Query 039837
Match_columns 544
No_of_seqs 193 out of 1822
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 02:28:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039837.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039837hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 1.5E-81 3.3E-86 621.3 48.0 489 44-541 24-533 (537)
2 KOG1177 Long chain fatty acid 100.0 9.5E-80 2.1E-84 565.3 42.3 503 34-543 48-590 (596)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 1.1E-75 2.4E-80 602.1 52.5 503 32-540 7-527 (534)
4 COG0365 Acs Acyl-coenzyme A sy 100.0 9.9E-74 2.1E-78 562.3 45.8 485 36-539 8-521 (528)
5 PLN02330 4-coumarate--CoA liga 100.0 3.8E-72 8.2E-77 582.3 54.2 524 18-541 10-542 (546)
6 PLN02574 4-coumarate--CoA liga 100.0 4.3E-71 9.3E-76 575.4 55.6 517 20-542 22-556 (560)
7 PLN02246 4-coumarate--CoA liga 100.0 3.7E-71 8E-76 574.1 54.7 514 23-539 10-535 (537)
8 PRK07788 acyl-CoA synthetase; 100.0 1.2E-71 2.7E-76 579.2 48.8 485 36-537 49-548 (549)
9 PLN02860 o-succinylbenzoate-Co 100.0 3.1E-71 6.7E-76 576.8 48.2 499 33-544 4-558 (563)
10 COG1021 EntE Peptide arylation 100.0 8E-73 1.7E-77 507.8 30.4 495 34-541 26-539 (542)
11 PRK06334 long chain fatty acid 100.0 2.4E-70 5.3E-75 565.8 47.9 488 35-542 18-537 (539)
12 PLN02654 acetate-CoA ligase 100.0 5.1E-70 1.1E-74 574.9 50.3 499 34-540 85-640 (666)
13 PRK07529 AMP-binding domain pr 100.0 1.8E-69 3.9E-74 569.0 52.7 497 33-541 22-571 (632)
14 PTZ00237 acetyl-CoA synthetase 100.0 4.5E-70 9.7E-75 573.4 47.7 493 36-539 58-622 (647)
15 TIGR02316 propion_prpE propion 100.0 1E-69 2.2E-74 571.5 49.9 500 34-539 49-603 (628)
16 PRK08314 long-chain-fatty-acid 100.0 1E-68 2.2E-73 557.8 53.4 496 34-541 8-543 (546)
17 PLN02736 long-chain acyl-CoA s 100.0 1.8E-69 4E-74 571.4 48.3 497 33-544 41-645 (651)
18 PRK05677 long-chain-fatty-acid 100.0 8.5E-69 1.8E-73 558.8 52.4 497 35-542 23-559 (562)
19 PRK13295 cyclohexanecarboxylat 100.0 2.1E-68 4.6E-73 554.3 52.1 492 35-540 23-544 (547)
20 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.9E-68 4.1E-73 562.8 51.5 498 36-541 56-603 (625)
21 PRK05605 long-chain-fatty-acid 100.0 3.3E-68 7.2E-73 556.4 52.7 500 35-544 31-573 (573)
22 PRK08315 AMP-binding domain pr 100.0 6.8E-68 1.5E-72 553.2 53.3 509 28-542 8-553 (559)
23 PRK07638 acyl-CoA synthetase; 100.0 1.9E-68 4.2E-73 547.5 47.4 476 36-541 1-482 (487)
24 PRK13382 acyl-CoA synthetase; 100.0 3.2E-68 6.9E-73 551.0 49.3 483 35-536 42-536 (537)
25 PRK05852 acyl-CoA synthetase; 100.0 2.3E-68 5.1E-73 552.7 47.2 505 28-540 8-532 (534)
26 PRK07656 long-chain-fatty-acid 100.0 8.8E-68 1.9E-72 547.4 50.9 492 35-536 4-512 (513)
27 PRK06839 acyl-CoA synthetase; 100.0 7.1E-68 1.5E-72 545.5 49.4 483 37-540 3-495 (496)
28 PRK00174 acetyl-CoA synthetase 100.0 1.4E-67 3.1E-72 557.0 52.7 498 36-541 66-611 (637)
29 PRK12583 acyl-CoA synthetase; 100.0 3.2E-67 6.9E-72 548.3 54.0 502 34-542 16-554 (558)
30 PRK04319 acetyl-CoA synthetase 100.0 1.1E-67 2.4E-72 551.3 50.2 494 35-539 41-558 (570)
31 PRK08316 acyl-CoA synthetase; 100.0 1.7E-67 3.6E-72 546.6 51.2 500 33-543 8-522 (523)
32 PLN02614 long-chain acyl-CoA s 100.0 5.2E-68 1.1E-72 558.4 46.0 499 33-544 42-653 (666)
33 PRK06155 crotonobetaine/carnit 100.0 3.8E-67 8.3E-72 543.2 51.3 488 34-539 19-523 (542)
34 PRK06060 acyl-CoA synthetase; 100.0 8.1E-68 1.8E-72 564.4 46.7 476 36-538 4-490 (705)
35 PRK09274 peptide synthase; Pro 100.0 9.9E-68 2.1E-72 550.6 46.2 496 35-543 5-551 (552)
36 PRK12467 peptide synthase; Pro 100.0 9E-69 2E-73 650.0 42.7 522 2-538 3060-3592(3956)
37 PRK06145 acyl-CoA synthetase; 100.0 4.3E-67 9.3E-72 539.4 48.8 489 36-539 2-496 (497)
38 PRK07514 malonyl-CoA synthase; 100.0 1.2E-66 2.6E-71 537.3 51.1 491 35-542 2-503 (504)
39 PRK10524 prpE propionyl-CoA sy 100.0 8.9E-67 1.9E-71 550.6 50.5 498 36-539 52-604 (629)
40 TIGR03443 alpha_am_amid L-amin 100.0 1.3E-67 2.9E-72 603.0 46.6 529 2-538 202-826 (1389)
41 PLN02861 long-chain-fatty-acid 100.0 3.8E-67 8.3E-72 552.5 45.8 499 33-544 40-650 (660)
42 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 2.1E-66 4.6E-71 537.2 50.2 487 35-535 22-527 (527)
43 PRK06187 long-chain-fatty-acid 100.0 2.8E-66 6.1E-71 537.5 51.1 498 33-540 3-519 (521)
44 PRK05857 acyl-CoA synthetase; 100.0 6.5E-67 1.4E-71 541.6 46.1 499 35-540 13-531 (540)
45 PRK06087 short chain acyl-CoA 100.0 3.7E-66 7.9E-71 538.2 51.8 498 35-543 22-539 (547)
46 PLN03102 acyl-activating enzym 100.0 2.6E-66 5.7E-71 540.4 50.3 494 36-541 14-555 (579)
47 PRK07786 long-chain-fatty-acid 100.0 4.8E-66 1E-70 536.1 51.9 500 29-541 10-525 (542)
48 PRK07470 acyl-CoA synthetase; 100.0 3.1E-66 6.8E-71 536.6 49.9 497 34-541 5-519 (528)
49 PRK03640 O-succinylbenzoic aci 100.0 3.9E-66 8.3E-71 530.6 49.7 474 36-540 2-482 (483)
50 PTZ00342 acyl-CoA synthetase; 100.0 1.6E-66 3.4E-71 545.2 46.8 499 32-543 57-737 (746)
51 PRK09088 acyl-CoA synthetase; 100.0 5.8E-66 1.3E-70 529.6 50.1 483 43-541 2-486 (488)
52 PRK06710 long-chain-fatty-acid 100.0 8.6E-66 1.9E-70 537.0 51.4 496 36-541 24-556 (563)
53 PRK07769 long-chain-fatty-acid 100.0 6.1E-67 1.3E-71 551.6 43.1 498 31-540 16-614 (631)
54 PRK07867 acyl-CoA synthetase; 100.0 9.9E-66 2.2E-70 530.6 51.1 480 33-539 2-506 (529)
55 PLN03052 acetate--CoA ligase; 100.0 8.1E-66 1.8E-70 543.8 51.4 498 34-542 172-723 (728)
56 PRK08008 caiC putative crotono 100.0 7E-66 1.5E-70 532.9 49.5 491 34-535 5-517 (517)
57 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.2E-65 2.5E-70 533.1 50.7 487 35-535 21-537 (538)
58 PRK12316 peptide synthase; Pro 100.0 2.5E-67 5.3E-72 647.1 44.8 524 2-538 1968-2502(5163)
59 PRK03584 acetoacetyl-CoA synth 100.0 6.9E-66 1.5E-70 545.5 49.7 494 32-539 82-624 (655)
60 PRK06164 acyl-CoA synthetase; 100.0 5.9E-66 1.3E-70 536.1 48.2 502 28-542 2-534 (540)
61 TIGR03098 ligase_PEP_1 acyl-Co 100.0 9.9E-66 2.2E-70 532.1 49.6 487 37-536 1-514 (515)
62 PRK13388 acyl-CoA synthetase; 100.0 5.3E-66 1.1E-70 534.4 47.1 479 36-540 3-506 (540)
63 PRK12467 peptide synthase; Pro 100.0 3.1E-67 6.7E-72 636.7 43.8 523 2-538 1539-2083(3956)
64 PRK10252 entF enterobactin syn 100.0 1.4E-66 3.1E-71 592.9 46.8 519 2-536 425-963 (1296)
65 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.6E-65 3.5E-70 540.0 49.2 492 33-539 84-625 (652)
66 PRK12316 peptide synthase; Pro 100.0 6.4E-67 1.4E-71 643.4 44.7 518 2-538 476-1004(5163)
67 PRK10946 entE enterobactin syn 100.0 2.2E-65 4.7E-70 530.1 49.3 490 35-542 24-534 (536)
68 PRK12492 long-chain-fatty-acid 100.0 3.6E-65 7.9E-70 531.5 50.2 492 35-537 23-561 (562)
69 TIGR01734 D-ala-DACP-lig D-ala 100.0 9.3E-66 2E-70 530.4 44.7 484 37-539 1-501 (502)
70 PRK08043 bifunctional acyl-[ac 100.0 1.6E-65 3.4E-70 547.0 47.9 483 34-540 202-713 (718)
71 PRK06188 acyl-CoA synthetase; 100.0 6.2E-65 1.3E-69 526.5 50.4 494 35-541 11-518 (524)
72 PRK06178 acyl-CoA synthetase; 100.0 1.4E-64 3E-69 528.3 52.7 500 35-540 32-565 (567)
73 PRK08279 long-chain-acyl-CoA s 100.0 3E-65 6.5E-70 536.3 47.1 492 33-541 34-565 (600)
74 PRK07059 Long-chain-fatty-acid 100.0 2.2E-64 4.7E-69 525.8 52.2 493 34-537 21-555 (557)
75 PRK07008 long-chain-fatty-acid 100.0 1.3E-64 2.8E-69 524.7 50.1 494 36-540 10-533 (539)
76 PRK13383 acyl-CoA synthetase; 100.0 8.8E-65 1.9E-69 523.7 48.0 479 34-535 33-515 (516)
77 PRK08633 2-acyl-glycerophospho 100.0 9.3E-65 2E-69 572.6 50.8 498 33-541 612-1144(1146)
78 PRK06018 putative acyl-CoA syn 100.0 3.7E-64 8E-69 522.0 50.8 496 34-540 8-534 (542)
79 PRK05851 long-chain-fatty-acid 100.0 1.6E-65 3.4E-70 529.4 40.0 487 36-540 1-522 (525)
80 PRK08180 feruloyl-CoA synthase 100.0 6.5E-65 1.4E-69 533.6 44.8 491 35-544 38-600 (614)
81 PRK13390 acyl-CoA synthetase; 100.0 1.5E-64 3.3E-69 520.6 46.3 480 43-535 4-501 (501)
82 PRK05620 long-chain-fatty-acid 100.0 4.1E-64 9E-69 525.1 49.0 501 34-540 8-557 (576)
83 PRK12476 putative fatty-acid-- 100.0 8.6E-65 1.9E-69 532.9 43.3 495 33-540 31-606 (612)
84 PRK08751 putative long-chain f 100.0 1E-63 2.2E-68 521.4 50.8 492 35-537 24-557 (560)
85 PRK07868 acyl-CoA synthetase; 100.0 1.2E-64 2.6E-69 552.1 44.7 507 3-537 416-955 (994)
86 PRK04813 D-alanine--poly(phosp 100.0 6.3E-64 1.4E-68 517.3 46.9 485 36-539 2-502 (503)
87 PLN02387 long-chain-fatty-acid 100.0 2.1E-64 4.6E-69 533.7 44.2 499 33-544 55-693 (696)
88 PRK05691 peptide synthase; Val 100.0 3E-65 6.4E-70 624.9 43.3 519 2-537 3685-4225(4334)
89 TIGR03205 pimA dicarboxylate-- 100.0 5.1E-63 1.1E-67 513.6 52.3 491 35-535 20-541 (541)
90 PTZ00216 acyl-CoA synthetase; 100.0 3.7E-64 8E-69 533.3 44.4 494 35-544 68-695 (700)
91 PRK05691 peptide synthase; Val 100.0 2.4E-64 5.1E-69 616.9 46.9 517 2-537 1098-1625(4334)
92 PRK07787 acyl-CoA synthetase; 100.0 2.2E-63 4.7E-68 507.4 45.4 458 45-536 9-469 (471)
93 TIGR02262 benz_CoA_lig benzoat 100.0 1.1E-62 2.4E-67 507.7 48.5 484 39-537 7-508 (508)
94 PRK08974 long-chain-fatty-acid 100.0 3.1E-62 6.6E-67 510.0 51.9 496 35-542 22-557 (560)
95 PLN02479 acetate-CoA ligase 100.0 1.4E-62 3E-67 512.3 48.6 495 35-540 19-558 (567)
96 PRK07798 acyl-CoA synthetase; 100.0 3.2E-62 6.9E-67 508.5 50.6 492 36-541 3-533 (533)
97 PLN02430 long-chain-fatty-acid 100.0 6.4E-63 1.4E-67 519.3 44.1 499 33-544 39-650 (660)
98 PRK07445 O-succinylbenzoic aci 100.0 3.2E-63 7E-68 500.1 39.7 431 63-543 19-450 (452)
99 PRK13391 acyl-CoA synthetase; 100.0 6.7E-62 1.5E-66 501.9 49.7 485 43-540 4-509 (511)
100 COG1022 FAA1 Long-chain acyl-C 100.0 2.6E-63 5.6E-68 495.1 37.4 485 32-543 12-604 (613)
101 PRK08276 long-chain-fatty-acid 100.0 4.3E-62 9.2E-67 502.8 47.6 472 60-543 8-499 (502)
102 PRK12582 acyl-CoA synthetase; 100.0 8.4E-63 1.8E-67 518.6 42.5 493 31-544 44-611 (624)
103 PRK09029 O-succinylbenzoic aci 100.0 1.7E-62 3.8E-67 499.2 42.2 454 37-544 3-457 (458)
104 PRK08162 acyl-CoA synthetase; 100.0 7E-61 1.5E-65 498.6 51.9 495 35-540 17-539 (545)
105 PRK12406 long-chain-fatty-acid 100.0 4.7E-61 1E-65 495.6 49.2 473 54-540 4-503 (509)
106 PRK06814 acylglycerophosphoeth 100.0 4.1E-61 8.8E-66 540.6 51.3 485 35-542 630-1134(1140)
107 PRK05850 acyl-CoA synthetase; 100.0 2.9E-61 6.2E-66 504.6 43.3 493 36-541 1-569 (578)
108 PRK09192 acyl-CoA synthetase; 100.0 1.2E-61 2.7E-66 506.5 40.0 496 28-540 13-566 (579)
109 KOG1256 Long-chain acyl-CoA sy 100.0 7E-61 1.5E-65 469.6 39.8 502 32-544 71-684 (691)
110 PLN03051 acyl-activating enzym 100.0 5E-60 1.1E-64 485.0 41.1 438 95-543 1-494 (499)
111 KOG1175 Acyl-CoA synthetase [L 100.0 1.3E-59 2.7E-64 462.6 39.1 502 31-541 58-603 (626)
112 TIGR01923 menE O-succinylbenzo 100.0 3.7E-58 8.1E-63 465.4 42.3 429 65-534 1-436 (436)
113 PRK08308 acyl-CoA synthetase; 100.0 8E-58 1.7E-62 458.3 43.8 406 55-534 2-407 (414)
114 PRK07768 long-chain-fatty-acid 100.0 3.6E-58 7.8E-63 478.0 42.0 486 37-539 3-544 (545)
115 KOG1179 Very long-chain acyl-C 100.0 5.4E-55 1.2E-59 410.6 39.1 489 33-537 74-610 (649)
116 PF00501 AMP-binding: AMP-bind 100.0 1.4E-56 3.1E-61 451.0 30.4 394 42-445 1-417 (417)
117 KOG1180 Acyl-CoA synthetase [L 100.0 1.8E-55 3.9E-60 412.0 31.5 505 29-544 34-673 (678)
118 TIGR01733 AA-adenyl-dom amino 100.0 2E-52 4.4E-57 419.9 34.9 395 65-469 1-408 (408)
119 PRK07824 O-succinylbenzoic aci 100.0 2.6E-46 5.7E-51 367.6 33.3 317 184-540 36-357 (358)
120 PTZ00297 pantothenate kinase; 100.0 2.8E-44 6E-49 391.5 40.7 464 33-544 424-999 (1452)
121 COG1020 EntF Non-ribosomal pep 100.0 9.9E-42 2.2E-46 361.4 35.7 443 2-462 196-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 3.3E-38 7.2E-43 307.6 29.0 288 185-530 97-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 5.2E-36 1.1E-40 300.3 26.5 317 188-532 80-418 (422)
124 KOG3628 Predicted AMP-binding 100.0 9.8E-33 2.1E-37 276.9 34.7 496 36-540 770-1351(1363)
125 KOG1178 Non-ribosomal peptide 100.0 1.8E-32 3.9E-37 284.1 23.7 516 10-536 10-575 (1032)
126 TIGR03335 F390_ftsA coenzyme F 100.0 7.6E-29 1.7E-33 248.3 27.6 320 188-531 91-440 (445)
127 COG1541 PaaK Coenzyme F390 syn 100.0 1.8E-27 4E-32 225.1 24.7 320 188-531 95-430 (438)
128 TIGR03089 conserved hypothetic 99.9 4.4E-23 9.6E-28 186.3 20.8 205 42-276 2-227 (227)
129 KOG3628 Predicted AMP-binding 99.9 3.8E-21 8.3E-26 194.3 21.6 501 18-540 76-704 (1363)
130 PRK09188 serine/threonine prot 99.9 1.2E-21 2.5E-26 186.9 14.2 118 414-540 207-328 (365)
131 TIGR02304 aden_form_hyp probab 99.7 4.3E-15 9.4E-20 145.5 22.9 240 188-471 104-365 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.3 4.2E-12 9.2E-17 92.3 5.8 70 453-528 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 98.9 8.2E-08 1.8E-12 92.3 17.5 224 187-440 93-350 (365)
134 PF03321 GH3: GH3 auxin-respon 98.0 7.5E-05 1.6E-09 76.5 13.4 178 299-506 266-467 (528)
135 PLN02249 indole-3-acetic acid- 97.9 0.003 6.6E-08 65.1 21.4 135 299-460 301-456 (597)
136 PLN02620 indole-3-acetic acid- 97.8 0.0023 4.9E-08 65.3 18.6 138 299-461 303-470 (612)
137 PF14535 AMP-binding_C_2: AMP- 97.7 8.3E-05 1.8E-09 56.9 6.2 84 446-531 1-91 (96)
138 PLN02247 indole-3-acetic acid- 97.2 0.0051 1.1E-07 62.9 12.5 138 299-461 292-464 (606)
139 COG1541 PaaK Coenzyme F390 syn 94.7 0.23 4.9E-06 48.8 9.6 87 63-150 109-197 (438)
140 TIGR02155 PA_CoA_ligase phenyl 86.2 5.1 0.00011 40.3 9.8 86 63-149 94-181 (422)
141 TIGR03335 F390_ftsA coenzyme F 86.2 6.3 0.00014 40.0 10.4 80 63-145 105-186 (445)
142 PRK07656 long-chain-fatty-acid 71.5 34 0.00073 35.3 10.6 84 63-150 185-270 (513)
143 PRK06187 long-chain-fatty-acid 70.8 28 0.0006 35.9 9.8 84 63-150 186-270 (521)
144 COG0399 WecE Predicted pyridox 70.8 19 0.00041 35.2 7.7 65 73-141 59-128 (374)
145 TIGR03089 conserved hypothetic 67.7 27 0.00058 31.6 7.7 54 81-136 171-226 (227)
146 PRK12583 acyl-CoA synthetase; 64.2 82 0.0018 32.9 11.8 82 63-147 220-303 (558)
147 KOG1177 Long chain fatty acid 63.2 49 0.0011 33.2 8.7 118 29-149 200-338 (596)
148 PRK08315 AMP-binding domain pr 63.2 43 0.00094 35.0 9.5 83 62-147 217-301 (559)
149 TIGR01923 menE O-succinylbenzo 62.0 48 0.001 33.3 9.3 83 62-150 129-212 (436)
150 PLN03051 acyl-activating enzym 62.0 62 0.0014 33.3 10.2 85 62-149 137-222 (499)
151 PRK06334 long chain fatty acid 60.7 1E+02 0.0022 32.2 11.6 98 49-149 181-287 (539)
152 cd01445 TST_Repeats Thiosulfat 60.4 21 0.00046 29.2 5.2 43 74-116 81-126 (138)
153 TIGR03098 ligase_PEP_1 acyl-Co 59.8 61 0.0013 33.4 9.8 85 62-150 179-264 (515)
154 TIGR01733 AA-adenyl-dom amino 56.1 1.3E+02 0.0029 29.6 11.3 98 50-150 119-226 (408)
155 PRK10696 tRNA 2-thiocytidine b 55.3 1E+02 0.0022 28.5 9.4 78 65-142 4-94 (258)
156 PRK04319 acetyl-CoA synthetase 54.7 1.1E+02 0.0023 32.2 10.7 85 63-150 224-310 (570)
157 TIGR03590 PseG pseudaminic aci 54.7 1.2E+02 0.0026 28.4 9.9 95 61-162 9-112 (279)
158 PF01041 DegT_DnrJ_EryC1: DegT 54.3 39 0.00084 33.2 6.8 87 39-141 27-119 (363)
159 PRK03640 O-succinylbenzoic aci 53.8 1.2E+02 0.0026 30.9 10.7 84 63-150 160-244 (483)
160 PF00501 AMP-binding: AMP-bind 51.6 71 0.0015 31.7 8.5 97 49-149 153-261 (417)
161 PLN02860 o-succinylbenzoate-Co 51.1 1.6E+02 0.0035 30.8 11.4 97 49-149 170-274 (563)
162 TIGR02379 ECA_wecE TDP-4-keto- 51.1 57 0.0012 32.2 7.4 59 79-141 62-125 (376)
163 PRK02261 methylaspartate mutas 49.8 1.4E+02 0.0031 24.4 9.6 47 236-282 15-62 (137)
164 PRK06164 acyl-CoA synthetase; 48.9 1.6E+02 0.0035 30.5 10.9 97 49-149 179-283 (540)
165 PRK08316 acyl-CoA synthetase; 47.4 1.1E+02 0.0023 31.6 9.3 84 62-149 189-274 (523)
166 TIGR02370 pyl_corrinoid methyl 47.2 1.9E+02 0.0041 25.4 9.3 95 224-322 83-185 (197)
167 KOG1176 Acyl-CoA synthetase [L 47.2 65 0.0014 33.5 7.2 89 200-290 43-135 (537)
168 PLN02736 long-chain acyl-CoA s 47.0 69 0.0015 34.4 7.9 88 201-290 77-166 (651)
169 PRK07788 acyl-CoA synthetase; 46.8 79 0.0017 33.0 8.2 85 202-288 74-160 (549)
170 PRK11706 TDP-4-oxo-6-deoxy-D-g 45.3 80 0.0017 31.1 7.5 57 81-141 64-125 (375)
171 PRK06188 acyl-CoA synthetase; 45.3 2.3E+02 0.0051 29.2 11.4 83 63-149 187-269 (524)
172 PRK07638 acyl-CoA synthetase; 45.3 1.3E+02 0.0028 30.7 9.4 85 62-150 161-246 (487)
173 cd01449 TST_Repeat_2 Thiosulfa 44.0 48 0.001 26.0 4.7 41 74-114 64-104 (118)
174 PF11142 DUF2917: Protein of u 43.8 92 0.002 21.4 5.3 34 388-436 25-58 (63)
175 PRK05605 long-chain-fatty-acid 43.0 91 0.002 32.7 8.0 85 202-288 57-143 (573)
176 TIGR02262 benz_CoA_lig benzoat 43.0 2.3E+02 0.0049 29.1 10.8 98 49-148 159-265 (508)
177 PRK08308 acyl-CoA synthetase; 43.0 3E+02 0.0066 27.3 11.4 84 62-149 119-204 (414)
178 PLN03102 acyl-activating enzym 42.9 86 0.0019 33.1 7.7 82 202-285 39-122 (579)
179 PF00818 Ice_nucleation: Ice n 42.4 12 0.00027 17.5 0.5 9 334-342 1-9 (16)
180 TIGR02898 spore_YhcN_YlaJ spor 41.9 1.1E+02 0.0024 25.7 6.5 63 451-518 56-120 (158)
181 PTZ00237 acetyl-CoA synthetase 41.4 90 0.002 33.5 7.7 80 201-282 91-172 (647)
182 PRK08043 bifunctional acyl-[ac 41.2 2.4E+02 0.0053 30.7 11.1 94 49-145 363-465 (718)
183 cd02069 methionine_synthase_B1 40.9 2E+02 0.0044 25.6 8.6 92 225-322 88-187 (213)
184 PRK05620 long-chain-fatty-acid 40.9 2.5E+02 0.0055 29.4 10.9 86 62-148 199-285 (576)
185 COG0031 CysK Cysteine synthase 40.8 1.4E+02 0.003 28.2 7.6 61 82-143 55-116 (300)
186 PRK06155 crotonobetaine/carnit 40.7 1.2E+02 0.0025 31.7 8.2 86 201-288 45-132 (542)
187 cd01519 RHOD_HSP67B2 Member of 40.6 64 0.0014 24.6 4.8 51 64-114 38-92 (106)
188 PLN02246 4-coumarate--CoA liga 40.4 98 0.0021 32.2 7.7 85 200-286 48-134 (537)
189 PLN02654 acetate-CoA ligase 40.0 1E+02 0.0022 33.3 7.8 81 201-283 119-201 (666)
190 cd02070 corrinoid_protein_B12- 39.8 2.6E+02 0.0057 24.6 10.0 90 226-319 83-180 (201)
191 COG0318 CaiC Acyl-CoA syntheta 39.4 2.8E+02 0.0061 28.8 10.8 99 49-148 169-277 (534)
192 cd07050 BMC_EutL_repeat2 ethan 39.0 49 0.0011 23.8 3.3 39 77-115 3-42 (87)
193 COG4009 Uncharacterized protei 38.8 48 0.001 23.7 3.2 68 62-140 8-78 (88)
194 PRK08279 long-chain-acyl-CoA s 38.6 2.9E+02 0.0062 29.2 10.9 83 62-148 217-301 (600)
195 PRK07514 malonyl-CoA synthase; 38.6 1.3E+02 0.0027 31.0 8.1 86 200-287 26-113 (504)
196 cd04910 ACT_AK-Ectoine_1 ACT d 38.5 57 0.0012 23.1 3.7 51 264-331 19-69 (71)
197 TIGR03595 Obg_CgtA_exten Obg f 38.2 35 0.00075 24.0 2.6 19 76-94 45-63 (69)
198 PTZ00342 acyl-CoA synthetase; 38.1 1.7E+02 0.0038 32.0 9.2 88 201-290 90-193 (746)
199 COG2236 Predicted phosphoribos 38.1 55 0.0012 28.5 4.3 35 62-96 5-39 (192)
200 PLN02330 4-coumarate--CoA liga 38.1 97 0.0021 32.3 7.2 85 200-286 53-139 (546)
201 PLN02565 cysteine synthase 38.0 2.2E+02 0.0047 27.4 8.9 90 52-143 31-121 (322)
202 KOG1179 Very long-chain acyl-C 37.8 1.2E+02 0.0026 31.3 7.1 77 64-145 262-341 (649)
203 PRK13383 acyl-CoA synthetase; 36.9 1.3E+02 0.0029 31.0 7.9 85 202-288 60-146 (516)
204 PRK06839 acyl-CoA synthetase; 36.7 1.8E+02 0.004 29.6 8.9 87 200-288 25-114 (496)
205 PRK08751 putative long-chain f 36.7 1.4E+02 0.003 31.3 8.1 84 201-286 49-135 (560)
206 PF09269 DUF1967: Domain of un 36.6 30 0.00066 24.3 2.1 31 63-93 32-62 (69)
207 PF00403 HMA: Heavy-metal-asso 36.6 1.3E+02 0.0028 20.1 5.5 45 452-504 14-58 (62)
208 PF09580 Spore_YhcN_YlaJ: Spor 36.3 80 0.0017 27.1 5.2 53 450-508 76-128 (177)
209 PRK09274 peptide synthase; Pro 36.2 1.2E+02 0.0026 31.6 7.6 81 200-282 39-121 (552)
210 PRK13295 cyclohexanecarboxylat 36.1 4.1E+02 0.009 27.6 11.6 83 63-149 216-300 (547)
211 PRK11493 sseA 3-mercaptopyruva 36.1 59 0.0013 30.5 4.7 52 63-114 201-257 (281)
212 PLN02723 3-mercaptopyruvate su 35.9 61 0.0013 31.1 4.8 53 63-115 238-296 (320)
213 PLN02861 long-chain-fatty-acid 35.5 1.6E+02 0.0034 31.7 8.4 86 201-288 76-163 (660)
214 TIGR02316 propion_prpE propion 35.5 1.1E+02 0.0025 32.5 7.3 80 201-282 82-163 (628)
215 PLN02614 long-chain acyl-CoA s 35.4 1.5E+02 0.0032 32.0 8.1 86 201-288 78-165 (666)
216 PRK11658 UDP-4-amino-4-deoxy-L 35.0 1.4E+02 0.0031 29.4 7.4 63 74-140 59-126 (379)
217 PRK08314 long-chain-fatty-acid 34.9 1.4E+02 0.0031 31.0 7.8 85 202-288 35-122 (546)
218 PRK13388 acyl-CoA synthetase; 34.8 1.5E+02 0.0032 30.9 7.9 84 201-286 25-111 (540)
219 PRK00174 acetyl-CoA synthetase 34.7 1.3E+02 0.0029 32.1 7.7 82 200-283 96-179 (637)
220 PLN02387 long-chain-fatty-acid 34.6 1.6E+02 0.0035 31.9 8.3 88 201-290 105-194 (696)
221 COG1064 AdhP Zn-dependent alco 34.4 94 0.002 29.9 5.6 60 80-143 159-218 (339)
222 TIGR00715 precor6x_red precorr 34.0 2.1E+02 0.0046 26.4 7.8 73 88-163 150-233 (256)
223 PRK09162 hypoxanthine-guanine 34.0 1.1E+02 0.0024 26.4 5.7 47 61-108 14-60 (181)
224 PLN02574 4-coumarate--CoA liga 34.0 1.6E+02 0.0035 30.8 8.1 85 202-288 66-153 (560)
225 PRK03584 acetoacetyl-CoA synth 33.9 1.3E+02 0.0027 32.4 7.4 80 201-282 113-194 (655)
226 TIGR03588 PseC UDP-4-keto-6-de 33.8 1.7E+02 0.0037 28.8 7.8 64 74-140 55-126 (380)
227 TIGR01217 ac_ac_CoA_syn acetoa 33.8 1.2E+02 0.0026 32.5 7.2 80 201-282 113-194 (652)
228 TIGR02188 Ac_CoA_lig_AcsA acet 33.7 1.3E+02 0.0028 32.0 7.4 82 200-283 86-169 (625)
229 PRK05677 long-chain-fatty-acid 33.5 1.6E+02 0.0034 30.9 7.9 83 201-285 48-133 (562)
230 PF06543 Lac_bphage_repr: Lact 33.5 34 0.00074 21.7 1.7 20 307-326 24-43 (49)
231 PRK08162 acyl-CoA synthetase; 33.4 1.4E+02 0.0029 31.2 7.4 85 201-287 42-128 (545)
232 PRK12476 putative fatty-acid-- 33.3 1.8E+02 0.0038 31.0 8.3 85 201-287 67-155 (612)
233 PRK07470 acyl-CoA synthetase; 33.2 4.3E+02 0.0093 27.3 11.1 87 62-149 181-268 (528)
234 PLN03052 acetate--CoA ligase; 32.8 1.4E+02 0.0029 32.7 7.4 81 201-283 207-289 (728)
235 PRK05852 acyl-CoA synthetase; 32.7 3.4E+02 0.0074 28.1 10.3 85 63-150 195-282 (534)
236 PRK05850 acyl-CoA synthetase; 32.6 1.4E+02 0.0031 31.3 7.5 86 201-288 34-123 (578)
237 PRK07059 Long-chain-fatty-acid 32.6 1.7E+02 0.0036 30.6 7.9 84 201-286 47-132 (557)
238 KOG0025 Zn2+-binding dehydroge 32.4 1.4E+02 0.0029 28.0 5.9 63 84-146 157-220 (354)
239 TIGR01734 D-ala-DACP-lig D-ala 32.3 4.8E+02 0.01 26.6 11.2 84 62-148 159-245 (502)
240 KOG0023 Alcohol dehydrogenase, 32.1 1.9E+02 0.0042 27.5 7.0 64 79-145 173-236 (360)
241 PRK11761 cysM cysteine synthas 31.9 2.7E+02 0.0059 26.3 8.4 89 52-143 28-117 (296)
242 cd00754 MoaD Ubiquitin domain 31.8 88 0.0019 22.4 4.1 50 32-96 22-76 (80)
243 PRK08633 2-acyl-glycerophospho 31.7 3.7E+02 0.008 31.2 11.2 98 49-149 780-886 (1146)
244 PRK08008 caiC putative crotono 31.7 1.7E+02 0.0038 30.1 7.8 83 202-286 37-121 (517)
245 PRK07787 acyl-CoA synthetase; 31.4 5.4E+02 0.012 26.0 11.3 82 63-149 147-230 (471)
246 PRK05857 acyl-CoA synthetase; 31.1 1.4E+02 0.003 31.1 7.0 82 201-284 40-123 (540)
247 PLN02556 cysteine synthase/L-3 30.7 2.7E+02 0.0058 27.4 8.3 62 82-143 103-165 (368)
248 PRK15407 lipopolysaccharide bi 30.7 1.8E+02 0.0039 29.4 7.4 56 83-142 106-166 (438)
249 KOG1250 Threonine/serine dehyd 30.5 2.2E+02 0.0048 27.9 7.2 72 67-145 99-170 (457)
250 PRK06087 short chain acyl-CoA 30.4 1.5E+02 0.0033 30.8 7.2 79 201-281 48-128 (547)
251 PRK09088 acyl-CoA synthetase; 30.3 1.7E+02 0.0037 29.8 7.4 80 201-282 21-102 (488)
252 TIGR02275 DHB_AMP_lig 2,3-dihy 30.3 4.8E+02 0.01 26.9 10.8 97 49-149 181-287 (527)
253 PRK07867 acyl-CoA synthetase; 30.3 2.2E+02 0.0047 29.6 8.2 84 201-286 27-113 (529)
254 PRK07798 acyl-CoA synthetase; 30.2 2.1E+02 0.0046 29.5 8.2 86 201-288 27-114 (533)
255 COG1022 FAA1 Long-chain acyl-C 30.2 3.8E+02 0.0083 28.5 9.7 100 46-150 186-294 (613)
256 PRK10524 prpE propionyl-CoA sy 29.8 1.5E+02 0.0033 31.5 7.2 80 201-282 83-164 (629)
257 PRK07529 AMP-binding domain pr 29.6 1.4E+02 0.0031 31.8 6.9 80 199-281 55-136 (632)
258 cd01448 TST_Repeat_1 Thiosulfa 29.2 1.7E+02 0.0037 23.0 5.7 41 74-114 65-106 (122)
259 PRK12492 long-chain-fatty-acid 28.6 1.7E+02 0.0037 30.6 7.2 83 200-284 47-132 (562)
260 TIGR01139 cysK cysteine syntha 28.5 3.7E+02 0.0081 25.3 8.8 64 80-144 48-112 (298)
261 PRK10946 entE enterobactin syn 28.4 5.1E+02 0.011 26.8 10.7 84 62-149 200-286 (536)
262 PRK12406 long-chain-fatty-acid 28.3 2E+02 0.0043 29.6 7.6 85 202-288 11-97 (509)
263 PRK10877 protein disulfide iso 28.2 4.5E+02 0.0098 23.8 9.8 91 421-525 55-148 (232)
264 PRK06178 acyl-CoA synthetase; 27.6 2.1E+02 0.0045 30.0 7.7 85 202-288 58-144 (567)
265 cd03466 Nitrogenase_NifN_2 Nit 27.3 4.1E+02 0.0088 26.8 9.2 55 87-143 299-358 (429)
266 PRK10595 SOS cell division inh 27.0 2.1E+02 0.0046 24.2 5.9 66 76-141 69-140 (164)
267 COG2805 PilT Tfp pilus assembl 26.8 2.8E+02 0.006 26.4 7.0 100 33-133 137-245 (353)
268 KOG0633 Histidinol phosphate a 26.7 82 0.0018 28.7 3.5 65 79-143 101-168 (375)
269 PRK06814 acylglycerophosphoeth 26.3 5.6E+02 0.012 29.7 11.4 98 49-149 791-897 (1140)
270 PRK08276 long-chain-fatty-acid 26.2 2.3E+02 0.0051 28.9 7.6 88 199-288 8-97 (502)
271 PRK13382 acyl-CoA synthetase; 26.2 2.8E+02 0.0061 28.8 8.3 82 202-285 68-151 (537)
272 PLN03013 cysteine synthase 26.1 3.9E+02 0.0084 26.9 8.5 65 80-144 165-230 (429)
273 PRK07769 long-chain-fatty-acid 26.1 2.6E+02 0.0056 29.8 8.1 84 201-286 54-141 (631)
274 PLN00011 cysteine synthase 25.9 4.2E+02 0.0092 25.4 8.7 64 80-144 59-124 (323)
275 COG2885 OmpA Outer membrane pr 25.9 2.2E+02 0.0048 24.7 6.3 61 35-96 98-162 (190)
276 PRK10252 entF enterobactin syn 25.8 5.5E+02 0.012 30.3 11.4 98 49-149 596-703 (1296)
277 PRK07786 long-chain-fatty-acid 25.4 2.8E+02 0.006 28.9 8.0 83 202-286 42-126 (542)
278 PLN02430 long-chain-fatty-acid 25.2 2.8E+02 0.006 29.9 8.1 86 202-289 76-163 (660)
279 PRK05851 long-chain-fatty-acid 25.1 7E+02 0.015 25.7 11.0 90 49-141 150-251 (525)
280 PRK08974 long-chain-fatty-acid 25.0 2.3E+02 0.0051 29.5 7.4 82 201-284 47-131 (560)
281 PRK10287 thiosulfate:cyanide s 24.9 2.4E+02 0.0053 21.7 5.6 48 63-117 42-89 (104)
282 COG2897 SseA Rhodanese-related 24.4 1.1E+02 0.0024 28.7 4.1 55 62-116 202-262 (285)
283 PRK14807 histidinol-phosphate 24.3 6.5E+02 0.014 24.3 10.6 52 86-140 98-153 (351)
284 PRK06702 O-acetylhomoserine am 24.2 2.9E+02 0.0062 27.9 7.4 24 109-132 122-145 (432)
285 PF08479 POTRA_2: POTRA domain 24.2 1.1E+02 0.0024 21.7 3.4 32 61-93 28-59 (76)
286 PRK12582 acyl-CoA synthetase; 24.1 2E+02 0.0043 30.6 6.8 80 201-282 79-165 (624)
287 PTZ00216 acyl-CoA synthetase; 24.0 3E+02 0.0065 29.9 8.2 89 199-289 118-208 (700)
288 PLN02479 acetate-CoA ligase 24.0 3.2E+02 0.0069 28.6 8.2 82 202-285 45-128 (567)
289 PRK07008 long-chain-fatty-acid 23.9 2.1E+02 0.0044 29.8 6.7 85 63-149 195-281 (539)
290 cd01974 Nitrogenase_MoFe_beta 23.7 4.9E+02 0.011 26.3 9.1 30 87-117 302-331 (435)
291 PRK02261 methylaspartate mutas 23.7 4.1E+02 0.0088 21.7 7.2 42 102-143 21-62 (137)
292 KOG1138 Predicted cleavage and 23.6 1.5E+02 0.0032 30.0 4.9 72 78-149 408-480 (653)
293 PLN02238 hypoxanthine phosphor 23.6 1.9E+02 0.0042 25.2 5.4 22 62-83 10-31 (189)
294 TIGR01136 cysKM cysteine synth 23.5 5E+02 0.011 24.5 8.6 64 80-144 49-113 (299)
295 cd02070 corrinoid_protein_B12- 23.1 5.2E+02 0.011 22.7 10.6 83 61-143 48-141 (201)
296 PRK15400 lysine decarboxylase 22.7 2.2E+02 0.0048 30.8 6.4 57 85-144 232-307 (714)
297 PRK06060 acyl-CoA synthetase; 22.7 3E+02 0.0064 29.9 7.9 81 202-284 30-112 (705)
298 PRK13391 acyl-CoA synthetase; 22.7 3.1E+02 0.0066 28.2 7.7 83 202-286 24-108 (511)
299 cd02069 methionine_synthase_B1 22.6 5.5E+02 0.012 22.9 10.2 84 61-144 52-148 (213)
300 PF00036 EF-hand_1: EF hand; 22.3 96 0.0021 17.3 2.1 21 520-540 8-28 (29)
301 PRK13390 acyl-CoA synthetase; 22.1 2.8E+02 0.0061 28.3 7.3 81 201-283 23-105 (501)
302 PRK13237 tyrosine phenol-lyase 22.0 6.2E+02 0.013 25.8 9.0 68 62-134 76-173 (460)
303 TIGR03443 alpha_am_amid L-amin 22.0 6.4E+02 0.014 30.1 11.0 98 49-149 413-520 (1389)
304 cd02067 B12-binding B12 bindin 21.9 3.5E+02 0.0075 21.1 6.2 36 108-143 23-58 (119)
305 TIGR03208 cyc_hxne_CoA_lg cycl 21.8 8.9E+02 0.019 25.0 11.3 96 49-148 193-297 (538)
306 PRK09177 xanthine-guanine phos 21.8 2.5E+02 0.0054 23.6 5.5 38 63-102 9-46 (156)
307 TIGR01501 MthylAspMutase methy 21.8 1.3E+02 0.0029 24.5 3.7 47 236-282 13-60 (134)
308 smart00450 RHOD Rhodanese Homo 21.5 2.6E+02 0.0057 20.3 5.3 40 75-114 43-82 (100)
309 PF00682 HMGL-like: HMGL-like 21.5 3.6E+02 0.0077 24.4 7.0 70 39-116 140-210 (237)
310 TIGR01203 HGPRTase hypoxanthin 21.4 2.5E+02 0.0055 23.8 5.6 20 64-83 3-22 (166)
311 PRK08180 feruloyl-CoA synthase 21.4 2.3E+02 0.0049 30.2 6.5 81 200-282 67-154 (614)
312 PRK06710 long-chain-fatty-acid 21.3 2.6E+02 0.0056 29.2 6.9 82 202-285 49-132 (563)
313 PRK09192 acyl-CoA synthetase; 21.3 3.8E+02 0.0082 28.2 8.1 86 200-287 47-141 (579)
314 PRK06018 putative acyl-CoA syn 21.2 2.6E+02 0.0055 29.1 6.8 83 201-285 38-122 (542)
315 PRK11267 biopolymer transport 21.2 4.1E+02 0.0089 21.8 6.6 28 87-114 98-128 (141)
316 COG4821 Uncharacterized protei 20.8 1.6E+02 0.0036 25.7 4.1 54 69-143 85-139 (243)
317 cd07944 DRE_TIM_HOA_like 4-hyd 20.8 4.3E+02 0.0092 24.6 7.3 61 49-116 151-212 (266)
318 PLN02723 3-mercaptopyruvate su 20.7 2.3E+02 0.0049 27.3 5.7 41 74-114 89-130 (320)
319 cd00615 Orn_deC_like Ornithine 20.5 3.9E+02 0.0085 25.1 7.3 55 85-142 96-161 (294)
320 PF07722 Peptidase_C26: Peptid 20.4 1.1E+02 0.0024 27.3 3.4 32 105-136 30-61 (217)
321 PF05452 Clavanin: Clavanin; 20.4 41 0.00088 23.0 0.4 9 414-422 71-79 (80)
322 PF00455 DeoRC: DeoR C termina 20.4 4.9E+02 0.011 21.9 7.1 88 247-344 15-110 (161)
323 PF01060 DUF290: Transthyretin 20.4 3.3E+02 0.0072 19.6 5.2 16 361-376 6-21 (80)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-81 Score=621.25 Aligned_cols=489 Identities=39% Similarity=0.636 Sum_probs=429.4
Q ss_pred hhhhhcCCc-eEEEEccC-CceeeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCC
Q 039837 44 QDAELYADK-VAFVEAVS-GKAYTYAQVARDTRGFAKALRSLG--LRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGAN 119 (544)
Q Consensus 44 ~~a~~~p~~-~a~~~~~~-~~~~Ty~el~~~~~~la~~L~~~G--i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~ 119 (544)
+.+..++++ +.+++... ++.+||+|++.++.|+|..|.+.| +++||+|+++++|+++++.+++||..+|++..+++
T Consensus 24 ~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~N 103 (537)
T KOG1176|consen 24 RPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLN 103 (537)
T ss_pred ccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccC
Confidence 344344444 77766532 589999999999999999999875 88999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC----CcEEEecccc----cc---cccC-HHHHHHhhhhc-----CC
Q 039837 120 PTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG----LPIIVLGEER----IE---SAIN-WSELIEAADKA-----GN 182 (544)
Q Consensus 120 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~----~~~~~~~~~~----~~---~~~~-~~~~~~~~~~~-----~~ 182 (544)
|.+++.++.+.++.++++++|++.+....+.+.. ..++.+.... .. .... +..+....... ..
T Consensus 104 p~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (537)
T KOG1176|consen 104 PRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDGIRPVSE 183 (537)
T ss_pred cccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCCcccccCCC
Confidence 9999999999999999999999999888875543 4444443220 00 1111 22222221111 11
Q ss_pred CCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccC
Q 039837 183 NFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFE 262 (544)
Q Consensus 183 ~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~ 262 (544)
.......++|||||.||||++||+++..+.......+ .+...++.++.+|++|.+|+...+...+..|+++++...++
T Consensus 184 dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~--~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~ 261 (537)
T KOG1176|consen 184 DDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGW--ELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFD 261 (537)
T ss_pred CCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcc--cCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCC
Confidence 3444678999999999999999999999877766655 66779999999999999999888777888888998888899
Q ss_pred HHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccc
Q 039837 263 LRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSC 342 (544)
Q Consensus 263 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~ 342 (544)
+..+++.+++|++|+++++|..+..|++.+.....++++++. +.+||+++++++.+++.+.+|+..+.+.||+||+++
T Consensus 262 ~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~--v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~ 339 (537)
T KOG1176|consen 262 AELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRS--VLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGG 339 (537)
T ss_pred HHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEE--EEecCCCCCHHHHHHHHHhCCCceEEEeeccccccC
Confidence 999999999999999999999999999998777889999888 999999999999999999997799999999999997
Q ss_pred cccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCc
Q 039837 343 ITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGD 422 (544)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD 422 (544)
.++.+... .....+++|+++++++.++.+ ++|..+++++.||||++|+.++.|||+||+.|++.|+.+|||+|||
T Consensus 340 ~~~~~~~~----~e~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGD 414 (537)
T KOG1176|consen 340 LITSNDWG----PERKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGD 414 (537)
T ss_pred ceeecCCC----ccCcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCc
Confidence 77765421 114789999999999988888 8999999999999999999999999999999999998889999999
Q ss_pred eEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHH
Q 039837 423 IGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFV 502 (544)
Q Consensus 423 ~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l 502 (544)
+|++|+||++|+.+|++|+||.+|++|+|.|||++|.+||.|.|++|++++++..|+.++|+|+.+++...+++++.+++
T Consensus 415 iGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v 494 (537)
T KOG1176|consen 415 LGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYV 494 (537)
T ss_pred eEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 503 ASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 503 ~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
++++++|++|..++|+++||+|++|||+|+.|++++.+.
T Consensus 495 ~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~ 533 (537)
T KOG1176|consen 495 RKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKL 533 (537)
T ss_pred HhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999764
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=9.5e-80 Score=565.27 Aligned_cols=503 Identities=27% Similarity=0.393 Sum_probs=442.5
Q ss_pred CCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 34 ENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 34 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
.+.|+++.++..+++.||+.|.++..++-++||+|+.+.++.+|.+|.+.|+++||||++..||+.+|+..+|||.++|.
T Consensus 48 ~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~ 127 (596)
T KOG1177|consen 48 DSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGL 127 (596)
T ss_pred ccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhce
Confidence 46699999999999999999999887788899999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchHHH-----hhcC---------C---------CcEEEecc--ccccccc
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIYEK-----VKGL---------G---------LPIIVLGE--ERIESAI 168 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~-----~~~~---------~---------~~~~~~~~--~~~~~~~ 168 (544)
+.+++||++...+++..+++.+++++|..+.+... +.+. + +..+++.+ ....+..
T Consensus 128 v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~Ga~ 207 (596)
T KOG1177|consen 128 VLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLPGAF 207 (596)
T ss_pred EEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCCCce
Confidence 99999999999999999999999999987653221 1111 0 22233322 2222333
Q ss_pred CHHHHHHh------------hhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchh
Q 039837 169 NWSELIEA------------ADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFF 236 (544)
Q Consensus 169 ~~~~~~~~------------~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 236 (544)
.+++++.. .....+.....+.|||||||.|||+.+||-+++++........ ++...++++...|++
T Consensus 208 ~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~--g~~e~~~i~~~~Pl~ 285 (596)
T KOG1177|consen 208 LLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA--GYNEKHRICIPNPLY 285 (596)
T ss_pred ehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh--CcCcceEEEecCchH
Confidence 33333221 1112233444678999999999999999999999999888888 788888999999999
Q ss_pred HHHHHHHHHHhhHhccceEEEc-CccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCC
Q 039837 237 HIYGITGICCATLRNKGKVVMM-NRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLA 315 (544)
Q Consensus 237 ~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~ 315 (544)
|.+|....+++++..|++++++ +.+++...++.|.++++|.++++|+++..|++.+.....++++++- .+.||+++|
T Consensus 286 H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~--~vigGa~~s 363 (596)
T KOG1177|consen 286 HCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRK--GVIGGAPVS 363 (596)
T ss_pred HHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhh--heeCCCCCC
Confidence 9999889999999999999996 4689999999999999999999999999999999988999999877 999999999
Q ss_pred HhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecc
Q 039837 316 PDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQ 395 (544)
Q Consensus 316 ~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~ 395 (544)
+++++.+.....=..+...||+||++...+.....+. ......++|+.+++.+..++| +.|..++.|..|||+++|.
T Consensus 364 ~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~--~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iRGY 440 (596)
T KOG1177|consen 364 PELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDP--PEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIRGY 440 (596)
T ss_pred HHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCC--HHHHHhhhhhccccccccccc-CCCCccccCCCceEEEEec
Confidence 9999999987632347788999999977665432222 455667899999999999999 8999999999999999999
Q ss_pred cccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCC
Q 039837 396 CVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDE 475 (544)
Q Consensus 396 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 475 (544)
+.+.|||++++.|.+....+.||+|||++.+|++|.+++.||++|+|+.+|++|+|.+||+.|-+||.|.++.|++++++
T Consensus 441 ~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V~~a~VVGV~D~ 520 (596)
T KOG1177|consen 441 STMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLVKEAHVVGVPDE 520 (596)
T ss_pred hhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhhCCCeeeEEEEccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEEEEeCCCCC--CCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhhh
Q 039837 476 EAGEIPAACVVMNPNAK--ESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKMR 543 (544)
Q Consensus 476 ~~~~~~~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~~ 543 (544)
..|+.++|++.+.++.. .+.++|+.+|+.++.+|++|+.|+++++||+|.+|||+|-++|++++.+++
T Consensus 521 R~GE~VCA~vRLqe~~e~~~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKFeir~~~k~~l~ 590 (596)
T KOG1177|consen 521 RLGEEVCACVRLQEGAEGKTTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKFEIREMSKGHLG 590 (596)
T ss_pred cccceEEEEEEeeccccccccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhHHHHHHHHhhcc
Confidence 99999999999988765 488999999999999999999999999999999999999999999998764
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-75 Score=602.06 Aligned_cols=503 Identities=34% Similarity=0.539 Sum_probs=430.8
Q ss_pred CCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHh
Q 039837 32 VPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAA 111 (544)
Q Consensus 32 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~ 111 (544)
.....++.+.+.++|+.+|+++|+.+.....++||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++
T Consensus 7 ~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~ 86 (534)
T COG0318 7 MTAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRA 86 (534)
T ss_pred ccccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 34567999999999999999999998732234999999999999999999999999999999999999999999999999
Q ss_pred cCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC----CcEEEecccccccc--cCHHHHHHhhhhc-----
Q 039837 112 GGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG----LPIIVLGEERIESA--INWSELIEAADKA----- 180 (544)
Q Consensus 112 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~----- 180 (544)
|++++|+++.++..++.++++.+++++++++.+..+.+.... .............. ..++.........
T Consensus 87 Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (534)
T COG0318 87 GAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEGPGPDADAR 166 (534)
T ss_pred CEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhhccCCcccccC
Confidence 999999999999999999999999999999977433333221 11111111111111 2344443221111
Q ss_pred --CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEc
Q 039837 181 --GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMM 258 (544)
Q Consensus 181 --~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 258 (544)
.....+...+||||||.||||++||+++..+.......+...+...|++++++|++|.+|+...++.+++.|+++++.
T Consensus 167 ~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~ 246 (534)
T COG0318 167 PVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLL 246 (534)
T ss_pred CCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeC
Confidence 123345678899999999999999999999988887777211789999999999999999988888889999999998
Q ss_pred C--ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccc-cccccEEEecCCCCHhHHHHHHhhcCCCeEEecc
Q 039837 259 N--RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSK-LQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAY 335 (544)
Q Consensus 259 ~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~-l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 335 (544)
+ .+++..++..+.++++|++..+|+++..|+++.......+.+ +|. ++.||++++++++++|.+.|+...+++.|
T Consensus 247 ~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~--~~~gg~~~~~~~~~~~~~~~~~~~i~~~Y 324 (534)
T COG0318 247 SPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRL--VLSGGAPLPPELLERFEERFGPIAILEGY 324 (534)
T ss_pred CCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEE--EEecCCcCCHHHHHHHHHHhCCCceEEee
Confidence 8 589999999999999999999999999999988776666665 555 99999999999999999999656899999
Q ss_pred cCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCC
Q 039837 336 GLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKN 415 (544)
Q Consensus 336 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 415 (544)
|+||+++.++...... . ....++.|.|+|+++++|+|++++..++ |++|||+++||+++.|||++|+.|...|+.+
T Consensus 325 G~TE~~~~~~~~~~~~-~--~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~~~ 400 (534)
T COG0318 325 GLTETSPVVTINPPDD-L--LAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFDED 400 (534)
T ss_pred cccccCceeecCCCch-h--hhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChHHHHHhhccC
Confidence 9999997776654211 0 2356677999999999999976665666 9999999999999999999999999988667
Q ss_pred CeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCC--CCC
Q 039837 416 GWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPN--AKE 493 (544)
Q Consensus 416 ~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--~~~ 493 (544)
|||+|||+|++|++|++++.||.+|+|+.+|++|+|.+||.++.+||.|.+++|++++++..|+.++|++++.++ ...
T Consensus 401 gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~~~~ 480 (534)
T COG0318 401 GWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGDAEL 480 (534)
T ss_pred CeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999876 345
Q ss_pred CHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 494 SEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 494 ~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
+.+++.++++++++.+++|..+++++++|+|++||++|+.|++.+..
T Consensus 481 ~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 481 TAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred CHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 88999999999999999999999999999999999999999999875
No 4
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=9.9e-74 Score=562.30 Aligned_cols=485 Identities=26% Similarity=0.384 Sum_probs=411.2
Q ss_pred CCHHHH-HHhhhhh-cCCceEEEEccCC---ceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHH
Q 039837 36 VTLPDF-VLQDAEL-YADKVAFVEAVSG---KAYTYAQVARDTRGFAKALRS-LGLRKGQVVIVVLPNVAEYGIVALGIM 109 (544)
Q Consensus 36 ~~l~~~-l~~~a~~-~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~~L~~-~Gi~~gd~V~i~~~n~~~~~~~~lA~~ 109 (544)
.|+... ++++.+. .+|++|+++..+. +++||+||++.+.++|+.|++ .|+ +||||++++|+.+++++++|||+
T Consensus 8 lN~~~n~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~ 86 (528)
T COG0365 8 LNLALNALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATA 86 (528)
T ss_pred eechhhhhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHH
Confidence 344333 4555543 4789999875322 789999999999999999987 578 99999999999999999999999
Q ss_pred HhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCC---------cEEEecccccccccCHHHHHHhhhh-
Q 039837 110 AAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGL---------PIIVLGEERIESAINWSELIEAADK- 179 (544)
Q Consensus 110 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~- 179 (544)
++|++.+|+.+.++++.++.++++++++++|+.+........... .++++.... ..|.+.......
T Consensus 87 riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~----~~~~~~~~~~~~~ 162 (528)
T COG0365 87 RIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG----LWYDEAVEKASEK 162 (528)
T ss_pred HcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc----ccHHHHhhccCCC
Confidence 999999999999999999999999999999998876654443221 122222111 555555544221
Q ss_pred -----cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhcc-ccCCcccCccEEEEecchhHHHHHHHHHHhhHhccc
Q 039837 180 -----AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLF-SVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKG 253 (544)
Q Consensus 180 -----~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~ 253 (544)
.....+....+||||||.||||+++|..++........ .+ .+.++|++++..+..|++|....++.+|..|+
T Consensus 163 ~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~--~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Ga 240 (528)
T COG0365 163 FEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHG--DLLPGDRFWNSSDPGWIYGLWYSVFSPLASGA 240 (528)
T ss_pred CCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhh--CCCCCCEEEeCCCchhhhCchHHHHHHHhcCC
Confidence 12233456789999999999999999977766655443 34 56699999999999999999999999999999
Q ss_pred eEEEcCc--c-CHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCe
Q 039837 254 KVVMMNR--F-ELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQ 330 (544)
Q Consensus 254 ~~~~~~~--~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~ 330 (544)
++++.+. + ++..+++.|+++++|.+++.|+.++.|.+......++++++|. +.++||++++++++++.+.+ +++
T Consensus 241 t~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~--~~SaGEPLnpe~~~w~~~~~-g~~ 317 (528)
T COG0365 241 TTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRV--LGSAGEPLNPEAFEWFYSAL-GVW 317 (528)
T ss_pred eEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhhee--eeccCCCCCHHHHHHHHHHh-CCC
Confidence 9998863 2 4899999999999999999999999999987666788999888 99999999999999999999 899
Q ss_pred EEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecc--cccccccCChhhh
Q 039837 331 VQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQ--CVMQGYYNNEEET 408 (544)
Q Consensus 331 i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~--~~~~gy~~~~~~~ 408 (544)
|.+.||+||+|.+..... + ....++.|.|+||+++.++|++ |++++.|+ |+|+++.+ +.+++||++|+.+
T Consensus 318 i~d~~gqTEtg~~~~~~~----~--~~~~g~~g~p~pG~~~~vvdd~-g~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~ 389 (528)
T COG0365 318 ILDIYGQTETGMGFIAGR----P--PVKNGSSGLPLPGYAVRRVDDE-GNPVPPGV-GELVVRLPWPGMALTYWNDPERY 389 (528)
T ss_pred EeccccccccCccccCCC----C--CcCCCCCCCCCCCceeEEECCC-CCcCCCCc-eEEEEeCCCchhhhhhhCCHHHH
Confidence 999999999995554432 1 3345566999999999999954 99999999 99999986 8899999999999
Q ss_pred hcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeC
Q 039837 409 ARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMN 488 (544)
Q Consensus 409 ~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 488 (544)
.+.+.+. ||.|||.+++|+||++++.||.||+||++|+++.+.|||++|.+||.|.|++|++++++..|+.+.+||+++
T Consensus 390 ~~~y~~~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~ 468 (528)
T COG0365 390 KEAYFGR-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLA 468 (528)
T ss_pred HHHHhhc-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEec
Confidence 8887444 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC--HHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 489 PNAKES--EDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 489 ~~~~~~--~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
++...+ .++|++++++.+.++..|..++++++||+|.||||.|+.||+.+.
T Consensus 469 ~g~~~~~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~ 521 (528)
T COG0365 469 AGVEPNELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILH 521 (528)
T ss_pred CCCChHHHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHh
Confidence 876544 356666777777789999999999999999999999999999876
No 5
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=3.8e-72 Score=582.28 Aligned_cols=524 Identities=81% Similarity=1.233 Sum_probs=448.2
Q ss_pred CcceeeecCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Q 039837 18 DEEHIFRSRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPN 97 (544)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n 97 (544)
+.+.++.+..+..+.+...|+.+.|.++|+.+|+++|+.+...++.+||+||.+++.++|+.|.+.|+++||+|+++++|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~ 89 (546)
T PLN02330 10 DNEHIFRSRYPSVPVPDKLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPN 89 (546)
T ss_pred ccceeeccCCCCCCCCCCCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence 34456677777777777889999999999999999999875446799999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHHhh
Q 039837 98 VAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAA 177 (544)
Q Consensus 98 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (544)
+.+++++++||+++|++++|+++..+.+++.++++.++++++++++.....+.......+.++.........+.++....
T Consensus 90 ~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 169 (546)
T PLN02330 90 VAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEEKIEGAVNWKELLEAA 169 (546)
T ss_pred chHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCCCCCCcccHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999888777766666666543333445566555432
Q ss_pred hhc---------CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhh
Q 039837 178 DKA---------GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCAT 248 (544)
Q Consensus 178 ~~~---------~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~ 248 (544)
... .........+||||||.||||.+||+++...+..............+..+.++|++|.+++...++.+
T Consensus 170 ~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~ 249 (546)
T PLN02330 170 DRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCAT 249 (546)
T ss_pred cccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHH
Confidence 111 01122345789999999999999999998776543322222233456889999999999987788899
Q ss_pred HhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCC
Q 039837 249 LRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPG 328 (544)
Q Consensus 249 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~ 328 (544)
+..|+++++.+.+++..+++.++++++|++.++|+++..|++.......++.++++|.+++||++++++++++|.+.|++
T Consensus 250 l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~ 329 (546)
T PLN02330 250 LRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPG 329 (546)
T ss_pred hhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999876555555655556669999999999999999999989
Q ss_pred CeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhh
Q 039837 329 VQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEET 408 (544)
Q Consensus 329 ~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~ 408 (544)
+++++.||+||++.+.................++|.|+++++++++|++++.+++.|+.|||+++|+.++.||++++..+
T Consensus 330 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy~~~~~~~ 409 (546)
T PLN02330 330 VQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVMQGYYNNKEET 409 (546)
T ss_pred CeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecchhhhhhccCccch
Confidence 99999999999986544322111110123446899999999999999878999999999999999999999999999999
Q ss_pred hcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeC
Q 039837 409 ARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMN 488 (544)
Q Consensus 409 ~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 488 (544)
...++.+|||+|||+|++++||.+++.||.+|+|+++|++|+|.+||++|.+++.|.+++|++++++..++.++++++..
T Consensus 410 ~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~ 489 (546)
T PLN02330 410 DRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPAACVVIN 489 (546)
T ss_pred hhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEeccccccCceeEEEEEEC
Confidence 88888899999999999999999999999999999999999999999999999999999999999888888999999988
Q ss_pred CCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 489 PNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 489 ~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
++...+.+++.++++++|+.++.|..+++++++|+|.+||++|++|++++...
T Consensus 490 ~~~~~~~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 490 PKAKESEEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred CCCCCCHHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 76667788999999999999999999999999999999999999999998654
No 6
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=4.3e-71 Score=575.40 Aligned_cols=517 Identities=36% Similarity=0.584 Sum_probs=429.8
Q ss_pred ceeeecCCCCCCCCC--CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcC
Q 039837 20 EHIFRSRHPAVPVPE--NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRS-LGLRKGQVVIVVLP 96 (544)
Q Consensus 20 ~~~~~~~~~~~~~~~--~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~Gi~~gd~V~i~~~ 96 (544)
..++.+..++.+.+. ..++.+.+... +.+|+++|+++...+.++||+||.++++++|++|++ .|+++||+|+++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~ 100 (560)
T PLN02574 22 TGIYSSKHPPVPLPSDPNLDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLP 100 (560)
T ss_pred CeeecCCCCCCCCCCCCCCCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECC
Confidence 344554433333332 34555555554 679999999986545689999999999999999998 99999999999999
Q ss_pred CCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccc-----cccccCHH
Q 039837 97 NVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEER-----IESAINWS 171 (544)
Q Consensus 97 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 171 (544)
|++++++++|||+++|++++|++|.++.+++.++++.+++++++++.+....+......++.++... ......+.
T Consensus 101 n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (560)
T PLN02574 101 NSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVPVIGVPENYDFDSKRIEFPKFY 180 (560)
T ss_pred CcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCcEEecCcccccccCccCcccHH
Confidence 9999999999999999999999999999999999999999999999887776665554544432110 01112333
Q ss_pred HHHHhhhh------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccC---CcccCccEEEEecchhHHHHHH
Q 039837 172 ELIEAADK------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVV---PEMIGQVTTLGLIPFFHIYGIT 242 (544)
Q Consensus 172 ~~~~~~~~------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~ 242 (544)
.+...... ..........+||||||.||||++||+++.+.+........ ......++++..+|++|.+|+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 260 (560)
T PLN02574 181 ELIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLS 260 (560)
T ss_pred HHhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHH
Confidence 33322111 11122335689999999999999999999887765542110 0123567889999999999987
Q ss_pred HHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCC-CccCccccccccEEEecCCCCHhHHHH
Q 039837 243 GICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIV-DEFDLSKLQLRAVMTAAAPLAPDLLSS 321 (544)
Q Consensus 243 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~~l~~~~v~~~G~~~~~~~~~~ 321 (544)
..++.++..|+++++.+.+++..+++.++++++|++.++|+++..|++.... ...++++++. +++||++++++++++
T Consensus 261 ~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~--~~~gg~~l~~~~~~~ 338 (560)
T PLN02574 261 LFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQ--VSCGAAPLSGKFIQD 338 (560)
T ss_pred HHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceE--EEEecccCCHHHHHH
Confidence 7788888999999999889999999999999999999999999999886542 3445677666 999999999999999
Q ss_pred HHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccc
Q 039837 322 FEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGY 401 (544)
Q Consensus 322 ~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy 401 (544)
+.+.++++.+++.||+||++.+.+.... .......+++|.|+++++++|+|++++.+++.|+.|||+|+|+.++.||
T Consensus 339 ~~~~~~~~~v~~~YG~tE~~~~~~~~~~---~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~~~~GY 415 (560)
T PLN02574 339 FVQTLPHVDFIQGYGMTESTAVGTRGFN---TEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELWIQGPGVMKGY 415 (560)
T ss_pred HHHHCCCCcEEecccccccCceeecCCC---ccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEEEEECcchhhhh
Confidence 9999988999999999999865442211 1122456789999999999999988899999999999999999999999
Q ss_pred cCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCcee
Q 039837 402 YNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIP 481 (544)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~ 481 (544)
+++++.+...|+.+|||+|||+|+++++|++++.||.+|+||++|++|++.+||++|.+||+|.+++|++++++..++.+
T Consensus 416 ~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g~~~ 495 (560)
T PLN02574 416 LNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTAVPDKECGEIP 495 (560)
T ss_pred cCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEccccCCCCcce
Confidence 99999999888889999999999999999999999999999999999999999999999999999999999988888889
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhh
Q 039837 482 AACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 542 (544)
Q Consensus 482 ~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~ 542 (544)
+++++..++...+.+++.++++++|+.++.|..++++++||+|++||++|+.|++++.+..
T Consensus 496 ~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~ 556 (560)
T PLN02574 496 VAFVVRRQGSTLSQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSV 556 (560)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhcc
Confidence 9999988777777899999999999999999999999999999999999999999987643
No 7
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=3.7e-71 Score=574.05 Aligned_cols=514 Identities=41% Similarity=0.720 Sum_probs=436.8
Q ss_pred eecCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHH
Q 039837 23 FRSRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYG 102 (544)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~ 102 (544)
+.+..+..+.+...|+.+.+.++++.+|+++|+++...++++||+||.++++++|++|.+.|+++||+|+++++|+.+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~ 89 (537)
T PLN02246 10 FRSKLPDIYIPNHLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFV 89 (537)
T ss_pred ecCCCCCCCCCCCCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHH
Confidence 44445555667788999999999999999999998655678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC----CCcEEEecccccccccCHHHHHHhhh
Q 039837 103 IVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL----GLPIIVLGEERIESAINWSELIEAAD 178 (544)
Q Consensus 103 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (544)
++++||+++|++++|+++.++.+++..+++.+++++++++......+... ....+.++... .....+........
T Consensus 90 ~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~ 168 (537)
T PLN02246 90 LAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPP-EGCLHFSELTQADE 168 (537)
T ss_pred HHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCC-CCceeHHHHhcCCC
Confidence 99999999999999999999999999999999999999988766554332 23344443211 12223333322111
Q ss_pred h------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhcccc--CCcccCccEEEEecchhHHHHHHHHHHhhHh
Q 039837 179 K------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSV--VPEMIGQVTTLGLIPFFHIYGITGICCATLR 250 (544)
Q Consensus 179 ~------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~ 250 (544)
. ..........+||||||.||||++||+++........... ...+..+++++..+|++|.+++...++.++.
T Consensus 169 ~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~ 248 (537)
T PLN02246 169 NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLR 248 (537)
T ss_pred CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHh
Confidence 0 0112223457899999999999999999988776543311 1167889999999999999998777888999
Q ss_pred ccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCe
Q 039837 251 NKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQ 330 (544)
Q Consensus 251 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~ 330 (544)
.|+++++.+..++..+++.++++++|++.++|+++..|.+........+++++. +++||+++++++.+.+.+.|+++.
T Consensus 249 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~--~~~gg~~l~~~~~~~~~~~~~~~~ 326 (537)
T PLN02246 249 VGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRM--VLSGAAPLGKELEDAFRAKLPNAV 326 (537)
T ss_pred cCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeE--EEEecCcCCHHHHHHHHHHcCCCe
Confidence 999999999889999999999999999999999999998876555556677776 999999999999999999998899
Q ss_pred EEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhc
Q 039837 331 VQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETAR 410 (544)
Q Consensus 331 i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~ 410 (544)
+++.||+||++.+++..............+++|+|+++++++++|++++.+++.|+.|||+++|+.++.||+++++.+..
T Consensus 327 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~ 406 (537)
T PLN02246 327 LGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGYLNDPEATAN 406 (537)
T ss_pred EeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCchhccccCCchhhhh
Confidence 99999999998765432211111122345689999999999999977899999999999999999999999999999998
Q ss_pred ccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCC
Q 039837 411 TIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPN 490 (544)
Q Consensus 411 ~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 490 (544)
.++.++||+|||+|+++++|++++.||.+|+||++|.+|+|.+||+.|.++|+|.+++|++.++...++.++++++..++
T Consensus 407 ~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 486 (537)
T PLN02246 407 TIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVAFVVRSNG 486 (537)
T ss_pred cccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCceeEEEEEeCCC
Confidence 88889999999999999999999999999999999999999999999999999999999999888888889999988877
Q ss_pred CCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 491 AKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 491 ~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
...+.++++++++++++.++.|..++++++||+|++||++|++|++++.
T Consensus 487 ~~~~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~ 535 (537)
T PLN02246 487 SEITEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLA 535 (537)
T ss_pred CCCCHHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHh
Confidence 6677899999999999999999999999999999999999999999875
No 8
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-71 Score=579.21 Aligned_cols=485 Identities=26% Similarity=0.376 Sum_probs=417.5
Q ss_pred CCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCee
Q 039837 36 VTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF 115 (544)
Q Consensus 36 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 115 (544)
.++.++|.+.|+.+|+++|+++. ++++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~--~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~ 126 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDE--RGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARI 126 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEEC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEE
Confidence 48999999999999999999986 6799999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----CcEEEecccc----cccccCHHHHHHhhhhc----CC
Q 039837 116 SGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----LPIIVLGEER----IESAINWSELIEAADKA----GN 182 (544)
Q Consensus 116 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~----~~ 182 (544)
+|+++.++.+++.++++.+++++++++++....+.... +..+...... ......++++....... ..
T Consensus 127 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (549)
T PRK07788 127 ILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGSSTAPLPKPP 206 (549)
T ss_pred EEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcCCCCCCCCCCC
Confidence 99999999999999999999999999988766654321 1222211111 12233455544321111 11
Q ss_pred CCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccC
Q 039837 183 NFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFE 262 (544)
Q Consensus 183 ~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~ 262 (544)
.......+||||||.||||.+||+++.+.+......+ .+..+++++...|++|.+|+ ..++.++..|+++++...++
T Consensus 207 ~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~ 283 (549)
T PRK07788 207 KPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRV--PFRAGETTLLPAPMFHATGW-AHLTLAMALGSTVVLRRRFD 283 (549)
T ss_pred CCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhC--CCCcCCeEEEccchHHHHHH-HHHHHHHHhCCEEEECCCCC
Confidence 2233567899999999999999999998877776666 67788999999999999998 45677899999999988889
Q ss_pred HHHHHHHHHHcCceeeecchHHHHHHhcCCCC--CccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccc
Q 039837 263 LRAFLDALITHEVTFAPIVPPIILSLVKDPIV--DEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEH 340 (544)
Q Consensus 263 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 340 (544)
+..+++.++++++|++.++|+++..|++.... ...++++++. +++||+++++++.++|.+.| +..+++.||+||+
T Consensus 284 ~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~--i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG~TE~ 360 (549)
T PRK07788 284 PEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKI--IFVSGSALSPELATRALEAF-GPVLYNLYGSTEV 360 (549)
T ss_pred HHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeE--EEEeCCCCCHHHHHHHHHHh-CccceeccCcchh
Confidence 99999999999999999999999999886553 4445677777 99999999999999999998 7889999999999
Q ss_pred cccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeec
Q 039837 341 SCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHT 420 (544)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~T 420 (544)
+....... .......+++|+|+++++++++| +++++++.|+.|||+++|+.++.||++++.. . . .+|||+|
T Consensus 361 ~~~~~~~~----~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~--~-~-~~g~~~T 431 (549)
T PRK07788 361 AFATIATP----EDLAEAPGTVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEGYTDGRDK--Q-I-IDGLLSS 431 (549)
T ss_pred chhhccCh----hhhhhcCCCcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCccccccCCCcc--c-c-cCCceec
Confidence 86554332 11223557899999999999999 6889999999999999999999999998765 1 2 4789999
Q ss_pred CceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHH
Q 039837 421 GDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMD 500 (544)
Q Consensus 421 GD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 500 (544)
||+|+++++|++++.||.||+||++|++|+|.+||++|.++|+|.+++|++.+++..++.+++++++.++...+.+++.+
T Consensus 432 GDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~ 511 (549)
T PRK07788 432 GDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAALDEDAIKD 511 (549)
T ss_pred CceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988899999999998877788899999
Q ss_pred HHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHH
Q 039837 501 FVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDK 537 (544)
Q Consensus 501 ~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~ 537 (544)
+++++|+.+++|..++++++||+|++||++|++|+++
T Consensus 512 ~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 512 YVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred HHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 9999999999999999999999999999999999763
No 9
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=3.1e-71 Score=576.84 Aligned_cols=499 Identities=24% Similarity=0.316 Sum_probs=411.5
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhc
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAG 112 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G 112 (544)
....|+.+.|.+.++++|+++|+++. ++++||+||.+++.++|++|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 4 ~~~~~~~~~~~~~~~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~G 81 (563)
T PLN02860 4 HSQAHICQCLTRLATLRGNAVVTISG--NRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAG 81 (563)
T ss_pred hhhhHHHHHHHHHHHhcCCceEEecC--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhcc
Confidence 34568999999999999999999875 6899999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC---C---CcEEE-ecccccc------cccCHHHHHHh---
Q 039837 113 GVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL---G---LPIIV-LGEERIE------SAINWSELIEA--- 176 (544)
Q Consensus 113 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~---~~~~~-~~~~~~~------~~~~~~~~~~~--- 176 (544)
++++|+++.++.+++.++++++++++++++++........ . +...+ .++.... .....+.+...
