Query 039833
Match_columns 142
No_of_seqs 256 out of 1564
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 02:26:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039833.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039833hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02290 cytokinin trans-hydro 99.9 4.6E-23 1E-27 159.4 11.2 139 3-141 25-168 (516)
2 PTZ00404 cytochrome P450; Prov 99.8 1.6E-20 3.4E-25 144.2 5.1 122 3-142 12-137 (482)
3 PLN02169 fatty acid (omega-1)- 99.8 1.4E-19 3E-24 139.7 8.7 113 14-141 25-143 (500)
4 KOG0156 Cytochrome P450 CYP2 s 99.8 3E-19 6.4E-24 137.0 7.9 101 19-136 25-132 (489)
5 KOG0158 Cytochrome P450 CYP3/C 99.8 2.6E-19 5.7E-24 136.6 7.2 116 11-142 22-143 (499)
6 KOG0157 Cytochrome P450 CYP4/C 99.8 4.2E-19 9.2E-24 136.9 6.6 110 18-142 33-146 (497)
7 PLN02500 cytochrome P450 90B1 99.7 8.5E-18 1.8E-22 129.5 7.2 107 22-141 40-149 (490)
8 PLN02196 abscisic acid 8'-hydr 99.7 1.4E-17 3.1E-22 127.4 7.4 102 22-141 37-142 (463)
9 PLN02774 brassinosteroid-6-oxi 99.7 8.3E-18 1.8E-22 128.7 5.8 109 15-141 25-137 (463)
10 PLN02687 flavonoid 3'-monooxyg 99.7 3.1E-18 6.8E-23 132.7 3.1 103 21-141 35-144 (517)
11 PLN00168 Cytochrome P450; Prov 99.7 1.3E-17 2.7E-22 129.4 4.8 109 19-142 34-149 (519)
12 PLN03141 3-epi-6-deoxocathaste 99.7 4.7E-17 1E-21 124.2 7.6 107 22-141 9-118 (452)
13 PLN03195 fatty acid omega-hydr 99.7 5E-17 1.1E-21 125.9 7.8 107 16-141 26-139 (516)
14 PLN00110 flavonoid 3',5'-hydro 99.7 3.9E-17 8.5E-22 126.3 6.6 108 16-141 27-141 (504)
15 PLN02971 tryptophan N-hydroxyl 99.7 6.6E-17 1.4E-21 126.0 7.6 100 21-136 58-164 (543)
16 PLN03112 cytochrome P450 famil 99.7 2E-17 4.4E-22 128.0 2.7 104 20-141 32-142 (514)
17 PLN02183 ferulate 5-hydroxylas 99.7 5.9E-17 1.3E-21 125.6 5.3 104 20-141 36-146 (516)
18 PLN02655 ent-kaurene oxidase 99.7 2.2E-16 4.7E-21 121.0 7.8 100 22-138 1-107 (466)
19 PLN02738 carotene beta-ring hy 99.7 3.3E-16 7.2E-21 123.9 8.6 115 10-141 105-238 (633)
20 PLN02394 trans-cinnamate 4-mon 99.6 2.1E-16 4.5E-21 122.1 6.1 104 21-141 31-141 (503)
21 PLN02302 ent-kaurenoic acid ox 99.6 8.9E-16 1.9E-20 118.0 9.1 103 22-137 44-150 (490)
22 PF00067 p450: Cytochrome P450 99.6 8E-16 1.7E-20 115.7 7.4 102 22-139 1-109 (463)
23 PLN02987 Cytochrome P450, fami 99.6 5.5E-16 1.2E-20 119.1 5.7 101 22-135 32-135 (472)
24 PLN03018 homomethionine N-hydr 99.6 3.9E-15 8.4E-20 116.0 6.1 102 22-139 42-150 (534)
25 PLN02936 epsilon-ring hydroxyl 99.6 1.2E-14 2.5E-19 112.2 7.8 106 23-141 15-123 (489)
26 PLN02966 cytochrome P450 83A1 99.5 3.3E-15 7.2E-20 115.5 4.2 104 21-141 30-140 (502)
27 PLN03234 cytochrome P450 83B1; 99.5 1E-14 2.2E-19 112.6 5.3 105 20-141 28-139 (499)
28 PLN02648 allene oxide synthase 99.4 1.9E-13 4.1E-18 105.2 2.5 104 21-138 18-139 (480)
29 KOG0159 Cytochrome P450 CYP11/ 99.2 3.8E-11 8.3E-16 91.5 8.2 102 21-136 51-161 (519)
30 PLN02426 cytochrome P450, fami 99.1 1.3E-10 2.8E-15 90.2 7.4 78 62-141 65-147 (502)
31 KOG0684 Cytochrome P450 [Secon 98.2 3.4E-06 7.3E-11 64.0 5.1 96 28-141 40-140 (486)
32 COG2124 CypX Cytochrome P450 [ 98.0 6.2E-06 1.3E-10 62.8 3.5 77 65-141 30-115 (411)
33 PF13625 Helicase_C_3: Helicas 67.1 19 0.00042 22.8 4.8 37 60-98 77-113 (129)
34 cd01646 RT_Bac_retron_I RT_Bac 36.1 63 0.0014 21.0 3.5 27 70-96 80-106 (158)
35 PRK02302 hypothetical protein; 33.3 1.1E+02 0.0023 18.4 3.7 31 67-97 23-53 (89)
36 PHA01327 hypothetical protein 33.2 17 0.00037 18.4 0.3 18 115-132 12-29 (49)
37 PRK02886 hypothetical protein; 31.5 1.2E+02 0.0026 18.1 3.7 31 67-97 21-51 (87)
38 KOG4241 Mitochondrial ribosoma 30.0 41 0.00089 23.6 1.8 28 70-97 136-163 (245)
39 PF08599 Nbs1_C: DNA damage re 29.6 35 0.00076 19.0 1.2 22 14-35 4-26 (65)
40 PF08675 RNA_bind: RNA binding 27.5 72 0.0016 19.0 2.3 34 63-96 25-59 (87)
41 cd01648 TERT TERT: Telomerase 27.3 1.6E+02 0.0034 18.2 4.1 19 16-34 14-33 (119)
42 PF08780 NTase_sub_bind: Nucle 24.5 1.2E+02 0.0026 19.1 3.2 20 109-129 66-85 (124)
43 PF11028 DUF2723: Protein of u 23.8 32 0.0007 23.4 0.4 13 19-31 11-23 (178)
44 COG4471 Uncharacterized protei 22.7 1.9E+02 0.004 17.4 4.1 33 66-98 21-53 (90)
45 PF11616 EZH2_WD-Binding: WD r 22.0 48 0.001 15.5 0.7 7 123-129 20-26 (30)
46 PF07203 DUF1412: Protein of u 20.2 47 0.001 17.6 0.5 16 123-138 34-49 (53)
47 PF13893 RRM_5: RNA recognitio 20.1 1.5E+02 0.0032 15.2 4.0 33 65-97 3-39 (56)
No 1
>PLN02290 cytokinin trans-hydroxylase
Probab=99.89 E-value=4.6e-23 Score=159.36 Aligned_cols=139 Identities=20% Similarity=0.476 Sum_probs=104.0
Q ss_pred eeeeehhhHHHHHHHHhcCCCCCCCccccCCHHHHHHHhhhhcCCCCc-cccccccChhHHHHHHHHHhCCeEEeecCCc
Q 039833 3 LNWLWLKPKKLEKFIRDQGFSGNSYKVLLGDMRELAKTTKDAESKPIG-LSDNIAQPILPFHHHIITNYGKNSFIWMGPG 81 (142)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~ 81 (142)
++|++++++++.++++++|+|||+++|++||+.++.....+...+..+ ..++........+.+|.++||+++.+|+|+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~ 104 (516)
T PLN02290 25 ISCYFLTPRRIKKIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTE 104 (516)
T ss_pred HHHHhccHHHHHHHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCc
Confidence 467899999999999999999999999999999886422111000000 0011111233457889999999999999999
Q ss_pred CEEEEcCHHHHHHHHhcCCCC-ccch-H--HHHhhhcCCccccCchHHHHhhhhhcCCCCcccc
Q 039833 82 PIINITDPKIVREIFKKHDIF-QEQR-S--SVAKLLVSGMVVYEGEQRLKVKKLTTPHFRLDKL 141 (142)
Q Consensus 82 ~~vvv~dp~~ik~vl~~~~~~-~k~~-~--~~~~~~g~gl~~~~g~~Wk~~Rk~l~p~F~~~~l 141 (142)
++|+++|||++++++.+...+ .++. . .....+|.|+++++|+.|+++||+++++|+.+++
T Consensus 105 ~~vvv~dp~~v~~il~~~~~~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l 168 (516)
T PLN02290 105 PRLCLTETELIKELLTKYNTVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRL 168 (516)
T ss_pred cEEEECCHHHHHHHHhcCCCCCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHH
Confidence 999999999999999654433 5553 1 1334568899999999999999999999998655
No 2
>PTZ00404 cytochrome P450; Provisional
Probab=99.81 E-value=1.6e-20 Score=144.23 Aligned_cols=122 Identities=21% Similarity=0.338 Sum_probs=96.5
Q ss_pred eeeeehhhHHHHHHHHhcCCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcC
Q 039833 3 LNWLWLKPKKLEKFIRDQGFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGP 82 (142)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~ 82 (142)
+.|.++...+.+++.++.++|||+++|++||+.++... ....+.++.++||+++++++|+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~------------------~~~~~~~~~~~yG~i~~~~~g~~~ 73 (482)
T PTZ00404 12 IFYIIHNAYKKYKKIHKNELKGPIPIPILGNLHQLGNL------------------PHRDLTKMSKKYGGIFRIWFADLY 73 (482)
T ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCeeccHhhhccc------------------HHHHHHHHHHHhCCeeEEEecCCC
Confidence 34555666777778888999999999999999876431 134678899999999999999999
Q ss_pred EEEEcCHHHHHHHHh-cCCCCcc-ch-HHH-HhhhcCCccccCchHHHHhhhhhcCCCCccccC
Q 039833 83 IINITDPKIVREIFK-KHDIFQE-QR-SSV-AKLLVSGMVVYEGEQRLKVKKLTTPHFRLDKLK 142 (142)
