            evidence=IEA] [GO:0015706 "nitrate transport" evidence=RCA]
            InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021 EMBL:CP002685
            GO:GO:0055085 InterPro:IPR016196 SUPFAM:SSF103473
            InterPro:IPR020846 PROSITE:PS50850 IPI:IPI00548157
            RefSeq:NP_179449.5 UniGene:At.52811 PRIDE:F4IQK9
            EnsemblPlants:AT2G18590.1 GeneID:816374 KEGG:ath:AT2G18590
            OMA:NIGAIEQ Uniprot:F4IQK9
        Length = 473

 Score = 115 (45.5 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 25/74 (33%), Positives = 41/74 (55%)

Query:     5 NLTMALVNLAGIMERADVSLLPGVYKEVGAALHTDPIGLDSLTLFRSIVQSSCYPLAAYL 64
             ++++ ++NLA +M+RAD  L+P   KE+  A H     +  L+  R+IVQ    PLA   
Sbjct:    12 SISLIIINLATMMQRADEKLIPSTAKELKEAFHAKLSDIGLLSFIRNIVQGLASPLAGLF 71

Query:    65 FVHHNRAHVIALES 78
              + ++R  V A  S
Sbjct:    72 AISYDRPTVFAFGS 85


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      117       117   0.00091  102 3  11 22  0.47    30
                                                     29  0.46    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  525 (56 KB)
  Total size of DFA:  105 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.89u 0.17s 13.06t   Elapsed:  00:00:01
  Total cpu time:  12.89u 0.17s 13.06t   Elapsed:  00:00:01
  Start:  Tue May 21 05:45:04 2013   End:  Tue May 21 05:45:05 2013

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