T Consensus 82 av~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (563)
T PLN02860 82 GIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALG 161 (563)
T ss_pred EEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCccc
Confidence 9999999999999999999999999999987642222111 1 11111 1211100 00111111000
Q ss_pred ----hhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhcc
Q 039837 177 ----ADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNK 252 (544)
Q Consensus 177 ----~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G 252 (544)
...........+.+||||||.||||++||+++..+.......+ ++..+++++..+|++|.+|+ ..++.++..|
T Consensus 162 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G 238 (563)
T PLN02860 162 TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIV--GYGEDDVYLHTAPLCHIGGL-SSALAMLMVG 238 (563)
T ss_pred cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhc--CCCCCCEEEEecCchhhccH-HHHHHHHHcC
Confidence 0001122334567999999999999999999988766655555 67888999999999999998 4678899999
Q ss_pred ceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCC--ccCccccccccEEEecCCCCHhHHHHHHhhcCCCe
Q 039837 253 GKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVD--EFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQ 330 (544)
Q Consensus 253 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~ 330 (544)
+++++.+.+++..+++.++++++|++.++|+++..|++..... ...+++++. +++||+++++++.++|.+.|++++
T Consensus 239 ~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~--~~~gG~~l~~~~~~~~~~~~~~~~ 316 (563)
T PLN02860 239 ACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRK--ILNGGGSLSSRLLPDAKKLFPNAK 316 (563)
T ss_pred ceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeE--EEeCCCcCCHHHHHHHHHhcCCCc
Confidence 9999998899999999999999999999999999998754322 234566666 999999999999999999998899
Q ss_pred EEecccCccccccccccCCCCC------------------CCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEE
Q 039837 331 VQEAYGLTEHSCITLTYGDPAN------------------PSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCV 392 (544)
Q Consensus 331 i~~~yG~tE~~~~~~~~~~~~~------------------~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v 392 (544)
+++.||+||++..+........ ........++|+|+++++++|++++ +|+.|||++
T Consensus 317 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~Gel~v 390 (563)
T PLN02860 317 LFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVGRILT 390 (563)
T ss_pred eecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC------CCceeEEEE
Confidence 9999999999865543221110 0001123468999999999999843 588999999
Q ss_pred ecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEee
Q 039837 393 RSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSL 472 (544)
Q Consensus 393 ~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 472 (544)
+|+.++.|||++++.+...+..+|||+|||+|+++++|++++.||.+|+||++|++|+|.+||++|.++|+|.+++|++.
T Consensus 391 ~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~ 470 (563)
T PLN02860 391 RGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVVVVGV 470 (563)
T ss_pred ecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcceeEEEEE
Confidence 99999999999999999888889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceeEEEEEeCCCC--------------CCCHHHHHHHHHh-cccCCCceeEEEEe-ecCCCCCCcccchHHHHH
Q 039837 473 PDEEAGEIPAACVVMNPNA--------------KESEDDIMDFVAS-NVATYKKVRVLHFV-DGIPKSHSGKIMRRILKD 536 (544)
Q Consensus 473 ~~~~~~~~~~~~v~~~~~~--------------~~~~~~l~~~l~~-~l~~~~~p~~~~~~-~~~P~t~~GKi~r~~l~~ 536 (544)
+++..++.+++++++.++. ..+.+++.+++++ .|+.|++|..++++ ++||+|++||++|++|++
T Consensus 471 ~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GKi~r~~L~~ 550 (563)
T PLN02860 471 PDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGKIRRDEVRR 550 (563)
T ss_pred ecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCcccchhHHHHHH
Confidence 9988899999999987652 3456789999987 59999999988765 679999999999999999
Q ss_pred HHHHhhhC
Q 039837 537 KMLEKMRK 544 (544)
Q Consensus 537 ~~~~~~~~ 544 (544)
++.+.+++
T Consensus 551 ~~~~~~~~ 558 (563)
T PLN02860 551 EVLSHLQS 558 (563)
T ss_pred HHHHHHhc
Confidence 99887753
No 10
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8e-73 Score=507.82 Aligned_cols=495 Identities=25% Similarity=0.377 Sum_probs=428.2
Q ss_pred CCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 34 ENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 34 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
...+|.+.|.++|.++||++|++++ ++.+||+||.++++++|..|++.||++||+|.+.++|..+++++++|++++|+
T Consensus 26 ~d~~l~d~L~~~A~~~pdriAv~d~--~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv 103 (542)
T COG1021 26 QDRTLTDILTDHAARYPDRIAVIDG--ERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGV 103 (542)
T ss_pred cCCcHHHHHHHHHhhcCCceEEecC--cccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCc
Confidence 3568999999999999999999998 67899999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccch--------HHHhhc-C-CCcEEEecccccccccCHHHHHHhhhh----
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPI--------YEKVKG-L-GLPIIVLGEERIESAINWSELIEAADK---- 179 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--------~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 179 (544)
.+|.-=|+.-..+|..+.+..+++..|.+... ...+.. . .++.+.+..+.......+..+......
T Consensus 104 ~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~~~~~~a~~~~~a 183 (542)
T COG1021 104 APVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEAALCHPAGLFTPA 183 (542)
T ss_pred chhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhhhhhCccccCCcC
Confidence 99998888889999999999999999986542 111211 1 245555543222222222222111111
Q ss_pred --cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHH-HHHhhHhccceEE
Q 039837 180 --AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITG-ICCATLRNKGKVV 256 (544)
Q Consensus 180 --~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~ 256 (544)
......+....+.||||.||-+..||.....++..-.+.. .++.+.++++.+|..|-+.+.. ..+..+..|+++|
T Consensus 184 ~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC--~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VV 261 (542)
T COG1021 184 PPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEIC--GFDQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVV 261 (542)
T ss_pred CCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhh--CcCccceEEEecccccCCCCCCcchhheeeeccEEE
Confidence 1111223345689999999999999999988888777777 8899999999999999887643 5688999999999
Q ss_pred EcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEeccc
Q 039837 257 MMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYG 336 (544)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 336 (544)
+.+..++.....+|+++++|+.-.+|.....|++..+....+++|+++ +-+||+.+++++.+++...+ ++.+-+.||
T Consensus 262 la~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrl--lQVGGarl~~~~Arrv~~~l-gC~LQQVFG 338 (542)
T COG1021 262 LAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRL--LQVGGARLSATLARRVPAVL-GCQLQQVFG 338 (542)
T ss_pred ECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeE--EeecCcccCHHHHhhchhhh-CchHHHHhh
Confidence 999999999999999999999999999999999999999999999999 99999999999999999999 999999999
Q ss_pred CccccccccccCCCCCCCCCCCCCcccccC-CCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCC
Q 039837 337 LTEHSCITLTYGDPANPSAGSKKNSVGFIL-PNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKN 415 (544)
Q Consensus 337 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 415 (544)
|.|.-...+.. + +.......+.|+|+ |.-+++|+| ++|+++++|++|+|.++||..++|||+.|+++.+.|+.+
T Consensus 339 MAEGLvnyTRL---D-Dp~E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~ 413 (542)
T COG1021 339 MAEGLVNYTRL---D-DPPEIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDAD 413 (542)
T ss_pred hhhhhhccccc---C-CchHheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcC
Confidence 99943222221 1 22445566789888 778899999 899999999999999999999999999999999999999
Q ss_pred CeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCH
Q 039837 416 GWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESE 495 (544)
Q Consensus 416 ~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 495 (544)
|||+|||++++++||++.+.||.+|+|+.+|++|..+|||+.|..||.|.+++++++++.-.|++.|++++.++.. .+.
T Consensus 414 GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~~-~~~ 492 (542)
T COG1021 414 GFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEPP-LRA 492 (542)
T ss_pred CceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcceeEEEEecCCC-CCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988754 788
Q ss_pred HHHHHHHHhc-ccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 496 DDIMDFVASN-VATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 496 ~~l~~~l~~~-l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
.+++.++.+. +..|++|++|.+++.+|+|+-|||++++|++.+...
T Consensus 493 ~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~ 539 (542)
T COG1021 493 AQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASR 539 (542)
T ss_pred HHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhhh
Confidence 9999999876 899999999999999999999999999999988654
No 11
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.4e-70 Score=565.76 Aligned_cols=488 Identities=19% Similarity=0.255 Sum_probs=401.9
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
..++.+.|.+.++++|+++|+.+.. .+++||+||.++++++|+.|.+ .+||+|+++++|+++++++++||+++|++
T Consensus 18 ~~~~~~~~~~~~~~~p~~~a~~~~~-~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~G~v 93 (539)
T PRK06334 18 GKTVLESFLKLCSEMTTATVCWDEQ-LGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLSGKI 93 (539)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeCC-CCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhcCCe
Confidence 4689999999999999999998752 3689999999999999999987 38999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-------CcEEEecccccccccCHHHHHHh-----------
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-------LPIIVLGEERIESAINWSELIEA----------- 176 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~----------- 176 (544)
++|+++.++.+++.++++.+++++++++.+....+.+.. ..++.+++.. ....+......
T Consensus 94 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 171 (539)
T PRK06334 94 PVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVR--KELSFWEKCRIGIYMSIPFEWL 171 (539)
T ss_pred eEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhh--hhccHHHhhhhhhhhcCCchhh
Confidence 999999999999999999999999999887666554321 1223222110 00000000000
Q ss_pred -----hhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhc
Q 039837 177 -----ADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRN 251 (544)
Q Consensus 177 -----~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~ 251 (544)
...........+.+||||||.||||++||+++..........+ +...+|++++++|++|.+|+...++.++..
T Consensus 172 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~ 249 (539)
T PRK06334 172 MRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFF--SPKEDDVMMSFLPPFHAYGFNSCTLFPLLS 249 (539)
T ss_pred hhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc--CCCCCceEEEecchHhhhhhHHHHHHHHHc
Confidence 0011223334568999999999999999999998877766665 678899999999999999987777889999
Q ss_pred cceEEEcC-ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCe
Q 039837 252 KGKVVMMN-RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQ 330 (544)
Q Consensus 252 G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~ 330 (544)
|+++++.. .+++..+++.|+++++|++.++|+++..|++........+++++. +++||+++++++.+++.+.|+++.
T Consensus 250 G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~--i~~gG~~l~~~~~~~~~~~~~~~~ 327 (539)
T PRK06334 250 GVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRF--VVIGGDAFKDSLYQEALKTFPHIQ 327 (539)
T ss_pred CCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccE--EEECCccCCHHHHHHHHHHCCCCe
Confidence 99998875 578999999999999999999999999998866544556777777 999999999999999999998899
Q ss_pred EEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhc
Q 039837 331 VQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETAR 410 (544)
Q Consensus 331 i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~ 410 (544)
+++.||+||++.+++.... .......++|+|+++++++|+|++++.+++.|+.|||+|+|++++.|||++++.+..
T Consensus 328 i~~~YG~TE~~~~~~~~~~----~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~ 403 (539)
T PRK06334 328 LRQGYGTTECSPVITINTV----NSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQGF 403 (539)
T ss_pred EEecccccccCceEEeccC----CCCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCcccccc
Confidence 9999999999876654321 122334679999999999999977789999999999999999999999999886543
Q ss_pred c-cCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccc------eEEEeecCCCCCceeEE
Q 039837 411 T-IDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVED------AAVVSLPDEEAGEIPAA 483 (544)
Q Consensus 411 ~-~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~------~~v~~~~~~~~~~~~~~ 483 (544)
. .++++||+|||+|+++++|++++.||.+|+||++|++|+|.+||++|.+||+|.+ ++|++.++.. ..+++
T Consensus 404 ~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~~--~~~~~ 481 (539)
T PRK06334 404 VELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGEK--VRLCL 481 (539)
T ss_pred eeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCceEEEcCCCCc--eEEEE
Confidence 2 2357899999999999999999999999999999999999999999999999987 6777766431 23444
Q ss_pred EEEeCCCCCCCHHHHHHHHHhc-ccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhh
Q 039837 484 CVVMNPNAKESEDDIMDFVASN-VATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 542 (544)
Q Consensus 484 ~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~ 542 (544)
+++. ..+.+++.++++++ ++.+++|..++++++||+|++||++|++|++.....+
T Consensus 482 ~~~~----~~~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 537 (539)
T PRK06334 482 FTTF----PTSISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALAKSLF 537 (539)
T ss_pred EEec----cCChHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHHHHHHHhh
Confidence 4442 23567899999886 7899999999999999999999999999999866543
No 12
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=5.1e-70 Score=574.87 Aligned_cols=499 Identities=20% Similarity=0.291 Sum_probs=408.4
Q ss_pred CCCCHH-HHHHhhhh-hcCCceEEEEcc----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHH
Q 039837 34 ENVTLP-DFVLQDAE-LYADKVAFVEAV----SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALG 107 (544)
Q Consensus 34 ~~~~l~-~~l~~~a~-~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA 107 (544)
...|+. .+|+++++ .+|+++|+++.. .++++||+||.+++.++|++|++.|+++||+|+++++|++++++++||
T Consensus 85 ~~~N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA 164 (666)
T PLN02654 85 GKTNICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLA 164 (666)
T ss_pred CEeeHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 345664 45556665 489999998632 136899999999999999999999999999999999999999999999
Q ss_pred HHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHH---------h----hc-----CCCcE-EEeccccc----
Q 039837 108 IMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEK---------V----KG-----LGLPI-IVLGEERI---- 164 (544)
Q Consensus 108 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~---------~----~~-----~~~~~-~~~~~~~~---- 164 (544)
|+++|++++|+++.++.+++..++++++++++|+++..... + .. ..... +..+....
T Consensus 165 ~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (666)
T PLN02654 165 CARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKRE 244 (666)
T ss_pred HHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccccccc
Confidence 99999999999999999999999999999999998764221 1 00 00111 11111000
Q ss_pred ------ccccCHHHHHHhhhh------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHH-HHhhccccCCcccCccEEEE
Q 039837 165 ------ESAINWSELIEAADK------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVAN-LCSTLFSVVPEMIGQVTTLG 231 (544)
Q Consensus 165 ------~~~~~~~~~~~~~~~------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 231 (544)
.....++++...... ........+.+||||||.||||+++|.+++.. .......+ ++.++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~--~~~~~d~~~~ 322 (666)
T PLN02654 245 DTKWQEGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAF--DYKPTDVYWC 322 (666)
T ss_pred ccccccCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhc--CCCCCcEEEE
Confidence 011123333222110 12233446789999999999999999997643 33344444 7788999999
Q ss_pred ecchhHHHHHHHHHHhhHhccceEEEcCc----cCHHHHHHHHHHcCceeeecchHHHHHHhcCCC--CCccCccccccc
Q 039837 232 LIPFFHIYGITGICCATLRNKGKVVMMNR----FELRAFLDALITHEVTFAPIVPPIILSLVKDPI--VDEFDLSKLQLR 305 (544)
Q Consensus 232 ~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~ 305 (544)
..|++|.+|....++.+|..|+++++.+. .++..+++.|+++++|++.++|+++..|.+... ....+++++|.
T Consensus 323 ~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~- 401 (666)
T PLN02654 323 TADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRV- 401 (666)
T ss_pred cCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeE-
Confidence 99999999987888899999999999763 478999999999999999999999999987653 23346677777
Q ss_pred cEEEecCCCCHhHHHHHHhhcCC--CeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCC
Q 039837 306 AVMTAAAPLAPDLLSSFEKKFPG--VQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLP 383 (544)
Q Consensus 306 ~v~~~G~~~~~~~~~~~~~~~~~--~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~ 383 (544)
++++|+++++++++++.+.+++ +.+.+.||+||+++..+... +. ......+++|+|++|++++|+| ++|++++
T Consensus 402 -i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~-~~--~~~~~~gs~G~p~~g~~v~i~d-~~g~~~~ 476 (666)
T PLN02654 402 -LGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL-PG--AWPQKPGSATFPFFGVQPVIVD-EKGKEIE 476 (666)
T ss_pred -EEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccC-CC--CCCCCCCccCCCCCCceEEEEC-CCCCCCC
Confidence 9999999999999999998842 78999999999987654322 10 0234567899999999999999 6788999
Q ss_pred CCCCceEEEec--ccccccccCChhhhhcccC--CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHh
Q 039837 384 SNTPGELCVRS--QCVMQGYYNNEEETARTID--KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILL 459 (544)
Q Consensus 384 ~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~ 459 (544)
.++.|||++++ |+++.|||++++.+...+. .+|||+|||+|++|+||+++++||+||+||++|++|+|.+||++|.
T Consensus 477 ~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~ 556 (666)
T PLN02654 477 GECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALV 556 (666)
T ss_pred CCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHH
Confidence 88999999999 7899999999998876542 2789999999999999999999999999999999999999999999
Q ss_pred cCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCH---HHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHH
Q 039837 460 THPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESE---DDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKD 536 (544)
Q Consensus 460 ~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~ 536 (544)
+||+|.+++|++++++..|+.++++|++.++...+. ++|.++++++|+.+++|..++++++||+|.+||++|+.|++
T Consensus 557 ~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~ 636 (666)
T PLN02654 557 SHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 636 (666)
T ss_pred hCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHHH
Confidence 999999999999999988999999999988755443 37888999999999999999999999999999999999999
Q ss_pred HHHH
Q 039837 537 KMLE 540 (544)
Q Consensus 537 ~~~~ 540 (544)
.+..
T Consensus 637 ~~~~ 640 (666)
T PLN02654 637 IASR 640 (666)
T ss_pred HHcC
Confidence 8765
No 13
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.8e-69 Score=569.04 Aligned_cols=497 Identities=28% Similarity=0.440 Sum_probs=414.3
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEc------cCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHH
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEA------VSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVAL 106 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~------~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~l 106 (544)
..+.|+.++|.+.|+.+|+++|+++. ..++++||+||.+++.++|++|++.|+++||+|+++++|++++++++|
T Consensus 22 ~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~l 101 (632)
T PRK07529 22 DLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALW 101 (632)
T ss_pred cCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 44568999999999999999999863 124789999999999999999999999999999999999999999999
Q ss_pred HHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccch-----HHHhh----cC-CCc-EEEecccc------------
Q 039837 107 GIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPI-----YEKVK----GL-GLP-IIVLGEER------------ 163 (544)
Q Consensus 107 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~----~~-~~~-~~~~~~~~------------ 163 (544)
||+++| +++|+++.++.+++.++++.+++++++++... ...+. .. .++ ++.++...
T Consensus 102 A~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 180 (632)
T PRK07529 102 GGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPL 180 (632)
T ss_pred HHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCcccccccccccccc
Confidence 999999 57999999999999999999999999997543 11221 11 122 22222111
Q ss_pred -----cccccCHHHHHHhhhhc--------CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEE
Q 039837 164 -----IESAINWSELIEAADKA--------GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTL 230 (544)
Q Consensus 164 -----~~~~~~~~~~~~~~~~~--------~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~ 230 (544)
......+.......... .........+||||||.||+|.+||+++.+++......+ ....+++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~--~~~~~d~~l 258 (632)
T PRK07529 181 IRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLL--GLGPGDTVF 258 (632)
T ss_pred cccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhc--CCCCCCEEE
Confidence 11122344433321110 112334567899999999999999999998877666655 668899999
Q ss_pred EecchhHHHHHHHHHHhhHhccceEEEcCcc---C---HHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCcccccc
Q 039837 231 GLIPFFHIYGITGICCATLRNKGKVVMMNRF---E---LRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQL 304 (544)
Q Consensus 231 ~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~---~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~ 304 (544)
+.+|++|.+++...++.++..|+++++.++. + ...+++.++++++|++.++|+++..|++.... ..++++++.
T Consensus 259 ~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-~~~~~slr~ 337 (632)
T PRK07529 259 CGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD-GHDISSLRY 337 (632)
T ss_pred EecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc-CCCccceEE
Confidence 9999999999888889999999999997642 1 35788999999999999999999999886542 345677777
Q ss_pred ccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeC-CCC---C
Q 039837 305 RAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINP-ETG---K 380 (544)
Q Consensus 305 ~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~~~---~ 380 (544)
+++||+++++++.++|.+.+ ++++++.||+||++.++.... .......+++|.|+|++.++++.. ++| .
T Consensus 338 --v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~----~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~ 410 (632)
T PRK07529 338 --ALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNP----PDGERRIGSVGLRLPYQRVRVVILDDAGRYLR 410 (632)
T ss_pred --EEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCC----ccccccCCCcccccCCceEEEEEcCCCCcccc
Confidence 99999999999999999988 899999999999986654432 112335688999999999998531 455 7
Q ss_pred cCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhc
Q 039837 381 SLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLT 460 (544)
Q Consensus 381 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 460 (544)
+++.|+.|||+|+|++++.||++++. +...+..++||+|||+|++++||++++.||.+|+||++|++|+|.+||++|.+
T Consensus 411 ~~~~g~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~ 489 (632)
T PRK07529 411 DCAVDEVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLR 489 (632)
T ss_pred cCCCCCceEEEEECCCccccccCCcc-ccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHHh
Confidence 89999999999999999999998654 44555578999999999999999999999999999999999999999999999
Q ss_pred CCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhccc-CCCceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 461 HPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVA-TYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 461 ~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~-~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
||+|.+++|++.+++..|+.+++++++.++...+.+++.++++++++ .+++|..++++++||+|.+||++|++|++.+.
T Consensus 490 ~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~~GKi~r~~Lr~~~~ 569 (632)
T PRK07529 490 HPAVALAAAVGRPDAHAGELPVAYVQLKPGASATEAELLAFARDHIAERAAVPKHVRILDALPKTAVGKIFKPALRRDAI 569 (632)
T ss_pred CCCeeEEEEEeccCCCCCceeEEEEEEcCCCCCCHHHHHHHHHHhcchhccCCcEEEEecCCCCCCCCcccHHHHHHHHH
Confidence 99999999999999988999999999998888888999999999997 57999999999999999999999999999886
Q ss_pred Hh
Q 039837 540 EK 541 (544)
Q Consensus 540 ~~ 541 (544)
++
T Consensus 570 ~~ 571 (632)
T PRK07529 570 RR 571 (632)
T ss_pred HH
Confidence 54
No 14
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.5e-70 Score=573.44 Aligned_cols=493 Identities=20% Similarity=0.268 Sum_probs=397.3
Q ss_pred CCH-HHHHHhhhhh--cCCceEEEEccC----CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHH
Q 039837 36 VTL-PDFVLQDAEL--YADKVAFVEAVS----GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGI 108 (544)
Q Consensus 36 ~~l-~~~l~~~a~~--~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~ 108 (544)
.|. ...++++++. +|+++|+++..+ .+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||
T Consensus 58 ~n~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~ 137 (647)
T PTZ00237 58 LNTCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSC 137 (647)
T ss_pred eeHHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 344 4455566654 799999986421 368999999999999999999999999999999999999999999999
Q ss_pred HHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccc---------hHHHhhc---C---CC-cEEEecccc---------
Q 039837 109 MAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAP---------IYEKVKG---L---GL-PIIVLGEER--------- 163 (544)
Q Consensus 109 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~---------~~~~~~~---~---~~-~~~~~~~~~--------- 163 (544)
+++|++++|+++.++.+++.+++++++++++|+++. ..+.+.+ . .. .++.+....
T Consensus 138 ~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 217 (647)
T PTZ00237 138 ARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKK 217 (647)
T ss_pred HHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccccccccc
Confidence 999999999999999999999999999999999752 1111111 0 11 222221100
Q ss_pred ------cccccCHHHHHHhh-----h------hcCCCCCCCCCCCCCCCcCcceeeccHHH-HHHHHHhhccccCCcccC
Q 039837 164 ------IESAINWSELIEAA-----D------KAGNNFSNDDDVKQTDLWISKGVMLTHRN-LVANLCSTLFSVVPEMIG 225 (544)
Q Consensus 164 ------~~~~~~~~~~~~~~-----~------~~~~~~~~~~~~tsgttG~PKgV~~t~~~-l~~~~~~~~~~~~~~~~~ 225 (544)
......|+++.... . .........+.+||||||.||||+++|.+ +.+........+ ....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~--~~~~ 295 (647)
T PTZ00237 218 IETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSII--EKDI 295 (647)
T ss_pred ccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhc--CCCC
Confidence 01123345443311 0 01223344678999999999999999998 444333323333 5567
Q ss_pred ccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc--cC----HHHHHHHHHHcCceeeecchHHHHHHhcCCC-----C
Q 039837 226 QVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR--FE----LRAFLDALITHEVTFAPIVPPIILSLVKDPI-----V 294 (544)
Q Consensus 226 ~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~~----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-----~ 294 (544)
.+++++..|+.|+.+. ..++.++..|+++++.+. .. +..+++.++++++|++.++|+++..|++... .
T Consensus 296 ~d~~~~~~~~~w~~~~-~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~ 374 (647)
T PTZ00237 296 PTVVFSHSSIGWVSFH-GFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIR 374 (647)
T ss_pred CcEEEEcCCCceEeeH-HHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccc
Confidence 8899999999988665 467889999999998763 12 6789999999999999999999999987432 1
Q ss_pred CccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEE
Q 039837 295 DEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFI 374 (544)
Q Consensus 295 ~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~ 374 (544)
...+++++|. ++++|+++++++.+++.+.+ ++.+++.||+||++...+... .......+++|+|+++++++|+
T Consensus 375 ~~~~l~~Lr~--i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG~TE~~~~~~~~~----~~~~~~~~s~G~p~~g~~~~i~ 447 (647)
T PTZ00237 375 SKYDLSNLKE--IWCGGEVIEESIPEYIENKL-KIKSSRGYGQTEIGITYLYCY----GHINIPYNATGVPSIFIKPSIL 447 (647)
T ss_pred cccCcchheE--EEecCccCCHHHHHHHHHhc-CCCEEeeechHHhChhhhccC----CCCCCCCCCCccCcCCceEEEE
Confidence 3346777777 99999999999999999988 799999999999986554322 1122334789999999999999
Q ss_pred eCCCCCcCCCCCCceEEEecc---cccccccCChhhhhcccCC-CCeeecCceEEEcCCCcEEEEeecCCceeecceeeC
Q 039837 375 NPETGKSLPSNTPGELCVRSQ---CVMQGYYNNEEETARTIDK-NGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVA 450 (544)
Q Consensus 375 d~~~~~~~~~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~ 450 (544)
| ++|++++.|+.|||++++| +++.|||++++.+...|.. +|||+|||+|++|++|++++.||+||+||++|++|+
T Consensus 448 d-~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~ 526 (647)
T PTZ00237 448 S-EDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQ 526 (647)
T ss_pred C-CCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeC
Confidence 9 5899999999999999986 7899999999999877743 789999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCC---CCCH----HHHHHHHHhcccCCCceeEEEEeecCCC
Q 039837 451 PAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNA---KESE----DDIMDFVASNVATYKKVRVLHFVDGIPK 523 (544)
Q Consensus 451 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~---~~~~----~~l~~~l~~~l~~~~~p~~~~~~~~~P~ 523 (544)
|.+||++|.+||.|.+++|++++++..|+.++++|++.++. ..+. +++.++++++|+++++|..|+++++||+
T Consensus 527 p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~ 606 (647)
T PTZ00237 527 LNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPK 606 (647)
T ss_pred HHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCC
Confidence 99999999999999999999999998899999999987532 2233 4567788889999999999999999999
Q ss_pred CCCcccchHHHHHHHH
Q 039837 524 SHSGKIMRRILKDKML 539 (544)
Q Consensus 524 t~~GKi~r~~l~~~~~ 539 (544)
|.+||++|+.|++++.
T Consensus 607 T~sGKi~R~~Lr~~~~ 622 (647)
T PTZ00237 607 TKTGKIPRQIISKFLN 622 (647)
T ss_pred CCCccEeHHHHHHHHc
Confidence 9999999999999874
No 15
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1e-69 Score=571.47 Aligned_cols=500 Identities=21% Similarity=0.257 Sum_probs=408.2
Q ss_pred CCCCHH-HHHHhhhhhcCCceEEEEcc----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHH
Q 039837 34 ENVTLP-DFVLQDAELYADKVAFVEAV----SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGI 108 (544)
Q Consensus 34 ~~~~l~-~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~ 108 (544)
...|+. +.|+++++.+|+++|+++.. .++++||+||.+++.++|++|++.|+++||+|+++++|++++++++|||
T Consensus 49 ~~~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~ 128 (628)
T TIGR02316 49 GRTNLCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLAC 128 (628)
T ss_pred CEeeHHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 334554 56778888899999998631 2368999999999999999999999999999999999999999999999
Q ss_pred HHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchH---------HHhh----c---CCCcEEEeccccc------cc
Q 039837 109 MAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIY---------EKVK----G---LGLPIIVLGEERI------ES 166 (544)
Q Consensus 109 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~----~---~~~~~~~~~~~~~------~~ 166 (544)
+++|++++|+++.++.+++..++++++++++|+++... ..+. . ....++.++.... ..
T Consensus 129 ~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 208 (628)
T TIGR02316 129 ARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMRLIPGR 208 (628)
T ss_pred HHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCc
Confidence 99999999999999999999999999999999976421 1111 1 1123344432110 01
Q ss_pred ccCHHHHHHhhhh-------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHH-HHhhccccCCcccCccEEEEecchhHH
Q 039837 167 AINWSELIEAADK-------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVAN-LCSTLFSVVPEMIGQVTTLGLIPFFHI 238 (544)
Q Consensus 167 ~~~~~~~~~~~~~-------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~ 238 (544)
...+.++...... ........+.+||||||.||||+++|.++... .......+ ++.++|++++..|++|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~ 286 (628)
T TIGR02316 209 DVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIF--GIRAGQVMFSASDVGWV 286 (628)
T ss_pred cccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhc--CCCCCcEEEEcCCCCee
Confidence 2234443322111 11233456789999999999999999997543 33333444 67888999999999999
Q ss_pred HHHHHHHHhhHhccceEEEcCc----cCHHHHHHHHHHcCceeeecchHHHHHHhcCCC--CCccCccccccccEEEecC
Q 039837 239 YGITGICCATLRNKGKVVMMNR----FELRAFLDALITHEVTFAPIVPPIILSLVKDPI--VDEFDLSKLQLRAVMTAAA 312 (544)
Q Consensus 239 ~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~~v~~~G~ 312 (544)
.|+...++.++..|+++++.+. .++..+++.++++++|+++++|+++..|.+... ....+++++|. +++||+
T Consensus 287 ~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~--~~~gGe 364 (628)
T TIGR02316 287 VGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHW--LFLAGE 364 (628)
T ss_pred ehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeE--EEEecC
Confidence 9877788999999999999763 478899999999999999999999999887543 23456777777 999999
Q ss_pred CCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEE
Q 039837 313 PLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCV 392 (544)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v 392 (544)
++++++.+++.+.+ +..+++.||+||++..++...... .......+++|+|++|++++|+|+++|++++.|+.|||++
T Consensus 365 ~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~~~-~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v 442 (628)
T TIGR02316 365 PLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMPGL-DLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTV 442 (628)
T ss_pred CCCHHHHHHHHHHh-CCCEEecccccccCceeecCCCCC-CcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEE
Confidence 99999999999888 788999999999985443322110 1123456789999999999999966899999999999999
Q ss_pred ecc---cccccccCChhhhhccc---CCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccc
Q 039837 393 RSQ---CVMQGYYNNEEETARTI---DKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVED 466 (544)
Q Consensus 393 ~~~---~~~~gy~~~~~~~~~~~---~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~ 466 (544)
+|| +.+.|||++++.+...+ ..++||+|||+|++|+||+++++||.||+||++|++|+|.+||++|.+||+|.+
T Consensus 443 ~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~e 522 (628)
T TIGR02316 443 VPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSVAE 522 (628)
T ss_pred ecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcce
Confidence 998 56789999988776543 246799999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCCCCceeEEEEEeCCCCCC--------CHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHH
Q 039837 467 AAVVSLPDEEAGEIPAACVVMNPNAKE--------SEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 538 (544)
Q Consensus 467 ~~v~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~ 538 (544)
++|++++++..|+.+++++++.++... ..++|+++++++|+.+++|..++++++||+|.+||++|+.|++.+
T Consensus 523 a~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~ 602 (628)
T TIGR02316 523 VAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALA 602 (628)
T ss_pred EEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHH
Confidence 999999999889999999998765432 246799999999999999999999999999999999999999876
Q ss_pred H
Q 039837 539 L 539 (544)
Q Consensus 539 ~ 539 (544)
.
T Consensus 603 ~ 603 (628)
T TIGR02316 603 E 603 (628)
T ss_pred c
Confidence 4
No 16
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1e-68 Score=557.82 Aligned_cols=496 Identities=29% Similarity=0.471 Sum_probs=425.1
Q ss_pred CCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCccHHHHHHHHHHhc
Q 039837 34 ENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSL-GLRKGQVVIVVLPNVAEYGIVALGIMAAG 112 (544)
Q Consensus 34 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G 112 (544)
...|+.++|.++|+.+|+++|+.+. ++++||+||.+++.++|.+|.+. |+++||+|+++++|+++++++++||+++|
T Consensus 8 ~~~tl~~~l~~~a~~~~~~~a~~~~--~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G 85 (546)
T PRK08314 8 PETSLFHNLEVSARRYPDKTAIVFY--GRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRAN 85 (546)
T ss_pred CCCCHHHHHHHHHHHcCCCcceeec--CceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcC
Confidence 3568999999999999999999986 67999999999999999999999 99999999999999999999999999999
Q ss_pred CeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC----CCcEEEecc--cc-----------------------
Q 039837 113 GVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL----GLPIIVLGE--ER----------------------- 163 (544)
Q Consensus 113 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~--~~----------------------- 163 (544)
++++|+++..+.+++.++++.+++++++++.+....+... ....+.+.. ..
T Consensus 86 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (546)
T PRK08314 86 AVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALA 165 (546)
T ss_pred cEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCccccccccccccccc
Confidence 9999999999999999999999999999988766655432 122121110 00
Q ss_pred cccccCHHHHHHhhh-----hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHH
Q 039837 164 IESAINWSELIEAAD-----KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHI 238 (544)
Q Consensus 164 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 238 (544)
......+++...... .........+.+||||||.||+|.+||++++.++......+ +....+++++.+|++|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~l~~~p~~~~ 243 (546)
T PRK08314 166 PGGVVAWKEALAAGLAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS--NSTPESVVLAVLPLFHV 243 (546)
T ss_pred ccccccHHHHhcccCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh--CCCCCceEEEEcCchHH
Confidence 001123333322210 01112334568899999999999999999999888776666 67889999999999999
Q ss_pred HHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhH
Q 039837 239 YGITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDL 318 (544)
Q Consensus 239 ~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~ 318 (544)
+|+...++.++..|+++++.+.+++..+.+.++++++|++.++|+++..+++.......++++++. +++||+++++++
T Consensus 244 ~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~--~~~gG~~~~~~~ 321 (546)
T PRK08314 244 TGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRY--IGGGGAAMPEAV 321 (546)
T ss_pred HHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhhe--eeeccccCCHHH
Confidence 998888899999999999999889999999999999999999999999998765545556667666 999999999999
Q ss_pred HHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEeccccc
Q 039837 319 LSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVM 398 (544)
Q Consensus 319 ~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~ 398 (544)
.+++.+.| +.++++.||+||++....... .......++|.|+++++++++|++++..++.|+.|||+++|++++
T Consensus 322 ~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~-----~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~ 395 (546)
T PRK08314 322 AERLKELT-GLDYVEGYGLTETMAQTHSNP-----PDRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVF 395 (546)
T ss_pred HHHHHHHc-CCcEEecccccccccceecCC-----CcCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchh
Confidence 99999988 789999999999987654432 122345789999999999999987899999999999999999999
Q ss_pred ccccCChhhhhcccC---CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCC
Q 039837 399 QGYYNNEEETARTID---KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDE 475 (544)
Q Consensus 399 ~gy~~~~~~~~~~~~---~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~ 475 (544)
.||+++++.+...|. +.+||+|||+|+++++|.+++.||.||+|+++|.+|+|.+||++|.++|+|.+++|++.++.
T Consensus 396 ~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~ 475 (546)
T PRK08314 396 KGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKHPAIQEACVIATPDP 475 (546)
T ss_pred ccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhCcchheEEEEeCCCc
Confidence 999999998887762 34699999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceeEEEEEeCCCC--CCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 476 EAGEIPAACVVMNPNA--KESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 476 ~~~~~~~~~v~~~~~~--~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
..++.+++++++.++. ..+.+++.++++++|+++++|..++++++||+|.+||++|++|++..+..
T Consensus 476 ~~~~~~~a~v~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~~~~~ 543 (546)
T PRK08314 476 RRGETVKAVVVLRPEARGKTTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQEQEKAR 543 (546)
T ss_pred ccCceeEEEEEECCCCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHhhh
Confidence 8889999999987754 34568999999999999999999999999999999999999999876653
No 17
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.8e-69 Score=571.42 Aligned_cols=497 Identities=24% Similarity=0.310 Sum_probs=400.1
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEc---cC----CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHH
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEA---VS----GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVA 105 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~---~~----~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~ 105 (544)
+...|+.++|+++|+++|+++|+... .+ .+.+||+||.++++++|++|++.|+++||+|+++++|+++|++++
T Consensus 41 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 120 (651)
T PLN02736 41 PEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVD 120 (651)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHH
Confidence 34468999999999999999998431 11 146999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC-----CCcEEE-ecccc----------cccccC
Q 039837 106 LGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL-----GLPIIV-LGEER----------IESAIN 169 (544)
Q Consensus 106 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~~~-~~~~~----------~~~~~~ 169 (544)
+||+++|++++|+++.++.+++.+++++++++++|++.+....+... .++.+. .+... ......
T Consensus 121 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~ 200 (651)
T PLN02736 121 HACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVT 200 (651)
T ss_pred HHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEE
Confidence 99999999999999999999999999999999999988766554331 123322 22110 011234
Q ss_pred HHHHHHhhhh-------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHH
Q 039837 170 WSELIEAADK-------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGIT 242 (544)
Q Consensus 170 ~~~~~~~~~~-------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 242 (544)
++++...... ........+.+||||||.||||++||+++..++......+ ++.+.+++++.+|++|.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~--~~~~~d~~l~~lPl~h~~~~~ 278 (651)
T PLN02736 201 YSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLST--KFYPSDVHISYLPLAHIYERV 278 (651)
T ss_pred HHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhcc--CCCCCCEEEEeCCHHHHHHHH
Confidence 5554432211 1122334567999999999999999999999888877666 678899999999999999985
Q ss_pred HHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCC-----------------------------
Q 039837 243 GICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPI----------------------------- 293 (544)
Q Consensus 243 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----------------------------- 293 (544)
.++.++..|+++++.+. ++..+++.++++++|+++++|+++..+.+...
T Consensus 279 -~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (651)
T PLN02736 279 -NQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGK 356 (651)
T ss_pred -HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCC
Confidence 56778999999988764 78899999999999999999999988764310
Q ss_pred CCcc------------Cc-cccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCC
Q 039837 294 VDEF------------DL-SKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKN 360 (544)
Q Consensus 294 ~~~~------------~~-~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~ 360 (544)
.... .+ +++|. +++||+++++++.+++.+.+ ++.+++.||+||++..++... . .....+
T Consensus 357 ~~~~~~~~~~~~~~~~~lg~~lr~--~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~----~-~~~~~~ 428 (651)
T PLN02736 357 NPSPMWDRLVFNKIKAKLGGRVRF--MSSGASPLSPDVMEFLRICF-GGRVLEGYGMTETSCVISGMD----E-GDNLSG 428 (651)
T ss_pred CCCchHHHHHHHHHHHHhcCcEEE--EEeCCCCCCHHHHHHHHHHh-CCCeEEEechHHhchheeccC----C-CCCCCC
Confidence 0000 01 24555 99999999999999999888 789999999999986655432 1 234568
Q ss_pred cccccCCCceEEEEeCCCCC---cCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEee
Q 039837 361 SVGFILPNLEVKFINPETGK---SLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDR 437 (544)
Q Consensus 361 ~~G~~~~~~~~~i~d~~~~~---~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR 437 (544)
++|+|+|+++++|+|.+++. ...++..|||+++||+++.|||++|+.|.+.|+.+|||+|||+|++|+||++++.||
T Consensus 429 ~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR 508 (651)
T PLN02736 429 HVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDR 508 (651)
T ss_pred ccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEe
Confidence 89999999999999843332 223345799999999999999999999999998899999999999999999999999
Q ss_pred cCCceee-cceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCC--------CCCCHHHHHHHHH-----
Q 039837 438 IKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPN--------AKESEDDIMDFVA----- 503 (544)
Q Consensus 438 ~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--------~~~~~~~l~~~l~----- 503 (544)
.+|+||+ +|++|+|.+||++|.+||.|.+++|++. ..++.++|++++.++ ...+..++.++++
T Consensus 509 ~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (651)
T PLN02736 509 KKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVR 585 (651)
T ss_pred chhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHH
Confidence 9999997 7999999999999999999999999983 346789999998653 1122222222222
Q ss_pred -------------hcccCCCceeEEEEeecCC------CCCCcccchHHHHHHHHHhhhC
Q 039837 504 -------------SNVATYKKVRVLHFVDGIP------KSHSGKIMRRILKDKMLEKMRK 544 (544)
Q Consensus 504 -------------~~l~~~~~p~~~~~~~~~P------~t~~GKi~r~~l~~~~~~~~~~ 544 (544)
+.|+.+++|..|+++++.| +|++||++|+++++.|.++|++
T Consensus 586 ~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i~~ 645 (651)
T PLN02736 586 AAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAISD 645 (651)
T ss_pred HHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHHHH
Confidence 2599999999999998876 7999999999999999998863
No 18
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.5e-69 Score=558.79 Aligned_cols=497 Identities=29% Similarity=0.485 Sum_probs=417.2
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRS-LGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
..|+.+.|++.++.+|+++|+++. ++++||+||.++++++|++|.+ .|+++||+|+++++|++++++++|||+++|+
T Consensus 23 ~~~~~~~l~~~a~~~p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga 100 (562)
T PRK05677 23 YPNIQAVLKQSCQRFADKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGL 100 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 358999999999999999999976 6899999999999999999997 5999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhc----CCCcEEEeccc-c-------------------------
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKG----LGLPIIVLGEE-R------------------------- 163 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~~~~~~~~-~------------------------- 163 (544)
+++|+++.++.+++.++++.++++++|++.+....+.+ .+.+.+.+.+. .
T Consensus 101 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (562)
T PRK05677 101 IVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYH 180 (562)
T ss_pred EEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccccccC
Confidence 99999999999999999999999999998765443322 12222222110 0
Q ss_pred cccccCHHHHHHhhhh-------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCccc-CccEEEEecch
Q 039837 164 IESAINWSELIEAADK-------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMI-GQVTTLGLIPF 235 (544)
Q Consensus 164 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~ 235 (544)
......+.+....... ........+.+||||||.||||+++|+++...+......+..... ..+.+++.+|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~pl 260 (562)
T PRK05677 181 LPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPLPL 260 (562)
T ss_pred CcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcCcH
Confidence 0001112222211100 011223356789999999999999999998876554433321233 34688999999
Q ss_pred hHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCC
Q 039837 236 FHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPL 314 (544)
Q Consensus 236 ~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~ 314 (544)
+|.+++...++.++..|.+.++.+ ..++..+++.++++++|++.++|+++..|++........++++|. +++||+++
T Consensus 261 ~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~--v~~gG~~~ 338 (562)
T PRK05677 261 YHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKL--TLSGGMAL 338 (562)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceE--EEEcCccC
Confidence 999998777788888888776654 568899999999999999999999999998765544445667667 99999999
Q ss_pred CHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEec
Q 039837 315 APDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRS 394 (544)
Q Consensus 315 ~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~ 394 (544)
++++.++|.+.+ ++++++.||+||++.++..... .....+++|.|++++.++++| +++..++.|+.|||+++|
T Consensus 339 ~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~-----~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g 411 (562)
T PRK05677 339 QLATAERWKEVT-GCAICEGYGMTETSPVVSVNPS-----QAIQVGTIGIPVPSTLCKVID-DDGNELPLGEVGELCVKG 411 (562)
T ss_pred CHHHHHHHHHHc-CCCeeccCCccccCcceeecCc-----cCCCCCccCccCCCCEEEEEC-CCCCCCCCCCCeEEEEec
Confidence 999999999987 8999999999999876654321 233457899999999999999 578899999999999999
Q ss_pred ccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecC
Q 039837 395 QCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPD 474 (544)
Q Consensus 395 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 474 (544)
+.++.||+++++.+...|..++||+|||+|+++++|.+++.||.+|+|+++|.+|+|.+||+.|+++++|.+++|+++++
T Consensus 412 ~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~ 491 (562)
T PRK05677 412 PQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCAAIGVPD 491 (562)
T ss_pred CccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccEEEEEeccC
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhh
Q 039837 475 EEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 542 (544)
Q Consensus 475 ~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~ 542 (544)
...++.+++++++.++...+.+++.++++++|+++++|..++++++||+|++||++|++|++++.++.
T Consensus 492 ~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~~~~~ 559 (562)
T PRK05677 492 EKSGEAIKVFVVVKPGETLTKEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRDEELKKA 559 (562)
T ss_pred ccCCceEEEEEEeCCCCCCCHHHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHHHHHHhc
Confidence 88888999999887776778899999999999999999999999999999999999999999887765
No 19
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=2.1e-68 Score=554.34 Aligned_cols=492 Identities=26% Similarity=0.360 Sum_probs=419.4
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccC----CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHH
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVS----GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMA 110 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~ 110 (544)
..|+.+.|.+.++.+|+++|+++... .+.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||++
T Consensus 23 ~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~ 102 (547)
T PRK13295 23 DRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSR 102 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 45899999999999999999987521 17899999999999999999999999999999999999999999999999
Q ss_pred hcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchH-----HHhhc----C-CCc-EEEecccccccccCHHHHHHhh--
Q 039837 111 AGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIY-----EKVKG----L-GLP-IIVLGEERIESAINWSELIEAA-- 177 (544)
Q Consensus 111 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~----~-~~~-~~~~~~~~~~~~~~~~~~~~~~-- 177 (544)
+|++++|+++.++.+++.++++.++++++++++... +.+.. . .+. ++.++.. ....+..+....
T Consensus 103 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 179 (547)
T PRK13295 103 IGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGD---GADSFEALLITPAW 179 (547)
T ss_pred cCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCC---CccCHHHHhhCCcc
Confidence 999999999999999999999999999999987531 11111 1 112 2222211 112233322110
Q ss_pred ------------hhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHH
Q 039837 178 ------------DKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGIC 245 (544)
Q Consensus 178 ------------~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~ 245 (544)
............+||||||.||+|++||+++...+......+ ++..+++++..+|++|..++...+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~~~~l~~~p~~h~~g~~~~~ 257 (547)
T PRK13295 180 EQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERL--GLGADDVILMASPMAHQTGFMYGL 257 (547)
T ss_pred ccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHh--CCCCCCeEEEecCchhhhhHHHHH
Confidence 001112334567899999999999999999998887776666 678899999999999999988888
Q ss_pred HhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhh
Q 039837 246 CATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKK 325 (544)
Q Consensus 246 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~ 325 (544)
+.++..|+++++.+..++..+++.++++++|++.++|+++..|..........+++++. +++||+++++++.+++.+.
T Consensus 258 ~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~--~~~~G~~l~~~~~~~~~~~ 335 (547)
T PRK13295 258 MMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRT--FLCAGAPIPGALVERARAA 335 (547)
T ss_pred HHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceE--EEEecCCCCHHHHHHHHHH
Confidence 99999999999998889999999999999999999999999998876555566777777 9999999999999999999
Q ss_pred cCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCCh
Q 039837 326 FPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNE 405 (544)
Q Consensus 326 ~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~ 405 (544)
+ ++++++.||+||++.+.+.... ........++|+|+++++++|+| +++.+++.|+.|||+++|+.++.||++++
T Consensus 336 ~-~~~~~~~YG~TE~~~~~~~~~~---~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~ 410 (547)
T PRK13295 336 L-GAKIVSAWGMTENGAVTLTKLD---DPDERASTTDGCPLPGVEVRVVD-ADGAPLPAGQIGRLQVRGCSNFGGYLKRP 410 (547)
T ss_pred h-CCCeEEeccCCCCCCeeeccCC---CcchhccCccccccCCcEEEEEC-CCCCCCCCCCCCeEEEEcCcccccccCCc
Confidence 8 8999999999999876544321 11123346789999999999999 57889999999999999999999999999
Q ss_pred hhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEE
Q 039837 406 EETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACV 485 (544)
Q Consensus 406 ~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 485 (544)
+.+... .+|||+|||+|+++++|++++.||.+|+++++|.+++|.+||++|+++++|.+++|++++++..++.+++++
T Consensus 411 ~~t~~~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v 488 (547)
T PRK13295 411 QLNGTD--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGERACAFV 488 (547)
T ss_pred cccccC--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEEE
Confidence 888765 578999999999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EeCCCCCCCHHHHHHHHHh-cccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 486 VMNPNAKESEDDIMDFVAS-NVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 486 ~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
++.++...+.+++.+++++ .++++++|..++++++||+|.+||++|++|++++.+
T Consensus 489 ~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 489 VPRPGQSLDFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLREMLRG 544 (547)
T ss_pred EeCCCCCCCHHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHHHHHHHHhc
Confidence 9887766777899999986 799999999999999999999999999999998864
No 20
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.9e-68 Score=562.85 Aligned_cols=498 Identities=24% Similarity=0.329 Sum_probs=409.2
Q ss_pred CCH-HHHHHhhhhhcCCceEEEEccC----CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHH
Q 039837 36 VTL-PDFVLQDAELYADKVAFVEAVS----GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMA 110 (544)
Q Consensus 36 ~~l-~~~l~~~a~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~ 110 (544)
.|+ ...|+++++.+|+++|+++..+ .+++||+||.+++.++|++|++.|+++||+|+++++|++++++++|||++
T Consensus 56 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 135 (625)
T TIGR02188 56 LNVSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACAR 135 (625)
T ss_pred EEHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 344 4456678888999999986422 35899999999999999999999999999999999999999999999999
Q ss_pred hcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHH---------Hh----hcC--CCc-EEEeccccc------cccc
Q 039837 111 AGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYE---------KV----KGL--GLP-IIVLGEERI------ESAI 168 (544)
Q Consensus 111 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~----~~~--~~~-~~~~~~~~~------~~~~ 168 (544)
+|++++|+++.++.+++.+++++++++++|+++.... .+ ... .++ +++++.... ....
T Consensus 136 ~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (625)
T TIGR02188 136 IGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPWVEGRDV 215 (625)
T ss_pred hCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcCccccccc
Confidence 9999999999999999999999999999999865321 11 111 122 223221110 0112
Q ss_pred CHHHHHHhhhh------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHh-hccccCCcccCccEEEEecchhHHHHH
Q 039837 169 NWSELIEAADK------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCS-TLFSVVPEMIGQVTTLGLIPFFHIYGI 241 (544)
Q Consensus 169 ~~~~~~~~~~~------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~g~ 241 (544)
.+.++...... ........+.+||||||.||||+++|++++..... ....+ ++..++++++..|++|..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~g~ 293 (625)
T TIGR02188 216 WWHDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVF--DIKDGDIFWCTADVGWITGH 293 (625)
T ss_pred cHHHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhcc--CCCCCcEEEECCCchhhhcc
Confidence 34443322111 11223446789999999999999999998654433 33333 67788999999999999987
Q ss_pred HHHHHhhHhccceEEEcCc----cCHHHHHHHHHHcCceeeecchHHHHHHhcCCCC--CccCccccccccEEEecCCCC
Q 039837 242 TGICCATLRNKGKVVMMNR----FELRAFLDALITHEVTFAPIVPPIILSLVKDPIV--DEFDLSKLQLRAVMTAAAPLA 315 (544)
Q Consensus 242 ~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~v~~~G~~~~ 315 (544)
...++.++..|+++++.+. .++..+++.++++++|++.++|+++..|.+.... ...++++++. ++++|++++
T Consensus 294 ~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~--i~~~G~~l~ 371 (625)
T TIGR02188 294 SYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRL--LGSVGEPIN 371 (625)
T ss_pred HHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeE--EEEecCCCC
Confidence 7778999999999998753 3789999999999999999999999999876532 2345677777 999999999
Q ss_pred HhHHHHHHhhcC--CCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCC-CCCCceEEE
Q 039837 316 PDLLSSFEKKFP--GVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLP-SNTPGELCV 392 (544)
Q Consensus 316 ~~~~~~~~~~~~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~-~g~~Gel~v 392 (544)
+++++++.+.++ ++++++.||+||++..++..... ......+++|+|++|++++|+| ++|++++ .|+.|||++
T Consensus 372 ~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~---~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g~~GeL~v 447 (625)
T TIGR02188 372 PEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPG---ATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPGEGGYLVI 447 (625)
T ss_pred HHHHHHHHHHcCCCCCceEecccccccCCceeecCCC---CCCcCCCcccCCcCCceEEEEC-CCCCCCCCCCCeEEEEE
Confidence 999999999884 37899999999998765433211 1234567899999999999999 7899998 999999999
Q ss_pred ec--ccccccccCChhhhhcccC--CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceE
Q 039837 393 RS--QCVMQGYYNNEEETARTID--KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAA 468 (544)
Q Consensus 393 ~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 468 (544)
+| |+++.|||++++.+...+. .+|||+|||+|++|++|++++.||+||+||++|++|+|.+||++|.++|+|.+++
T Consensus 448 ~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~ 527 (625)
T TIGR02188 448 KQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAA 527 (625)
T ss_pred ccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEE
Confidence 99 6899999999987776553 3789999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCceeEEEEEeCCCCCCCH---HHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 469 VVSLPDEEAGEIPAACVVMNPNAKESE---DDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 469 v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
|++++++..|+.+++++++.++...+. ++++++++++|+.+++|..|+++++||+|.+||++|+.|++++..+
T Consensus 528 vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 603 (625)
T TIGR02188 528 VVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGE 603 (625)
T ss_pred EEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 999999988999999999987765443 6899999999999999999999999999999999999999987543
No 21
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.3e-68 Score=556.36 Aligned_cols=500 Identities=32% Similarity=0.485 Sum_probs=425.2
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
.+|+.+.|.++++++|+++|+.+. ++.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 31 ~~~l~~~~~~~~~~~p~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 108 (573)
T PRK05605 31 DTTLVDLYDNAVARFGDRPALDFF--GATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAV 108 (573)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcE
Confidence 458999999999999999999986 688999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC----CCcEE-Eeccc---------------------------
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL----GLPII-VLGEE--------------------------- 162 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~-~~~~~--------------------------- 162 (544)
++|+++.++.+++.+++++++++++|+++.....+... ....+ .++..
T Consensus 109 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
T PRK05605 109 VVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALTG 188 (573)
T ss_pred EeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999987765544321 11111 11100
Q ss_pred ccccccCHHHHHHhhhh----------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEe
Q 039837 163 RIESAINWSELIEAADK----------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGL 232 (544)
Q Consensus 163 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 232 (544)
.......|+++...... ..........+||||||.||+|.+||+++...+......+..-....++++..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 268 (573)
T PRK05605 189 PAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVLAA 268 (573)
T ss_pred CCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEEEe
Confidence 00112234443322110 11223345679999999999999999999887764433221012346899999
Q ss_pred cchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecC
Q 039837 233 IPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAA 312 (544)
Q Consensus 233 ~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~ 312 (544)
+|++|.+|+...++.++..|+++++.+..++..+++.++++++|++.++|+++..|++........+++++. +++||+
T Consensus 269 ~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~--i~~gg~ 346 (573)
T PRK05605 269 LPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRN--AFSGAM 346 (573)
T ss_pred cChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccE--EEECCC
Confidence 999999998777888899999999988889999999999999999999999999999877666666777777 999999
Q ss_pred CCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCC-CCcCCCCCCceEE
Q 039837 313 PLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPET-GKSLPSNTPGELC 391 (544)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~-~~~~~~g~~Gel~ 391 (544)
++++++.++|.+.+ ++.+++.||+||++.++..... ......+++|.|++++.++|+|+++ +.+++.|+.|||+
T Consensus 347 ~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~ 421 (573)
T PRK05605 347 ALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNPM----SDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELL 421 (573)
T ss_pred cCCHHHHHHHHHHh-CCCeecccccchhchhhhcCCc----ccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEE
Confidence 99999999999887 7899999999999876655431 1233457899999999999999665 6889999999999
Q ss_pred EecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEe
Q 039837 392 VRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVS 471 (544)
Q Consensus 392 v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 471 (544)
++|+.++.||++++..+...| .+|||+|||+|+++++|++++.||.+|+++.+|++|+|.+||+++.+++.|.+++|++
T Consensus 422 v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i~~~~v~~ 500 (573)
T PRK05605 422 VRGPQVFKGYWNRPEETAKSF-LDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREHPGVEDAAVVG 500 (573)
T ss_pred EecCchhhhhcCChhHhhhcc-cCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhCcccceEEEEe
Confidence 999999999999999998888 5679999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhhhC
Q 039837 472 LPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKMRK 544 (544)
Q Consensus 472 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~~~ 544 (544)
.++...++.+++++++.++...+.+++.++++++|+.+++|..++++++||+|.+||++|++|++++.+++++
T Consensus 501 ~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L~~~~~~~~~~ 573 (573)
T PRK05605 501 LPREDGSEEVVAAVVLEPGAALDPEGLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRRREVREELLEKLGA 573 (573)
T ss_pred eecccCCeEEEEEEEECCCCCCCHHHHHHHHHHhCccccCCcEEEEeccCCCCCcccccHHHHHHHHHHHhcC
Confidence 9988888899999998877677889999999999999999999999999999999999999999999888753
No 22
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=6.8e-68 Score=553.21 Aligned_cols=509 Identities=30% Similarity=0.482 Sum_probs=431.5
Q ss_pred CCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHH
Q 039837 28 PAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALG 107 (544)
Q Consensus 28 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA 107 (544)
+..+...+.|+.++|.+.++++|+++|+++...++.+||+||.++++++|.+|.+.|+++||+|+++++|++++++++||
T Consensus 8 ~~~~~~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la 87 (559)
T PRK08315 8 PTDVPLLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFA 87 (559)
T ss_pred CCcCChhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHH
Confidence 34445556799999999999999999998865567899999999999999999999999999999999999999999999
Q ss_pred HHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHH-----Hhhc----C--------------C-CcEEEecccc
Q 039837 108 IMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYE-----KVKG----L--------------G-LPIIVLGEER 163 (544)
Q Consensus 108 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~----~--------------~-~~~~~~~~~~ 163 (544)
|+++|++++|+++..+.+++..+++.+++++++++..... .+.+ . . ...+..+...
T Consensus 88 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (559)
T PRK08315 88 TAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK 167 (559)
T ss_pred HHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccC
Confidence 9999999999999999999999999999999999865321 1110 0 0 0122222211
Q ss_pred cccccCHHHHHHhh------------hhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEE
Q 039837 164 IESAINWSELIEAA------------DKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLG 231 (544)
Q Consensus 164 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 231 (544)
......+.++.... ............+||||||.||+|.+||+++..++......+ ++..+++++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~~~ 245 (559)
T PRK08315 168 HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAM--KLTEEDRLCI 245 (559)
T ss_pred CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhc--CCCCCceEEE
Confidence 22223344432211 011122234578899999999999999999998888777766 7788999999
Q ss_pred ecchhHHHHHHHHHHhhHhccceEEE-cCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEe
Q 039837 232 LIPFFHIYGITGICCATLRNKGKVVM-MNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTA 310 (544)
Q Consensus 232 ~~p~~~~~g~~~~~~~~l~~G~~~~~-~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~ 310 (544)
.+|++|.+|+...++.++..|+++++ ...+++..+++.++++++|++.++|+++..++.........+++++. ++++
T Consensus 246 ~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~--~~~~ 323 (559)
T PRK08315 246 PVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRT--GIMA 323 (559)
T ss_pred ecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhhe--eEec
Confidence 99999999988888999999999984 45678999999999999999999999999988776555556777666 9999
Q ss_pred cCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceE
Q 039837 311 AAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGEL 390 (544)
Q Consensus 311 G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel 390 (544)
|++++.++++.+.+.++..++++.||+||++.+++...... .......++|+|++++.++++|++++++++.|+.|||
T Consensus 324 G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~--~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl 401 (559)
T PRK08315 324 GSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDD--PLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGEL 401 (559)
T ss_pred CCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCccc--chhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEE
Confidence 99999999999999996667999999999987655433111 1223567899999999999999766999999999999
Q ss_pred EEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEE
Q 039837 391 CVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVV 470 (544)
Q Consensus 391 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 470 (544)
+|+|+.++.||++++..+...+..++||+|||+++++++|.++++||.+|+++++|.++++.+||++|.++++|.+++|+
T Consensus 402 ~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~ 481 (559)
T PRK08315 402 CTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYTHPKIQDVQVV 481 (559)
T ss_pred EEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHhCCCceEEEEE
Confidence 99999999999999999988887889999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhh
Q 039837 471 SLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 542 (544)
Q Consensus 471 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~ 542 (544)
+.+++..++.+++++++.++...+.+++.++++++++.+++|..+++++++|+|.+||++|.+|++++.+.+
T Consensus 482 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r~~L~~~~~~~~ 553 (559)
T PRK08315 482 GVPDEKYGEEVCAWIILRPGATLTEEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQKFKMREMMIEEL 553 (559)
T ss_pred ecCCCCCCeEEEEEEEeCCCCCCCHHHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeHHHHHHHHHhhh
Confidence 999887788889999888776678889999999999999999999999999999999999999999886654
No 23
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-68 Score=547.52 Aligned_cols=476 Identities=23% Similarity=0.331 Sum_probs=409.5
Q ss_pred CCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCee
Q 039837 36 VTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF 115 (544)
Q Consensus 36 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 115 (544)
|++.+.|.++|+++|+++|+.+. +.++||.||.++++++|++|.+.|. +||+|+++++|+.+++++++||+++|+++
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 77 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEN--DRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTC 77 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecC--CcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEE
Confidence 57889999999999999999986 6899999999999999999999884 89999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHHhhh------hcCCCCCCCCC
Q 039837 116 SGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAAD------KAGNNFSNDDD 189 (544)
Q Consensus 116 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 189 (544)
+|+++.++.+++.++++.+++++++++......+......++..+. +........ .........+.
T Consensus 78 v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~i~ 149 (487)
T PRK07638 78 VPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEEGRVIEIDE--------WKRMIEKYLPTYAPIENVQNAPFYMG 149 (487)
T ss_pred EecCccCCHHHHHHHHHhCCCCEEEEecccccchhhccceEEEehh--------hhhhhhhccccccccccCCCCcEEEE
Confidence 9999999999999999999999999988665544433333333221 111111000 01112224678
Q ss_pred CCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHH
Q 039837 190 VKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDA 269 (544)
Q Consensus 190 ~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~ 269 (544)
+||||||.||||+++|+++...+......+ ++..+|+++...|++|..++ ..++.++..|+++++.+.+++..+++.
T Consensus 150 ~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~--~~~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~~~~~~~~~~~~~~~ 226 (487)
T PRK07638 150 FTSGSTGKPKAFLRAQQSWLHSFDCNVHDF--HMKREDSVLIAGTLVHSLFL-YGAISTLYVGQTVHLMRKFIPNQVLDK 226 (487)
T ss_pred eCCCCCCCCcEEEEecHHHHHHHHHHHHhc--CcCCCCEEEEeecchHHHHH-HHHHHHHccCcEEEEcCCCCHHHHHHH
Confidence 999999999999999999998887777666 67889999999999998876 677889999999999998999999999
Q ss_pred HHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCC
Q 039837 270 LITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGD 349 (544)
Q Consensus 270 i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 349 (544)
++++++|++.++|+++..|.+... . ..+... ++++|+.++.++.+++.+.+|++++++.||+||++.++....
T Consensus 227 i~~~~~t~~~~~P~~~~~l~~~~~---~-~~~~~~--~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~- 299 (487)
T PRK07638 227 LETENISVMYTVPTMLESLYKENR---V-IENKMK--IISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVD- 299 (487)
T ss_pred HHHcCCeEEEeCcHHHHHHHhCcC---c-CCceeE--EEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecc-
Confidence 999999999999999999987632 1 222223 788999999999999999998999999999999997655432
Q ss_pred CCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCC
Q 039837 350 PANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDD 429 (544)
Q Consensus 350 ~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~ 429 (544)
........++|+|++++.++|+| ++|.+++.|+.|||+++|+.++.||+++++.+...+ .+|||+|||+++++++
T Consensus 300 ---~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~d~~ 374 (487)
T PRK07638 300 ---EESERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELN-ADGWMTVRDVGYEDEE 374 (487)
T ss_pred ---cccCCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceeeecCCHHHHhhhc-cCCcEecCccEeEcCC
Confidence 11334567899999999999999 678999999999999999999999999998876654 6899999999999999
Q ss_pred CcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCC
Q 039837 430 GDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATY 509 (544)
Q Consensus 430 g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~ 509 (544)
|++++.||.+|+||++|.+|+|.+||+++.++|+|.+++|++.+++..|+.++++++. ..+.+++.+++++.++.+
T Consensus 375 g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~----~~~~~~l~~~~~~~l~~~ 450 (487)
T PRK07638 375 GFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKG----SATKQQLKSFCLQRLSSF 450 (487)
T ss_pred CeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEEC----CCCHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999988888888888763 357789999999999999
Q ss_pred CceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 510 KKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 510 ~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
++|..++++++||+|++||++|++|+++++++
T Consensus 451 ~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 482 (487)
T PRK07638 451 KIPKEWHFVDEIPYTNSGKIARMEAKSWIENQ 482 (487)
T ss_pred cCCcEEEEecccCCCCcccccHHHHHHHHhcc
Confidence 99999999999999999999999999988654
No 24
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.2e-68 Score=551.03 Aligned_cols=483 Identities=22% Similarity=0.337 Sum_probs=408.7
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
..++.+.|.++++++|+++|+++. ++.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 119 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDE--LGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGAD 119 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeC--CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcE
Confidence 358999999999999999999985 679999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC----C--CcEEEecccccccccCHHHHHHhhhh----cCCCC
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL----G--LPIIVLGEERIESAINWSELIEAADK----AGNNF 184 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 184 (544)
++|+++.++.+++.++++.++++++|++.+....+... . ...+.+.+.. ....++.+...... .....
T Consensus 120 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 197 (537)
T PRK13382 120 ILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDED--HDLTVEVLIAAHAGQRPEPTGRK 197 (537)
T ss_pred EEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCc--ccccHHHHhhccCcCCCCCCCCC
Confidence 99999999999999999999999999987765544321 0 1112221111 11223333221110 11223
Q ss_pred CCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHH
Q 039837 185 SNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELR 264 (544)
Q Consensus 185 ~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~ 264 (544)
.....+||||||.||||+++|+++..........+ ....+++++...|++|.+|+ ..++.++..|+++++...+++.
T Consensus 198 ~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~g~~~~~~~~~~~~ 274 (537)
T PRK13382 198 GRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRT--PWRAEEPTVIVAPMFHAWGF-SQLVLAASLACTIVTRRRFDPE 274 (537)
T ss_pred CeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhh--CCCCCCeEEEecChHhhhHH-HHHHHHHhcCcEEEECCCcCHH
Confidence 34567899999999999999998888777666555 56778899999999999998 6778889999999998889999
Q ss_pred HHHHHHHHcCceeeecchHHHHHHhcCCCC--CccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccc
Q 039837 265 AFLDALITHEVTFAPIVPPIILSLVKDPIV--DEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSC 342 (544)
Q Consensus 265 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~ 342 (544)
.+++.++++++|++.++|+++..|++.... ...+.++++. +++||+++++++++.|.+.+ +..+++.||+||++.
T Consensus 275 ~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~--i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~ 351 (537)
T PRK13382 275 ATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRF--AAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEAGM 351 (537)
T ss_pred HHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeE--EEEcCCCCCHHHHHHHHHHc-CCcEEecccccccCc
Confidence 999999999999999999999999875432 2234456666 99999999999999999999 678999999999987
Q ss_pred cccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCc
Q 039837 343 ITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGD 422 (544)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD 422 (544)
++.... .......+++|+|++++.++|+| +++++++.|+.|||+++|++++.||+ ++.+.. + .+|||+|||
T Consensus 352 ~~~~~~----~~~~~~~~~vG~p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~gY~--~~~~~~-~-~~g~~~TGD 422 (537)
T PRK13382 352 IATATP----ADLRAAPDTAGRPAEGTEIRILD-QDFREVPTGEVGTIFVRNDTQFDGYT--SGSTKD-F-HDGFMASGD 422 (537)
T ss_pred ceecCh----hHhccCCCCccccCcCcEEEEEC-CCCCCCCCCCeeEEEEEcCCcccCcc--ccchhh-c-cCCCEeeCc
Confidence 655332 11234567899999999999999 57899999999999999999999998 444443 3 478999999
Q ss_pred eEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHH
Q 039837 423 IGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFV 502 (544)
Q Consensus 423 ~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l 502 (544)
+++++++|++++.||.+|+||++|++|++.+||+.|+++|+|.+++|++.+++..++.+++++++.++...+.+++++++
T Consensus 423 l~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~~l 502 (537)
T PRK13382 423 VGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGASATPETLKQHV 502 (537)
T ss_pred eEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988888899999998877667789999999
Q ss_pred HhcccCCCceeEEEEeecCCCCCCcccchHHHHH
Q 039837 503 ASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKD 536 (544)
Q Consensus 503 ~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~ 536 (544)
+++|+.+++|..+++++++|+|++||++|++|++
T Consensus 503 ~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 503 RDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred HHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 9999999999999999999999999999999864
No 25
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-68 Score=552.70 Aligned_cols=505 Identities=23% Similarity=0.351 Sum_probs=417.2
Q ss_pred CCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHH
Q 039837 28 PAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALG 107 (544)
Q Consensus 28 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA 107 (544)
.+.+.+...|+.+.|.++|+++|+++|+++..+.+.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++|
T Consensus 8 ~~~~~~~~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 87 (534)
T PRK05852 8 APMASDFGPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLA 87 (534)
T ss_pred cchhhhhcccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHH
Confidence 34455666789999999999999999998764456899999999999999999999999999999999999999999999
Q ss_pred HHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC---CcE-EEecccc--cccccC--HHHHHH----
Q 039837 108 IMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG---LPI-IVLGEER--IESAIN--WSELIE---- 175 (544)
Q Consensus 108 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~---~~~-~~~~~~~--~~~~~~--~~~~~~---- 175 (544)
|+++|++++++++.++.+++.++++.++++++|++........... ... +.+.... ...... +.....
T Consensus 88 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (534)
T PRK05852 88 ASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLDAATEPTPA 167 (534)
T ss_pred HHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccccccccCCCcc
Confidence 9999999999999999999999999999999998765332211110 011 1111000 000000 000000
Q ss_pred -hhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccce
Q 039837 176 -AADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGK 254 (544)
Q Consensus 176 -~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 254 (544)
..............+||||||.||||.++|+++.+.+......+ ++..++++++.+|++|.+|+...++.++..|++
T Consensus 168 ~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~ 245 (534)
T PRK05852 168 TSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGY--RLSPRDATVAVMPLYHGHGLIAALLATLASGGA 245 (534)
T ss_pred ccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh--CCCCcceEEEecCcchhHHHHHHHHHHHhcCCe
Confidence 00000112234678999999999999999999999888777766 678899999999999999998889999999999
Q ss_pred EEEcC--ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCC--ccCccccccccEEEecCCCCHhHHHHHHhhcCCCe
Q 039837 255 VVMMN--RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVD--EFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQ 330 (544)
Q Consensus 255 ~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~ 330 (544)
+++.. .+++..+++.++++++|.++++|+++..|.+..... ....++++. ++++|+++++++++.+.+.+ ++.
T Consensus 246 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~--i~~~G~~~~~~~~~~~~~~~-~~~ 322 (534)
T PRK05852 246 VLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRF--IRSCSAPLTAETAQALQTEF-AAP 322 (534)
T ss_pred EEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeE--EEECCCCCCHHHHHHHHHHh-CCC
Confidence 88854 467889999999999999999999999998765422 223456666 99999999999999999998 899
Q ss_pred EEecccCccccccccccCCCCC---CCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhh
Q 039837 331 VQEAYGLTEHSCITLTYGDPAN---PSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEE 407 (544)
Q Consensus 331 i~~~yG~tE~~~~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~ 407 (544)
+++.||+||++..++....... .......+..|. .++++++++| ++++++++|+.|||+++|+.+++||+++++.
T Consensus 323 v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~ 400 (534)
T PRK05852 323 VVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVG-SDGLPLPAGAVGEVWLRGTTVVRGYLGDPTI 400 (534)
T ss_pred hhhccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEEC-CCCCCCCCCCceEEEEecCcccchhcCCccc
Confidence 9999999999876654321100 001122334444 6999999999 5789999999999999999999999999999
Q ss_pred hhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEe
Q 039837 408 TARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVM 487 (544)
Q Consensus 408 ~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 487 (544)
+...| .+|||+|||+|++|+||++++.||.+|+|+.+|.+++|.+||++|.++|+|.+++|++.++...++.++++++.
T Consensus 401 t~~~~-~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~ 479 (534)
T PRK05852 401 TAANF-TDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVP 479 (534)
T ss_pred chhhh-cCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEE
Confidence 98888 67999999999999999999999999999999999999999999999999999999999988888899999998
Q ss_pred CCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 488 NPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 488 ~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
.+....+.+++.++++++|+.+++|..++++++||+|.+||++|++|+++|..
T Consensus 480 ~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 480 RESAPPTAEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred CCCCCCCHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHHHhcc
Confidence 77666788999999999999999999999999999999999999999998854
No 26
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.8e-68 Score=547.35 Aligned_cols=492 Identities=33% Similarity=0.519 Sum_probs=426.1
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
..++.+.|.+.++.+|+++|+.+. ++++||+||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 4 ~~~i~~~l~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~ 81 (513)
T PRK07656 4 WMTLPELLARAARRFGDKEAYVFG--DQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAV 81 (513)
T ss_pred cccHHHHHHHHHHHCCCCeEEEeC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeE
Confidence 468999999999999999999986 789999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC-----CCcEEE-ecccccc----cccCHHHHHHhhhh-----
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL-----GLPIIV-LGEERIE----SAINWSELIEAADK----- 179 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~~~-~~~~~~~----~~~~~~~~~~~~~~----- 179 (544)
++|+++..+.+.+..++++++++++++++......... ....+. ....... ....++.+......
T Consensus 82 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (513)
T PRK07656 82 VVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLAAGDPAERAP 161 (513)
T ss_pred EEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHhcCCCCCCcC
Confidence 99999999999999999999999999988765543321 122222 2111111 11344544432111
Q ss_pred -cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEc
Q 039837 180 -AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMM 258 (544)
Q Consensus 180 -~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 258 (544)
........+.+||||||.||+|.+||+++.+.+......+ ++..+++++..+|++|.+++...++.++..|+++++.
T Consensus 162 ~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 239 (513)
T PRK07656 162 EVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL--GLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL 239 (513)
T ss_pred CCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh--CCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec
Confidence 1112234567899999999999999999998887777666 7788999999999999999888889999999999998
Q ss_pred CccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCC-eEEecccC
Q 039837 259 NRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGV-QVQEAYGL 337 (544)
Q Consensus 259 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~-~i~~~yG~ 337 (544)
+..++..+++.++++++|++.++|+++..|.+........+++++. +++||+++++++.+.|.+.+ ++ .+++.||+
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~--v~~~g~~~~~~~~~~~~~~~-~~~~~~~~YG~ 316 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRL--AVTGAASMPVALLERFESEL-GVDIVLTGYGL 316 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceee--EEecCCCCCHHHHHHHHHHc-CCCceEeEEcc
Confidence 8889999999999999999999999999999887666666777777 99999999999999999998 56 89999999
Q ss_pred ccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCe
Q 039837 338 TEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGW 417 (544)
Q Consensus 338 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 417 (544)
||+++++..+..... .....+++|.|+++++++++| +++.+++.|+.|||+++|+.++.||++++..+...+..++|
T Consensus 317 tE~~~~~~~~~~~~~--~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 393 (513)
T PRK07656 317 SEASGVTTFNRLDDD--RKTVAGTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGW 393 (513)
T ss_pred ccCCCceeecCcccc--ccccCCCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCc
Confidence 999877665431111 112257899999999999999 57899999999999999999999999999999888867899
Q ss_pred eecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHH
Q 039837 418 LHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDD 497 (544)
Q Consensus 418 ~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 497 (544)
|+|||+|+++++|.+++.||.+|+++++|.++++.+||++|.++++|.+++|++.++...|+.++++++..++...+.++
T Consensus 394 ~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~ 473 (513)
T PRK07656 394 LHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGAELTEEE 473 (513)
T ss_pred eeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999998888888899999987766778899
Q ss_pred HHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHH
Q 039837 498 IMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKD 536 (544)
Q Consensus 498 l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~ 536 (544)
+.++++++|+++++|..++++++||+|++||++|++|++
T Consensus 474 l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 474 LIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred HHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 999999999999999999999999999999999999875
No 27
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.1e-68 Score=545.55 Aligned_cols=483 Identities=24% Similarity=0.365 Sum_probs=418.6
Q ss_pred CHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHHHhcCee
Q 039837 37 TLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRS-LGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF 115 (544)
Q Consensus 37 ~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 115 (544)
.+.+.|+++|+.+|+++|+++. ++.+||+||.++++++|++|++ .|+++||+|+++++|+++++++++||+++|+++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~ 80 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIA 80 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 5788999999999999999986 7899999999999999999985 699999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----CcEEEecccccccccCHHHHHHhh----hhcCCCCCC
Q 039837 116 SGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----LPIIVLGEERIESAINWSELIEAA----DKAGNNFSN 186 (544)
Q Consensus 116 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 186 (544)
+|+++.++.+++..+++.+++++++++++....+.+.. ...+.+.+ +....... .........