Q Consensus 83 ~vvv~dp~~ik~vl~-~~~~~~k-~~-~~~-~~~~g~gl~~~~g~~Wk~~Rk~l~p~F~~~~lk 142 (142)
+|+++||+++++|+. +.+.|.+ +. ... ...+|.|+++++|+.|+++|++++|+|+.+.++
T Consensus 74 ~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~ 137 (482)
T PTZ00404 74 TVVLSDPILIREMFVDNFDNFSDRPKIPSIKHGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLK 137 (482)
T ss_pred EEEECCHHHHHHHHHhcchhhcCCCCcceeeeeccCCceeccChHHHHHHHHHHHHHHhhhccc
Confidence 999999999999995 4445643 32 111 223478999999999999999999999987664
No 3
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.80 E-value=1.4e-19 Score=139.74 Aligned_cols=113 Identities=12% Similarity=0.197 Sum_probs=88.2
Q ss_pred HHHHHhcCCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEE---eecCCcCEEEEcCHH
Q 039833 14 EKFIRDQGFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSF---IWMGPGPIINITDPK 90 (142)
Q Consensus 14 ~~~~~~~~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~---~~~g~~~~vvv~dp~ 90 (142)
+-+|+++|+|||+++|++||+.++.... . ...+.+.+...+||..+. .|+|+.|+|+++|||
T Consensus 25 ~~~~~~~~~p~p~~~pl~G~~~~~~~~~-----------~----~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe 89 (500)
T PLN02169 25 FIHKKPHGQPILKNWPFLGMLPGMLHQI-----------P----RIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPK 89 (500)
T ss_pred HHHhccCCCCCCCCCCcccchHHHHHcc-----------C----cHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHH
Confidence 4578899999999999999998775421 0 123445555556886554 688999999999999
Q ss_pred HHHHHHh-cCCCCccch--HHHHhhhcCCccccCchHHHHhhhhhcCCCCcccc
Q 039833 91 IVREIFK-KHDIFQEQR--SSVAKLLVSGMVVYEGEQRLKVKKLTTPHFRLDKL 141 (142)
Q Consensus 91 ~ik~vl~-~~~~~~k~~--~~~~~~~g~gl~~~~g~~Wk~~Rk~l~p~F~~~~l 141 (142)
++++||. +.+.|.++. ..+.+++|+|+++++|+.||++||+++|+|+..++
T Consensus 90 ~i~~il~~~~~~~~k~~~~~~~~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~ 143 (500)
T PLN02169 90 NIHHILSSNFGNYPKGPEFKKIFDVLGEGILTVDFELWEDLRKSNHALFHNQDF 143 (500)
T ss_pred HHHHHHhhCcccCCCcHHHHHHHHhhcCcccccCcHHHHHHHHHHHHHhhhHHH
Confidence 9999995 455777765 33446679999999999999999999999987653
No 4
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.79 E-value=3e-19 Score=136.98 Aligned_cols=101 Identities=15% Similarity=0.270 Sum_probs=80.2
Q ss_pred hcCCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHh-
Q 039833 19 DQGFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFK- 97 (142)
Q Consensus 19 ~~~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~- 97 (142)
..-+|||+++|++||++++... ..+..+.+++++||+++.+|+|..|+||++|+|+++|+|.
T Consensus 25 ~~lPPGP~~lPiIGnl~~l~~~-----------------~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~ 87 (489)
T KOG0156|consen 25 RNLPPGPPPLPIIGNLHQLGSL-----------------PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVK 87 (489)
T ss_pred CCCCcCCCCCCccccHHHcCCC-----------------chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHh
Confidence 3457899999999999988541 1235689999999999999999999999999999999995
Q ss_pred cCCCC-ccch-HHH-Hhhh--cCCcccc-CchHHHHhhhhhcCCC
Q 039833 98 KHDIF-QEQR-SSV-AKLL--VSGMVVY-EGEQRLKVKKLTTPHF 136 (142)
Q Consensus 98 ~~~~~-~k~~-~~~-~~~~--g~gl~~~-~g~~Wk~~Rk~l~p~F 136 (142)
+...| +|+. ... ..+. +.|++++ +|+.||.+||+....+
T Consensus 88 ~d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L 132 (489)
T KOG0156|consen 88 QDLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTEL 132 (489)
T ss_pred CCccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHh
Confidence 44477 5664 223 3333 3788888 7999999999987664
No 5
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.79 E-value=2.6e-19 Score=136.62 Aligned_cols=116 Identities=22% Similarity=0.348 Sum_probs=89.1
Q ss_pred HHHHHHHHhcCCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHH
Q 039833 11 KKLEKFIRDQGFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPK 90 (142)
Q Consensus 11 ~~~~~~~~~~~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~ 90 (142)
+..+.+|+++|+|+|+++|++||+..+..... ........|.++ |++++++.+.+|.++|+|||
T Consensus 22 ~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~---------------~~~~~~~~~~~~-~~~~G~y~~~~p~l~v~D~e 85 (499)
T KOG0158|consen 22 RWTYSYWRRRGIPGPKPLPFLGNLPGMLKRER---------------PGDLLLDIYTKY-RPVVGIYEGRQPALLVSDPE 85 (499)
T ss_pred HhhhhhhccCCCCCCCCCCcEecHHHHHhccC---------------cHHHHHHHHhcC-CCEEEEEecCCcceEecCHH
Confidence 33445899999999999999999998876311 001123334343 99999999999999999999
Q ss_pred HHHHHH-hcCCCCcc--ch---HHHHhhhcCCccccCchHHHHhhhhhcCCCCccccC
Q 039833 91 IVREIF-KKHDIFQE--QR---SSVAKLLVSGMVVYEGEQRLKVKKLTTPHFRLDKLK 142 (142)
Q Consensus 91 ~ik~vl-~~~~~~~k--~~---~~~~~~~g~gl~~~~g~~Wk~~Rk~l~p~F~~~~lk 142 (142)
+|++|+ +++++|.. .. +.-.++...++++++|++||++|..++|+|++.+||
T Consensus 86 lik~I~ik~F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk 143 (499)
T KOG0158|consen 86 LIKEILIKDFDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLK 143 (499)
T ss_pred HHHHHHHHhCccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhccccchhhHH
Confidence 999999 67888843 22 222233347899999999999999999999999886
No 6
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.77 E-value=4.2e-19 Score=136.95 Aligned_cols=110 Identities=29% Similarity=0.518 Sum_probs=92.4
Q ss_pred HhcCCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHh
Q 039833 18 RDQGFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFK 97 (142)
Q Consensus 18 ~~~~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~ 97 (142)
..+++|||+++|++||+.++.... .....++.++..+||++|..|+|+.|.|+++|||.+++|+.
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~ 97 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPL---------------EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILK 97 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcch---------------hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHh
Confidence 466789999999999999886521 12345688899999999999999999999999999999994
Q ss_pred -cCCCCccch---HHHHhhhcCCccccCchHHHHhhhhhcCCCCccccC
Q 039833 98 -KHDIFQEQR---SSVAKLLVSGMVVYEGEQRLKVKKLTTPHFRLDKLK 142 (142)
Q Consensus 98 -~~~~~~k~~---~~~~~~~g~gl~~~~g~~Wk~~Rk~l~p~F~~~~lk 142 (142)
+.+.+.+.. ..+.+++|+|+++++|+.|+++||+++|+|+.+.+|
T Consensus 98 ~~~~~~~k~~~~~~~~~~~lG~gll~~~g~~W~~~Rk~~~~~f~~~~L~ 146 (497)
T KOG0157|consen 98 SSNENYPKGPDYPESLKPWLGDGLLFSDGEKWHKHRKLLTPAFHFEILK 146 (497)
T ss_pred cCcccCCCchhHHHHHHHHhcCccccCCchHHHHHHhhccHhhhHHHHH
Confidence 455665554 467789999999999999999999999999987653
No 7
>PLN02500 cytochrome P450 90B1
Probab=99.73 E-value=8.5e-18 Score=129.46 Aligned_cols=107 Identities=21% Similarity=0.246 Sum_probs=81.7
Q ss_pred CCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHhcC-C
Q 039833 22 FSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFKKH-D 100 (142)
Q Consensus 22 ~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~~~-~ 100 (142)
+|||+++|++||+..+..... + ......+.++.++||+++.+++|+.++|+++|||++++|+.+. .
