Query 039834
Match_columns 100
No_of_seqs 125 out of 741
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 03:16:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039834.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039834hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2v33a1 b.1.18.4 (A:293-382) F 52.6 1.5 0.00011 26.6 0.1 25 74-99 19-43 (90)
2 d2gsva1 a.23.7.1 (A:3-69) Hypo 32.6 8.6 0.00063 21.5 1.3 9 57-65 26-34 (67)
3 d2v5pc1 g.1.1.1 (C:6-63) Insul 25.3 32 0.0023 18.6 2.9 37 21-57 6-54 (58)
4 d1wqji1 g.1.1.1 (I:2-63) Insul 24.8 25 0.0018 19.3 2.4 13 21-33 7-19 (62)
5 d2dlka1 g.37.1.1 (A:8-37) Zinc 22.9 13 0.00097 17.5 0.8 12 72-83 2-13 (30)
6 d1ijva_ g.9.1.1 (A:) Beta-defe 14.6 25 0.0018 17.2 0.7 12 41-52 8-20 (36)
7 d1ijda_ f.3.1.1 (A:) Light-har 13.7 8.9 0.00065 20.2 -1.3 14 7-20 3-16 (46)
8 g1mso.1 g.1.1.1 (B:,A:) Insuli 13.3 45 0.0033 17.6 1.6 39 18-56 6-48 (51)
9 d1nkza_ f.3.1.1 (A:) Light-har 13.2 12 0.00086 20.2 -0.9 14 7-20 3-16 (53)
10 d1cc5a_ a.3.1.1 (A:) Cytochrom 11.4 73 0.0053 16.8 2.2 15 16-30 66-80 (83)
No 1
>d2v33a1 b.1.18.4 (A:293-382) Fusion glycoprotein E1 {Semliki forest virus [TaxId: 11033]}
Probab=52.64 E-value=1.5 Score=26.59 Aligned_cols=25 Identities=16% Similarity=0.310 Sum_probs=18.7
Q ss_pred cCCCceeEEecCCCCCCceecCCCCC
Q 039834 74 DFNNSGLIVAANDPSFGSCTYPGPEQ 99 (100)
Q Consensus 74 dF~G~a~i~~~~~ps~~~C~~~~~~~ 99 (100)
||+|.|+|+...|- .|.|..++..+
T Consensus 19 DfGGvatl~Y~a~k-~GkCaVHs~S~ 43 (90)
T d2v33a1 19 DFGGVLTLTYKTNK-NGDCSVHSHSN 43 (90)
T ss_dssp EEEEEEEEEEEESS-CEEEEEECCCS
T ss_pred CcCCeEEEEEecCC-CccceeEcCCC
Confidence 89999999984444 58897766543
No 2
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=32.59 E-value=8.6 Score=21.51 Aligned_cols=9 Identities=56% Similarity=0.973 Sum_probs=7.5
Q ss_pred HHHHHHHHH
Q 039834 57 FAMNLYYQN 65 (100)
Q Consensus 57 ya~N~YYq~ 65 (100)
-|||.||..
T Consensus 26 hAmNaYYrs 34 (67)
T d2gsva1 26 HAMNSYYRS 34 (67)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 489999985
No 3
>d2v5pc1 g.1.1.1 (C:6-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.29 E-value=32 Score=18.64 Aligned_cols=37 Identities=19% Similarity=0.383 Sum_probs=21.3
Q ss_pred HHHHHHHHhhcCcc--c-CcccCCC-----CC----CCCCCCchhhhhH
Q 039834 21 QLLQSNIDFACQKV--D-CSPIKSG-----GA----CFDPNTPMHHASF 57 (100)
Q Consensus 21 ~~l~~~ld~aCg~~--d-C~~I~~~-----g~----cys~ct~~~~aSy 57 (100)
..|-++|-++||.. - =.+.... |- |+.+|++.+--+|
T Consensus 6 s~LVdaL~~VCg~rGfy~~~~~~~~~r~~rGIVeeCC~~~C~l~~Le~Y 54 (58)
T d2v5pc1 6 GELVDTLQFVCGDRGFYFSRPASRVSRRSRGIVEECCFRSCDLALLETY 54 (58)
T ss_dssp HHHHHHHHHHSTTSCBCCCC----------CHHHHHTSSCCCSHHHHTT
T ss_pred HHHHHHHHHHHcCCCccccCCccccCCCCCCchhhcCCCCCCHHHHHHh
Confidence 56888999999871 1 1111111 11 8999988765443
No 4
>d1wqji1 g.1.1.1 (I:2-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.75 E-value=25 Score=19.33 Aligned_cols=13 Identities=23% Similarity=0.552 Sum_probs=11.2
Q ss_pred HHHHHHHHhhcCc
Q 039834 21 QLLQSNIDFACQK 33 (100)
Q Consensus 21 ~~l~~~ld~aCg~ 33 (100)
..|-++|-++||.