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 152 (496)
T PRK06839 81 VPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISITS--------LKEIEDRKIDNFVEKNESASF 152 (496)
T ss_pred EecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEecc--------hHhhhccCCCCCCCCCCCCcE
Confidence 99999999999999999999999999987765544322 11222211 11111110 011112234
Q ss_pred CCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHH
Q 039837 187 DDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAF 266 (544)
Q Consensus 187 ~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~ 266 (544)
.+.+||||||.||+|.+||+++..........+ ....+++++..+|++|.+|+...++.++..|+++++.+.+++..+
T Consensus 153 ~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~ 230 (496)
T PRK06839 153 IICYTSGTTGKPKGAVLTQENMFWNALNNTFAI--DLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTKA 230 (496)
T ss_pred EEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc--CCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHHH
Confidence 667899999999999999999877665555555 677889999999999999987777889999999999888999999
Q ss_pred HHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccc
Q 039837 267 LDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLT 346 (544)
Q Consensus 267 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~ 346 (544)
++.++++++|++.++|+++..|++.......++++++. +++||+++++++.+.+.+. ++++++.||+||++..+..
T Consensus 231 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~--~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~ 306 (496)
T PRK06839 231 LSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRW--FYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTVFM 306 (496)
T ss_pred HHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccce--EEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcceEe
Confidence 99999999999999999999999876655566777777 9999999999999999886 8999999999999875543
Q ss_pred cCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEE
Q 039837 347 YGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYI 426 (544)
Q Consensus 347 ~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~ 426 (544)
... .......+++|+|+++++++|+| +++..++.|+.|||+|+|+.++.||+++++.+...+ .+|||+|||++++
T Consensus 307 ~~~---~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~ 381 (496)
T PRK06839 307 LSE---EDARRKVGSIGKPVLFCDYELID-ENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETI-QDGWLCTGDLARV 381 (496)
T ss_pred ccc---ccccccCCCCcccCCCceEEEEC-CCcCCCCCCCceEEEEECCCcchhhcCChHHHHHHH-cCCCeeecceEEE
Confidence 321 11234567899999999999999 466779999999999999999999999999988777 6899999999999
Q ss_pred cCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcc
Q 039837 427 DDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNV 506 (544)
Q Consensus 427 ~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 506 (544)
+++|.+++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|++.+++..++.+++++++.++...+.+++++++++.|
T Consensus 382 ~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l 461 (496)
T PRK06839 382 DEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSVLIEKDVIEHCRLFL 461 (496)
T ss_pred cCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999988889999999998877778899999999999
Q ss_pred cCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 507 ATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 507 ~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
+.+++|..+++++++|+|.+||++|++|+++.++
T Consensus 462 ~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 462 AKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred cCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 9999999999999999999999999999987753
No 28
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-67 Score=556.99 Aligned_cols=498 Identities=24% Similarity=0.339 Sum_probs=407.9
Q ss_pred CCH-HHHHHhhhhhcCCceEEEEcc----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHH
Q 039837 36 VTL-PDFVLQDAELYADKVAFVEAV----SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMA 110 (544)
Q Consensus 36 ~~l-~~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~ 110 (544)
.|+ ...|.++++.+|+++|+++.. +.+++||+||.+++.++|++|++.|+++||+|+++++|++++++++|||++
T Consensus 66 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 145 (637)
T PRK00174 66 LNVSYNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACAR 145 (637)
T ss_pred eEHHHHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 344 355777888899999998642 235899999999999999999999999999999999999999999999999
Q ss_pred hcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHH---------Hhh----cC-CCcEE-Eeccccc------ccccC
Q 039837 111 AGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYE---------KVK----GL-GLPII-VLGEERI------ESAIN 169 (544)
Q Consensus 111 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~----~~-~~~~~-~~~~~~~------~~~~~ 169 (544)
+|++++|+++.++.+++.++++.++++++|+++.... .+. .. ..+.+ .++.... .....
T Consensus 146 ~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (637)
T PRK00174 146 IGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVDWVEGRDLW 225 (637)
T ss_pred cCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcCcCCCCccc
Confidence 9999999999999999999999999999999765321 111 11 12222 2221110 01122
Q ss_pred HHHHHHhhhh------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHh-hccccCCcccCccEEEEecchhHHHHHH
Q 039837 170 WSELIEAADK------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCS-TLFSVVPEMIGQVTTLGLIPFFHIYGIT 242 (544)
Q Consensus 170 ~~~~~~~~~~------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 242 (544)
+.++...... ........+.+||||||.||||+++|++++..... ....+ ++..+++++...|++|..++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~ 303 (637)
T PRK00174 226 WHELVAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVF--DYKDGDVYWCTADVGWVTGHS 303 (637)
T ss_pred HHHHHhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhcc--CCCCCcEEEEcCCchHhhhhH
Confidence 3443322111 11123345789999999999999999998755433 22333 667889999999999999887
Q ss_pred HHHHhhHhccceEEEcCc----cCHHHHHHHHHHcCceeeecchHHHHHHhcCCCC--CccCccccccccEEEecCCCCH
Q 039837 243 GICCATLRNKGKVVMMNR----FELRAFLDALITHEVTFAPIVPPIILSLVKDPIV--DEFDLSKLQLRAVMTAAAPLAP 316 (544)
Q Consensus 243 ~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~v~~~G~~~~~ 316 (544)
..++.++..|+++++.+. .++..+++.++++++|++.++|+++..|++.... ...+++++|. ++++|+++++
T Consensus 304 ~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~--i~~~Ge~l~~ 381 (637)
T PRK00174 304 YIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRL--LGSVGEPINP 381 (637)
T ss_pred HHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeE--EEEeCCCCCH
Confidence 788999999999998753 4789999999999999999999999999876532 2345677777 9999999999
Q ss_pred hHHHHHHhhcC--CCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEec
Q 039837 317 DLLSSFEKKFP--GVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRS 394 (544)
Q Consensus 317 ~~~~~~~~~~~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~ 394 (544)
++++++.+.++ ++++++.||+||++..+..... . ......+++|+|++|++++|+| ++|++++.|+.|||+++|
T Consensus 382 ~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~-~--~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel~v~g 457 (637)
T PRK00174 382 EAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLP-G--ATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNLVIKD 457 (637)
T ss_pred HHHHHHHHHhCCCCCceEecccccccCCceEecCC-C--CCCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEEEEcC
Confidence 99999998874 3789999999999876543221 0 0223457899999999999999 689999999999999999
Q ss_pred --ccccccccCChhhhhccc--CCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEE
Q 039837 395 --QCVMQGYYNNEEETARTI--DKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVV 470 (544)
Q Consensus 395 --~~~~~gy~~~~~~~~~~~--~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 470 (544)
|+++.|||++++.+...+ ..+|||+|||+|+++++|++++.||.||+||++|++|+|.+||++|.++|+|.+++|+
T Consensus 458 ~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~Vv 537 (637)
T PRK00174 458 PWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAVV 537 (637)
T ss_pred CCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEEE
Confidence 689999999998877654 3478999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceeEEEEEeCCCCCCC---HHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 471 SLPDEEAGEIPAACVVMNPNAKES---EDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 471 ~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
+.+++..|+.+++++++.++...+ .++|.++++++|+.+++|..++++++||+|.+||++|+.|++.+.++
T Consensus 538 g~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 538 GRPDDIKGQGIYAFVTLKGGEEPSDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred eeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 999988899999999988765544 46899999999999999999999999999999999999999987543
No 29
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.2e-67 Score=548.32 Aligned_cols=502 Identities=28% Similarity=0.453 Sum_probs=426.8
Q ss_pred CCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 34 ENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 34 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
...|+.+.|.+.++++|+++|+++...++.+||+||.+++.++|.+|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 16 ~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~ 95 (558)
T PRK12583 16 LTQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGA 95 (558)
T ss_pred ccCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCC
Confidence 34589999999999999999998865568999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchH-----HHhhcC---------------C---C-cEEEecccccccccC
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIY-----EKVKGL---------------G---L-PIIVLGEERIESAIN 169 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~---------------~---~-~~~~~~~~~~~~~~~ 169 (544)
+++++++.++.+++..+++.++++++++++... ..+... . . ..+..+.........
T Consensus 96 ~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (558)
T PRK12583 96 ILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPGFLA 175 (558)
T ss_pred EEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCccccc
Confidence 999999999999999999999999999875421 111100 0 0 111111111112223
Q ss_pred HHHHHHhhh------------hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhH
Q 039837 170 WSELIEAAD------------KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFH 237 (544)
Q Consensus 170 ~~~~~~~~~------------~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 237 (544)
|+....... ...........+||||||.||+|.+||+++.+.+......+ ++..+++++..+|++|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~~~~~p~~~ 253 (558)
T PRK12583 176 WHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESL--GLTEHDRLCVPVPLYH 253 (558)
T ss_pred hHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHh--CCCCCCeEEEecCchh
Confidence 333322110 01122233568999999999999999999998888777666 7788899999999999
Q ss_pred HHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCH
Q 039837 238 IYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAP 316 (544)
Q Consensus 238 ~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~ 316 (544)
.+|....++.++..|+++++.. .+++..+++.++++++|++.++|+++..+++.......++++++. +++||+++++
T Consensus 254 ~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~--i~~~G~~~~~ 331 (558)
T PRK12583 254 CFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRT--GIMAGAPCPI 331 (558)
T ss_pred hhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheE--EEecCCCCCH
Confidence 9999888999999999998653 578999999999999999999999999888766555556777777 9999999999
Q ss_pred hHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEeccc
Q 039837 317 DLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQC 396 (544)
Q Consensus 317 ~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~ 396 (544)
++.+++.+.+++..+++.||+||++.++...... ........++|+|++++.++|+|++ +.+++.|+.|||+++|+.
T Consensus 332 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~--~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~g~~ 408 (558)
T PRK12583 332 EVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAA--DDLERRVETVGRTQPHLEVKVVDPD-GATVPRGEIGELCTRGYS 408 (558)
T ss_pred HHHHHHHHHcCCcceeccccccccccceeccCcc--cccccccCCCCccCCCCeEEEECCC-CCCCCCCCeeEEEEEeCc
Confidence 9999999998667899999999999876544311 1123356789999999999999964 899999999999999999
Q ss_pred ccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCC
Q 039837 397 VMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEE 476 (544)
Q Consensus 397 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 476 (544)
++.||++++..+...++.++||+|||+|+++++|++++.||.+|+|+++|.+|+|.+||++|.++|+|.+++|+++++..
T Consensus 409 ~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~ 488 (558)
T PRK12583 409 VMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVFGVPDEK 488 (558)
T ss_pred cchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHHhCCCeeEEEEEeeecCC
Confidence 99999999999988887889999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhh
Q 039837 477 AGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 542 (544)
Q Consensus 477 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~ 542 (544)
.++.++++++..++...+.+++.++++++|+++++|..+++++++|+|.+||++|++|+++..+++
T Consensus 489 ~~~~~~~~v~~~~~~~~~~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~~L~~~~~~~~ 554 (558)
T PRK12583 489 YGEEIVAWVRLHPGHAASEEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMREISIEEL 554 (558)
T ss_pred CCcEEEEEEEECCCCCCCHHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHHHHHHHHHhhc
Confidence 788899999988776677899999999999999999999999999999999999999999987765
No 30
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-67 Score=551.30 Aligned_cols=494 Identities=26% Similarity=0.427 Sum_probs=415.9
Q ss_pred CCCHH-HHHHhhhh-hcCCceEEEEcc--CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHH
Q 039837 35 NVTLP-DFVLQDAE-LYADKVAFVEAV--SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMA 110 (544)
Q Consensus 35 ~~~l~-~~l~~~a~-~~p~~~a~~~~~--~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~ 110 (544)
..|+. +.+.++|. .+|+++|+.+.. ..+++||+||.++++++|.+|.+.|+++||+|+++++|++++++++|||++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~ 120 (570)
T PRK04319 41 KVNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALK 120 (570)
T ss_pred ceeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 34444 67777776 589999998642 236899999999999999999999999999999999999999999999999
Q ss_pred hcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC---Cc-EEEecccc--cccccCHHHHHHhhhh-----
Q 039837 111 AGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG---LP-IIVLGEER--IESAINWSELIEAADK----- 179 (544)
Q Consensus 111 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~---~~-~~~~~~~~--~~~~~~~~~~~~~~~~----- 179 (544)
+|++++|+++.++.+++.++++.+++++++++........... .. .+.++... ......+.+.......
T Consensus 121 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (570)
T PRK04319 121 NGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLDFNALMEQASDEFDIE 200 (570)
T ss_pred cCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccCHHHHHhhcCCcCCcc
Confidence 9999999999999999999999999999999877654432111 12 22232211 1122345444332111
Q ss_pred -cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEc
Q 039837 180 -AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMM 258 (544)
Q Consensus 180 -~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 258 (544)
..........+||||||.||||++||+++.+.+......+ ++..++++++..|++|.+|+...++.++..|+++++.
T Consensus 201 ~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~ 278 (570)
T PRK04319 201 WTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVL--DLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVID 278 (570)
T ss_pred ccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhc--CCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEE
Confidence 1122344667999999999999999999998877766666 6778899999999999998878889999999999887
Q ss_pred C-ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCC--CCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecc
Q 039837 259 N-RFELRAFLDALITHEVTFAPIVPPIILSLVKDPI--VDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAY 335 (544)
Q Consensus 259 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 335 (544)
. .+++..+++.++++++|++.++|+++..|++... ....++++++. ++++|+++++++.+++.+.+ +.++++.|
T Consensus 279 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~--~~~gG~~l~~~~~~~~~~~~-g~~i~~~Y 355 (570)
T PRK04319 279 GGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRH--ILSVGEPLNPEVVRWGMKVF-GLPIHDNW 355 (570)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceE--EEEcccCCCHHHHHHHHHHh-CCCeEece
Confidence 5 5789999999999999999999999999987543 22345677777 99999999999999999988 78999999
Q ss_pred cCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEec--ccccccccCChhhhhcccC
Q 039837 336 GLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRS--QCVMQGYYNNEEETARTID 413 (544)
Q Consensus 336 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~ 413 (544)
|+||++..+.... .......+++|+|+++++++|+| +++.+++.|+.|||+++| +.++.|||++++.+.+.|.
T Consensus 356 G~tE~~~~~~~~~----~~~~~~~~~~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~ 430 (570)
T PRK04319 356 WMTETGGIMIANY----PAMDIKPGSMGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFA 430 (570)
T ss_pred eecccCCEEEecC----CCCCCCCCcCcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhc
Confidence 9999987654322 11234567899999999999999 678888999999999997 8999999999999998884
Q ss_pred CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCC
Q 039837 414 KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKE 493 (544)
Q Consensus 414 ~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 493 (544)
+|||+|||+++++++|++++.||.+|+|+++|++|+|.+||++|.++|.|.+++|++.+++..++.+++++++.++...
T Consensus 431 -~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~~ 509 (570)
T PRK04319 431 -GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGYEP 509 (570)
T ss_pred -CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999998889999999998876544
Q ss_pred CH---HHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 494 SE---DDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 494 ~~---~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
+. +++.++++++|+.+++|..++++++||+|++||++|++|+++..
T Consensus 510 ~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~ 558 (570)
T PRK04319 510 SEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWEL 558 (570)
T ss_pred CHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHh
Confidence 33 58899999999999999999999999999999999999999864
No 31
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-67 Score=546.62 Aligned_cols=500 Identities=27% Similarity=0.423 Sum_probs=431.9
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhc
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAG 112 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G 112 (544)
....|+.++|...|+.+|+++|+.+. ++.+||+||.+++.++|+.|.+.|+++||+|+++++|+.+++++++||+++|
T Consensus 8 ~~~~~l~~~l~~~a~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G 85 (523)
T PRK08316 8 ARRQTIGDILRRSARRYPDKTALVFG--DRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAG 85 (523)
T ss_pred ccCCCHHHHHHHHHHHCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 34568999999999999999999986 6899999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC----CcEEEecc-----cccccccCHHHHHHhhh-----
Q 039837 113 GVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG----LPIIVLGE-----ERIESAINWSELIEAAD----- 178 (544)
Q Consensus 113 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~~~~----- 178 (544)
++++|+++..+.+++..+++.+++++++++.+....+.... ........ ........+........
T Consensus 86 ~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (523)
T PRK08316 86 AVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFADWAEAGSVAEPD 165 (523)
T ss_pred cEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHHHHhcCCCccCc
Confidence 99999999999999999999999999999988766554321 11111100 01111223333322111
Q ss_pred -hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEE
Q 039837 179 -KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVM 257 (544)
Q Consensus 179 -~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~ 257 (544)
...........+||||||.||+|.+||+++..........+ ++..+++++..+|++|.+++...++.++..|+++++
T Consensus 166 ~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~ 243 (523)
T PRK08316 166 VELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAG--DMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVI 243 (523)
T ss_pred cCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHh--CCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEE
Confidence 11122234567899999999999999999998877766666 678899999999999999987677788999999999
Q ss_pred cCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccC
Q 039837 258 MNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGL 337 (544)
Q Consensus 258 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 337 (544)
.+..++..+++.++++++|++.++|+++..|++.......++++++. +++||+.++.++.+.+.+.+++.++++.||+
T Consensus 244 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~ 321 (523)
T PRK08316 244 LDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRK--GYYGASIMPVEVLKELRERLPGLRFYNCYGQ 321 (523)
T ss_pred ecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceE--EEEcCCcCCHHHHHHHHHHcCCCceeeeecc
Confidence 98889999999999999999999999999999877655666777777 9999999999999999999988999999999
Q ss_pred ccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCe
Q 039837 338 TEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGW 417 (544)
Q Consensus 338 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 417 (544)
||++.+....... ......+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||+++++.+...| .++|
T Consensus 322 tE~~~~~~~~~~~---~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~-~~~~ 396 (523)
T PRK08316 322 TEIAPLATVLGPE---EHLRRPGSAGRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAF-RGGW 396 (523)
T ss_pred cccCccccccCcc---ccccccCCcccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHh-hCCC
Confidence 9998766554311 1224457899999999999999 678999999999999999999999999999998888 6899
Q ss_pred eecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHH
Q 039837 418 LHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDD 497 (544)
Q Consensus 418 ~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 497 (544)
|+|||+|+++++|.+++.||.+|+|+++|.+++|.+||+.|+++++|.+++|++.+++..++.++++++..++...+.++
T Consensus 397 ~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 476 (523)
T PRK08316 397 FHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGATVTEDE 476 (523)
T ss_pred eeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888999999988776677889
Q ss_pred HHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhhh
Q 039837 498 IMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKMR 543 (544)
Q Consensus 498 l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~~ 543 (544)
+.++++++++++++|..+++++++|+|++||++|++|+++|.+.++
T Consensus 477 l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~~ 522 (523)
T PRK08316 477 LIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAFT 522 (523)
T ss_pred HHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999988775
No 32
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=5.2e-68 Score=558.43 Aligned_cols=499 Identities=19% Similarity=0.250 Sum_probs=390.8
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEcc-----CC--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHH
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEAV-----SG--KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVA 105 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~~-----~~--~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~ 105 (544)
+...|+.++|.++++++|+++|+.+.. .+ ..+||+||.++++++|++|++.|+++||+|+++++|+++|++++
T Consensus 42 ~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~ 121 (666)
T PLN02614 42 EGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISM 121 (666)
T ss_pred CCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 344599999999999999999997421 11 35899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC------Cc-EEEeccccc----------cccc
Q 039837 106 LGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG------LP-IIVLGEERI----------ESAI 168 (544)
Q Consensus 106 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~------~~-~~~~~~~~~----------~~~~ 168 (544)
+||+++|+++||+++.++.+++.+++++++++++|++.+....+.... ++ ++.++.... ....
T Consensus 122 lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~ 201 (666)
T PLN02614 122 EACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIY 201 (666)
T ss_pred HHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEE
Confidence 999999999999999999999999999999999999876554442211 22 233321100 0123
Q ss_pred CHHHHHHhhhh-------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccC---CcccCccEEEEecchhHH
Q 039837 169 NWSELIEAADK-------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVV---PEMIGQVTTLGLIPFFHI 238 (544)
Q Consensus 169 ~~~~~~~~~~~-------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~ 238 (544)
.++++...... ........+.|||||||.||||++||+++.+.+......+. ..+..+|++++++|++|.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~ 281 (666)
T PLN02614 202 AWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHI 281 (666)
T ss_pred EHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHH
Confidence 45554432111 11223345689999999999999999999987765543321 145788999999999999
Q ss_pred HHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCC----C-------------------
Q 039837 239 YGITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIV----D------------------- 295 (544)
Q Consensus 239 ~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----~------------------- 295 (544)
++.. ..+.++..|+++++.+ .++..+++.++++++|+++++|+++..+.+.... .
T Consensus 282 ~~~~-~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 359 (666)
T PLN02614 282 FDRV-IEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNM 359 (666)
T ss_pred HHHH-HHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 9984 4566778999998875 5889999999999999999999999887642100 0
Q ss_pred --------cc-------------Cc-cccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCC
Q 039837 296 --------EF-------------DL-SKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANP 353 (544)
Q Consensus 296 --------~~-------------~~-~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~ 353 (544)
.. .+ +++++ +++||+++++++ ++|.+.++++.+++.||+||++...+... +
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~--~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~----~ 432 (666)
T PLN02614 360 KKGQSHVEASPLCDKLVFNKVKQGLGGNVRI--ILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSL----P 432 (666)
T ss_pred HcCCCCcccchHHHHHHHHHHHHHhCCcEEE--EEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeec----c
Confidence 00 01 34555 999999999875 66777775689999999999876543322 1
Q ss_pred CCCCCCCcccccCCCceEEEEeC-C-CCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCc
Q 039837 354 SAGSKKNSVGFILPNLEVKFINP-E-TGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGD 431 (544)
Q Consensus 354 ~~~~~~~~~G~~~~~~~~~i~d~-~-~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 431 (544)
......+++|+|+|+++++|+|. + .+.+++.|+.|||+|+||+++.|||++|+.|.+.| .+|||+|||+|++|+||+
T Consensus 433 ~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~ 511 (666)
T PLN02614 433 DELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVL-IDGWLHTGDVGEWQPNGS 511 (666)
T ss_pred ccCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhh-ccCCcccceEEEEcCCCC
Confidence 11234679999999999999983 3 24678999999999999999999999999999998 589999999999999999
Q ss_pred EEEEeecCCceee-cceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCC----------CCCH-----
Q 039837 432 IFIVDRIKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNA----------KESE----- 495 (544)
Q Consensus 432 ~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~----------~~~~----- 495 (544)
+++.||.+|+||+ +|++|+|.+||++|.+||.|.+++|++.+.. ..++|++++.... ..+.
T Consensus 512 l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~---~~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~ 588 (666)
T PLN02614 512 MKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFE---SFLVAIANPNQQILERWAAENGVSGDYNALCQ 588 (666)
T ss_pred EEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCc---ceEEEEEeCCHHHHHHHHHhcCCCcCHHHHhc
Confidence 9999999999997 7999999999999999999999999987633 3688888875421 0011
Q ss_pred -----HHHHHHH-----HhcccCCCceeEEEEeec-C-----CCCCCcccchHHHHHHHHHhhhC
Q 039837 496 -----DDIMDFV-----ASNVATYKKVRVLHFVDG-I-----PKSHSGKIMRRILKDKMLEKMRK 544 (544)
Q Consensus 496 -----~~l~~~l-----~~~l~~~~~p~~~~~~~~-~-----P~t~~GKi~r~~l~~~~~~~~~~ 544 (544)
+.+.+.+ ++.|+.+.+++.|+.+.+ | .+|+++|++|..+.+.|+++|++
T Consensus 589 ~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i~~ 653 (666)
T PLN02614 589 NEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVIDE 653 (666)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHHHH
Confidence 1222322 345999999999988743 2 48999999999999999999863
No 33
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=3.8e-67 Score=543.17 Aligned_cols=488 Identities=25% Similarity=0.394 Sum_probs=416.7
Q ss_pred CCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 34 ENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 34 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
...|+.++|+++|+.+|+++|+++. ++.+||+||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 19 ~~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~ 96 (542)
T PRK06155 19 SERTLPAMLARQAERYPDRPLLVFG--GTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGA 96 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeC--CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCC
Confidence 4568999999999999999999986 68999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----C-cEEEecccccc-cccCHHH--HHHhh-----hh
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----L-PIIVLGEERIE-SAINWSE--LIEAA-----DK 179 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~-~~~~~~~~~~~-~~~~~~~--~~~~~-----~~ 179 (544)
+++|+++.++.+++..+++.+++++++++.+....+.... . ..+.++..... ....+.. ..... ..
T Consensus 97 ~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (542)
T PRK06155 97 IAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAPLPPLDAPAPAAA 176 (542)
T ss_pred EEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhhhcccCCCCCCCC
Confidence 9999999999999999999999999999987766654432 1 22333321110 0001110 00000 00
Q ss_pred cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC
Q 039837 180 AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN 259 (544)
Q Consensus 180 ~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 259 (544)
........+.+||||||.||+|+++|+++..........+ ++..++++++.+|++|..++ ..++.++..|+++++.+
T Consensus 177 ~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~--~~~~~~~~l~~~pl~~~~~~-~~~~~~l~~G~~~~~~~ 253 (542)
T PRK06155 177 VQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDL--EIGADDVLYTTLPLFHTNAL-NAFFQALLAGATYVLEP 253 (542)
T ss_pred CCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhc--CCCCCCEEEEecCHHHHHHH-HHHHHHHHcCceEEeeC
Confidence 1122334578899999999999999999988776666666 77889999999999999988 45689999999999998
Q ss_pred ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCcc
Q 039837 260 RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTE 339 (544)
Q Consensus 260 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE 339 (544)
.+++..+++.++++++|++.++|+++..|.+.........++++. ++.+| +++++.+.+.+.+ ++++++.||+||
T Consensus 254 ~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~--~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~tE 328 (542)
T PRK06155 254 RFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRV--ALGPG--VPAALHAAFRERF-GVDLLDGYGSTE 328 (542)
T ss_pred CCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEE--EEEcC--CCHHHHHHHHHHc-CCCEEeeecccc
Confidence 889999999999999999999999999998876555445555555 66555 6788999999988 899999999999
Q ss_pred ccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecc---cccccccCChhhhhcccCCCC
Q 039837 340 HSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQ---CVMQGYYNNEEETARTIDKNG 416 (544)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~~~ 416 (544)
++.++.... .....+++|.+.++++++|+| +++++++.|+.|||+++|+ +++.||+++++.+...| .++
T Consensus 329 ~~~~~~~~~------~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-~~~ 400 (542)
T PRK06155 329 TNFVIAVTH------GSQRPGSMGRLAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAW-RNL 400 (542)
T ss_pred cCccccCCC------CCCCCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhh-cCC
Confidence 987665432 234567899999999999999 5789999999999999998 69999999999998887 689
Q ss_pred eeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHH
Q 039837 417 WLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESED 496 (544)
Q Consensus 417 ~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~ 496 (544)
||+|||+|+++++|++++.||.+|+|+++|.+++|.+||++|.++|+|.+++|+++++...++.+.+++++.++...+..
T Consensus 401 ~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~~~~~ 480 (542)
T PRK06155 401 WFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTALEPV 480 (542)
T ss_pred cEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999988778888888888877777889
Q ss_pred HHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 497 DIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 497 ~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
+++++++++++.+++|..+++++++|+|.+||++|++|++++.
T Consensus 481 ~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 481 ALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred HHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhcc
Confidence 9999999999999999999999999999999999999999764
No 34
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.1e-68 Score=564.44 Aligned_cols=476 Identities=20% Similarity=0.292 Sum_probs=401.1
Q ss_pred CCHHHHHHhhhhh--cCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 36 VTLPDFVLQDAEL--YADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 36 ~~l~~~l~~~a~~--~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
.|+.++|.++|.. +||++|+.+. ..+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~ 80 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA---DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGV 80 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec---CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 4889999998886 7999999864 4799999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHHhh----hhcCCCCCCCCC
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAA----DKAGNNFSNDDD 189 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 189 (544)
+++|++|.++.+++.+++++++++++|++......+.... ...... . +....... ........+++.
T Consensus 81 ~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~~~~~~-~------~~~~~~~~~~~~~~~~~~~~a~il 151 (705)
T PRK06060 81 MAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPSR--VAEAAE-L------MSEAARVAPGGYEPMGGDALAYAT 151 (705)
T ss_pred EEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcccc--cchhhh-h------hhhccccCCCCCCCCCCCCeEEEE
Confidence 9999999999999999999999999999876554432211 000000 0 00000000 001112334678
Q ss_pred CCCCCCcCcceeeccHHHHHHHHHhhc-cccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHH
Q 039837 190 VKQTDLWISKGVMLTHRNLVANLCSTL-FSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFL 267 (544)
Q Consensus 190 ~tsgttG~PKgV~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~ 267 (544)
+||||||.||||+++|+++.+.+.... ..+ ++...++++...|++|.+++...++.++..|+++++.+ .+++..+.
T Consensus 152 ~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~ 229 (705)
T PRK06060 152 YTSGTTGPPKAAIHRHADPLTFVDAMCRKAL--RLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAA 229 (705)
T ss_pred ECCCCCCCCcEEEEccccHHHHHHHHHHHhh--CCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHH
Confidence 999999999999999999988776543 234 66788999999999999888677888999999999876 46788889
Q ss_pred HHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCcccccccccc
Q 039837 268 DALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTY 347 (544)
Q Consensus 268 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~ 347 (544)
..+.++++|+++++|+++..+++... ...+++++. +++||+++++++.++|.+.|++++++|.||+||++..+...
T Consensus 230 ~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~--i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 305 (705)
T PRK06060 230 ILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRC--VVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSN 305 (705)
T ss_pred HHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeE--EEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEec
Confidence 99999999999999999999987543 234566666 99999999999999999999789999999999998655432
Q ss_pred CCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEc
Q 039837 348 GDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYID 427 (544)
Q Consensus 348 ~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~ 427 (544)
. ......+++|+|+++++++|+| +++++++.|+.|||+|+|++++.|||++++.+. ..++||+|||+|+++
T Consensus 306 ~-----~~~~~~~~iG~p~~~~~v~i~d-~~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~---~~~~~~~TGDl~~~~ 376 (705)
T PRK06060 306 R-----VDEWRLGTLGRVLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPV---ANEGWLDTRDRVCID 376 (705)
T ss_pred c-----CCCCCcCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEccchhhhhhhCCCcccc---cCCCcEECCeeEEEC
Confidence 2 1223457899999999999999 578999999999999999999999999988653 357999999999999
Q ss_pred CCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCH---HHHHHHHHh
Q 039837 428 DDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESE---DDIMDFVAS 504 (544)
Q Consensus 428 ~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~ 504 (544)
+||++++.||.||+||++|++|++.+||++|.+++.|.+++|++.++...++.++++++..++...+. .++.+++++
T Consensus 377 ~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~ 456 (705)
T PRK06060 377 SDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGATIDGSVMRDLHRGLLN 456 (705)
T ss_pred CCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccCcChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998877888999998776544433 478889999
Q ss_pred cccCCCceeEEEEeecCCCCCCcccchHHHHHHH
Q 039837 505 NVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 538 (544)
Q Consensus 505 ~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~ 538 (544)
+|+.|++|..++++++||+|.+||++|++|++++
T Consensus 457 ~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 457 RLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQS 490 (705)
T ss_pred hCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhc
Confidence 9999999999999999999999999999999875
No 35
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=9.9e-68 Score=550.60 Aligned_cols=496 Identities=19% Similarity=0.291 Sum_probs=398.1
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCC--------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHH
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSG--------KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVAL 106 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~--------~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~l 106 (544)
..|+.+.|.+.++++|+++|+++...+ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++
T Consensus 5 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~l 84 (552)
T PRK09274 5 MANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTF 84 (552)
T ss_pred hhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHH
Confidence 358899999999999999999875321 289999999999999999999999999999999999999999999
Q ss_pred HHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEecc--chHHHhhcCC---C-cEEEecccccccccCHHHHHHhhh--
Q 039837 107 GIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYA--PIYEKVKGLG---L-PIIVLGEERIESAINWSELIEAAD-- 178 (544)
Q Consensus 107 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~--~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~-- 178 (544)
||+++|++++|+++.++.+++.+++++++++++|+++ .....+.... . ..+.++.........+..+.....
T Consensus 85 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 164 (552)
T PRK09274 85 ALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRDGAAA 164 (552)
T ss_pred HHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCccHHHhcccCccc
Confidence 9999999999999999999999999999999999865 2222222111 1 122222111111122333221100
Q ss_pred -----hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccc
Q 039837 179 -----KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKG 253 (544)
Q Consensus 179 -----~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~ 253 (544)
...........+||||||.||+|++||+++.+.+......+ ++..+++.+..+|++|.+++ ..|.
T Consensus 165 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~~~~~~~~pl~~~~~~--------~~g~ 234 (552)
T PRK09274 165 PFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDY--GIEPGEIDLPTFPLFALFGP--------ALGM 234 (552)
T ss_pred cCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHh--CCCCCceeeeccCHHHhhhh--------hhCC
Confidence 01122334567899999999999999999999888777666 67888999999999876543 3466
Q ss_pred eEEEcC-------ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhc
Q 039837 254 KVVMMN-------RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKF 326 (544)
Q Consensus 254 ~~~~~~-------~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~ 326 (544)
++++.. .+++..+++.++++++|+++++|+++..|.+.......++++++. +++||+++++++.+++.+.|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~--~~~gG~~~~~~~~~~~~~~~ 312 (552)
T PRK09274 235 TSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRR--VISAGAPVPIAVIERFRAML 312 (552)
T ss_pred eEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhE--EEecCCcCCHHHHHHHHHHc
Confidence 776653 357899999999999999999999999998876555567778777 99999999999999999999
Q ss_pred C-CCeEEecccCccccccccccCCC-C----CCCCCCCCCcccccCCCceEEEEeCC--------CCCcCCCCCCceEEE
Q 039837 327 P-GVQVQEAYGLTEHSCITLTYGDP-A----NPSAGSKKNSVGFILPNLEVKFINPE--------TGKSLPSNTPGELCV 392 (544)
Q Consensus 327 ~-~~~i~~~yG~tE~~~~~~~~~~~-~----~~~~~~~~~~~G~~~~~~~~~i~d~~--------~~~~~~~g~~Gel~v 392 (544)
+ ++++++.||+||++.++...... . .........++|+|+++++++|+|++ ++++++.|+.|||++
T Consensus 313 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v 392 (552)
T PRK09274 313 PPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIVV 392 (552)
T ss_pred CCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEEE
Confidence 6 47999999999998765433211 0 00011223478999999999999852 467889999999999
Q ss_pred ecccccccccCChhhhhccc--CCCC--eeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceE
Q 039837 393 RSQCVMQGYYNNEEETARTI--DKNG--WLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAA 468 (544)
Q Consensus 393 ~~~~~~~gy~~~~~~~~~~~--~~~~--~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 468 (544)
+|+.++.|||++++.+...+ +.+| ||+|||+|+++++|++++.||.+|+|+++|.+|+|.+||++|.+||+|.+++
T Consensus 393 ~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~ 472 (552)
T PRK09274 393 AGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNTHPGVKRSA 472 (552)
T ss_pred ecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHhCcccceeE
Confidence 99999999999999988765 3456 9999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccC---CCceeEEEEeecCCCC--CCcccchHHHHHHHHHhhh
Q 039837 469 VVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVAT---YKKVRVLHFVDGIPKS--HSGKIMRRILKDKMLEKMR 543 (544)
Q Consensus 469 v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~---~~~p~~~~~~~~~P~t--~~GKi~r~~l~~~~~~~~~ 543 (544)
|++++++ .++.+++++++.++...+.+++.+.+++.+.. ++.|..++++++||+| .+|||+|++|++++.+++.
T Consensus 473 v~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~lP~t~~~~GKi~r~~L~~~~~~~~~ 551 (552)
T PRK09274 473 LVGVGVP-GAQRPVLCVELEPGVACSKSALYQELRALAAAHPHTAGIERFLIHPSFPVDIRHNAKIFREKLAVWAAKQLK 551 (552)
T ss_pred EEEeCCC-CCceEEEEEEccCccccchHHHhhhhHHHHHhcCCCcceeEEeccCCCCccccccccccHHHHHHHHHHhhc
Confidence 9999875 35678888888877666666677777665554 4567889999999999 7999999999999988764
No 36
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=9e-69 Score=650.00 Aligned_cols=522 Identities=20% Similarity=0.274 Sum_probs=445.2
Q ss_pred CCCCcceeeccccccCCccee-eecCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHH
Q 039837 2 AMPNSFSVPVPLAAAHDEEHI-FRSRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKAL 80 (544)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L 80 (544)
++|+..+..+++..+++..++ ..++....+.+...++.++|.++|+++|+++|+++. ++++||+||.++++++|..|
T Consensus 3060 ~~p~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L 3137 (3956)
T PRK12467 3060 NNPAARLGELPTLAAHERRQVLHAWNATAAAYPSERLVHQLIEAQVARTPEAPALVFG--DQQLSYAELNRRANRLAHRL 3137 (3956)
T ss_pred hCcCCchhhccCCCHHHHHHHHHhhccCCCCCCccccHHHHHHHHHHhCCCcceEeeC--CcccCHHHHHHHHHHHHHHH
Confidence 578888999999988887776 345555555666679999999999999999999997 78999999999999999999
Q ss_pred HHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC-CCcEEEe
Q 039837 81 RSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL-GLPIIVL 159 (544)
Q Consensus 81 ~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~ 159 (544)
.+.|+++|++|+++++|++++++++|||+++|++++|++|.++.+++.++++.+++++++++....+.+... ....+.+
T Consensus 3138 ~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~ 3217 (3956)
T PRK12467 3138 IAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTL 3217 (3956)
T ss_pred HHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceeee
Confidence 999999999999999999999999999999999999999999999999999999999999998776554332 1233333
Q ss_pred cccccccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHH
Q 039837 160 GEERIESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIY 239 (544)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 239 (544)
+......... . ...........+++.+||||||.||||+++|+++.+.+.+....+ ++..+++++.++|++|..
T Consensus 3218 ~~~~~~~~~~-~---~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~fd~ 3291 (3956)
T PRK12467 3218 DRLDLNGYSE-N---NPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAY--ELDANDRVLLFMSFSFDG 3291 (3956)
T ss_pred cchhhcccCC-C---CCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhc--CCCcCCEEEEecCccHhH
Confidence 3211100000 0 000011223345788999999999999999999999999888877 788999999999999998
Q ss_pred HHHHHHHhhHhccceEEEcCc--cCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHh
Q 039837 240 GITGICCATLRNKGKVVMMNR--FELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPD 317 (544)
Q Consensus 240 g~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~ 317 (544)
+. ..++.++..|+++++.+. .++..+++.|+++++|++.++|+++..|++... ...++++|. +++|||+++++
T Consensus 3292 ~~-~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~--~~~gGe~~~~~ 3366 (3956)
T PRK12467 3292 AQ-ERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDI--YVFGGEAVPPA 3366 (3956)
T ss_pred HH-HHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceE--EEEecCCCCHH
Confidence 86 788999999999999875 689999999999999999999999999987542 335667777 99999999999
Q ss_pred HHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccc
Q 039837 318 LLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCV 397 (544)
Q Consensus 318 ~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~ 397 (544)
+.++|.+.++++.++|.||+||++..++......+........++|+|++|++++|+| +.+++++.|+.|||+|+|+.+
T Consensus 3367 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v 3445 (3956)
T PRK12467 3367 AFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGL 3445 (3956)
T ss_pred HHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhh
Confidence 9999999888899999999999987666543322221223457899999999999999 689999999999999999999
Q ss_pred cccccCChhhhhcccCCCC-------eeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEE
Q 039837 398 MQGYYNNEEETARTIDKNG-------WLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVV 470 (544)
Q Consensus 398 ~~gy~~~~~~~~~~~~~~~-------~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 470 (544)
++||+++|+.|.+.|..++ ||+|||+|++++||++++.||.||+||++|.+|++.+||++|.++|+|.+++|+
T Consensus 3446 ~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~ 3525 (3956)
T PRK12467 3446 ARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVL 3525 (3956)
T ss_pred hhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEE
Confidence 9999999999999885544 699999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHH
Q 039837 471 SLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 538 (544)
Q Consensus 471 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~ 538 (544)
+.. ...+..++++++.........++++++++++||.|++|..++++++||+|++||++|++|++..
T Consensus 3526 ~~~-~~~~~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 3592 (3956)
T PRK12467 3526 ARD-GAGGKQLVAYVVPADPQGDWRETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRKALPDPD 3592 (3956)
T ss_pred Eec-CCCCcEEEEEEeCCCCCcccHHHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchhhcCCCC
Confidence 875 3457789999988766566778999999999999999999999999999999999999998754
No 37
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.3e-67 Score=539.45 Aligned_cols=489 Identities=26% Similarity=0.380 Sum_probs=418.7
Q ss_pred CCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCee
Q 039837 36 VTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF 115 (544)
Q Consensus 36 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 115 (544)
+|+.+.|+++|+++|+++|+++. ++.+||.||.+++.++|.+|.+.|+++|++|+++++|+.+++++++||+++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 79 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYR--DQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVF 79 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEEC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 58899999999999999999986 7899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHHhh------hhcCCCCCCCCC
Q 039837 116 SGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAA------DKAGNNFSNDDD 189 (544)
Q Consensus 116 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 189 (544)
+|+++..+.+++.++++.+++++++++.+....... ....+.++..... .+..+.... ............
T Consensus 80 v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~i~ 155 (497)
T PRK06145 80 LPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-ETPKIVIDAAAQA---DSRRLAQGGLEIPPQAAVAPTDLVRLM 155 (497)
T ss_pred EecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-ccceEEecCcccc---hhHHHhccCCCCCCCCCCCccceEEEE
Confidence 999999999999999999999999998776543321 1122222211000 011111000 011122233467
Q ss_pred CCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHH
Q 039837 190 VKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDA 269 (544)
Q Consensus 190 ~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~ 269 (544)
+||||||.||+|++||+++...+......+ +...++.++...|++|.+++....+.++..|+++++.+.+++..+++.
T Consensus 156 ~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~ 233 (497)
T PRK06145 156 YTSGTTDRPKGVMHSYGNLHWKSIDHVIAL--GLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAVLAA 233 (497)
T ss_pred eCCCCCCCCcEEEEecHHHHHHHHHHHHhh--CCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHHHHH
Confidence 899999999999999999987665555555 678889999999999999887767788999999999988999999999
Q ss_pred HHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCC
Q 039837 270 LITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGD 349 (544)
Q Consensus 270 i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 349 (544)
++++++|++.++|+++..++........++++++. +++||++++.++++.+.+.|+++++++.||+||++...+....
T Consensus 234 i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~--~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~ 311 (497)
T PRK06145 234 IERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAW--CIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEA 311 (497)
T ss_pred HHHhCCeEEEehHHHHHHHHcCCCccccccccceE--EEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccC
Confidence 99999999999999999998876555556677666 9999999999999999999988999999999999875543321
Q ss_pred CCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCC
Q 039837 350 PANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDD 429 (544)
Q Consensus 350 ~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~ 429 (544)
. ......+++|+|+++++++++| +++..++.|+.|||+++|+.++.||+++++.+...| .++||+|||+++++.+
T Consensus 312 ~---~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~ 386 (497)
T PRK06145 312 G---REIEKIGSTGRALAHVEIRIAD-GAGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAF-YGDWFRSGDVGYLDEE 386 (497)
T ss_pred c---cccccCCCcccCCCCceEEEEC-CCCCCCCCCCceEEEEECcchhhhhcCChHHHHHHH-hCCCeeccceEEEcCC
Confidence 1 1223456899999999999999 578899999999999999999999999999998888 5789999999999999
Q ss_pred CcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCC
Q 039837 430 GDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATY 509 (544)
Q Consensus 430 g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~ 509 (544)
|++++.||.+|+||++|.++++.+||+.|.++|+|.+++|++.+++..++.+++++++.+....+.+++.++++++|+++
T Consensus 387 g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~ 466 (497)
T PRK06145 387 GFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGATLTLEALDRHCRQRLASF 466 (497)
T ss_pred CcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCCCCCHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999999888888899999987766678899999999999999
Q ss_pred CceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 510 KKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 510 ~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
++|..++++++||+|++||++|++|++++.
T Consensus 467 ~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 467 KVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred CCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 999999999999999999999999998763
No 38
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.2e-66 Score=537.31 Aligned_cols=491 Identities=26% Similarity=0.392 Sum_probs=423.8
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
+.+|.+++.++| .+|+++|+.+. +++.+||+||.++++++|.+|++.|+++||+|+++++|+.+++++++||+++|++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~-~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~ 79 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETP-DGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAV 79 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeC-CCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 458899999999 99999999874 3679999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC----Cc-EEEecccccccccCHHHHHHh------hhhcCCC
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG----LP-IIVLGEERIESAINWSELIEA------ADKAGNN 183 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 183 (544)
++|+++.++..++..+++.++++++++++.....+.... .. .+.++.... ..+.+.... .......
T Consensus 80 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 156 (504)
T PRK07514 80 FLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGT---GSLLEAAAAAPDDFETVPRGAD 156 (504)
T ss_pred EEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCc---ccHHHhhhhcCcccCcccCCCC
Confidence 999999999999999999999999999987665543321 22 222222111 111111110 0011223
Q ss_pred CCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCH
Q 039837 184 FSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFEL 263 (544)
Q Consensus 184 ~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~ 263 (544)
....+.+||||||.||+|.+||+++...+......+ +...++++++.+|++|..|+...++.++..|+++++.+..++
T Consensus 157 ~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~ 234 (504)
T PRK07514 157 DLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYW--RFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKFDP 234 (504)
T ss_pred CeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHh--CCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCCCH
Confidence 344678999999999999999999999887776666 677889999999999999987788899999999999988899
Q ss_pred HHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCcccccc
Q 039837 264 RAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCI 343 (544)
Q Consensus 264 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~ 343 (544)
..+++.+ .++|++.++|+++..+++........+++++. +++||+++++++.+.|.+.+ +.++++.||+||++..
T Consensus 235 ~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~--~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~ 309 (504)
T PRK07514 235 DAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRL--FISGSAPLLAETHREFQERT-GHAILERYGMTETNMN 309 (504)
T ss_pred HHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceee--EEecCCCCCHHHHHHHHHHh-CCcceeeccccccccc
Confidence 9999998 37999999999999998876555556777777 99999999999999999988 7899999999998865
Q ss_pred ccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCce
Q 039837 344 TLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDI 423 (544)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~ 423 (544)
..... .......++|.|+++++++++|++++++++.|+.|||+++|+.++.||+++++.+...|..++||+|||+
T Consensus 310 ~~~~~-----~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl 384 (504)
T PRK07514 310 TSNPY-----DGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDL 384 (504)
T ss_pred ccCCc-----cccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecce
Confidence 43221 1233456899999999999999889999999999999999999999999999999988888899999999
Q ss_pred EEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHH
Q 039837 424 GYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVA 503 (544)
Q Consensus 424 ~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~ 503 (544)
++++++|.+++.||.+|+||++|.+++|.+||+++.++++|.+++|+++++...++.++++++..++...+.+++.+.++
T Consensus 385 ~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 464 (504)
T PRK07514 385 GKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAALDEAAILAALK 464 (504)
T ss_pred EEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998887788899999988777778899999999
Q ss_pred hcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhh
Q 039837 504 SNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 542 (544)
Q Consensus 504 ~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~ 542 (544)
++++++++|..+++++++|+|.+||++|++|+++|++.+
T Consensus 465 ~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~~ 503 (504)
T PRK07514 465 GRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADLF 503 (504)
T ss_pred hhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhhc
Confidence 999999999999999999999999999999999987653
No 39
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.9e-67 Score=550.58 Aligned_cols=498 Identities=22% Similarity=0.267 Sum_probs=404.1
Q ss_pred CCH-HHHHHhhhhhcCCceEEEEcc----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHH
Q 039837 36 VTL-PDFVLQDAELYADKVAFVEAV----SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMA 110 (544)
Q Consensus 36 ~~l-~~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~ 110 (544)
.|+ ...|+++++.+|+++|+++.. ..+.+||+||.+++.++|++|++.|+++||+|+++++|+++++++++||++
T Consensus 52 ~n~~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 131 (629)
T PRK10524 52 TNLCHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACAR 131 (629)
T ss_pred eeHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 455 556778888899999998631 236899999999999999999999999999999999999999999999999
Q ss_pred hcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchH---------HHhh---c----CCCcEEEeccccc------cccc
Q 039837 111 AGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIY---------EKVK---G----LGLPIIVLGEERI------ESAI 168 (544)
Q Consensus 111 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~---~----~~~~~~~~~~~~~------~~~~ 168 (544)
+|++++|+++.++.+++..++++++++++|+++... +.+. . ....++.++.... ....
T Consensus 132 ~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 211 (629)
T PRK10524 132 IGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPMARVAGRDV 211 (629)
T ss_pred hCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCcccCCcc
Confidence 999999999999999999999999999999875421 1111 1 1123333332110 1122
Q ss_pred CHHHHHHhhhh-------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHh-hccccCCcccCccEEEEecchhHHHH
Q 039837 169 NWSELIEAADK-------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCS-TLFSVVPEMIGQVTTLGLIPFFHIYG 240 (544)
Q Consensus 169 ~~~~~~~~~~~-------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~g 240 (544)
.+..+...... ........+.+||||||.||||+++|.+++..... ....+ ++..++++++..|+.|..+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~ 289 (629)
T PRK10524 212 DYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIF--GGKAGETFFCASDIGWVVG 289 (629)
T ss_pred cHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhc--CCCCCCEEEEcCCCCeecc
Confidence 34443322110 11233446789999999999999999987544332 33333 6678899999999999988
Q ss_pred HHHHHHhhHhccceEEEcCc----cCHHHHHHHHHHcCceeeecchHHHHHHhcCCC--CCccCccccccccEEEecCCC
Q 039837 241 ITGICCATLRNKGKVVMMNR----FELRAFLDALITHEVTFAPIVPPIILSLVKDPI--VDEFDLSKLQLRAVMTAAAPL 314 (544)
Q Consensus 241 ~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~~v~~~G~~~ 314 (544)
....++.++..|+++++.+. .++..+++.++++++|++.++|+++..|.+... ....++++++. +++||+++
T Consensus 290 ~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~--i~~~Ge~l 367 (629)
T PRK10524 290 HSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRA--LFLAGEPL 367 (629)
T ss_pred chHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeE--EEEeCCCC
Confidence 77788899999999998752 468899999999999999999999999877542 13345677777 99999999
Q ss_pred CHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEec
Q 039837 315 APDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRS 394 (544)
Q Consensus 315 ~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~ 394 (544)
++++.+++.+.+ ++++++.||+||++..+....... .......+++|+|++|++++|+|+++|++++.|+.|||+++|
T Consensus 368 ~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~-~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~g 445 (629)
T PRK10524 368 DEPTASWISEAL-GVPVIDNYWQTETGWPILAIARGV-EDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIEG 445 (629)
T ss_pred CHHHHHHHHHhc-CCCeEeccccccccchhhcCCCCc-ccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEcC
Confidence 999999999988 789999999999985433322110 112345678999999999999995589999999999999999
Q ss_pred c---cccccccCChhhhhccc---CCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceE
Q 039837 395 Q---CVMQGYYNNEEETARTI---DKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAA 468 (544)
Q Consensus 395 ~---~~~~gy~~~~~~~~~~~---~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~ 468 (544)
| +.+.|||++++.+...+ ..++||+|||+|++++||++++.||.||+||++|++|+|.+||++|.+||+|.+++
T Consensus 446 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~ 525 (629)
T PRK10524 446 PLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAVAEVA 525 (629)
T ss_pred CCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcceEE
Confidence 8 57889999998776543 14689999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCceeEEEEEeCCCCCCC--------HHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 469 VVSLPDEEAGEIPAACVVMNPNAKES--------EDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 469 v~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
|+++++...|+.+++++++.++...+ .++++++++++|+.+++|..++++++||+|.+||++|+.|++++.
T Consensus 526 vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 604 (629)
T PRK10524 526 VVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAE 604 (629)
T ss_pred EEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHc
Confidence 99999988889999999987654322 367889999999999999999999999999999999999999864
No 40
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.3e-67 Score=603.00 Aligned_cols=529 Identities=16% Similarity=0.206 Sum_probs=422.6
Q ss_pred CCCCcceeeccccccCCcceeeecCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEc-------cCCceeeHHHHHHHHH
Q 039837 2 AMPNSFSVPVPLAAAHDEEHIFRSRHPAVPVPENVTLPDFVLQDAELYADKVAFVEA-------VSGKAYTYAQVARDTR 74 (544)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~-------~~~~~~Ty~el~~~~~ 74 (544)
++|++.+.++++.++.+.+.+..............++.++|.++|+.+|+++|+++. ..++++||+||.++++
T Consensus 202 ~~p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~ 281 (1389)
T TIGR03443 202 SNPDEPIGKVSLITPSQKSLLPDPTKDLDWSGFRGAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASN 281 (1389)
T ss_pred hCcCCceecccCCCHHHHhhhhccccccCcCcccCcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHH
Confidence 588999999999887776544322111111122458999999999999999999863 1357899999999999
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccch---HHHhhc
Q 039837 75 GFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPI---YEKVKG 151 (544)
Q Consensus 75 ~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---~~~~~~ 151 (544)
++|++|.+.|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++.++++++++.... ...+..
T Consensus 282 ~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~ 361 (1389)
T TIGR03443 282 ILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRD 361 (1389)
T ss_pred HHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999986542 111110
Q ss_pred C---------CCcEEEeccc-cc-ccccCH--HHHHH-------hh--hhcCCCCCCCCCCCCCCCcCcceeeccHHHHH
Q 039837 152 L---------GLPIIVLGEE-RI-ESAINW--SELIE-------AA--DKAGNNFSNDDDVKQTDLWISKGVMLTHRNLV 209 (544)
Q Consensus 152 ~---------~~~~~~~~~~-~~-~~~~~~--~~~~~-------~~--~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~ 209 (544)
. ..+.+.+... .. ...... .+... .. ........+.+.|||||||.||||++||+++.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~ 441 (1389)
T TIGR03443 362 YIDKELELRTEIPALALQDDGSLVGGSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLA 441 (1389)
T ss_pred hhhcccccccccceEEecccccccccccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHH
Confidence 0 0111111110 00 000000 00000 00 00112334567899999999999999999999
Q ss_pred HHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc---cCHHHHHHHHHHcCceeeecchHHHH
Q 039837 210 ANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR---FELRAFLDALITHEVTFAPIVPPIIL 286 (544)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~ 286 (544)
+.+.+....+ ++...++++..+|++|..++ ..++.++..|+++++.+. .++..+.+.++++++|++.++|+++.
T Consensus 442 ~~~~~~~~~~--~~~~~d~~~~~~~~~~d~~~-~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~ 518 (1389)
T TIGR03443 442 YYFPWMAKRF--GLSENDKFTMLSGIAHDPIQ-RDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQ 518 (1389)
T ss_pred HHHHHHHHhc--CCCCCCEEEEecCceecchH-HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHH
Confidence 9988887777 77889999999999998876 678899999999999764 35788999999999999999999999
Q ss_pred HHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCC------CCCCCC
Q 039837 287 SLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPS------AGSKKN 360 (544)
Q Consensus 287 ~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~------~~~~~~ 360 (544)
.|.... ...+++++. +++||+++++.+.+++.+.+++++++|.||+||++..++......... ......
T Consensus 519 ~l~~~~---~~~~~~lr~--~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (1389)
T TIGR03443 519 LLSAQA---TTPIPSLHH--AFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVM 593 (1389)
T ss_pred HHHhcc---cccCCCccE--EEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcC
Confidence 987543 234667666 999999999999999998888999999999999987655432111100 012346
Q ss_pred cccccCCCceEEEEeCC-CCCcCCCCCCceEEEecccccccccCChhhhhcccC--------------------------
Q 039837 361 SVGFILPNLEVKFINPE-TGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTID-------------------------- 413 (544)
Q Consensus 361 ~~G~~~~~~~~~i~d~~-~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-------------------------- 413 (544)
++|+|+++++++|+|++ .+.+++.|+.|||+|+|+++++||+++|+.|.+.|.
T Consensus 594 ~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (1389)
T TIGR03443 594 PAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWL 673 (1389)
T ss_pred cCCCccCCCEEEEECCccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccC
Confidence 79999999999999953 357899999999999999999999999999988773
Q ss_pred --CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCC
Q 039837 414 --KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNA 491 (544)
Q Consensus 414 --~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 491 (544)
.++||+|||+|++++||.+++.||.||+||++|++|+|.+||++|.+||.|.+++|++.++...+..+++++++....
T Consensus 674 ~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~ 753 (1389)
T TIGR03443 674 GPRDRLYRTGDLGRYLPDGNVECCGRADDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKS 753 (1389)
T ss_pred CCccceeecCCceeEcCCCCEEEecccCCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCcc
Confidence 257999999999999999999999999999999999999999999999999999999888777778899998876221
Q ss_pred -C-------------------------CCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHH
Q 039837 492 -K-------------------------ESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 538 (544)
Q Consensus 492 -~-------------------------~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~ 538 (544)
. ...++++++++++|+.|++|..++++++||+|++||++|++|+..+
T Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~~~ 826 (1389)
T TIGR03443 754 DELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPFPD 826 (1389)
T ss_pred ccccccccccccccccccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCCCc
Confidence 1 0136788999999999999999999999999999999999997543
No 41
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3.8e-67 Score=552.47 Aligned_cols=499 Identities=20% Similarity=0.262 Sum_probs=389.2
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEc-----cCC--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHH
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEA-----VSG--KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVA 105 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~-----~~~--~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~ 105 (544)
+...|+.++|.+.++++|+++|+... ..+ +++||+||.++++++|++|.+.|+++||+|+++++|+++|++++
T Consensus 40 ~~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 119 (660)
T PLN02861 40 ADIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAM 119 (660)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 34568999999999999999999642 112 47999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC------CCc-EEEecccc----------ccccc
Q 039837 106 LGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL------GLP-IIVLGEER----------IESAI 168 (544)
Q Consensus 106 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~-~~~~~~~~----------~~~~~ 168 (544)
+||+++|+++||+++.++.+++.+++++++++++|++.+....+... .++ ++.++... .....
T Consensus 120 lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 199 (660)
T PLN02861 120 EACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCF 199 (660)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEE
Confidence 99999999999999999999999999999999999987665544221 122 22222111 01113
Q ss_pred CHHHHHHhhh------hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccC---CcccCccEEEEecchhHHH
Q 039837 169 NWSELIEAAD------KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVV---PEMIGQVTTLGLIPFFHIY 239 (544)
Q Consensus 169 ~~~~~~~~~~------~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~ 239 (544)
.++++..... .........+.+||||||.||||++||+++.+.+......+. .....++++++++|++|.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~ 279 (660)
T PLN02861 200 SWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVY 279 (660)
T ss_pred EHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHH
Confidence 4554443211 011223345789999999999999999999988766554331 0246789999999999999
Q ss_pred HHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCC---------------------------
Q 039837 240 GITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDP--------------------------- 292 (544)
Q Consensus 240 g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--------------------------- 292 (544)
++.. .+.++..|+++++.. .++..+++.|+++++|+++++|+++..|.+..
T Consensus 280 ~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~ 357 (660)
T PLN02861 280 DQVI-ETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLR 357 (660)
T ss_pred HHHH-HHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHh
Confidence 9854 455899999998874 58899999999999999999999999886410
Q ss_pred ----------CCCccC-------c-cccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCC
Q 039837 293 ----------IVDEFD-------L-SKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPS 354 (544)
Q Consensus 293 ----------~~~~~~-------~-~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~ 354 (544)
...... + +++|+ +++||+++++++. +|.+.++...+++.||+||+++.++... ..
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~--~~~Ggapl~~~~~-~~~~~~~~~~l~~~YG~TE~~~~~~~~~----~~ 430 (660)
T PLN02861 358 KGLKQEEASPRLDRLVFDKIKEGLGGRVRL--LLSGAAPLPRHVE-EFLRVTSCSVLSQGYGLTESCGGCFTSI----AN 430 (660)
T ss_pred cCCCCcCccHhHHHHHHHHHHHHhCCcEEE--EEECCCCCCHHHH-HHHHHHcCCCeeEecchhhhhhceeecc----cc
Confidence 000000 1 24445 9999999999975 5666664457999999999976554332 11
Q ss_pred CCCCCCcccccCCCceEEEEe-CCCC-CcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcE
Q 039837 355 AGSKKNSVGFILPNLEVKFIN-PETG-KSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDI 432 (544)
Q Consensus 355 ~~~~~~~~G~~~~~~~~~i~d-~~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~ 432 (544)
.....+++|+|+++++++|+| ++.| ..++.+..|||+++||+++.|||++|+.|.+.| .+|||+|||+|++|+||++
T Consensus 431 ~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l 509 (660)
T PLN02861 431 VFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVL-IDGWFHTGDIGEWQPNGAM 509 (660)
T ss_pred cCCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhh-hccCcccCceEEECCCCcE
Confidence 123467999999999999998 3334 344566789999999999999999999999999 5899999999999999999
Q ss_pred EEEeecCCceee-cceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCC--------C--CCCH------
Q 039837 433 FIVDRIKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPN--------A--KESE------ 495 (544)
Q Consensus 433 ~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--------~--~~~~------ 495 (544)
++.||.||+||+ +|++|+|.+||++|.+||.|.+++|++.+. +..++|++++... . ..+.
T Consensus 510 ~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~---~~~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~ 586 (660)
T PLN02861 510 KIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSF---ESFLVAVVVPDRQALEDWAANNNKTGDFKSLCKN 586 (660)
T ss_pred EEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCC---cceeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcC
Confidence 999999999997 799999999999999999999999998762 3578899887532 0 0111
Q ss_pred ----HHHHHHHHh-----cccCCCceeEEEEee-cC-----CCCCCcccchHHHHHHHHHhhhC
Q 039837 496 ----DDIMDFVAS-----NVATYKKVRVLHFVD-GI-----PKSHSGKIMRRILKDKMLEKMRK 544 (544)
Q Consensus 496 ----~~l~~~l~~-----~l~~~~~p~~~~~~~-~~-----P~t~~GKi~r~~l~~~~~~~~~~ 544 (544)
..+.+.+++ .++.+.++..+...+ .| .+|+++|++|+.+.+.|+++|++
T Consensus 587 ~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I~~ 650 (660)
T PLN02861 587 LKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCIDQ 650 (660)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHHHH
Confidence 123333432 478899999888864 56 89999999999999999999863
No 42
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=2.1e-66 Score=537.19 Aligned_cols=487 Identities=24% Similarity=0.357 Sum_probs=410.8
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
..|+.++|+++|+.+|+++|+++. ++.+||+||.++++++|.+|.+.|+++||+|+++++|+.+++++++||+++|++
T Consensus 22 ~~~l~~~~~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~ 99 (527)
T TIGR02275 22 DKPLTDILRDQAARYPDAIAIICG--NRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIA 99 (527)
T ss_pred CCcHHHHHHHHHHHCCCceEEEeC--CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeE
Confidence 458999999999999999999986 789999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccchH--------HHhhcC--CCcEEEecccccccccCHHHHHHhh------h
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPIY--------EKVKGL--GLPIIVLGEERIESAINWSELIEAA------D 178 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~--------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~------~ 178 (544)
++++++..+.+++.++++.+++++++++.... ..+... ....+.+..... ............ .
T Consensus 100 ~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 178 (527)
T TIGR02275 100 PVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTR-VEAELFLWLESPAEPVKFP 178 (527)
T ss_pred EeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCC-CcchhhHHhhCcCccccCC
Confidence 99999999999999999999999999986531 111111 112222211110 000011111100 0
Q ss_pred hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHH-HHHhhHhccceEEE
Q 039837 179 KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITG-ICCATLRNKGKVVM 257 (544)
Q Consensus 179 ~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~ 257 (544)
...........+||||||.||||++||+++..++......+ ....+++++..+|++|.+++.. .++.++..|+++++
T Consensus 179 ~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~--~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~ 256 (527)
T TIGR02275 179 PTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC--WLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVL 256 (527)
T ss_pred CCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc--CCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEE
Confidence 11122334567899999999999999999998887776665 6788999999999999998754 47888999999999
Q ss_pred cCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccC
Q 039837 258 MNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGL 337 (544)
Q Consensus 258 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 337 (544)
.+..++..+++.++++++|++.++|+++..|++........+++++. +++||+++++++.+++.+.+ ++++++.||+
T Consensus 257 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~--~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~ 333 (527)
T TIGR02275 257 APDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKL--LQVGGAKFSEAAARRVPAVF-GCQLQQVFGM 333 (527)
T ss_pred CCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEE--EEEcCCCCCHHHHHHHHHHh-CCeEEeeecc
Confidence 88889999999999999999999999999998876655566677777 99999999999999999988 8999999999
Q ss_pred ccccccccccCCCCCCCCCCCCCcccccC-CCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCC
Q 039837 338 TEHSCITLTYGDPANPSAGSKKNSVGFIL-PNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNG 416 (544)
Q Consensus 338 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~ 416 (544)
||++....... .......+++|+|+ ++..++++| +++++++.|+.|||+++|+.++.||+++++.+...++.+|
T Consensus 334 tE~~~~~~~~~----~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg 408 (527)
T TIGR02275 334 AEGLVNYTRLD----DPAEIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEG 408 (527)
T ss_pred CccCccccCCC----CccccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchhhcCChhHhHhhcCcCC
Confidence 99653332211 11223456789999 588999999 6789999999999999999999999999999999898899
Q ss_pred eeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHH
Q 039837 417 WLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESED 496 (544)
Q Consensus 417 ~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~ 496 (544)
||+|||+|+++++|++++.||.+|+|+++|.+++|.+||++|.++|+|.+++|++.++...++.+++++++.++ ..+..
T Consensus 409 ~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~-~~~~~ 487 (527)
T TIGR02275 409 FYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDP-ALKAA 487 (527)
T ss_pred CEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCC-CCCHH
Confidence 99999999999999999999999999999999999999999999999999999999998888899999987654 46788
Q ss_pred HHHHHHHhc-ccCCCceeEEEEeecCCCCCCcccchHHHH
Q 039837 497 DIMDFVASN-VATYKKVRVLHFVDGIPKSHSGKIMRRILK 535 (544)
Q Consensus 497 ~l~~~l~~~-l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~ 535 (544)
++.++++++ ++.+++|..++++++||+|.+||++|++|+
T Consensus 488 ~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 488 QLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred HHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 999999985 999999999999999999999999999874
No 43
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-66 Score=537.49 Aligned_cols=498 Identities=32% Similarity=0.501 Sum_probs=429.6
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhc
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAG 112 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G 112 (544)
+.+.++.++|.+.++.+|+++|+.+. ++.+||+||+++++++|++|.+.|+++|++|+++++|+.+++++++||+++|
T Consensus 3 ~~~~~l~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G 80 (521)
T PRK06187 3 DYPLTIGRILRHGARKHPDKEAVYFD--GRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIG 80 (521)
T ss_pred cccCCHHHHHHHHHHHCCCceEEEeC--CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 34679999999999999999999987 6779999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----C-cEEEeccccc----ccccCHHHHHHhhhhc--
Q 039837 113 GVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----L-PIIVLGEERI----ESAINWSELIEAADKA-- 180 (544)
Q Consensus 113 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~-~~~~~~~~~~----~~~~~~~~~~~~~~~~-- 180 (544)
++++++++.++.+++..+++.+++++++++.+..+.+.... . ..+..++... .....+.++.......
T Consensus 81 ~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (521)
T PRK06187 81 AVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLAAASDTFD 160 (521)
T ss_pred eEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHhhcCCccCC
Confidence 99999999999999999999999999999988766654432 1 2233322211 2233444443321111
Q ss_pred ----CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEE
Q 039837 181 ----GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVV 256 (544)
Q Consensus 181 ----~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~ 256 (544)
.........+||||||.||+|.+||+++.+........+ ++..+++++..+|++|.+++...+ .++..|++++
T Consensus 161 ~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~-~~l~~G~~~v 237 (521)
T PRK06187 161 FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWL--KLSRDDVYLVIVPMFHVHAWGLPY-LALMAGAKQV 237 (521)
T ss_pred CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhh--CCCCCCEEEEeCCchHHhhHHHHH-HHHHhCCEEE
Confidence 112234567899999999999999999998888777766 788999999999999999885444 4999999999
Q ss_pred EcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEeccc
Q 039837 257 MMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYG 336 (544)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 336 (544)
+.+..++..+++.++++++|+++++|+++..|.+........+++++. +++||+++++++++.|.+.| ++++++.||
T Consensus 238 ~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~--v~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG 314 (521)
T PRK06187 238 IPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRL--VIYGGAALPPALLREFKEKF-GIDLVQGYG 314 (521)
T ss_pred ecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhE--EEEcCcCCCHHHHHHHHHHh-Ccchheeec
Confidence 998889999999999999999999999999999887765666777777 99999999999999999999 899999999
Q ss_pred CccccccccccCCCCCC-CCCCCCCcccccCCCceEEEEeCCCCCcCCC--CCCceEEEecccccccccCChhhhhcccC
Q 039837 337 LTEHSCITLTYGDPANP-SAGSKKNSVGFILPNLEVKFINPETGKSLPS--NTPGELCVRSQCVMQGYYNNEEETARTID 413 (544)
Q Consensus 337 ~tE~~~~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~--g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 413 (544)
+||+|.+.......... .......++|.|++++.++|+| +++.+++. |+.|||+++|+.++.||+++++.+...|
T Consensus 315 ~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~- 392 (521)
T PRK06187 315 MTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETI- 392 (521)
T ss_pred cCccCcccccCCcccccccccccCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHh-
Confidence 99998766554311100 0013667899999999999999 56888888 9999999999999999999999998888
Q ss_pred CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCC
Q 039837 414 KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKE 493 (544)
Q Consensus 414 ~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 493 (544)
.++||+|||+++++++|.+++.||.+|+++++|.++++.+||++|.++++|.+++|++.+++..++.+++++++.++...
T Consensus 393 ~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 472 (521)
T PRK06187 393 DGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGATL 472 (521)
T ss_pred hCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECCCCCC
Confidence 56799999999999999999999999999999999999999999999999999999999888888899999998887777
Q ss_pred CHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 494 SEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 494 ~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
+.+++.++++++++++.+|..++++++||+|++||++|+.|+++|++
T Consensus 473 ~~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~ 519 (521)
T PRK06187 473 DAKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAE 519 (521)
T ss_pred CHHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhc
Confidence 88999999999999999999999999999999999999999999975
No 44
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.5e-67 Score=541.62 Aligned_cols=499 Identities=22% Similarity=0.297 Sum_probs=394.8
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
..|+.+.|.++|+++|+++|+++..+++.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 13 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v 92 (540)
T PRK05857 13 PSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAI 92 (540)
T ss_pred CcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeE
Confidence 44789999999999999999986544568999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC-----CCcEEEecccccccc--cCHHHHHH-hhhhcCCCCCC
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL-----GLPIIVLGEERIESA--INWSELIE-AADKAGNNFSN 186 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~ 186 (544)
++|++++++.+++.++++.++++++++++......... ..+.+.++....... ........ ...........
T Consensus 93 ~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 172 (540)
T PRK05857 93 AVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDAASLAGNADQGSEDPL 172 (540)
T ss_pred EEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecccccccccccccccccccccCCCCCCeE
Confidence 99999999999999999999999999987653221111 122333321110000 00000000 00111222334
Q ss_pred CCCCCCCCCcCcceeeccHHHHHHHHHhhccc-c-CCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHH
Q 039837 187 DDDVKQTDLWISKGVMLTHRNLVANLCSTLFS-V-VPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELR 264 (544)
Q Consensus 187 ~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~ 264 (544)
...+||||||.||||.+||+++.++....... . ......+++.+..+|++|.+++. ..+.++..|+++++ .+.++.
T Consensus 173 ~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~-~~~~~l~~G~~~v~-~~~~~~ 250 (540)
T PRK05857 173 AMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW-WILTCLMHGGLCVT-GGENTT 250 (540)
T ss_pred EEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHH-HHHHHhhcceeEEe-cCCChh
Confidence 67899999999999999999998765433211 0 01445678899999999999884 56778889998776 446788
Q ss_pred HHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccc
Q 039837 265 AFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCIT 344 (544)
Q Consensus 265 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~ 344 (544)
.+++.++++++|+++++|+++..|++.......++++++. +++||++++....+ +.+.+ ++++++.||+||++...
T Consensus 251 ~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~--~~~gG~~~~~~~~~-~~~~~-g~~i~~~YG~TE~~~~~ 326 (540)
T PRK05857 251 SLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRL--VGYGGSRAIAADVR-FIEAT-GVRTAQVYGLSETGCTA 326 (540)
T ss_pred HHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceE--EEEcCccCCchhHH-HHHHh-CCeeecccCCCcCCcee
Confidence 9999999999999999999999998876555566777777 99999999987775 55566 89999999999998644
Q ss_pred cccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcC-----CCCCCceEEEecccccccccCChhhhhcccCCCCeee
Q 039837 345 LTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSL-----PSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLH 419 (544)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~-----~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~ 419 (544)
.............+.+++|+|++|++++|+|++...++ +.|+.|||+++|+.++.|||++++.+.+.| .+|||+
T Consensus 327 ~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~-~~g~~~ 405 (540)
T PRK05857 327 LCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL-IDGWVN 405 (540)
T ss_pred eecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhc-CCCcee
Confidence 33221111101234578999999999999995333233 457899999999999999999999998888 689999
Q ss_pred cCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCC-CHHH-
Q 039837 420 TGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKE-SEDD- 497 (544)
Q Consensus 420 TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-~~~~- 497 (544)
|||+|+++++|++++.||.+|+||++|.+|+|.+||++|..||+|.+++|++.++...++.++++++..+..+. ..++
T Consensus 406 TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~l 485 (540)
T PRK05857 406 TGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAVVASAELDESAARAL 485 (540)
T ss_pred ccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEEEEEeCCCCChhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999988777788888776543221 1233
Q ss_pred ---HHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 498 ---IMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 498 ---l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
+.+.+++.++++++|..++++++||+|++||++|++|++.+.+
T Consensus 486 ~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~ 531 (540)
T PRK05857 486 KHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATA 531 (540)
T ss_pred HHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhh
Confidence 4445567799999999999999999999999999999998864
No 45
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=3.7e-66 Score=538.21 Aligned_cols=498 Identities=26% Similarity=0.398 Sum_probs=418.5
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
..|+.++|++.++.+|+++|+++. +++++||+||++++.++|++|++.|+++||+|+++++|+++++++++||+++|++
T Consensus 22 ~~~l~~~~~~~~~~~pd~~a~~~~-~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 100 (547)
T PRK06087 22 DASLADYWQQTARAMPDKIAVVDN-HGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAV 100 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEcC-CCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 357999999999999999999875 3579999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccch-----HHHhh----cC-CC-cEEEecccc-cccccCHHHHHHhhh----
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPI-----YEKVK----GL-GL-PIIVLGEER-IESAINWSELIEAAD---- 178 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~----~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~~---- 178 (544)
++|+++.++.+++..+++.+++++++++... .+.+. .. .. .++.++... ......+..+.....
T Consensus 101 ~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (547)
T PRK06087 101 SVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADYEPLTT 180 (547)
T ss_pred EeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccCCcccC
Confidence 9999999999999999999999999997532 11111 11 11 222222111 111123333322111
Q ss_pred --hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEE
Q 039837 179 --KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVV 256 (544)
Q Consensus 179 --~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~ 256 (544)
.........+.+||||||.||+|++||+++..........+ ++.++++++..+|++|.+|+...++.++..|++++
T Consensus 181 ~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~ 258 (547)
T PRK06087 181 AITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARL--NLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSV 258 (547)
T ss_pred CCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc--CCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEE
Confidence 01112233567899999999999999999988877766655 67889999999999999998788899999999999
Q ss_pred EcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEeccc
Q 039837 257 MMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYG 336 (544)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 336 (544)
+.+.+++..+++.++++++++++++|+++..+++........+++++. +++||+++++++.+.+.+. ++++++.||
T Consensus 259 ~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~--i~~gG~~~~~~~~~~~~~~--~~~l~~~YG 334 (547)
T PRK06087 259 LLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRF--FLCGGTTIPKKVARECQQR--GIKLLSVYG 334 (547)
T ss_pred ecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEE--EEEcCCCCCHHHHHHHHHc--CCcEEEEec
Confidence 999899999999999999999999888888887765544556677777 9999999999999988764 899999999
Q ss_pred CccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCC
Q 039837 337 LTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNG 416 (544)
Q Consensus 337 ~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~ 416 (544)
+||++.+...... ........++|.|++++.++++| +++.+++.|+.|||+++|+.++.||+++++.+...++.++
T Consensus 335 ~TE~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g 410 (547)
T PRK06087 335 STESSPHAVVNLD---DPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEG 410 (547)
T ss_pred ccccCCccccCCC---cchhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEecccccccccCCHHHHHHHhCCCC
Confidence 9999876654321 10122345789999999999999 6889999999999999999999999999999988887889
Q ss_pred eeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCC-CCCCCH
Q 039837 417 WLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNP-NAKESE 495 (544)
Q Consensus 417 ~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~-~~~~~~ 495 (544)
||+|||+++++++|.+++.||.+|+|+.+|.+++|.+||++|.++|+|.++++++.+++..|+.++++++..+ ....+.