T Consensus 40 PPgp~~~PiiGn~~~~~~~~~----------~---~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~ 106 (490)
T PLN02500 40 PPGNMGWPFLGETIGYLKPYS----------A---TSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGR 106 (490)
T ss_pred CCCCcCCCchhhHHHHHhhcc----------c---CChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCC
Confidence 569999999999876542110 0 0233567889999999999999999999999999999999643 3
Q ss_pred CCccch-HHHHhhhc-CCccccCchHHHHhhhhhcCCCCcccc
Q 039833 101 IFQEQR-SSVAKLLV-SGMVVYEGEQRLKVKKLTTPHFRLDKL 141 (142)
Q Consensus 101 ~~~k~~-~~~~~~~g-~gl~~~~g~~Wk~~Rk~l~p~F~~~~l 141 (142)
.|.+.. .....++| .++++++|+.||++|++++++|+..++
T Consensus 107 ~f~~~~~~~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l 149 (490)
T PLN02500 107 LFECSYPRSIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARL 149 (490)
T ss_pred eEEeeCchHHHHHhCcccccccCCHHHHHHHHHHHHhcChHHH
Confidence 564332 33344566 478889999999999999999987654
No 8
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.72 E-value=1.4e-17 Score=127.44 Aligned_cols=102 Identities=18% Similarity=0.233 Sum_probs=79.2
Q ss_pred CCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHhc-CC
Q 039833 22 FSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFKK-HD 100 (142)
Q Consensus 22 ~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~~-~~ 100 (142)
+|||+++|++||+.++... ....++.++.++||+++++++++.++|+++||+++++|+.+ .+
T Consensus 37 Ppgp~~~P~iG~~~~~~~~-----------------~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~ 99 (463)
T PLN02196 37 PPGTMGWPYVGETFQLYSQ-----------------DPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSH 99 (463)
T ss_pred CCCCCCCCccchHHHHHhc-----------------CHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCC
Confidence 4455568999998876431 12346789999999999999999999999999999999954 34
Q ss_pred CCccch--HHHHhhhc-CCccccCchHHHHhhhhhcCCCCcccc
Q 039833 101 IFQEQR--SSVAKLLV-SGMVVYEGEQRLKVKKLTTPHFRLDKL 141 (142)
Q Consensus 101 ~~~k~~--~~~~~~~g-~gl~~~~g~~Wk~~Rk~l~p~F~~~~l 141 (142)
.| ++. ......+| .|+++++|+.|+++||++++.|+.+++
T Consensus 100 ~~-~~~~~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l 142 (463)
T PLN02196 100 LF-KPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAI 142 (463)
T ss_pred cc-cccCchHHHHHcCcccccccCcHHHHHHHHHHHHhcChHHH
Confidence 55 332 22334556 478889999999999999999987664
No 9
>PLN02774 brassinosteroid-6-oxidase
Probab=99.72 E-value=8.3e-18 Score=128.74 Aligned_cols=109 Identities=17% Similarity=0.144 Sum_probs=84.3
Q ss_pred HHHHhcCC-CCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHH
Q 039833 15 KFIRDQGF-SGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVR 93 (142)
Q Consensus 15 ~~~~~~~~-pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik 93 (142)
+++.+.+. |||+++|++||+..+... ...++.++.++||+++.+++|+.++++++||++++
T Consensus 25 ~~~~r~~~ppgp~~~P~~G~~~~~~~~------------------~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~ 86 (463)
T PLN02774 25 VRYSKKGLPPGTMGWPLFGETTEFLKQ------------------GPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNR 86 (463)
T ss_pred hccCCCCCCCCCCCCCchhhHHHHHHh------------------hHHHHHHHHHHhccCccceecCCCeEEEeCHHHHH
Confidence 34455565 688889999998876531 12357888999999999999999999999999999
Q ss_pred HHHh-cCCCCccch-HHHHhhhcC-CccccCchHHHHhhhhhcCCCCcccc
Q 039833 94 EIFK-KHDIFQEQR-SSVAKLLVS-GMVVYEGEQRLKVKKLTTPHFRLDKL 141 (142)
Q Consensus 94 ~vl~-~~~~~~k~~-~~~~~~~g~-gl~~~~g~~Wk~~Rk~l~p~F~~~~l 141 (142)
+++. +.+.|.++. ....+++|. |+++++|+.|+.+|++++++|+...+
T Consensus 87 ~il~~~~~~~~~~~~~~~~~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~ 137 (463)
T PLN02774 87 YILMNEGKGLVPGYPQSMLDILGTCNIAAVHGSTHRYMRGSLLSLISPTMI 137 (463)
T ss_pred HHHcCCCCeEEecCCHHHHHHhCccchhhcCCHHHHHHHHHHHHhcCHHHH
Confidence 9995 444554333 333355664 78888999999999999999987654
No 10
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.71 E-value=3.1e-18 Score=132.67 Aligned_cols=103 Identities=13% Similarity=0.166 Sum_probs=78.6
Q ss_pred CCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHh-cC
Q 039833 21 GFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFK-KH 99 (142)
Q Consensus 21 ~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~-~~ 99 (142)
.+|||+++|++||+.++.. .....+.+|.++||+++++++|+.++|+++|||++++++. +.
T Consensus 35 ~pPgp~~~P~iG~~~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~ 96 (517)
T PLN02687 35 LPPGPRGWPVLGNLPQLGP------------------KPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHD 96 (517)
T ss_pred CCccCCCCCccccHHhcCC------------------chhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcc
Confidence 4678989999999877632 1234688999999999999999999999999999999995 44
Q ss_pred CCCccch-HH-HHhhh--cCC-ccccCchHHHHhhhhhc-CCCCcccc
Q 039833 100 DIFQEQR-SS-VAKLL--VSG-MVVYEGEQRLKVKKLTT-PHFRLDKL 141 (142)
Q Consensus 100 ~~~~k~~-~~-~~~~~--g~g-l~~~~g~~Wk~~Rk~l~-p~F~~~~l 141 (142)
+.|.++. .. ...+. +.+ +++.+|+.|+++||+++ ++|+.+++
T Consensus 97 ~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l 144 (517)
T PLN02687 97 ANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKAL 144 (517)
T ss_pred hhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHH
Confidence 5675433 22 22221 334 55567999999999998 89987654
No 11
>PLN00168 Cytochrome P450; Provisional
Probab=99.70 E-value=1.3e-17 Score=129.37 Aligned_cols=109 Identities=14% Similarity=0.249 Sum_probs=80.8
Q ss_pred hcCCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHh-
Q 039833 19 DQGFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFK- 97 (142)
Q Consensus 19 ~~~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~- 97 (142)
..-+|||+++|++||+..+.... ......+.+|.++||++|.+++|+.|+|+++|||++++++.
T Consensus 34 ~~lpPgp~~~pl~G~l~~~~~~~---------------~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~ 98 (519)
T PLN00168 34 RRLPPGPPAVPLLGSLVWLTNSS---------------ADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVE 98 (519)
T ss_pred CCCCcCCCCCcccccHHhhcccc---------------ccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHh
Confidence 33467999999999987653210 01235688999999999999999999999999999999995
Q ss_pred cCCCCc-cchHHHHhhhcC--Cccc--cCchHHHHhhh-hhcCCCCccccC
Q 039833 98 KHDIFQ-EQRSSVAKLLVS--GMVV--YEGEQRLKVKK-LTTPHFRLDKLK 142 (142)
Q Consensus 98 ~~~~~~-k~~~~~~~~~g~--gl~~--~~g~~Wk~~Rk-~l~p~F~~~~lk 142 (142)
+.+.|. ++......++|. +++. ++|+.|+++|| +++|+|+.++++
T Consensus 99 ~~~~f~~rp~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~ 149 (519)
T PLN00168 99 RGAALADRPAVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVR 149 (519)
T ss_pred cCCccccCCcccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHH
Confidence 445674 433222334542 4544 67999999986 799999987653
No 12
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.70 E-value=4.7e-17 Score=124.25 Aligned_cols=107 Identities=16% Similarity=0.210 Sum_probs=82.1
Q ss_pred CCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHhcC-C
Q 039833 22 FSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFKKH-D 100 (142)
Q Consensus 22 ~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~~~-~ 100 (142)
+|||.++|++||+.++..... ......++.+|.++||++|.+++|+.++|+++||++++++|.+. .