T Consensus 7 s~LvdaL~~VCG~ 19 (62)
T d1wqji1 7 AELVDALQFVCGD 19 (62)
T ss_dssp HHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHcc
Confidence 5688999999987
No 5
>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.91 E-value=13 Score=17.49 Aligned_cols=12 Identities=42% Similarity=0.910 Sum_probs=9.9
Q ss_pred cccCCCceeEEe
Q 039834 72 SCDFNNSGLIVA 83 (100)
Q Consensus 72 aCdF~G~a~i~~ 83 (100)
.|||.|-+.|-+
T Consensus 2 ~cdf~gc~kifs 13 (30)
T d2dlka1 2 PCDFPGCGRIFS 13 (30)
T ss_dssp ECSSTTTCCEES
T ss_pred CCCCCCchhhhc
Confidence 499999998865
No 6
>d1ijva_ g.9.1.1 (A:) Beta-defensin, BD {Human (Homo sapiens), HBD1 [TaxId: 9606]}
Probab=14.59 E-value=25 Score=17.19 Aligned_cols=12 Identities=33% Similarity=0.830 Sum_probs=8.0
Q ss_pred CCCCC-CCCCCch
Q 039834 41 SGGAC-FDPNTPM 52 (100)
Q Consensus 41 ~~g~c-ys~ct~~ 52 (100)
.||+| ||||-+.
T Consensus 8 ~gg~c~~s~cpl~ 20 (36)
T d1ijva_ 8 SGGQCLYSACPIF 20 (36)
T ss_dssp TTCEEESSCCCTT
T ss_pred CCceeccccCcce
Confidence 56776 7888653
No 7
>d1ijda_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodoblastus acidophilus [TaxId: 1074]}
Probab=13.72 E-value=8.9 Score=20.16 Aligned_cols=14 Identities=29% Similarity=0.527 Sum_probs=10.8
Q ss_pred CCceeeEeCCCCCH
Q 039834 7 TERTWCVAKPATSD 20 (100)
Q Consensus 7 ~~~~wCV~~~~~~~ 20 (100)
.++.|+|+||.+-.
T Consensus 3 ~gkiW~VV~PtvG~ 16 (46)
T d1ijda_ 3 QGKIWTVVPPAFGL 16 (46)
T ss_dssp TGGGGGTSCHHHHH
T ss_pred CceEEEEECCCcCc
Confidence 47899999987643
No 8
>g1mso.1 g.1.1.1 (B:,A:) Insulin {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.28 E-value=45 Score=17.57 Aligned_cols=39 Identities=10% Similarity=0.113 Sum_probs=13.7
Q ss_pred CCHHHHHHHHHhhcCcccCcccCCCCC----CCCCCCchhhhh
Q 039834 18 TSDQLLQSNIDFACQKVDCSPIKSGGA----CFDPNTPMHHAS 56 (100)
Q Consensus 18 ~~~~~l~~~ld~aCg~~dC~~I~~~g~----cys~ct~~~~aS 56 (100)
+=-..|-++|-++||..-==-....|- |+.+|++.+--.
T Consensus 6 LCGs~LVdaL~~vCg~rGf~~~p~~GIVeqCC~~~C~~~~Le~ 48 (51)
T g1mso.1 6 LCGSHLVEALYLVCGERGFFYTPKTGIVEQCCTSICSLYQLEN 48 (51)
T ss_dssp CCTHHHHHHHHHHHGGGCEEECCCC------------------
T ss_pred cccHHHHHHHHHHHccCCcccCCCCChHHHhcCCCCCHHHHHh
Confidence 334678899999998610000011122 788888765433
No 9
>d1nkza_ f.3.1.1 (A:) Light-harvesting complex subunits {Purple bacterium (Rhodoblastus acidophilus) [TaxId: 1074]}
Probab=13.18 E-value=12 Score=20.19 Aligned_cols=14 Identities=29% Similarity=0.603 Sum_probs=10.6
Q ss_pred CCceeeEeCCCCCH
Q 039834 7 TERTWCVAKPATSD 20 (100)
Q Consensus 7 ~~~~wCV~~~~~~~ 20 (100)
.++.|+|+||.+-.
T Consensus 3 qgkiW~VV~PtVG~ 16 (53)
T d1nkza_ 3 QGKIWTVVNPAIGI 16 (53)
T ss_dssp CTTGGGTSCHHHHH
T ss_pred CceEEEEECCCcCc
Confidence 47889999987643
No 10
>d1cc5a_ a.3.1.1 (A:) Cytochrome c5 {Azotobacter vinelandii [TaxId: 354]}
Probab=11.39 E-value=73 Score=16.84 Aligned_cols=15 Identities=27% Similarity=0.244 Sum_probs=12.4
Q ss_pred CCCCHHHHHHHHHhh
Q 039834 16 PATSDQLLQSNIDFA 30 (100)
Q Consensus 16 ~~~~~~~l~~~ld~a 30 (100)
..+++++|.++++|+
T Consensus 66 ~~Lsd~ei~~vv~Yi 80 (83)
T d1cc5a_ 66 ADCSDDELKAAIGKM 80 (83)
T ss_dssp SSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 347899999999986
Done!