T Consensus 411 ~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~ 490 (547)
T PRK06087 411 WYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLTL 490 (547)
T ss_pred CcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999999998888899999998875 344567
Q ss_pred HHHHHHHH-hcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhhh
Q 039837 496 DDIMDFVA-SNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKMR 543 (544)
Q Consensus 496 ~~l~~~l~-~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~~ 543 (544)
+++.+++. +.++.+++|..++++++||+|.+||++|++|++++.+++.
T Consensus 491 ~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~~ 539 (547)
T PRK06087 491 EEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRLT 539 (547)
T ss_pred HHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHhh
Confidence 88888875 5799999999999999999999999999999999988763
No 46
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.6e-66 Score=540.39 Aligned_cols=494 Identities=26% Similarity=0.399 Sum_probs=397.5
Q ss_pred CCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCee
Q 039837 36 VTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF 115 (544)
Q Consensus 36 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 115 (544)
.|+.++|.++|+.+|+++|+.+. +.++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 14 ~~~~~~l~~~~~~~p~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~ 91 (579)
T PLN03102 14 LTPITFLKRASECYPNRTSIIYG--KTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVL 91 (579)
T ss_pred ccHHHHHHHHHHhCCCCeEEEEC--CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEE
Confidence 47899999999999999999986 6899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC-----------CCcEEEeccccc-----ccccCHHHHHHhhhh
Q 039837 116 SGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL-----------GLPIIVLGEERI-----ESAINWSELIEAADK 179 (544)
Q Consensus 116 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 179 (544)
+|+++.++.+++.++++.++++++|++++..+.+.+. .++++.++.... .....+.++......
T Consensus 92 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (579)
T PLN03102 92 NPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLIQRGEP 171 (579)
T ss_pred eeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHHhccCC
Confidence 9999999999999999999999999987765544321 123444432111 012234443322111
Q ss_pred -----------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhh
Q 039837 180 -----------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCAT 248 (544)
Q Consensus 180 -----------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~ 248 (544)
........+.+||||||.||+|++||+++..........+ .+...++++..+|++|..++. ..+.+
T Consensus 172 ~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~--~~~~~~~~l~~~pl~h~~g~~-~~~~~ 248 (579)
T PLN03102 172 TPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGW--EMGTCPVYLWTLPMFHCNGWT-FTWGT 248 (579)
T ss_pred CCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhc--CCCCCCeEEecCChhhhcchh-HHHHH
Confidence 0112334567899999999999999999765544333333 556677889999999998874 45667
Q ss_pred HhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCC
Q 039837 249 LRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPG 328 (544)
Q Consensus 249 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~ 328 (544)
+..|+++++...+++..+++.|+++++|++.++|+++..|.+.........++++. +++||+++++.+.+++.+ + +
T Consensus 249 ~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~--~~~gg~~~~~~~~~~~~~-~-g 324 (579)
T PLN03102 249 AARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVH--VLTGGSPPPAALVKKVQR-L-G 324 (579)
T ss_pred HHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceE--EEECCCCCCHHHHHHHHH-c-C
Confidence 88899988888888899999999999999999999999998865433333344444 999999999999999876 5 8
Q ss_pred CeEEecccCccccccccccCCCCC----CC-----CCCCCCcccccCCCceEEEEeCCCCCcCCC--CCCceEEEecccc
Q 039837 329 VQVQEAYGLTEHSCITLTYGDPAN----PS-----AGSKKNSVGFILPNLEVKFINPETGKSLPS--NTPGELCVRSQCV 397 (544)
Q Consensus 329 ~~i~~~yG~tE~~~~~~~~~~~~~----~~-----~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~--g~~Gel~v~~~~~ 397 (544)
+++++.||+||+++.++....... +. .....+..+.++++ ++++|.+.+++++. ++.|||+++|+.+
T Consensus 325 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--v~i~~~~~~~~v~~~~~~~GEl~v~g~~~ 402 (579)
T PLN03102 325 FQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLAD--VDVKNKETQESVPRDGKTMGEIVIKGSSI 402 (579)
T ss_pred CeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccc--eEEeccccccccCCCCCCceEEEEECcch
Confidence 899999999999865433211000 00 00112333444444 45666556777764 3679999999999
Q ss_pred cccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCC
Q 039837 398 MQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEA 477 (544)
Q Consensus 398 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 477 (544)
+.|||++++.+...| .+|||+|||+|++|+||++++.||.+|+|+++|++|+|.+||++|.++|.|.+++|++++++..
T Consensus 403 ~~GY~~~~~~t~~~f-~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~ 481 (579)
T PLN03102 403 MKGYLKNPKATSEAF-KHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVAMPHPTW 481 (579)
T ss_pred hhhhcCChhhhHhhh-ccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEeccCccc
Confidence 999999999999888 6799999999999999999999999999999999999999999999999999999999999888
Q ss_pred CceeEEEEEeCCCCCC----------CHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 478 GEIPAACVVMNPNAKE----------SEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 478 ~~~~~~~v~~~~~~~~----------~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
++.+++++++.++... +..+++++++++|++|++|..++++++||+|++||++|++|++++.+.
T Consensus 482 ~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~~ 555 (579)
T PLN03102 482 GETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKGL 555 (579)
T ss_pred cceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHHh
Confidence 8899999988765432 356899999999999999999999999999999999999999987653
No 47
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.8e-66 Score=536.08 Aligned_cols=500 Identities=26% Similarity=0.394 Sum_probs=422.7
Q ss_pred CCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHH
Q 039837 29 AVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGI 108 (544)
Q Consensus 29 ~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~ 108 (544)
+......+|+.+.+..+|+.+|+++|+.+. ++.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||
T Consensus 10 ~~~~~~~~n~~~~~~~~a~~~~~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~ 87 (542)
T PRK07786 10 QPYLARRQNWVNQLARHALMQPDAPALRFL--GNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAA 87 (542)
T ss_pred CCCcccccCHHHHHHHHHHHCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 334566789999999999999999999986 679999999999999999999999999999999999999999999999
Q ss_pred HHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----Cc-EEEecccccccccCHHHHHHhhhhc--
Q 039837 109 MAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----LP-IIVLGEERIESAINWSELIEAADKA-- 180 (544)
Q Consensus 109 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~-- 180 (544)
+++|++++|+++..+.+++..+++.+++++++++......+.... .. .+..++........+.++.......
T Consensus 88 ~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (542)
T PRK07786 88 NMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEAGPAHA 167 (542)
T ss_pred HHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhccCCCCC
Confidence 999999999999999999999999999999999877655443221 22 2222221222234455443321111
Q ss_pred ----CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcc-cCccEEEEecchhHHHHHHHHHHhhHhccceE
Q 039837 181 ----GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEM-IGQVTTLGLIPFFHIYGITGICCATLRNKGKV 255 (544)
Q Consensus 181 ----~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~ 255 (544)
.........+||||||.||+|.+||+++...+......+ +. ...++++...|++|.+|+ ..++.++..|+++
T Consensus 168 ~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~ 244 (542)
T PRK07786 168 PVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTN--GADINSDVGFVGVPLFHIAGI-GSMLPGLLLGAPT 244 (542)
T ss_pred CCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhc--CCCCCCceEEEecchHHHHHH-HHHHHHHHccCEE
Confidence 111233567899999999999999999998887766655 44 567899999999999988 6788899999999
Q ss_pred EEcC--ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEe
Q 039837 256 VMMN--RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQE 333 (544)
Q Consensus 256 ~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 333 (544)
++.+ .+++..+++.++++++|++.++|+++..|++........ +.+|.+++||+++++++++.+.+.|++.++++
T Consensus 245 v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~---~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~ 321 (542)
T PRK07786 245 VIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD---LALRVLSWGAAPASDTLLRQMAATFPEAQILA 321 (542)
T ss_pred EEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC---cceEEEEECCCCCCHHHHHHHHHHcCCCeEEe
Confidence 9865 568999999999999999999999999998765433222 23445999999999999999999999999999
Q ss_pred cccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccC
Q 039837 334 AYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTID 413 (544)
Q Consensus 334 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 413 (544)
.||+||++.+.+.... .......+++|+|++++.++|+| +++..++.|+.|||+++|+.++.||+++++.+...|
T Consensus 322 ~YG~tE~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f- 396 (542)
T PRK07786 322 AFGQTEMSPVTCMLLG---EDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAF- 396 (542)
T ss_pred eecccccccceEecCc---ccccccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHh-
Confidence 9999999876543321 11223457899999999999999 678999999999999999999999999999998888
Q ss_pred CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCC-C
Q 039837 414 KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNA-K 492 (544)
Q Consensus 414 ~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~ 492 (544)
.++||+|||+++++++|.+++.||.+|+|+++|.++++.+||++|+++|.|.+++|++.+++..++.+++++++.+.. .
T Consensus 397 ~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 476 (542)
T PRK07786 397 AGGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDAA 476 (542)
T ss_pred hCCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCCC
Confidence 579999999999999999999999999999999999999999999999999999999998877788888888877643 3
Q ss_pred CCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 493 ESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 493 ~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
...+++.++++++++++++|..++++++||+|++||++|++|+++|.+.
T Consensus 477 ~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 525 (542)
T PRK07786 477 LTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGAC 525 (542)
T ss_pred CCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhh
Confidence 5678999999999999999999999999999999999999999999765
No 48
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-66 Score=536.62 Aligned_cols=497 Identities=26% Similarity=0.434 Sum_probs=415.3
Q ss_pred CCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 34 ENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 34 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
..+|+.+++.+.|+++|+++|+.+. ++++||+||.+++.++|..|++.|+++||+|+++++|+++++++++||+++|+
T Consensus 5 ~~~~~~~~~~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~ 82 (528)
T PRK07470 5 RVMNLAHFLRQAARRFPDRIALVWG--DRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGA 82 (528)
T ss_pred cCCCHHHHHHHHHHHCCCceEEEEC--CccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCe
Confidence 4678999999999999999999986 68999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC---C---CcEEEecccccccccCHHHHHHhhh-------hc
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL---G---LPIIVLGEERIESAINWSELIEAAD-------KA 180 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 180 (544)
+++++++.++.+++.++++.++++.++++.+..+..... . ...+.+... .....+..+..... ..
T Consensus 83 ~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 160 (528)
T PRK07470 83 VWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGA--RAGLDYEALVARHLGARVANAAV 160 (528)
T ss_pred EEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCC--cccccHHHHHhcCCCCCCCcccC
Confidence 999999999999999999999999999998765443221 1 122222211 11233444433210 01
Q ss_pred CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-
Q 039837 181 GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN- 259 (544)
Q Consensus 181 ~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~- 259 (544)
.......+.+||||||.||+|++||+++...+......+..+....++++..+|++|.+++. .++ .+..|++.++.+
T Consensus 161 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~-~~~~g~~~~~~~~ 238 (528)
T PRK07470 161 DHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIH-QLC-QVARGAATVLLPS 238 (528)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHH-HHH-HHhcCceEEEecc
Confidence 12234457889999999999999999997655443332222457788999999999998874 344 566677766654
Q ss_pred -ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCc
Q 039837 260 -RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLT 338 (544)
Q Consensus 260 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 338 (544)
.+++..+++.++++++|++.++|+++..+.+........+++++. +++||+++++.+.+++.+.+ +..+++.||+|
T Consensus 239 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~--~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~T 315 (528)
T PRK07470 239 ERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRY--VIYAGAPMYRADQKRALAKL-GKVLVQYFGLG 315 (528)
T ss_pred cCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEE--EEEcCCCCCHHHHHHHHHHh-CcHHHHhCCCc
Confidence 468999999999999999999999999998876655566777776 99999999999999998888 78899999999
Q ss_pred cccccccccCCC--C-CCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCC
Q 039837 339 EHSCITLTYGDP--A-NPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKN 415 (544)
Q Consensus 339 E~~~~~~~~~~~--~-~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 415 (544)
|++..+...... . ........+++|.|+++++++++| +++.+++.|+.|||+++|+.++.||+++++.+...| .+
T Consensus 316 E~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~-~~ 393 (528)
T PRK07470 316 EVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAGYYNNPEANAKAF-RD 393 (528)
T ss_pred ccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhh-cC
Confidence 998765443210 0 000123457889999999999999 578999999999999999999999999999998877 68
Q ss_pred CeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCH
Q 039837 416 GWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESE 495 (544)
Q Consensus 416 ~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 495 (544)
+||+|||+++++++|++++.||.+|++|++|.+++|.+||+.|.+++.|.+++|++.++...++.++++++..++...+.
T Consensus 394 ~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (528)
T PRK07470 394 GWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGAPVDE 473 (528)
T ss_pred CcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999998887888888888877666788
Q ss_pred HHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 496 DDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 496 ~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
+++.+++++.|+++++|..++++++||+|++||++|+.|+++|+++
T Consensus 474 ~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 519 (528)
T PRK07470 474 AELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEER 519 (528)
T ss_pred HHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999998764
No 49
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.9e-66 Score=530.64 Aligned_cols=474 Identities=28% Similarity=0.423 Sum_probs=406.8
Q ss_pred CCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCee
Q 039837 36 VTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF 115 (544)
Q Consensus 36 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 115 (544)
+|+.+.|.++|.++|+++|+.+. ++.+||+||.++++++|++|.+.|+++||+|+++++|+.++++++|||+++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 79 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFE--EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVA 79 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEE
Confidence 68999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHHhh-------hhcCCCCCCCC
Q 039837 116 SGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAA-------DKAGNNFSNDD 188 (544)
Q Consensus 116 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 188 (544)
+|+++..+.+++..++++++++.++++............ ..++++.... ...........
T Consensus 80 v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i 146 (483)
T PRK03640 80 VLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS-------------VKFAELMNGPKEEAEIQEEFDLDEVATI 146 (483)
T ss_pred EecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc-------------ccHHHHhhcccccCCCCCCCCCCCeEEE
Confidence 999999999999999999999999998765544322110 0011111110 01112233356
Q ss_pred CCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHH
Q 039837 189 DVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLD 268 (544)
Q Consensus 189 ~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 268 (544)
.+||||||.||+|++||+++...+......+ ++..+++++..+|++|.+++ ..++.++..|+++++.+..++..+++
T Consensus 147 ~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~ 223 (483)
T PRK03640 147 MYTSGTTGKPKGVIQTYGNHWWSAVGSALNL--GLTEDDCWLAAVPIFHISGL-SILMRSVIYGMRVVLVEKFDAEKINK 223 (483)
T ss_pred EeCCCcCCCCcEEEEecHHHHHHHHHHHHhc--CCCcCcEEEEecCHHHHHHH-HHHHHHHhcCCEEEecCCCCHHHHHH
Confidence 7899999999999999999988776666555 77899999999999999988 45788899999999999889999999
Q ss_pred HHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccC
Q 039837 269 ALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYG 348 (544)
Q Consensus 269 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 348 (544)
.++++++|++.++|+++..|++..... ....+++. +++||+++++.+.+.+.+. ++++++.||+||++..+....
T Consensus 224 ~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~--~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~ 298 (483)
T PRK03640 224 LLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRC--MLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIVTLS 298 (483)
T ss_pred HHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceE--EEEcCCCCCHHHHHHHHHh--CCCeeeeeccCcccccccccC
Confidence 999999999999999999998754322 22345555 9999999999999998875 899999999999876543322
Q ss_pred CCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcC
Q 039837 349 DPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDD 428 (544)
Q Consensus 349 ~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~ 428 (544)
. .......+++|+|++++++++.|+ +.+++.|+.|||+++|+.++.||+++++.+...| .++||+|||++++++
T Consensus 299 ~---~~~~~~~~~vG~p~~~~~~~i~~~--~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~-~~~~~~tGDl~~~~~ 372 (483)
T PRK03640 299 P---EDALTKLGSAGKPLFPCELKIEKD--GVVVPPFEEGEIVVKGPNVTKGYLNREDATRETF-QDGWFKTGDIGYLDE 372 (483)
T ss_pred c---ccccccCCCcccccCCcEEEEecC--CCcCCCCCceEEEEECcchhhhhcCCHHHHHHHH-hcCCeeccceEEEcC
Confidence 1 112345678999999999999883 4789999999999999999999999999998888 689999999999999
Q ss_pred CCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccC
Q 039837 429 DGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVAT 508 (544)
Q Consensus 429 ~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~ 508 (544)
||.+++.||.+|++|.+|.++++.+||+.+.++++|.++++++.+++..+..++++++.. ...+.+++.+++++.|++
T Consensus 373 ~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~l~~ 450 (483)
T PRK03640 373 EGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKS--GEVTEEELRHFCEEKLAK 450 (483)
T ss_pred CCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeC--CCCCHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999998887777888877743 456788999999999999
Q ss_pred CCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 509 YKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 509 ~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
+++|..+++++++|+|++||++|++|++++++
T Consensus 451 ~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 451 YKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred CCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 99999999999999999999999999999864
No 50
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-66 Score=545.15 Aligned_cols=499 Identities=18% Similarity=0.253 Sum_probs=390.5
Q ss_pred CCCCCCHHHHHHhhhhhcCCceEEEEccCC---ceeeHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEE
Q 039837 32 VPENVTLPDFVLQDAELYADKVAFVEAVSG---KAYTYAQVARDTRGFAKALRSL---GLRKG-----------QVVIVV 94 (544)
Q Consensus 32 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~~L~~~---Gi~~g-----------d~V~i~ 94 (544)
.....|+.++|.++++++|+++|+++...+ +.+||+||.+++.++|++|.+. |+++| |+|+|+
T Consensus 57 ~~~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~ 136 (746)
T PTZ00342 57 LYVYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLY 136 (746)
T ss_pred ccccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEE
Confidence 344679999999999999999999864222 6899999999999999999974 99999 999999
Q ss_pred cCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC-----CCc-EEEecccccc---
Q 039837 95 LPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL-----GLP-IIVLGEERIE--- 165 (544)
Q Consensus 95 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~~~~~--- 165 (544)
++|+++|+++.+||+++|++.||+++.++.+++.++++++++++++++.+..+.+... .++ ++.++.....
T Consensus 137 ~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~ 216 (746)
T PTZ00342 137 GSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEI 216 (746)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccccc
Confidence 9999999999999999999999999999999999999999999999987766655432 122 3334321100
Q ss_pred ----------------cc-------------------------------cC-----------------HHHHHHhh----
Q 039837 166 ----------------SA-------------------------------IN-----------------WSELIEAA---- 177 (544)
Q Consensus 166 ----------------~~-------------------------------~~-----------------~~~~~~~~---- 177 (544)
.. .. ++++....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (746)
T PTZ00342 217 NINKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTNY 296 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccCC
Confidence 00 00 11111100
Q ss_pred --hhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceE
Q 039837 178 --DKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKV 255 (544)
Q Consensus 178 --~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~ 255 (544)
........+.+.+||||||.||||++||+++.+.+..............+++++.+|++|++++. ..+.++..|+++
T Consensus 297 ~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~-~~~~~l~~G~~i 375 (746)
T PTZ00342 297 KIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERV-IAYLSFMLGGTI 375 (746)
T ss_pred CCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHH-HHHHHHHcCCEE
Confidence 01112233457899999999999999999999887655432111123458899999999999985 566789999999
Q ss_pred EEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcC--------CCCCc-------------------------------
Q 039837 256 VMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKD--------PIVDE------------------------------- 296 (544)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------~~~~~------------------------------- 296 (544)
++.+. ++..+++.|+++++|+++++|.++..+.+. +....
T Consensus 376 ~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~k 454 (746)
T PTZ00342 376 NIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSK 454 (746)
T ss_pred EEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence 98764 789999999999999999999999888652 10000
Q ss_pred ---cCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccC-CCceEE
Q 039837 297 ---FDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFIL-PNLEVK 372 (544)
Q Consensus 297 ---~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~ 372 (544)
...+++|. +++||+++++++.+.|...+ ++.++++||+||+++.++... . .....+++|.|+ |+++++
T Consensus 455 ir~~lg~~lr~--~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~~----~-~~~~~gsvG~p~~pg~e~k 526 (746)
T PTZ00342 455 IKDKVNPNLEV--ILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQH----A-DDNNTESIGGPISPNTKYK 526 (746)
T ss_pred HHHhhCCCeEE--EEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeecc----C-CCCCcccccCcCCCcEEEE
Confidence 00134455 99999999999999999888 899999999999976655432 1 345678999998 999999
Q ss_pred EEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceee-cceeeCh
Q 039837 373 FINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKY-KGFQVAP 451 (544)
Q Consensus 373 i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~~ 451 (544)
|+|.+++.....+..|||+++||+++.|||++|+.|.+.|+.+|||+|||+|++|+||++++.||.+|+||+ +|++|+|
T Consensus 527 i~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p 606 (746)
T PTZ00342 527 VRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIET 606 (746)
T ss_pred EecccccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEch
Confidence 998554444455567999999999999999999999999988999999999999999999999999999996 7999999
Q ss_pred HHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCC--------C------CC---CH-----------HHHHHH--
Q 039837 452 AELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPN--------A------KE---SE-----------DDIMDF-- 501 (544)
Q Consensus 452 ~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--------~------~~---~~-----------~~l~~~-- 501 (544)
.+||++|.++|.|.+++|++.+. ...++|+|++... . .. +. .++.+.
T Consensus 607 ~eIE~~l~~~p~V~~~~VvG~~~---~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~ 683 (746)
T PTZ00342 607 DMLNNLYSQISFINFCVVYGDDS---MDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNIYVDYVK 683 (746)
T ss_pred HHHHHHHhcCCCccEEEEEccCC---ccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHHHHHHHH
Confidence 99999999999999999998632 2468888887641 0 00 11 111222
Q ss_pred -----H--HhcccCCCceeEEEEee-cC----CCCCCcccchHHHHHHHHHhhh
Q 039837 502 -----V--ASNVATYKKVRVLHFVD-GI----PKSHSGKIMRRILKDKMLEKMR 543 (544)
Q Consensus 502 -----l--~~~l~~~~~p~~~~~~~-~~----P~t~~GKi~r~~l~~~~~~~~~ 543 (544)
+ +..|+.+.++..|+.+. .| -+|++.|++|..+.+.|+..|+
T Consensus 684 ~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~~i~ 737 (746)
T PTZ00342 684 GKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAFFID 737 (746)
T ss_pred HHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHHHHH
Confidence 2 23588999999888873 22 3899999999999999985553
No 51
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.8e-66 Score=529.57 Aligned_cols=483 Identities=25% Similarity=0.358 Sum_probs=404.9
Q ss_pred HhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCC
Q 039837 43 LQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTA 122 (544)
Q Consensus 43 ~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 122 (544)
+.+|+.+||++|+.+..++..+||+||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|+++.+
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 45678899999998754578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceee
Q 039837 123 HASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVM 202 (544)
Q Consensus 123 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~ 202 (544)
+.+++..++++++++++++++..... ....+.++... ......... ..............+||||||.||+|.
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~ 154 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAG----RTDVEDLAAFI-ASADALEPA--DTPSIPPERVSLILFTSGTSGQPKGVM 154 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhcc----cccccchhhhh-hhccccccc--cCCCCCCCCceEEEeCCCCCCCCcEEE
Confidence 99999999999999999997654321 00000000000 000000000 000111223346788999999999999
Q ss_pred ccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHHHH--HcCceeeec
Q 039837 203 LTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDALI--THEVTFAPI 280 (544)
Q Consensus 203 ~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~--~~~~t~~~~ 280 (544)
+||+++...+....... .....+++++.+|++|.+|+...++.++..|+++++.+.+++..++..+. ++++|++.+
T Consensus 155 ~s~~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 232 (488)
T PRK09088 155 LSERNLQQTAHNFGVLG--RVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFC 232 (488)
T ss_pred EehHHHHHHHHHHHHhh--CCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEee
Confidence 99999988777666554 56788999999999999999888889999999999988888888888886 478999999
Q ss_pred chHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCC
Q 039837 281 VPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKN 360 (544)
Q Consensus 281 ~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~ 360 (544)
+|+++..+.+........+++++. +++||++++.+..+.+.+. ++++++.||+||++.+....... .......+
T Consensus 233 ~P~~~~~l~~~~~~~~~~~~~l~~--~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~--~~~~~~~~ 306 (488)
T PRK09088 233 VPQMAQAFRAQPGFDAAALRHLTA--LFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDC--DVIRAKAG 306 (488)
T ss_pred HHHHHHHHHhCcCcCccccccceE--EEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCc--ccccccCC
Confidence 999999998765444445667777 9999999999998888865 78999999999998654322110 11123557
Q ss_pred cccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCC
Q 039837 361 SVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKE 440 (544)
Q Consensus 361 ~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d 440 (544)
++|.|.++++++|+| +++..++.|+.|||+++|++++.||+++++.+...++.+|||+|||+|+++++|.+++.||.+|
T Consensus 307 ~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d 385 (488)
T PRK09088 307 AAGIPTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKD 385 (488)
T ss_pred ccccCCCCcEEEEEC-CCCCCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccc
Confidence 899999999999999 6789999999999999999999999999999988888899999999999999999999999999
Q ss_pred ceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeec
Q 039837 441 LIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDG 520 (544)
Q Consensus 441 ~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~ 520 (544)
+|+.+|.+++|.+||++|+++|+|.+++|++.++...|+..++++++.++...+.+++.++++++++++++|..++++++
T Consensus 386 ~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~ 465 (488)
T PRK09088 386 MFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGAPLDLERIRSHLSTRLAKYKVPKHLRLVDA 465 (488)
T ss_pred eEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCCCCCHHHHHHHHHhhCcCCCCCCEEEEccc
Confidence 99999999999999999999999999999999887778888899888776666788999999999999999999999999
Q ss_pred CCCCCCcccchHHHHHHHHHh
Q 039837 521 IPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 521 ~P~t~~GKi~r~~l~~~~~~~ 541 (544)
||+|++||++|++|++++.+.
T Consensus 466 iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 466 LPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred CCCCCCCceeHHHHHHHHHhc
Confidence 999999999999999988653
No 52
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.6e-66 Score=536.99 Aligned_cols=496 Identities=32% Similarity=0.552 Sum_probs=414.5
Q ss_pred CCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCee
Q 039837 36 VTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF 115 (544)
Q Consensus 36 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 115 (544)
.++.+.|.+.+..+|+++|+++. ++.+||+||.+++.++|++|.+.|+++||+|+++++|+.++++++|||+++|+++
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFL--GKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIV 101 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEec--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEE
Confidence 58999999999999999999986 7899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC----CcEEEecc-ccc--------------------------
Q 039837 116 SGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG----LPIIVLGE-ERI-------------------------- 164 (544)
Q Consensus 116 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~----~~~~~~~~-~~~-------------------------- 164 (544)
+|++|..+.+++.++++.++++++++++.....+.... ...+.+.. ...
T Consensus 102 vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (563)
T PRK06710 102 VQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVSES 181 (563)
T ss_pred eccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhccccccccccccc
Confidence 99999999999999999999999999876544332211 11111100 000
Q ss_pred ccccCHHHHHHhhhh------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHH
Q 039837 165 ESAINWSELIEAADK------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHI 238 (544)
Q Consensus 165 ~~~~~~~~~~~~~~~------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 238 (544)
.....+......... ..........+||||||.||+|.+||+++..........+.......+++++.+|++|.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~ 261 (563)
T PRK06710 182 ETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPFFHV 261 (563)
T ss_pred chhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCchHHH
Confidence 000011111110000 00112335679999999999999999999765433322211112345688999999999
Q ss_pred HHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhH
Q 039837 239 YGITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDL 318 (544)
Q Consensus 239 ~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~ 318 (544)
+|+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++........+++++. +++||+++++++
T Consensus 262 ~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~--v~~gg~~~~~~~ 339 (563)
T PRK06710 262 YGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRA--CISGSAPLPVEV 339 (563)
T ss_pred HHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhh--eeeCCCcCCHHH
Confidence 998777778999999999988889999999999999999999999999998866555556677777 999999999999
Q ss_pred HHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEeccccc
Q 039837 319 LSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVM 398 (544)
Q Consensus 319 ~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~ 398 (544)
.+++.+.+ ++.+++.||+||++.+..... .......+++|.|.+++.++++|++++.+++.|+.|||+++|+.++
T Consensus 340 ~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~----~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~~~ 414 (563)
T PRK06710 340 QEKFETVT-GGKLVEGYGLTESSPVTHSNF----LWEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQIM 414 (563)
T ss_pred HHHHHHhh-CCCEecccccccCccccccCc----ccccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCccc
Confidence 99999988 889999999999987554322 1122345689999999999999988899999999999999999999
Q ss_pred ccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCC
Q 039837 399 QGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAG 478 (544)
Q Consensus 399 ~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~ 478 (544)
.||+++++.+...+ .+|||+|||+++++++|.+++.||.+|+|+++|.+|+|.+||++|.++|.|.+++|++.++...|
T Consensus 415 ~gY~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~g 493 (563)
T PRK06710 415 KGYWNKPEETAAVL-QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVPDPYRG 493 (563)
T ss_pred hhhhCChHHHhhhc-ccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEEEccccCCcC
Confidence 99999999998877 68999999999999999999999999999999999999999999999999999999999988888
Q ss_pred ceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 479 EIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 479 ~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
+.++++++..++...+.+++.++++++++.+++|..++++++||+|.+||++|++|++++..+
T Consensus 494 ~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~~ 556 (563)
T PRK06710 494 ETVKAFVVLKEGTECSEEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKRK 556 (563)
T ss_pred ceeEEEEEECCCCCCCHHHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhhc
Confidence 999999998887777889999999999999999999999999999999999999999988654
No 53
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.1e-67 Score=551.60 Aligned_cols=498 Identities=22% Similarity=0.336 Sum_probs=397.2
Q ss_pred CCCCCCCHHHHHHhhhhhcCCceEEEEcc-------CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHH
Q 039837 31 PVPENVTLPDFVLQDAELYADKVAFVEAV-------SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGI 103 (544)
Q Consensus 31 ~~~~~~~l~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~ 103 (544)
..+...|+.+.|.++|+.+|+++|+++.. ..+.+||+||.++++++|++|.+. +++||+|+++++|++++++
T Consensus 16 ~~~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~ 94 (631)
T PRK07769 16 RFPPNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLI 94 (631)
T ss_pred cccccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHH
Confidence 34556799999999999999999998631 125799999999999999999987 8999999999999999999
Q ss_pred HHHHHHHhcCeeecC-CCCCC--HHHHHHHHHhcCceEEEeccchHHHhhcC----C----CcEEEecccccccccCHHH
Q 039837 104 VALGIMAAGGVFSGA-NPTAH--ASELKKQVDAADAKLIVSYAPIYEKVKGL----G----LPIIVLGEERIESAINWSE 172 (544)
Q Consensus 104 ~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~ 172 (544)
++|||+++|++++|+ ++..+ .+++.++++.++++++|++++..+.+... . ..++.++... ... ..
T Consensus 95 ~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~ 170 (631)
T PRK07769 95 AFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVP--DEV--GA 170 (631)
T ss_pred HHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccccc--ccc--cc
Confidence 999999999999999 55554 67899999999999999987765443221 1 1222222100 000 00
Q ss_pred HHHhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhcc
Q 039837 173 LIEAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNK 252 (544)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G 252 (544)
.. ............+.+||||||.||||++||+++...+......+ ++..+++++.++|++|.+|+.. ++.++..|
T Consensus 171 ~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~d~~l~~~Pl~h~~gl~~-~~~~~~~G 246 (631)
T PRK07769 171 TW-VPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDAL--EGQEGDRGVSWLPFFHDMGLIT-VLLPALLG 246 (631)
T ss_pred cc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHc--CCCCcceEEEeCCCcCchhhHH-HHHHHhhC
Confidence 00 00011223334678999999999999999999998877776666 6778899999999999999854 45566778
Q ss_pred ceEEEcCc--c--CHHHHHHHHHHcCc---eeeecchHHHHHHhcCC---C--CCccCccccccccEEEecCCCCHhHHH
Q 039837 253 GKVVMMNR--F--ELRAFLDALITHEV---TFAPIVPPIILSLVKDP---I--VDEFDLSKLQLRAVMTAAAPLAPDLLS 320 (544)
Q Consensus 253 ~~~~~~~~--~--~~~~~~~~i~~~~~---t~~~~~P~~~~~l~~~~---~--~~~~~~~~l~~~~v~~~G~~~~~~~~~ 320 (544)
+++++..+ + ++..+++.+.++++ +++..+|+++..++... . ....++++++. +++||+++++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~--~~~gg~~l~~~~~~ 324 (631)
T PRK07769 247 HYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKG--LLNGSEPVSPASMR 324 (631)
T ss_pred CeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheee--EEeccCCCCHHHHH
Confidence 88887753 3 78899999999876 78999999887766421 1 11346677777 99999999999999
Q ss_pred HHHhhcC-----CCeEEecccCccccccccccCCCCCC----------------------CCCCCCCcccccCCCceEEE
Q 039837 321 SFEKKFP-----GVQVQEAYGLTEHSCITLTYGDPANP----------------------SAGSKKNSVGFILPNLEVKF 373 (544)
Q Consensus 321 ~~~~~~~-----~~~i~~~yG~tE~~~~~~~~~~~~~~----------------------~~~~~~~~~G~~~~~~~~~i 373 (544)
+|.+.|+ ...+++.||+||++..++........ .......++|+|.+++.++|
T Consensus 325 ~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~i 404 (631)
T PRK07769 325 KFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVI 404 (631)
T ss_pred HHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEE
Confidence 9999872 34699999999987655543211100 00112357899999999999
Q ss_pred EeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccC-----------------CCCeeecCceEEEcCCCcEEEEe
Q 039837 374 INPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTID-----------------KNGWLHTGDIGYIDDDGDIFIVD 436 (544)
Q Consensus 374 ~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-----------------~~~~~~TGD~~~~~~~g~~~~~G 436 (544)
+|++++.+++.|+.|||+++||+++.|||++++.|.+.|. .++||+|||+|++ .+|+++++|
T Consensus 405 vd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~-~dG~l~i~G 483 (631)
T PRK07769 405 VDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVY-FDGELYITG 483 (631)
T ss_pred EcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccE-ECCEEEEEc
Confidence 9977899999999999999999999999999999988773 2489999999999 599999999
Q ss_pred ecCCceeecceeeChHHHHHHHhc-CCCccc--eEEEeecC-------------------CCCCceeEEEEEeCCCC-CC
Q 039837 437 RIKELIKYKGFQVAPAELEAILLT-HPSVED--AAVVSLPD-------------------EEAGEIPAACVVMNPNA-KE 493 (544)
Q Consensus 437 R~~d~i~~~G~~v~~~~iE~~l~~-~~~v~~--~~v~~~~~-------------------~~~~~~~~~~v~~~~~~-~~ 493 (544)
|.||+||++|++|+|.+||++|.+ ||.|.+ ++|+++++ +..++.+++++++.++. ..
T Consensus 484 R~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~~~~~~~ 563 (631)
T PRK07769 484 RVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERAPGAHKL 563 (631)
T ss_pred ccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCCccEEEEEEecCccccc
Confidence 999999999999999999999996 899998 88998887 45778899999988763 56
Q ss_pred CHHHHHHHHHhcccC-CC-ceeEEEEee--cCCCCCCcccchHHHHHHHHH
Q 039837 494 SEDDIMDFVASNVAT-YK-KVRVLHFVD--GIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 494 ~~~~l~~~l~~~l~~-~~-~p~~~~~~~--~~P~t~~GKi~r~~l~~~~~~ 540 (544)
+.++|.++++++|.. ++ .|..+++++ +||+|++|||+|++|+++|.+
T Consensus 564 ~~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~ 614 (631)
T PRK07769 564 DPQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLD 614 (631)
T ss_pred cHHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHc
Confidence 788999999999985 56 488888886 799999999999999998864
No 54
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.9e-66 Score=530.61 Aligned_cols=480 Identities=22% Similarity=0.331 Sum_probs=407.0
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCccHHHHHHHHHHh
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSL-GLRKGQVVIVVLPNVAEYGIVALGIMAA 111 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-Gi~~gd~V~i~~~n~~~~~~~~lA~~~~ 111 (544)
+...++.++|.++|. ++++++++. ++++||.||.+++.++|++|++. |++++++|+++++|+++++++++||+++
T Consensus 2 ~~~~~~~~~l~~~a~--~~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~ 77 (529)
T PRK07867 2 SSAPTVAELLLPLAE--DDDRGLYFE--DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALS 77 (529)
T ss_pred CccccHHHHHHHhcc--cCCceEEEC--CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 455689999998885 789999886 68999999999999999999997 8999999999999999999999999999
Q ss_pred cCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC--CcEEEecccccccccCHHHHHHhhh-------hcCC
Q 039837 112 GGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG--LPIIVLGEERIESAINWSELIEAAD-------KAGN 182 (544)
Q Consensus 112 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 182 (544)
|++++|+++.++.+++.++++++++++++++++....+.... ...+.++. ..+.+...... ....
T Consensus 78 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~~ 151 (529)
T PRK07867 78 GIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVDS------PAWADELAAHRDAEPPFRVADP 151 (529)
T ss_pred CCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEecc------ccHHHHhcccCCCCCCcccCCc
Confidence 999999999999999999999999999999988776555432 22222221 11222221100 0112
Q ss_pred CCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccC
Q 039837 183 NFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFE 262 (544)
Q Consensus 183 ~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~ 262 (544)
.....+.+||||||.||||++||+++..........+ ++...|+++..+|++|.+++...++.++..|+++++.+.++
T Consensus 152 ~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~ 229 (529)
T PRK07867 152 DDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF--GLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFS 229 (529)
T ss_pred cceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh--CCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCC
Confidence 2234567999999999999999999998888777766 67889999999999999998777888999999999988889
Q ss_pred HHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccc
Q 039837 263 LRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSC 342 (544)
Q Consensus 263 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~ 342 (544)
+..+++.++++++|++.++|+.+..++..........++++ +++||+.+++.. .+|.+.+ ++++++.||+||++.
T Consensus 230 ~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr---~~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~~ 304 (529)
T PRK07867 230 ASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLR---IVYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGGV 304 (529)
T ss_pred HHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceE---EEecCCCChHHH-HHHHHHh-CCcEEEeeccccccc
Confidence 99999999999999999999999998876543222223443 346888887765 6777778 889999999999986
Q ss_pred cccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCC------------CceEEE-ecccccccccCChhhhh
Q 039837 343 ITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNT------------PGELCV-RSQCVMQGYYNNEEETA 409 (544)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~------------~Gel~v-~~~~~~~gy~~~~~~~~ 409 (544)
..... .....+++|.|+++ ++++|++++.+++.|+ .|||++ +|++++.||+++++.+.
T Consensus 305 ~~~~~-------~~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~ 375 (529)
T PRK07867 305 AITRT-------PDTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADA 375 (529)
T ss_pred ccccC-------CCCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhh
Confidence 54422 12245678999999 6778877788888888 999999 99999999999999998
Q ss_pred cccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCC
Q 039837 410 RTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNP 489 (544)
Q Consensus 410 ~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 489 (544)
..+ .+|||+|||+++++++|.+++.||.+|+|+++|++++|.+||++|.++|+|.+++|++++++..|+.+++++++.+
T Consensus 376 ~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~ 454 (529)
T PRK07867 376 ERM-RGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMAALVLAP 454 (529)
T ss_pred hhh-cCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECC
Confidence 888 5899999999999999999999999999999999999999999999999999999999999988999999999988
Q ss_pred CCCCCHHHHHHHHHhc--ccCCCceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 490 NAKESEDDIMDFVASN--VATYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 490 ~~~~~~~~l~~~l~~~--l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
+...+.+++.++++++ |+.+++|..++++++||+|.+||++|++|+++..
T Consensus 455 ~~~~~~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~ 506 (529)
T PRK07867 455 GAKFDPDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGV 506 (529)
T ss_pred CCCCCHHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcC
Confidence 7778889999999875 9999999999999999999999999999999764
No 55
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=8.1e-66 Score=543.81 Aligned_cols=498 Identities=17% Similarity=0.208 Sum_probs=396.0
Q ss_pred CCCCHHHHHH-hhhhhcCCceEEEEccCC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHH
Q 039837 34 ENVTLPDFVL-QDAELYADKVAFVEAVSG------KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVAL 106 (544)
Q Consensus 34 ~~~~l~~~l~-~~a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~l 106 (544)
...|+.+.+. ++++.+|+++|+++..++ +++||+||.+++.++|++|++.|+++||+|+++++|++++++++|
T Consensus 172 ~~ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~L 251 (728)
T PLN03052 172 AVLNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYL 251 (728)
T ss_pred CEeEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 3456766444 455678999999875432 479999999999999999999999999999999999999999999
Q ss_pred HHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHH---------Hhhc-CCCcEEEecccc-------cccccC
Q 039837 107 GIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYE---------KVKG-LGLPIIVLGEER-------IESAIN 169 (544)
Q Consensus 107 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~-~~~~~~~~~~~~-------~~~~~~ 169 (544)
||+++|++++|+++.++.+++.+++++++++++|+.+.... .+.. .....+++.... ......
T Consensus 252 A~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~ 331 (728)
T PLN03052 252 AIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKLREGDMS 331 (728)
T ss_pred HHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCccccccccCCcc
Confidence 99999999999999999999999999999999999865321 1111 111222222110 012334
Q ss_pred HHHHHHhhhh-----------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHH
Q 039837 170 WSELIEAADK-----------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHI 238 (544)
Q Consensus 170 ~~~~~~~~~~-----------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 238 (544)
|+++...... ........+.+||||||.||||+++|.+++..+......+ ++.++|+++...|+.|+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~--~l~~~d~~~~~~~l~w~ 409 (728)
T PLN03052 332 WDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHL--DIRKGDIVCWPTNLGWM 409 (728)
T ss_pred HHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhc--CCCCCcEEEECCCcHHH
Confidence 5554432100 0112334578999999999999999999877665544444 67889999999999999
Q ss_pred HHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHh
Q 039837 239 YGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPD 317 (544)
Q Consensus 239 ~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~ 317 (544)
++. ..++.+|..|+++++.+. .++..+++.++++++|++.++|+++..|.+.......+++++|. ++++|++++++
T Consensus 410 ~g~-~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~--i~s~Ge~l~~~ 486 (728)
T PLN03052 410 MGP-WLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRC--FGSTGEASSVD 486 (728)
T ss_pred hHH-HHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeE--EEecCCCCCHH
Confidence 997 567899999999999874 45567999999999999999999999998765445667888777 99999999999
Q ss_pred HHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCC--CceEEEecc
Q 039837 318 LLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNT--PGELCVRSQ 395 (544)
Q Consensus 318 ~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~--~Gel~v~~~ 395 (544)
...++.+.++...+++.||+||+++.+.... .......+++|.|.+|++++|+| ++|++++.|+ .|||++.++
T Consensus 487 ~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~----~~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~ 561 (728)
T PLN03052 487 DYLWLMSRAGYKPIIEYCGGTELGGGFVTGS----LLQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPL 561 (728)
T ss_pred HHHHHHHhcCCCCeEeeccChhhCcccccCC----CCCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCC
Confidence 9888888764467999999999986544322 11223457899999999999999 6899999885 599999865
Q ss_pred c--ccccccCChhhhhcccC------CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHh-cCCCccc
Q 039837 396 C--VMQGYYNNEEETARTID------KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILL-THPSVED 466 (544)
Q Consensus 396 ~--~~~gy~~~~~~~~~~~~------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~ 466 (544)
. ...+|+++. .+...|. +..||+|||+++++++|+++++||+||+||++|++|++.|||++|. .||.|.+
T Consensus 562 ~~~~~~~~~~~~-~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~e 640 (728)
T PLN03052 562 MFGASSTLLNAD-HYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLE 640 (728)
T ss_pred CCCCCccccCch-hhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcce
Confidence 3 334666653 3333442 2338999999999999999999999999999999999999999995 7899999
Q ss_pred eEEEeecCCCCC-ceeEEEEEeC--CCCCCCHHHHHHH----HHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 467 AAVVSLPDEEAG-EIPAACVVMN--PNAKESEDDIMDF----VASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 467 ~~v~~~~~~~~~-~~~~~~v~~~--~~~~~~~~~l~~~----l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
++|++++++..| +.+++++++. ++...+.++|+++ ++++|+++++|..|+++++||+|.+||++|+.|++++.
T Consensus 641 aaVvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~~ 720 (728)
T PLN03052 641 TAAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVLRQQLA 720 (728)
T ss_pred EEEEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHHHHHHHHHH
Confidence 999999988766 7899999987 5555565666655 56778889999999999999999999999999999987
Q ss_pred Hhh
Q 039837 540 EKM 542 (544)
Q Consensus 540 ~~~ 542 (544)
+..
T Consensus 721 ~~~ 723 (728)
T PLN03052 721 QEL 723 (728)
T ss_pred hhh
Confidence 654
No 56
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=7e-66 Score=532.87 Aligned_cols=491 Identities=26% Similarity=0.401 Sum_probs=412.0
Q ss_pred CCCCHHHHHHhhhhhcCCceEEEEcc---CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHH
Q 039837 34 ENVTLPDFVLQDAELYADKVAFVEAV---SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMA 110 (544)
Q Consensus 34 ~~~~l~~~l~~~a~~~p~~~a~~~~~---~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~ 110 (544)
...|+.++++++|+++|+++|+.+.. +.+.+||+||.++++++|++|.+.|+++||+|+++++|+.+++++++||++
T Consensus 5 ~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~ 84 (517)
T PRK08008 5 GGQHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAK 84 (517)
T ss_pred ccccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 34689999999999999999998642 126899999999999999999999999999999999999999999999999
Q ss_pred hcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC------CCcEE-Eeccc--ccccccCHHHHHHhhhh--
Q 039837 111 AGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL------GLPII-VLGEE--RIESAINWSELIEAADK-- 179 (544)
Q Consensus 111 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~~~-~~~~~--~~~~~~~~~~~~~~~~~-- 179 (544)
+|++++++++..+.+++.++++++++++++++.+....+.+. ..+.+ ..+.. .......++........
T Consensus 85 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (517)
T PRK08008 85 IGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQPATL 164 (517)
T ss_pred cCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCCccc
Confidence 999999999999999999999999999999988766554332 12222 22211 11122333333221110
Q ss_pred -----cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccce
Q 039837 180 -----AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGK 254 (544)
Q Consensus 180 -----~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 254 (544)
..........+||||||.||+|++||+++........... .+..+++++..+|++|..+....++.++..|++
T Consensus 165 ~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~ 242 (517)
T PRK08008 165 CYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQC--ALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGAT 242 (517)
T ss_pred cccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhc--CCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcE
Confidence 0112234567999999999999999999986544333222 467889999999999988877888999999999
Q ss_pred EEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEec
Q 039837 255 VVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEA 334 (544)
Q Consensus 255 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 334 (544)
+++.+++++..+++.++++++|++.++|+++..++............++. +.++ .+++++....|.+.+ ++++++.
T Consensus 243 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~--~~~~-~~~~~~~~~~~~~~~-~~~~~~~ 318 (517)
T PRK08008 243 FVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLRE--VMFY-LNLSDQEKDAFEERF-GVRLLTS 318 (517)
T ss_pred EEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCcccccccccee--eEEe-cCCCHHHHHHHHHHh-CCeEEee
Confidence 99999899999999999999999999999999988765433333344444 6665 478999999999988 8999999
Q ss_pred ccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEec---ccccccccCChhhhhcc
Q 039837 335 YGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRS---QCVMQGYYNNEEETART 411 (544)
Q Consensus 335 yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~---~~~~~gy~~~~~~~~~~ 411 (544)
||+||++..+.... ........++|.|+++++++++| +++.+++.|+.|||+++| ++++.|||++++.+.+.
T Consensus 319 YG~tE~~~~~~~~~----~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~ 393 (517)
T PRK08008 319 YGMTETIVGIIGDR----PGDKRRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKV 393 (517)
T ss_pred ccccccccccccCC----ccccccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhc
Confidence 99999986554332 11234456899999999999999 688999999999999998 68999999999999999
Q ss_pred cCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCC
Q 039837 412 IDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNA 491 (544)
Q Consensus 412 ~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 491 (544)
+..+|||+|||+|+++++|.+++.||.+|+||++|++++|.+||+++.+++.|.+++|+++++...++.+.+++++.++.
T Consensus 394 ~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~ 473 (517)
T PRK08008 394 LEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGE 473 (517)
T ss_pred ccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCCC
Confidence 98899999999999999999999999999999999999999999999999999999999999888888899999998877
Q ss_pred CCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHH
Q 039837 492 KESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 535 (544)
Q Consensus 492 ~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~ 535 (544)
..+.+++.++++++++++++|..++++++||+|++||++|+.|+
T Consensus 474 ~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 474 TLSEEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred CCCHHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 77889999999999999999999999999999999999999874
No 57
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1.2e-65 Score=533.07 Aligned_cols=487 Identities=25% Similarity=0.339 Sum_probs=411.5
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEcc----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHH
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAV----SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMA 110 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~ 110 (544)
..|+.+.+.+.++.+|+++|++... .++.+||+||.+++.++|.+|++.|+++||+|+++++|+++++++++||++
T Consensus 21 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~ 100 (538)
T TIGR03208 21 DRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACAR 100 (538)
T ss_pred cCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 3589999999999999999987521 246899999999999999999999999999999999999999999999999
Q ss_pred hcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchH-----HHhh---c-CC-C-cEEEecccccccccCHHHHHHhh--
Q 039837 111 AGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIY-----EKVK---G-LG-L-PIIVLGEERIESAINWSELIEAA-- 177 (544)
Q Consensus 111 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~---~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~-- 177 (544)
+|++++|+++.++.+++.++++.++++++++++... .... . .. . .++..+.. ....++......
T Consensus 101 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 177 (538)
T TIGR03208 101 IGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGD---GDDSFDRVLMTPER 177 (538)
T ss_pred cCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCC---CCcCHHHHhhcccc
Confidence 999999999999999999999999999999976532 1111 1 11 1 22222211 111222222100
Q ss_pred ------------hhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHH
Q 039837 178 ------------DKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGIC 245 (544)
Q Consensus 178 ------------~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~ 245 (544)
..........+.+||||||.||||+++|+++...+......+ +...+++++..+|++|..|+...+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~g~~~~~ 255 (538)
T TIGR03208 178 DDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERL--ELGGGDVILMASPMAHQTGFMYGL 255 (538)
T ss_pred ccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhc--CCCCCCeEEEeCCchhHHHHHHHH
Confidence 011122334567899999999999999999999888777766 677889999999999999987888
Q ss_pred HhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhh
Q 039837 246 CATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKK 325 (544)
Q Consensus 246 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~ 325 (544)
+.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+........+++++. +++||+++++++.+++.+.
T Consensus 256 ~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~--~~~gG~~~~~~~~~~~~~~ 333 (538)
T TIGR03208 256 MMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFT--FLCAGAPIPGILVERAWEL 333 (538)
T ss_pred HHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceE--EEEcCCCCCHHHHHHHHHH
Confidence 99999999999988889999999999999999999999999988765434455677666 9999999999999999998
Q ss_pred cCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCCh
Q 039837 326 FPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNE 405 (544)
Q Consensus 326 ~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~ 405 (544)
+ ++.+++.||+||++.+....... .......++|+|+++++++|+| +++.+++.|+.|||+++|+.++.||++++
T Consensus 334 ~-~~~~~~~YG~tE~~~~~~~~~~~---~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~ 408 (538)
T TIGR03208 334 L-GALIVSAWGMTENGAVTVTEPDD---ALEKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGGYLKRP 408 (538)
T ss_pred c-CCeEEeeeccCcCCCccccCccc---chhhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCcccccccCCc
Confidence 8 78999999999998766543211 0122245789999999999999 57889999999999999999999999998
Q ss_pred hhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEE
Q 039837 406 EETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACV 485 (544)
Q Consensus 406 ~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 485 (544)
+.+. .+.++||+|||+|+++++|.+++.||.+|+|+++|++|+|.+||++|.++|+|.+++|++.++...++.+++++
T Consensus 409 ~~~~--~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v 486 (538)
T TIGR03208 409 HLNS--TDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAVV 486 (538)
T ss_pred cccc--ccCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEE
Confidence 8764 34789999999999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EeCCCCCCCHHHHHHHHHh-cccCCCceeEEEEeecCCCCCCcccchHHHH
Q 039837 486 VMNPNAKESEDDIMDFVAS-NVATYKKVRVLHFVDGIPKSHSGKIMRRILK 535 (544)
Q Consensus 486 ~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~ 535 (544)
++.++...+.+++.+++++ +++.+++|..+++++++|+|++||++|++|+
T Consensus 487 ~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 487 VPKPGCTLDFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred EECCCCCCCHHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 9887777788899999985 7999999999999999999999999999986
No 58
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.5e-67 Score=647.06 Aligned_cols=524 Identities=19% Similarity=0.249 Sum_probs=442.3
Q ss_pred CCCCcceeeccccccCCcceeee-cCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHH
Q 039837 2 AMPNSFSVPVPLAAAHDEEHIFR-SRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKAL 80 (544)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L 80 (544)
++|+..+.++++..+.+.+++.. ++.+..+.+...++.+.|.++|+++|+++|+++. ++++||+||.++++++|..|
T Consensus 1968 ~~~~~~~~~l~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~A~~~~--~~~lTy~eL~~~a~~lA~~L 2045 (5163)
T PRK12316 1968 EDAQAALGELALLDAGERQRILADWDRTPEAYPRGPGVHQRIAEQAARAPEAIAVVFG--DQHLSYAELDSRANRLAHRL 2045 (5163)
T ss_pred hCcccccccccCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEcC--CCeEcHHHHHHHHHHHHHHH
Confidence 57899999999999888877644 4555555666679999999999999999999986 78999999999999999999
Q ss_pred HHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC-CCcEEEe
Q 039837 81 RSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL-GLPIIVL 159 (544)
Q Consensus 81 ~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~ 159 (544)
.+.|+++|++|+++++|++++++++|||+++|+++||++|.++.+++.++++++++++++++++....+... ....+.+
T Consensus 2046 ~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~ 2125 (5163)
T PRK12316 2046 RARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAGVARLPL 2125 (5163)
T ss_pred HHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccccceEec
Confidence 999999999999999999999999999999999999999999999999999999999999988766554321 1222322
Q ss_pred cccccccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHH
Q 039837 160 GEERIESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIY 239 (544)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 239 (544)
+... ........ ...........+++.|||||||.||||+++|+++.+.+.+....+ ++.++++++.+.|++|..
T Consensus 2126 ~~~~--~~~~~~~~-~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~fd~ 2200 (5163)
T PRK12316 2126 DRDA--EWADYPDT-APAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERY--ELSPADCELQFMSFSFDG 2200 (5163)
T ss_pred cchh--hhhccCcc-CCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhc--CCCCcceEEEecCchHHH
Confidence 2110 00000000 000111223345788999999999999999999999998888777 788999999999999987
Q ss_pred HHHHHHHhhHhccceEEEcCc--cCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHh
Q 039837 240 GITGICCATLRNKGKVVMMNR--FELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPD 317 (544)
Q Consensus 240 g~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~ 317 (544)
++ ..++.++..|+++++.+. +++..+.+.++++++|++.++|+++..|.+...... ...++|. +++|||+++++
T Consensus 2201 ~~-~~~~~~L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~--~~~gGe~l~~~ 2276 (5163)
T PRK12316 2201 AH-EQWFHPLLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAVRV--YCFGGEAVPAA 2276 (5163)
T ss_pred HH-HHHHHHHhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcceeE--EEEecccCCHH
Confidence 76 788999999999987663 588999999999999999999999999987543222 2235556 99999999999
Q ss_pred HHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccc
Q 039837 318 LLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCV 397 (544)
Q Consensus 318 ~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~ 397 (544)
+.++|.+.+++..++|.||+||++..++...............++|+|+++++++|+| +++++++.|++|||+|+|+++
T Consensus 2277 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v 2355 (5163)
T PRK12316 2277 SLRLAWEALRPVYLFNGYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGL 2355 (5163)
T ss_pred HHHHHHHhCCCcEEEECccchhheeeeeeeecccccccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhh
Confidence 9999999888899999999999987665433211111122336799999999999999 678999999999999999999
Q ss_pred cccccCChhhhhcccC-------CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEE
Q 039837 398 MQGYYNNEEETARTID-------KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVV 470 (544)
Q Consensus 398 ~~gy~~~~~~~~~~~~-------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 470 (544)
++||+++|+.|.+.|. +.+||+|||+|++++||.++++||.||+||++|++|++.+||++|.++|+|.+++|+
T Consensus 2356 ~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~ 2435 (5163)
T PRK12316 2356 ARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVV 2435 (5163)
T ss_pred cccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEE
Confidence 9999999999998883 346999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHH
Q 039837 471 SLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 538 (544)
Q Consensus 471 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~ 538 (544)
+.++. .++.++++++..++.....++++++++++||.|++|..++++++||+|++||++|++|++..
T Consensus 2436 ~~~~~-~~~~l~a~v~~~~~~~~~~~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 2502 (5163)
T PRK12316 2436 AQDGA-SGKQLVAYVVPDDAAEDLLAELRAWLAARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKPD 2502 (5163)
T ss_pred EEecC-CCeEEEEEEEecCCCccCHHHHHHHHHhhCchhcCcceEeeecccCCCCCCccCHhhcCCCc
Confidence 88755 67889999998877777889999999999999999999999999999999999999997643
No 59
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.9e-66 Score=545.54 Aligned_cols=494 Identities=17% Similarity=0.203 Sum_probs=398.4
Q ss_pred CCCCCCHHHHHHhhhhhcCCceEEEEccC---CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHH
Q 039837 32 VPENVTLPDFVLQDAELYADKVAFVEAVS---GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGI 108 (544)
Q Consensus 32 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~ 108 (544)
.....|+.+.+.++ .+|+++|+++..+ .+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||
T Consensus 82 ~~~~~n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~ 159 (655)
T PRK03584 82 PGARLNYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLAT 159 (655)
T ss_pred CCCEeeHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 33445777777653 5799999986422 268999999999999999999999999999999999999999999999
Q ss_pred HHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchH---------HHh----hcCC-C-cEEEeccc-------cccc
Q 039837 109 MAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIY---------EKV----KGLG-L-PIIVLGEE-------RIES 166 (544)
Q Consensus 109 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~----~~~~-~-~~~~~~~~-------~~~~ 166 (544)
+++|++++|+++.++.+++.++++.++++++|+++... ..+ .... + .++.++.. ....
T Consensus 160 ~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 239 (655)
T PRK03584 160 ASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAALPG 239 (655)
T ss_pred HHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccccccCC
Confidence 99999999999999999999999999999999976531 111 1111 1 22222211 1112
Q ss_pred ccCHHHHHHhhhh-------cCCCCCCCCCCCCCCCcCcceeeccHHHHHH-HHHhhccccCCcccCccEEEEecchhHH
Q 039837 167 AINWSELIEAADK-------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVA-NLCSTLFSVVPEMIGQVTTLGLIPFFHI 238 (544)
Q Consensus 167 ~~~~~~~~~~~~~-------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 238 (544)
...|.++...... ........+.+||||||.||||++||++++. ........+ ++..+++++...++.|.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~ 317 (655)
T PRK03584 240 ALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHC--DLGPGDRFFWYTTCGWM 317 (655)
T ss_pred cccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhc--CCCCCCEEEEcCCchHH
Confidence 2345554431111 1123334678999999999999999998754 344444444 67888999999998887
Q ss_pred HHHHHHHHhhHhccceEEEcCc----cCHHHHHHHHHHcCceeeecchHHHHHHhcCCC--CCccCccccccccEEEecC
Q 039837 239 YGITGICCATLRNKGKVVMMNR----FELRAFLDALITHEVTFAPIVPPIILSLVKDPI--VDEFDLSKLQLRAVMTAAA 312 (544)
Q Consensus 239 ~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~~v~~~G~ 312 (544)
.+. .++.++..|+++++.+. .++..+++.++++++|++.++|+++..|.+... ....+++++|. +++||+
T Consensus 318 ~~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~--i~~~Ge 393 (655)
T PRK03584 318 MWN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRT--IGSTGS 393 (655)
T ss_pred hHH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEE--EEEecC
Confidence 543 46688999999998752 478999999999999999999999999876432 23356777777 999999
Q ss_pred CCCHhHHHHHHhhc-CCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEE
Q 039837 313 PLAPDLLSSFEKKF-PGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELC 391 (544)
Q Consensus 313 ~~~~~~~~~~~~~~-~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~ 391 (544)
++++++.+++.+.+ +++.+.+.||+||++....... .......+++|.|.+|++++|+| ++|.++ .|+.|||+
T Consensus 394 ~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~----~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~GeL~ 467 (655)
T PRK03584 394 PLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGN----PLLPVYRGEIQCRGLGMAVEAWD-EDGRPV-VGEVGELV 467 (655)
T ss_pred CCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCC----CCCCcCCCccCCCcCCceeEEEC-CCCCCC-CCCceEEE
Confidence 99999999999988 4688999999999865433221 11234567899999999999999 678888 79999999
Q ss_pred Eecc--cccccccCChhhhh--c-cc-CCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCcc
Q 039837 392 VRSQ--CVMQGYYNNEEETA--R-TI-DKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVE 465 (544)
Q Consensus 392 v~~~--~~~~gy~~~~~~~~--~-~~-~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~ 465 (544)
|+|| +++.|||++++.++ . .+ ..++||+|||+|++|+||++++.||+||+||++|++|+|.+||++|.+||.|.
T Consensus 468 v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ 547 (655)
T PRK03584 468 CTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVL 547 (655)
T ss_pred EccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcc
Confidence 9996 78999999987543 1 12 12579999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeecCCCCCceeEEEEEeCCCCCCCH---HHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 466 DAAVVSLPDEEAGEIPAACVVMNPNAKESE---DDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 466 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
+++|++++++..++.+++++++.++...+. +++.++++++|+.+++|..++++++||+|.+|||+|+.|++.+.
T Consensus 548 ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~ 624 (655)
T PRK03584 548 DSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLH 624 (655)
T ss_pred eEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccchHHHHHHHHc
Confidence 999999999888899999999987655443 57899999999999999999999999999999999999999875
No 60
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-66 Score=536.05 Aligned_cols=502 Identities=22% Similarity=0.321 Sum_probs=413.7
Q ss_pred CCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHH
Q 039837 28 PAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALG 107 (544)
Q Consensus 28 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA 107 (544)
|+.+.+...++.++|.+.|+.+|+++|+++. ++++||+||.+++.++|++|.+.|+++||+|+++++|+.+++++++|
T Consensus 2 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la 79 (540)
T PRK06164 2 PHDAAPRADTLASLLDAHARARPDAVALIDE--DRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLA 79 (540)
T ss_pred ccccccCCCCHHHHHHHHHHhCCCCeEEecC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 3455677779999999999999999999965 68999999999999999999999999999999999999999999999
Q ss_pred HHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchH-----HHhhcC------CCc-EEEecccc--cccc--cCHH
Q 039837 108 IMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIY-----EKVKGL------GLP-IIVLGEER--IESA--INWS 171 (544)
Q Consensus 108 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~------~~~-~~~~~~~~--~~~~--~~~~ 171 (544)
|+++|++++|+++..+.+++.++++.+++++++++.+.. +.+... .++ ++.++... .... ..+.
T Consensus 80 ~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (540)
T PRK06164 80 CARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARV 159 (540)
T ss_pred HHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCccccc
Confidence 999999999999999999999999999999999976642 111111 111 22222110 0000 0000
Q ss_pred HHHHhh----------hhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHH
Q 039837 172 ELIEAA----------DKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGI 241 (544)
Q Consensus 172 ~~~~~~----------~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 241 (544)
...... ............+||||||.||+|++||+++.+.+......+ ++..++++++.+|++|.+|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~ 237 (540)
T PRK06164 160 QLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY--GYDPGAVLLAALPFCGVFGF 237 (540)
T ss_pred ccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc--CCCCCCEEEEcCCchhHHHH
Confidence 000000 000112223456799999999999999999999888777777 67789999999999999998
Q ss_pred HHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEec-CCCCHhHHH
Q 039837 242 TGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAA-APLAPDLLS 320 (544)
Q Consensus 242 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G-~~~~~~~~~ 320 (544)
..++.++..|+++++.+.+++..+++.++++++|+++++|+++..|.+.. .....+++++. +.++| .+...++.+
T Consensus 238 -~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~--~~~~~~~~~~~~~~~ 313 (540)
T PRK06164 238 -STLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARL--FGFASFAPALGELAA 313 (540)
T ss_pred -HHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceee--eeeccCCcchHHHHH
Confidence 57889999999999998899999999999999999999999999998862 23445677665 66665 455566666
Q ss_pred HHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccC-CCceEEEEeCCCCCcCCCCCCceEEEecccccc
Q 039837 321 SFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFIL-PNLEVKFINPETGKSLPSNTPGELCVRSQCVMQ 399 (544)
Q Consensus 321 ~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~ 399 (544)
++.+. ++++++.||+||++.++....... .......+.|.++ +++.++|+|++++.+++.|+.|||+++|++++.
T Consensus 314 ~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~ 389 (540)
T PRK06164 314 LARAR--GVPLTGLYGSSEVQALVALQPATD--PVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMR 389 (540)
T ss_pred HHhhc--CCceecceeeccccceeeccCCCC--CCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccc
Confidence 66654 789999999999987665433111 1223334567775 899999999888999999999999999999999
Q ss_pred cccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCc
Q 039837 400 GYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGE 479 (544)
Q Consensus 400 gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~ 479 (544)
||+++++.|...|..++||+|||+|+++++|.+++.||.+|++|++|.+++|.+||+.|+++++|.+++|++.+. ..+.
T Consensus 390 gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~-~~~~ 468 (540)
T PRK06164 390 GYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATR-DGKT 468 (540)
T ss_pred cccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCC-CCce
Confidence 999999999999988999999999999999999999999999999999999999999999999999999999873 3456
Q ss_pred eeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCc---ccchHHHHHHHHHhh
Q 039837 480 IPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSG---KIMRRILKDKMLEKM 542 (544)
Q Consensus 480 ~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~G---Ki~r~~l~~~~~~~~ 542 (544)
.+++++++.++...+.+++.++++++++++++|..+++++.+|+|.+| |++|++|++++++..
T Consensus 469 ~~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~~ 534 (540)
T PRK06164 469 VPVAFVIPTDGASPDEAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQARL 534 (540)
T ss_pred eEEEEEEeCCCCCCCHHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHhh
Confidence 788998887776778899999999999999999999999999999999 999999999987654
No 61
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=9.9e-66 Score=532.13 Aligned_cols=487 Identities=25% Similarity=0.355 Sum_probs=414.6
Q ss_pred CHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeee
Q 039837 37 TLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFS 116 (544)
Q Consensus 37 ~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 116 (544)
++.+.|.++++++|+++|+.+. ++++||+||.+++.++|++|++.|+++||+|+++++|+.+++++++||+++|++++
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v 78 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHH--DRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFV 78 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEE
Confidence 4688999999999999999986 67999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----C-cEEEecccc-----cccccCHHHHHHhhhh-----c
Q 039837 117 GANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----L-PIIVLGEER-----IESAINWSELIEAADK-----A 180 (544)
Q Consensus 117 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~-~~~~~~~~~-----~~~~~~~~~~~~~~~~-----~ 180 (544)
|+++.++.+++..+++.+++++++++.+....+.... . .++.++... ......|+++...... .
T Consensus 79 ~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (515)
T TIGR03098 79 PINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALGDADPPHPV 158 (515)
T ss_pred eCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhccccccccCCC
Confidence 9999999999999999999999999877655443221 1 122332211 1112234444332111 1
Q ss_pred CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc
Q 039837 181 GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR 260 (544)
Q Consensus 181 ~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 260 (544)
.........+||||||.||+|.+||+++...+......+ ....+++++..+|++|.+++ ..++.++..|+++++.+.
T Consensus 159 ~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~ 235 (515)
T TIGR03098 159 IDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYL--ENRPDDRLLAVLPLSFDYGF-NQLTTAFYVGATVVLHDY 235 (515)
T ss_pred CcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHh--CCCcccEEEEECchhhHhHH-HHHHHHHHcCCEEEEcCC
Confidence 112223467899999999999999999998888777666 67888999999999999988 567899999999999988
Q ss_pred cCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccc
Q 039837 261 FELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEH 340 (544)
Q Consensus 261 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 340 (544)
.++..+++.++++++|++.++|+++..|.+.... ...+++++. ++++|+++++++.+.+.+.++++.+++.||+||+
T Consensus 236 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~l~~--~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 312 (515)
T TIGR03098 236 LLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWP-ESAAPSLRY--LTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEA 312 (515)
T ss_pred CCHHHHHHHHHHcCCceEecChHHHHHHHhcccC-CCCccceEE--EEecCCcCCHHHHHHHHHHCCCCeEeeeeccccc
Confidence 8999999999999999999999999999875322 234556666 9999999999999999999988999999999998
Q ss_pred cccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCC------
Q 039837 341 SCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDK------ 414 (544)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~------ 414 (544)
+....... .......+++|+|+++++++|+| ++++.++.|+.|||+++|+.++.|||++++.+...+..
T Consensus 313 ~~~~~~~~----~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~ 387 (515)
T TIGR03098 313 FRSTYLPP----EEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPG 387 (515)
T ss_pred cceEeccc----ccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccc
Confidence 76443321 11234567899999999999999 67889999999999999999999999999888665532
Q ss_pred -----CCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCC
Q 039837 415 -----NGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNP 489 (544)
Q Consensus 415 -----~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 489 (544)
++||+|||+|+++++|++++.||.+|+|+++|.+++|.+||+++.++|.|.+++|++++++..++.++++++..+
T Consensus 388 ~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~ 467 (515)
T TIGR03098 388 ELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTPPG 467 (515)
T ss_pred cccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEeCC
Confidence 348999999999999999999999999999999999999999999999999999999998888999999988766
Q ss_pred CCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHH
Q 039837 490 NAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKD 536 (544)
Q Consensus 490 ~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~ 536 (544)
+...+.+++.++++++|+++++|..++++++||+|.+||++|++|++
T Consensus 468 ~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 468 GEELDRAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred CCCCCHHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 66678899999999999999999999999999999999999999875
No 62
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.3e-66 Score=534.43 Aligned_cols=479 Identities=23% Similarity=0.336 Sum_probs=398.6
Q ss_pred CCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 36 VTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGL-RKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 36 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
.|+.++|.+++ .|+++|+++. +..+||+||.++++++|..|.+.|+ ++||+|+++++|+++++++++||+++|++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~--~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~ 78 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYG--DRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYV 78 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCE
Confidence 47888888765 6999999986 6899999999999999999999999 89999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC---CCcEEEecccccccccCHHHHHHhh------hhcCCCCC
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL---GLPIIVLGEERIESAINWSELIEAA------DKAGNNFS 185 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 185 (544)
++|++|.++.+++.++++++++++++++++....+.+. ...++.++.. .+.+..... ........
T Consensus 79 ~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 152 (540)
T PRK13388 79 LVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDTP------AYAELVAAAGALTPHREVDAMDP 152 (540)
T ss_pred EEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccch------hhhhhhccccCcCCCCCCCCCCe
Confidence 99999999999999999999999999988766555443 2233333211 111111100 01112333
Q ss_pred CCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHH
Q 039837 186 NDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRA 265 (544)
Q Consensus 186 ~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~ 265 (544)
....+||||||.||||.++|+++..........+ +...+++++..+|++|.+++...++.++..|+++++.+.+++..
T Consensus 153 a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~ 230 (540)
T PRK13388 153 FMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERF--GLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASG 230 (540)
T ss_pred EEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHh--CCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHH
Confidence 4568999999999999999999988887776666 77889999999999999988766777899999999988889999
Q ss_pred HHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCcccccccc
Q 039837 266 FLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITL 345 (544)
Q Consensus 266 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~ 345 (544)
+++.++++++|++..+|..+..++............++ +. .|+.+++....+|.+.+ ++++++.||+||++.++.
T Consensus 231 ~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~---~~-~G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~ 305 (540)
T PRK13388 231 FLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLR---VA-FGNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIVV 305 (540)
T ss_pred HHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceE---EE-ECCCCCHHHHHHHHHHh-CCceecccccccccceee
Confidence 99999999999999999999998876543222222322 23 36677888889999888 789999999999987664
Q ss_pred ccCCCCCCCCCCCCCcccccCCCceEE-----------EEeCCCCCcC-CCCCCceEEEe-cccccccccCChhhhhccc
Q 039837 346 TYGDPANPSAGSKKNSVGFILPNLEVK-----------FINPETGKSL-PSNTPGELCVR-SQCVMQGYYNNEEETARTI 412 (544)
Q Consensus 346 ~~~~~~~~~~~~~~~~~G~~~~~~~~~-----------i~d~~~~~~~-~~g~~Gel~v~-~~~~~~gy~~~~~~~~~~~ 412 (544)
.. .....+++|+|++++++. ++| ++|+.+ +.+..|||+++ |+.++.||+++++.+.+.|
T Consensus 306 ~~-------~~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~ 377 (540)
T PRK13388 306 RE-------PGTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERM 377 (540)
T ss_pred cC-------CCCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCcccccccCChHHHHHHh
Confidence 32 123457899999997653 334 345544 34678999998 9999999999999998888
Q ss_pred CCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCC
Q 039837 413 DKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAK 492 (544)
Q Consensus 413 ~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 492 (544)
.+|||+|||+|+++++|++++.||.+|+||++|++|+|.+||++|.++|+|.+++|+++++...|+.+++++++.++..
T Consensus 378 -~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~ 456 (540)
T PRK13388 378 -RHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMAALVLRDGAT 456 (540)
T ss_pred -hcCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEEEEEECCCCc
Confidence 5799999999999999999999999999999999999999999999999999999999998888888888888887777
Q ss_pred CCHHHHHHHHHhc--ccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 493 ESEDDIMDFVASN--VATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 493 ~~~~~l~~~l~~~--l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
.+.+++.++++.+ |+.+++|..++++++||+|.+||++|++|+++..+
T Consensus 457 ~~~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~ 506 (540)
T PRK13388 457 FDPDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWA 506 (540)
T ss_pred CCHHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccC
Confidence 7888999999764 99999999999999999999999999999987643
No 63
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.1e-67 Score=636.67 Aligned_cols=523 Identities=20% Similarity=0.245 Sum_probs=440.3
Q ss_pred CCCCcceeeccccccCCcceeee-cCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHH
Q 039837 2 AMPNSFSVPVPLAAAHDEEHIFR-SRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKAL 80 (544)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L 80 (544)
++|+..+.++++..+.+...+.. ++.+..+.+...++.++|.++|+++|+++|+++. ++.+||+||.++++++|++|
T Consensus 1539 ~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L 1616 (3956)
T PRK12467 1539 ADPERRLGELDLLDEAERRQILEGWNATHTGYPLARLVHQLIEDQAAATPEAVALVFG--EQELTYGELNRRANRLAHRL 1616 (3956)
T ss_pred hCccCceeeccccchHHhhhhHHhhcCCccCCCccccHHHHHHHHHHhCCCCeEEEeC--CcEEeHHHHHHHHHHHHHHH
Confidence 57899999999999988887754 5555555666679999999999999999999986 78999999999999999999
Q ss_pred HHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC-CCcEEEe
Q 039837 81 RSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL-GLPIIVL 159 (544)
Q Consensus 81 ~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~ 159 (544)
.+.|+++|++|++++++++++++++|||+++|++++|++|.++.+++.++++++++++++++......+... ....+.+
T Consensus 1617 ~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 1696 (3956)
T PRK12467 1617 IALGVGPEVLVGIAVERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLPDGLRSLVL 1696 (3956)
T ss_pred HHcCCCCCCEEEEEccCCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccccCCcEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999987765554332 2333433
Q ss_pred ccccc--ccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhH
Q 039837 160 GEERI--ESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFH 237 (544)
Q Consensus 160 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 237 (544)
+.... ..... ............+++.+||||||.||||+++|+++.+.+.+....+ ++...++++.+.|++|
T Consensus 1697 ~~~~~~~~~~~~----~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~f 1770 (3956)
T PRK12467 1697 DQEDDWLEGYSD----SNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAY--QLSAADVVLQFTSFAF 1770 (3956)
T ss_pred ccccchhccCCC----CCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhc--CCCcccEEEEecCccH
Confidence 32110 00000 0000011223345788999999999999999999999998887777 7888999999999999
Q ss_pred HHHHHHHHHhhHhccceEEEcCc---cCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCC
Q 039837 238 IYGITGICCATLRNKGKVVMMNR---FELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPL 314 (544)
Q Consensus 238 ~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~ 314 (544)
..++ +.++.++..|+++++.+. .++..+++.|+++++|++.++|+++..|.+... ....+++++. +++|||++
T Consensus 1771 d~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~--v~~gGe~l 1846 (3956)
T PRK12467 1771 DVSV-WELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRR--VVCGGEAL 1846 (3956)
T ss_pred HHHH-HHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceE--EEEccccC
Confidence 9887 678899999999999863 478999999999999999999999999987432 2234567666 99999999
Q ss_pred CHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEec
Q 039837 315 APDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRS 394 (544)
Q Consensus 315 ~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~ 394 (544)
++++.++|.+.+++..++|.||+||++..++...............++|+|+++++++|+| +.+++++.|+.|||+|+|
T Consensus 1847 ~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G 1925 (3956)
T PRK12467 1847 EVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGG 1925 (3956)
T ss_pred CHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecc
Confidence 9999999999888889999999999987665433211111223356899999999999999 689999999999999999
Q ss_pred ccccccccCChhhhhcccC-------CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccce
Q 039837 395 QCVMQGYYNNEEETARTID-------KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDA 467 (544)
Q Consensus 395 ~~~~~gy~~~~~~~~~~~~-------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 467 (544)
+++++||+++|+.|.+.|. +.+||+|||+|++++||.++++||.||+||++|++|++.+||++|.++|+|.++
T Consensus 1926 ~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~~p~V~~a 2005 (3956)
T PRK12467 1926 VGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLREQGGVREA 2005 (3956)
T ss_pred ccccccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHHhCCCcceE
Confidence 9999999999999998873 345999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCceeEEEEEeCCCCCC--------CHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHH
Q 039837 468 AVVSLPDEEAGEIPAACVVMNPNAKE--------SEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 538 (544)
Q Consensus 468 ~v~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~ 538 (544)
+|++.+ ...+..++++++...+... ..++++++++++||.|++|..++++++||+|++||++|++|.+..