T Consensus 9 Ppg~~~~P~iG~~~~l~~~~~-------------~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~ 75 (452)
T PLN03141 9 PKGSLGWPVIGETLDFISCAY-------------SSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGN 75 (452)
T ss_pred CCCCCCCCchhhHHHHHhhcc-------------cCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCC
Confidence 468889999999988753100 00123567889999999999999999999999999999999644 3
Q ss_pred CCccch-HHHHhhhcC-CccccCchHHHHhhhhhcCCCCcccc
Q 039833 101 IFQEQR-SSVAKLLVS-GMVVYEGEQRLKVKKLTTPHFRLDKL 141 (142)
Q Consensus 101 ~~~k~~-~~~~~~~g~-gl~~~~g~~Wk~~Rk~l~p~F~~~~l 141 (142)
.|.... ..+..++|. |+++.+|+.||++|++++++|+..++
T Consensus 76 ~~~~~~~~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l 118 (452)
T PLN03141 76 AFVPAYPKSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHL 118 (452)
T ss_pred eeeccCchhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHH
Confidence 554332 334456774 68889999999999999999976544
No 13
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.70 E-value=5e-17 Score=125.90 Aligned_cols=107 Identities=21% Similarity=0.228 Sum_probs=84.2
Q ss_pred HHHhcCCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHh---CCeEEeecCCcCEEEEcCHHHH
Q 039833 16 FIRDQGFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNY---GKNSFIWMGPGPIINITDPKIV 92 (142)
Q Consensus 16 ~~~~~~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y---g~i~~~~~g~~~~vvv~dp~~i 92 (142)
.|+++++|||+++|++||+.++... + ..+.+|.++| |+++.+++|+.++|+++||+++
T Consensus 26 ~~~~~~~pgp~~~p~~G~~~~~~~~------------~-------~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~ 86 (516)
T PLN03195 26 RWSQRNRKGPKSWPIIGAALEQLKN------------Y-------DRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNV 86 (516)
T ss_pred HhhccccCCCCCCCeecchHHHHhc------------c-------chHHHHHHHHhccCCcEEEeeCCCCceEecCHHHH
Confidence 5677889999999999998765331 0 1245666666 7999999999999999999999
Q ss_pred HHHHhc-CCCCccch---HHHHhhhcCCccccCchHHHHhhhhhcCCCCcccc
Q 039833 93 REIFKK-HDIFQEQR---SSVAKLLVSGMVVYEGEQRLKVKKLTTPHFRLDKL 141 (142)
Q Consensus 93 k~vl~~-~~~~~k~~---~~~~~~~g~gl~~~~g~~Wk~~Rk~l~p~F~~~~l 141 (142)
++|+.+ ...|.+.. .....++|.|+++++|+.|+++||+++++|+.+++
T Consensus 87 ~~il~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~fs~~~l 139 (516)
T PLN03195 87 EHVLKTNFANYPKGEVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNL 139 (516)
T ss_pred HHHHhhCccccCCcHhHHHHHHHHhcCeeeccCcHHHHHHHHhcchhhhHHHH
Confidence 999954 34676654 12334568899999999999999999999997665
No 14
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.69 E-value=3.9e-17 Score=126.29 Aligned_cols=108 Identities=17% Similarity=0.139 Sum_probs=80.6
Q ss_pred HHHhcCCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHH
Q 039833 16 FIRDQGFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREI 95 (142)
Q Consensus 16 ~~~~~~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~v 95 (142)
+...+-+|||+++|++||+..+.. .....+.++.++||+++++++|+.++|+++|||+++++
T Consensus 27 ~~~~~~pPgp~~~Pl~G~l~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~v 88 (504)
T PLN00110 27 KPSRKLPPGPRGWPLLGALPLLGN------------------MPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAF 88 (504)
T ss_pred cccCCCcccCCCCCeeechhhcCC------------------chHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHH
Confidence 344445789999999999866531 11346888999999999999999999999999999999
Q ss_pred Hh-cCCCCccch--HHHH-hhhc--CCccccCchHHHHhhhhhcC-CCCcccc
Q 039833 96 FK-KHDIFQEQR--SSVA-KLLV--SGMVVYEGEQRLKVKKLTTP-HFRLDKL 141 (142)
Q Consensus 96 l~-~~~~~~k~~--~~~~-~~~g--~gl~~~~g~~Wk~~Rk~l~p-~F~~~~l 141 (142)
+. +.+.|.++. .... ...| .++++.+|+.|+++|+++++ .|+.+++
T Consensus 89 l~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l 141 (504)
T PLN00110 89 LKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKAL 141 (504)
T ss_pred HHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHH
Confidence 95 444675433 2121 2233 46777889999999999985 6876554
No 15
>PLN02971 tryptophan N-hydroxylase
Probab=99.69 E-value=6.6e-17 Score=126.01 Aligned_cols=100 Identities=25% Similarity=0.433 Sum_probs=76.6
Q ss_pred CCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhC-CeEEeecCCcCEEEEcCHHHHHHHHhc-
Q 039833 21 GFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYG-KNSFIWMGPGPIINITDPKIVREIFKK- 98 (142)
Q Consensus 21 ~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg-~i~~~~~g~~~~vvv~dp~~ik~vl~~- 98 (142)
-+|||+++|++||++++... . ..+..+.+|.++|| +++.+++|+.++|+++||+++++||.+
T Consensus 58 lPPGP~~lPiiGnl~~l~~~------------~----~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~ 121 (543)
T PLN02971 58 LPPGPTGFPIVGMIPAMLKN------------R----PVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQ 121 (543)
T ss_pred CCcCCCCCCcccchHHhccC------------C----cHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhc
Confidence 46799999999999877431 0 11345788999999 799999999999999999999999964
Q ss_pred CCCCccch-HHHHhhhcCC----ccccCchHHHHhhhhhcCCC
Q 039833 99 HDIFQEQR-SSVAKLLVSG----MVVYEGEQRLKVKKLTTPHF 136 (142)
Q Consensus 99 ~~~~~k~~-~~~~~~~g~g----l~~~~g~~Wk~~Rk~l~p~F 136 (142)
...|.++. ......+|.| ++.++|+.||++||++++.|
T Consensus 122 ~~~f~~rp~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l 164 (543)
T PLN02971 122 DALFASRPLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEI 164 (543)
T ss_pred chhhcCCCcccchhhccCCCCceEecCCcHHHHHHHHHHHHHh
Confidence 44675433 3333455544 67788999999999997654
No 16
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.67 E-value=2e-17 Score=127.98 Aligned_cols=104 Identities=16% Similarity=0.273 Sum_probs=78.5
Q ss_pred cCCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHh-c
Q 039833 20 QGFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFK-K 98 (142)
Q Consensus 20 ~~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~-~ 98 (142)
..+|||+++|++||+.++.. .....+.++.++||+++++++|+.+.|+++||+++++|+. +
T Consensus 32 ~~ppgp~~~pl~G~~~~~~~------------------~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~ 93 (514)
T PLN03112 32 RLPPGPPRWPIVGNLLQLGP------------------LPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQ 93 (514)
T ss_pred CCccCCCCCCeeeeHHhcCC------------------chHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhC
Confidence 34689999999999977632 1134678899999999999999999999999999999994 5
Q ss_pred CCCCccch-H-H-HHhhhcC--CccccCchHHHHhhhhh-cCCCCcccc
Q 039833 99 HDIFQEQR-S-S-VAKLLVS--GMVVYEGEQRLKVKKLT-TPHFRLDKL 141 (142)
Q Consensus 99 ~~~~~k~~-~-~-~~~~~g~--gl~~~~g~~Wk~~Rk~l-~p~F~~~~l 141 (142)
.+.|.+.. . . ....+|. +++.++|+.|+.+|+++ ++.|+.+++
T Consensus 94 ~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l 142 (514)
T PLN03112 94 DDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRL 142 (514)
T ss_pred CcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHH
Confidence 55775433 1 1 2223343 35667899999999995 568987654
No 17
>PLN02183 ferulate 5-hydroxylase
Probab=99.67 E-value=5.9e-17 Score=125.55 Aligned_cols=104 Identities=14% Similarity=0.219 Sum_probs=78.8
Q ss_pred cCCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHhc-
Q 039833 20 QGFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFKK- 98 (142)
Q Consensus 20 ~~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~~- 98 (142)
..+|||+++|++||+.++... ....+.+|.++||++|++++|+.++|+++||+++++|+.+
T Consensus 36 ~~ppgp~~~Pl~G~l~~~~~~------------------~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~ 97 (516)
T PLN02183 36 PYPPGPKGLPIIGNMLMMDQL------------------THRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQ 97 (516)
T ss_pred CCCcCCCCCCeeccHHhcCCc------------------chHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhh
Confidence 457899999999998765210 1235788999999999999999999999999999999954
Q ss_pred CCCCcc-ch-HHHHhhh---cCCccccCchHHHHhhhh-hcCCCCcccc
Q 039833 99 HDIFQE-QR-SSVAKLL---VSGMVVYEGEQRLKVKKL-TTPHFRLDKL 141 (142)
Q Consensus 99 ~~~~~k-~~-~~~~~~~---g~gl~~~~g~~Wk~~Rk~-l~p~F~~~~l 141 (142)
.+.|.+ +. .....+. +.++++++|+.|+++|++ ++++|+.+++
T Consensus 98 ~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l 146 (516)
T PLN02183 98 DSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRA 146 (516)
T ss_pred hhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHH
Confidence 446643 32 2222222 356777889999999998 5799987654
No 18
>PLN02655 ent-kaurene oxidase
Probab=99.66 E-value=2.2e-16 Score=121.02 Aligned_cols=100 Identities=12% Similarity=0.188 Sum_probs=74.9
Q ss_pred CCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHh-cCC
Q 039833 22 FSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFK-KHD 100 (142)
Q Consensus 22 ~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~-~~~ 100 (142)
+|||+++|++||+.++... .....+.+|.++||++|++++|+.++|+|+||+++++|+. +..
T Consensus 1 ppgp~~lP~iG~l~~~~~~-----------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~ 63 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEK-----------------KPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFS 63 (466)
T ss_pred CcCCCCCCccccHHHcCCC-----------------chhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCc
Confidence 4899999999999877421 1235689999999999999999999999999999999995 445
Q ss_pred CCccch--HHHHhhhcCC--ccccC-chHHHHhhhhhcCC-CCc
Q 039833 101 IFQEQR--SSVAKLLVSG--MVVYE-GEQRLKVKKLTTPH-FRL 138 (142)
Q Consensus 101 ~~~k~~--~~~~~~~g~g--l~~~~-g~~Wk~~Rk~l~p~-F~~ 138 (142)
.|.++. .....+.|.+ +++++ |+.|+++|+++.+. |+.
T Consensus 64 ~f~~r~~~~~~~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~ 107 (466)
T PLN02655 64 SISTRKLSKALTVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGA 107 (466)
T ss_pred hhcCCChhhHHHHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCc
Confidence 674433 3333344433 55554 99999999877654 554
No 19
>PLN02738 carotene beta-ring hydroxylase
Probab=99.66 E-value=3.3e-16 Score=123.85 Aligned_cols=115 Identities=15% Similarity=0.287 Sum_probs=88.0
Q ss_pred hHHHHHHHHhcCCCCCCCcc----------------ccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCe
Q 039833 10 PKKLEKFIRDQGFSGNSYKV----------------LLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKN 73 (142)
Q Consensus 10 ~~~~~~~~~~~~~pgP~~~p----------------l~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i 73 (142)
+..++..++++|+|||+-.- ..||+..+.. ..++..+.++.++||+|
T Consensus 105 ~~~~~~~~~~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i~~-----------------g~~~~~l~~lh~kYGpI 167 (633)
T PLN02738 105 PATLRNGLAKLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAVRG-----------------EAFFIPLYELFLTYGGI 167 (633)
T ss_pred hHHHHhhhhhCCCCCchHHHHHcccccccccccCccccCcHHHhcC-----------------chHHHHHHHHHHHhCCE
Confidence 45678899999999997321 2355544421 12345688999999999
Q ss_pred EEeecCCcCEEEEcCHHHHHHHHhc-CCCCccch--HHHHhhhcCCccccCchHHHHhhhhhcCCCCcccc
Q 039833 74 SFIWMGPGPIINITDPKIVREIFKK-HDIFQEQR--SSVAKLLVSGMVVYEGEQRLKVKKLTTPHFRLDKL 141 (142)
Q Consensus 74 ~~~~~g~~~~vvv~dp~~ik~vl~~-~~~~~k~~--~~~~~~~g~gl~~~~g~~Wk~~Rk~l~p~F~~~~l 141 (142)
+++++|+.++|+++||+++++|+.+ ...|.+.. .....+.|.|+++++|+.|+.+|++++|+|+...+
T Consensus 168 ~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l~p~Fs~~~v 238 (633)
T PLN02738 168 FRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYV 238 (633)
T ss_pred EEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhccHhhhHHHH
Confidence 9999999999999999999999964 34666653 22333457889999999999999999999987654
No 20
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.65 E-value=2.1e-16 Score=122.08 Aligned_cols=104 Identities=13% Similarity=0.242 Sum_probs=79.2
Q ss_pred CCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHh-cC
Q 039833 21 GFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFK-KH 99 (142)
Q Consensus 21 ~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~-~~ 99 (142)
.+|||++.|++||+.++... .....+.+|.++||+++++++|+.++|+++|||++++++. +.
T Consensus 31 ~pPgp~~~p~~g~l~~~~~~-----------------~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~ 93 (503)
T PLN02394 31 LPPGPAAVPIFGNWLQVGDD-----------------LNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQG 93 (503)
T ss_pred CCcCCCCCCeeeeHHhcCCC-----------------chhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCC
Confidence 56899999999998766321 0124678999999999999999999999999999999996 44
Q ss_pred CCCccch--HHHHhhhcC---CccccCchHHHHhhhhhc-CCCCcccc
Q 039833 100 DIFQEQR--SSVAKLLVS---GMVVYEGEQRLKVKKLTT-PHFRLDKL 141 (142)
Q Consensus 100 ~~~~k~~--~~~~~~~g~---gl~~~~g~~Wk~~Rk~l~-p~F~~~~l 141 (142)
..|.+.. .....+.|. +++.++|+.|+++||+++ |.|+.+++
T Consensus 94 ~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l 141 (503)
T PLN02394 94 VEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVV 141 (503)
T ss_pred ccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHH
Confidence 4564332 223334343 367788999999999996 88987654
No 21
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.64 E-value=8.9e-16 Score=118.04 Aligned_cols=103 Identities=20% Similarity=0.334 Sum_probs=77.9
Q ss_pred CCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCC--eEEeecCCcCEEEEcCHHHHHHHHhcC
Q 039833 22 FSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGK--NSFIWMGPGPIINITDPKIVREIFKKH 99 (142)
Q Consensus 22 ~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~--i~~~~~g~~~~vvv~dp~~ik~vl~~~ 99 (142)
+|||+++|++||+.++...... .....++.++.++||+ ++++++++.+.++++|||++++|+.+.
T Consensus 44 pPgp~~~PilG~l~~~~~~~~~-------------~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~ 110 (490)
T PLN02302 44 PPGDLGWPVIGNMWSFLRAFKS-------------SNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD 110 (490)
T ss_pred cCCCCCCCccccHHHHHHhccc-------------CCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC
Confidence 4788899999999887542110 0123567899999997 689999999999999999999999765
Q ss_pred CCCccch-HHHHhhhcC-CccccCchHHHHhhhhhcCCCC
Q 039833 100 DIFQEQR-SSVAKLLVS-GMVVYEGEQRLKVKKLTTPHFR 137 (142)
Q Consensus 100 ~~~~k~~-~~~~~~~g~-gl~~~~g~~Wk~~Rk~l~p~F~ 137 (142)
+.|.+.. ......+|. +++..+|+.|+++|++++++|+
T Consensus 111 ~~f~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~ 150 (490)
T PLN02302 111 DAFEPGWPESTVELIGRKSFVGITGEEHKRLRRLTAAPVN 150 (490)
T ss_pred CccccCCchhHHHHhccccccccCcHHHHHHHHHHHhccC
Confidence 6664332 222235564 4566789999999999999995
No 22
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.63 E-value=8e-16 Score=115.68 Aligned_cols=102 Identities=22% Similarity=0.434 Sum_probs=82.0
Q ss_pred CCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHhcCC-
Q 039833 22 FSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFKKHD- 100 (142)
Q Consensus 22 ~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~~~~- 100 (142)
+|||+++|++||+.++... . .....+.++.++||++|++++++.++++|+||+++++|+.+.+
T Consensus 1 Ppgp~~~p~~G~~~~~~~~-~---------------~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~ 64 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRK-G---------------NPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSK 64 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTT-H---------------HHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTT
T ss_pred CcCCCCcCceeEHHHhcCC-C---------------cHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccc
Confidence 4899999999999998731 0 1245688999999999999999999999999999999996443
Q ss_pred CCccch--HHH----HhhhcCCccccCchHHHHhhhhhcCCCCcc
Q 039833 101 IFQEQR--SSV----AKLLVSGMVVYEGEQRLKVKKLTTPHFRLD 139 (142)
Q Consensus 101 ~~~k~~--~~~----~~~~g~gl~~~~g~~Wk~~Rk~l~p~F~~~ 139 (142)
.+.... ..+ ....+.++++++|+.|+.+|++++++|+..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~ 109 (463)
T PF00067_consen 65 YFSFRPRPPWFEIFRGPFGGKGLFFSDGERWRRQRRLLAPAFSSK 109 (463)
T ss_dssp TEEEEHCHHHHHHHHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 554332 112 234578999999999999999999998865
No 23
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.62 E-value=5.5e-16 Score=119.10 Aligned_cols=101 Identities=22% Similarity=0.316 Sum_probs=77.5
Q ss_pred CCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHhc-CC
Q 039833 22 FSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFKK-HD 100 (142)
Q Consensus 22 ~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~~-~~ 100 (142)
+|||.++|++||++++...... .....++.++.++||+++.+++++.++|+++||+++++++.+ .+
T Consensus 32 ppgp~~~P~iG~~~~~~~~~~~-------------~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~ 98 (472)
T PLN02987 32 PPGSLGLPLVGETLQLISAYKT-------------ENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGK 98 (472)
T ss_pred cCCCcCCCchhhHHHHHhhccc-------------CChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCc
Confidence 4688889999999887431100 012346788999999999999999999999999999999964 44
Q ss_pred CCccch-HHHHhhhc-CCccccCchHHHHhhhhhcCC
Q 039833 101 IFQEQR-SSVAKLLV-SGMVVYEGEQRLKVKKLTTPH 135 (142)
Q Consensus 101 ~~~k~~-~~~~~~~g-~gl~~~~g~~Wk~~Rk~l~p~ 135 (142)
.|.++. ..+..++| .|+++++|+.|+++|+++.+.
T Consensus 99 ~f~~~~~~~~~~~lg~~~l~~~~g~~wr~~R~~~~~f 135 (472)
T PLN02987 99 LFECSYPGSISNLLGKHSLLLMKGNLHKKMHSLTMSF 135 (472)
T ss_pred eEEecCcHHHHHHhCcccccccCcHHHHHHHHHHHHh
Confidence 665443 33446667 589999999999999998753
No 24
>PLN03018 homomethionine N-hydroxylase
Probab=99.57 E-value=3.9e-15 Score=115.97 Aligned_cols=102 Identities=22% Similarity=0.251 Sum_probs=72.8
Q ss_pred CCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHh-CCeEEeecCCcCEEEEcCHHHHHHHHhc-C
Q 039833 22 FSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNY-GKNSFIWMGPGPIINITDPKIVREIFKK-H 99 (142)
Q Consensus 22 ~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-g~i~~~~~g~~~~vvv~dp~~ik~vl~~-~ 99 (142)
+|||+++|++||++++..... + ..++.++.++| |+++.+++|+.++|+++|||++++||.+ .