T Consensus 2006 ~vv~~~-~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~l~~lP~t~~GKidr~~L~~~~ 2083 (3956)
T PRK12467 2006 VVIAQD-GANGKQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEYMVPAHLVFLARMPLTPNGKLDRKALPAPD 2083 (3956)
T ss_pred EEEEec-CCCCcEEEEEEEecCcccccccccccccHHHHHHHHHhhCchhhCchhhhhhhcCCCCCCCCcchhhCCCCc
Confidence 999886 4456789999987654321 346799999999999999999999999999999999999997654
No 64
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.4e-66 Score=592.87 Aligned_cols=519 Identities=19% Similarity=0.235 Sum_probs=430.5
Q ss_pred CCCCcceeeccccccCCcceeeecCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHH
Q 039837 2 AMPNSFSVPVPLAAAHDEEHIFRSRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALR 81 (544)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~ 81 (544)
++|+..+.++++..+.+...+...+....+.+. .++.++|.++++.+|+++|+++. ++.+||+||.++++++|+.|.
T Consensus 425 ~~p~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~p~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~ 501 (1296)
T PRK10252 425 ADPALLCGDVDILLPGEYAQLAQVNATAVEIPE-TTLSALVAQQAAKTPDAPALADA--RYQFSYREMREQVVALANLLR 501 (1296)
T ss_pred hCCCCChhhcCCCCHHHHHHHHHhcCCCCCCCc-CCHHHHHHHHHHhCCCCeEEEcC--CCcEeHHHHHHHHHHHHHHHH
Confidence 467888888888877766655444444444443 68999999999999999999987 689999999999999999999
Q ss_pred HcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-CcEEEec
Q 039837 82 SLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-LPIIVLG 160 (544)
Q Consensus 82 ~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~ 160 (544)
+.|+++||+|+++++|+++++++++||+++|++++|++++++.+++..+++.+++++++++.+....+.... ......+
T Consensus 502 ~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 581 (1296)
T PRK10252 502 ERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVPDLTSLCYN 581 (1296)
T ss_pred HcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCCCceeeecc
Confidence 999999999999999999999999999999999999999999999999999999999999887665554321 1111111
Q ss_pred ccccccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHH
Q 039837 161 EERIESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYG 240 (544)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 240 (544)
...... ... ..........+++.+||||||.||||+++|+++.+.+.+....+ ++.++++++...|++|..+
T Consensus 582 ~~~~~~--~~~----~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~fd~~ 653 (1296)
T PRK10252 582 APLAPQ--GAA----PLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHY--PLTADDVVLQKTPCSFDVS 653 (1296)
T ss_pred cccccc--cCC----CCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc--CCCCCCEEEEeCCcchhhh
Confidence 100000 000 00011223345788999999999999999999999998888877 7889999999999999988
Q ss_pred HHHHHHhhHhccceEEEcC---ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCc--cCccccccccEEEecCCCC
Q 039837 241 ITGICCATLRNKGKVVMMN---RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDE--FDLSKLQLRAVMTAAAPLA 315 (544)
Q Consensus 241 ~~~~~~~~l~~G~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--~~~~~l~~~~v~~~G~~~~ 315 (544)
+ ..++.++..|+++++.+ ..++..+.+.++++++|++.++|+++..+++...... ..+++++. +++|||+++
T Consensus 654 ~-~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~--i~~gGe~l~ 730 (1296)
T PRK10252 654 V-WEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQ--VFCSGEALP 730 (1296)
T ss_pred H-HHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccE--EEEecCCCC
Confidence 7 67888999999999976 3578999999999999999999999999887543222 23456666 999999999
Q ss_pred HhHHHHHHhhcCCCeEEecccCccccccccccCCCCCC--CCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEe
Q 039837 316 PDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANP--SAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVR 393 (544)
Q Consensus 316 ~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~--~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~ 393 (544)
+++.++|.+.+ +++++|.||+||++..++........ .......++|+|++++.++|+| +.+++++.|+.|||+|+
T Consensus 731 ~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~ 808 (1296)
T PRK10252 731 ADLCREWQQLT-GAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLT 808 (1296)
T ss_pred HHHHHHHHhcC-CCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEec
Confidence 99999999877 89999999999998766544321111 0123456899999999999999 78999999999999999
Q ss_pred cccccccccCChhhhhcccCC------CCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccce
Q 039837 394 SQCVMQGYYNNEEETARTIDK------NGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDA 467 (544)
Q Consensus 394 ~~~~~~gy~~~~~~~~~~~~~------~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 467 (544)
|+.+++||+++|+.|...|.. .+||+|||+|++++||.++++||.||+||++|++|++.+||++|.++|+|.++
T Consensus 809 g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a 888 (1296)
T PRK10252 809 GIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQA 888 (1296)
T ss_pred ccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccce
Confidence 999999999999999888743 34999999999999999999999999999999999999999999999999999
Q ss_pred EEEeec----CCCCC--ceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHH
Q 039837 468 AVVSLP----DEEAG--EIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKD 536 (544)
Q Consensus 468 ~v~~~~----~~~~~--~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~ 536 (544)
+|+... +...+ ..++++++...+...+.++++++++++|+.|++|..++.+++||+|++||++|++|++
T Consensus 889 ~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~ 963 (1296)
T PRK10252 889 VTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPL 963 (1296)
T ss_pred EEEEEeccccccCCCCccEEEEEEEcCCCCCCCHHHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCC
Confidence 877552 11122 3689998877665667889999999999999999999999999999999999999865
No 65
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.6e-65 Score=540.00 Aligned_cols=492 Identities=17% Similarity=0.201 Sum_probs=392.9
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEccC---CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHH
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEAVS---GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIM 109 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~ 109 (544)
....|+...+.++ .++++|+++..+ .+++||+||.+++.++|++|++.|+++||+|+++++|++++++++|||+
T Consensus 84 ~~~~n~~~~~~~~---~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~ 160 (652)
T TIGR01217 84 GARLNYAENLLRA---AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATA 160 (652)
T ss_pred CCeeeHHHHHhcc---CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 4556787777664 578999876422 2589999999999999999999999999999999999999999999999
Q ss_pred HhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchH---------HHhh----cCC-Cc-EEEecccc--------ccc
Q 039837 110 AAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIY---------EKVK----GLG-LP-IIVLGEER--------IES 166 (544)
Q Consensus 110 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~----~~~-~~-~~~~~~~~--------~~~ 166 (544)
++|++++|+++.++.+++.+++++++++++|+++... +.+. ... ++ ++.+.... ...
T Consensus 161 ~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 240 (652)
T TIGR01217 161 SVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKIDG 240 (652)
T ss_pred HhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCcccccccccC
Confidence 9999999999999999999999999999999976531 2221 111 12 22222100 012
Q ss_pred ccCHHHHHHhhhh-------cCCCCCCCCCCCCCCCcCcceeeccHHHHHH-HHHhhccccCCcccCccEEEEecchhHH
Q 039837 167 AINWSELIEAADK-------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVA-NLCSTLFSVVPEMIGQVTTLGLIPFFHI 238 (544)
Q Consensus 167 ~~~~~~~~~~~~~-------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 238 (544)
...++++...... ........+.+||||||.||||++||++++. ........+ ++.++|+++...|+.|.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~ 318 (652)
T TIGR01217 241 ALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC--DLGPGDRLFYYTTTGWM 318 (652)
T ss_pred cccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc--CCCCCcEEEEeCCcchh
Confidence 2345554432111 1113344678999999999999999998654 333333344 67888999999999987
Q ss_pred HHHHHHHHhhHhccceEEEcCc----cCHHHHHHHHHHcCceeeecchHHHHHHhcCCC--CCccCccccccccEEEecC
Q 039837 239 YGITGICCATLRNKGKVVMMNR----FELRAFLDALITHEVTFAPIVPPIILSLVKDPI--VDEFDLSKLQLRAVMTAAA 312 (544)
Q Consensus 239 ~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~~v~~~G~ 312 (544)
++ ..++.++..|+++++.+. .++..+++.++++++|++.+.|+++..+.+... ....+++++|. +++||+
T Consensus 319 ~~--~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~--i~~gGe 394 (652)
T TIGR01217 319 MW--NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQC--VASTGS 394 (652)
T ss_pred hh--HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeE--EEeecC
Confidence 54 235579999999999752 268899999999999999888888877765321 23456788777 999999
Q ss_pred CCCHhHHHHHHhhcC-CCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEE
Q 039837 313 PLAPDLLSSFEKKFP-GVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELC 391 (544)
Q Consensus 313 ~~~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~ 391 (544)
++++++.+++.+.++ +..+.+.||+||++....... .......+++|.|.+|++++|+| ++|+++ .|+.|||+
T Consensus 395 ~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~----~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~~GEl~ 468 (652)
T TIGR01217 395 PLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGAN----PTLPVHIGEIQAPGLGTAVQSWD-PEGKPV-TGEVGELV 468 (652)
T ss_pred CCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCC----CCCCCcCCccCCCcCCCceEEEC-CCCCCC-CCCccEEE
Confidence 999999999998873 456789999999754333221 11223457889999999999999 678887 59999999
Q ss_pred Eecc--cccccccCChhhhh---cccC-CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCcc
Q 039837 392 VRSQ--CVMQGYYNNEEETA---RTID-KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVE 465 (544)
Q Consensus 392 v~~~--~~~~gy~~~~~~~~---~~~~-~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~ 465 (544)
++|| +++.|||++++.++ ..|. .+|||+|||+|++|+||+++++||+||+||++|++|+|.+||++|.+||+|.
T Consensus 469 v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~ 548 (652)
T TIGR01217 469 CTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVR 548 (652)
T ss_pred EecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcc
Confidence 9996 68999999998654 2232 3689999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeecCCCCCceeEEEEEeCCCCCCCH---HHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 466 DAAVVSLPDEEAGEIPAACVVMNPNAKESE---DDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 466 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
+++|++++++..|+.++++|++.++...+. ++++++++++|+.+++|..++++++||+|.+|||+|+.|++.+.
T Consensus 549 eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~ 625 (652)
T TIGR01217 549 ESLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQ 625 (652)
T ss_pred eEEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHHc
Confidence 999999999988999999999987765554 58999999999999999999999999999999999999999874
No 66
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=6.4e-67 Score=643.38 Aligned_cols=518 Identities=19% Similarity=0.252 Sum_probs=440.2
Q ss_pred CCCCcceeeccccccCCcceee-ecCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHH
Q 039837 2 AMPNSFSVPVPLAAAHDEEHIF-RSRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKAL 80 (544)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L 80 (544)
++|+..+..+++..+.+..++. .++.+....+...++.++|.+.|+++|+++|+++. ++++||+||.++++++|+.|
T Consensus 476 ~~p~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~A~~~~--~~~~TY~eL~~~~~~lA~~L 553 (5163)
T PRK12316 476 ENPQARVDELPMLDAEERGQLVEGWNATAAEYPLQRGVHRLFEEQVERTPEAPALAFG--EETLDYAELNRRANRLAHAL 553 (5163)
T ss_pred hccccccccCCCCCHHHHHHHHHHhcCccccCCCCCCHHHHHHHHHHHCCCCeEEEeC--CceEcHHHHHHHHHHHHHHH
Confidence 5788999999999888876653 34444445555679999999999999999999986 68999999999999999999
Q ss_pred HHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC-CCcEEEe
Q 039837 81 RSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL-GLPIIVL 159 (544)
Q Consensus 81 ~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~ 159 (544)
.+.|+++|++|+++++|++++++++|||+++|++++|++|.++.+++.++++.+++++++++......+... ....+.+
T Consensus 554 ~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 633 (5163)
T PRK12316 554 IERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDL 633 (5163)
T ss_pred HHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcccCceEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999987765544322 2333333
Q ss_pred cccccccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHH
Q 039837 160 GEERIESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIY 239 (544)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 239 (544)
+..... ...... ............+++.+||||||.||||+++|+++.+.+.+....+ ++..+++++..+|++|..
T Consensus 634 ~~~~~~-~~~~~~-~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~--~~~~~d~~l~~~p~~fd~ 709 (5163)
T PRK12316 634 DRPAAW-LEGYSE-ENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAY--GLGVGDTVLQKTPFSFDV 709 (5163)
T ss_pred cCcchh-hccCCC-CCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhc--CCCCCCEEEeeCCeehHH
Confidence 211100 000000 0000011222334678999999999999999999999999888877 788999999999999999
Q ss_pred HHHHHHHhhHhccceEEEcC---ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCH
Q 039837 240 GITGICCATLRNKGKVVMMN---RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAP 316 (544)
Q Consensus 240 g~~~~~~~~l~~G~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~ 316 (544)
++ ..++.++..|+++++.+ ..++..+.+.++++++|++.++|+++..|++... ...+++++. +++|||++++
T Consensus 710 ~~-~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l~~--~~~gGe~l~~ 784 (5163)
T PRK12316 710 SV-WEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--VASCTSLRR--IVCSGEALPA 784 (5163)
T ss_pred HH-HHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCccE--EEEeeccCCH
Confidence 97 67899999999999985 3689999999999999999999999999987543 234667777 9999999999
Q ss_pred hHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEeccc
Q 039837 317 DLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQC 396 (544)
Q Consensus 317 ~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~ 396 (544)
++.++|.+.+++++++|.||+||++..++.... ........++|+|++|++++|+| +++++++.|+.|||+|+|++
T Consensus 785 ~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~---~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~ 860 (5163)
T PRK12316 785 DAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTC---VEEGGDSVPIGRPIANLACYILD-ANLEPVPVGVLGELYLAGRG 860 (5163)
T ss_pred HHHHHHHHhCCCCeEEeCcCcChheeeeeEEec---ccccCCCCCCccccCCCEEEEEC-CCCCCCCCCCceEEEecccc
Confidence 999999988888999999999999865443322 11234456899999999999999 57899999999999999999
Q ss_pred ccccccCChhhhhcccC------CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEE
Q 039837 397 VMQGYYNNEEETARTID------KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVV 470 (544)
Q Consensus 397 ~~~gy~~~~~~~~~~~~------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 470 (544)
++.||+++|+.|...|. +++||+|||+|++++||.+++.||.||+||++|++|+|.+||++|.+||+|.+++|+
T Consensus 861 v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~ 940 (5163)
T PRK12316 861 LARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVL 940 (5163)
T ss_pred cChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEE
Confidence 99999999999998873 346999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHH
Q 039837 471 SLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKM 538 (544)
Q Consensus 471 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~ 538 (544)
+.+ ++.+++++++.++.....++++++++++|+.|++|..++++++||+|++||++|++|.+..
T Consensus 941 ~~~----~~~lva~vv~~~~~~~~~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~ 1004 (5163)
T PRK12316 941 AVD----GKQLVGYVVLESEGGDWREALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKALPAPE 1004 (5163)
T ss_pred EcC----CCeEEEEEEccCCCCCCHHHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhhcCcc
Confidence 886 5789999998776667788999999999999999999999999999999999999998653
No 67
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=2.2e-65 Score=530.09 Aligned_cols=490 Identities=23% Similarity=0.338 Sum_probs=412.4
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
..++.+.|+++|+ |+++|+++. ++.+||+||.+++.++|.+|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 24 ~~~~~~~~~~~a~--p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v 99 (536)
T PRK10946 24 DLPLTDILTRHAA--SDAIAVICG--ERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVA 99 (536)
T ss_pred CccHHHHHHHhhC--CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeE
Confidence 4689999999887 999999986 689999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccch--------HHHhhcC--CCcEEEecccccccccCHHHHHHhhh------
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPI--------YEKVKGL--GLPIIVLGEERIESAINWSELIEAAD------ 178 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------ 178 (544)
++++.+.....++..+++.+++++++++... ...+... ....+.+... .....+........
T Consensus 100 ~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 177 (536)
T PRK10946 100 PVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLND--DGEHSLDDAINHPAEDFTAT 177 (536)
T ss_pred EecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecC--CCCccHHHHhhCcccccccC
Confidence 8888777778889999999999999987542 1222221 1222322211 11222333332211
Q ss_pred hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHH-HHHhhHhccceEEE
Q 039837 179 KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITG-ICCATLRNKGKVVM 257 (544)
Q Consensus 179 ~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~~l~~G~~~~~ 257 (544)
...........+||||||.||||++||+++...+......+ ++..++++++.+|++|.+++.. .++.++..|+++++
T Consensus 178 ~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~--~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~ 255 (536)
T PRK10946 178 PSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC--GFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVL 255 (536)
T ss_pred CCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhc--CCCCCceEEEecCccccccchhhhHHHHhhcCcEEEE
Confidence 11122233567899999999999999999999988777666 7788899999999999888754 56788999999999
Q ss_pred cCccCHHHHHHHHHHcCceeeecchHHHHHHhcCC--CCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecc
Q 039837 258 MNRFELRAFLDALITHEVTFAPIVPPIILSLVKDP--IVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAY 335 (544)
Q Consensus 258 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 335 (544)
.+..++..+++.++++++|++.++|.++..|++.. ......+++++. +++||+++++++.++|.+.+ ++++++.|
T Consensus 256 ~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~--v~~gg~~l~~~~~~~~~~~~-g~~~~~~Y 332 (536)
T PRK10946 256 APDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKL--LQVGGARLSETLARRIPAEL-GCQLQQVF 332 (536)
T ss_pred CCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeE--EEECCCCCCHHHHHHHHHhc-CCeEEEee
Confidence 88889999999999999999999999999998752 222334566666 99999999999999999988 89999999
Q ss_pred cCccccccccccCCCCCCCCCCCCCcccccC-CCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCC
Q 039837 336 GLTEHSCITLTYGDPANPSAGSKKNSVGFIL-PNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDK 414 (544)
Q Consensus 336 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 414 (544)
|+||++....... ........++|+|+ +++.++++| +++++++.|+.|||+++|+.++.||+++++.+...|+.
T Consensus 333 G~tE~~~~~~~~~----~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~ 407 (536)
T PRK10946 333 GMAEGLVNYTRLD----DSDERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDA 407 (536)
T ss_pred cccccceeeecCC----CccccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchhhcCCcccchhhccc
Confidence 9999653332111 11233457899998 899999999 68899999999999999999999999999999999988
Q ss_pred CCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCC
Q 039837 415 NGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKES 494 (544)
Q Consensus 415 ~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 494 (544)
++||+|||+|+++++|++++.||.+|+++++|.+++|.+||+.|.++|+|.+++|++.++...|+.+++++++.++ .+
T Consensus 408 d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~--~~ 485 (536)
T PRK10946 408 NGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEP--LK 485 (536)
T ss_pred CCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCC--CC
Confidence 9999999999999999999999999999999999999999999999999999999999988888889999987654 77
Q ss_pred HHHHHHHHHhc-ccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhh
Q 039837 495 EDDIMDFVASN-VATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 542 (544)
Q Consensus 495 ~~~l~~~l~~~-l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~ 542 (544)
.+++.+++++. +++|++|..+++++++|+|++||++|++|++++.++.
T Consensus 486 ~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 486 AVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred HHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhhc
Confidence 88999999886 9999999999999999999999999999999987764
No 68
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.6e-65 Score=531.50 Aligned_cols=492 Identities=28% Similarity=0.481 Sum_probs=407.2
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSL-GLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
..++.+.|.++++.+|+++|+.+. ++.+||.||.++++++|++|.+. |+++||+|+++++|+++++++++||+++|+
T Consensus 23 ~~~~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~ 100 (562)
T PRK12492 23 YKSVVEVFERSCKKFADRPAFSNL--GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGL 100 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEecC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 468999999999999999999875 67999999999999999999985 999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC----CCcEEEec---c-----------------------cc
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL----GLPIIVLG---E-----------------------ER 163 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~---~-----------------------~~ 163 (544)
+++++++.++.+++.+++++++++++++++...+.+... ........ + ..
T Consensus 101 v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (562)
T PRK12492 101 IVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYH 180 (562)
T ss_pred EEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccccC
Confidence 999999999999999999999999999876543322211 00100000 0 00
Q ss_pred cccccCHHHHHHhhhh-------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCC-c------ccC-ccE
Q 039837 164 IESAINWSELIEAADK-------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVP-E------MIG-QVT 228 (544)
Q Consensus 164 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~-~------~~~-~~~ 228 (544)
......++........ ........+.+||||||.||||++||+++...+......+.. . ... .++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (562)
T PRK12492 181 LPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQEV 260 (562)
T ss_pred CcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCCeE
Confidence 0011223333222110 111223456789999999999999999998776554433210 1 122 356
Q ss_pred EEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccE
Q 039837 229 TLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAV 307 (544)
Q Consensus 229 ~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v 307 (544)
++..+|++|.+++...++..+..|...++.. +.++..+++.++++++|++.++|+++..|++.......+++++++ +
T Consensus 261 ~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~--~ 338 (562)
T PRK12492 261 MIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKL--T 338 (562)
T ss_pred EEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeE--E
Confidence 7889999999998777778888888776654 568899999999999999999999999998876655566777777 9
Q ss_pred EEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCC
Q 039837 308 MTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTP 387 (544)
Q Consensus 308 ~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~ 387 (544)
++||+++++++.++|.+.+ ++++++.||+||++.++..... ......+++|+|+++++++|+| +++.+++.|+.
T Consensus 339 ~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~----~~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~ 412 (562)
T PRK12492 339 NSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPY----GELARLGTVGIPVPGTALKVID-DDGNELPLGER 412 (562)
T ss_pred EeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCC----cccccCCccceecCCCEEEEEC-CCCCCCCCCCc
Confidence 9999999999999999887 8999999999999876654331 1223456899999999999999 57899999999
Q ss_pred ceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccce
Q 039837 388 GELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDA 467 (544)
Q Consensus 388 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 467 (544)
|||+++|+.++.|||++++.+...|+.++||+|||+|+++++|.+++.||.+|+++++|.+++|.+||+.|.++|.|.++
T Consensus 413 Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~ 492 (562)
T PRK12492 413 GELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKVANC 492 (562)
T ss_pred eEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEE
Confidence 99999999999999999999998887789999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHH
Q 039837 468 AVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDK 537 (544)
Q Consensus 468 ~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~ 537 (544)
+|++.++...++.++++++..+. ..+.+++.++++++|+.+++|..++++++||+|.+||++|++|+++
T Consensus 493 ~v~~~~~~~~~~~~~~~v~~~~~-~~~~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 493 AAIGVPDERSGEAVKLFVVARDP-GLSVEELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKILRRELRDI 561 (562)
T ss_pred EEEeccCCCCCceEEEEEEeCCC-CCCHHHHHHHHHHhcccccCCcEEEEeccCCCCCCCceeHHHHHhh
Confidence 99999888788888888876543 4577899999999999999999999999999999999999999875
No 69
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=9.3e-66 Score=530.43 Aligned_cols=484 Identities=20% Similarity=0.285 Sum_probs=405.3
Q ss_pred CHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeee
Q 039837 37 TLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFS 116 (544)
Q Consensus 37 ~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 116 (544)
++.+.|.+.|+.+|+++|+.+. ++.+||+||.+++.++|+.|.+.|+++||+|+++++|+.+++++++||+++|++++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v 78 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQ--GQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYI 78 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEe
Confidence 5778999999999999999876 78999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHHhh------hhcCCCCCCCCCC
Q 039837 117 GANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAA------DKAGNNFSNDDDV 190 (544)
Q Consensus 117 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 190 (544)
|+++.++.+++.++++..+++.++++.+....... ...+.++. ........ ..........+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~--~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~il~ 148 (502)
T TIGR01734 79 PVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG--TQIITLSA--------LEQAETSGGPVSFDHAVKGDDNYYIIY 148 (502)
T ss_pred CCCCcChHHHHHHHHHhcCCCEEEecccccccccC--CceEEchH--------hhhhhhhcCCccccccCCCCCeEEEEE
Confidence 99999999999999999999999998765433322 12222210 00000000 0111222335788
Q ss_pred CCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc---cCHHHHH
Q 039837 191 KQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR---FELRAFL 267 (544)
Q Consensus 191 tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~ 267 (544)
||||||.||+|.+||+++...+.+....+ ....++.++...|++|..++ ..++.++..|+++++.++ .++..++
T Consensus 149 TSGTTG~PK~v~~s~~~~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~ 225 (502)
T TIGR01734 149 TSGSTGNPKGVQISHDNLVSFTNWMLADF--PLSEGKQFLNQAPFSFDLSV-MDLYPCLASGGTLHCLDKDITNNFKLLF 225 (502)
T ss_pred CCCCCCCCCEEEEecHHHHHHHHHHHHhC--CCCCCceEEeecCceechhH-HHHHHHHHCCCEEEEcCHHHhcCHHHHH
Confidence 99999999999999999999888777666 77888999999999999887 677889999999998874 4788999
Q ss_pred HHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCcccccccccc
Q 039837 268 DALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTY 347 (544)
Q Consensus 268 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~ 347 (544)
+.+.+++++.+.++|+++..++.........+++++. ++++|++++.++.+++.+.++++.+++.||+||++..+...
T Consensus 226 ~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~--~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~ 303 (502)
T TIGR01734 226 EELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTH--FLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSV 303 (502)
T ss_pred HHHHHcCCeEEEEChhHHHHHHhccccccccCCcccE--EEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEE
Confidence 9999999999999999998877654444455667666 99999999999999999999899999999999998655433
Q ss_pred CCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhccc---CCCCeeecCceE
Q 039837 348 GDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTI---DKNGWLHTGDIG 424 (544)
Q Consensus 348 ~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~~~~~~TGD~~ 424 (544)
....+........++|.+.++++++|+| +++.+++.|+.|||+++|+.++.||+++++.+...| ++.+||+|||+|
T Consensus 304 ~~~~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg 382 (502)
T TIGR01734 304 KITQEILDQYPRLPIGFAKPDMNLFIMD-EEGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAG 382 (502)
T ss_pred EccccccccCCccccccccCCCEEEEEC-CCCCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEE
Confidence 2211121234456799999999999999 578999999999999999999999999999887665 344699999999
Q ss_pred EEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeec-CCCCCceeEEEEEeCCCCCCCH----HHHH
Q 039837 425 YIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLP-DEEAGEIPAACVVMNPNAKESE----DDIM 499 (544)
Q Consensus 425 ~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~-~~~~~~~~~~~v~~~~~~~~~~----~~l~ 499 (544)
+++++ ++++.||.+|+|+++|++|+|.+||+++.++|.|.++++++.. ....++.++++++..+...... .++.
T Consensus 383 ~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~ 461 (502)
T TIGR01734 383 TITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFEKEFQLTKAIK 461 (502)
T ss_pred EEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEecccccccchhhHHHHH
Confidence 99876 9999999999999999999999999999999999999999875 4445678888888765433222 6788
Q ss_pred HHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 500 DFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 500 ~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
+.+++.++++++|..+++++++|+|++||++|++|++++.
T Consensus 462 ~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 462 KELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred HHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 8999999999999999999999999999999999999864
No 70
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.6e-65 Score=546.96 Aligned_cols=483 Identities=21% Similarity=0.272 Sum_probs=394.9
Q ss_pred CCCCHHHHHHhhhhhcCC-ceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhc
Q 039837 34 ENVTLPDFVLQDAELYAD-KVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAG 112 (544)
Q Consensus 34 ~~~~l~~~l~~~a~~~p~-~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G 112 (544)
...|+.+.|.++++++|+ ++|+.+. +.+++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G 279 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDV-NFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRR 279 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcC-CCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcC
Confidence 346899999999999998 5777653 247899999999999999999987 5999999999999999999999999999
Q ss_pred CeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhc--C-----CCcEEEecccccccccCHHHH-H---Hh--h--
Q 039837 113 GVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKG--L-----GLPIIVLGEERIESAINWSEL-I---EA--A-- 177 (544)
Q Consensus 113 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~-~---~~--~-- 177 (544)
++++|+++.++.++++++++++++++++++.+..+.... . ....+.+++. .....+... . .. .
T Consensus 280 ~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~ 357 (718)
T PRK08043 280 RIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDL--KDDVTTADKLWIFAHLLMPRL 357 (718)
T ss_pred CcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhh--hhhcchhHHHHHHHHHhCCcc
Confidence 999999999999999999999999999998775443110 0 1122222211 011111110 0 00 0
Q ss_pred --hhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceE
Q 039837 178 --DKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKV 255 (544)
Q Consensus 178 --~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~ 255 (544)
............+||||||.||||++||+++.+.+.+....+ ++..+|++++.+|++|.+|+...++.++..|+++
T Consensus 358 ~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~--~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~v 435 (718)
T PRK08043 358 AQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA--DFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEV 435 (718)
T ss_pred ccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh--CCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEE
Confidence 011123334567999999999999999999999887776665 7788999999999999999877788999999999
Q ss_pred EEcCc-cCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEec
Q 039837 256 VMMNR-FELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEA 334 (544)
Q Consensus 256 ~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~ 334 (544)
++.+. .++..+.+.+.++++|++.++|+++..+.+.. ...++++++. +++||+++++++.++|.+.| ++++++.
T Consensus 436 v~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~--i~~gg~~l~~~~~~~~~~~~-g~~l~~~ 510 (718)
T PRK08043 436 FLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRY--VVAGAEKLQESTKQLWQDKF-GLRILEG 510 (718)
T ss_pred EEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEE--EEEeCccCCHHHHHHHHHHc-CCCeecc
Confidence 98764 56778889999999999999999998887642 2345677777 99999999999999999988 8999999
Q ss_pred ccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCC--hhh-----
Q 039837 335 YGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNN--EEE----- 407 (544)
Q Consensus 335 yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~--~~~----- 407 (544)
||+||++.+++... + .....+++|+|++|++++++|. ++. ++.|||+++|++++.|||++ ++.
T Consensus 511 YG~TE~~~~~~~~~----~-~~~~~~svG~p~pg~~~~i~d~-~~~----~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~ 580 (718)
T PRK08043 511 YGVTECAPVVSINV----P-MAAKPGTVGRILPGMDARLLSV-PGI----EQGGRLQLKGPNIMNGYLRVEKPGVLEVPT 580 (718)
T ss_pred cCcccccceEEecC----C-cccCCCCCCCcCCCCeeEEecC-CCC----CCceEEEEecCCccccccCCCCcccccccc
Confidence 99999987655332 1 2335689999999999999984 332 56699999999999999983 442
Q ss_pred --hhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEE
Q 039837 408 --TARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACV 485 (544)
Q Consensus 408 --~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 485 (544)
+...+..+|||+|||+|++|+||++++.||.+|+||++|++|+|.+||+++.+++.+.+++|++.+++..++.+++++
T Consensus 581 ~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~ 660 (718)
T PRK08043 581 AENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFT 660 (718)
T ss_pred cccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEE
Confidence 222233579999999999999999999999999999999999999999999999988888899888888888877765
Q ss_pred EeCCCCCCCHHHHHHHHHhc-ccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 486 VMNPNAKESEDDIMDFVASN-VATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 486 ~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
. +...+.+++.++++++ |+.|++|..++++++||+|++||++|++|++++.+
T Consensus 661 ~---~~~~~~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 713 (718)
T PRK08043 661 T---DSELTREKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDE 713 (718)
T ss_pred c---CcccCHHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhc
Confidence 3 3446778899999987 99999999999999999999999999999998753
No 71
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.2e-65 Score=526.46 Aligned_cols=494 Identities=28% Similarity=0.414 Sum_probs=419.7
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
+.|+.++|.++++++|+++|+++. ++.+||.||.++++++|..|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~ 88 (524)
T PRK06188 11 GATYGHLLVSALKRYPDRPALVLG--DTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLR 88 (524)
T ss_pred CccHHHHHHHHHHHCCCCeEEEEC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCE
Confidence 448999999999999999999986 689999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccc-hHHHhhcCC-----Cc-EEEecccccccccCHHHHHH-hh-----hhcC
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAP-IYEKVKGLG-----LP-IIVLGEERIESAINWSELIE-AA-----DKAG 181 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~-~~-----~~~~ 181 (544)
++++++..+.+++..+++.++++.+++++. ......... .. ++.+.... .......... .. ....
T Consensus 89 ~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 166 (524)
T PRK06188 89 RTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVP--DGVDLLAAAAKFGPAPLVAAAL 166 (524)
T ss_pred EEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCcc--chhhHHHhhhccCcccccccCC
Confidence 999999999999999999999999999876 332222111 11 22222110 0000000000 00 0001
Q ss_pred CCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCcc
Q 039837 182 NNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRF 261 (544)
Q Consensus 182 ~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~ 261 (544)
......+.+||||||.||+|.+||.++...+......+ +...+++++..+|++|.+++ .++.++..|+++++.+..
T Consensus 167 ~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~--~~~~~~~~l~~~pl~~~~g~--~~~~~l~~G~~~~~~~~~ 242 (524)
T PRK06188 167 PPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEW--EWPADPRFLMCTPLSHAGGA--FFLPTLLRGGTVIVLAKF 242 (524)
T ss_pred CCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc--CCCcCcEEEEecCchhhhhH--HHHHHHHcCCEEEEcCCC
Confidence 11234567899999999999999999999888877776 77889999999999998886 357889999999999989
Q ss_pred CHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCcccc
Q 039837 262 ELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHS 341 (544)
Q Consensus 262 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~ 341 (544)
++..+++.++++++|++.++|+++..|++........+++++. +++||++++++..+.+.+.+ +..+++.||+||++
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~--~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~ 319 (524)
T PRK06188 243 DPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLET--VYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAP 319 (524)
T ss_pred CHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeE--EEEcCCCCCHHHHHHHHHHh-CchhhheeCccccC
Confidence 9999999999999999999999999999877655566777777 99999999999999998888 77899999999997
Q ss_pred ccccccCCCC-CCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeec
Q 039837 342 CITLTYGDPA-NPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHT 420 (544)
Q Consensus 342 ~~~~~~~~~~-~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~T 420 (544)
..+....... .........++|+|++++.++|+| +++++++.|+.|||+++|+.++.||++++..+...+ .+|||+|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~T 397 (524)
T PRK06188 320 MVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-EDGREVAQGEVGEICVRGPLVMDGYWNRPEETAEAF-RDGWLHT 397 (524)
T ss_pred CceeecCchhccccccccCCccccccCCcEEEEEc-CCCCCCCCCCeeEEEEECcchhhhhcCChHHhhhhh-cCCceee
Confidence 6555432111 111234567899999999999999 568999999999999999999999999999998888 6899999
Q ss_pred CceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHH
Q 039837 421 GDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMD 500 (544)
Q Consensus 421 GD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 500 (544)
||+++++++|.+++.||.+|+++++|++++|.+||++|.++++|.+++|++.++...++.+++++++.++...+.+++.+
T Consensus 398 GDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 477 (524)
T PRK06188 398 GDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAAVDAAELQA 477 (524)
T ss_pred cceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998887888999999988777778899999
Q ss_pred HHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 501 FVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 501 ~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
++++.++.+++|..++++++||+|++||++|++|+++|.+.
T Consensus 478 ~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~ 518 (524)
T PRK06188 478 HVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWEG 518 (524)
T ss_pred HHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHhh
Confidence 99999999999999999999999999999999999998543
No 72
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-64 Score=528.33 Aligned_cols=500 Identities=27% Similarity=0.413 Sum_probs=413.7
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
..++.+.|+++|+.+|+++|+.+. ++.+||.||.+++.++|.+|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 32 ~~~l~~~l~~~a~~~p~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 109 (567)
T PRK06178 32 ERPLTEYLRAWARERPQRPAIIFY--GHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAV 109 (567)
T ss_pred cccHHHHHHHHHHHCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeE
Confidence 368999999999999999999886 689999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC----CcEEEecc--ccccc----------------ccCHHH
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG----LPIIVLGE--ERIES----------------AINWSE 172 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~----~~~~~~~~--~~~~~----------------~~~~~~ 172 (544)
++|++|..+..++.+++++++++++++++...+.+.... ...+.+.. ..... ...+.+
T Consensus 110 ~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (567)
T PRK06178 110 HVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAGAID 189 (567)
T ss_pred EeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999988766554321 22221110 00000 001111
Q ss_pred HHHhhh---------hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHH
Q 039837 173 LIEAAD---------KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITG 243 (544)
Q Consensus 173 ~~~~~~---------~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~ 243 (544)
+..... ...........+||||||.||+|++||+++........... ......++++..+|++|.+|+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~g~~~ 268 (567)
T PRK06178 190 LLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVA-VVGGEDSVFLSFLPEFWIAGENF 268 (567)
T ss_pred HHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHh-ccCCCCcEEEEecchHHHHHHHH
Confidence 111110 01122334568999999999999999999987655443321 15678899999999999999877
Q ss_pred HHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHH
Q 039837 244 ICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFE 323 (544)
Q Consensus 244 ~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~ 323 (544)
.++.++..|+++++.+++++..+++.++++++|.+.++|..+..+.+.......++++++.......++.+++++.+.|.
T Consensus 269 ~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 348 (567)
T PRK06178 269 GLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQRWR 348 (567)
T ss_pred HHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHHHHH
Confidence 78889999999999998999999999999999999999999999887654444556666652233446899999999999
Q ss_pred hhcCCCeEE-ecccCccccccccccCCCCCCC--CCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEeccccccc
Q 039837 324 KKFPGVQVQ-EAYGLTEHSCITLTYGDPANPS--AGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQG 400 (544)
Q Consensus 324 ~~~~~~~i~-~~yG~tE~~~~~~~~~~~~~~~--~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~g 400 (544)
+.+ +..++ +.||+||++..+.......... .....+++|+|++|++++++|++++.+++.|+.|||+++|++++.|
T Consensus 349 ~~~-g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g~~v~~g 427 (567)
T PRK06178 349 ALT-GSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLGAEGEIVVRTPSLLKG 427 (567)
T ss_pred HHh-CCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCCCceEEEEECCccccc
Confidence 988 55555 5799999986544322111110 1234567999999999999997789999999999999999999999
Q ss_pred ccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCce
Q 039837 401 YYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEI 480 (544)
Q Consensus 401 y~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~ 480 (544)
|+++++.+...+ .+|||+|||+++++++|++++.||.+|+|+++|.+++|.+||+++.++++|.++++++.++...++.
T Consensus 428 Y~~~~~~~~~~~-~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~ 506 (567)
T PRK06178 428 YWNKPEATAEAL-RDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQV 506 (567)
T ss_pred ccCChhhhhhcc-cCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcc
Confidence 999999998777 5789999999999999999999999999999999999999999999999999999999988878888
Q ss_pred eEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 481 PAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 481 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
+++++++.++...+.+++.++++++++.+++|. +++++++|+|++||++|++|++++++
T Consensus 507 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 507 PVAFVQLKPGADLTAAALQAWCRENMAVYKVPE-IRIVDALPMTATGKVRKQDLQALAEE 565 (567)
T ss_pred eEEEEEeCCCCcCCHHHHHHHHHhcCcccCCce-EEEeccCCCCCccceeHHHHHHHHHh
Confidence 999999887767788999999999999999997 78889999999999999999998865
No 73
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-65 Score=536.33 Aligned_cols=492 Identities=18% Similarity=0.253 Sum_probs=397.9
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhc
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAG 112 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G 112 (544)
....|+.+.|.++++++|+++|+++. ++++||+||.++++++|.+|.+.|+++||+|+++++|+.+++++++||+++|
T Consensus 34 ~~~~tl~~~l~~~a~~~p~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G 111 (600)
T PRK08279 34 DSKRSLGDVFEEAAARHPDRPALLFE--DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLG 111 (600)
T ss_pred CCcccHHHHHHHHHHhCCCCcEEEeC--CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 34569999999999999999999986 6899999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----CcEEEe-cccccccccCHHHHHHhhhh-------
Q 039837 113 GVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----LPIIVL-GEERIESAINWSELIEAADK------- 179 (544)
Q Consensus 113 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~------- 179 (544)
++++++++.++.+++.++++.++++++|++.+..+.+.... ...+.. ++........+.++......
T Consensus 112 ~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (600)
T PRK08279 112 AVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAPTTNPA 191 (600)
T ss_pred cEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhcccCCccCCC
Confidence 99999999999999999999999999999987766554321 111222 11111011222222221100
Q ss_pred ----cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceE
Q 039837 180 ----AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKV 255 (544)
Q Consensus 180 ----~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~ 255 (544)
........+.+||||||.||||++||+++.+.+.+....+ ++.++++++..+|++|.+|+...++.++..|+++
T Consensus 192 ~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~--~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~ 269 (600)
T PRK08279 192 SRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLL--RLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATL 269 (600)
T ss_pred cccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhc--CCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEE
Confidence 0112234568999999999999999999999998877766 7889999999999999999977888889999999
Q ss_pred EEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecc
Q 039837 256 VMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAY 335 (544)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 335 (544)
++.+.+++..+++.++++++|++..+|+++..+++..........+ + .+++|+.++++++++|.+.|+...+++.|
T Consensus 270 v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~--l--~~~~g~~l~~~~~~~~~~~~~~~~l~~~Y 345 (600)
T PRK08279 270 ALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHR--L--RLMIGNGLRPDIWDEFQQRFGIPRILEFY 345 (600)
T ss_pred EEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcc--e--eEEecCCCCHHHHHHHHHHhCcceeeeee
Confidence 9999899999999999999999999999999998765433322333 4 23457889999999999999656799999
Q ss_pred cCccccccccccCCCCCCCCCCCCCcccccCC----CceEEEEeCC--------CC--CcCCCCCCceEE--Eecccccc
Q 039837 336 GLTEHSCITLTYGDPANPSAGSKKNSVGFILP----NLEVKFINPE--------TG--KSLPSNTPGELC--VRSQCVMQ 399 (544)
Q Consensus 336 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~----~~~~~i~d~~--------~~--~~~~~g~~Gel~--v~~~~~~~ 399 (544)
|+||++...... ....+++|.+.+ +..+...+.+ ++ ..++.|+.|||+ +.|+.++.
T Consensus 346 G~tE~~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~ 417 (600)
T PRK08279 346 AASEGNVGFINV--------FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFD 417 (600)
T ss_pred cccccceeeccc--------CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCccccc
Confidence 999988543321 123345666555 3332222211 22 357889999998 77999999
Q ss_pred cccCChhhhhccc------CCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeec
Q 039837 400 GYYNNEEETARTI------DKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLP 473 (544)
Q Consensus 400 gy~~~~~~~~~~~------~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 473 (544)
|| +++..+...+ ..++||+|||+|++++||++++.||.+|+||++|++|+|.+||++|.++|+|.+++|++++
T Consensus 418 GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V~~a~v~gv~ 496 (600)
T PRK08279 418 GY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSGFPGVEEAVVYGVE 496 (600)
T ss_pred cc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhcCCCcceEEEEEee
Confidence 99 8888877654 2468999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCC-CceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 474 DEEA-GEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 474 ~~~~-~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
++.. +...+++++..++...+.+++.++++++|+.|++|..++++++||+|.+||++|++|++++.++
T Consensus 497 ~~~~~~~~~~~~vv~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 497 VPGTDGRAGMAAIVLADGAEFDLAALAAHLYERLPAYAVPLFVRLVPELETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred cCCCCCccceeEEEecCCccCCHHHHHHHHHhhCccccCCeEEEeecCCCCCcchhhhHHHHhhcCCCc
Confidence 6543 4445566666655567889999999999999999999999999999999999999999987654
No 74
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-64 Score=525.78 Aligned_cols=493 Identities=29% Similarity=0.505 Sum_probs=409.4
Q ss_pred CCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 34 ENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 34 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
...|+.++|.++|+++|+++|+++. ++.+||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 21 ~~~~i~~~l~~~a~~~p~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~ 98 (557)
T PRK07059 21 QYPSLADLLEESFRQYADRPAFICM--GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGY 98 (557)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEEc--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCe
Confidence 3468999999999999999999986 68999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC----CCcEEEeccc-------------------------cc
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL----GLPIIVLGEE-------------------------RI 164 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~~-------------------------~~ 164 (544)
+++|+++.++.+++.++++.++++++++++.....+... ..+.+.+... ..
T Consensus 99 ~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (557)
T PRK07059 99 VVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSL 178 (557)
T ss_pred EEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccccccccccccccccccccccccCC
Confidence 999999999999999999999999999987765443321 1111111100 00
Q ss_pred ccccCHHHHHHhhhh-------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCC--c---ccCccEEEEe
Q 039837 165 ESAINWSELIEAADK-------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVP--E---MIGQVTTLGL 232 (544)
Q Consensus 165 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~--~---~~~~~~~~~~ 232 (544)
.....+.+....... ......+.+.+||||||.||+|+++|.++..++......+.. . ......++..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (557)
T PRK07059 179 PGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLNFVCA 258 (557)
T ss_pred CCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcEEEEe
Confidence 111223333222111 112233457889999999999999999998765433222110 1 1124567888
Q ss_pred cchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEec
Q 039837 233 IPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAA 311 (544)
Q Consensus 233 ~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G 311 (544)
+|++|.+++....+.++..|++.++.+ ..++..+++.++++++|.+.++|+++..+.+.......++++++. ++.||
T Consensus 259 ~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~--~~~gg 336 (557)
T PRK07059 259 LPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIV--ANGGG 336 (557)
T ss_pred CCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheE--EEecc
Confidence 999999887667777888888876655 457889999999999999999999999998876655556677777 99999
Q ss_pred CCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEE
Q 039837 312 APLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELC 391 (544)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~ 391 (544)
+++++.+.++|.+.+ ++++++.||+||++.++.... ........++|.|+++++++++| +++++++.|+.|||+
T Consensus 337 ~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~----~~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~~Gel~ 410 (557)
T PRK07059 337 MAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNP----VDATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGEPGEIC 410 (557)
T ss_pred ccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCC----CCCCCcCCcccCccCCcEEEEEC-CCCCCCCCCCceEEE
Confidence 999999999999988 899999999999987665432 11223457899999999999999 678999999999999
Q ss_pred EecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEe
Q 039837 392 VRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVS 471 (544)
Q Consensus 392 v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~ 471 (544)
++|+.++.||+++++.+...+..+|||+|||+++++++|.+++.||.+|+++++|.+++|.+||++|.++++|.+++|++
T Consensus 411 v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~~~~~V~~~~v~~ 490 (557)
T PRK07059 411 IRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVASHPGVLEVAAVG 490 (557)
T ss_pred EeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHHhCCceeEEEEEe
Confidence 99999999999999999988878999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHH
Q 039837 472 LPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDK 537 (544)
Q Consensus 472 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~ 537 (544)
.++...++.++++++... ...+.+++.++++++++.+++|..+++++++|+|.+||++|++|+++
T Consensus 491 ~~~~~~ge~~~~~v~~~~-~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 491 VPDEHSGEAVKLFVVKKD-PALTEEDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred cccCCCCeeEEEEEEeCC-CCCCHHHHHHHHHHhcccccCCcEEEEeccCCCCcccceeHHHHHhh
Confidence 998888888888888654 34677899999999999999999999999999999999999999874
No 75
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-64 Score=524.72 Aligned_cols=494 Identities=22% Similarity=0.372 Sum_probs=405.9
Q ss_pred CCHHHHHHhhhhhcCCceEEEEccC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 36 VTLPDFVLQDAELYADKVAFVEAVS--GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 36 ~~l~~~l~~~a~~~p~~~a~~~~~~--~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
.++.++|.++|..+|++.++.+... .+.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 10 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~ 89 (539)
T PRK07008 10 LLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGA 89 (539)
T ss_pred CCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCc
Confidence 4789999999999999999876422 26899999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----CcE-EEecccc-----cccccCHHHHHHhhhh---
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----LPI-IVLGEER-----IESAINWSELIEAADK--- 179 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~~-~~~~~~~-----~~~~~~~~~~~~~~~~--- 179 (544)
+++|+++.++.+++..+++.+++++++++.+..+.+.+.. +.. +.+.... ......++++......
T Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 169 (539)
T PRK07008 90 VCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGAQDGDYD 169 (539)
T ss_pred EEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhcccCCCcC
Confidence 9999999999999999999999999999887655443321 111 2221111 0112334444322111
Q ss_pred ---cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHH--hhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccce
Q 039837 180 ---AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLC--STLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGK 254 (544)
Q Consensus 180 ---~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 254 (544)
..........+||||||.||+|++||++++.... .....+ +...+++++...|++|.+++ ...+.++..|++
T Consensus 170 ~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~--~~~~~d~~l~~~p~~h~~~~-~~~~~~l~~G~~ 246 (539)
T PRK07008 170 WPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAM--GLSARDAVLPVVPMFHVNAW-GLPYSAPLTGAK 246 (539)
T ss_pred cccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhccccc--CCCCCceEEecCchHHhhhH-HHHHHHHhcCce
Confidence 1112233567999999999999999999865432 222334 67788999999999998776 445677889999
Q ss_pred EEEcC-ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEe
Q 039837 255 VVMMN-RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQE 333 (544)
Q Consensus 255 ~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~ 333 (544)
+++.. .+++..+++.++++++|++.++|+++..|++.......++++++. ++++|++++++++++|.+.+ ++.+++
T Consensus 247 ~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~--~~~~G~~l~~~~~~~~~~~~-~~~l~~ 323 (539)
T PRK07008 247 LVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRR--TVIGGSACPPAMIRTFEDEY-GVEVIH 323 (539)
T ss_pred EEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceE--EEEcCCCCCHHHHHHHHHHh-CCceec
Confidence 99864 568999999999999999999999999999876655566777776 99999999999999999988 899999
Q ss_pred cccCccccccccccCCCCCC------CCCCCCCcccccCCCceEEEEeCCCCCcCCCC--CCceEEEecccccccccCCh
Q 039837 334 AYGLTEHSCITLTYGDPANP------SAGSKKNSVGFILPNLEVKFINPETGKSLPSN--TPGELCVRSQCVMQGYYNNE 405 (544)
Q Consensus 334 ~yG~tE~~~~~~~~~~~~~~------~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~ 405 (544)
.||+||++..+......... .......++|+|++++.++|+| +++..++.+ +.|||+++|+.++.||++++
T Consensus 324 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~ 402 (539)
T PRK07008 324 AWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRYFRGD 402 (539)
T ss_pred ccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhhcCCh
Confidence 99999998755433211000 0011246789999999999999 577777653 57999999999999999988
Q ss_pred hhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEE
Q 039837 406 EETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACV 485 (544)
Q Consensus 406 ~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 485 (544)
.. .+ .+|||+|||++++++||++++.||.+|+|+.+|.+++|.+||++|.++|.|.++++++.++...++.+++++
T Consensus 403 ~~---~~-~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~~~v 478 (539)
T PRK07008 403 AS---PL-VDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPLLVV 478 (539)
T ss_pred hh---hh-cCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceEEEE
Confidence 42 23 368999999999999999999999999999999999999999999999999999999999887788889998
Q ss_pred EeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 486 VMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 486 ~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
+..++...+.+++.++++++++++++|..++++++||+|.+||++|++|+++|.+
T Consensus 479 ~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~ 533 (539)
T PRK07008 479 VKRPGAEVTREELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRD 533 (539)
T ss_pred EeCCCCccCHHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHh
Confidence 8877766788999999999999999999999999999999999999999998864
No 76
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.8e-65 Score=523.72 Aligned_cols=479 Identities=22% Similarity=0.325 Sum_probs=402.0
Q ss_pred CCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 34 ENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 34 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
...|+.+.|.++|+.+|+++|+.+. ++.+||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~--~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~ 110 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDD--DGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGA 110 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeC--CCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCe
Confidence 4678999999999999999999885 67899999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHHhhhhcCCCCCCCCCCCCC
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAADKAGNNFSNDDDVKQT 193 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsg 193 (544)
+++|+++.++.+++.++++.+++++++++++....+......+..++..... ... .............+.+|||
T Consensus 111 v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~p~~~~~~~~il~TSG 184 (516)
T PRK13383 111 DVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDAVAVIDPATAG----AEE--SGGRPAVAAPGRIVLLTSG 184 (516)
T ss_pred EEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcceEEeccchhh----hhc--CCCCCCCCCCCcEEEECCC
Confidence 9999999999999999999999999999887766655433333333211100 000 0000111222346789999
Q ss_pred CCcCcceeeccHHHHHHHH--HhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHHHH
Q 039837 194 DLWISKGVMLTHRNLVANL--CSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDALI 271 (544)
Q Consensus 194 ttG~PKgV~~t~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~ 271 (544)
|||.||+|++||....... ......+ ++..+++++..+|++|.+|+ ..++.++..|+++++...+++..+++.++
T Consensus 185 TTG~PK~v~~s~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~pl~h~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~ 261 (516)
T PRK13383 185 TTGKPKGVPRAPQLRSAVGVWVTILDRT--RLRTGSRISVAMPMFHGLGL-GMLMLTIALGGTVLTHRHFDAEAALAQAS 261 (516)
T ss_pred CCCCCCeeeecchhhhhhhhHHhHHhhh--ccCCCCeEEEecCCcchhhH-HHHHHHHhcCCEEEECCCCCHHHHHHHHH
Confidence 9999999999997432221 1112222 56788999999999999998 55677899999999988889999999999
Q ss_pred HcCceeeecchHHHHHHhcCCCC--CccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCC
Q 039837 272 THEVTFAPIVPPIILSLVKDPIV--DEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGD 349 (544)
Q Consensus 272 ~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 349 (544)
++++|.+.++|+++..|.+.... ....+++++. +++||+++++++.++|.+.| +..+++.||+||++..+....
T Consensus 262 ~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~--i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~~- 337 (516)
T PRK13383 262 LHRADAFTAVPVVLARILELPPRVRARNPLPQLRV--VMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEVGIGALATP- 337 (516)
T ss_pred HhCCcEEEecHHHHHHHHhccccccccCCCCceEE--EEECCCCCCHHHHHHHHHHc-Cchhhhcccccccccceeccc-
Confidence 99999999999999999875432 1234566666 99999999999999999999 788999999999986554332
Q ss_pred CCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCC
Q 039837 350 PANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDD 429 (544)
Q Consensus 350 ~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~ 429 (544)
.......+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||++++.. .+ .+|||+|||+|+++++
T Consensus 338 ---~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~~---~~-~~g~~~TGDl~~~d~~ 409 (516)
T PRK13383 338 ---ADLRDAPETVGKPVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTRYTDGGGK---AV-VDGMTSTGDMGYLDNA 409 (516)
T ss_pred ---cccccCCCcccCCCCCcEEEEEC-CCCCCCCCCCceEEEEecCcccccccCCchh---he-ecCceecceeEEEcCC
Confidence 11223457899999999999999 5789999999999999999999999987642 22 5799999999999999
Q ss_pred CcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCC
Q 039837 430 GDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATY 509 (544)
Q Consensus 430 g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~ 509 (544)
|++++.||.+|+||++|.+|+|.+||++|.++|.|.+++++++++...++.+.++++..++...+.+++.++++++++++
T Consensus 410 G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~ 489 (516)
T PRK13383 410 GRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSGVDAAQLRDYLKDRVSRF 489 (516)
T ss_pred ccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHHhcccC
Confidence 99999999999999999999999999999999999999999999888889999999988776677889999999999999
Q ss_pred CceeEEEEeecCCCCCCcccchHHHH
Q 039837 510 KKVRVLHFVDGIPKSHSGKIMRRILK 535 (544)
Q Consensus 510 ~~p~~~~~~~~~P~t~~GKi~r~~l~ 535 (544)
++|..++++++||+|.+||++|++|+
T Consensus 490 ~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 490 EQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred CCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 99999999999999999999999874
No 77
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=9.3e-65 Score=572.62 Aligned_cols=498 Identities=25% Similarity=0.349 Sum_probs=417.9
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhc
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAG 112 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G 112 (544)
+...++.+.+.++|+++|+++|+++. .++++||+||.++++++|+.|++ ++++||+|+++++|+++++++++||+++|
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G 689 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADS-TGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAG 689 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcC-CCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcC
Confidence 34468999999999999999999874 35799999999999999999987 48999999999999999999999999999
Q ss_pred CeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC--------CCcEEEecccccccccC---HHHHHHh-----
Q 039837 113 GVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL--------GLPIIVLGEERIESAIN---WSELIEA----- 176 (544)
Q Consensus 113 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~---~~~~~~~----- 176 (544)
++++|+++..+.+++.++++++++++++++++..+.+... ..+++..++. ...... +......
T Consensus 690 ~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 768 (1146)
T PRK08633 690 KVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDL-KAKISKVDKLTALLAARLLPA 768 (1146)
T ss_pred CEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehh-ccccchhHHHHHHHHhccCCH
Confidence 9999999999999999999999999999998776665421 1122222211 011111 1111000
Q ss_pred -------hhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhH
Q 039837 177 -------ADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATL 249 (544)
Q Consensus 177 -------~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l 249 (544)
.............+||||||.||||.+||+++.+.+......+ +..++|++++.+|++|.+|+...++.++
T Consensus 769 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~--~~~~~d~~l~~~p~~h~~g~~~~~~~~l 846 (1146)
T PRK08633 769 RLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVF--NLRNDDVILSSLPFFHSFGLTVTLWLPL 846 (1146)
T ss_pred HHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhc--CCCCCCEEEEcCcHHHHHhHHHHHHHHH
Confidence 0111223344578999999999999999999999888777766 6788999999999999999877788899
Q ss_pred hccceEEEcC-ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCC
Q 039837 250 RNKGKVVMMN-RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPG 328 (544)
Q Consensus 250 ~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~ 328 (544)
..|+++++.+ ..++..+++.++++++|++.++|++++.+.+.......+++++|. +++||+++++++.+++.+.+ +
T Consensus 847 ~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~--~~~gg~~~~~~~~~~~~~~~-g 923 (1146)
T PRK08633 847 LEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRL--VVAGAEKLKPEVADAFEEKF-G 923 (1146)
T ss_pred HCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeee--EEEcCCcCCHHHHHHHHHHh-C
Confidence 9999998866 478999999999999999999999999998866555666777777 99999999999999999998 8
Q ss_pred CeEEecccCccccccccccCCCCCC-----CCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccC
Q 039837 329 VQVQEAYGLTEHSCITLTYGDPANP-----SAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYN 403 (544)
Q Consensus 329 ~~i~~~yG~tE~~~~~~~~~~~~~~-----~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~ 403 (544)
+++++.||+||++.+++........ ......+++|+|+|+++++|+|++++++++.|+.|||+++|+.++.||++
T Consensus 924 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~ 1003 (1146)
T PRK08633 924 IRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLG 1003 (1146)
T ss_pred CCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccC
Confidence 9999999999998766543211100 01235678999999999999998889999999999999999999999999
Q ss_pred ChhhhhcccCC---CCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCC--CccceEEEeecCCCCC
Q 039837 404 NEEETARTIDK---NGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHP--SVEDAAVVSLPDEEAG 478 (544)
Q Consensus 404 ~~~~~~~~~~~---~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~--~v~~~~v~~~~~~~~~ 478 (544)
+|+.+.+.+.. ++||+|||+|++|+||++++.||.||++|++|++|+|.+||++|.+|| .+.+++|++++++..|
T Consensus 1004 ~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g 1083 (1146)
T PRK08633 1004 DPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKG 1083 (1146)
T ss_pred CccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCC
Confidence 99998877732 389999999999999999999999999999999999999999999998 4667999999998889
Q ss_pred ceeEEEEEeCCCCCCCHHHHHHHHHh-cccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 479 EIPAACVVMNPNAKESEDDIMDFVAS-NVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 479 ~~~~~~v~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
+.++++++. ...+.+++++++++ .++.+++|..+++++++|+|++||++|++|+++.++.
T Consensus 1084 ~~~~~~v~~---~~~~~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1084 EKLVVLHTC---GAEDVEELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred cEEEEEEec---CccCHHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 998888875 24567889988875 6999999999999999999999999999999986553
No 78
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-64 Score=521.95 Aligned_cols=496 Identities=24% Similarity=0.365 Sum_probs=406.8
Q ss_pred CCCCHHHHHHhhhhhcCCceEEEEccC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHh
Q 039837 34 ENVTLPDFVLQDAELYADKVAFVEAVS--GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAA 111 (544)
Q Consensus 34 ~~~~l~~~l~~~a~~~p~~~a~~~~~~--~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~ 111 (544)
.+.|+.++|+++|+++|++++++.... .+++||+||.++++++|++|++.|+++||+|+++++|+++++++++||+++
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~ 87 (542)
T PRK06018 8 WPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGI 87 (542)
T ss_pred CCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhc
Confidence 457999999999999999999985322 378999999999999999999999999999999999999999999999999
Q ss_pred cCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC-----CCc-EEEecccc------cccccCHHHHHHhhhh
Q 039837 112 GGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL-----GLP-IIVLGEER------IESAINWSELIEAADK 179 (544)
Q Consensus 112 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~~~~~~~~------~~~~~~~~~~~~~~~~ 179 (544)
|++++|+++.++.+++..+++.+++++++++.+....+.+. ... ++.+.+.. ......+.++......
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (542)
T PRK06018 88 GAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIAEADG 167 (542)
T ss_pred CeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHhccCCc
Confidence 99999999999999999999999999999988765544321 122 22222111 0112234443322111
Q ss_pred c------CCCCCCCCCCCCCCCcCcceeeccHHHHH-HH-HHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhc
Q 039837 180 A------GNNFSNDDDVKQTDLWISKGVMLTHRNLV-AN-LCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRN 251 (544)
Q Consensus 180 ~------~~~~~~~~~~tsgttG~PKgV~~t~~~l~-~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~ 251 (544)
. .........+||||||.||||++||++.. +. .......+ ++..+++++...|++|.+++. ..+.++..
T Consensus 168 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~p~~h~~~~~-~~~~~~~~ 244 (542)
T PRK06018 168 DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDAL--GTSAADTMLPVVPLFHANSWG-IAFSAPSM 244 (542)
T ss_pred ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhc--CCCCCCEEEEecCHHHHhhhH-HHHhhhhc
Confidence 1 11223356789999999999999999743 22 22223333 677889999999999998874 44567889
Q ss_pred cceEEEcC-ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCe
Q 039837 252 KGKVVMMN-RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQ 330 (544)
Q Consensus 252 G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~ 330 (544)
|+++++.. .+++..+++.++++++|++.++|+++..|.+.......++++++. ++++|+++++++.++|++ + +++
T Consensus 245 g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~--~~~~G~~l~~~~~~~~~~-~-~~~ 320 (542)
T PRK06018 245 GTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKM--VVCGGSAMPRSMIKAFED-M-GVE 320 (542)
T ss_pred CceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceE--EEEcCCCCCHHHHHHHHH-h-CCC
Confidence 99998864 568899999999999999999999999998776555556677777 999999999999999999 6 899
Q ss_pred EEecccCccccccccccCCCCCCC------CCCCCCcccccCCCceEEEEeCCCCCcCCCC--CCceEEEeccccccccc
Q 039837 331 VQEAYGLTEHSCITLTYGDPANPS------AGSKKNSVGFILPNLEVKFINPETGKSLPSN--TPGELCVRSQCVMQGYY 402 (544)
Q Consensus 331 i~~~yG~tE~~~~~~~~~~~~~~~------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~~~~~~~gy~ 402 (544)
+++.||+||++.++.......... ......++|+|.++++++|+| ++++.++.+ ..|||+++|+.++.|||
T Consensus 321 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~gy~ 399 (542)
T PRK06018 321 VRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAAAYY 399 (542)
T ss_pred eEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcchhhh
Confidence 999999999987665432111100 011235789999999999999 577777653 67999999999999999
Q ss_pred CChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeE
Q 039837 403 NNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPA 482 (544)
Q Consensus 403 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 482 (544)
+. +...++.++||+|||+++++++|++++.||.+|+++++|.++++.+||+++.++|+|.+++|++.++...++.+.
T Consensus 400 ~~---~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 476 (542)
T PRK06018 400 RV---DGEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERPL 476 (542)
T ss_pred cC---cccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCceeE
Confidence 83 234456789999999999999999999999999999999999999999999999999999999999888788899
Q ss_pred EEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 483 ACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 483 ~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
+++++.++...+.+++.++++++++.+++|..++++++||+|.+||++|++|+++|.+
T Consensus 477 ~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 534 (542)
T PRK06018 477 LIVQLKPGETATREEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKD 534 (542)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 9999888777788999999999999999999999999999999999999999999865
No 79
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.6e-65 Score=529.42 Aligned_cols=487 Identities=18% Similarity=0.251 Sum_probs=376.8
Q ss_pred CC-HHHHHHhhhhhcCCceEEEEccCC--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhc
Q 039837 36 VT-LPDFVLQDAELYADKVAFVEAVSG--KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAG 112 (544)
Q Consensus 36 ~~-l~~~l~~~a~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G 112 (544)
|| +.+.|+++|+++|+++|+++.+.+ +++||+||.++++++|++|.+. ++||+|+++++|+++++++++||+++|
T Consensus 1 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G 78 (525)
T PRK05851 1 MNELAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAG 78 (525)
T ss_pred CchHHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcC
Confidence 34 788999999999999999986322 7899999999999999999987 799999999999999999999999999
Q ss_pred CeeecCCCC-------CCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHHhhhhcCCCCC
Q 039837 113 GVFSGANPT-------AHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAADKAGNNFS 185 (544)
Q Consensus 113 ~~~v~l~~~-------~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (544)
+++++++.. ...+++.+++..+++++++++....+.+......+ .+.+.......... ...........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~d~ 154 (525)
T PRK05851 79 AAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSSV-TVHDLATAAHTNRS---ASLTPPDSGGP 154 (525)
T ss_pred CCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhccc-cccccccccccccc---ccCCCCCCCCe
Confidence 986544311 22345567789999999999877655443321111 11000000000000 00001122334
Q ss_pred CCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCccc-CccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc--c-
Q 039837 186 NDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMI-GQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR--F- 261 (544)
Q Consensus 186 ~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~- 261 (544)
..+.+||||||.||||++||+++.+.+......+ +.. .+++++.++|++|.+|+ ..++.++..|+++++.+. +
T Consensus 155 a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~--~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~~~~~~~~~~~~ 231 (525)
T PRK05851 155 AVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV--GLDAATDVGCSWLPLYHDMGL-AFLLTAALAGAPLWLAPTTAFS 231 (525)
T ss_pred EEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh--CCCCCCCeEEEcCCCccCccH-HHHHHHHHcCCeEEEcCHHHHH
Confidence 4678999999999999999999999888777666 667 88999999999999998 467889999999999763 3
Q ss_pred -CHHHHHHHHHHcCceeeecchHHHHHHhcCCC-CCccCccccccccEEEecCCCCHhHHHHHHhh---c--CCCeEEec
Q 039837 262 -ELRAFLDALITHEVTFAPIVPPIILSLVKDPI-VDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKK---F--PGVQVQEA 334 (544)
Q Consensus 262 -~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~---~--~~~~i~~~ 334 (544)
++..+++.+.++++|++...|.++..+.+... ....++++++. +++||+++++++.++|.+. + ++..+++.
T Consensus 232 ~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~--~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~ 309 (525)
T PRK05851 232 ASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRV--ALNGGEPVDCDGFERFATAMAPFGFDAGAAAPS 309 (525)
T ss_pred HCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhhe--eEeccccCCHHHHHHHHHHHhhcCCChhhcccc
Confidence 57789999999999988655544444433221 12345667777 9999999999999999875 2 23469999
Q ss_pred ccCccccccccccCCCC----------CCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCC
Q 039837 335 YGLTEHSCITLTYGDPA----------NPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNN 404 (544)
Q Consensus 335 yG~tE~~~~~~~~~~~~----------~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~ 404 (544)
||+||++..+....... +.......+++|+|++|++++|+|++.+.+++.|+.|||+++|++++.|||++
T Consensus 310 YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~ 389 (525)
T PRK05851 310 YGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQ 389 (525)
T ss_pred cchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhccccC
Confidence 99999976554321100 00011234679999999999999965556789999999999999999999998
Q ss_pred hhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEE
Q 039837 405 EEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAAC 484 (544)
Q Consensus 405 ~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~ 484 (544)
++.+ .++||+|||+|+++ +|.++++||.||+||++|++|+|.+||++|.+||+|.+++|++++++..++.+.++
T Consensus 390 ~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~ 463 (525)
T PRK05851 390 APID-----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLV 463 (525)
T ss_pred CccC-----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEE
Confidence 8643 57899999999996 89999999999999999999999999999999999999999999887777777666
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccCC--CceeEEEEee--cCCCCCCcccchHHHHHHHHH
Q 039837 485 VVMNPNAKESEDDIMDFVASNVATY--KKVRVLHFVD--GIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 485 v~~~~~~~~~~~~l~~~l~~~l~~~--~~p~~~~~~~--~~P~t~~GKi~r~~l~~~~~~ 540 (544)
++... ...+.+++.++++++++.+ ++|..+++++ +||+|++||++|++|++.+++
T Consensus 464 v~~~~-~~~~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 464 IAAEF-RGPDEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred EEEEe-cCcchHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcchHHHHHHHHHHHHh
Confidence 65432 2235567777888888776 8999999998 899999999999999998854
No 80
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=6.5e-65 Score=533.60 Aligned_cols=491 Identities=20% Similarity=0.226 Sum_probs=391.6
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEcc---CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHh
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAV---SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAA 111 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~---~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~ 111 (544)
..|+.+.|.++++++|+++|+.+.. +.+++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++
T Consensus 38 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~ 117 (614)
T PRK08180 38 PRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYA 117 (614)
T ss_pred CccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence 5689999999999999999998641 1268999999999999999999999999999999999999999999999999
Q ss_pred cCeeecCCCCCC-----HHHHHHHHHhcCceEEEeccc--hHHHhhcC---CCcEEEecccc-cccccCHHHHHHhhh--
Q 039837 112 GGVFSGANPTAH-----ASELKKQVDAADAKLIVSYAP--IYEKVKGL---GLPIIVLGEER-IESAINWSELIEAAD-- 178 (544)
Q Consensus 112 G~~~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~--~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~-- 178 (544)
|++++|+++.++ .+++.+++++++++++|++.. ....+... ....+..+... ......+..+.....
T Consensus 118 Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 197 (614)
T PRK08180 118 GVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVPGRAATPFAALLATPPTA 197 (614)
T ss_pred CCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCCCcccccHHHHhcccccc
Confidence 999999999998 789999999999999999754 22222211 22233322111 011234444432210
Q ss_pred -------hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhc
Q 039837 179 -------KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRN 251 (544)
Q Consensus 179 -------~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~ 251 (544)
.........+.+||||||.||||++||+++.+.+......+.......+++++++|++|.+|+...++.++..
T Consensus 198 ~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~ 277 (614)
T PRK08180 198 AVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNLGIVLYN 277 (614)
T ss_pred chhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHHHHHHhc
Confidence 1112334467899999999999999999999888776655521112568999999999999987788889999
Q ss_pred cceEEEcCc-cC---HHHHHHHHHHcCceeeecchHHHHHHhcCCC----CCccCccccccccEEEecCCCCHhHHHHHH
Q 039837 252 KGKVVMMNR-FE---LRAFLDALITHEVTFAPIVPPIILSLVKDPI----VDEFDLSKLQLRAVMTAAAPLAPDLLSSFE 323 (544)
Q Consensus 252 G~~~~~~~~-~~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~ 323 (544)
|+++++.+. ++ ...+++.++++++|+++++|+++..|++... .....+++++. +++||+++++++.+++.
T Consensus 278 G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~--v~~gGa~l~~~~~~~~~ 355 (614)
T PRK08180 278 GGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKL--LFYAGAALSQDVWDRLD 355 (614)
T ss_pred CCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeE--EEEccCCCCHHHHHHHH
Confidence 999998752 33 3467888999999999999999998876422 12234567777 99999999999999998
Q ss_pred hh----c-CCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEeccccc
Q 039837 324 KK----F-PGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVM 398 (544)
Q Consensus 324 ~~----~-~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~ 398 (544)
+. + .++.+++.||+||++.+++.... .....+++|+|++|++++++|+ |..|||+++|++++
T Consensus 356 ~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-----~~~~~~svG~p~pg~~v~i~d~--------~~~GEi~vrg~~v~ 422 (614)
T PRK08180 356 RVAEATCGERIRMMTGLGMTETAPSATFTTG-----PLSRAGNIGLPAPGCEVKLVPV--------GGKLEVRVKGPNVT 422 (614)
T ss_pred HHHHhhcCCCceeeeeecccccCCceEeccc-----ccCCCCcccCccCCcEEEEecC--------CCCcEEEEecCccc
Confidence 75 3 24789999999999876654321 2345678999999999999983 34599999999999
Q ss_pred ccccCChhhhhcccCCCCeeecCceEEE----cCCCcEEEEeecCCceee-cceeeC--hHHHHHHHhcCCCccceEEEe
Q 039837 399 QGYYNNEEETARTIDKNGWLHTGDIGYI----DDDGDIFIVDRIKELIKY-KGFQVA--PAELEAILLTHPSVEDAAVVS 471 (544)
Q Consensus 399 ~gy~~~~~~~~~~~~~~~~~~TGD~~~~----~~~g~~~~~GR~~d~i~~-~G~~v~--~~~iE~~l~~~~~v~~~~v~~ 471 (544)
.|||++|+.|...|+.+|||+|||+|++ +++|++++.||.+|+|++ +|++++ +.++|.++.+||.|.+++|++
T Consensus 423 ~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g 502 (614)
T PRK08180 423 PGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITG 502 (614)
T ss_pred hhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEc
Confidence 9999999999999988999999999999 468999999999999986 798776 778889999999999999999
Q ss_pred ecCCCCCceeEEEEEeCCCC---------------CCCHHHHHHHHHhcccCCC--------ceeEEEEeecCCCCC---
Q 039837 472 LPDEEAGEIPAACVVMNPNA---------------KESEDDIMDFVASNVATYK--------KVRVLHFVDGIPKSH--- 525 (544)
Q Consensus 472 ~~~~~~~~~~~~~v~~~~~~---------------~~~~~~l~~~l~~~l~~~~--------~p~~~~~~~~~P~t~--- 525 (544)
.+++ .+.++|++.++. ..+.+++.+++++.|..++ +|..+++++++|++.
T Consensus 503 ~~~~----~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk 578 (614)
T PRK08180 503 HDRD----EIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQATGSSTRVARALLLDEPPSLDAGE 578 (614)
T ss_pred CCCC----ceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhheeEEEEecCCCCCccCc
Confidence 8765 567888776541 1244678888888877766 899999999888864
Q ss_pred ---CcccchHHHHHHHHHhhhC
Q 039837 526 ---SGKIMRRILKDKMLEKMRK 544 (544)
Q Consensus 526 ---~GKi~r~~l~~~~~~~~~~ 544 (544)
+||++|+++.+.|+++|++
T Consensus 579 ~t~~~~~~R~~~~~~y~~~i~~ 600 (614)
T PRK08180 579 ITDKGYINQRAVLARRAALVEA 600 (614)
T ss_pred cCccccccHHHHHHHhHHHHHH
Confidence 5688999999999999864
No 81
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-64 Score=520.55 Aligned_cols=480 Identities=25% Similarity=0.378 Sum_probs=389.5
Q ss_pred HhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCC
Q 039837 43 LQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTA 122 (544)
Q Consensus 43 ~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 122 (544)
..+|+++|+++|+++..+++++||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++++++.+
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~ 83 (501)
T PRK13390 4 GTHAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHL 83 (501)
T ss_pred chhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCC
Confidence 35678899999998764568999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCceEEEeccchHHHhhcCC--CcE-EEecccccccccCHHHHHHhhhhc--CCCCCCCCCCCCCCCcC
Q 039837 123 HASELKKQVDAADAKLIVSYAPIYEKVKGLG--LPI-IVLGEERIESAINWSELIEAADKA--GNNFSNDDDVKQTDLWI 197 (544)
Q Consensus 123 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~tsgttG~ 197 (544)
+.+++.+++..+++++++++........... ... +.+. ........++......... .......+.+||||||.
T Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~ 162 (501)
T PRK13390 84 TAPEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFG-GEIDGFGSFEAALAGAGPRLTEQPCGAVMLYSSGTTGF 162 (501)
T ss_pred CHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEec-CcccccccHHHHhcccCCCCCCCcccEEEEeCCCCCCC
Confidence 9999999999999999999876543322211 111 1111 1111112233222211110 11122467899999999
Q ss_pred cceeec--cHHHHHHHHH----hhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHHHH
Q 039837 198 SKGVML--THRNLVANLC----STLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDALI 271 (544)
Q Consensus 198 PKgV~~--t~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~ 271 (544)
||||++ +|.++..... .....+ .+...++++..+|++|.+++... +..+..|+++++.+.+++..+++.++
T Consensus 163 PKgV~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~h~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~ 239 (501)
T PRK13390 163 PKGIQPDLPGRDVDAPGDPIVAIARAFY--DISESDIYYSSAPIYHAAPLRWC-SMVHALGGTVVLAKRFDAQATLGHVE 239 (501)
T ss_pred CCEEEeeccccccccchhhhHhhHHHHh--CCCCCCeEEecccchhhhHHHHH-HHHHhcCceEEEcCCcCHHHHHHHHH
Confidence 999995 5555443211 111223 56788999999999999887443 34567899999988889999999999
Q ss_pred HcCceeeecchHHHHHHhcCCCC--CccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCC
Q 039837 272 THEVTFAPIVPPIILSLVKDPIV--DEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGD 349 (544)
Q Consensus 272 ~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 349 (544)
++++|++.++|+++..|++.... ...++++++. ++.+|+++++++.+.+.+.+ +..+++.||+||++.++....
T Consensus 240 ~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~--v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~- 315 (501)
T PRK13390 240 RYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRA--VIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMTFIDS- 315 (501)
T ss_pred HcCCeEEEecHHHHHHHHhccchhcccCChhhhhe--EEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceEEecc-
Confidence 99999999999999998865432 2344566666 99999999999999999987 788999999999986543321
Q ss_pred CCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCC--CCeeecCceEEEc
Q 039837 350 PANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDK--NGWLHTGDIGYID 427 (544)
Q Consensus 350 ~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~--~~~~~TGD~~~~~ 427 (544)
.......+++|+|+++ .++++| +++++++.|+.|||+++|++++.||+++++.+...+.. ++|++|||+|+++
T Consensus 316 ---~~~~~~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~ 390 (501)
T PRK13390 316 ---PDWLAHPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVD 390 (501)
T ss_pred ---hhhccCCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEEC
Confidence 1122345689999999 799999 68899999999999999999999999999999877643 6799999999999
Q ss_pred CCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCC---HHHHHHHHHh
Q 039837 428 DDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKES---EDDIMDFVAS 504 (544)
Q Consensus 428 ~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~ 504 (544)
++|.+++.||.+|++|++|.+|+|.+||++|.++|.|.+++|+++++...++.+++++++.++...+ .+++.+++++
T Consensus 391 ~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~~~~ 470 (501)
T PRK13390 391 EDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIRGSDELARELIDYTRS 470 (501)
T ss_pred CCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCCcchhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888888999998877654333 3688999999
Q ss_pred cccCCCceeEEEEeecCCCCCCcccchHHHH
Q 039837 505 NVATYKKVRVLHFVDGIPKSHSGKIMRRILK 535 (544)
Q Consensus 505 ~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~ 535 (544)
+|+.+++|..++++++||+|++||++|++|+
T Consensus 471 ~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 471 RIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred hcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 9999999999999999999999999999874
No 82
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.1e-64 Score=525.14 Aligned_cols=501 Identities=22% Similarity=0.352 Sum_probs=407.5
Q ss_pred CCCCHHHHHHhhhhhcCCceEEEEc-cCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHHHh
Q 039837 34 ENVTLPDFVLQDAELYADKVAFVEA-VSGKAYTYAQVARDTRGFAKALRS-LGLRKGQVVIVVLPNVAEYGIVALGIMAA 111 (544)
Q Consensus 34 ~~~~l~~~l~~~a~~~p~~~a~~~~-~~~~~~Ty~el~~~~~~la~~L~~-~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~ 111 (544)
.++|+.++|+.+|..+|+++|+++. .+++.+||+||.+++.++|.+|.+ .|+++||+|+++++|+.+++++++||+++
T Consensus 8 ~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~ 87 (576)
T PRK05620 8 VPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACM 87 (576)
T ss_pred CCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhc
Confidence 3468999999999999999998764 234789999999999999999986 79999999999999999999999999999
Q ss_pred cCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----Cc-EEEeccccc----------ccccCHHHHHH
Q 039837 112 GGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----LP-IIVLGEERI----------ESAINWSELIE 175 (544)
Q Consensus 112 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~-~~~~~~~~~----------~~~~~~~~~~~ 175 (544)
|++++++++.++.+++.++++.++++++|+++...+.+.+.. .+ ++.++.... .....+..+..
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 167 (576)
T PRK05620 88 GAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLD 167 (576)
T ss_pred CCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHhh
Confidence 999999999999999999999999999999987665543321 12 222221110 11223555543
Q ss_pred hhhh------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhH
Q 039837 176 AADK------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATL 249 (544)
Q Consensus 176 ~~~~------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l 249 (544)
.... ..........+||||||.||||++||+++..............+..+++++..+|++|.+++ ...+.++
T Consensus 168 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~-~~~~~~l 246 (576)
T PRK05620 168 GRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSW-GVPLAAF 246 (576)
T ss_pred cCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhh-HHHHHHH
Confidence 2111 01122345678999999999999999998665443221111267788999999999999998 4567889
Q ss_pred hccceEEEcC-ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCC
Q 039837 250 RNKGKVVMMN-RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPG 328 (544)
Q Consensus 250 ~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~ 328 (544)
..|+++++.. .+++..+++.++++++|++.++|+++..|+...........+++. +++||+++++++.++|.+.+ +
T Consensus 247 ~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~--~~~gG~~~~~~~~~~~~~~~-~ 323 (576)
T PRK05620 247 MSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQE--IYVGGSAVPPILIKAWEERY-G 323 (576)
T ss_pred hcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeE--EEEcCCCCCHHHHHHHHHHh-C
Confidence 9999998875 578999999999999999999999999887654322333345555 99999999999999999988 7
Q ss_pred CeEEecccCccccccccccCCCCCCC---CCCCCCcccccCCCceEEEEeCCCCCcCC--CCCCceEEEecccccccccC
Q 039837 329 VQVQEAYGLTEHSCITLTYGDPANPS---AGSKKNSVGFILPNLEVKFINPETGKSLP--SNTPGELCVRSQCVMQGYYN 403 (544)
Q Consensus 329 ~~i~~~yG~tE~~~~~~~~~~~~~~~---~~~~~~~~G~~~~~~~~~i~d~~~~~~~~--~g~~Gel~v~~~~~~~gy~~ 403 (544)
+++++.||+||++..+.......... ......+.|++.++++++++| + +..++ ++..|||+++|+.++.|||+
T Consensus 324 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY~~ 401 (576)
T PRK05620 324 VDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASYYH 401 (576)
T ss_pred CceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccccC
Confidence 89999999999987655432111000 011234789999999999998 4 66553 57889999999999999999
Q ss_pred Chhhh----------------hcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccce
Q 039837 404 NEEET----------------ARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDA 467 (544)
Q Consensus 404 ~~~~~----------------~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 467 (544)
+++.+ ...+..++||+|||++++++||.+++.||.+|+|+.+|.++++.+||++|.++|.|.++
T Consensus 402 ~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v~~~ 481 (576)
T PRK05620 402 SPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAAPEVVEC 481 (576)
T ss_pred CccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhcCCCceEE
Confidence 99877 23344678999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCceeEEEEEeCCCCC---CCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 468 AVVSLPDEEAGEIPAACVVMNPNAK---ESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 468 ~v~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
+|++.++...|+.+++++++.++.. .+.++++++++++|+++++|..++++++||+|.+||++|++|++++.+
T Consensus 482 ~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r~~L~~~~~~ 557 (576)
T PRK05620 482 AVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDKKDLRQHLAD 557 (576)
T ss_pred EEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCcHHHHHHHHhc
Confidence 9999998888889999998877643 356899999999999999999999999999999999999999999874
No 83
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=8.6e-65 Score=532.94 Aligned_cols=495 Identities=22% Similarity=0.365 Sum_probs=386.0
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEcc-------CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHH
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEAV-------SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVA 105 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~ 105 (544)
+..+|+.+++.++++.+|+++|+++.+ ..+.+||+||.++++++|++|.+. +++||+|+++++|++++++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~ 109 (612)
T PRK12476 31 PPGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGF 109 (612)
T ss_pred CccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHH
Confidence 445789999999999999999998632 124899999999999999999986 999999999999999999999
Q ss_pred HHHHHhcCeeecC-CCCCC--HHHHHHHHHhcCceEEEeccchHHHhhcC----C----CcEEEecccccccccCHHHHH
Q 039837 106 LGIMAAGGVFSGA-NPTAH--ASELKKQVDAADAKLIVSYAPIYEKVKGL----G----LPIIVLGEERIESAINWSELI 174 (544)
Q Consensus 106 lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~ 174 (544)
+||+++|++++|+ ++.++ .+++.++++.+++++++++++....+... . ..++.++....... ...
T Consensus 110 lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~- 185 (612)
T PRK12476 110 FAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIPDSAG---ESF- 185 (612)
T ss_pred HHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEecccccccc---ccc-
Confidence 9999999999999 57766 78999999999999999987765544321 1 12222221100000 000
Q ss_pred HhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCc-ccCccEEEEecchhHHHHHHHHHHhhHhccc
Q 039837 175 EAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPE-MIGQVTTLGLIPFFHIYGITGICCATLRNKG 253 (544)
Q Consensus 175 ~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~ 253 (544)
.. ..........+.+||||||.||||++||+++.+++......+ + +.+++++++++|++|.+|+...++.++..|.
T Consensus 186 ~~-~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~--~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~ 262 (612)
T PRK12476 186 VP-VELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSI--DLLDRNTHGVSWLPLYHDMGLSMIGFPAVYGGH 262 (612)
T ss_pred cC-CCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHh--ccCCCCceEEEeCCcccccchHHHHHHHhcCCe
Confidence 00 011122334678999999999999999999988776655444 4 5678899999999999998655555555555
Q ss_pred eEEEcC-cc--CHHHHHHHHH--HcCceeeecchHHHHHHhcCCC----CCccCccccccccEEEecCCCCHhHHHHHHh
Q 039837 254 KVVMMN-RF--ELRAFLDALI--THEVTFAPIVPPIILSLVKDPI----VDEFDLSKLQLRAVMTAAAPLAPDLLSSFEK 324 (544)
Q Consensus 254 ~~~~~~-~~--~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~----~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~ 324 (544)
++++.+ .+ ++..+++.++ +++++.+..+|+++..++.... ....++++ +| +++||+++++++.++|.+
T Consensus 263 ~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~--lr-~~~gg~~~~~~~~~~~~~ 339 (612)
T PRK12476 263 STLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSN--VV-LIIGSEPVSIDAVTTFNK 339 (612)
T ss_pred EEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhH--he-EEecccCCCHHHHHHHHH
Confidence 444443 23 7889999995 4899999999999888775321 11223444 45 899999999999999998
Q ss_pred hc-----CCCeEEecccCccccccccccCCCCCC----------------------CCCCCCCcccccCCCceEEEEeCC
Q 039837 325 KF-----PGVQVQEAYGLTEHSCITLTYGDPANP----------------------SAGSKKNSVGFILPNLEVKFINPE 377 (544)
Q Consensus 325 ~~-----~~~~i~~~yG~tE~~~~~~~~~~~~~~----------------------~~~~~~~~~G~~~~~~~~~i~d~~ 377 (544)
.| |...+++.||+||++..++........ ......+++|+|+++++++|+|++
T Consensus 340 ~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~ 419 (612)
T PRK12476 340 AFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPD 419 (612)
T ss_pred HHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCC
Confidence 87 234699999999987554332110000 001123578999999999999965
Q ss_pred CCCcCCCCCCceEEEecccccccccCChhhhhcccC------------------CCCeeecCceEEEcCCCcEEEEeecC
Q 039837 378 TGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTID------------------KNGWLHTGDIGYIDDDGDIFIVDRIK 439 (544)
Q Consensus 378 ~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~------------------~~~~~~TGD~~~~~~~g~~~~~GR~~ 439 (544)
++.+++.|+.|||+++|++++.|||++|+.|.+.|. .++||+|||+|++ .||+++++||.+
T Consensus 420 ~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~-~dG~l~i~GR~~ 498 (612)
T PRK12476 420 TGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVY-LDGELYITGRIA 498 (612)
T ss_pred CCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeecccccee-ECCEEEEEeccC
Confidence 599999999999999999999999999999988773 1359999999998 599999999999
Q ss_pred CceeecceeeChHHHHHHHhc-CCCccc--eEEEeecCCCCCceeEEEEEeCCCCC-CCHHHHHHHHHhccc-CCCc-ee
Q 039837 440 ELIKYKGFQVAPAELEAILLT-HPSVED--AAVVSLPDEEAGEIPAACVVMNPNAK-ESEDDIMDFVASNVA-TYKK-VR 513 (544)
Q Consensus 440 d~i~~~G~~v~~~~iE~~l~~-~~~v~~--~~v~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~l~~~l~-~~~~-p~ 513 (544)
|+||++|++|+|.+||++|.+ ||.|.+ ++|++++++. ++.+++++++.++.. .+.+++.+++++++. .+++ |.
T Consensus 499 d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~ 577 (612)
T PRK12476 499 DLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSRADPAPAIDAIRAAVSRRHGLAVA 577 (612)
T ss_pred cEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcccccHHHHHHHHHHHHHHhhCCcce
Confidence 999999999999999999985 799999 6777877766 788899988876543 567888999998887 4777 57
Q ss_pred EEEEee--cCCCCCCcccchHHHHHHHHH
Q 039837 514 VLHFVD--GIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 514 ~~~~~~--~~P~t~~GKi~r~~l~~~~~~ 540 (544)
.+++++ +||+|++|||+|++|+++|.+
T Consensus 578 ~v~~v~~~~lP~t~~GKi~r~~L~~~~~~ 606 (612)
T PRK12476 578 DVRLVPAGAIPRTTSGKLARRACRAQYLD 606 (612)
T ss_pred EEEEECCCCcCcCCchHHHHHHHHHHHHc
Confidence 787876 699999999999999999864
No 84
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1e-63 Score=521.36 Aligned_cols=492 Identities=29% Similarity=0.473 Sum_probs=405.7
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALR-SLGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~-~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
..++.+.|.++++.+|+++|+++. ++.+||+||.+++.++|+.|. +.|+++||+|+++++|+.+++++++||+++|+
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 101 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSF--GKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGL 101 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEEC--CceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCe
Confidence 358999999999999999999975 789999999999999999997 68999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC----CCcEEEe-cccc-------------------------
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL----GLPIIVL-GEER------------------------- 163 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~-~~~~------------------------- 163 (544)
+++|++|.++.+++.+++++++++++++++.....+... ....+.. +...
T Consensus 102 ~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (560)
T PRK08751 102 TVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEYR 181 (560)
T ss_pred EEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhccccccC
Confidence 999999999999999999999999999987665443321 1111111 1000
Q ss_pred cccccCHHHHHHhhhhc-------CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCC--cccC-ccEEEEec
Q 039837 164 IESAINWSELIEAADKA-------GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVP--EMIG-QVTTLGLI 233 (544)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~--~~~~-~~~~~~~~ 233 (544)
......+.+........ .........+||||||.||+|.+||+++...+......+.. .... .++++..+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (560)
T PRK08751 182 INGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVITAL 261 (560)
T ss_pred CCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEEec
Confidence 00111222222211100 11122345789999999999999999998877655443311 1223 35778889
Q ss_pred chhHHHHHHHHHHhhHhccceEEEc-CccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecC
Q 039837 234 PFFHIYGITGICCATLRNKGKVVMM-NRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAA 312 (544)
Q Consensus 234 p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~ 312 (544)
|++|.+++....+.++..|++.++. +..++..+++.++++++|++.++|.++..+.+.......++++++. +++||+
T Consensus 262 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~--v~~gG~ 339 (560)
T PRK08751 262 PLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKM--TLGGGM 339 (560)
T ss_pred ChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhhee--eeeCCC
Confidence 9999999866566666677766654 4568899999999999999999999999999876555556777777 999999
Q ss_pred CCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEE
Q 039837 313 PLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCV 392 (544)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v 392 (544)
++++++.++|++.+ ++.+++.||+||++..+..... ......+++|.|++++.++++| +++.+++.|+.|||++
T Consensus 340 ~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~----~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v 413 (560)
T PRK08751 340 AVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPL----TLKEYNGSIGLPIPSTDACIKD-DAGTVLAIGEIGELCI 413 (560)
T ss_pred CCCHHHHHHHHHHh-CCeEEEeeccccCCCceecccc----cccccCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEE
Confidence 99999999999988 8899999999999876554321 1223456799999999999999 6889999999999999
Q ss_pred ecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEee
Q 039837 393 RSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSL 472 (544)
Q Consensus 393 ~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~ 472 (544)
+|+.++.||+++++.+...++.+|||+|||+|+++++|.+++.||.+|+|+++|.+++|.+||++|..+++|.+++|+++
T Consensus 414 ~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~ 493 (560)
T PRK08751 414 KGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMMPGVLEVAAVGV 493 (560)
T ss_pred ecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhCcCeeeeEEEec
Confidence 99999999999999999888788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHH
Q 039837 473 PDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDK 537 (544)
Q Consensus 473 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~ 537 (544)
++...++.++++++.. +...+.+++.++++++++.+++|..++++++||+|.+||++|++|++.
T Consensus 494 ~~~~~ge~~~~~v~~~-~~~~~~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 494 PDEKSGEIVKVVIVKK-DPALTAEDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRRELRDA 557 (560)
T ss_pred CCCCCCceEEEEEEcC-CCCCCHHHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHHHHh
Confidence 9887788777777654 445677899999999999999999999999999999999999999876
No 85
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-64 Score=552.10 Aligned_cols=507 Identities=18% Similarity=0.202 Sum_probs=403.7
Q ss_pred CCCcceeeccccccCCcceeeecCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHH
Q 039837 3 MPNSFSVPVPLAAAHDEEHIFRSRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRS 82 (544)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~ 82 (544)
+|+..+..+.+.++.+...+.++...+. ....|+.+.|.+.++++|+++|+++. ++.+||+||.++++++|+.|.+
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~sl~~ll~~~a~~~pd~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~ 491 (994)
T PRK07868 416 AANRSVRTLAVETARTLPRLARLGQIND--HTRISLGRIIAEQARDAPKGEFLLFD--GRVHTYEAVNRRINNVVRGLIA 491 (994)
T ss_pred HhhhhhHHHHHHHHHhhhhHHHhhhcCC--CCCccHHHHHHHHHHHCCCCeEEEeC--CceeeHHHHHHHHHHHHHHHHH
Confidence 4666777788888888888855554443 66779999999999999999999986 6899999999999999999999
Q ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEeccc
Q 039837 83 LGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEE 162 (544)
Q Consensus 83 ~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 162 (544)
.|+++||+|+++++|+++++++++||+++|++++|++|. +++.++++.++++++|++++..+.+.....++++++..
T Consensus 492 ~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~~~~iiv~~~~ 568 (994)
T PRK07868 492 VGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQLPGRVLVLGGG 568 (994)
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhcCceEEEecCC
Confidence 999999999999999999999999999999999999985 58899999999999999987776665444445544321
Q ss_pred ccc--------cccCHHHHHHhh---------hhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccC
Q 039837 163 RIE--------SAINWSELIEAA---------DKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIG 225 (544)
Q Consensus 163 ~~~--------~~~~~~~~~~~~---------~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~ 225 (544)
... ....+++..... ..........+.+| +|+|.||++.++|.++..........+ ++..
T Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~--~l~~ 645 (994)
T PRK07868 569 ESRDLDLPDDADVIDMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAA--ALDR 645 (994)
T ss_pred ccccccCCcchhhhhhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhc--CCCC
Confidence 100 001111110000 00001222345676 577778888888876654444433444 6788
Q ss_pred ccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccc
Q 039837 226 QVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLR 305 (544)
Q Consensus 226 ~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~ 305 (544)
++++++.+|++|.+++...++.++..|+++++.+.+++..+++.|+++++|+++++|+++..|++.......+++++|+
T Consensus 646 ~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~- 724 (994)
T PRK07868 646 RDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRL- 724 (994)
T ss_pred CCeEEEecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEE-
Confidence 9999999999999998766777888888888888889999999999999999999999999998865433445566665
Q ss_pred cEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCc-eEEEE--eC------
Q 039837 306 AVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNL-EVKFI--NP------ 376 (544)
Q Consensus 306 ~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~--d~------ 376 (544)
++ |+.++++++++|.+.|+++.+++.||+||++..... . .....+++|+|++++ +++|. |+
T Consensus 725 -~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~-~------~~~~~~svG~p~pg~~~v~i~~~d~~~g~li 794 (994)
T PRK07868 725 -FI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLAN-V------SGAKIGSKGRPLPGAGRVELAAYDPEHDLIL 794 (994)
T ss_pred -Ee--cCCCCHHHHHHHHHHhCchheeeeeecccccccccc-c------CCCCCcccCCccCCCCceeEEEecCcCCcee
Confidence 65 345999999999999977899999999998754321 1 223567899999998 66654 11
Q ss_pred --CCC--CcCCCCCCceEEEecccccccccCChhhh--hcccC-CCCeeecCceEEEcCCCcEEEEeecCCceeecceee
Q 039837 377 --ETG--KSLPSNTPGELCVRSQCVMQGYYNNEEET--ARTID-KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQV 449 (544)
Q Consensus 377 --~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~--~~~~~-~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v 449 (544)
++| +.++.|+.|||+++++.. + +|+.+ ...|. .+|||+|||+|++|+||+++++||.||+||++|.+|
T Consensus 795 ~d~~G~~~~~~~ge~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I 869 (994)
T PRK07868 795 EDDRGFVRRAEVNEVGVLLARARGP----I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPV 869 (994)
T ss_pred ecCCceEEEcCCCCceEEEEecCCC----C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceE
Confidence 345 567889999999998753 3 34332 22342 479999999999999999999999999999999999
Q ss_pred ChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCccc
Q 039837 450 APAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKI 529 (544)
Q Consensus 450 ~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi 529 (544)
+|.+||++|.+||+|.+++|++++++. ++.+++++++.++...+.++|++++++ ++.|++|..|+++++||+|++||+
T Consensus 870 ~p~EIE~~L~~hp~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~~~~~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi 947 (994)
T PRK07868 870 YTEPVTDALGRIGGVDLAVTYGVEVGG-RQLAVAAVTLRPGAAITAADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRP 947 (994)
T ss_pred cHHHHHHHHhcCCCeeEEEEEeecCCC-CceEEEEEEeCCCCcCCHHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccE
Confidence 999999999999999999999998765 578899999888777888999999986 999999999999999999999999
Q ss_pred chHHHHHH
Q 039837 530 MRRILKDK 537 (544)
Q Consensus 530 ~r~~l~~~ 537 (544)
+|++|++.
T Consensus 948 ~r~~L~~~ 955 (994)
T PRK07868 948 TVSALRAA 955 (994)
T ss_pred ehHHHHhc
Confidence 99999865
No 86
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=6.3e-64 Score=517.27 Aligned_cols=485 Identities=23% Similarity=0.314 Sum_probs=406.2
Q ss_pred CCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCee
Q 039837 36 VTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF 115 (544)
Q Consensus 36 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 115 (544)
+++.+.|.++|+.+|+++++.+. ++++||.||.++++++|.+|.+.|+++||+|+++++|+.+++++++||+++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~ 79 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYL--GEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAY 79 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 57889999999999999999876 6899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHH-h-----hhhcCCCCCCCCC
Q 039837 116 SGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIE-A-----ADKAGNNFSNDDD 189 (544)
Q Consensus 116 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~ 189 (544)
+|+++.++.+++.++++..+++++++..+... .......+..++ +..... . .............
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~ 149 (503)
T PRK04813 80 IPVDVSSPAERIEMIIEVAKPSLIIATEELPL--EILGIPVITLDE--------LKDIFATGNPYDFDHAVKGDDNYYII 149 (503)
T ss_pred ecCCCCChHHHHHHHHHhcCCCEEEecccccc--cccCCcEEehHH--------hhhhhhccccccccccCCCCCcEEEE
Confidence 99999999999999999999999999876521 111122221110 011000 0 0001112233467
Q ss_pred CCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc---cCHHHH
Q 039837 190 VKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR---FELRAF 266 (544)
Q Consensus 190 ~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~ 266 (544)
+||||||.||+|.+||+++.....+....+ .+...++++...|++|..++ ..++.++..|+++++.+. .++..+
T Consensus 150 ~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~v~~~~~~~~~~~~~ 226 (503)
T PRK04813 150 FTSGTTGKPKGVQISHDNLVSFTNWMLEDF--ALPEGPQFLNQAPYSFDLSV-MDLYPTLASGGTLVALPKDMTANFKQL 226 (503)
T ss_pred ECCCCCCCCcEEEeehHHHHHHHHHHHHHc--CCCcCceeeecCCcchhHhH-HHHHHHHhcCCEEEEcChhhhcCHHHH
Confidence 899999999999999999999888777666 67888999999999999887 567789999999998874 478899
Q ss_pred HHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccc
Q 039837 267 LDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLT 346 (544)
Q Consensus 267 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~ 346 (544)
++.+++++++++..+|+++..++.........+++++. ++++|+++++.+.+++.+.|+++.+++.||+||++..+..
T Consensus 227 ~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~--i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~ 304 (503)
T PRK04813 227 FETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTH--FLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTS 304 (503)
T ss_pred HHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceE--EEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEE
Confidence 99999999999999999998876654434455677777 9999999999999999999988999999999999865543
Q ss_pred cCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhccc---CCCCeeecCce
Q 039837 347 YGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTI---DKNGWLHTGDI 423 (544)
Q Consensus 347 ~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~---~~~~~~~TGD~ 423 (544)
..............++|++.++++++|+| +++.+++.|+.|||+++|+.++.||+++++.+...| ++.+||+|||+
T Consensus 305 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~ 383 (503)
T PRK04813 305 IEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDA 383 (503)
T ss_pred EEecccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCce
Confidence 32111111234556799999999999999 688999999999999999999999999999888766 33469999999
Q ss_pred EEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCC----CHHHHH
Q 039837 424 GYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKE----SEDDIM 499 (544)
Q Consensus 424 ~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~----~~~~l~ 499 (544)
|++ .+|++++.||.+|+++++|+++++.+||+.+.++|+|.+++|++.++...++.+++++++.++... -.+++.
T Consensus 384 ~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 462 (503)
T PRK04813 384 GYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFEREFELTKAIK 462 (503)
T ss_pred EEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEeccccccccchhHHHHH
Confidence 999 999999999999999999999999999999999999999999998777677888998887654211 114688
Q ss_pred HHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHH
Q 039837 500 DFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 500 ~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~ 539 (544)
++++++++.+++|..++++++||+|.+||++|++|++++.
T Consensus 463 ~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 463 KELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred HHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhc
Confidence 8999999999999999999999999999999999999875
No 87
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=2.1e-64 Score=533.68 Aligned_cols=499 Identities=22% Similarity=0.299 Sum_probs=384.1
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEc----------cCC-----------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEE
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEA----------VSG-----------KAYTYAQVARDTRGFAKALRSLGLRKGQVV 91 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~----------~~~-----------~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V 91 (544)
+...|+.++|.++|+.+||++|+... .++ +.+||+||.++++++|++|.+.|+++||+|
T Consensus 55 ~~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~V 134 (696)
T PLN02387 55 EGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERV 134 (696)
T ss_pred CCCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEE
Confidence 44569999999999999999999431 012 238999999999999999999999999999
Q ss_pred EEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----C-cEEEeccccc-
Q 039837 92 IVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----L-PIIVLGEERI- 164 (544)
Q Consensus 92 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~-~~~~~~~~~~- 164 (544)
+|+++|+++|+++++||+++|+++||+++.++.+++.+++++++++++|++.+....+.... + .++.+++...
T Consensus 135 ai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~ 214 (696)
T PLN02387 135 AIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVD 214 (696)
T ss_pred EEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCch
Confidence 99999999999999999999999999999999999999999999999999987666554321 2 2333332111
Q ss_pred ----------ccccCHHHHHHhhhh-------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCcc
Q 039837 165 ----------ESAINWSELIEAADK-------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQV 227 (544)
Q Consensus 165 ----------~~~~~~~~~~~~~~~-------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~ 227 (544)
.....+.++...... ........+.|||||||.||||++||+++.+.+......+ ..+..+|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~-~~~~~~d 293 (696)
T PLN02387 215 SDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVV-PKLGKND 293 (696)
T ss_pred hhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhc-CCCCCCC
Confidence 011234444432111 1122334568999999999999999999998887665432 1467889
Q ss_pred EEEEecchhHHHHHHHHHHhhHhccceEEEcCccC--------HHHHHHHHHHcCceeeecchHHHHHHhcCCCCC----
Q 039837 228 TTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFE--------LRAFLDALITHEVTFAPIVPPIILSLVKDPIVD---- 295 (544)
Q Consensus 228 ~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~---- 295 (544)
++++++|++|.+++.. .+..+..|+++....... +..+.+.++.+++|++.++|.++..+.+.....
T Consensus 294 ~~l~~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~ 372 (696)
T PLN02387 294 VYLAYLPLAHILELAA-ESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAK 372 (696)
T ss_pred EEEEECcHHHHHHHHH-HHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcc
Confidence 9999999999999854 344566777776644321 133566789999999999999999886421100
Q ss_pred ---------------------------cc-----C----------c-cccccccEEEecCCCCHhHHHHHHhhcCCCeEE
Q 039837 296 ---------------------------EF-----D----------L-SKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQ 332 (544)
Q Consensus 296 ---------------------------~~-----~----------~-~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~ 332 (544)
.. + + +++|. +++||+++++++.+.+...+ ++.++
T Consensus 373 ~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~--i~~GGapl~~~~~~~~~~~~-g~~v~ 449 (696)
T PLN02387 373 GGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRF--MLSGGAPLSGDTQRFINICL-GAPIG 449 (696)
T ss_pred cHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEE--EEEcCCCCCHHHHHHHHHHc-CCCee
Confidence 00 0 0 34445 99999999999988777777 89999
Q ss_pred ecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeC-CCCCcC--CCCCCceEEEecccccccccCChhhhh
Q 039837 333 EAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINP-ETGKSL--PSNTPGELCVRSQCVMQGYYNNEEETA 409 (544)
Q Consensus 333 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~~~~~~--~~g~~Gel~v~~~~~~~gy~~~~~~~~ 409 (544)
+.||+||++..++... . .....+++|.|+|+++++|+|. +.+... .++..|||+|+||+++.|||++|+.|.
T Consensus 450 ~~YG~TEt~~~~~~~~----~-~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~ 524 (696)
T PLN02387 450 QGYGLTETCAGATFSE----W-DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTD 524 (696)
T ss_pred EeechhhcccceeecC----c-ccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHh
Confidence 9999999986655432 1 2345678999999999999984 333332 234579999999999999999999999
Q ss_pred ccc--CCCC--eeecCceEEEcCCCcEEEEeecCCceee-cceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEE
Q 039837 410 RTI--DKNG--WLHTGDIGYIDDDGDIFIVDRIKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAAC 484 (544)
Q Consensus 410 ~~~--~~~~--~~~TGD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~ 484 (544)
+.| +.+| ||+|||+|++|+||++++.||.+|+||+ +|++|+|.+||++|.+||.|.+++|++.+.. ..++|+
T Consensus 525 ~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~ 601 (696)
T PLN02387 525 EVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH---SYCVAL 601 (696)
T ss_pred hhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc---ceEEEE
Confidence 887 3345 9999999999999999999999999998 6999999999999999999999999986533 467888
Q ss_pred EEeCCCC--------C---CC----------HHHHHHHH-----HhcccCCCceeEEEEeecC------CCCCCcccchH
Q 039837 485 VVMNPNA--------K---ES----------EDDIMDFV-----ASNVATYKKVRVLHFVDGI------PKSHSGKIMRR 532 (544)
Q Consensus 485 v~~~~~~--------~---~~----------~~~l~~~l-----~~~l~~~~~p~~~~~~~~~------P~t~~GKi~r~ 532 (544)
+++.+.. . .+ .+.+.+.+ +.+|+.+.+|+.|.++.+- -+|++.|++|+
T Consensus 602 vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t~K~~R~ 681 (696)
T PLN02387 602 VVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAALKLKRE 681 (696)
T ss_pred EEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChhhhhhhH
Confidence 8875421 0 01 01222222 3368999999999888542 36888899999
Q ss_pred HHHHHHHHhhhC
Q 039837 533 ILKDKMLEKMRK 544 (544)
Q Consensus 533 ~l~~~~~~~~~~ 544 (544)
.+++.|+++|++
T Consensus 682 ~i~~~y~~~i~~ 693 (696)
T PLN02387 682 QIRKKFKDDLKK 693 (696)
T ss_pred HHHHHHHHHHHH
Confidence 999999999863
No 88
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=3e-65 Score=624.85 Aligned_cols=519 Identities=18% Similarity=0.236 Sum_probs=434.3
Q ss_pred CCCCcceeeccccccCCcceeee-cCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHH
Q 039837 2 AMPNSFSVPVPLAAAHDEEHIFR-SRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKAL 80 (544)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L 80 (544)
++|+..+.++++..+++..++.. ++.+..+.+...++++.|.+.++++|+++|+++. +.++||+||.++++++|+.|
T Consensus 3685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~--~~~~tY~eL~~~~~~la~~L 3762 (4334)
T PRK05691 3685 QGFHGDLSELPLLGEQERDFLLDGCNRSERDYPLEQSYVRLFEAQVAAHPQRIAASCL--DQQWSYAELNRAANRLGHAL 3762 (4334)
T ss_pred hCcCCChhhcCCCCHHHHHHHHHhhCCccCCCccccCHHHHHHHHHHhCCCceEEEcC--CCcccHHHHHHHHHHHHHHH
Confidence 57888999999998888776643 4445555666779999999999999999999987 78899999999999999999
Q ss_pred HHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-------
Q 039837 81 RSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG------- 153 (544)
Q Consensus 81 ~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~------- 153 (544)
.+.|+++|++|+++++++.++++++|||+++|+++||++|.++.+++.++++++++++++++...........
T Consensus 3763 ~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 3842 (4334)
T PRK05691 3763 RAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCAN 3842 (4334)
T ss_pred HHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999876543322111
Q ss_pred CcEEEe-cccccccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEe
Q 039837 154 LPIIVL-GEERIESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGL 232 (544)
Q Consensus 154 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 232 (544)
.+.+.+ ++........ ........+...+++.|||||||.||||+++|+++.+.+.+....+ ++.+.++++..
T Consensus 3843 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~--~~~~~~~~~~~ 3916 (4334)
T PRK05691 3843 RPRLLVWEEVQAGEVAS----HNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL--ALSEADVIAQT 3916 (4334)
T ss_pred ccceeeecccccccccc----cCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhc--CCCccceEEEe
Confidence 111111 1110000000 0000111233445789999999999999999999999998888777 88999999999
Q ss_pred cchhHHHHHHHHHHhhHhccceEEEcCc---cCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEE
Q 039837 233 IPFFHIYGITGICCATLRNKGKVVMMNR---FELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMT 309 (544)
Q Consensus 233 ~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~ 309 (544)
.++.+..++ ..++.++..|+++++.+. .++..+.+.++++++|++.++|+++..++... ...++++|. +++
T Consensus 3917 ~s~~fd~s~-~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~--~~~ 3990 (4334)
T PRK05691 3917 ASQSFDISV-WQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRW--MLP 3990 (4334)
T ss_pred cCCchhHHH-HHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceE--EEe
Confidence 999999887 788999999999999764 47889999999999999999999999987642 223566666 999
Q ss_pred ecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCce
Q 039837 310 AAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGE 389 (544)
Q Consensus 310 ~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Ge 389 (544)
|||++++++.++|.+.+|+++++|.||+||++..++........ ......++|+|+++++++|+| +.++++|.|..||
T Consensus 3991 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GE 4068 (4334)
T PRK05691 3991 TGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLAS-TRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGE 4068 (4334)
T ss_pred cCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEccccc-ccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceE
Confidence 99999999999999998899999999999998766544322111 223446799999999999999 7899999999999
Q ss_pred EEEecccccccccCChhhhhcccC-------CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCC
Q 039837 390 LCVRSQCVMQGYYNNEEETARTID-------KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHP 462 (544)
Q Consensus 390 l~v~~~~~~~gy~~~~~~~~~~~~-------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 462 (544)
|+|+|+++++||+++|+.|.+.|. +.+||+|||+|++++||.++++||.|++||++|.+|.+.+||++|+++|
T Consensus 4069 L~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~ 4148 (4334)
T PRK05691 4069 LCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQA 4148 (4334)
T ss_pred EEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCC
Confidence 999999999999999999998883 3569999999999999999999999999999999999999999999999
Q ss_pred CccceEEEeecCCCCCceeEEEEEeCCCCCC---CHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHH
Q 039837 463 SVEDAAVVSLPDEEAGEIPAACVVMNPNAKE---SEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDK 537 (544)
Q Consensus 463 ~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~ 537 (544)
+|.+++|+... ...+..++++++....... ..++++++++++||.|++|..++++++||+|+||||||++|++.
T Consensus 4149 ~v~~a~v~~~~-~~~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4149 EVREAAVAVQE-GVNGKHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred CccEEEEEEec-CCCCcEEEEEEeCCcccccchHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 99998887654 3456788999886554322 23678899999999999999999999999999999999999764
No 89
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=5.1e-63 Score=513.61 Aligned_cols=491 Identities=27% Similarity=0.434 Sum_probs=405.1
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
..++.++|.++++.+|+++|+.+. ++.+||.||.++++++|.+|.+.|+++||+|+++++|+.+++++++||+++|++
T Consensus 20 ~~~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~ 97 (541)
T TIGR03205 20 RGTLPDLLSKAAADYGPRPALEFR--DRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGAR 97 (541)
T ss_pred CCCHHHHHHHHHHHcCCCceEEEC--CcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeE
Confidence 448999999999999999999885 689999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccch--HHHhhc----CCCc-EEEecccc-------------cccccCHHHHH
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPI--YEKVKG----LGLP-IIVLGEER-------------IESAINWSELI 174 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--~~~~~~----~~~~-~~~~~~~~-------------~~~~~~~~~~~ 174 (544)
++|+++..+.+++.++++.++++++++++.. .....+ .... ++..+... ......++...
T Consensus 98 ~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (541)
T TIGR03205 98 VVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFV 177 (541)
T ss_pred EEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHH
Confidence 9999999999999999999999999987531 111111 1111 22222110 01122344443
Q ss_pred Hhhhh------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccc---cCCcccCccEEEEecchhHHHHHHHHH
Q 039837 175 EAADK------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFS---VVPEMIGQVTTLGLIPFFHIYGITGIC 245 (544)
Q Consensus 175 ~~~~~------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~ 245 (544)
+.... ..........+||||||.||+|++||+++.......... ........+.++...|++|.+++...+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~ 257 (541)
T TIGR03205 178 KGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYALTVIL 257 (541)
T ss_pred hcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHHHHHH
Confidence 22100 111223346789999999999999999987654422110 001223457889999999999987778
Q ss_pred HhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhh
Q 039837 246 CATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKK 325 (544)
Q Consensus 246 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~ 325 (544)
+.++..|+++++....++..+++.++++++|++.++|+++..|++........+++++. ++.||+++++++.+++.+.
T Consensus 258 ~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~--i~~gg~~~~~~~~~~~~~~ 335 (541)
T TIGR03205 258 LRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLAT--IGSGGAPLPVEVANFFERK 335 (541)
T ss_pred HHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccce--EEEccccCCHHHHHHHHHH
Confidence 88999999999888889999999999999999999999999998765444445667777 9999999999999999887
Q ss_pred cCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEe-CCCCCcCCCCCCceEEEecccccccccCC
Q 039837 326 FPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFIN-PETGKSLPSNTPGELCVRSQCVMQGYYNN 404 (544)
Q Consensus 326 ~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~~g~~Gel~v~~~~~~~gy~~~ 404 (544)
+ +.++++.||+||++..++.... ......+++|.|++++.+++++ .+.+++++.|+.|||+++|++++.||+++
T Consensus 336 ~-~~~~~~~YG~TE~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~ 410 (541)
T TIGR03205 336 T-GLKLKSGWGMTETCSPGTGHPP----EGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYWNR 410 (541)
T ss_pred h-CCCeecccccccCCcccccCCC----CCCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCccccccCC
Confidence 7 7899999999999876654431 1223456899999999998864 26778899999999999999999999999
Q ss_pred hhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEE
Q 039837 405 EEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAAC 484 (544)
Q Consensus 405 ~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~ 484 (544)
++.+.+.| .++||+|||+++++++|++++.||.+|+||++|++++|.+||+.++++++|.+++|++++++..++.++++
T Consensus 411 ~~~~~~~~-~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~ 489 (541)
T TIGR03205 411 PEESAEAF-VGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAF 489 (541)
T ss_pred hhhhHhhh-ccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEE
Confidence 99998887 57899999999999999999999999999999999999999999999999999999999988778889999
Q ss_pred EEeCCCCC-CCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHH
Q 039837 485 VVMNPNAK-ESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILK 535 (544)
Q Consensus 485 v~~~~~~~-~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~ 535 (544)
+++.++.. .+.+++.++++++|+.+++|..++++++||+|.+||++|++|+
T Consensus 490 v~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 490 VKLRPGAKPFSLDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred EEECCCCCcCCHHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 98876543 5778999999999999999999999999999999999999874
No 90
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-64 Score=533.35 Aligned_cols=494 Identities=22% Similarity=0.283 Sum_probs=379.4
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEcc-------------------------CCceeeHHHHHHHHHHHHHHHHHcCCCCCC
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAV-------------------------SGKAYTYAQVARDTRGFAKALRSLGLRKGQ 89 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~-------------------------~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd 89 (544)
..|+.++|.++++++|+++|+.+.. +.+++||+||.++++++|.+|.+.|+++||
T Consensus 68 ~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd 147 (700)
T PTZ00216 68 GPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGS 147 (700)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 4589999999999999999998731 247899999999999999999999999999
Q ss_pred EEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC-------CCcEEEeccc
Q 039837 90 VVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL-------GLPIIVLGEE 162 (544)
Q Consensus 90 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------~~~~~~~~~~ 162 (544)
+|+|+++|+++|+++++||+++|++++|+++.++.+++.++++++++++++++......+... ...++.++..
T Consensus 148 ~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~~ 227 (700)
T PTZ00216 148 NVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDSL 227 (700)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECCC
Confidence 999999999999999999999999999999999999999999999999999987655443211 1233333321
Q ss_pred c------cccccCHHHHHHhhh----------hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCC---cc
Q 039837 163 R------IESAINWSELIEAAD----------KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVP---EM 223 (544)
Q Consensus 163 ~------~~~~~~~~~~~~~~~----------~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~---~~ 223 (544)
. ......++++..... .......+.+.+||||||.||||++||+++.+.+......+.. ..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~ 307 (700)
T PTZ00216 228 PASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPP 307 (700)
T ss_pred ccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCC
Confidence 1 011234555543320 0011223456789999999999999999999887766543311 23
Q ss_pred cCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHH-------HHHHcCceeeecchHHHHHHhcCCCC--
Q 039837 224 IGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLD-------ALITHEVTFAPIVPPIILSLVKDPIV-- 294 (544)
Q Consensus 224 ~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~-------~i~~~~~t~~~~~P~~~~~l~~~~~~-- 294 (544)
...+++++++|++|.+++.. ....+..|+++.+. ++..+.+ .++++++|++.++|.++..+.+....
T Consensus 308 ~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~ 383 (700)
T PTZ00216 308 EEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKL 383 (700)
T ss_pred CCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHH
Confidence 67889999999999998743 45567788877764 3444444 67889999999999999887542100
Q ss_pred -----------------------CccC---------------c-cccccccEEEecCCCCHhHHHHHHhhcCCCeEEecc
Q 039837 295 -----------------------DEFD---------------L-SKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAY 335 (544)
Q Consensus 295 -----------------------~~~~---------------~-~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 335 (544)
.... + ++++. +++||+++++++.+.+...+ + .+++.|
T Consensus 384 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~--i~~GGa~l~~~~~~~~~~~~-~-~l~~~Y 459 (700)
T PTZ00216 384 PPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRA--MLSGGGPLSAATQEFVNVVF-G-MVIQGW 459 (700)
T ss_pred hccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEE--EEECCCCCCHHHHHHHHHHh-h-hHhhcc
Confidence 0000 0 34445 99999999999998877766 6 899999
Q ss_pred cCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCC-CcCCCCCCceEEEecccccccccCChhhhhcccCC
Q 039837 336 GLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETG-KSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDK 414 (544)
Q Consensus 336 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 414 (544)
|+||++..++... ......+++|+|+++++++|+|.++. ...+++..|||+|+|++++.|||++|+.|.+.|+.
T Consensus 460 G~TEt~~~~~~~~-----~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~ 534 (700)
T PTZ00216 460 GLTETVCCGGIQR-----TGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDE 534 (700)
T ss_pred CcccccccccccC-----CCCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhccc
Confidence 9999986554332 13345689999999999999995331 23455678999999999999999999999999988
Q ss_pred CCeeecCceEEEcCCCcEEEEeecCCcee-ecceeeChHHHHHHHhcCCCccce--EEEeecCCCCCceeEEEEEeCCCC
Q 039837 415 NGWLHTGDIGYIDDDGDIFIVDRIKELIK-YKGFQVAPAELEAILLTHPSVEDA--AVVSLPDEEAGEIPAACVVMNPNA 491 (544)
Q Consensus 415 ~~~~~TGD~~~~~~~g~~~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~v~~~--~v~~~~~~~~~~~~~~~v~~~~~~ 491 (544)
+|||+|||+|++++||++++.||.||+|| .+|++|+|.+||+++.++|.|.++ +|+..++. ..+++++++....
T Consensus 535 dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~~---~~l~a~vv~~~~~ 611 (700)
T PTZ00216 535 DGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPAR---SYICALVLTDEAK 611 (700)
T ss_pred cCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecCC---ceEEEEEecCHHH
Confidence 99999999999999999999999999999 699999999999999999999973 44443322 5678888764310
Q ss_pred --------C--CC------HH----HHHHHH-----HhcccCCCceeEEEEee------cCCCCCCcccchHHHHHHHHH
Q 039837 492 --------K--ES------ED----DIMDFV-----ASNVATYKKVRVLHFVD------GIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 492 --------~--~~------~~----~l~~~l-----~~~l~~~~~p~~~~~~~------~~P~t~~GKi~r~~l~~~~~~ 540 (544)
. .+ .. .+.+.+ ++.+..+..++.|+++. +-.+|+++|++|+++++.|++
T Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t~K~~R~~i~~~y~~ 691 (700)
T PTZ00216 612 AMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAAMKLKRRVIDERYAD 691 (700)
T ss_pred HHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChhhccchHHHHHHHHH
Confidence 0 01 11 122222 23577888999888873 345699999999999999999
Q ss_pred hhhC
Q 039837 541 KMRK 544 (544)
Q Consensus 541 ~~~~ 544 (544)
+|++
T Consensus 692 ~i~~ 695 (700)
T PTZ00216 692 LIKE 695 (700)
T ss_pred HHHH
Confidence 9863
No 91
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.4e-64 Score=616.92 Aligned_cols=517 Identities=20% Similarity=0.291 Sum_probs=437.8
Q ss_pred CCCCcceeeccccccCCcceeeecCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHH
Q 039837 2 AMPNSFSVPVPLAAAHDEEHIFRSRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALR 81 (544)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~ 81 (544)
++|+..+.++++.++++..++..++.... .+...++.++|.++|+++|+++|+++. ++++||+||.++++++|++|+
T Consensus 1098 ~~p~~~~~~l~l~~~~~~~~l~~~~~~~~-~~~~~~l~~~~~~~a~~~p~~~Al~~~--~~~lTY~eL~~~~~~lA~~L~ 1174 (4334)
T PRK05691 1098 EDPQRALGDVQLLDAAERAQLAQWGQAPC-APAQAWLPELLNEQARQTPERIALVWD--GGSLDYAELHAQANRLAHYLR 1174 (4334)
T ss_pred hCcccchhhhcCCCHHHHHHHHhccCCCC-CCccCCHHHHHHHHHHhCCCCeEEEEC--CceEeHHHHHHHHHHHHHHHH
Confidence 57888999999999888887766654332 234568999999999999999999986 679999999999999999999
Q ss_pred HcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-CcEEEec
Q 039837 82 SLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-LPIIVLG 160 (544)
Q Consensus 82 ~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~ 160 (544)
+.|+++|++|++++++++++++++|||+++|++++|+++.++.+++.+++++++++++|++......+.... ...+.++
T Consensus 1175 ~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 1254 (4334)
T PRK05691 1175 DKGVGPDVCVAIAAERSPQLLVGLLAILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAEGVSAIALD 1254 (4334)
T ss_pred HcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccccCceEEeec
Confidence 999999999999999999999999999999999999999999999999999999999999987665544321 1222222
Q ss_pred ccccccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHH
Q 039837 161 EERIESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYG 240 (544)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 240 (544)
.......... ...........++..+||||||.||||+++|+++.+.+.+....+ ++.++++++...|++|..+
T Consensus 1255 ~~~~~~~~~~----~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~fd~s 1328 (4334)
T PRK05691 1255 SLHLDSWPSQ----APGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATY--ALDDSDVLMQKAPISFDVS 1328 (4334)
T ss_pred cccccccCCC----CCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhc--CCCCCCEEEEeCCccHHHH
Confidence 1111000000 000011123344778999999999999999999999998887777 7889999999999999888
Q ss_pred HHHHHHhhHhccceEEEcC---ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHh
Q 039837 241 ITGICCATLRNKGKVVMMN---RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPD 317 (544)
Q Consensus 241 ~~~~~~~~l~~G~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~ 317 (544)
+ ..++.++..|+++++.+ ..++..+.+.++++++|++.++|+++..|.+... ...+++++. +++|||+++++
T Consensus 1329 ~-~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~--~~~gGe~l~~~ 1403 (4334)
T PRK05691 1329 V-WECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRR--LFSGGEALPAE 1403 (4334)
T ss_pred H-HHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccE--EEEeecCCCHH
Confidence 7 67889999999999975 3578999999999999999999999999986542 234667677 99999999999
Q ss_pred HHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccc
Q 039837 318 LLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCV 397 (544)
Q Consensus 318 ~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~ 397 (544)
+.++|.+.+|+++++|.||+||++..++...... ......++|+|++++.++|+| +.+++++.|+.|||+|+|+++
T Consensus 1404 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~---~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v 1479 (4334)
T PRK05691 1404 LRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQA---EDGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGL 1479 (4334)
T ss_pred HHHHHHHhCCCcEEEeCCCcChheeeeeeeeccc---ccCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCccc
Confidence 9999999998999999999999987665432111 223456899999999999999 678999999999999999999
Q ss_pred cccccCChhhhhcccCC-------CCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEE
Q 039837 398 MQGYYNNEEETARTIDK-------NGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVV 470 (544)
Q Consensus 398 ~~gy~~~~~~~~~~~~~-------~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 470 (544)
++||+++|+.|.+.|.. .+||+|||+|++++||.++++||.||+||++|++|+|.+||++|.++|+|.+++|+
T Consensus 1480 ~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~ 1559 (4334)
T PRK05691 1480 ARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVL 1559 (4334)
T ss_pred chhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEE
Confidence 99999999999988732 35999999999999999999999999999999999999999999999999999998
Q ss_pred eecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHH
Q 039837 471 SLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDK 537 (544)
Q Consensus 471 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~ 537 (544)
...+. .+..++++++...+.....++++++++++||.|++|..++++++||+|++||++|++|++.
T Consensus 1560 ~~~~~-~~~~lva~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1560 VREGA-AGAQLVGYYTGEAGQEAEAERLKAALAAELPEYMVPAQLIRLDQMPLGPSGKLDRRALPEP 1625 (4334)
T ss_pred EeeCC-CCCEEEEEEEeCCCCCCCHHHHHHHHHHhCccccCCcEEEEccccCCCCCCCcChhhcCcc
Confidence 66543 4578899988777666777899999999999999999999999999999999999999754
No 92
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-63 Score=507.39 Aligned_cols=458 Identities=25% Similarity=0.373 Sum_probs=388.4
Q ss_pred hhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCH
Q 039837 45 DAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHA 124 (544)
Q Consensus 45 ~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~ 124 (544)
.++..++++|+++. ++++||+||.++++++|..|+ ++|+|+++++|+++++++++||+++|++++|+++..+.
T Consensus 9 ~~~~~~~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~ 81 (471)
T PRK07787 9 VAAAADIADAVRIG--GRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGV 81 (471)
T ss_pred hhcccCCceEEEeC--CcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCCh
Confidence 34456789999886 789999999999999999996 46999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceeecc
Q 039837 125 SELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVMLT 204 (544)
Q Consensus 125 ~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t 204 (544)
+++..+++.+++++++++.+... ..++........ ..+... ..........+.+||||||.||||.+|
T Consensus 82 ~~l~~~l~~~~~~~il~~~~~~~----~~~~~~~~~~~~----~~~~~~----~~~~~~~~a~i~~TSGTTG~PK~v~~t 149 (471)
T PRK07787 82 AERRHILADSGAQAWLGPAPDDP----AGLPHVPVRLHA----RSWHRY----PEPDPDAPALIVYTSGTTGPPKGVVLS 149 (471)
T ss_pred HHHHHHHHhcCCCEEEecCCccc----ccccceeeeccc----cccccC----CCCCCCceEEEEECCCCCCCCCEEEEe
Confidence 99999999999999999764210 011111111000 000000 011223344678999999999999999
Q ss_pred HHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHH
Q 039837 205 HRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPI 284 (544)
Q Consensus 205 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~ 284 (544)
|+++...+......+ +...+++++..+|++|.+|+...++.++..|+++++.+..++..+++.++ +++|++.++|++
T Consensus 150 ~~~l~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~ 226 (471)
T PRK07787 150 RRAIAADLDALAEAW--QWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTV 226 (471)
T ss_pred HHHHHHHHHHHHHhc--CCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEEcchHH
Confidence 999999887777666 67788999999999999999888999999999999998889999999999 999999999999
Q ss_pred HHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccc
Q 039837 285 ILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGF 364 (544)
Q Consensus 285 ~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~ 364 (544)
+..|++.... ...+++++. ++.||++++++++++|.+.+ +..+++.||+||++....... ......+++|+
T Consensus 227 ~~~l~~~~~~-~~~l~~l~~--~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~-----~~~~~~~~vG~ 297 (471)
T PRK07787 227 WSRIAADPEA-ARALRGARL--LVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTRA-----DGERRPGWVGL 297 (471)
T ss_pred HHHHHhCccc-cccccceeE--EEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecCC-----CCcccCCcccc
Confidence 9999875432 234566666 99999999999999999988 789999999999986543321 12334568999
Q ss_pred cCCCceEEEEeCCCCCcCC-CCC-CceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeec-CCc
Q 039837 365 ILPNLEVKFINPETGKSLP-SNT-PGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRI-KEL 441 (544)
Q Consensus 365 ~~~~~~~~i~d~~~~~~~~-~g~-~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~-~d~ 441 (544)
|++++.++|+| +++.+++ .|+ .|||+++|+.++.||+++++.+...|..++||+|||+|++++||.+++.||. +|+
T Consensus 298 ~~~g~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~ 376 (471)
T PRK07787 298 PLAGVETRLVD-EDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDL 376 (471)
T ss_pred cCCCcEEEEEC-CCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCcee
Confidence 99999999999 4577776 344 7999999999999999999999998877899999999999999999999996 889
Q ss_pred eeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecC
Q 039837 442 IKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGI 521 (544)
Q Consensus 442 i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~ 521 (544)
++.+|.+++|.+||++|.+++.|.+++|++.++...++.++++++.. ...+.+++.++++++|+++++|..++++++|
T Consensus 377 i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~--~~~~~~~l~~~l~~~l~~~~~P~~i~~~~~i 454 (471)
T PRK07787 377 IKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGA--DDVAADELIDFVAQQLSVHKRPREVRFVDAL 454 (471)
T ss_pred EeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeC--CCCCHHHHHHHHHhhcccccCCcEEEEeccC
Confidence 99999999999999999999999999999998888888999998873 3467889999999999999999999999999
Q ss_pred CCCCCcccchHHHHH
Q 039837 522 PKSHSGKIMRRILKD 536 (544)
Q Consensus 522 P~t~~GKi~r~~l~~ 536 (544)
|+|.+||++|++|++
T Consensus 455 P~~~~GKi~r~~L~~ 469 (471)
T PRK07787 455 PRNAMGKVLKKQLLS 469 (471)
T ss_pred CCCCCccccHHHhcc
Confidence 999999999999976
No 93
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.1e-62 Score=507.68 Aligned_cols=484 Identities=24% Similarity=0.382 Sum_probs=403.9
Q ss_pred HHHHHhh-hhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeec
Q 039837 39 PDFVLQD-AELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSG 117 (544)
Q Consensus 39 ~~~l~~~-a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 117 (544)
.+++.++ ++.+|+++|+++. ++.+||.||.++++++|++|.+.|+++|++|+++++|+.+++++++||+++|++++|
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~ 84 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDD--ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVA 84 (508)
T ss_pred HHHHHHHHhcccCCceEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEee
Confidence 4455555 6779999999886 689999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----Cc-EEEecccccccccCHHHHHHhhh------hcCCCCC
Q 039837 118 ANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----LP-IIVLGEERIESAINWSELIEAAD------KAGNNFS 185 (544)
Q Consensus 118 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 185 (544)
+++.++.+++.++++.+++++++++.+....+.+.. .. .+..+. .......+.+...... .......
T Consensus 85 l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (508)
T TIGR02262 85 LNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGR-PEAGEVQLAELLATESEQFKPAATQADDP 163 (508)
T ss_pred ccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCC-CCcccccHHHHhhcCCCccCCCCCCCCCc
Confidence 999999999999999999999999987665543321 11 222221 1111122332222111 0112233
Q ss_pred CCCCCCCCCCcCcceeeccHHHHHHHHHh-hccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCH
Q 039837 186 NDDDVKQTDLWISKGVMLTHRNLVANLCS-TLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFEL 263 (544)
Q Consensus 186 ~~~~~tsgttG~PKgV~~t~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~ 263 (544)
....+||||||.||||.+||+++...+.. ....+ ++..++.++..+|++|.+++...++.++..|+++++.+ ..++
T Consensus 164 a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~--~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~ 241 (508)
T TIGR02262 164 AFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTL--GIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTP 241 (508)
T ss_pred EEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhc--CCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCH
Confidence 45678999999999999999999887765 33334 67888999999999999998777788899999998876 4589
Q ss_pred HHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCcccccc
Q 039837 264 RAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCI 343 (544)
Q Consensus 264 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~ 343 (544)
..+++.++++++|++.++|+++..+++..........+++. ++++|+++++++.+.|.+.| ++++++.||+||++.+
T Consensus 242 ~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~--~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~ 318 (508)
T TIGR02262 242 DAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRL--CTSAGEALPAEVGQRWQARF-GVDIVDGIGSTEMLHI 318 (508)
T ss_pred HHHHHHHHHHCCcEEecchHHHHHHhcCcccccccccccee--EEEcCCCCCHHHHHHHHHHh-CCchhhCccccccCce
Confidence 99999999999999999999999887765433334456666 99999999999999999998 8899999999999876
Q ss_pred ccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCce
Q 039837 344 TLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDI 423 (544)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~ 423 (544)
..... ......+++|.|++++.++++| +++.+++.|+.|||+++|+.++.||+++++.+...| .++||+|||+
T Consensus 319 ~~~~~-----~~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~-~~~~~~TGD~ 391 (508)
T TIGR02262 319 FLSNL-----PGDVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTF-QGEWTRSGDK 391 (508)
T ss_pred eecCC-----ccCCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhh-hcCceeccce
Confidence 55332 1223456899999999999999 789999999999999999999999999999998877 6799999999
Q ss_pred EEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCC---CCHHHHHH
Q 039837 424 GYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAK---ESEDDIMD 500 (544)
Q Consensus 424 ~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~ 500 (544)
++++++|.+++.||.+|+++++|.++++.+||+.|.++++|.++++++.++...++.+.+++++.++.. ...+++.+
T Consensus 392 ~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~ 471 (508)
T TIGR02262 392 YVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKE 471 (508)
T ss_pred EEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCccccccHHHHHH
Confidence 999999999999999999999999999999999999999999999999887777778888888766542 34678999
Q ss_pred HHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHH
Q 039837 501 FVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDK 537 (544)
Q Consensus 501 ~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~ 537 (544)
.++++|+++++|..+++++++|+|++||++|++|+++
T Consensus 472 ~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 472 HVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred HHHHhcccCCCCceEEEecCCCCCCCCcEehhhccCC
Confidence 9999999999999999999999999999999998753
No 94
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.1e-62 Score=509.95 Aligned_cols=496 Identities=29% Similarity=0.495 Sum_probs=408.7
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRS-LGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
..++.++|..+|+++|+++|+.+. ++.+||+||.++++++|.+|++ .|+++||+|+++++|++++++++|||+++|+
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 99 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGM 99 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCc
Confidence 457999999999999999999986 7899999999999999999984 8999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC----CCcEEEecc--cc------------------------
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL----GLPIIVLGE--ER------------------------ 163 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~--~~------------------------ 163 (544)
+++|+++.++.+++.++++.+++++++++.+..+.+.+. ....+.... ..
T Consensus 100 ~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (560)
T PRK08974 100 IVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYH 179 (560)
T ss_pred EEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhccccccccc
Confidence 999999999999999999999999999987654433221 111111100 00
Q ss_pred cccccCHHHHHHhhhh-------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCC-cccCccEEEEecch
Q 039837 164 IESAINWSELIEAADK-------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPF 235 (544)
Q Consensus 164 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~ 235 (544)
......+.+....... ........+.+||||||.||+|.++|+++..++......+.. .....+.++..+|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 259 (560)
T PRK08974 180 LPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALPL 259 (560)
T ss_pred CCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCcH
Confidence 0001111111111000 112223456789999999999999999998876544332211 23445678889999
Q ss_pred hHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCC
Q 039837 236 FHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPL 314 (544)
Q Consensus 236 ~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~ 314 (544)
+|.+++....+.++..|+++++.. ..++..+++.++++++|.+.++|+++..|++........++++++ +++||+++
T Consensus 260 ~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~--~~~gg~~~ 337 (560)
T PRK08974 260 YHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKL--SVGGGMAV 337 (560)
T ss_pred HHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeE--EEecCccC
Confidence 999998776777888888877654 567888999999999999999999999998876544555667776 99999999
Q ss_pred CHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEec
Q 039837 315 APDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRS 394 (544)
Q Consensus 315 ~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~ 394 (544)
++.+.++|.+.+ ++.+++.||+||++..+..... ......+++|.|++++.++++| +++..++.|+.|||+++|
T Consensus 338 ~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g 411 (560)
T PRK08974 338 QQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPY----DLDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGEPGELWVKG 411 (560)
T ss_pred CHHHHHHHHHHh-CCcEEeeecccccCceeeccCC----CCcccCCccccCcCCCEEEEEC-CCCCCCCCCCceEEEEec
Confidence 999999999987 8999999999999876655431 1223356899999999999999 578999999999999999
Q ss_pred ccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecC
Q 039837 395 QCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPD 474 (544)
Q Consensus 395 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 474 (544)
+.++.||+++++.+...+ .+|||+|||+++++++|.+++.||.+|+++++|.++++.+||++|.++|+|.+++|++.++
T Consensus 412 ~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~ 490 (560)
T PRK08974 412 PQVMLGYWQRPEATDEVI-KDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLEVAAVGVPS 490 (560)
T ss_pred CCcchhhcCChhhhhhhh-hcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCeeEEEEEeeec
Confidence 999999999999988888 7899999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhh
Q 039837 475 EEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 542 (544)
Q Consensus 475 ~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~ 542 (544)
...++.++++++..+ ...+.+++.++++++++.+++|..++++++||+|.+||++|+.|+++..++.
T Consensus 491 ~~~g~~~~~~v~~~~-~~~~~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~~~~ 557 (560)
T PRK08974 491 EVSGEAVKIFVVKKD-PSLTEEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARAKV 557 (560)
T ss_pred CCcceEEEEEEECCC-CCCCHHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHHHHhhh
Confidence 888887777776543 4456788999999999999999999999999999999999999999987764
No 95
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.4e-62 Score=512.28 Aligned_cols=495 Identities=26% Similarity=0.394 Sum_probs=398.0
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
.+|....+.+.++.+|+++|+.+. +.++||+||.++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 19 ~~~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v 96 (567)
T PLN02479 19 ALTPLWFLERAAVVHPTRKSVVHG--SVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAV 96 (567)
T ss_pred ccCHHHHHHHHHhhCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcE
Confidence 357889999999999999999986 678999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC------------CCc-EEEecccc----------cccccCHH
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL------------GLP-IIVLGEER----------IESAINWS 171 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------------~~~-~~~~~~~~----------~~~~~~~~ 171 (544)
++|+++.++.+++.++++.++++++++++...+...+. ..+ ++.+.... ......+.
T Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (567)
T PLN02479 97 VNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYE 176 (567)
T ss_pred EEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccHH
Confidence 99999999999999999999999999988765433211 111 22222110 01222344
Q ss_pred HHHHhhhhcC-------CCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHH
Q 039837 172 ELIEAADKAG-------NNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGI 244 (544)
Q Consensus 172 ~~~~~~~~~~-------~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 244 (544)
++........ ........+||||||.||||++||+++..........+ ++..+++++..+|++|.+++...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~h~~~~~~~ 254 (567)
T PLN02479 177 KFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIW--GMNEGAVYLWTLPMFHCNGWCFT 254 (567)
T ss_pred HHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhc--CCCCCCEEEEecchhhhhhHHHH
Confidence 4433211110 01123467999999999999999999876665554444 66788999999999999997655
Q ss_pred HHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCc-cCccccccccEEEecCCCCHhHHHHHH
Q 039837 245 CCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDE-FDLSKLQLRAVMTAAAPLAPDLLSSFE 323 (544)
Q Consensus 245 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-~~~~~l~~~~v~~~G~~~~~~~~~~~~ 323 (544)
+...+..|.++++ ..+++..+++.++++++|++.++|+++..|++...... ..+++++. ++++|+++++.+.++|.
T Consensus 255 ~~~~~~~g~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~--~~~~G~~~~~~~~~~~~ 331 (567)
T PLN02479 255 WTLAALCGTNICL-RQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVH--VMTAGAAPPPSVLFAMS 331 (567)
T ss_pred HHHHhhcCceEec-cCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeE--EEEcCCCCCHHHHHHHH
Confidence 5556666666554 56889999999999999999999999999987644322 24566666 99999999999999998
Q ss_pred hhcCCCeEEecccCccccccccccCCCCC------CCCCCCCCcccccCCCce-EEEEeCCCCCcCCCC--CCceEEEec
Q 039837 324 KKFPGVQVQEAYGLTEHSCITLTYGDPAN------PSAGSKKNSVGFILPNLE-VKFINPETGKSLPSN--TPGELCVRS 394 (544)
Q Consensus 324 ~~~~~~~i~~~yG~tE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~~~~-~~i~d~~~~~~~~~g--~~Gel~v~~ 394 (544)
+. +.++++.||+||+++.+........ ........+.|.+.+++. ++++|++++.+++.+ +.|||+++|
T Consensus 332 ~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g 409 (567)
T PLN02479 332 EK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRG 409 (567)
T ss_pred hc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEec
Confidence 75 7899999999998654332210000 000111235677888875 788886677888754 679999999
Q ss_pred ccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecC
Q 039837 395 QCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPD 474 (544)
Q Consensus 395 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~ 474 (544)
+.++.|||++++.+...| .++||+|||+++++++|++++.||.+|+|+++|.+|++.+||++|.++|.|.+++|++.++
T Consensus 410 ~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~ 488 (567)
T PLN02479 410 NMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVARPD 488 (567)
T ss_pred cchhhhhhcCcccccchh-cCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEeccc
Confidence 999999999999999888 6899999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCceeEEEEEeCCCCC-----CCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 475 EEAGEIPAACVVMNPNAK-----ESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 475 ~~~~~~~~~~v~~~~~~~-----~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
...++.+++++++.++.. ...+++.++++++|+.++.|..+++ .+||+|.+||++|+.|++.+.+
T Consensus 489 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~~ 558 (567)
T PLN02479 489 ERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAKE 558 (567)
T ss_pred hhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCeeHHHHHHHHHh
Confidence 777888999998776532 3347899999999999999998776 7899999999999999998765
No 96
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.2e-62 Score=508.46 Aligned_cols=492 Identities=24% Similarity=0.288 Sum_probs=403.0
Q ss_pred CCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCee
Q 039837 36 VTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF 115 (544)
Q Consensus 36 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 115 (544)
.|+.++|.++|+++|+++|+.+. ++.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~--~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~ 80 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCG--DRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVP 80 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEE
Confidence 58999999999999999999986 7899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----Cc-EEEecccccc----cccCHHHHHHhhhhc-----
Q 039837 116 SGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----LP-IIVLGEERIE----SAINWSELIEAADKA----- 180 (544)
Q Consensus 116 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~-~~~~~~~~~~----~~~~~~~~~~~~~~~----- 180 (544)
+++++.++.+++.++++++++++++++......+.+.. .. ++.++..... ....+++........
T Consensus 81 v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (533)
T PRK07798 81 VNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGSPERDFGE 160 (533)
T ss_pred EecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccCCcCCCCC
Confidence 99999999999999999999999999887665554321 11 2233322111 122455544331111
Q ss_pred CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccC-------Ccc------cCccEEEEecchhHHHHHHHHHHh
Q 039837 181 GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVV-------PEM------IGQVTTLGLIPFFHIYGITGICCA 247 (544)
Q Consensus 181 ~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~-------~~~------~~~~~~~~~~p~~~~~g~~~~~~~ 247 (544)
.......+.+||||||.||+|++||+++..........+. ... ..+++++..+|++|..++ ..++.
T Consensus 161 ~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~-~~~~~ 239 (533)
T PRK07798 161 RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAGQ-WAAFA 239 (533)
T ss_pred CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhhH-HHHHH
Confidence 0111235788999999999999999998765543221110 011 466889999999999998 47889
Q ss_pred hHhccceEEEcC--ccCHHHHHHHHHHcCceeeecchHHHHH-HhcCCC-CCccCccccccccEEEecCCCCHhHHHHHH
Q 039837 248 TLRNKGKVVMMN--RFELRAFLDALITHEVTFAPIVPPIILS-LVKDPI-VDEFDLSKLQLRAVMTAAAPLAPDLLSSFE 323 (544)
Q Consensus 248 ~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~-l~~~~~-~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~ 323 (544)
++..|+++++.+ .+++..+++.++++++|.+.++|..+.. +.+... .....+++++. +++||+++++++.++|.
T Consensus 240 ~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~--i~~gG~~~~~~~~~~~~ 317 (533)
T PRK07798 240 ALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFA--IASGGALFSPSVKEALL 317 (533)
T ss_pred HHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEE--EEECCCCCCHHHHHHHH
Confidence 999999999998 7889999999999999999999865533 333222 22344566666 99999999999999999
Q ss_pred hhcCCCeEEecccCccccccccccCCCCCCCCCCCCCccc--ccCCCceEEEEeCCCCCcCCCCCC--ceEEEecccccc
Q 039837 324 KKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVG--FILPNLEVKFINPETGKSLPSNTP--GELCVRSQCVMQ 399 (544)
Q Consensus 324 ~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~i~d~~~~~~~~~g~~--Gel~v~~~~~~~ 399 (544)
+.++++.+++.||+||++.+...... ......| .+.++..++++| +++.+++.|+. |+++ .++.++.
T Consensus 318 ~~~~~~~~~~~YG~tE~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~-~~~~~~~ 388 (533)
T PRK07798 318 ELLPNVVLTDSIGSSETGFGGSGTVA-------KGAVHTGGPRFTIGPRTVVLD-EDGNPVEPGSGEIGWIA-RRGHIPL 388 (533)
T ss_pred HHcCCCeEEeeecccccccccccCCC-------CCCccCCCCccCCCceEEEEC-CCCCCCCCCCCCeeEEE-eecCccc
Confidence 99988999999999999765543321 1111233 788999999999 57778999887 6665 4567999
Q ss_pred cccCChhhhhcccC---CCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCC
Q 039837 400 GYYNNEEETARTID---KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEE 476 (544)
Q Consensus 400 gy~~~~~~~~~~~~---~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 476 (544)
||+++++.+...|. +.+||+|||+++++++|++++.||.+|+++.+|.+|++.+||++|.++|+|.+++|++.++..
T Consensus 389 gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~ 468 (533)
T PRK07798 389 GYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKAHPDVADALVVGVPDER 468 (533)
T ss_pred cccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHhCccceeEEEEeccCcc
Confidence 99999999887763 346999999999999999999999999999999999999999999999999999999998887
Q ss_pred CCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 477 AGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 477 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
.++.+.+++++.++...+.+++.++++++|+.+++|..+++++++|+|.+||++|+.|+++..++
T Consensus 469 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~~~~~~~~~ 533 (533)
T PRK07798 469 WGQEVVAVVQLREGARPDLAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRWAKEQAAER 533 (533)
T ss_pred cCceEEEEEEECCCCCCCHHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHHHHhhhhccC
Confidence 78889999988877667889999999999999999999999999999999999999999988653
No 97
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=6.4e-63 Score=519.32 Aligned_cols=499 Identities=23% Similarity=0.252 Sum_probs=385.7
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEcc--CC-----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHH
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEAV--SG-----KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVA 105 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~~--~~-----~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~ 105 (544)
+...|+.++|.+.++++|+++|+.... .+ ..+||+|+.++++++|.+|.+.|+++||+|+|+++|+++|++++
T Consensus 39 ~~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~ 118 (660)
T PLN02430 39 SDITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAM 118 (660)
T ss_pred CCCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 456699999999999999999986431 11 34799999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHH-HhhcC-----CCc-EEEeccccc----------cccc
Q 039837 106 LGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYE-KVKGL-----GLP-IIVLGEERI----------ESAI 168 (544)
Q Consensus 106 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~~-----~~~-~~~~~~~~~----------~~~~ 168 (544)
+||+++|+++||+++.++.+++.++++.++++++|++..... .+... .++ ++.++.... ....
T Consensus 119 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 198 (660)
T PLN02430 119 EACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTY 198 (660)
T ss_pred HHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEE
Confidence 999999999999999999999999999999999999875432 22111 122 223322110 0123
Q ss_pred CHHHHHHhhhh-------cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccc---cCCcccCccEEEEecchhHH
Q 039837 169 NWSELIEAADK-------AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFS---VVPEMIGQVTTLGLIPFFHI 238 (544)
Q Consensus 169 ~~~~~~~~~~~-------~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~ 238 (544)
.++++...... ..+.....+.+||||||.||||++||+++...+...... +...+...+++++++|++|.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~ 278 (660)
T PLN02430 199 SWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHI 278 (660)
T ss_pred EHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHH
Confidence 45555433211 112233456889999999999999999998877654321 11245788999999999999
Q ss_pred HHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCC------------------------
Q 039837 239 YGITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIV------------------------ 294 (544)
Q Consensus 239 ~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------------------------ 294 (544)
++... .+.++..|+++++... ++..+.+.+++.++|++.++|.++..+.+....
T Consensus 279 ~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (660)
T PLN02430 279 LDRMI-EEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWM 356 (660)
T ss_pred HHHHH-HHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99855 4557889999887643 678899999999999999999999877642100
Q ss_pred -------Ccc---C----------c-cccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCC
Q 039837 295 -------DEF---D----------L-SKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANP 353 (544)
Q Consensus 295 -------~~~---~----------~-~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~ 353 (544)
... + + ++++. +++||+++++++.+.++ .+.++.+++.||+||+++.++... .