T Consensus 42 PPgp~~~P~iGnl~~l~~~~~----------~------~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~ 105 (534)
T PLN03018 42 PPGPPGWPILGNLPELIMTRP----------R------SKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERD 105 (534)
T ss_pred CcCCCCCCeeccHHHhccCCC----------c------chhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCc
Confidence 679999999999988742100 0 01234445555 7999999999999999999999999964 4
Q ss_pred CCCccch-HHHHhhhcC---CccccC-chHHHHhhhhhcCCCCcc
Q 039833 100 DIFQEQR-SSVAKLLVS---GMVVYE-GEQRLKVKKLTTPHFRLD 139 (142)
Q Consensus 100 ~~~~k~~-~~~~~~~g~---gl~~~~-g~~Wk~~Rk~l~p~F~~~ 139 (142)
+.|.++. ......++. ++++++ |+.|+++|+++++.|...
T Consensus 106 ~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~ 150 (534)
T PLN03018 106 ADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSV 150 (534)
T ss_pred HhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCH
Confidence 4675433 222233443 477665 999999999999987543
No 25
>PLN02936 epsilon-ring hydroxylase
Probab=99.56 E-value=1.2e-14 Score=112.18 Aligned_cols=106 Identities=16% Similarity=0.219 Sum_probs=83.1
Q ss_pred CCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHhcC-CC
Q 039833 23 SGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFKKH-DI 101 (142)
Q Consensus 23 pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~~~-~~ 101 (142)
-|-.++|++|+..+...... + ......+.+|.++||+++++++|+.+.++++|||++++|+++. +.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~ 81 (489)
T PLN02936 15 GDDSGIPVADAKLEDVTDLL----------G---GALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSK 81 (489)
T ss_pred CCCCCCccHHhHHhhHHHHh----------c---cHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhcccc
Confidence 46778999998776654221 0 1234578999999999999999999999999999999999653 57
Q ss_pred Cccch--HHHHhhhcCCccccCchHHHHhhhhhcCCCCcccc
Q 039833 102 FQEQR--SSVAKLLVSGMVVYEGEQRLKVKKLTTPHFRLDKL 141 (142)
Q Consensus 102 ~~k~~--~~~~~~~g~gl~~~~g~~Wk~~Rk~l~p~F~~~~l 141 (142)
|.++. .....++|.++++++|+.|+++||+++|+|+..++
T Consensus 82 f~~~~~~~~~~~~~~~~i~~~~g~~wk~~Rk~l~~~f~~~~l 123 (489)
T PLN02936 82 YAKGLVAEVSEFLFGSGFAIAEGELWTARRRAVVPSLHRRYL 123 (489)
T ss_pred ccCcchhhhhHHHhcCccccCCchHHHHHHHhhcCccCHHHH
Confidence 76543 22334568899999999999999999999986543
No 26
>PLN02966 cytochrome P450 83A1
Probab=99.55 E-value=3.3e-15 Score=115.48 Aligned_cols=104 Identities=15% Similarity=0.203 Sum_probs=77.0
Q ss_pred CCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHhc-C
Q 039833 21 GFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFKK-H 99 (142)
Q Consensus 21 ~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~~-~ 99 (142)
-+|||+++|++||+.++... .....+.+|.++||+++.+++|+.++|+++||+++++|+.+ .
T Consensus 30 ~ppgp~~~p~~G~l~~l~~~-----------------~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~ 92 (502)
T PLN02966 30 LPPGPSPLPVIGNLLQLQKL-----------------NPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQD 92 (502)
T ss_pred CCcCCCCCCeeccHHhcCCC-----------------ChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCc
Confidence 47899999999999776320 12356889999999999999999999999999999999954 4
Q ss_pred CCCccch-HHHHhh--hcC-Cc-cccCchHHHHhhhh-hcCCCCcccc
Q 039833 100 DIFQEQR-SSVAKL--LVS-GM-VVYEGEQRLKVKKL-TTPHFRLDKL 141 (142)
Q Consensus 100 ~~~~k~~-~~~~~~--~g~-gl-~~~~g~~Wk~~Rk~-l~p~F~~~~l 141 (142)
..|.+.. ...... .|. ++ +..+|+.|+.+|++ ++++|+..++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l 140 (502)
T PLN02966 93 VNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRV 140 (502)
T ss_pred ccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHH
Confidence 4665332 111112 232 23 44669999999999 8899987654
No 27
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.53 E-value=1e-14 Score=112.60 Aligned_cols=105 Identities=12% Similarity=0.159 Sum_probs=76.4
Q ss_pred cCCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHhc-
Q 039833 20 QGFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFKK- 98 (142)
Q Consensus 20 ~~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~~- 98 (142)
+.+|||+++|++||+.++... ....++.++.++||+++++++|+.++|+++|||++++|+.+
T Consensus 28 ~~pPgp~~~P~iG~~~~~~~~-----------------~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~ 90 (499)
T PLN03234 28 RLPPGPKGLPIIGNLHQMEKF-----------------NPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQ 90 (499)
T ss_pred CCCcCCCCCCeeccHHhcCCC-----------------CccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhC
Confidence 457899999999998776320 11246788899999999999999999999999999999954
Q ss_pred CCCCccch--HHHH--hhhcCCc-cccCchHHHHhhhhh-cCCCCcccc
Q 039833 99 HDIFQEQR--SSVA--KLLVSGM-VVYEGEQRLKVKKLT-TPHFRLDKL 141 (142)
Q Consensus 99 ~~~~~k~~--~~~~--~~~g~gl-~~~~g~~Wk~~Rk~l-~p~F~~~~l 141 (142)
...|.+.. .... ...|.++ +...|+.|+++|+.+ ++.|+.+++
T Consensus 91 ~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l 139 (499)
T PLN03234 91 DLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRV 139 (499)
T ss_pred CccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHH
Confidence 44665432 2111 1223333 334579999999985 699987654
No 28
>PLN02648 allene oxide synthase
Probab=99.37 E-value=1.9e-13 Score=105.25 Aligned_cols=104 Identities=18% Similarity=0.192 Sum_probs=78.1
Q ss_pred CCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCC-eEEeecCCcCE-------EEEcCHHHH
Q 039833 21 GFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGK-NSFIWMGPGPI-------INITDPKIV 92 (142)
Q Consensus 21 ~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~-i~~~~~g~~~~-------vvv~dp~~i 92 (142)
.+||+.++|++|+..++...... .....++.+..++||+ +|+..+++.|+ |+++|||++
T Consensus 18 ~PPg~~g~P~iG~~~~~~~~~~~-------------~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~ 84 (480)
T PLN02648 18 EIPGSYGLPFLGAIKDRLDYFYF-------------QGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSF 84 (480)
T ss_pred CCCCCCCCcCcchhhhhhhHHHh-------------cChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCce
Confidence 46788889999999876542110 1123578888899998 99999988766 999999999
Q ss_pred HHHHhc----CC-CCccch-HHHHhhhc-C---CccccCchHHHHhhhhhcCCCCc
Q 039833 93 REIFKK----HD-IFQEQR-SSVAKLLV-S---GMVVYEGEQRLKVKKLTTPHFRL 138 (142)
Q Consensus 93 k~vl~~----~~-~~~k~~-~~~~~~~g-~---gl~~~~g~~Wk~~Rk~l~p~F~~ 138 (142)
+.||++ .+ .+.... .... ++| + +++..+|+.|+++|+++.++|+.
T Consensus 85 ~~v~~~~~~~~~~~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~~ 139 (480)
T PLN02648 85 PVLFDVSKVDKRDVFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLKS 139 (480)
T ss_pred eeeecchhccccccceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHHH
Confidence 999964 22 344333 3343 777 4 67778999999999999999973
No 29
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.24 E-value=3.8e-11 Score=91.50 Aligned_cols=102 Identities=13% Similarity=0.215 Sum_probs=79.5
Q ss_pred CCCCCCCccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEee-cCCcCEEEEcCHHHHHHHHhcC
Q 039833 21 GFSGNSYKVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIW-MGPGPIINITDPKIVREIFKKH 99 (142)
Q Consensus 21 ~~pgP~~~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~-~g~~~~vvv~dp~~ik~vl~~~ 99 (142)
-||||+.+|++|.+..+..... ...++......++||+||+.. +|+...|.+.||++++.++.++
T Consensus 51 ~IP~p~~~~~l~~l~~~~~~~~--------------~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~E 116 (519)
T KOG0159|consen 51 EIPGPKGLPFLGLLWIWRAGGA--------------TKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNE 116 (519)
T ss_pred hcCCCCCccHHHHHHHHHhhhh--------------hHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcC
Confidence 3799999999998876433211 234566788889999999999 8899999999999999999877
Q ss_pred CCCc-cc-h----HHHHhhhc--CCccccCchHHHHhhhhhcCCC
Q 039833 100 DIFQ-EQ-R----SSVAKLLV--SGMVVYEGEQRLKVKKLTTPHF 136 (142)
Q Consensus 100 ~~~~-k~-~----~~~~~~~g--~gl~~~~g~~Wk~~Rk~l~p~F 136 (142)
+.++ ++ . ..-.+..+ .|+++.+|++|++.|..++|..
T Consensus 117 G~~P~Rp~~~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~l 161 (519)
T KOG0159|consen 117 GKYPFRPLLIEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLL 161 (519)
T ss_pred CCCCCcccccchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhh
Confidence 6553 43 1 22334453 7999999999999999999875
No 30
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.15 E-value=1.3e-10 Score=90.20 Aligned_cols=78 Identities=13% Similarity=0.234 Sum_probs=60.4
Q ss_pred HHHHHHHHhC-CeEEeecCCcCEEEEcCHHHHHHHHh-cCCCCccch---HHHHhhhcCCccccCchHHHHhhhhhcCCC
Q 039833 62 FHHHIITNYG-KNSFIWMGPGPIINITDPKIVREIFK-KHDIFQEQR---SSVAKLLVSGMVVYEGEQRLKVKKLTTPHF 136 (142)
Q Consensus 62 ~~~~~~~~yg-~i~~~~~g~~~~vvv~dp~~ik~vl~-~~~~~~k~~---~~~~~~~g~gl~~~~g~~Wk~~Rk~l~p~F 136 (142)
.+.++.++++ .++.++..+. ++++|||++++|+. +.+.|.|+. ..+.+++|+|+++++|+.|+++||+++|+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi~~~~g~~wk~~Rk~l~~~f 142 (502)
T PLN02426 65 WYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIFNVDGDSWRFQRKMASLEL 142 (502)
T ss_pred HHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCceeecCcHHHHHHHHHhHhhh
Confidence 4555677776 4667665443 89999999999995 456787764 234566799999999999999999999999
Q ss_pred Ccccc
Q 039833 137 RLDKL 141 (142)
Q Consensus 137 ~~~~l 141 (142)
+..++
T Consensus 143 s~~~l 147 (502)
T PLN02426 143 GSVSI 147 (502)
T ss_pred hhHHH
Confidence 87654
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.17 E-value=3.4e-06 Score=63.98 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=72.0
Q ss_pred ccccCCHHHHHHHhhhhcCCCCccccccccChhHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHhcC-CCCc--c
Q 039833 28 KVLLGDMRELAKTTKDAESKPIGLSDNIAQPILPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFKKH-DIFQ--E 104 (142)
Q Consensus 28 ~pl~Gn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~~~-~~~~--k 104 (142)
.|++|++.++.+ ...+++.+..++||+||.+.++++.+-++.+|+....++... ..++ .
T Consensus 40 iP~lG~a~~fgk------------------~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~ 101 (486)
T KOG0684|consen 40 IPWLGSALAFGK------------------DPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEE 101 (486)
T ss_pred cchhhHHHHhcc------------------CHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHH
Confidence 489999887754 235689999999999999999999999999999999999533 3332 2
Q ss_pred ch-HHHHhhhcCCccc-cCchHHHHhhhhhcCCCCcccc
Q 039833 105 QR-SSVAKLLVSGMVV-YEGEQRLKVKKLTTPHFRLDKL 141 (142)
Q Consensus 105 ~~-~~~~~~~g~gl~~-~~g~~Wk~~Rk~l~p~F~~~~l 141 (142)
-. ....+.+|.|+.. .++..-.++-+++..++...++
T Consensus 102 ~~~~l~~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~l 140 (486)
T KOG0684|consen 102 AYSKLTTPVFGKGVVYDVPNHVMMEQKKFFKSALGGVAL 140 (486)
T ss_pred HHHHhhhhhcCCCccccCCCchHHHHHHHHHHHhchhhH
Confidence 22 3355778988765 4577777787777777665544
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.98 E-value=6.2e-06 Score=62.80 Aligned_cols=77 Identities=19% Similarity=0.368 Sum_probs=55.3
Q ss_pred HHHHHhCCeEEeecCCc--CEEEEcCHHHHHHHHhcCCCCccch-----HH-HHhhhcCC-ccccCchHHHHhhhhhcCC
Q 039833 65 HIITNYGKNSFIWMGPG--PIINITDPKIVREIFKKHDIFQEQR-----SS-VAKLLVSG-MVVYEGEQRLKVKKLTTPH 135 (142)
Q Consensus 65 ~~~~~yg~i~~~~~g~~--~~vvv~dp~~ik~vl~~~~~~~k~~-----~~-~~~~~g~g-l~~~~g~~Wk~~Rk~l~p~ 135 (142)
.+.+.||.++.++..+. ..+++++++.+++++.+...+.+.. .. ....+|.+ +++.+|+.|+++||+++++
T Consensus 30 ~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rkl~~~~ 109 (411)
T COG2124 30 RAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKLLAPA 109 (411)
T ss_pred HHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcccccccccccccccchhhhccccceeecCCHHHHHHHHHhccc
Confidence 34556777666655433 3799999999999996543222211 11 34566766 8889999999999999999
Q ss_pred CCcccc
Q 039833 136 FRLDKL 141 (142)
Q Consensus 136 F~~~~l 141 (142)
|+++.+
T Consensus 110 F~~~~~ 115 (411)
T COG2124 110 FTPRAL 115 (411)
T ss_pred cCHHHH
Confidence 998765
No 33
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=67.10 E-value=19 Score=22.79 Aligned_cols=37 Identities=14% Similarity=0.296 Sum_probs=28.0
Q ss_pred hHHHHHHHHHhCCeEEeecCCcCEEEEcCHHHHHHHHhc
Q 039833 60 LPFHHHIITNYGKNSFIWMGPGPIINITDPKIVREIFKK 98 (142)
Q Consensus 60 ~~~~~~~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~~ 98 (142)
...+.+|.++||.+-.. .+...+.+.|++.+++++.+
T Consensus 77 ~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~ 113 (129)
T PF13625_consen 77 EQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLAD 113 (129)
T ss_pred HHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhC
Confidence 45688999999986542 24557778899999999854
No 34
>cd01646 RT_Bac_retron_I RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.
Probab=36.13 E-value=63 Score=21.04 Aligned_cols=27 Identities=11% Similarity=0.030 Sum_probs=16.5
Q ss_pred hCCeEEeecCCcCEEEEcCHHHHHHHH
Q 039833 70 YGKNSFIWMGPGPIINITDPKIVREIF 96 (142)
Q Consensus 70 yg~i~~~~~g~~~~vvv~dp~~ik~vl 96 (142)
.+.+...+....-+++..+.+.+++++
T Consensus 80 ~~~~~~~RY~DD~~i~~~~~~~~~~~~ 106 (158)
T cd01646 80 LKGVDYVRYVDDIRIFADSKEEAEEIL 106 (158)
T ss_pred cCCceEEEecCcEEEEcCCHHHHHHHH
Confidence 445555565656566667777665555
No 35
>PRK02302 hypothetical protein; Provisional
Probab=33.28 E-value=1.1e+02 Score=18.41 Aligned_cols=31 Identities=10% Similarity=0.190 Sum_probs=21.5
Q ss_pred HHHhCCeEEeecCCcCEEEEcCHHHHHHHHh
Q 039833 67 ITNYGKNSFIWMGPGPIINITDPKIVREIFK 97 (142)
Q Consensus 67 ~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~ 97 (142)
.++||++....=-.+-+++=+|-+.+.++..
T Consensus 23 LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~ 53 (89)
T PRK02302 23 LSKYGDIVYHSKRSRYLVLYVNKEDVEQKLE 53 (89)
T ss_pred HhhcCcEEEEeccccEEEEEECHHHHHHHHH
Confidence 3679998765433344566678888888884
No 36
>PHA01327 hypothetical protein
Probab=33.16 E-value=17 Score=18.40 Aligned_cols=18 Identities=17% Similarity=0.193 Sum_probs=12.8
Q ss_pred CCccccCchHHHHhhhhh
Q 039833 115 SGMVVYEGEQRLKVKKLT 132 (142)
Q Consensus 115 ~gl~~~~g~~Wk~~Rk~l 132 (142)
++++...|+.|+..|.-+
T Consensus 12 ~~vinehge~wqer~drm 29 (49)
T PHA01327 12 NNVINEHGEEWQERKDRM 29 (49)
T ss_pred chHHHhhHHHHHHHHHHH
Confidence 456666799999877543
No 37
>PRK02886 hypothetical protein; Provisional
Probab=31.54 E-value=1.2e+02 Score=18.14 Aligned_cols=31 Identities=13% Similarity=0.239 Sum_probs=21.6
Q ss_pred HHHhCCeEEeecCCcCEEEEcCHHHHHHHHh
Q 039833 67 ITNYGKNSFIWMGPGPIINITDPKIVREIFK 97 (142)
Q Consensus 67 ~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~ 97 (142)
.++||+|....=-..-+++=+|-+.+.+++.
T Consensus 21 LrkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~ 51 (87)
T PRK02886 21 LRKFGNVHYVSKRLKYAVLYCDMEQVEDIMN 51 (87)
T ss_pred HhhcCcEEEEeccccEEEEEECHHHHHHHHH
Confidence 3679998765433344666678888888884
No 38
>KOG4241 consensus Mitochondrial ribosomal protein L10 [Translation, ribosomal structure and biogenesis]
Probab=29.97 E-value=41 Score=23.63 Aligned_cols=28 Identities=18% Similarity=0.393 Sum_probs=23.0
Q ss_pred hCCeEEeecCCcCEEEEcCHHHHHHHHh
Q 039833 70 YGKNSFIWMGPGPIINITDPKIVREIFK 97 (142)
Q Consensus 70 yg~i~~~~~g~~~~vvv~dp~~ik~vl~ 97 (142)
|..+.-+..|+..++++.|++.+++++.
T Consensus 136 y~~l~plfvgnh~ill~~d~~kik~~lr 163 (245)
T KOG4241|consen 136 YSSLNPLFVGNHAILLAKDISKIKSILR 163 (245)
T ss_pred hhhhhhheeccceEEEcCChHHHHHHHH
Confidence 4555556778899999999999999994
No 39
>PF08599 Nbs1_C: DNA damage repair protein Nbs1; InterPro: IPR013908 This C-terminal region of the DNA damage repair protein Nbs1 has been identified to be necessary for the binding of Mre11 and Tel1 [].