T Consensus 357 ~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~--~~~gga~l~~~~~~~~~-~~~~~~i~~~YG~TE~~~~~~~~~----~ 429 (660)
T PLN02430 357 NRGYSHKKASPMADFLAFRKVKAKLGGRLRL--LISGGAPLSTEIEEFLR-VTSCAFVVQGYGLTETLGPTTLGF----P 429 (660)
T ss_pred hcCCCCCCcchhHHHHHHHHHHHHhCCeEEE--EEECCCCCCHHHHHHHH-HhcCCCeeeecchhhhhhceEeec----c
Confidence 000 0 0 34455 99999999999865554 453578999999999987655432 1
Q ss_pred CCCCCCCcccccCCCceEEEEe-CCCC-CcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCc
Q 039837 354 SAGSKKNSVGFILPNLEVKFIN-PETG-KSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGD 431 (544)
Q Consensus 354 ~~~~~~~~~G~~~~~~~~~i~d-~~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 431 (544)
......+++|.|.++++++++| ++.+ .+++.+..|||+|+|++++.|||++|+.|...| .+|||+|||+|++++||+
T Consensus 430 ~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~-~dGw~~TGDig~~d~dG~ 508 (660)
T PLN02430 430 DEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVM-KDGWFHTGDIGEILPNGV 508 (660)
T ss_pred ccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhh-hccceeccceEEECCCCc
Confidence 1233468999999999999987 3333 455666789999999999999999999999888 689999999999999999
Q ss_pred EEEEeecCCceee-cceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCC----------CCC------
Q 039837 432 IFIVDRIKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNA----------KES------ 494 (544)
Q Consensus 432 ~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~----------~~~------ 494 (544)
+++.||.+|+||+ +|++|+|.+||++|.++|.|.+++|++.. .+..++|++++.+.. ..+
T Consensus 509 l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~ 585 (660)
T PLN02430 509 LKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS---FKSMLVAVVVPNEENTNKWAKDNGFTGSFEELCS 585 (660)
T ss_pred EEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEEEEEcCHHHHHHHHHhCCCCCCHHHHhc
Confidence 9999999999997 79999999999999999999999999842 346789999876421 001
Q ss_pred HHHHH----HHH-----HhcccCCCceeEEEEeec------CCCCCCcccchHHHHHHHHHhhhC
Q 039837 495 EDDIM----DFV-----ASNVATYKKVRVLHFVDG------IPKSHSGKIMRRILKDKMLEKMRK 544 (544)
Q Consensus 495 ~~~l~----~~l-----~~~l~~~~~p~~~~~~~~------~P~t~~GKi~r~~l~~~~~~~~~~ 544 (544)
..+++ +.+ ++.|+.+.++..|++.++ =.+|+++|++|+.+.+.|+++|++
T Consensus 586 ~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i~~ 650 (660)
T PLN02430 586 LPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEIDE 650 (660)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHHHH
Confidence 11122 222 235899999998888742 258999999999999999998863
No 98
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=3.2e-63 Score=500.08 Aligned_cols=431 Identities=21% Similarity=0.277 Sum_probs=357.0
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEe
Q 039837 63 AYTYAQVARDTRGFAKALRSLGL-RKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVS 141 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 141 (544)
-+.|+||.++++++|++|++.|+ ++|++|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 37899999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred ccchHHHhhcCCCcEEEecccccccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCC
Q 039837 142 YAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVP 221 (544)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~ 221 (544)
+.+..... .. .. ... . ............+||||||.||||++||+++...+......+
T Consensus 99 ~~~~~~~~---------~~-~~-----~~~----~-~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~~~-- 156 (452)
T PRK07445 99 LDQLKLSH---------PP-PL-----PSQ----G-ILPNLETGWIMIPTGGSSGQIRFAIHTWETLTASVQGFQRYF-- 156 (452)
T ss_pred cCcccccc---------CC-CC-----Ccc----c-cCCCCCCcEEEEeCCCCCCCCcEEEechHHHHHHHHHHHHHh--
Confidence 76532110 00 00 000 0 011122334567899999999999999999988887766555
Q ss_pred cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccc
Q 039837 222 EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSK 301 (544)
Q Consensus 222 ~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 301 (544)
+... +..++.+|++|.+|+ ..++.++..|+++++.+.............++++++.++|+++..+++.. ...+++
T Consensus 157 ~~~~-~~~~~~~Pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~---~~~l~~ 231 (452)
T PRK07445 157 QLQQ-VNSFCVLPLYHVSGL-MQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLR---PQWLAQ 231 (452)
T ss_pred cCCC-CceEeccCchhhhhH-HHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhhC---hhhhhc
Confidence 4443 357889999999998 56778999999999887432222233345688999999999999998632 234566
Q ss_pred cccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCc
Q 039837 302 LQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKS 381 (544)
Q Consensus 302 l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~ 381 (544)
++. +++||+++++++.+++.+ + ++++++.||+||++..+.... + ........++|+|+++++++|+
T Consensus 232 l~~--i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~~-~--~~~~~~~~~~G~~~p~~~v~i~------- 297 (452)
T PRK07445 232 FRT--ILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATLK-P--DDFLAGNNSSGQVLPHAQITIP------- 297 (452)
T ss_pred ceE--EEECCccCCHHHHHHHHh-c-CCeEecCcchhhhcccccccC-c--hhhccCCCcCCccCCCCeEEEc-------
Confidence 666 999999999999998876 4 889999999999986544322 0 0012245679999999999997
Q ss_pred CCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcC
Q 039837 382 LPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTH 461 (544)
Q Consensus 382 ~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 461 (544)
.|+.|||+++|+.++.||++++. ..++||+|||+|++|+||++++.||.||+||++|++|+|.+||++|.+|
T Consensus 298 --~g~~Gel~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~ 369 (452)
T PRK07445 298 --ANQTGNITIQAQSLALGYYPQIL------DSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEVEAAILAT 369 (452)
T ss_pred --CCCcceEEEeCCccchhhcCCcc------CCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhC
Confidence 36779999999999999998542 2578999999999999999999999999999999999999999999999
Q ss_pred CCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 462 PSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 462 ~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
|+|.+++|++.+++..|+.++++++..++ ..+.++++++++++|+.+++|..++++++||+|++||++|++|++++.++
T Consensus 370 p~V~~a~V~g~~~~~~g~~~~a~vv~~~~-~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 448 (452)
T PRK07445 370 GLVQDVCVLGLPDPHWGEVVTAIYVPKDP-SISLEELKTAIKDQLSPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQR 448 (452)
T ss_pred CCcceEEEEeccCcCCCcEEEEEEEeCCC-CCCHHHHHHHHHHhCCcccCCeEEEEecCCCCCCCcccCHHHHHHHHHHh
Confidence 99999999999998888999999987655 45678999999999999999999999999999999999999999999998
Q ss_pred hh
Q 039837 542 MR 543 (544)
Q Consensus 542 ~~ 543 (544)
|+
T Consensus 449 ~~ 450 (452)
T PRK07445 449 LG 450 (452)
T ss_pred hC
Confidence 85
No 99
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.7e-62 Score=501.91 Aligned_cols=485 Identities=24% Similarity=0.385 Sum_probs=397.3
Q ss_pred HhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCC
Q 039837 43 LQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTA 122 (544)
Q Consensus 43 ~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 122 (544)
..+|+++|+++|+++..+++.+||.||.+++.++|++|.+.|+++|++|+++++|+++++++++||+++|++++++++.+
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~ 83 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHL 83 (511)
T ss_pred hhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecccccc
Confidence 46788899999998755578899999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCceEEEeccchHHHhhcCC-----C-cEEEecc-cccccccCHHHHHHhhhhc---CCCCCCCCCCCC
Q 039837 123 HASELKKQVDAADAKLIVSYAPIYEKVKGLG-----L-PIIVLGE-ERIESAINWSELIEAADKA---GNNFSNDDDVKQ 192 (544)
Q Consensus 123 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~-~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ts 192 (544)
+.+++.++++.++++.++++......+.+.. . ..+.++. ........+.+........ .........+||
T Consensus 84 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TS 163 (511)
T PRK13391 84 TPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAGLPATPIADESLGTDMLYSS 163 (511)
T ss_pred CHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcCCCCCCCCCcccccEEEECC
Confidence 9999999999999999999877655443221 1 1122221 1111122223222111100 111223568999
Q ss_pred CCCcCcceeec--cHHHHHHH---HHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHH
Q 039837 193 TDLWISKGVML--THRNLVAN---LCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFL 267 (544)
Q Consensus 193 gttG~PKgV~~--t~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~ 267 (544)
||||.||||++ +|.++... .......+ .+...++++..+|++|.+++ ...+.++..|+++++.+.+++..++
T Consensus 164 GtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~p~~h~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~ 240 (511)
T PRK13391 164 GTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLW--GFRSDMVYLSPAPLYHSAPQ-RAVMLVIRLGGTVIVMEHFDAEQYL 240 (511)
T ss_pred CCCCCCCEEEEccccchhhhhhHHHHHHHHhc--CCCCCCeEEEcCCHHHHHHH-HHHHHHHHcCceEEECCCCCHHHHH
Confidence 99999999995 46655322 22233333 56788899999999999887 4567788999999999888999999
Q ss_pred HHHHHcCceeeecchHHHHHHhcCCCC--CccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCcccccccc
Q 039837 268 DALITHEVTFAPIVPPIILSLVKDPIV--DEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITL 345 (544)
Q Consensus 268 ~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~ 345 (544)
+.++++++|++.++|+++..+++.... ...++++++. +++||+++++++.+++.+.+ +..+++.||+||++.+..
T Consensus 241 ~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~--~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~ 317 (511)
T PRK13391 241 ALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEV--AIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEGLGFTA 317 (511)
T ss_pred HHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeE--EEEccCCCCHHHHHHHHHHc-CCceeeeeccccccceEE
Confidence 999999999999999999988765431 2334666666 99999999999999999988 788999999999987654
Q ss_pred ccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCC-CeeecCceE
Q 039837 346 TYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKN-GWLHTGDIG 424 (544)
Q Consensus 346 ~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~-~~~~TGD~~ 424 (544)
... .......+++|+|+++ .++++| +++.+++.|+.|||+++|+ ++.||+++++.+...+..+ +||+|||+|
T Consensus 318 ~~~----~~~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g 390 (511)
T PRK13391 318 CDS----EEWLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIG 390 (511)
T ss_pred ecC----ccccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEE
Confidence 322 1122345789999999 689999 6889999999999999999 8899999999998877554 999999999
Q ss_pred EEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCC---CCHHHHHHH
Q 039837 425 YIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAK---ESEDDIMDF 501 (544)
Q Consensus 425 ~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~ 501 (544)
+++++|.+++.||.+|++|++|.++++.+||++|.++|.|.+++|++.+++..++.+++++++.++.. ...+++.++
T Consensus 391 ~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 470 (511)
T PRK13391 391 YVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPGPALAAELIAF 470 (511)
T ss_pred EECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCCcccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888888899888765432 234789999
Q ss_pred HHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 502 VASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 502 l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
++++++.+++|..+++++++|+|++||++|+.|++.|..
T Consensus 471 ~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 471 CRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred HHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 999999999999999999999999999999999998864
No 100
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2.6e-63 Score=495.14 Aligned_cols=485 Identities=27% Similarity=0.373 Sum_probs=379.7
Q ss_pred CCCCCCHHHHHHhhhhhcCCceEEEEccCC--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHH
Q 039837 32 VPENVTLPDFVLQDAELYADKVAFVEAVSG--KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIM 109 (544)
Q Consensus 32 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~ 109 (544)
.....++..++.++++.+|+.+++.....+ ..+||+|+.+++.++|.+|+..|+..||+|+|++.|+++|+++.+||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~ 91 (613)
T COG1022 12 VAEIHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAIL 91 (613)
T ss_pred hhhcccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 345568999999999999999898865433 689999999999999999999999779999999999999999999999
Q ss_pred HhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhc-CCC--c-EEE----ec---cc-----------ccccc
Q 039837 110 AAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKG-LGL--P-IIV----LG---EE-----------RIESA 167 (544)
Q Consensus 110 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~-~~~--~-~~~----~~---~~-----------~~~~~ 167 (544)
.+|++.||+.++.++++++++|+.++++++|++......... ... + +.. .+ .. ...+.
T Consensus 92 ~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (613)
T COG1022 92 ALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGI 171 (613)
T ss_pred HcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccc
Confidence 999999999999999999999999999999998754433222 111 0 000 00 00 00001
Q ss_pred cCHHHHHHhh-----hhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHH
Q 039837 168 INWSELIEAA-----DKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGIT 242 (544)
Q Consensus 168 ~~~~~~~~~~-----~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 242 (544)
..+ ...... ........+.+.+||||||.||||++||+|+++++......+. ....+|+.++++|+.|++..+
T Consensus 172 ~~~-~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~-~~~~~d~~LsfLPlaHi~Er~ 249 (613)
T COG1022 172 SLF-LIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP-PIGPGDRVLSFLPLAHIFERA 249 (613)
T ss_pred hhh-hhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC-CCCCCcEEEEeCcHHHHHHHH
Confidence 111 000000 0122333446789999999999999999999999999988873 378999999999999999986
Q ss_pred HHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCC--------CC--------------------
Q 039837 243 GICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDP--------IV-------------------- 294 (544)
Q Consensus 243 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--------~~-------------------- 294 (544)
+.....+..|.++.. ..++..+++.++..+||.++++|..|+.+.+.. ..
T Consensus 250 ~~~~~~~~~g~~~~~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~ 327 (613)
T COG1022 250 FEGGLALYGGVTVLF--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRAL 327 (613)
T ss_pred HHHHHHhhcceEEEe--cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhh
Confidence 555555555555554 347999999999999999999999987763210 00
Q ss_pred -C------------------ccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCC
Q 039837 295 -D------------------EFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSA 355 (544)
Q Consensus 295 -~------------------~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~ 355 (544)
. ...+. =+++.+++||+++++++...++.. ++++.++||+||++..++..+ ..
T Consensus 328 ~~~~~~~~~~~~d~LVf~Kir~~lG-gri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~~-----~~ 399 (613)
T COG1022 328 LGGGPLSWLLVADRLVFRKIRDALG-GRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVNP-----PD 399 (613)
T ss_pred cccCCcchhhhhhHHHHHHHHHHhC-CcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEcc-----cc
Confidence 0 00011 135559999999999999999887 899999999999998888763 37
Q ss_pred CCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEE
Q 039837 356 GSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIV 435 (544)
Q Consensus 356 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~ 435 (544)
....+++|+|+|+++++|+|. |||+|+||.+|.|||++|+.|.+.|+.||||+|||+|.++++|++++.
T Consensus 400 ~~~~gtvG~p~p~~evKI~d~-----------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~ 468 (613)
T COG1022 400 RFVLGTVGKPLPGIEVKIADD-----------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVIT 468 (613)
T ss_pred CcccCCcCCcCCCceEEEccC-----------ceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEe
Confidence 788899999999999999983 999999999999999999999999999999999999999999999999
Q ss_pred eecCCceee-cceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCC------------CCH------H
Q 039837 436 DRIKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAK------------ESE------D 496 (544)
Q Consensus 436 GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~------------~~~------~ 496 (544)
||++|+||. +|++|.|..||..+.++|.|.+++|++ .++ ..+.|++++..+.- .+. .
T Consensus 469 gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~k---~~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~ 544 (613)
T COG1022 469 GRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DDK---KFLVALIVPDFDALEKWAESLNKVISASREELARDP 544 (613)
T ss_pred ecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEe-cCC---cceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCH
Confidence 999999998 899999999999999999999999998 333 46888888765310 111 1
Q ss_pred HHHHHH-------HhcccCCCceeEEEEe-e-----cCCCCCCcccchHHHHHHHHHhhh
Q 039837 497 DIMDFV-------ASNVATYKKVRVLHFV-D-----GIPKSHSGKIMRRILKDKMLEKMR 543 (544)
Q Consensus 497 ~l~~~l-------~~~l~~~~~p~~~~~~-~-----~~P~t~~GKi~r~~l~~~~~~~~~ 543 (544)
++++.. ...+..+..+..+... . .--.|++-|++|..+.+.|+++++
T Consensus 545 ~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~i~ 604 (613)
T COG1022 545 KLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDEIE 604 (613)
T ss_pred HHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhHHH
Confidence 222221 1123444555555554 2 234589999999999999988775
No 101
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.3e-62 Score=502.76 Aligned_cols=472 Identities=27% Similarity=0.426 Sum_probs=393.3
Q ss_pred CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEE
Q 039837 60 SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLI 139 (544)
Q Consensus 60 ~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 139 (544)
.++.+||.||.+.+.++|++|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++
T Consensus 8 ~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~i 87 (502)
T PRK08276 8 SGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVL 87 (502)
T ss_pred CCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEE
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccchHHHhhcC------CCcEEEecccccccccCHHHHHHhhhh---cCCCCCCCCCCCCCCCcCcceeeccHHHHHH
Q 039837 140 VSYAPIYEKVKGL------GLPIIVLGEERIESAINWSELIEAADK---AGNNFSNDDDVKQTDLWISKGVMLTHRNLVA 210 (544)
Q Consensus 140 i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~ 210 (544)
++++.....+... ....+.+.+........++........ ..........+||||||.||+|+++|.++..
T Consensus 88 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~~~~~~~~ 167 (502)
T PRK08276 88 IVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAAQPDTPIADETAGADMLYSSGTTGRPKGIKRPLPGLDP 167 (502)
T ss_pred EEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhcCCCCCCCCCCcceEEEECCCCCCCCceEEEccCCcch
Confidence 9988766654332 233333332222222334433322111 1112234678999999999999998877543
Q ss_pred HH------HhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHH
Q 039837 211 NL------CSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPI 284 (544)
Q Consensus 211 ~~------~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~ 284 (544)
.. ....... .....++++...|++|..++.. .+.++..|+++++.+.+++..+++.++++++|++.++|++
T Consensus 168 ~~~~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~ 244 (502)
T PRK08276 168 DEAPGMMLALLGFGM--YGGPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVMEKFDAEEALALIERYRVTHSQLVPTM 244 (502)
T ss_pred hhhhHHhhhhhhhcc--cCCCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcCCCCHHHHHHHHHHhCCeEEEehHHH
Confidence 22 1111111 2346788999999999998744 4578999999999988899999999999999999999999
Q ss_pred HHHHhcCCCC--CccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcc
Q 039837 285 ILSLVKDPIV--DEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSV 362 (544)
Q Consensus 285 ~~~l~~~~~~--~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~ 362 (544)
+..+++.... ...++++++. ++++|++++.++++++.+.+ +..+++.||+||++.+++... .......+++
T Consensus 245 ~~~l~~~~~~~~~~~~~~~lr~--i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~----~~~~~~~~~~ 317 (502)
T PRK08276 245 FVRMLKLPEEVRARYDVSSLRV--AIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITS----EDWLAHPGSV 317 (502)
T ss_pred HHHHHhCccccCCCCCcccceE--EEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecC----ccccccCCCc
Confidence 9999876542 2345677777 99999999999999999988 788999999999987555432 1122345689
Q ss_pred cccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCce
Q 039837 363 GFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELI 442 (544)
Q Consensus 363 G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i 442 (544)
|+|+ ++.++++| +++.+++.|+.|||+++|+.++.||+++++.+...+..++||+|||+++++++|.+++.||.+|++
T Consensus 318 G~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i 395 (502)
T PRK08276 318 GKAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMI 395 (502)
T ss_pred ceec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceE
Confidence 9999 88999999 578899999999999999999999999999999888777999999999999999999999999999
Q ss_pred eecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCH---HHHHHHHHhcccCCCceeEEEEee
Q 039837 443 KYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESE---DDIMDFVASNVATYKKVRVLHFVD 519 (544)
Q Consensus 443 ~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~ 519 (544)
+++|.++++.+||.+|.++|+|.++++++..++..++.+++++++.++...+. +.+.+.++++++.+++|..+++++
T Consensus 396 ~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~ 475 (502)
T PRK08276 396 ISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAGDALAAELIAWLRGRLAHYKCPRSIDFED 475 (502)
T ss_pred EeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCChhhHHHHHHHHHhhccCCCCCcEEEEec
Confidence 99999999999999999999999999999998888899999999876544333 478999999999999999999999
Q ss_pred cCCCCCCcccchHHHHHHHHHhhh
Q 039837 520 GIPKSHSGKIMRRILKDKMLEKMR 543 (544)
Q Consensus 520 ~~P~t~~GKi~r~~l~~~~~~~~~ 543 (544)
++|+|++||++|++|++.|.++-+
T Consensus 476 ~lP~t~~GKi~r~~L~~~~~~~~~ 499 (502)
T PRK08276 476 ELPRTPTGKLYKRRLRDRYWEGRQ 499 (502)
T ss_pred CCCCCcccchhHHHHHHHHHhhhh
Confidence 999999999999999999887654
No 102
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.4e-63 Score=518.63 Aligned_cols=493 Identities=19% Similarity=0.235 Sum_probs=380.7
Q ss_pred CCCCCCCHHHHHHhhhhhcCCceEEEEccC--C--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHH
Q 039837 31 PVPENVTLPDFVLQDAELYADKVAFVEAVS--G--KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVAL 106 (544)
Q Consensus 31 ~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~--~--~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~l 106 (544)
+.....|+.+.|+++|+++|+++|+++... + +.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++
T Consensus 44 ~~~~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~l 123 (624)
T PRK12582 44 LGPYPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTL 123 (624)
T ss_pred CCCcccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHH
Confidence 344567899999999999999999986421 1 689999999999999999999999999999999999999999999
Q ss_pred HHHHhcCeeecCCCCCCH-----HHHHHHHHhcCceEEEeccch-H-HHh---hcCCCcEEEecccc-cccccCHHHHHH
Q 039837 107 GIMAAGGVFSGANPTAHA-----SELKKQVDAADAKLIVSYAPI-Y-EKV---KGLGLPIIVLGEER-IESAINWSELIE 175 (544)
Q Consensus 107 A~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~-~-~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~ 175 (544)
||+++|++++|+++.++. +++.++++.++++++|++... . ..+ .......+.++... ......+.++..
T Consensus 124 A~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 203 (624)
T PRK12582 124 AAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGIASIAFADLAA 203 (624)
T ss_pred HHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCcccccccHHHHhh
Confidence 999999999999999874 899999999999999997642 1 111 11123344433211 111223333332
Q ss_pred hhh---------hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCccc---CccEEEEecchhHHHHHHH
Q 039837 176 AAD---------KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMI---GQVTTLGLIPFFHIYGITG 243 (544)
Q Consensus 176 ~~~---------~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~g~~~ 243 (544)
... .........+.+||||||.||||++||+++.+......... ... ..++++.++|++|.+|+..
T Consensus 204 ~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~~~~~~~l~~lPl~h~~g~~~ 281 (624)
T PRK12582 204 TPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLR--PREPDPPPPVSLDWMPWNHTMGGNA 281 (624)
T ss_pred cCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhc--cccCCCCCceEEEechHHHHHhHHH
Confidence 110 01122334578999999999999999999988776554333 222 2578999999999999877
Q ss_pred HHHhhHhccceEEEcCc-cCH---HHHHHHHHHcCceeeecchHHHHHHhcCCCCC----ccCccccccccEEEecCCCC
Q 039837 244 ICCATLRNKGKVVMMNR-FEL---RAFLDALITHEVTFAPIVPPIILSLVKDPIVD----EFDLSKLQLRAVMTAAAPLA 315 (544)
Q Consensus 244 ~~~~~l~~G~~~~~~~~-~~~---~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----~~~~~~l~~~~v~~~G~~~~ 315 (544)
.++.++..|+++++.+. +.+ ..+++.++++++|+++++|+++..|++..... ...++++|. +++||++++
T Consensus 282 ~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~--i~~gGa~l~ 359 (624)
T PRK12582 282 NFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRL--MAYGGATLS 359 (624)
T ss_pred HHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeE--EEecCCCCC
Confidence 77889999999998753 333 45677788999999999999999887532211 123566666 999999999
Q ss_pred HhHHHHHHhhc-----CCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceE
Q 039837 316 PDLLSSFEKKF-----PGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGEL 390 (544)
Q Consensus 316 ~~~~~~~~~~~-----~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel 390 (544)
+++.++|.+.+ +++.+++.||+||++.++.... . .....+++|+|++|+++++++ .|+.|||
T Consensus 360 ~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~----~-~~~~~~svG~p~pg~~v~i~~--------~G~~GEl 426 (624)
T PRK12582 360 DDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTH----W-DTERVGLIGLPLPGVELKLAP--------VGDKYEV 426 (624)
T ss_pred HHHHHHHHHHHHhhcCCCceEEeccccccccceeeccc----C-CCCCCCCCCcCCCCcEEEEcc--------CCCceEE
Confidence 99999998863 1468999999999987654321 1 224567899999999999964 3778999
Q ss_pred EEecccccccccCChhhhhcccCCCCeeecCceEEE-c---CCCcEEEEeecCCceee-cceeeChHHHH--HHHhcCCC
Q 039837 391 CVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYI-D---DDGDIFIVDRIKELIKY-KGFQVAPAELE--AILLTHPS 463 (544)
Q Consensus 391 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~-~---~~g~~~~~GR~~d~i~~-~G~~v~~~~iE--~~l~~~~~ 463 (544)
+++|++++.|||++|+.|.+.|+.+|||+|||+|++ | ++|++++.||.+|+|++ +|++|+|.+|| .++.+||.
T Consensus 427 ~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~ 506 (624)
T PRK12582 427 RVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPV 506 (624)
T ss_pred EEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcc
Confidence 999999999999999999999988999999999998 4 46999999999999996 89999999885 68899999
Q ss_pred ccceEEEeecCCCCCceeEEEEEeCC----------CC----CCCHHHHHHHHHhcccCC-------C-ceeEEEEeecC
Q 039837 464 VEDAAVVSLPDEEAGEIPAACVVMNP----------NA----KESEDDIMDFVASNVATY-------K-KVRVLHFVDGI 521 (544)
Q Consensus 464 v~~~~v~~~~~~~~~~~~~~~v~~~~----------~~----~~~~~~l~~~l~~~l~~~-------~-~p~~~~~~~~~ 521 (544)
|.+++|++++++..+ +++++.. +. ..+.+++.++++..|..+ . +|..+++++++
T Consensus 507 V~~a~VvG~~~~~~g----~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 582 (624)
T PRK12582 507 IHDAVVAGQDRAFIG----LLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNAEAGGSSSRIARALLMTEP 582 (624)
T ss_pred hheEEEEcCCCCcEE----EEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHhhcCCChhheEEEEEeCCC
Confidence 999999998766433 3433221 10 013355666665555444 4 99999999776
Q ss_pred C------CCCCcccchHHHHHHHHHhhhC
Q 039837 522 P------KSHSGKIMRRILKDKMLEKMRK 544 (544)
Q Consensus 522 P------~t~~GKi~r~~l~~~~~~~~~~ 544 (544)
| +|++||++|+.+.+.|+++|++
T Consensus 583 ~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ 611 (624)
T PRK12582 583 PSIDAGEITDKGYINQRAVLERRAALVER 611 (624)
T ss_pred CCccCCcCCccccccHHHHHHHHHHHHHH
Confidence 5 4678889999999999999863
No 103
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-62 Score=499.21 Aligned_cols=454 Identities=21% Similarity=0.292 Sum_probs=380.5
Q ss_pred CHHHHH-HhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCee
Q 039837 37 TLPDFV-LQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF 115 (544)
Q Consensus 37 ~l~~~l-~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 115 (544)
++.+.+ ..+|+++|+++|+.+. ++.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~ 80 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRLN--DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARV 80 (458)
T ss_pred hhhcChHHHHHHhCCCceeeecC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEE
Confidence 444444 4668999999999875 7899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHHhhhhcCCCCCCCCCCCCCCC
Q 039837 116 SGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAADKAGNNFSNDDDVKQTDL 195 (544)
Q Consensus 116 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgtt 195 (544)
+|+++..+.+++..+++.+++++++++++... +... ........ .. ...............+|||||
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~--~~~~~~~~--~~--------~~~~~~~~~~~a~i~~TSGTT 147 (458)
T PRK09029 81 LPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSAL--TSLHLQLV--EG--------AHAVAWQPQRLATMTLTSGST 147 (458)
T ss_pred eecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhc--cccccccc--cc--------cCcccCCCCCeEEEEECCCCC
Confidence 99999999999999999999999998766432 1110 00000000 00 000011122234678999999
Q ss_pred cCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCc
Q 039837 196 WISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDALITHEV 275 (544)
Q Consensus 196 G~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~ 275 (544)
|.||||.+||+++...+......+ +...+++++..+|++|.+|+ ..++.++..|+++++.+. ..+.+.+ .++
T Consensus 148 G~PKgv~~s~~~~~~~~~~~~~~~--~~~~~~~~l~~~p~~h~~g~-~~~~~~l~~G~~v~~~~~---~~~~~~i--~~~ 219 (458)
T PRK09029 148 GLPKAAVHTAQAHLASAEGVLSLM--PFTAQDSWLLSLPLFHVSGQ-GIVWRWLYAGATLVVRDK---QPLEQAL--AGC 219 (458)
T ss_pred CCCCEEEEeHHHHHHHHHHHhhcC--CCCccceEEEecCcHhhhhh-HHHHHHHhCCceEEeCCh---HHHHHHH--hhc
Confidence 999999999999999988877766 67888999999999999997 466778999999998774 4566666 378
Q ss_pred eeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCC
Q 039837 276 TFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSA 355 (544)
Q Consensus 276 t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~ 355 (544)
|.+..+|+++..|+..... ..+++. +++||+++++.+.+.+.+. ++++++.||+||++...+...
T Consensus 220 t~~~~~P~~~~~l~~~~~~----~~~l~~--i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~------- 284 (458)
T PRK09029 220 THASLVPTQLWRLLDNRSE----PLSLKA--VLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVCAKR------- 284 (458)
T ss_pred eeeecChHHHHHHHhcccc----CCcceE--EEECCCCCCHHHHHHHHHc--CCcEeccccccccCcceeccC-------
Confidence 9999999999999876432 234555 9999999999999998864 899999999999986554322
Q ss_pred CCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEE
Q 039837 356 GSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIV 435 (544)
Q Consensus 356 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~ 435 (544)
.....++|+|++++.+++++ |||+++|+.++.||+++++.+.... .++||+|||+|+++ +|.+++.
T Consensus 285 ~~~~~~~G~~~~~~~~~i~~------------gel~v~g~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~-~g~l~~~ 350 (458)
T PRK09029 285 ADGLAGVGSPLPGREVKLVD------------GEIWLRGASLALGYWRQGQLVPLVN-DEGWFATRDRGEWQ-NGELTIL 350 (458)
T ss_pred CCCCCCCCCCCCCCEEEEeC------------CEEEEecCceeeeeecCcccccccc-CCCccCCCCcEEEe-CCEEEEe
Confidence 12234699999999999986 8999999999999999888775443 67999999999998 9999999
Q ss_pred eecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEE
Q 039837 436 DRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVL 515 (544)
Q Consensus 436 GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~ 515 (544)
||++|+||++|.+|+|.+||++|+++|+|.+++|++.+++..++.++++++... ..+.+++.++++++|+.|++|..+
T Consensus 351 gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~--~~~~~~l~~~~~~~l~~~~~P~~~ 428 (458)
T PRK09029 351 GRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDS--EAAVVNLAEWLQDKLARFQQPVAY 428 (458)
T ss_pred cccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCc--ccCHHHHHHHHHhhchhccCCeEE
Confidence 999999999999999999999999999999999999999888899999988653 457789999999999999999999
Q ss_pred EEeecCCCCCCcccchHHHHHHHHHhhhC
Q 039837 516 HFVDGIPKSHSGKIMRRILKDKMLEKMRK 544 (544)
Q Consensus 516 ~~~~~~P~t~~GKi~r~~l~~~~~~~~~~ 544 (544)
++++++|+|.+||++|+.|++++.+..++
T Consensus 429 ~~~~~~p~t~~gKi~r~~L~~~~~~~~~~ 457 (458)
T PRK09029 429 YLLPPELKNGGIKISRQALKEWVAQQLGN 457 (458)
T ss_pred EEecccccCcCCCcCHHHHHHHHHhccCC
Confidence 99999999999999999999999887654
No 104
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-61 Score=498.59 Aligned_cols=495 Identities=25% Similarity=0.386 Sum_probs=398.0
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
+++..+.|++.++.+|+++|+.+. +..+||+||.+++.++|.+|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~ 94 (545)
T PRK08162 17 PLTPLSFLERAAEVYPDRPAVIHG--DRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAV 94 (545)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEEC--CeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcE
Confidence 468889999999999999999886 689999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC----C-CcEEEeccccc-------ccccCHHHHHHhhhhc--
Q 039837 115 FSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL----G-LPIIVLGEERI-------ESAINWSELIEAADKA-- 180 (544)
Q Consensus 115 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-- 180 (544)
++|++++++.+++..+++.++++.++++.+....+.+. . ...+.++.... .....++.+.......
T Consensus 95 ~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (545)
T PRK08162 95 LNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDPDFA 174 (545)
T ss_pred EeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCcccc
Confidence 99999999999999999999999999998876655431 1 11222221110 1122344333221110
Q ss_pred -----CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceE
Q 039837 181 -----GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKV 255 (544)
Q Consensus 181 -----~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~ 255 (544)
.........+||||||.||||+++|+++...+......+ .+..+++++..+|++|..++...++..+. |++.
T Consensus 175 ~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~--~~~~~~~~l~~~pl~h~~~~~~~~~~~~~-~g~~ 251 (545)
T PRK08162 175 WTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAW--GMPKHPVYLWTLPMFHCNGWCFPWTVAAR-AGTN 251 (545)
T ss_pred ccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc--CCCCCCeeEeccCcHhhhhHHHHHHHHHH-ccEE
Confidence 001123467899999999999999998876665554444 56778899999999999988655555554 4455
Q ss_pred EEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecc
Q 039837 256 VMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAY 335 (544)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 335 (544)
++...+++..+++.++++++|++.++|+++..|++........+...+. ++++|+.+++++.+.+.+. ++++++.|
T Consensus 252 ~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~--~~~~~~~Y 327 (545)
T PRK08162 252 VCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVH--AMVAGAAPPAAVIAKMEEI--GFDLTHVY 327 (545)
T ss_pred EEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceE--EEECCCCCCHHHHHHHHHh--CCceeecc
Confidence 5556689999999999999999999999999998765433333444334 7899999999999998874 89999999
Q ss_pred cCccccccccccCCCCCC------CCCCCCCcccccCCC-ceEEEEeCCCCCcCCC-C-CCceEEEecccccccccCChh
Q 039837 336 GLTEHSCITLTYGDPANP------SAGSKKNSVGFILPN-LEVKFINPETGKSLPS-N-TPGELCVRSQCVMQGYYNNEE 406 (544)
Q Consensus 336 G~tE~~~~~~~~~~~~~~------~~~~~~~~~G~~~~~-~~~~i~d~~~~~~~~~-g-~~Gel~v~~~~~~~gy~~~~~ 406 (544)
|+||++..+..+...... .......+.|.+.+. ..++++|++++.+++. | +.|||+++|+.++.||+++++
T Consensus 328 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~ 407 (545)
T PRK08162 328 GLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPK 407 (545)
T ss_pred cccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCChh
Confidence 999986544432211000 001122445655543 3578888777888876 3 469999999999999999999
Q ss_pred hhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEE
Q 039837 407 ETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVV 486 (544)
Q Consensus 407 ~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 486 (544)
.+...| .++||+|||+|+++++|.+++.||.+|++|++|.+++|.+||+.|.++|+|.+++|++.+++..++.++++++
T Consensus 408 ~~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~ 486 (545)
T PRK08162 408 ATEEAF-AGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAFVE 486 (545)
T ss_pred hhHHHh-hCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEEEE
Confidence 999888 6789999999999999999999999999999999999999999999999999999999988877888999999
Q ss_pred eCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 487 MNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 487 ~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
+.++...+.+++.+++++.|+.+++|..+++ .+||+|.+||++|+.|++++.+
T Consensus 487 ~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~~ 539 (545)
T PRK08162 487 LKDGASATEEEIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLREQAKS 539 (545)
T ss_pred eCCCCCCCHHHHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHHHHHhh
Confidence 8877667889999999999999999998865 6899999999999999998754
No 105
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.7e-61 Score=495.61 Aligned_cols=473 Identities=25% Similarity=0.385 Sum_probs=391.0
Q ss_pred EEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHh
Q 039837 54 AFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDA 133 (544)
Q Consensus 54 a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~ 133 (544)
|+++. ++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++++++.++.+++.++++.
T Consensus 4 ~~~~~--~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~ 81 (509)
T PRK12406 4 TIISG--DRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILED 81 (509)
T ss_pred EEEEC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhc
Confidence 45554 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEeccchHHHhhcCC---CcEEEeccc---------------ccccccCHHHHHHhhh---hcCCCCCCCCCCCC
Q 039837 134 ADAKLIVSYAPIYEKVKGLG---LPIIVLGEE---------------RIESAINWSELIEAAD---KAGNNFSNDDDVKQ 192 (544)
Q Consensus 134 ~~~~~ii~~~~~~~~~~~~~---~~~~~~~~~---------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ts 192 (544)
+++++++++......+.+.. ...+..... .......+++...... ...........+||
T Consensus 82 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TS 161 (509)
T PRK12406 82 SGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEPYDGPPVPQPQSMIYTS 161 (509)
T ss_pred cCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCccCCCCCCCceEEEECC
Confidence 99999999877666543221 112111100 0111223333322111 11223344678999
Q ss_pred CCCcCcceeeccHHHHH---HHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHH
Q 039837 193 TDLWISKGVMLTHRNLV---ANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDA 269 (544)
Q Consensus 193 gttG~PKgV~~t~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~ 269 (544)
||||.||+|.++|.+.. .........+ ++..+++++..+|++|..+... .+.++..|+++++.+..++..+++.
T Consensus 162 GtTG~PK~v~~s~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (509)
T PRK12406 162 GTTGHPKGVRRAAPTPEQAAAAEQMRALIY--GLKPGIRALLTGPLYHSAPNAY-GLRAGRLGGVLVLQPRFDPEELLQL 238 (509)
T ss_pred CCCCCCceEEEechhHHHHHHHHHhhhhhc--CCCCCceEEEEeCCcccchHHH-HHHHHhhheEEEEccCCCHHHHHHH
Confidence 99999999998766543 3333333344 6678899999999999887644 4456788999999888899999999
Q ss_pred HHHcCceeeecchHHHHHHhcCCC--CCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCcccccccccc
Q 039837 270 LITHEVTFAPIVPPIILSLVKDPI--VDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTY 347 (544)
Q Consensus 270 i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~ 347 (544)
++++++|++.++|+++..|++... ....++++++. +++||+++++++++++.+.+ ++.+++.||+||++.+++..
T Consensus 239 l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~--v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~ 315 (509)
T PRK12406 239 IERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRH--VIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGAVTFAT 315 (509)
T ss_pred HHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeE--EEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCceEecC
Confidence 999999999999999999987543 23345677766 99999999999999999988 78899999999999765533
Q ss_pred CCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccc-cccCChhhhhcccCCCCeeecCceEEE
Q 039837 348 GDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQ-GYYNNEEETARTIDKNGWLHTGDIGYI 426 (544)
Q Consensus 348 ~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~-gy~~~~~~~~~~~~~~~~~~TGD~~~~ 426 (544)
. .......+++|.|++++.++++| +++++++.|+.|||+++|+.++. +|+++++.+...+ .++||+|||++++
T Consensus 316 ~----~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~-~~~~~~TGD~~~~ 389 (509)
T PRK12406 316 S----EDALSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEID-RGGFITSGDVGYL 389 (509)
T ss_pred c----ccccccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCccccccccCCchhccccc-CCCCeEEccEEEE
Confidence 2 11223457899999999999999 57899999999999999998875 8999988887665 7899999999999
Q ss_pred cCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcc
Q 039837 427 DDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNV 506 (544)
Q Consensus 427 ~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 506 (544)
+++|.+++.||.+|++|++|.+|++.+||+.|+++++|.++++++.++...++.+++++++.++...+.+++.+.+++.+
T Consensus 390 ~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 469 (509)
T PRK12406 390 DADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGATLDEADIRAQLKARL 469 (509)
T ss_pred cCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCCCCHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999998887788899999887766668899999999999
Q ss_pred cCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 507 ATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 507 ~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
+++++|..+++++++|+|.+||++|++|++.+.+
T Consensus 470 ~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~ 503 (509)
T PRK12406 470 AGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWA 503 (509)
T ss_pred ccCCCCcEEEEeccCCCCCccchhHHHHHHHHHh
Confidence 9999999999999999999999999999998864
No 106
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=4.1e-61 Score=540.56 Aligned_cols=485 Identities=23% Similarity=0.302 Sum_probs=397.6
Q ss_pred CCCHHHHHHhhhhhcCC-ceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcC
Q 039837 35 NVTLPDFVLQDAELYAD-KVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGG 113 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~-~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 113 (544)
..++.+.+.+.++++|+ +.++.+. +++++||+||.++++++|+.|++ |+++||+|+++++|+++++++++||+++|+
T Consensus 630 ~~~~~~~l~~~~~~~~~~~~ai~~~-~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 707 (1140)
T PRK06814 630 DRTLFEALIEAAKIHGFKKLAVEDP-VNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGR 707 (1140)
T ss_pred cCCHHHHHHHHHHHcCCCCeEeECC-CCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCC
Confidence 45788899999999874 5666553 36789999999999999999975 999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHh------hcC--CCcEEEecccccccccCHHHHHH---hhh----
Q 039837 114 VFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKV------KGL--GLPIIVLGEERIESAINWSELIE---AAD---- 178 (544)
Q Consensus 114 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~---- 178 (544)
+++++++..+.+++.++++++++++++++++..+.. .+. ...++.+++.. .....++.... ...
T Consensus 708 v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 786 (1140)
T PRK06814 708 VPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVR-AQIGLADKIKGLLAGRFPLVY 786 (1140)
T ss_pred EEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhh-ccCChHHHHHHHhhccCCccc
Confidence 999999999999999999999999999987654322 111 12333333211 11111111111 000
Q ss_pred --hcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEE
Q 039837 179 --KAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVV 256 (544)
Q Consensus 179 --~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~ 256 (544)
...........+||||||.||||.+||+++.+........+ +...+|++++.+|++|.+++...++.++..|++++
T Consensus 787 ~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~ 864 (1140)
T PRK06814 787 FCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI--DFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVF 864 (1140)
T ss_pred cCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh--CCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEE
Confidence 01223334568899999999999999999998888777766 77889999999999999998778889999999999
Q ss_pred EcCc-cCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecc
Q 039837 257 MMNR-FELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAY 335 (544)
Q Consensus 257 ~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~y 335 (544)
+.+. .+...+.+.++++++|++.++|+++..+.+.. ...+++++|. +++||+++++++.+.+.+.+ ++++++.|
T Consensus 865 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~--v~~gg~~l~~~~~~~~~~~~-~~~~~~~Y 939 (1140)
T PRK06814 865 LYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRY--VFAGAEKVKEETRQTWMEKF-GIRILEGY 939 (1140)
T ss_pred EecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeE--EEEcCCcCCHHHHHHHHHHh-CCcEEecc
Confidence 8763 56778889999999999999999999987753 2345677777 99999999999999999988 89999999
Q ss_pred cCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCC
Q 039837 336 GLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKN 415 (544)
Q Consensus 336 G~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 415 (544)
|+||++..+.... + .....+++|+|++++++++.+. .+ .|+.|||+++|+.++.||+++++........+
T Consensus 940 G~TE~~~~~~~~~----~-~~~~~~~vG~p~~g~~~~~~~~-~~----~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~ 1009 (1140)
T PRK06814 940 GVTETAPVIALNT----P-MHNKAGTVGRLLPGIEYRLEPV-PG----IDEGGRLFVRGPNVMLGYLRAENPGVLEPPAD 1009 (1140)
T ss_pred ccccccceEEecC----C-CCCCCCcCCccCCCCeEEEeec-CC----CCCceEEEEeCCCcchhhcCCCCCCccccCCC
Confidence 9999987655432 1 2345678999999999999873 32 36789999999999999998765432222358
Q ss_pred CeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCH
Q 039837 416 GWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESE 495 (544)
Q Consensus 416 ~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~ 495 (544)
|||+|||+|++|+||++++.||.||+||++|++|+|.+||++|.+++.+.+++|++++++..|+.+++++. +.+.+.
T Consensus 1010 g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~---~~~~~~ 1086 (1140)
T PRK06814 1010 GWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTT---ASDATR 1086 (1140)
T ss_pred CeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEc---CCCcCH
Confidence 99999999999999999999999999999999999999999999999999999999998888888776653 344567
Q ss_pred HHHHHHHHhc-ccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHhh
Q 039837 496 DDIMDFVASN-VATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEKM 542 (544)
Q Consensus 496 ~~l~~~l~~~-l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~~ 542 (544)
+++.+++++. ++++++|..+++++++|+|++||++|++|++++.+..
T Consensus 1087 ~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 1134 (1140)
T PRK06814 1087 AAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAA 1134 (1140)
T ss_pred HHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhh
Confidence 8899999875 9999999999999999999999999999999887654
No 107
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-61 Score=504.60 Aligned_cols=493 Identities=24% Similarity=0.383 Sum_probs=375.3
Q ss_pred CCHHHHHHhhhhhcCCceEEEEcc-------CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHH
Q 039837 36 VTLPDFVLQDAELYADKVAFVEAV-------SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGI 108 (544)
Q Consensus 36 ~~l~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~ 108 (544)
+++.+.|+++|..+|+++|+++.. ..+++||+||.+++.++|++|.+.| ++||+|+++++|++++++++|||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 478899999999999999998632 1268999999999999999999999 68999999999999999999999
Q ss_pred HHhcCeeecCCC---CCCHHHHHHHHHhcCceEEEeccchHHHhhcC-------CC-cEEEecccccccccCHHHHHHhh
Q 039837 109 MAAGGVFSGANP---TAHASELKKQVDAADAKLIVSYAPIYEKVKGL-------GL-PIIVLGEERIESAINWSELIEAA 177 (544)
Q Consensus 109 ~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~ 177 (544)
+++|++++|+++ ..+.+++.++++.+++++++++++..+.+... .. .++.++......... ...
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 154 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLLDLDSPRG-----SDA 154 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeecccccccCCc-----ccc
Confidence 999999999997 45788999999999999999998776665431 11 112111100000000 000
Q ss_pred hhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhcccc-CC---cccCccEEEEecchhHHHHHHHHHHhhHhccc
Q 039837 178 DKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSV-VP---EMIGQVTTLGLIPFFHIYGITGICCATLRNKG 253 (544)
Q Consensus 178 ~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~ 253 (544)
............+||||||.||||++||+++.+.+......+ .. .....+++++++|++|.+|+...++.+++.|+
T Consensus 155 ~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~ 234 (578)
T PRK05850 155 RPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVCAPILGGC 234 (578)
T ss_pred CCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHHHHHhcCC
Confidence 111223344678999999999999999999988765543321 10 13557899999999999998888999999999
Q ss_pred eEEEcCcc----CHHHHHHHHHHcCceeeecchHHHH-HHhcCC---CCCccCccccccccEEEecCCCCHhHHHHHHhh
Q 039837 254 KVVMMNRF----ELRAFLDALITHEVTFAPIVPPIIL-SLVKDP---IVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKK 325 (544)
Q Consensus 254 ~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~-~l~~~~---~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~ 325 (544)
++++.++. ++..+++.+.++++++. .+|.++. .+.... .....++++++. ++.||+++++++.++|.+.
T Consensus 235 ~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~--~~~gg~~~~~~~~~~~~~~ 311 (578)
T PRK05850 235 PAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLG--IISGSERVHPATLKRFADR 311 (578)
T ss_pred cEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhhee--EEECcCCCCHHHHHHHHHH
Confidence 99998742 68899999999999866 4565543 333211 112334566666 9999999999999999987
Q ss_pred cC-----CCeEEecccCccccccccccCCCCCCC---------C-----------CCCCCcccccCCCceEEEEeCCCCC
Q 039837 326 FP-----GVQVQEAYGLTEHSCITLTYGDPANPS---------A-----------GSKKNSVGFILPNLEVKFINPETGK 380 (544)
Q Consensus 326 ~~-----~~~i~~~yG~tE~~~~~~~~~~~~~~~---------~-----------~~~~~~~G~~~~~~~~~i~d~~~~~ 380 (544)
|+ +..+++.||+||++..+.......... . .....++|.|. +.+++++|++++.
T Consensus 312 ~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~ 390 (578)
T PRK05850 312 FAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCI 390 (578)
T ss_pred HHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCc
Confidence 72 357999999999875443321000000 0 00112345554 5789999977788
Q ss_pred cCCCCCCceEEEecccccccccCChhhhhcccC-----------CCCeeecCceEEEcCCCcEEEEeecCCceeecceee
Q 039837 381 SLPSNTPGELCVRSQCVMQGYYNNEEETARTID-----------KNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQV 449 (544)
Q Consensus 381 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~-----------~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v 449 (544)
+++.|+.|||+++|+.++.|||++++.+.+.|. .++||+|||+|+++ +|++++.||.+|+||++|++|
T Consensus 391 ~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~~G~~i 469 (578)
T PRK05850 391 ECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIVDGRNH 469 (578)
T ss_pred CCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEECCeec
Confidence 999999999999999999999999999998874 25799999999997 999999999999999999999
Q ss_pred ChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCH------HHHHHHHHhcccC--CCceeEEEEe--e
Q 039837 450 APAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESE------DDIMDFVASNVAT--YKKVRVLHFV--D 519 (544)
Q Consensus 450 ~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~------~~l~~~l~~~l~~--~~~p~~~~~~--~ 519 (544)
+|.+||++|.+||.+ +++++++++. .++.+++++++.++...+. ..+.+.+.+.++. ...|..++++ +
T Consensus 470 ~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~~ 547 (578)
T PRK05850 470 YPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTVKREVTSAISKSHGLSVADLVLVAPG 547 (578)
T ss_pred CHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHHHHHHHHHHHHHHhCCCceEEEEeCCC
Confidence 999999999999985 5778888876 6788999998876544332 3455555555543 2346556666 4
Q ss_pred cCCCCCCcccchHHHHHHHHHh
Q 039837 520 GIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 520 ~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
.||+|.+||++|++|+++|.+.
T Consensus 548 ~iP~t~~GKi~R~~l~~~~~~~ 569 (578)
T PRK05850 548 SIPITTSGKIRRAACVEQYRQD 569 (578)
T ss_pred CcCCCCCchHHHHHHHHHHHcC
Confidence 8999999999999999998653
No 108
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-61 Score=506.45 Aligned_cols=496 Identities=22% Similarity=0.312 Sum_probs=394.1
Q ss_pred CCCCCCCCCCHHHHHHhhhhhcCCceEEEEccC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHH
Q 039837 28 PAVPVPENVTLPDFVLQDAELYADKVAFVEAVS--GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVA 105 (544)
Q Consensus 28 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~--~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~ 105 (544)
-+++.+...|+.++|+..++.+|+..++ +... .+.+||.||..++.++|++|++.|+++||+|+++++|++++++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~ 91 (579)
T PRK09192 13 LPRRYADFPTLVEALDYAALGEAGMNFY-DRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAF 91 (579)
T ss_pred ccccccchhhHHHHHHHhhccCCceEEE-ecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHH
Confidence 3455677789999999999999866654 4322 267999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeeecCCCCCC-------HHHHHHHHHhcCceEEEeccchHHHhhcCC--CcEEEecccccccccCHHHHHHh
Q 039837 106 LGIMAAGGVFSGANPTAH-------ASELKKQVDAADAKLIVSYAPIYEKVKGLG--LPIIVLGEERIESAINWSELIEA 176 (544)
Q Consensus 106 lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 176 (544)
+||+++|++++|+++..+ .+++.++++.++++++++++.....+.... .....+ ..+..+...
T Consensus 92 lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 163 (579)
T PRK09192 92 FACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHV--------LSHAWFKAL 163 (579)
T ss_pred HHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccccce--------eehhhhccc
Confidence 999999999999987543 589999999999999999987665554321 111100 011111000
Q ss_pred h------hhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhcc-ccCCcccCccEEEEecchhHHHHHHHHHHhhH
Q 039837 177 A------DKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLF-SVVPEMIGQVTTLGLIPFFHIYGITGICCATL 249 (544)
Q Consensus 177 ~------~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l 249 (544)
. ..........+.+||||||.||||.+||+++...+..... .+ +...+++++.++|++|.+|+...++.++
T Consensus 164 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~--~~~~~d~~l~~~p~~h~~g~~~~~~~~l 241 (579)
T PRK09192 164 PEADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGL--KVRPGDRCVSWLPFYHDMGLVGFLLTPV 241 (579)
T ss_pred CCCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcc--cCCCCCeEEEeCCCCCcchhHHHHHHHH
Confidence 0 0111122345688999999999999999999988877665 55 7788999999999999999877788889
Q ss_pred hccceEEEcCc----cCHHHHHHHHHHcCceeeecchHHHHHHhcCCC---CCccCccccccccEEEecCCCCHhHHHHH
Q 039837 250 RNKGKVVMMNR----FELRAFLDALITHEVTFAPIVPPIILSLVKDPI---VDEFDLSKLQLRAVMTAAAPLAPDLLSSF 322 (544)
Q Consensus 250 ~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~~~~~l~~~~v~~~G~~~~~~~~~~~ 322 (544)
..|+++++.+. .++..+++.+.+++++++...|..+..+..... ....++++++. +++||+++++.+.++|
T Consensus 242 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~--~~~gG~~l~~~~~~~~ 319 (579)
T PRK09192 242 ATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRV--AGIGADMIRPDVLHQF 319 (579)
T ss_pred HhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhhe--eEecCccCCHHHHHHH
Confidence 99999877652 267889999999999988776555554443221 12345667666 9999999999999999
Q ss_pred HhhcCC-----CeEEecccCccccccccccCCCCCC-----------------------CCCCCCCcccccCCCceEEEE
Q 039837 323 EKKFPG-----VQVQEAYGLTEHSCITLTYGDPANP-----------------------SAGSKKNSVGFILPNLEVKFI 374 (544)
Q Consensus 323 ~~~~~~-----~~i~~~yG~tE~~~~~~~~~~~~~~-----------------------~~~~~~~~~G~~~~~~~~~i~ 374 (544)
.+.++. ..+++.||+||++..++........ .......++|.++++++++|+
T Consensus 320 ~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~ 399 (579)
T PRK09192 320 AEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIR 399 (579)
T ss_pred HHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEE
Confidence 987731 3589999999998665543211000 000113578999999999999
Q ss_pred eCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHH
Q 039837 375 NPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAEL 454 (544)
Q Consensus 375 d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~i 454 (544)
| +++..++.|+.|||+++|+.++.|||++ ..+...+..++||+|||+|++ .+|+++++||.+|+||++|++|+|.+|
T Consensus 400 d-~~~~~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eI 476 (579)
T PRK09192 400 N-EAGMPLPERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDI 476 (579)
T ss_pred C-CCCCCCCCCCEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHH
Confidence 9 5788999999999999999999999999 666677778999999999999 999999999999999999999999999
Q ss_pred HHHHhcCCCcc--ceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhccc-CCCceeEEEEee--cCCCCCCccc
Q 039837 455 EAILLTHPSVE--DAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVA-TYKKVRVLHFVD--GIPKSHSGKI 529 (544)
Q Consensus 455 E~~l~~~~~v~--~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~-~~~~p~~~~~~~--~~P~t~~GKi 529 (544)
|++|++||+|. +++|++++++. ++.++++++..++...+.+++.+++++.+. .++.|..++++. +||+|.+||+
T Consensus 477 E~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~i~~~~~~~lP~t~~GKv 555 (579)
T PRK09192 477 EWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDEERRGQLIHALAALVRSEFGVEAAVELVPPHSLPRTSSGKL 555 (579)
T ss_pred HHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCChHHHHHHHHHHHHHHHHHhCCCceEEEeCCCCcCCCCCcch
Confidence 99999999998 89999988774 457888887766555567889999998874 688888777774 8999999999
Q ss_pred chHHHHHHHHH
Q 039837 530 MRRILKDKMLE 540 (544)
Q Consensus 530 ~r~~l~~~~~~ 540 (544)
+|++|++++.+
T Consensus 556 ~R~~l~~~~~~ 566 (579)
T PRK09192 556 SRAKAKKRYLS 566 (579)
T ss_pred hHHHHHHHHHc
Confidence 99999999865
No 109
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=7e-61 Score=469.64 Aligned_cols=502 Identities=26% Similarity=0.332 Sum_probs=394.1
Q ss_pred CCCCCCHHHHHHhhhhhcCCceEEEEcc------CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHH
Q 039837 32 VPENVTLPDFVLQDAELYADKVAFVEAV------SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVA 105 (544)
Q Consensus 32 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~------~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~ 105 (544)
.....|+++.+.+.+..+|+.+++-... .-..+||.|.++++..++..|++.|+++++.|+|+.-|+++|+++.
T Consensus 71 ~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~ 150 (691)
T KOG1256|consen 71 FDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISE 150 (691)
T ss_pred CCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhH
Confidence 3467899999999999999999986442 1267899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEec-cchHHHhhcC-------CCcEE-Eecccc------c----cc
Q 039837 106 LGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSY-APIYEKVKGL-------GLPII-VLGEER------I----ES 166 (544)
Q Consensus 106 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~-~~~~~~~~~~-------~~~~~-~~~~~~------~----~~ 166 (544)
+||...|.+.|||-..++++.++++++++++.+++++ ++....+.+. .++.+ .+++.. . ..
T Consensus 151 ~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~ 230 (691)
T KOG1256|consen 151 MACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVE 230 (691)
T ss_pred HHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeE
Confidence 9999999999999999999999999999999999999 4444444331 13333 333221 1 12
Q ss_pred ccCHHHHHHhhhhcC--------CCCCCCCCCCCCCCcCcceeeccHHHHHHHHHh---hccccC-CcccCccEEEEecc
Q 039837 167 AINWSELIEAADKAG--------NNFSNDDDVKQTDLWISKGVMLTHRNLVANLCS---TLFSVV-PEMIGQVTTLGLIP 234 (544)
Q Consensus 167 ~~~~~~~~~~~~~~~--------~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~---~~~~~~-~~~~~~~~~~~~~p 234 (544)
..+|+++.+.+.... +...+.+.|||||||.||||++||+|+.+.+.. ...... ......|++++.+|
T Consensus 231 v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLP 310 (691)
T KOG1256|consen 231 VYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLP 310 (691)
T ss_pred EEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCc
Confidence 567888877653222 122233578999999999999999999986543 222211 12234699999999
Q ss_pred hhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCC----------------------
Q 039837 235 FFHIYGITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDP---------------------- 292 (544)
Q Consensus 235 ~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---------------------- 292 (544)
+.|++..+.. ...+..|+++.+.. .|+..+.+.++..+||.+.++|..+.++.+..
T Consensus 311 LAHi~er~~~-~~~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k 388 (691)
T KOG1256|consen 311 LAHIFERVVE-LYTFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYK 388 (691)
T ss_pred HHHHHHHHHH-HhHhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 9999998544 44558899999877 57888888899999999999999887763200
Q ss_pred ----CCCccCc--cc---------------cccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCC
Q 039837 293 ----IVDEFDL--SK---------------LQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPA 351 (544)
Q Consensus 293 ----~~~~~~~--~~---------------l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~ 351 (544)
...+... .. =+.|.+++|++|+++++...++..+ ++.|+++||+||++..++...
T Consensus 389 ~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~~--- 464 (691)
T KOG1256|consen 389 LEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLTL--- 464 (691)
T ss_pred HHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEecc---
Confidence 0011111 00 0344599999999999999999998 899999999999985554443
Q ss_pred CCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCc
Q 039837 352 NPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGD 431 (544)
Q Consensus 352 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~ 431 (544)
+ .+...+++|.|+|+++++++|.++..-.+.|..|||+|+|+.++.|||++|+.|.+.++.+||++|||+|+|+++|.
T Consensus 465 -~-~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p~G~ 542 (691)
T KOG1256|consen 465 -P-GDNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDPNGT 542 (691)
T ss_pred -C-CCCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECCCcc
Confidence 2 33478999999999999999976777677777999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCceee-cceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCH-------H-------
Q 039837 432 IFIVDRIKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESE-------D------- 496 (544)
Q Consensus 432 ~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~-------~------- 496 (544)
+.+.||.+++||+ +|++|.|+.||++..+.+-|.+.+|.+.... ..++++|+++++...+. .
T Consensus 543 l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~---~~LvaiVvpd~e~~~~~a~~~~~~~~~eelc~ 619 (691)
T KOG1256|consen 543 LKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLR---SFLVAIVVPDPEVLKSWAAKDGVKGTFEELCR 619 (691)
T ss_pred EEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcch---hcEEEEEecChhhchhhHHHccCchhHHHHhc
Confidence 9999999999998 8999999999999999999999999875533 57899999866421110 1
Q ss_pred ----------HHHHHHH-hcccCCCceeEEEEe------ecCCCCCCcccchHHHHHHHHHhhhC
Q 039837 497 ----------DIMDFVA-SNVATYKKVRVLHFV------DGIPKSHSGKIMRRILKDKMLEKMRK 544 (544)
Q Consensus 497 ----------~l~~~l~-~~l~~~~~p~~~~~~------~~~P~t~~GKi~r~~l~~~~~~~~~~ 544 (544)
++.+.-+ +.+..+.....+... +.=-+||+-|++|..+.+.|++||++
T Consensus 620 n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~Id~ 684 (691)
T KOG1256|consen 620 NLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQIDE 684 (691)
T ss_pred ChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHHHH
Confidence 1111111 235566666666663 34456899999999999999999863
No 110
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=5e-60 Score=485.02 Aligned_cols=438 Identities=16% Similarity=0.177 Sum_probs=341.5
Q ss_pred cCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccch------HHHhhc----CCCcEEEecc-cc
Q 039837 95 LPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPI------YEKVKG----LGLPIIVLGE-ER 163 (544)
Q Consensus 95 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~------~~~~~~----~~~~~~~~~~-~~ 163 (544)
++|+++++++++||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+.. .....+++.. ..
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999997642 111111 1112222211 00
Q ss_pred ------cccccCHHHHHHhhh--------h-----cCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCccc
Q 039837 164 ------IESAINWSELIEAAD--------K-----AGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMI 224 (544)
Q Consensus 164 ------~~~~~~~~~~~~~~~--------~-----~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~ 224 (544)
......+..+..... . ........+.+||||||.||||++||+++..........+ ++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~--~~~ 158 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHM--DIQ 158 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhc--CCC
Confidence 011223444432100 0 0112334567999999999999999999877665544444 677
Q ss_pred CccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeeecchHHHHHHhcCCC--CCccCccc
Q 039837 225 GQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAPIVPPIILSLVKDPI--VDEFDLSK 301 (544)
Q Consensus 225 ~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~ 301 (544)
.+|++++.+|++|.+++ ..++.++..|+++++.+. +++..+++.|+++++|++.++|+++..|++... ....++++
T Consensus 159 ~~d~~l~~~pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~ 237 (499)
T PLN03051 159 PGDVVCWPTNLGWMMGP-WLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSK 237 (499)
T ss_pred CCCEEEEccCcceeeeh-HHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchh
Confidence 88999999999999987 567889999999998874 678899999999999999999999999987543 23456777
Q ss_pred cccccEEEecCCCCHhHHHHHHhhc-CCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCC
Q 039837 302 LQLRAVMTAAAPLAPDLLSSFEKKF-PGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGK 380 (544)
Q Consensus 302 l~~~~v~~~G~~~~~~~~~~~~~~~-~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~ 380 (544)
+|. +++||+++++++.+++.+.+ .++.+++.||+||++..+..... ......+++|+|.++++++|+| ++|+
T Consensus 238 Lr~--i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~----~~~~~~~~~G~p~~~~~~~ivd-~~g~ 310 (499)
T PLN03051 238 LRV--FASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTL----LQPQAPGAFSTASLGTRFVLLN-DNGV 310 (499)
T ss_pred heE--EEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccc----cCCCCCccccCCCCCceEEEEC-CCCC
Confidence 777 99999999999998777633 14789999999998754332211 0123457899999999999999 6889
Q ss_pred cCCCC--CCceEEEecccc--cccccCChhhhhcccCC--------CCeeecCceEEEcCCCcEEEEeecCCceeeccee
Q 039837 381 SLPSN--TPGELCVRSQCV--MQGYYNNEEETARTIDK--------NGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQ 448 (544)
Q Consensus 381 ~~~~g--~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~--------~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~ 448 (544)
+++.| +.|||+++||.+ +.|||+++ .+...+++ .+||+|||+|++|+||++++.||.||+||++|++
T Consensus 311 ~~~~g~~~~Gel~v~g~~~~~~~gy~~~~-~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~ 389 (499)
T PLN03051 311 PYPDDQPCVGEVALAPPMLGASDRLLNAD-HDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIK 389 (499)
T ss_pred CCCCCCCcceEEEEecCcCCCCccccCCc-ccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEE
Confidence 99988 589999999976 57999765 33333322 2278999999999999999999999999999999
Q ss_pred eChHHHHHHHhc-CCCccceEEEeecCCCCC-ceeEEEE---EeCCCC-CCCHHHHHHHH----HhcccCCCceeEEEEe
Q 039837 449 VAPAELEAILLT-HPSVEDAAVVSLPDEEAG-EIPAACV---VMNPNA-KESEDDIMDFV----ASNVATYKKVRVLHFV 518 (544)
Q Consensus 449 v~~~~iE~~l~~-~~~v~~~~v~~~~~~~~~-~~~~~~v---~~~~~~-~~~~~~l~~~l----~~~l~~~~~p~~~~~~ 518 (544)
|+|.|||++|.+ ||+|.+++|++++++..| +.+++++ +++++. ..+.+++++++ +++|+.++.|..++++
T Consensus 390 v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~i~~v 469 (499)
T PLN03051 390 TSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNPLFKVSRVKIV 469 (499)
T ss_pred CCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCCccCCceEEEc
Confidence 999999999986 999999999999998888 6788888 666654 35667777665 4557776667679999
Q ss_pred ecCCCCCCcccchHHHHHHHHHhhh
Q 039837 519 DGIPKSHSGKIMRRILKDKMLEKMR 543 (544)
Q Consensus 519 ~~~P~t~~GKi~r~~l~~~~~~~~~ 543 (544)
++||+|++||++|++|++.+.++++
T Consensus 470 ~~lP~t~~GKi~r~~L~~~~~~~~~ 494 (499)
T PLN03051 470 PELPRNASNKLLRRVLRDQLKKELS 494 (499)
T ss_pred CCCCCCCCccHHHHHHHHHHHHhhc
Confidence 9999999999999999998877654
No 111
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-59 Score=462.65 Aligned_cols=502 Identities=25% Similarity=0.345 Sum_probs=407.9
Q ss_pred CCCCCCCHHHHHHhhh--hhcCCceEEEEcc----CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHH
Q 039837 31 PVPENVTLPDFVLQDA--ELYADKVAFVEAV----SGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIV 104 (544)
Q Consensus 31 ~~~~~~~l~~~l~~~a--~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~ 104 (544)
......|....+..+. ...++++++++.. +...+||.|+.+.+.++|..|.+.|+++||+|++++|+.++++++
T Consensus 58 ~~g~~ln~~~n~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia 137 (626)
T KOG1175|consen 58 FPGAFLNACYNCLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIA 137 (626)
T ss_pred cccchhhhhHhhhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHH
Confidence 3344556666665443 2257888887542 224589999999999999999988999999999999999999999
Q ss_pred HHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEE-----------------Eecccccccc
Q 039837 105 ALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPII-----------------VLGEERIESA 167 (544)
Q Consensus 105 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~ 167 (544)
++||.++|++.+++...+++.++...+..++++++++.+.............. .+--......
T Consensus 138 ~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d 217 (626)
T KOG1175|consen 138 MLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRD 217 (626)
T ss_pred HHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEeccccc
Confidence 99999999999999999999999999999999999997765443332221000 0000111123
Q ss_pred cCHHHHHHhhhhc------CCCCCCCCCCCCCCCcCcceeeccHHHHHHHH-HhhccccCCcccCccEEEEecchhHHHH
Q 039837 168 INWSELIEAADKA------GNNFSNDDDVKQTDLWISKGVMLTHRNLVANL-CSTLFSVVPEMIGQVTTLGLIPFFHIYG 240 (544)
Q Consensus 168 ~~~~~~~~~~~~~------~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~g 240 (544)
..++......... ....+..+.+|||+||.||++.+|+...+-.. ......+ .+.++|++++.....++.|
T Consensus 218 ~~~~~~~~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~--d~q~~dv~~~~~d~GWi~g 295 (626)
T KOG1175|consen 218 LFWSLELKKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHF--DLQPSDVLWCASDLGWITG 295 (626)
T ss_pred ccHHHHhhhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceec--cCCCcceEEEecccCeeec
Confidence 3444443322111 12233457899999999999999887654444 4444444 8899999999999999999
Q ss_pred HHHHHHhhHhccceEEEcC--ccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCc--cCccccccccEEEecCCCCH
Q 039837 241 ITGICCATLRNKGKVVMMN--RFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDE--FDLSKLQLRAVMTAAAPLAP 316 (544)
Q Consensus 241 ~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--~~~~~l~~~~v~~~G~~~~~ 316 (544)
.++.++.+|..|+++++.+ ++++..+++.+.++++|++.+.|+.++.|.+...... ..++++|. +.++||++.+
T Consensus 296 ~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~--~~S~Gepi~~ 373 (626)
T KOG1175|consen 296 HSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRT--CGSVGEPINP 373 (626)
T ss_pred cchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEE--EeecCccCCc
Confidence 9888999999999999976 4589999999999999999999999998876555333 33345666 9999999999
Q ss_pred hHHHHHHhhcCCC-eEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCC-CCceEEEec
Q 039837 317 DLLSSFEKKFPGV-QVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSN-TPGELCVRS 394 (544)
Q Consensus 317 ~~~~~~~~~~~~~-~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g-~~Gel~v~~ 394 (544)
+.+..+.+.+ +. .|++.||+||+|+.++......+ ...+++.+.|.+|+.+.|.| ++|+.++.+ +.|+|+++.
T Consensus 374 ~~~ew~~~~~-~~~pv~e~~~qtEtG~~~i~~~~g~~---p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~~~G~l~~~~ 448 (626)
T KOG1175|consen 374 EAWEWWKRVT-GLDPIYETYGQTETGGICITPKPGKL---PIKPGSAGKPFPGYDVQILD-ENGNELPPSTGNGELRLKP 448 (626)
T ss_pred chHHHHHHhc-CccchhhceeeeccCceeeeccCCCC---CcCccccCCCCCCcceEEEC-CCCCCcCCCCceeEEEEeC
Confidence 9999999998 55 69999999999998887652111 57889999999999999999 588888876 889999997
Q ss_pred --c-cccccccCChhhhhcccCC--CCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEE
Q 039837 395 --Q-CVMQGYYNNEEETARTIDK--NGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAV 469 (544)
Q Consensus 395 --~-~~~~gy~~~~~~~~~~~~~--~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 469 (544)
| +.+++||+|++..+..+.. .|+|.|||.+++|+||++++.||.||+|+++|+++.+.|||+++.+||.|.|++|
T Consensus 449 ~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAv 528 (626)
T KOG1175|consen 449 PWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAV 528 (626)
T ss_pred CCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhheee
Confidence 3 7799999999955444334 7899999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCceeEEEEEeCCCCCCCH---HHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHHh
Q 039837 470 VSLPDEEAGEIPAACVVMNPNAKESE---DDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLEK 541 (544)
Q Consensus 470 ~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~~ 541 (544)
++.+++..|+.+++|+++.++....+ ++|++++++.+.++..|+.|++++.||+|.+||+-|+.||+....+
T Consensus 529 Vg~p~~~~ge~v~aFvvl~~g~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 529 VGSPDPIKGEVVLAFVVLKSGSHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGK 603 (626)
T ss_pred ecCCCCCCCeEEEEEEEEcCCCCChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhccC
Confidence 99999999999999999999854333 5677778888999999999999999999999999999999987543
No 112
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=3.7e-58 Score=465.36 Aligned_cols=429 Identities=24% Similarity=0.375 Sum_probs=360.7
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccc
Q 039837 65 TYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAP 144 (544)
Q Consensus 65 Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 144 (544)
||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+.+..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hHHHhhcCCCcEEEecccccccccCHHHHHHh-------hhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhcc
Q 039837 145 IYEKVKGLGLPIIVLGEERIESAINWSELIEA-------ADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLF 217 (544)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~ 217 (544)
..... .... .+...... .............+||||||.||+|.+||+++...+.....
T Consensus 81 ~~~~~----~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~ 145 (436)
T TIGR01923 81 LEEKD----FQAD-----------SLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKE 145 (436)
T ss_pred ccccc----eeec-----------chHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHh
Confidence 42110 0000 00000000 00111122335678999999999999999999998888877
Q ss_pred ccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCcc
Q 039837 218 SVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEF 297 (544)
Q Consensus 218 ~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 297 (544)
.+ +..++++++..+|++|.+++ ..++.++..|+++++.+.++ .+++.++++++|++.++|+++..|++.....
T Consensus 146 ~~--~~~~~d~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~~~--~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~-- 218 (436)
T TIGR01923 146 NL--GFTEDDNWLLSLPLYHISGL-SILFRWLIEGATLRIVDKFN--QLLEMIANERVTHISLVPTQLNRLLDEGGHN-- 218 (436)
T ss_pred hc--CCCCCceEEEccCcHhHHHH-HHHHHHHhcCceEEecchHH--HHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC--
Confidence 77 78889999999999999888 56789999999999987653 8999999999999999999999998865321
Q ss_pred CccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCC
Q 039837 298 DLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPE 377 (544)
Q Consensus 298 ~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~ 377 (544)
++++. ++++|+++++++.+.+.+. ++.+++.||+||++..++..... ......++|.|++++++++.+.+
T Consensus 219 --~~l~~--~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~----~~~~~~~~G~~~~~~~~~i~~~~ 288 (436)
T TIGR01923 219 --ENLRK--ILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPE----MLHARPDVGRPLAGREIKIKVDN 288 (436)
T ss_pred --CceEE--EEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCcc----ccccccCCCccCCCcEEEEEeCC
Confidence 45555 9999999999999988774 89999999999998765543311 11112248999999999994422
Q ss_pred CCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHH
Q 039837 378 TGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAI 457 (544)
Q Consensus 378 ~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~ 457 (544)
. ++.|||+++|+.++.||+++++.+...+ .++||+|||+++++.||.+++.||.+|++|++|.++++.+||++
T Consensus 289 ~------~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~ 361 (436)
T TIGR01923 289 K------EGHGEIMVKGANLMKGYLYQGELTPAFE-QQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEIETV 361 (436)
T ss_pred C------CCceEEEEECCccchhhCCChhhhhhhh-cCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHH
Confidence 2 2779999999999999999888776655 67999999999999999999999999999999999999999999
Q ss_pred HhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHH
Q 039837 458 LLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRIL 534 (544)
Q Consensus 458 l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l 534 (544)
|++++.|.++++++.++...+..+.+++++.+ ..+..++.+++++.++.+++|..++++++||+|++||++|++|
T Consensus 362 l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~~l~~~l~~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 362 LYQHPGIQEAVVVPKPDAEWGQVPVAYIVSES--DISQAKLIAYLTEKLAKYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred HHhCCCeeEEEEeCCcchhcCCeeEEEEEECC--CCCHHHHHHHHHHhhhCCCCCeEEEEecCCCCCCCCceecccC
Confidence 99999999999999887777778888888765 3677899999999999999999999999999999999999865
No 113
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8e-58 Score=458.26 Aligned_cols=406 Identities=18% Similarity=0.233 Sum_probs=350.2
Q ss_pred EEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhc
Q 039837 55 FVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAA 134 (544)
Q Consensus 55 ~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 134 (544)
+++. ++++||+||.++++++|+.|. .|+++|++|+++++|+++++++++|++++|++++|+++..+.+.+..+++++
T Consensus 2 ~~~~--~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~ 78 (414)
T PRK08308 2 LIVN--DEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRA 78 (414)
T ss_pred eEec--CceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhC
Confidence 4554 689999999999999999985 6899999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccchHHHhhcCCCcEEEecccccccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHh
Q 039837 135 DAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCS 214 (544)
Q Consensus 135 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~ 214 (544)
+++++++++.... .. . .............+||||||.||||.+||+++.+++..
T Consensus 79 ~~~~~i~~~~~~~-----------~~--~-------------~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~ 132 (414)
T PRK08308 79 GCHGLLYGESDFT-----------KL--E-------------AVNYLAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEA 132 (414)
T ss_pred CCCEEEecCcccc-----------cc--c-------------CCCCCCCCceEEEECCCCCCCCcEEEEehHhHHHHHHH
Confidence 9999998753210 00 0 00112223447889999999999999999999998887
Q ss_pred hccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCC
Q 039837 215 TLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIV 294 (544)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 294 (544)
....+ ....+++.+..+|++|.+|+...++.++..|+++++.+..++..+++.++++++|++.++|+++..|.+....
T Consensus 133 ~~~~~--~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~ 210 (414)
T PRK08308 133 YNEAL--NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGRLLPG 210 (414)
T ss_pred HHHhh--CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc
Confidence 77666 6678889999999999999888889999999999999888999999999999999999999999999875432
Q ss_pred CccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEE
Q 039837 295 DEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFI 374 (544)
Q Consensus 295 ~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~ 374 (544)
. .+++. ++.+|+++++++.++|.+. ..++++.||+||++.+.... .....+++|+|++++++++.