Probab=29.65 E-value=35 Score=18.98 Aligned_cols=22 Identities=14% Similarity=0.216 Sum_probs=16.3
Q ss_pred HHHHHhcCCCCCCCcc-ccCCHH
Q 039833 14 EKFIRDQGFSGNSYKV-LLGDMR 35 (142)
Q Consensus 14 ~~~~~~~~~pgP~~~p-l~Gn~~ 35 (142)
.+.+++.-.||...+| |||-..
T Consensus 4 FKkFkKv~~pGa~~lP~IIGGSD 26 (65)
T PF08599_consen 4 FKKFKKVAYPGAGGLPHIIGGSD 26 (65)
T ss_pred hhhhcccccCCCCCCCeeecchh
Confidence 4567778889998898 777543
No 40
>PF08675 RNA_bind: RNA binding domain; InterPro: IPR014789 This domain corresponds to the RNA binding domain of Poly(A)-specific ribonuclease (PARN). ; GO: 0003723 RNA binding, 0004535 poly(A)-specific ribonuclease activity, 0046872 metal ion binding, 0006402 mRNA catabolic process, 0005634 nucleus, 0005737 cytoplasm; PDB: 3CTR_A 2ROK_A 3D45_B 1WHV_A.
Probab=27.54 E-value=72 Score=19.01 Aligned_cols=34 Identities=6% Similarity=0.348 Sum_probs=25.5
Q ss_pred HHHHHHHhCCeEEeecCCc-CEEEEcCHHHHHHHH
Q 039833 63 HHHIITNYGKNSFIWMGPG-PIINITDPKIVREIF 96 (142)
Q Consensus 63 ~~~~~~~yg~i~~~~~g~~-~~vvv~dp~~ik~vl 96 (142)
+.++..-||.|...|+... -.|.+.+.|.++.++
T Consensus 25 I~qlFspfG~I~VsWi~dTSAfV~l~~r~~~~~v~ 59 (87)
T PF08675_consen 25 IYQLFSPFGQIYVSWINDTSAFVALHNRDQAKVVM 59 (87)
T ss_dssp HHHHCCCCCCEEEEEECTTEEEEEECCCHHHHHHH
T ss_pred HHHHhccCCcEEEEEEcCCcEEEEeecHHHHHHHH
Confidence 3344455799999999754 567778999999887
No 41
>cd01648 TERT TERT: Telomerase reverse transcriptase (TERT). Telomerase is a ribonucleoprotein (RNP) that synthesizes telomeric DNA repeats. The telomerase RNA subunit provides the template for synthesis of these repeats. The catalytic subunit of RNP is known as telomerase reverse transcriptase (TERT). The reverse transcriptase (RT) domain is located in the C-terminal region of the TERT polypeptide. Single amino acid substitutions in this region lead to telomere shortening and senescence. Telomerase is an enzyme that, in certain cells, maintains the physical ends of chromosomes (telomeres) during replication. In somatic cells, replication of the lagging strand requires the continual presence of an RNA primer approximately 200 nucleotides upstream, which is complementary to the template strand. Since there is a region of DNA less than 200 base pairs from the end of the chromosome where this is not possible, the chromosome is continually shortened. However, a surplus of repetitive DNA at
Probab=27.34 E-value=1.6e+02 Score=18.20 Aligned_cols=19 Identities=21% Similarity=0.483 Sum_probs=12.2
Q ss_pred HHHhcCCC-CCCCccccCCH
Q 039833 16 FIRDQGFS-GNSYKVLLGDM 34 (142)
Q Consensus 16 ~~~~~~~p-gP~~~pl~Gn~ 34 (142)
+...+|+| |.+-.|++.|+
T Consensus 14 ~~~~~GlpQG~~lSp~L~nl 33 (119)
T cd01648 14 YRQKVGIPQGSPLSSLLCSL 33 (119)
T ss_pred hhhcCcccCCcchHHHHHHH
Confidence 34566776 66666777665
No 42
>PF08780 NTase_sub_bind: Nucleotidyltransferase substrate binding protein like; InterPro: IPR010235 The member of this family from Haemophilus influenzae, HI0074, has been shown by crystal structure to resemble nucleotidyltransferase substrate binding proteins []. It forms a complex with HI0073 (P43933 from SWISSPROT), encoded by the adjacent gene, which contains a nucleotidyltransferase nucleotide binding domain (IPR002934 from INTERPRO). Double- and single-stranded DNA binding assays showed no evidence of DNA binding to HI0074 or to HI0073/HI0074 complex despite the suggestive shape of the putative binding cleft formed by the HI0074 dimer []. ; PDB: 1WWP_A 1JOG_A 1WTY_C 2YWA_B.
Probab=24.47 E-value=1.2e+02 Score=19.13 Aligned_cols=20 Identities=20% Similarity=0.401 Sum_probs=12.2
Q ss_pred HHhhhcCCccccCchHHHHhh
Q 039833 109 VAKLLVSGMVVYEGEQRLKVK 129 (142)
Q Consensus 109 ~~~~~g~gl~~~~g~~Wk~~R 129 (142)
+..-+..|++ .+++.|...+
T Consensus 66 ~r~A~~~glI-~d~e~Wl~m~ 85 (124)
T PF08780_consen 66 FREAFKAGLI-DDGEIWLDML 85 (124)
T ss_dssp HHHHHHTTSS-SHHHHHHHHH
T ss_pred HHHHHHcCCC-CCHHHHHHHH
Confidence 3344456666 6778887654
No 43
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=23.83 E-value=32 Score=23.40 Aligned_cols=13 Identities=15% Similarity=0.059 Sum_probs=10.6
Q ss_pred hcCCCCCCCcccc
Q 039833 19 DQGFSGNSYKVLL 31 (142)
Q Consensus 19 ~~~~pgP~~~pl~ 31 (142)
+.|+|.||+.|++
T Consensus 11 ~LgV~HPPGyPlf 23 (178)
T PF11028_consen 11 KLGVPHPPGYPLF 23 (178)
T ss_pred hcCCCCCCCcHHH
Confidence 5699999999854
No 44
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.68 E-value=1.9e+02 Score=17.39 Aligned_cols=33 Identities=12% Similarity=0.262 Sum_probs=23.4
Q ss_pred HHHHhCCeEEeecCCcCEEEEcCHHHHHHHHhc
Q 039833 66 IITNYGKNSFIWMGPGPIINITDPKIVREIFKK 98 (142)
Q Consensus 66 ~~~~yg~i~~~~~g~~~~vvv~dp~~ik~vl~~ 98 (142)
-.++||++....=-.+-.++-++-+.+.+++.+
T Consensus 21 qLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k 53 (90)
T COG4471 21 QLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK 53 (90)
T ss_pred HHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence 346799987654334556666889999999953
No 45
>PF11616 EZH2_WD-Binding: WD repeat binding protein EZH2; InterPro: IPR021654 This family of proteins represents Enhancer of zest homologue 2, (EZH2) a 30 residue peptide which binds to a WD-repeat domain of EED by residues 39-68. EED is a component of PRC2 complex which is involved in gene expression []. This interaction is required for the HMTase activity of PCR2 []. ; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 2QXV_B.
Probab=21.98 E-value=48 Score=15.48 Aligned_cols=7 Identities=29% Similarity=0.444 Sum_probs=3.6
Q ss_pred hHHHHhh
Q 039833 123 EQRLKVK 129 (142)
Q Consensus 123 ~~Wk~~R 129 (142)
++|+..|
T Consensus 20 ~eWk~lR 26 (30)
T PF11616_consen 20 EEWKKLR 26 (30)
T ss_dssp HHHHH--
T ss_pred HHHHHhc
Confidence 5777766
No 46
>PF07203 DUF1412: Protein of unknown function (DUF1412); InterPro: IPR009853 This family consists of several Caenorhabditis elegans proteins of around 70-75 residues in length. The function of this family is unknown.
Probab=20.20 E-value=47 Score=17.56 Aligned_cols=16 Identities=19% Similarity=0.220 Sum_probs=14.0
Q ss_pred hHHHHhhhhhcCCCCc
Q 039833 123 EQRLKVKKLTTPHFRL 138 (142)
Q Consensus 123 ~~Wk~~Rk~l~p~F~~ 138 (142)
--|.+.+...+|.|++
T Consensus 34 lGWaQVph~~SPmfsP 49 (53)
T PF07203_consen 34 LGWAQVPHVYSPMFSP 49 (53)
T ss_pred cchhhCccccCccccc
Confidence 3599999999999986
No 47
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=20.06 E-value=1.5e+02 Score=15.19 Aligned_cols=33 Identities=6% Similarity=0.137 Sum_probs=20.8
Q ss_pred HHHHHhCCeEEeecCC----cCEEEEcCHHHHHHHHh
Q 039833 65 HIITNYGKNSFIWMGP----GPIINITDPKIVREIFK 97 (142)
Q Consensus 65 ~~~~~yg~i~~~~~g~----~~~vvv~dp~~ik~vl~ 97 (142)
+...+||+|-.+.+.. .-.|--.+++.++...+
T Consensus 3 ~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~ 39 (56)
T PF13893_consen 3 KLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE 39 (56)
T ss_dssp HHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred HHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 4457899987766533 23444468888888774
Done!