T Consensus 211 ~----~~l~~--~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~-------~~~~~~~~G~p~~~~~~~~~ 275 (414)
T PRK08308 211 T----FQFHA--VMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICP-------DMKSHLDLGNPLPHVSVSAG 275 (414)
T ss_pred c----ccccE--EEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecC-------CCCCCCccCccCCCeEEEEe
Confidence 1 23444 9999999999999999987 57899999999998544321 22345679999999999987
Q ss_pred eCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHH
Q 039837 375 NPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAEL 454 (544)
Q Consensus 375 d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~i 454 (544)
+. .++.|||++++ .++||+|||+|++++||++++.||.+|+||++|++|+|.+|
T Consensus 276 ~~-------~~~~gel~v~~-------------------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eI 329 (414)
T PRK08308 276 SD-------ENAPEEIVVKM-------------------GDKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEV 329 (414)
T ss_pred cC-------CCCCceEEEEc-------------------CCceEECCceEEECCCccEEEecccCCeEEECCEEECHHHH
Confidence 52 35679999974 35799999999999999999999999999999999999999
Q ss_pred HHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHH
Q 039837 455 EAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRIL 534 (544)
Q Consensus 455 E~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l 534 (544)
|++|.++|+|.+++|++.+++..++.++++++... ..+.+++.++++++|+.+++|..++++++||+|++||++|+.|
T Consensus 330 E~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~ 407 (414)
T PRK08308 330 EDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHE--EIDPVQLREWCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLL 407 (414)
T ss_pred HHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCC--CCCHHHHHHHHHHhCccccCCcEEEEeccCCCCCCcCeehhhh
Confidence 99999999999999999998888888888887654 5677899999999999999999999999999999999999954
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.6e-58 Score=478.01 Aligned_cols=486 Identities=22% Similarity=0.311 Sum_probs=377.7
Q ss_pred CHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeee
Q 039837 37 TLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFS 116 (544)
Q Consensus 37 ~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 116 (544)
++.+.|.+.|+..|+.+++.+.+.++.+||.||+++++++|.+|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 57888999999999999998776678899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHH-------HHHHHhcCceEEEeccchHHHhhcC---CCcEEEecccccccccCHHHHHHhh----hhcCC
Q 039837 117 GANPTAHASEL-------KKQVDAADAKLIVSYAPIYEKVKGL---GLPIIVLGEERIESAINWSELIEAA----DKAGN 182 (544)
Q Consensus 117 ~l~~~~~~~~l-------~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 182 (544)
++++..+.+++ ..+++.++++.+++++......... ....+.. +++.... .....
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~~~~~~~~~~~ 151 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEKGIRVLTV-----------ADLLAADPIDPVETGE 151 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcccCCceeeh-----------hhhcccCCCCcCCCCC
Confidence 99998775544 5567888999999987654433221 1122211 1111110 11122
Q ss_pred CCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCc-cEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-
Q 039837 183 NFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQ-VTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR- 260 (544)
Q Consensus 183 ~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~- 260 (544)
.....+.+||||||.||||++||+++...+......+ ++... +++++.+|++|.+++...++.++..|+++++..+
T Consensus 152 ~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~--~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~ 229 (545)
T PRK07768 152 DDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAA--EFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPM 229 (545)
T ss_pred CCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhc--CCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHH
Confidence 3334678999999999999999999998887766665 55655 8999999999999987778888999999988764
Q ss_pred ---cCHHHHHHHHHHcCceeeecchHHHHHHhcCC----CCCccCccccccccEEEecCCCCHhHHHHHHhh---c--CC
Q 039837 261 ---FELRAFLDALITHEVTFAPIVPPIILSLVKDP----IVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKK---F--PG 328 (544)
Q Consensus 261 ---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~---~--~~ 328 (544)
.++..+.+.+++++++++.+.|..+..+.+.. .....++++++. ++++|+++++++.+.+.+. + +.
T Consensus 230 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~--~~~~g~~~~~~~~~~~~~~~~~~g~~~ 307 (545)
T PRK07768 230 DFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRF--ALNGAEPIDPADVEDLLDAGARFGLRP 307 (545)
T ss_pred HHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheee--EEeccCCCCHHHHHHHHHHHHhcCCCc
Confidence 26778899999999999988777766655422 112355667676 9999999999999998874 4 22
Q ss_pred CeEEecccCccccccccccCCCCC---------------------CCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCC
Q 039837 329 VQVQEAYGLTEHSCITLTYGDPAN---------------------PSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTP 387 (544)
Q Consensus 329 ~~i~~~yG~tE~~~~~~~~~~~~~---------------------~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~ 387 (544)
..+++.||+||++..+........ .......+++|+|+++++++++| +++++++.|+.
T Consensus 308 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g~~ 386 (545)
T PRK07768 308 EAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPPRGV 386 (545)
T ss_pred ccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCCCCE
Confidence 359999999999875543221100 00122446899999999999999 67899999999
Q ss_pred ceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccce
Q 039837 388 GELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDA 467 (544)
Q Consensus 388 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~ 467 (544)
|||+++|+.++.||++.+.... .++.++||+|||+++++++|.++++||.+|+|+++|.++++.+||+.|+++|+|.++
T Consensus 387 Gel~v~~~~~~~gy~~~~~~~~-~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~ 465 (545)
T PRK07768 387 GVIELRGESVTPGYLTMDGFIP-AQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAARVEGVRPG 465 (545)
T ss_pred EEEEEccCcccccccCCCCCcc-cccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHHhCcccccc
Confidence 9999999999999998654433 334678999999999999999999999999999999999999999999999999998
Q ss_pred EEEeec--CCCCCceeEEEEEeCCCCC-CCHHHHHHHHHhcccCC--CceeEEEEee--cCCCCCCcccchHHHHHHHH
Q 039837 468 AVVSLP--DEEAGEIPAACVVMNPNAK-ESEDDIMDFVASNVATY--KKVRVLHFVD--GIPKSHSGKIMRRILKDKML 539 (544)
Q Consensus 468 ~v~~~~--~~~~~~~~~~~v~~~~~~~-~~~~~l~~~l~~~l~~~--~~p~~~~~~~--~~P~t~~GKi~r~~l~~~~~ 539 (544)
+|+++. +...++..++++....... ....++.+.+++.+... ..|..+.+++ +||+|++||++|+.|+++|.
T Consensus 466 ~vv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 466 NAVAVRLDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAHEVVAEVGVRPRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred eEEEEEecCCCCceEEEEEEEecccccHHHHHHHHHHHHHHHHHHhCCCccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 777654 3333444444444332211 12245667777766543 5788788876 89999999999999999874
No 115
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=5.4e-55 Score=410.64 Aligned_cols=489 Identities=21% Similarity=0.319 Sum_probs=402.7
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhc
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAG 112 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G 112 (544)
-...|+.+.+.++++++|+++|+++..+++.+||+|+.++++++|+.|...|++.||.|+++|+|.++++.++|+++++|
T Consensus 74 r~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlG 153 (649)
T KOG1179|consen 74 RERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLG 153 (649)
T ss_pred ccCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhC
Confidence 35679999999999999999999998667899999999999999999999999999999999999999999999999999
Q ss_pred CeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-------CcEEEecccccccccCHHHHHHhhhhcCC---
Q 039837 113 GVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-------LPIIVLGEERIESAINWSELIEAADKAGN--- 182 (544)
Q Consensus 113 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 182 (544)
++...||.+.-.+.+.+.++.++++++|++.+..+.+.+.. +.....+ ........+++....+....
T Consensus 154 v~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~--~~~~~~g~~~L~~~l~~~~~~~v 231 (649)
T KOG1179|consen 154 VITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLG--PTSVPDGIESLLAKLSAAPKHPV 231 (649)
T ss_pred ceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecC--CCCCCchHHHHHHhhcccccCCC
Confidence 99999999999999999999999999999999887776652 2222222 22223333344333221111
Q ss_pred ----------CCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhcc
Q 039837 183 ----------NFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNK 252 (544)
Q Consensus 183 ----------~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G 252 (544)
..+..-.+||||||.||+.++||......+......+ +++++|+++..+|++|..+.+..+..++..|
T Consensus 232 p~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~--g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~G 309 (649)
T KOG1179|consen 232 PVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVF--GMTADDVVYTTLPLYHSAAGILGIGGCLLHG 309 (649)
T ss_pred CcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHh--CCCccceEEEcchhHHHHHHHHHHHHHHhcC
Confidence 1112235799999999999999999988887677777 8999999999999999999999999999999
Q ss_pred ceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEE
Q 039837 253 GKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQ 332 (544)
Q Consensus 253 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~ 332 (544)
+++++-.+++...|++...++++|++.-.--+.+.|++.+......-..+|+ .-|..+.+++|+.|.++|...+|.
T Consensus 310 aT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRl----a~GNGLR~diW~~Fv~RFg~~~Ig 385 (649)
T KOG1179|consen 310 ATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRL----AYGNGLRPDIWQQFVKRFGIIKIG 385 (649)
T ss_pred ceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEE----EecCCCCchHHHHHHHHcCCCeEE
Confidence 9999999999999999999999999999999999999987655444334443 567789999999999999666699
Q ss_pred ecccCccccccccccCCCCCCCCCCCCCcccc------cCCCceEEEEeCCCCC----------cCCCCCCceEEEe--c
Q 039837 333 EAYGLTEHSCITLTYGDPANPSAGSKKNSVGF------ILPNLEVKFINPETGK----------SLPSNTPGELCVR--S 394 (544)
Q Consensus 333 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~------~~~~~~~~i~d~~~~~----------~~~~g~~Gel~v~--~ 394 (544)
+.||+||........ +...+.+|+ -+--+++-=+|+++|+ ++++||.|.++-+ .
T Consensus 386 E~YgaTEgn~~~~N~--------d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~ 457 (649)
T KOG1179|consen 386 EFYGATEGNSNLVNY--------DGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQ 457 (649)
T ss_pred EEeccccCcceeeee--------cCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEecc
Confidence 999999976544332 233344443 2222344445666665 4788999966433 2
Q ss_pred ccc---cccccCChhhhhccc------CCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCcc
Q 039837 395 QCV---MQGYYNNEEETARTI------DKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVE 465 (544)
Q Consensus 395 ~~~---~~gy~~~~~~~~~~~------~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~ 465 (544)
... +.||.+..+.|+++. .+|-||.|||+-.+|+.|++|+.+|.+|.++..|+||+..|+|.+|..+.++.
T Consensus 458 k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~~ 537 (649)
T KOG1179|consen 458 KNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFLQ 537 (649)
T ss_pred CCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHhhhcccc
Confidence 233 889999888887654 45679999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeecCCCC-CceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHH
Q 039837 466 DAAVVSLPDEEA-GEIPAACVVMNPNAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDK 537 (544)
Q Consensus 466 ~~~v~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~ 537 (544)
|+.|+++.-+.. |..-.|.++..|+.+.+.+.+-+++++.||+|.+|.++.++++|++|.+-|..+.+|+++
T Consensus 538 dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 538 DVNVYGVTVPGYEGRAGMAAIVLDPTTEKDLEKLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKTELQKE 610 (649)
T ss_pred ceeEEEEecCCccCccceEEEEecCcccchHHHHHHHHHhhCccccchHHHHHHhhhhcccchhhHHHHHHHc
Confidence 999999976654 334455566788888899999999999999999999999999999999999999998875
No 116
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=1.4e-56 Score=451.03 Aligned_cols=394 Identities=30% Similarity=0.490 Sum_probs=318.2
Q ss_pred HHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCC
Q 039837 42 VLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPT 121 (544)
Q Consensus 42 l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 121 (544)
|+++|+++||++|+++ ..++.+||+||+++++++|..|++.|+++||+|+++++|+++++++++||+++|++++|++|.
T Consensus 1 f~~~a~~~pd~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~ 79 (417)
T PF00501_consen 1 FERQAQRYPDRIALID-DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPS 79 (417)
T ss_dssp HHHHHHHSTTSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETT
T ss_pred ChhHHhhCCCceEEEE-CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccccccc
Confidence 5789999999999999 348999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCceEEEe----ccchHHHhhc----CCC--cEEEecccccccccCHHHHHHh--hhh--cCCCCCCC
Q 039837 122 AHASELKKQVDAADAKLIVS----YAPIYEKVKG----LGL--PIIVLGEERIESAINWSELIEA--ADK--AGNNFSND 187 (544)
Q Consensus 122 ~~~~~l~~~l~~~~~~~ii~----~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~ 187 (544)
++.+++.++++.++++++|+ +......+.. ... ..+.++................ ... ........
T Consensus 80 ~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (417)
T PF00501_consen 80 LSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASLSDEPQSPEDSPDDPAF 159 (417)
T ss_dssp SSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHHCHCSHSTTHTTTSEEE
T ss_pred cccccccccccccceeEEEEeccccccccccchhhhccccccccccccccccccccccccccccccccccCCCCccceeE
Confidence 99999999999999999997 2222221111 111 1333332221111111110000 000 02234446
Q ss_pred CCCCCCCCcCcceeeccHHHHHHHHHhhc--cccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccC---
Q 039837 188 DDVKQTDLWISKGVMLTHRNLVANLCSTL--FSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFE--- 262 (544)
Q Consensus 188 ~~~tsgttG~PKgV~~t~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~--- 262 (544)
..+||||||.||+|.+||+++++.+..+. ..+ ++. +++++.+|++|.+|+...++.++..|+++++++...
T Consensus 160 i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~--~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~ 235 (417)
T PF00501_consen 160 ILFTSGTTGKPKGVVLTHRNLLAQARALALPEYF--GLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFD 235 (417)
T ss_dssp EEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTT--TTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHH
T ss_pred eecccccccccccccccccccccccccccccccc--ccC--ceEEeeccccccccccccccccccccccccccccccccc
Confidence 78999999999999999999999987764 112 223 599999999999998789999999999999998654
Q ss_pred HHHHHHHHHHcCceeeecchHHHHHHhcCCCCC----ccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCc
Q 039837 263 LRAFLDALITHEVTFAPIVPPIILSLVKDPIVD----EFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLT 338 (544)
Q Consensus 263 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 338 (544)
+..+++.++++++|++.++|+++..|++..... ..+++++|. ++++|+++++++.+++++.++.+++++.||+|
T Consensus 236 ~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~--v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~t 313 (417)
T PF00501_consen 236 PESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRT--VISGGEPLPPDLLRRLRKAFGNAPIINLYGST 313 (417)
T ss_dssp HHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SE--EEEESST-CHHHHHHHHHHHTTSEEEEEEEEG
T ss_pred cccchhcccccccccccccccccccccccccccccccccccccccc--cccccccCChhhccccccccccccceeccccc
Confidence 467899999999999999999999999833222 346777777 99999999999999999999556999999999
Q ss_pred cccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCee
Q 039837 339 EHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWL 418 (544)
Q Consensus 339 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~ 418 (544)
|++.+++... ........+++|.|+++++++|+|+++++++++|+.|||+++|+.++.||+++|+.+...|..+|||
T Consensus 314 E~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~ 390 (417)
T PF00501_consen 314 ETGSIATIRP---PEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWY 390 (417)
T ss_dssp GGSSEEEEEE---TTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEE
T ss_pred ccceeeeccc---ccccccccccccccccccccccccccccccccccccccccccCCccceeeeccccccccccccccce
Confidence 9998887542 0112245678999999999999997779999999999999999999999999999999998666899
Q ss_pred ecCceEEEcCCCcEEEEeecCCceeec
Q 039837 419 HTGDIGYIDDDGDIFIVDRIKELIKYK 445 (544)
Q Consensus 419 ~TGD~~~~~~~g~~~~~GR~~d~i~~~ 445 (544)
+|||+|++|+||++++.||.||+||++
T Consensus 391 ~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 391 RTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred ecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 999999999999999999999999974
No 117
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-55 Score=411.97 Aligned_cols=505 Identities=23% Similarity=0.302 Sum_probs=395.4
Q ss_pred CCCCCCCCCHHHHHHhhhhhcCCceEEEEc----------cCC-----------ceeeHHHHHHHHHHHHHHHHHcCCCC
Q 039837 29 AVPVPENVTLPDFVLQDAELYADKVAFVEA----------VSG-----------KAYTYAQVARDTRGFAKALRSLGLRK 87 (544)
Q Consensus 29 ~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~----------~~~-----------~~~Ty~el~~~~~~la~~L~~~Gi~~ 87 (544)
..+.+.-.|+.+.+.+.++++.++.++-.. .+| ..+||.|+.+++.++|++|.+.|+++
T Consensus 34 ~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~ 113 (678)
T KOG1180|consen 34 SPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKP 113 (678)
T ss_pred CCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCC
Confidence 344556679999999999999999987321 112 46799999999999999999999998
Q ss_pred CCE-EEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCC-----CcE-EEec
Q 039837 88 GQV-VIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLG-----LPI-IVLG 160 (544)
Q Consensus 88 gd~-V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~~~-~~~~ 160 (544)
++. ++|+++.+.+|+.+++||++-+...|.+-..+..+.+.+-++.++++.+||+.+.++.+.... ++. +..+
T Consensus 114 ~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~II~~d 193 (678)
T KOG1180|consen 114 KETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTVKHIIYFD 193 (678)
T ss_pred CCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCceeEEEEec
Confidence 776 999999999999999999999999999999999999999999999999999999888664431 232 2333
Q ss_pred c---c-----------ccccccCHHHHHHhhhhc-------CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhcccc
Q 039837 161 E---E-----------RIESAINWSELIEAADKA-------GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSV 219 (544)
Q Consensus 161 ~---~-----------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~ 219 (544)
+ . ......+++++....... .+...+.+.+|||+||.||||+++|+|+.+.+.......
T Consensus 194 ~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v 273 (678)
T KOG1180|consen 194 PIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENV 273 (678)
T ss_pred CCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccC
Confidence 1 1 112234566666544332 122233467899999999999999999999998887766
Q ss_pred CCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHHH--------HHHHHcCceeeecchHHHHHHhcC
Q 039837 220 VPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAFL--------DALITHEVTFAPIVPPIILSLVKD 291 (544)
Q Consensus 220 ~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~--------~~i~~~~~t~~~~~P~~~~~l~~~ 291 (544)
. .+.+.|+++..+|+.|++.+. +=+.++.-|+.+-..++.+...-. ..+...+||++.++|..+.+..+.
T Consensus 274 ~-~lg~~D~yi~yLPLAHIlEl~-aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKg 351 (678)
T KOG1180|consen 274 P-ELGPKDRYIAYLPLAHILELT-AELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKG 351 (678)
T ss_pred c-ccCCCceEEEechHHHHHHHH-HHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHH
Confidence 5 789999999999999999994 456788899888876643322222 223456899999999887665321
Q ss_pred C--------------------------CCCcc---Ccc-----------ccccccEEEecCCCCHhHHHHHHhhcCCCeE
Q 039837 292 P--------------------------IVDEF---DLS-----------KLQLRAVMTAAAPLAPDLLSSFEKKFPGVQV 331 (544)
Q Consensus 292 ~--------------------------~~~~~---~~~-----------~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i 331 (544)
. +.... .+. .=++|.+++||++++++..+.+.-.+ .+++
T Consensus 352 Vl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~-C~Pv 430 (678)
T KOG1180|consen 352 VLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICF-CCPV 430 (678)
T ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-cccc
Confidence 0 00000 000 11356699999999999988888877 7799
Q ss_pred EecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCC--CceEEEecccccccccCChhhhh
Q 039837 332 QEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNT--PGELCVRSQCVMQGYYNNEEETA 409 (544)
Q Consensus 332 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~--~Gel~v~~~~~~~gy~~~~~~~~ 409 (544)
..+||.||++...+... ..+...+.+|.|++.++++++|-+++.=.+.+. .||||++|+++..|||++|+.|.
T Consensus 431 ~qGYGLTEtca~~tv~e-----~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~ 505 (678)
T KOG1180|consen 431 LQGYGLTETCAAATVLE-----PEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTK 505 (678)
T ss_pred cccccccchhcccEecC-----hhhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChhhhh
Confidence 99999999987776652 367778899999999999999965554444443 79999999999999999999999
Q ss_pred cccCC-CC--eeecCceEEEcCCCcEEEEeecCCceee-cceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEE
Q 039837 410 RTIDK-NG--WLHTGDIGYIDDDGDIFIVDRIKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACV 485 (544)
Q Consensus 410 ~~~~~-~~--~~~TGD~~~~~~~g~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v 485 (544)
+.|.. +| ||+|||+|++.+||+|.+.+|++|.+|+ +|+.|+++.+|.+++..|.|.+.+|++.... ..++++|
T Consensus 506 e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~---s~~VaiV 582 (678)
T KOG1180|consen 506 EDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNK---SKPVAIV 582 (678)
T ss_pred hhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEeccccc---ceeEEEE
Confidence 99977 78 9999999999999999999999999998 9999999999999999999999999976544 6889999
Q ss_pred EeCCCC--------CCCH-----------------HHHHHHH-HhcccCCCceeEEEEeec------CCCCCCcccchHH
Q 039837 486 VMNPNA--------KESE-----------------DDIMDFV-ASNVATYKKVRVLHFVDG------IPKSHSGKIMRRI 533 (544)
Q Consensus 486 ~~~~~~--------~~~~-----------------~~l~~~l-~~~l~~~~~p~~~~~~~~------~P~t~~GKi~r~~ 533 (544)
++.+.. .... ++|.+.- .+.|..+.+|..|++.++ =-.|..-|+.|+.
T Consensus 583 VPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPenGlvT~A~KLKRk~ 662 (678)
T KOG1180|consen 583 VPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPENGLVTAALKLKRKE 662 (678)
T ss_pred cCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCCccccHHHHHhhHHH
Confidence 987541 1111 1222222 345889999999988743 1234557999999
Q ss_pred HHHHHHHhhhC
Q 039837 534 LKDKMLEKMRK 544 (544)
Q Consensus 534 l~~~~~~~~~~ 544 (544)
++..|+++|++
T Consensus 663 I~~~~k~ei~~ 673 (678)
T KOG1180|consen 663 ILAAYKKEIDR 673 (678)
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2e-52 Score=419.87 Aligned_cols=395 Identities=24% Similarity=0.328 Sum_probs=327.3
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEecc
Q 039837 65 TYAQVARDTRGFAKALRS-LGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYA 143 (544)
Q Consensus 65 Ty~el~~~~~~la~~L~~-~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 143 (544)
||.||.++++++|++|.+ .|+++||+|+++++|+.+++++++||+++|++++|+++.++.+.+.++++++++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred chHHHhhcCCCcEEEecccccccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcc
Q 039837 144 PIYEKVKGLGLPIIVLGEERIESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEM 223 (544)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~ 223 (544)
+....+........................................+||||||.||+|.+||+++..........+ ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~~~--~~ 158 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPLELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLARRY--GL 158 (408)
T ss_pred chhhhccccCCceEEechhhhhhcccccccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHHhc--CC
Confidence 8777665544333332211000000000000000001122334668899999999999999999999888887766 77
Q ss_pred cCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccC---HHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCcc
Q 039837 224 IGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFE---LRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLS 300 (544)
Q Consensus 224 ~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 300 (544)
..+++++...|++|.+++ ..++.++..|+++++.+... +..+.+.++++++|.+.++|.++..|++... ..++
T Consensus 159 ~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~---~~~~ 234 (408)
T TIGR01733 159 DPDDRVLQFASLSFDASV-EEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP---PALA 234 (408)
T ss_pred CCCceEEEecCCccchhH-HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh---hccc
Confidence 788999999999999887 67899999999999887543 6889999999999999999999999998654 4566
Q ss_pred ccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCC-CCCcccccCCCceEEEEeCCCC
Q 039837 301 KLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGS-KKNSVGFILPNLEVKFINPETG 379 (544)
Q Consensus 301 ~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~~~~~i~d~~~~ 379 (544)
+++. ++++|+++++++++.|.+.++++.+++.||+||++.++......... ... ...++|.|++++.++|+|+ ++
T Consensus 235 ~l~~--v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~~~-~~ 310 (408)
T TIGR01733 235 SLRL--VILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADD-APRESPVPIGRPLANTRLYVLDD-DL 310 (408)
T ss_pred CceE--EEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccc-cCCccccccCcccCCceEEEECC-CC
Confidence 7777 99999999999999999999669999999999999777533211111 111 3678999999999999995 48
Q ss_pred CcCCCCCCceEEEecccccccccCChhhhhcccCCC------C--eeecCceEEEcCCCcEEEEeecCCceeecceeeCh
Q 039837 380 KSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKN------G--WLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAP 451 (544)
Q Consensus 380 ~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~------~--~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~ 451 (544)
+.++.|+.|||+++|+.++.||+++++.+...|... + ||+|||+++++++|++++.||.+|+++++|++++|
T Consensus 311 ~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~ 390 (408)
T TIGR01733 311 RPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIEL 390 (408)
T ss_pred CCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEech
Confidence 999999999999999999999999999888776332 2 99999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCccceEE
Q 039837 452 AELEAILLTHPSVEDAAV 469 (544)
Q Consensus 452 ~~iE~~l~~~~~v~~~~v 469 (544)
.+||+++.+++.|.+++|
T Consensus 391 ~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 391 GEIEAALLRHPGVREAVV 408 (408)
T ss_pred HHHHHHHhcCcchhhhcC
Confidence 999999999999998765
No 119
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.6e-46 Score=367.64 Aligned_cols=317 Identities=26% Similarity=0.387 Sum_probs=272.7
Q ss_pred CCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEc---Cc
Q 039837 184 FSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMM---NR 260 (544)
Q Consensus 184 ~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~---~~ 260 (544)
......+||||||.||||++||+++.+........+ ...+.++..+|++|.+|+ ..++.++..|+++++. ..
T Consensus 36 d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~----~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~v~~~~~~~ 110 (358)
T PRK07824 36 DVALVVATSGTTGTPKGAMLTAAALTASADATHDRL----GGPGQWLLALPAHHIAGL-QVLVRSVIAGSEPVELDVSAG 110 (358)
T ss_pred CeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc----CCCCeEEEECChHHHHHH-HHHHHHHHcCCeEEecCcCCC
Confidence 345778999999999999999999988877655443 345678899999999998 4567788888888873 35
Q ss_pred cCHHHHHHHHHHcC--ceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCc
Q 039837 261 FELRAFLDALITHE--VTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLT 338 (544)
Q Consensus 261 ~~~~~~~~~i~~~~--~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 338 (544)
+++..+++.+++++ .++...+|..+..++..... ...+++++. +++||+++++++.+++.+. ++++++.||+|
T Consensus 111 ~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~-~~~~~~l~~--i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~T 185 (358)
T PRK07824 111 FDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA-TAALAELDA--VLVGGGPAPAPVLDAAAAA--GINVVRTYGMS 185 (358)
T ss_pred cCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-cCCcccceE--EEECCCCCCHHHHHHHHhc--CCcEEecccCC
Confidence 78999999999998 56677789888877765432 234566666 9999999999999998864 89999999999
Q ss_pred cccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCee
Q 039837 339 EHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWL 418 (544)
Q Consensus 339 E~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~ 418 (544)
|++..+. ..|.|++++++++.| |||+++|+.++.||+++++.+ .+..++||
T Consensus 186 E~~~~~~---------------~~G~~~~g~~v~i~~------------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~ 236 (358)
T PRK07824 186 ETSGGCV---------------YDGVPLDGVRVRVED------------GRIALGGPTLAKGYRNPVDPD--PFAEPGWF 236 (358)
T ss_pred ccCCCcC---------------cCceeCCCCEEEecC------------CEEEEecCccccccCCCcccc--cccCCCce
Confidence 9875331 258899999999954 999999999999999988754 34467899
Q ss_pred ecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHH
Q 039837 419 HTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDI 498 (544)
Q Consensus 419 ~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 498 (544)
+|||+|++ .+|.+++.||.+|+||++|++|+|.+||++|.++|+|.+++|++.+++..|+.++++++...+...+.+++
T Consensus 237 ~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~i 315 (358)
T PRK07824 237 RTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAPTLEAL 315 (358)
T ss_pred ecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCCcCHHHH
Confidence 99999999 89999999999999999999999999999999999999999999998888899999998777667788999
Q ss_pred HHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 499 MDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 499 ~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
++++++.|+.+++|..++++++||+|.+||++|++|+++|.+
T Consensus 316 ~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 316 RAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred HHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 999999999999999999999999999999999999999865
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=2.8e-44 Score=391.54 Aligned_cols=464 Identities=14% Similarity=0.088 Sum_probs=338.1
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEc-cCC--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHH
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEA-VSG--KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIM 109 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~-~~~--~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~ 109 (544)
+...|+.++|.+.++++|+++|+... ..+ +++||+|+.++++++|.+|.+.|+++||+|+|+++|+++|+++.+||+
T Consensus 424 ~~~~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~ 503 (1452)
T PTZ00297 424 AGVRSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACA 503 (1452)
T ss_pred ccCCCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 34469999999999999999998642 112 679999999999999999999999999999999999999999999999
Q ss_pred HhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcC---CCc-EEEeccc---cc--------ccccCHHHHH
Q 039837 110 AAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGL---GLP-IIVLGEE---RI--------ESAINWSELI 174 (544)
Q Consensus 110 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~-~~~~~~~---~~--------~~~~~~~~~~ 174 (544)
++|++.||+.+ +.+++.+++++++++++|++.+....+.+. .++ +++++.. .. .....|+++.
T Consensus 504 ~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll 581 (1452)
T PTZ00297 504 LYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVE 581 (1452)
T ss_pred HcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHH
Confidence 99999999975 467999999999999999998877766443 233 3344321 00 0134577776
Q ss_pred Hhhhh--c------CCCCCCCCC---CCCCCCcCcceeeccHHHHHHHHHhhcccc-CCcccCccEEEEecchhHHHHHH
Q 039837 175 EAADK--A------GNNFSNDDD---VKQTDLWISKGVMLTHRNLVANLCSTLFSV-VPEMIGQVTTLGLIPFFHIYGIT 242 (544)
Q Consensus 175 ~~~~~--~------~~~~~~~~~---~tsgttG~PKgV~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~g~~ 242 (544)
..... . .......+. +||||||.||||++||+|++.++....... ......++++++++|++|+++.
T Consensus 582 ~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er- 660 (1452)
T PTZ00297 582 QKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNR- 660 (1452)
T ss_pred hcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHH-
Confidence 64321 0 011111123 499999999999999999999988765422 1134578999999999999996
Q ss_pred HHHHhhHhccceEEEcCccCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCC-------------------------cc
Q 039837 243 GICCATLRNKGKVVMMNRFELRAFLDALITHEVTFAPIVPPIILSLVKDPIVD-------------------------EF 297 (544)
Q Consensus 243 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-------------------------~~ 297 (544)
...+.++..|+++.. +++..+++.|++++||+++++|+++..+.+....+ ..
T Consensus 661 ~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~ 737 (1452)
T PTZ00297 661 VFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHR 737 (1452)
T ss_pred HHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCC
Confidence 456778899999874 36889999999999999999999988764321000 00
Q ss_pred Cc---------cc------cccccEEEecC--CCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCC
Q 039837 298 DL---------SK------LQLRAVMTAAA--PLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKN 360 (544)
Q Consensus 298 ~~---------~~------l~~~~v~~~G~--~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~ 360 (544)
.. +. =++|.+++||. +++..+. . ++++..+||+||+.. ... . ....
T Consensus 738 ~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~-----~--~i~i~~g~glTE~~~---~~~----~-~~~~-- 800 (1452)
T PTZ00297 738 RDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL-----E--HISVCYVPCLREVFF---LPS----E-GVFC-- 800 (1452)
T ss_pred CCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh-----C--CceEEEecceEEeee---ecC----C-CCcc--
Confidence 00 00 02444777763 4443332 2 577888999999531 111 1 1222
Q ss_pred cccccCCCceEEEEeC-CCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecC
Q 039837 361 SVGFILPNLEVKFINP-ETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIK 439 (544)
Q Consensus 361 ~~G~~~~~~~~~i~d~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~ 439 (544)
..|.|+|+++++|.+. +.+. .+..|||+++ |+++|+.|.+.+ ++|+ +||.|++.||++
T Consensus 801 ~~G~PlpgvEvKI~~~~E~~~---~~~~GEIlvr-------~~kdpe~T~e~~--~gW~---------~dG~L~IidRkK 859 (1452)
T PTZ00297 801 VDGTPAPSLQVDLEPFDEPSD---GAGIGQLVLA-------KKGEPRRTLPIA--AQWK---------RDRTLRLLGPPL 859 (1452)
T ss_pred cCCeecCceEEEEcccccccC---CCCCCeEEEE-------ECCChHHHHHhh--CcCc---------cCCeEEEEeccc
Confidence 2399999999999873 3222 1346999995 458899888743 4554 699999999999
Q ss_pred Cceee-cceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCC-------------------CCHHHH-
Q 039837 440 ELIKY-KGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAK-------------------ESEDDI- 498 (544)
Q Consensus 440 d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-------------------~~~~~l- 498 (544)
|+||. +|++|.|..||+.+.++|.|.+++|++.+.+ .++|+|++....- .+..++
T Consensus 860 dlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k----~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~~el~ 935 (1452)
T PTZ00297 860 GILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSR----PIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGWTELV 935 (1452)
T ss_pred cceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCC----ceEEEEEeCHHHHHHHHHHHcCCCccccccccCCHHHHH
Confidence 99998 8999999999999999999999999987654 3788888763210 022222
Q ss_pred -------HHHH---H--hcccCCCceeEEEEe-ecC-----CCCCCcccchHHHHHHHHHhhhC
Q 039837 499 -------MDFV---A--SNVATYKKVRVLHFV-DGI-----PKSHSGKIMRRILKDKMLEKMRK 544 (544)
Q Consensus 499 -------~~~l---~--~~l~~~~~p~~~~~~-~~~-----P~t~~GKi~r~~l~~~~~~~~~~ 544 (544)
.+.+ . +.+..+.++..++++ ++| -+|++.|++|+.+.+.|+++|++
T Consensus 936 ~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~Ie~ 999 (1452)
T PTZ00297 936 AYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSVIER 999 (1452)
T ss_pred HhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHHHHHH
Confidence 2222 1 125567788776665 334 57999999999999999999863
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.9e-42 Score=361.39 Aligned_cols=443 Identities=21% Similarity=0.262 Sum_probs=354.8
Q ss_pred CCCCcceeeccccccCCcceeeecCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHH
Q 039837 2 AMPNSFSVPVPLAAAHDEEHIFRSRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALR 81 (544)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~ 81 (544)
.+|...+..+++..++++ ..+.....+.+...++.+.+.+.+...|++.|+.+. +..+||+++..+++++|..|.
T Consensus 196 ~~~~~~~~~l~ll~~~e~---~~~~~~~~~~~~~~~i~~~f~~~a~~~p~~~a~~~~--~~~lty~el~~~a~~la~~l~ 270 (642)
T COG1020 196 DAPRTSLSALPLLLPSER---EVWNALAAPIPLRLTIHLLFEEQAATTPDAVALVRG--GQQLTYAELDARANRLARLLI 270 (642)
T ss_pred hCcccCcccCCCCCHHHH---hhccccccCCCccchHHHHHHHHHHhCCCceeEecC--CCcccHHHHHHHHHHHHHHHH
Confidence 355666777788877777 112244555555689999999999999999999987 789999999999999999999
Q ss_pred HcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecc
Q 039837 82 SLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGE 161 (544)
Q Consensus 82 ~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 161 (544)
+.|++++++|+++.+.+.++++.++|++++|+.++|+++.++.+++..+++.++++.+++............. +.++.
T Consensus 271 ~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 348 (642)
T COG1020 271 SLGVGPGETVAILADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG--LALDD 348 (642)
T ss_pred HcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc--ccccc
Confidence 9999999999999999999999999999999999999999999999999999999999998443222111111 11111
Q ss_pred cccccccCHHHHHHhhhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHH
Q 039837 162 ERIESAINWSELIEAADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGI 241 (544)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 241 (544)
.... ....... .........++..+|||+||.||||..+|+++.+...+....+ .....+.++...++.+..+.
T Consensus 349 ~~~~-~~~~~~~---~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~--~~~~~d~~l~~~s~~fD~~~ 422 (642)
T COG1020 349 ALSE-IPDTDPI---PQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARF--GLDADDRVLALASLSFDASV 422 (642)
T ss_pred cccc-CCccCcc---cccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhc--CCCcccEEeecCCcccchhH
Confidence 1100 0000000 0111223344778999999999999999999999888777776 78888999999998777665
Q ss_pred HHHHHhhHhccceEEEcCc---cCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhH
Q 039837 242 TGICCATLRNKGKVVMMNR---FELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDL 318 (544)
Q Consensus 242 ~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~ 318 (544)
..++.++..|+++++.+. .++..+.+.+.++++|++..+|.++..++..............+|.+++||+.++.++
T Consensus 423 -~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~ 501 (642)
T COG1020 423 -FEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLAL 501 (642)
T ss_pred -HHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHH
Confidence 788999999999999874 5788999999999999999999999999876322221112212344999999999999
Q ss_pred HHHHHhhcC-CCeEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccc
Q 039837 319 LSSFEKKFP-GVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCV 397 (544)
Q Consensus 319 ~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~ 397 (544)
..++....+ ...+.|.||+||+............. .. ..++|+|+++..++|.| +.+++++.|..||+++.|.++
T Consensus 502 ~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~--~~-~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~ 577 (642)
T COG1020 502 VQRLLQLAALARRLLNLYGPTEATLDAPSFPISAEL--ES-RVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGL 577 (642)
T ss_pred HHHHHHhccccceEeeccCccHHhhheeeEEccccc--CC-CCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcch
Confidence 999988764 57899999999965544433221111 11 56899999999999999 789999999999999999999
Q ss_pred cccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCC
Q 039837 398 MQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHP 462 (544)
Q Consensus 398 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 462 (544)
.+||+++|+.|...|..+.+|+|||++++..+|.+.++||.|+++|++|.++.+.+||..+.++|
T Consensus 578 a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 578 ALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred hhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 99999999999999855458999999999999999999999999999999999999999998875
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=3.3e-38 Score=307.63 Aligned_cols=288 Identities=19% Similarity=0.189 Sum_probs=230.3
Q ss_pred CCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHH
Q 039837 185 SNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELR 264 (544)
Q Consensus 185 ~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~ 264 (544)
.....+||||||.||||++||+++.+.+......+.......+++++.+|++|.+|+...++.++..|+++++...+++.
T Consensus 97 ~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~~~ 176 (386)
T TIGR02372 97 ARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAPAS 176 (386)
T ss_pred ceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCChH
Confidence 44678899999999999999999998887776665222234468999999999999877788899999999998888888
Q ss_pred HHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccc
Q 039837 265 AFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCIT 344 (544)
Q Consensus 265 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~ 344 (544)
.+++.++.+ |++.++|+++..|.+.. ..+++++ +++||+++++++++.+.+.. ...+++.||+||++++.
T Consensus 177 ~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr---~i~gGa~l~~~l~~~~~~~g-~~~v~~~YG~TEt~~i~ 246 (386)
T TIGR02372 177 GIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVV---GVSSGAPSTAATWRCLLAAG-LARLLEVYGATETGGIG 246 (386)
T ss_pred HHHHhhccC--CEEEECcHHHHHHHhhC----cCCCcce---eEecCCCCCHHHHHHHHHhc-ccchhheeccccccccc
Confidence 888877643 88999999999997643 2345544 36789999999999998852 34699999999998755
Q ss_pred cccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceE
Q 039837 345 LTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIG 424 (544)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~ 424 (544)
+... ....|.++|++++.+ + ++. + .| ...|++|||++
T Consensus 247 ~~~~----------~~~~~~~~p~~~~~~-~--~~~--------~---~g-------------------~~~~~~tgD~g 283 (386)
T TIGR02372 247 LREA----------PDDPFRLLPDLACFA-D--TLS--------S---AG-------------------LARRLDLQDRL 283 (386)
T ss_pred cccC----------CCCCcccCCCccccC-C--Ccc--------C---CC-------------------ccceeecCceE
Confidence 4321 123467777776543 1 111 0 01 12368999999
Q ss_pred EEcCCCcEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCC--HHHHHHHH
Q 039837 425 YIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKES--EDDIMDFV 502 (544)
Q Consensus 425 ~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~l 502 (544)
+++++|++++.||.||+||++|++|+|.+||++|.++|+|.+++|.. .++.+.+++++.++...+ .+++.+++
T Consensus 284 ~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~~~~~~~l~~~~ 358 (386)
T TIGR02372 284 AWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADEAELEIELRATA 358 (386)
T ss_pred EEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998863 356788998887643332 46888999
Q ss_pred HhcccCCCceeEEEEeecCCCCCCcccc
Q 039837 503 ASNVATYKKVRVLHFVDGIPKSHSGKIM 530 (544)
Q Consensus 503 ~~~l~~~~~p~~~~~~~~~P~t~~GKi~ 530 (544)
+++++.+++|..+.++++||+|++||++
T Consensus 359 ~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 359 ARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 9999999999999999999999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=5.2e-36 Score=300.27 Aligned_cols=317 Identities=17% Similarity=0.189 Sum_probs=231.7
Q ss_pred CCCCCCCCcCcceeeccHHHHHHHHHhhcccc-CCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHH
Q 039837 188 DDVKQTDLWISKGVMLTHRNLVANLCSTLFSV-VPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAF 266 (544)
Q Consensus 188 ~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~ 266 (544)
..+||||||.||++.+||.++..........+ ..+...+|+++...++....+.....+.++..|++++..+..++..+
T Consensus 80 ~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 159 (422)
T TIGR02155 80 IHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQTEKQ 159 (422)
T ss_pred EEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCCHHHH
Confidence 45899999999999999999876543322211 11667788888776654433433445667888999988877778999
Q ss_pred HHHHHHcCceeeecchHHHHHHhcCCCCCccCc--cccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccc
Q 039837 267 LDALITHEVTFAPIVPPIILSLVKDPIVDEFDL--SKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCIT 344 (544)
Q Consensus 267 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~--~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~ 344 (544)
++.|+++++|++.++|+++..|++.......+. .+++. ++++||++++++.+.+.+.| ++++++.||+||+++..
T Consensus 160 ~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~--i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~tE~~~~~ 236 (422)
T TIGR02155 160 VQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQV--GIFGAEPWTNAMRKEIEARL-GMKATDIYGLSEVIGPG 236 (422)
T ss_pred HHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEE--EEEeCCcCCHHHHHHHHHHh-CCceEecccchhhcCCc
Confidence 999999999999999999999886543332222 34455 99999999999999999999 89999999999985321
Q ss_pred cccCCCCCCCCCCCCCcccccC--CCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCc
Q 039837 345 LTYGDPANPSAGSKKNSVGFIL--PNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGD 422 (544)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD 422 (544)
....+. . ...|.++ +++.++|+|++++.++++|+.|||++++.. ...+ +.+||+|||
T Consensus 237 ~~~~~~-----~---~~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~~------------~~~~-p~~ry~TGD 295 (422)
T TIGR02155 237 VAMECV-----E---TQDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTLT------------KEAL-PVIRYRTRD 295 (422)
T ss_pred eeeccc-----c---cCCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecCC------------cccc-ceeeEEcCc
Confidence 111110 0 0122233 457778999778999999999999999732 2233 567999999
Q ss_pred eEEEcCC-C-----cEEEEeecCCceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCC-C-
Q 039837 423 IGYIDDD-G-----DIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKE-S- 494 (544)
Q Consensus 423 ~~~~~~~-g-----~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-~- 494 (544)
+++++++ | .+++.||.+|+|+++|.+|+|.+||.+|.++|+|...+.+........+.+.+.++..++... .
T Consensus 296 l~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~ 375 (422)
T TIGR02155 296 LTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKPESYTLRL 375 (422)
T ss_pred EEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecCcccccc
Confidence 9999775 4 468999999999999999999999999999999985444455444444567776666543211 1
Q ss_pred -------HHHHHHHHHhcccCCCceeEEEEe--ecCCCCCCcccchH
Q 039837 495 -------EDDIMDFVASNVATYKKVRVLHFV--DGIPKSHSGKIMRR 532 (544)
Q Consensus 495 -------~~~l~~~l~~~l~~~~~p~~~~~~--~~~P~t~~GKi~r~ 532 (544)
.++|.+.+++.+..+. .+.++ ++||+|. ||++|.
T Consensus 376 ~~~~~~~~~~i~~~~~~~~~~~~---~v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 376 HEQASLLAGEIQHTIKQEVGVSM---DVHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred hHHHHHHHHHHHHHHHhccCcEE---EEEEECCCCccCCC-CCceEE
Confidence 3556677777665553 24444 6999988 999874
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=100.00 E-value=9.8e-33 Score=276.87 Aligned_cols=496 Identities=17% Similarity=0.213 Sum_probs=347.6
Q ss_pred CCHHHHHHhhhhhcCCceEEEEc----cCCceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCccHHHHHHHHHH
Q 039837 36 VTLPDFVLQDAELYADKVAFVEA----VSGKAYTYAQVARDTRGFAKALRSL-GLRKGQVVIVVLPNVAEYGIVALGIMA 110 (544)
Q Consensus 36 ~~l~~~l~~~a~~~p~~~a~~~~----~~~~~~Ty~el~~~~~~la~~L~~~-Gi~~gd~V~i~~~n~~~~~~~~lA~~~ 110 (544)
.++.+.|++.++.+|+++|+..- ....++||++|.+++.+++.+|+.. -+++||.|++++++++|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 68999999999999999999753 2237899999999999999999976 589999999999999999999999999
Q ss_pred hcCeeecCCCCC------CHHHHHHHHHhcCceEEEeccchHHHhhcCC---------CcEEEecccccccccCHHHHHH
Q 039837 111 AGGVFSGANPTA------HASELKKQVDAADAKLIVSYAPIYEKVKGLG---------LPIIVLGEERIESAINWSELIE 175 (544)
Q Consensus 111 ~G~~~v~l~~~~------~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 175 (544)
+|.+++|+.|.. +-..+..+++.+++.+|+++......+.... .+.+...++....+.....-..
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~~k~~~~~~ 929 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPETIRKRKKNIK 929 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchhhhhhhhhhh
Confidence 999999999853 3446888999999999999988766554322 1111111111111000000000
Q ss_pred hhhhc------CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhH
Q 039837 176 AADKA------GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATL 249 (544)
Q Consensus 176 ~~~~~------~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l 249 (544)
..... .....+...+.-.+.|.--++.+||+++++.+....... .+.+..-++...+.+...|+...++..+
T Consensus 930 k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~--~l~~~rpl~~~~~~~sGlgf~~wcLlgV 1007 (1363)
T KOG3628|consen 930 KLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETC--QLYKSRPLLGCSSPYSGLGFNHWCLLGV 1007 (1363)
T ss_pred ccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHH--ccccCCceEEEecCccchhHHHHHHHHH
Confidence 00000 001111222333344777899999999999999988888 8888888999999999999999999999
Q ss_pred hccceEEEcCc----cCHHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccc----cccEEEecCCCCHhHHHH
Q 039837 250 RNKGKVVMMNR----FELRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQ----LRAVMTAAAPLAPDLLSS 321 (544)
Q Consensus 250 ~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~----~~~v~~~G~~~~~~~~~~ 321 (544)
++|...++.++ .++..|++.++++++.-++.+-..+..+.+.......+++... ..+++..-++....+...
T Consensus 1008 ysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~ali~s 1087 (1363)
T KOG3628|consen 1008 YSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIALIAS 1087 (1363)
T ss_pred HcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHHHHHH
Confidence 99999888775 3688899999999998888888877777654332222222111 022666677777788888
Q ss_pred HHhhcCC-----CeEEecccCccccccccccCCCCCC-----------------C-----CCCCCCcccccCCCceEEEE
Q 039837 322 FEKKFPG-----VQVQEAYGLTEHSCITLTYGDPANP-----------------S-----AGSKKNSVGFILPNLEVKFI 374 (544)
Q Consensus 322 ~~~~~~~-----~~i~~~yG~tE~~~~~~~~~~~~~~-----------------~-----~~~~~~~~G~~~~~~~~~i~ 374 (544)
+.+.|.. -.+.-.|+..=--.++....-...+ . ........|...+++++.|+
T Consensus 1088 f~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~Iv 1167 (1363)
T KOG3628|consen 1088 FKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIV 1167 (1363)
T ss_pred HHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEe
Confidence 8887621 1122233332221111110000000 0 01111134788899999999
Q ss_pred eCCCCCcCCCCCCceEEEecccccccccCChhhh-hccc---------CCCCeeecCceEEEcC------CC----cEEE
Q 039837 375 NPETGKSLPSNTPGELCVRSQCVMQGYYNNEEET-ARTI---------DKNGWLHTGDIGYIDD------DG----DIFI 434 (544)
Q Consensus 375 d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~-~~~~---------~~~~~~~TGD~~~~~~------~g----~~~~ 434 (544)
+||+..++.+|+.||||+.|.+-+.+|+...+.. ...| ...+|-||||+|++.. +| -+|+
T Consensus 1168 nPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyV 1247 (1363)
T KOG3628|consen 1168 NPETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYV 1247 (1363)
T ss_pred CCccccccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEE
Confidence 9999999999999999999999888877532111 1111 3557999999999842 22 3999
Q ss_pred EeecCCceeecceeeChHHHHHHHh-cCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHH-HhcccCCCce
Q 039837 435 VDRIKELIKYKGFQVAPAELEAILL-THPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFV-ASNVATYKKV 512 (544)
Q Consensus 435 ~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l-~~~l~~~~~p 512 (544)
+|-.++.+.++|.+.+|.+||..+. .||.|..|+||... ..++.++++.. +....+|.-.+ ...|..+.+.
T Consensus 1248 lG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~-----glvVvviE~~g--q~~~~~LvPlIv~~vL~eH~iI 1320 (1363)
T KOG3628|consen 1248 LGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQAT-----GLVVVVIECHG--QQELADLVPLIVNVVLEEHYII 1320 (1363)
T ss_pred eecccceeeecCcccCcchHHHHHHHhcccccceeeEeeC-----CeEEEEEEecC--chhHhhhhHHHHHHHHhhcceE
Confidence 9999999999999999999999884 58999999999543 35666666554 22333343333 3446665555
Q ss_pred -eEEEEe--ecCCCCCCcccchHHHHHHHHH
Q 039837 513 -RVLHFV--DGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 513 -~~~~~~--~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
..+.++ ..+|+++.|..+|..+++.|..
T Consensus 1321 ~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~ 1351 (1363)
T KOG3628|consen 1321 LDVVAFVDKGVFPRNSRGEKQRAHILDSWLA 1351 (1363)
T ss_pred EEEEEEecCCccccCCchhhHHHHHHHHHHh
Confidence 455555 5699999999999999998754
No 125
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-32 Score=284.11 Aligned_cols=516 Identities=18% Similarity=0.163 Sum_probs=333.2
Q ss_pred eccccccCCcceeeecCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEcc----CC--ceeeHHHHHHHHHHHHHHHHHc
Q 039837 10 PVPLAAAHDEEHIFRSRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAV----SG--KAYTYAQVARDTRGFAKALRSL 83 (544)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~----~~--~~~Ty~el~~~~~~la~~L~~~ 83 (544)
.+++.+......+.+...........-++...+.+.+...|...+..+.. .+ ..+||.+....++.+++.|...
T Consensus 10 ~~~~~~~~~~d~~~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~ 89 (1032)
T KOG1178|consen 10 SLSLITYRQEDSLPDETKQIGFEQFMGTLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSL 89 (1032)
T ss_pred cceeeccccccccCChhhhhhhhhhhcchhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhc
Confidence 33333333333444444433334444577788889999999888875421 11 5799999999999999999999
Q ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCC----HHHHHHHHHhcC-ceEEEeccchHHHhhcCC-CcEE
Q 039837 84 GLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAH----ASELKKQVDAAD-AKLIVSYAPIYEKVKGLG-LPII 157 (544)
Q Consensus 84 Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~----~~~l~~~l~~~~-~~~ii~~~~~~~~~~~~~-~~~~ 157 (544)
|..+|+.|++++..+.++++..++++++|..+++++|+++ ++.+..+..... ...-+......-.+.... .+..
T Consensus 90 ~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~ 169 (1032)
T KOG1178|consen 90 GSLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKL 169 (1032)
T ss_pred ccccCceEEEeccCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHHhhcccccc
Confidence 9999999999999999999999999999999999999999 332222211111 101111111111110000 0000
Q ss_pred EecccccccccCHHHHHHhhhhc-----CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEe
Q 039837 158 VLGEERIESAINWSELIEAADKA-----GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGL 232 (544)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 232 (544)
.++.. ...+..+....... .....+...+|||++|.||+|..+|..+.+...|....+ ....++.+-..
T Consensus 170 sv~~~----~~~f~~~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f--~~t~s~~~~~~ 243 (1032)
T KOG1178|consen 170 SVETI----ADSFQMVLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTF--PPTGSDRFTFK 243 (1032)
T ss_pred chhhc----cchhhhhhccCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccC--CcCccchhhhh
Confidence 00000 00111111110000 111122456899999999999999999999999999887 56666654111
Q ss_pred cchhHHHHHHHHHHhhHhccceEEEcCcc---CHHHHHHHHHHcCceeeecchHHHHHHhcCCCCC----------c---
Q 039837 233 IPFFHIYGITGICCATLRNKGKVVMMNRF---ELRAFLDALITHEVTFAPIVPPIILSLVKDPIVD----------E--- 296 (544)
Q Consensus 233 ~p~~~~~g~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----------~--- 296 (544)
...+........+...+..|..+..+... .+.++.+.++++.++..+.+|++.+.++...... .
T Consensus 244 ~~~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~ 323 (1032)
T KOG1178|consen 244 TSVYFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLL 323 (1032)
T ss_pred heeecccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhccccc
Confidence 12212112213344455556656555432 3789999999999999999999988876644321 0
Q ss_pred cCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccccCCCCCCCCCCCCCcccccCC-------Cc
Q 039837 297 FDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILP-------NL 369 (544)
Q Consensus 297 ~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~-------~~ 369 (544)
...+.+++ ...+|++....+...+...+...-...-|++++..+........... .......++.+.. ..
T Consensus 324 ~~~~~Lkl--~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~-~ll~~~~v~~~p~~~~~~~~~~ 400 (1032)
T KOG1178|consen 324 TKRSCLKL--VVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSK-VLLTNENVYSVPKFDSIIGSLT 400 (1032)
T ss_pred ccchhhee--eeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCccc-ceecceeEEeccchhhccCCCc
Confidence 11224556 99999999999998777766333334448888876655443211111 0000001111111 11
Q ss_pred eEEEEeCCCCCcCCCCCCceE----EEecccccccccCChhhhhccc-----CCCCeeecCceEEEcCCCcEEEEeecCC
Q 039837 370 EVKFINPETGKSLPSNTPGEL----CVRSQCVMQGYYNNEEETARTI-----DKNGWLHTGDIGYIDDDGDIFIVDRIKE 440 (544)
Q Consensus 370 ~~~i~d~~~~~~~~~g~~Gel----~v~~~~~~~gy~~~~~~~~~~~-----~~~~~~~TGD~~~~~~~g~~~~~GR~~d 440 (544)
...+.. ..+.+.+.++.+.. +-.+.....| +..++.....+ ..+.+|+|||+|+..++|.+.+.||.|+
T Consensus 401 ~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~ 478 (1032)
T KOG1178|consen 401 VLESLY-RAGGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADR 478 (1032)
T ss_pred ceeeee-ccCcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccc
Confidence 222222 22333332222222 2222333444 33344332222 2345799999999989999999999999
Q ss_pred ceeecceeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCC-CHHHHHHHHHhcccCCCceeEEEEee
Q 039837 441 LIKYKGFQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKE-SEDDIMDFVASNVATYKKVRVLHFVD 519 (544)
Q Consensus 441 ~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~l~~~l~~~~~p~~~~~~~ 519 (544)
+||++|.++...+|+.++..+|.|.++++....+...++.+.+|+++...... ...++++++++.|+.|++|..++.++
T Consensus 479 qIK~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~~~~~i~~~l~~~La~y~vPs~~V~l~ 558 (1032)
T KOG1178|consen 479 QIKDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKSVLIRDIRNYLKKELASYMLPSLVVPLA 558 (1032)
T ss_pred eEEEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCchhHHHHHHhhcccccceecceEEEEhh
Confidence 99999999999999999999999999999999888888999999987655433 34779999999999999999999999
Q ss_pred cCCCCCCcccchHHHHH
Q 039837 520 GIPKSHSGKIMRRILKD 536 (544)
Q Consensus 520 ~~P~t~~GKi~r~~l~~ 536 (544)
++|+|++||||+++|..
T Consensus 559 ~vPl~~~GKvDkkaL~~ 575 (1032)
T KOG1178|consen 559 KVPLNPNGKVDKKALLE 575 (1032)
T ss_pred hCCcCCCCCcChhhhhh
Confidence 99999999999999998
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=7.6e-29 Score=248.33 Aligned_cols=320 Identities=13% Similarity=0.066 Sum_probs=216.4
Q ss_pred CCCCCCCCcCcceeeccHHHHHHHHHhhcccc-CCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHH
Q 039837 188 DDVKQTDLWISKGVMLTHRNLVANLCSTLFSV-VPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAF 266 (544)
Q Consensus 188 ~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~ 266 (544)
..+||||||.||+|.+||.++..........+ ..++.++|+++...++.+..+.....+.++..|++++.... ....
T Consensus 91 i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~--~~~~ 168 (445)
T TIGR03335 91 IHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK--CTFP 168 (445)
T ss_pred EEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc--hhHH
Confidence 45699999999999999999877654443322 12677889999988887766654555667888888765443 3456
Q ss_pred HHHHHHcCceeeecchHHHHHHhcCCCCCccC--ccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccc
Q 039837 267 LDALITHEVTFAPIVPPIILSLVKDPIVDEFD--LSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCIT 344 (544)
Q Consensus 267 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~--~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~ 344 (544)
++.|+++++|.+.++|+.+..|.+.....+.+ ..+++. +++|||++++++.+.+.+.| ++++++.||+||++. +
T Consensus 169 ~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~--ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~TE~~~-~ 244 (445)
T TIGR03335 169 IRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRR--LVVGGESFADESRNYVEELW-GCEVYNTYGSTEGTM-C 244 (445)
T ss_pred HHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceE--EEEcCCCCCHHHHHHHHHHh-CCcEEecCChhhhhh-e
Confidence 88999999999999999988877643322222 234445 99999999999999999988 899999999999863 2
Q ss_pred cccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceE
Q 039837 345 LTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIG 424 (544)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~ 424 (544)
..+. .......+.+.+.++|+|++++.++++|+.|||++++-.... ++..+ +--.|+|||++
T Consensus 245 ~~c~---------~~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~--------~r~~~-PliRYrtgD~~ 306 (445)
T TIGR03335 245 GECQ---------AVAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPG--------ERCGS-LLINYDTEDTT 306 (445)
T ss_pred EEec---------CCCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCCC--------ccCCc-eEEEeecCceE
Confidence 2111 011122334568899999888889999999999999643100 00000 22359999999
Q ss_pred EEcC-C----Cc----EEEEeecCCceeecceeeChHHHHHHHhcC---CCcc-ceEEEeecCCCCCceeEEEEEeCCCC
Q 039837 425 YIDD-D----GD----IFIVDRIKELIKYKGFQVAPAELEAILLTH---PSVE-DAAVVSLPDEEAGEIPAACVVMNPNA 491 (544)
Q Consensus 425 ~~~~-~----g~----~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~---~~v~-~~~v~~~~~~~~~~~~~~~v~~~~~~ 491 (544)
++.. + |+ +...||.||+++++|.+++|.+||++|.++ +++. +..++........+.+.+.++..+..
T Consensus 307 ~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~e~~~~~ 386 (445)
T TIGR03335 307 VVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEGEITLRVSLECEDKD 386 (445)
T ss_pred EEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCCCceEEEEEEecCcc
Confidence 9732 2 21 445699999999999999999999999994 5554 34444333222223455555555543
Q ss_pred CCCHHHHHHHHHhc----cc-------CCCceeEEEEe--ecCCCCC-Ccccch
Q 039837 492 KESEDDIMDFVASN----VA-------TYKKVRVLHFV--DGIPKSH-SGKIMR 531 (544)
Q Consensus 492 ~~~~~~l~~~l~~~----l~-------~~~~p~~~~~~--~~~P~t~-~GKi~r 531 (544)
..+.+++.+.+.+. ++ ...+...+.++ ..+|++. .||..|
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 387 NCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 33344444444443 22 22222334444 6799983 588776
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=1.8e-27 Score=225.11 Aligned_cols=320 Identities=19% Similarity=0.225 Sum_probs=235.5
Q ss_pred CCCCCCCCcCcceeeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCccCHHHH
Q 039837 188 DDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRFELRAF 266 (544)
Q Consensus 188 ~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~ 266 (544)
+-.||||||.|+-+.+|+..+......+...+.. +...+|++..+.-+....|-......+-..|++++...+.+....
T Consensus 95 ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~~~~~ 174 (438)
T COG1541 95 IHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGNTERQ 174 (438)
T ss_pred EEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCccHHHH
Confidence 4569999999999999999988777666655543 667778776654432222222445666668888888777788999
Q ss_pred HHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccccccc
Q 039837 267 LDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSCITLT 346 (544)
Q Consensus 267 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~ 346 (544)
+++++++++|++.++|+++..|.+.....+.+...++++.+++|+|++++++.+.+.+.| |+..++.||+||..+....
T Consensus 175 ~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYGltE~~g~g~~ 253 (438)
T COG1541 175 LELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYGLTEGFGPGAG 253 (438)
T ss_pred HHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeeccccccccCCccc
Confidence 999999999999999999999998777665444445566699999999999999999999 9999999999999766422
Q ss_pred cCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEE
Q 039837 347 YGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYI 426 (544)
Q Consensus 347 ~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~ 426 (544)
++..........+...++|+||++|+.+++|+.|||+++.-. +..+ +--.|+|||++.+
T Consensus 254 --------eC~~~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~------------~~~~-PlIRYrtgDit~i 312 (438)
T COG1541 254 --------ECTERNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITTLT------------KEGM-PLIRYRTGDITVI 312 (438)
T ss_pred --------ccccccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEecc------------ccCc-ceEEEEcCCeeEe
Confidence 122222344556788899999999999999999999998522 1111 3336999999999
Q ss_pred cCC----Cc-----EEEEeecCCceeecceeeChHHHHHHHhcCCCcc-ceEEEeecCCCCCceeEEEEEeCCCCCCCHH
Q 039837 427 DDD----GD-----IFIVDRIKELIKYKGFQVAPAELEAILLTHPSVE-DAAVVSLPDEEAGEIPAACVVMNPNAKESED 496 (544)
Q Consensus 427 ~~~----g~-----~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~ 496 (544)
.++ |+ ..+.||+||++++.|.+|+|.+||++|.+.+.+. +..++... ++..+.+.+-+++.++......
T Consensus 313 ~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~L~V~vE~~~~~~~~~~ 391 (438)
T COG1541 313 LSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDELTVRVELENEAEELED 391 (438)
T ss_pred cccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCceEEEEEEecCcccchHH
Confidence 764 32 5689999999999999999999999999999999 66666655 5555677777777664222222
Q ss_pred --HHHHHHHhccc-CCCcee--EEEEeecCCCCCCcccch
Q 039837 497 --DIMDFVASNVA-TYKKVR--VLHFVDGIPKSHSGKIMR 531 (544)
Q Consensus 497 --~l~~~l~~~l~-~~~~p~--~~~~~~~~P~t~~GKi~r 531 (544)
.+.+.+.+.+. ...... .++...++|++.. |..|
T Consensus 392 ~~~~~~~l~~~~~~~~~~~~~v~~v~~g~l~r~~~-K~kr 430 (438)
T COG1541 392 ERRLAKKLIKNIKSELGVRVEVELVEPGELPRTEG-KAKR 430 (438)
T ss_pred HHHHHHHHHHHHHhhcCCceEEEEEeccceecccC-ceeE
Confidence 22234433322 222222 3444478999984 6544
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.91 E-value=4.4e-23 Score=186.32 Aligned_cols=205 Identities=15% Similarity=0.070 Sum_probs=156.3
Q ss_pred HHhhhhhcCCceEEEEc-c---CCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeee
Q 039837 42 VLQDAELYADKVAFVEA-V---SGKAYTYAQVARDTRGFAKALRS-LGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFS 116 (544)
Q Consensus 42 l~~~a~~~p~~~a~~~~-~---~~~~~Ty~el~~~~~~la~~L~~-~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 116 (544)
|...++.+|+++|++.. + ++.++||+||.++++++|++|++ .|+++||+|+++++|+++++++++||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 46778889999999743 1 23479999999999999999998 7999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEec-----c----cccccccCHHHHHHhhhh-------c
Q 039837 117 GANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLG-----E----ERIESAINWSELIEAADK-------A 180 (544)
Q Consensus 117 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~-------~ 180 (544)
|++ .+++++++++++....+... ...+.+. . ........+......... .
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAAGS-GEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGDQFAPYEPP 147 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhcccC-CceEEEeccccccCCCCCCCCcccchhhhhhccCCCCCCCCCC
Confidence 995 77899999988877765422 2233221 0 011122344443332111 1
Q ss_pred CCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc
Q 039837 181 GNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR 260 (544)
Q Consensus 181 ~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 260 (544)
.........||||+ +|.++.... ... ++.++|+++ .+|++|.+|+...++.++..|+++++.++
T Consensus 148 ~~~D~a~l~yTsg~---------~~~~~~~~~----~~~--~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~r 211 (227)
T TIGR03089 148 DATAPALVAGGGEW---------TGAELVAAA----RAA--GLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVTH 211 (227)
T ss_pred CCCcceeeeccccc---------cHHHHHHHH----hhc--CCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEecC
Confidence 11233456777643 666665554 223 678899999 99999999998889999999999999999
Q ss_pred cCHHHHHHHHHHcCce
Q 039837 261 FELRAFLDALITHEVT 276 (544)
Q Consensus 261 ~~~~~~~~~i~~~~~t 276 (544)
+++..+++.|+++|+|
T Consensus 212 Fd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 212 PDPARLDQIAETERVT 227 (227)
T ss_pred CCHHHHHHHHHhhcCC
Confidence 9999999999999986
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.88 E-value=3.8e-21 Score=194.28 Aligned_cols=501 Identities=15% Similarity=0.168 Sum_probs=331.3
Q ss_pred CcceeeecCCCCCCCCCCCCHHHHHHhhhhhcCCceEEEEccC-C--ceeeHHHHHHHHHHHHH-HHHHcCCCCCCEEEE
Q 039837 18 DEEHIFRSRHPAVPVPENVTLPDFVLQDAELYADKVAFVEAVS-G--KAYTYAQVARDTRGFAK-ALRSLGLRKGQVVIV 93 (544)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~-~--~~~Ty~el~~~~~~la~-~L~~~Gi~~gd~V~i 93 (544)
.+.++.++..+.........+..+++..-..++..+|.++.+. | ..+||..+..++.+.|+ .|.+.|+.++|+|.+
T Consensus 76 ~~~~~~~~~ntsss~~a~~d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL 155 (1363)
T KOG3628|consen 76 ARFPINDPRNTSSSMMALTDIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVL 155 (1363)
T ss_pred cccccCCCCCCchhhhhhcchHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEE
Confidence 3333333333333444555667777777778888888775321 2 57999999999999999 666779999999999
Q ss_pred EcCCC--ccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHhhcCCCcEEEecccccccccCHH
Q 039837 94 VLPNV--AEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKVKGLGLPIIVLGEERIESAINWS 171 (544)
Q Consensus 94 ~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (544)
+...+ +++++..++|...|.+.+|+.+..+.+++..+++....+++++............ ...++.
T Consensus 156 ~Y~~~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~------------~~~s~~ 223 (1363)
T KOG3628|consen 156 YYRKCEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDN------------SPVSLA 223 (1363)
T ss_pred EEEhhhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhcc------------CcccHH
Confidence 98866 7999999999999999999999999999999999999999999877665544321 011111
Q ss_pred HHHHh---------------hhhcCCCCCCCCCCCCCCCcCcceeeccHHHHHHHHHhhcccc-----------------
Q 039837 172 ELIEA---------------ADKAGNNFSNDDDVKQTDLWISKGVMLTHRNLVANLCSTLFSV----------------- 219 (544)
Q Consensus 172 ~~~~~---------------~~~~~~~~~~~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~----------------- 219 (544)
+.+.. ..+.....-..+.++.+.+|.--|++.+|+ ++.+.+.+....
T Consensus 224 k~v~~w~t~~~k~~~~~~k~~~P~~~~~~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~ 302 (1363)
T KOG3628|consen 224 KAVAWWKTNDFKGNYTKDKIKKPRMQLPYGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHA 302 (1363)
T ss_pred HHHHhhhcccccceeehhhccCCceeeeeEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhh
Confidence 11110 000001112345667778888888888887 544432221111
Q ss_pred -CCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc---cCHHHHHHHHHHcCceeeecchHHHHHHhcC----
Q 039837 220 -VPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR---FELRAFLDALITHEVTFAPIVPPIILSLVKD---- 291 (544)
Q Consensus 220 -~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~---- 291 (544)
.......+.++.........|+++.++.++++|.+.+.+++ ..|..+.+.+.++|++++..-...+......
T Consensus 303 ~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~ 382 (1363)
T KOG3628|consen 303 HVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQED 382 (1363)
T ss_pred hccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCC
Confidence 01345566777777778888999999999999999999886 6788899999999999998765555443221
Q ss_pred C-------CCCccCccccccccEEEecCCCCHhHHHHHHhhc----C-----------------CCeEEecccCcccccc
Q 039837 292 P-------IVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKF----P-----------------GVQVQEAYGLTEHSCI 343 (544)
Q Consensus 292 ~-------~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~----~-----------------~~~i~~~yG~tE~~~~ 343 (544)
+ +....++++++. +++....++.+...-....| . |...+..=+++|.+..
T Consensus 383 p~a~~s~~k~~t~d~sslk~--C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~ 460 (1363)
T KOG3628|consen 383 PKATLSFKKYKTPDLSSLKG--CMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTV 460 (1363)
T ss_pred cccccchhhccCCCccceee--eEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcc
Confidence 1 112346778777 88888888877655444332 0 1112222334555544
Q ss_pred ccccCCC-----CC--------------------CCCCCCCCcccccCCC-ceEEEEeCCCCCcCCCCCCceEEEecccc
Q 039837 344 TLTYGDP-----AN--------------------PSAGSKKNSVGFILPN-LEVKFINPETGKSLPSNTPGELCVRSQCV 397 (544)
Q Consensus 344 ~~~~~~~-----~~--------------------~~~~~~~~~~G~~~~~-~~~~i~d~~~~~~~~~g~~Gel~v~~~~~ 397 (544)
....+.. .+ .-.......+|...+| +.+.++++++...|.++++|||||.++++
T Consensus 461 ~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~ 540 (1363)
T KOG3628|consen 461 SIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSL 540 (1363)
T ss_pred cccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCc
Confidence 3322210 00 0011122234554444 56777888889999999999999999999
Q ss_pred cccccCChhhhhccc------------CCCCeeecCceEEEcCCCcEEEEeecCCcee-ecceeeChHH----------H
Q 039837 398 MQGYYNNEEETARTI------------DKNGWLHTGDIGYIDDDGDIFIVDRIKELIK-YKGFQVAPAE----------L 454 (544)
Q Consensus 398 ~~gy~~~~~~~~~~~------------~~~~~~~TGD~~~~~~~g~~~~~GR~~d~i~-~~G~~v~~~~----------i 454 (544)
..+||.-+..|...| ....|.|||-+|++ .+|.++++|-.+|++. +.|...+..+ |
T Consensus 541 ~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv-~~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~i 619 (1363)
T KOG3628|consen 541 GKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFV-HNGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELI 619 (1363)
T ss_pred ccceeeccccccceEEeeeccccCCCCccchhhhhcceeee-eCCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHH
Confidence 999999888887766 12247899999999 5666777777777665 4777665544 4
Q ss_pred HHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCC-CHHHHHHHHHhcccCCCcee----EEEEeecCCCCCCccc
Q 039837 455 EAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKE-SEDDIMDFVASNVATYKKVR----VLHFVDGIPKSHSGKI 529 (544)
Q Consensus 455 E~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~l~~~l~~~~~p~----~~~~~~~~P~t~~GKi 529 (544)
+.+.+..+.|-++.+|- .+..+.+++..|.... +.-+....+.+.+-..+... .++.-+.+|+|+.|.|
T Consensus 620 ktV~R~v~~VF~~saf~------~E~~~Vv~~esP~a~e~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi 693 (1363)
T KOG3628|consen 620 KTVMRGVIAVFDVSAFE------DEHIVVVVLESPDATEENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGI 693 (1363)
T ss_pred HHHHhccceEEEEeeee------cceEEEEEEeCcchhhhhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCcccccc
Confidence 45556678888888884 3455555554444311 11222223333333222222 2344489999999999
Q ss_pred chHHHHHHHHH
Q 039837 530 MRRILKDKMLE 540 (544)
Q Consensus 530 ~r~~l~~~~~~ 540 (544)
.-.+.++.|.+
T Consensus 694 ~~~~~k~~F~~ 704 (1363)
T KOG3628|consen 694 HNNECKQAFLE 704 (1363)
T ss_pred ccHHHHHHHHc
Confidence 99999999975
No 130
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=1.2e-21 Score=186.89 Aligned_cols=118 Identities=24% Similarity=0.258 Sum_probs=110.0
Q ss_pred CCCeeecCceEEE-cCCCcEEEEeecCCceeecc---eeeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCC
Q 039837 414 KNGWLHTGDIGYI-DDDGDIFIVDRIKELIKYKG---FQVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNP 489 (544)
Q Consensus 414 ~~~~~~TGD~~~~-~~~g~~~~~GR~~d~i~~~G---~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 489 (544)
.+|||+|||+|++ |++|++++.||.+ +| ++|+|. ||++|.+||+|.+++|++++++..|+.++|++++..
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~ 280 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL 280 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC
Confidence 6899999999998 7999999999998 78 799999 999999999999999999999999999999998763
Q ss_pred CCCCCHHHHHHHHHhcccCCCceeEEEEeecCCCCCCcccchHHHHHHHHH
Q 039837 490 NAKESEDDIMDFVASNVATYKKVRVLHFVDGIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 490 ~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~~P~t~~GKi~r~~l~~~~~~ 540 (544)
..+.++++++++++|+. ++|..++++++||+|++||++|++|++.+.+
T Consensus 281 --~~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~ 328 (365)
T PRK09188 281 --PADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMN 328 (365)
T ss_pred --CCCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhc
Confidence 45778999999999999 9999999999999999999999999997644
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.69 E-value=4.3e-15 Score=145.50 Aligned_cols=240 Identities=13% Similarity=0.149 Sum_probs=152.0
Q ss_pred CCCCCCCCcCcceeeccHHHHHHHHHhhcc-ccCCcccCccEEEEe--cchhHHHHHHHHHHhhHhcc-ceEEEcC-ccC
Q 039837 188 DDVKQTDLWISKGVMLTHRNLVANLCSTLF-SVVPEMIGQVTTLGL--IPFFHIYGITGICCATLRNK-GKVVMMN-RFE 262 (544)
Q Consensus 188 ~~~tsgttG~PKgV~~t~~~l~~~~~~~~~-~~~~~~~~~~~~~~~--~p~~~~~g~~~~~~~~l~~G-~~~~~~~-~~~ 262 (544)
...||||||.|-.+..+............. ..+.+...++.+..+ .+. +.+. ++... ..+...+ ..+
T Consensus 104 v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly~-------~~~~~~~~~~~~~l~~~ 175 (430)
T TIGR02304 104 VGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLYQ-------SVNNRWISLDFFDLLAP 175 (430)
T ss_pred EEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHHH-------HHHhccceeeecCCCcC
Confidence 345999999999999988865433322222 221233443433333 111 2111 11111 1112222 245
Q ss_pred HHHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeEEecccCccccc
Q 039837 263 LRAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEAYGLTEHSC 342 (544)
Q Consensus 263 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~ 342 (544)
.+.+++.|++++|+++.+.|+.+..|++.....+.. +..+.++++||.++++..+.+.+.| ++++++.||+|| |.
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~---~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~ 250 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT---IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GF 250 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC---CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hh
Confidence 788999999999999999999999998865443332 3345599999999999999999999 899999999999 64
Q ss_pred cccccCCCCCCCCCCCCCcccccCCCceEE--EEeCCCCCcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeec
Q 039837 343 ITLTYGDPANPSAGSKKNSVGFILPNLEVK--FINPETGKSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHT 420 (544)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~--i~d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~T 420 (544)
++..+. .+....-...+-++ ++|+ ++. ++.+|++=. + ..+ +--.|+|
T Consensus 251 la~eC~----------~g~lHl~ed~~~vE~~ivD~-~~~-------~~~ViT~L~------n------~~~-PlIRYrt 299 (430)
T TIGR02304 251 LASTCR----------CGTLHLNEDLVHIEKQYLDE-HKR-------FVPIITDFT------R------TTQ-PIVRYRL 299 (430)
T ss_pred eEEecC----------CCCEEEccccEEEEeeEECC-CCc-------eEEEEecCC------C------ccc-eEEeeeC
Confidence 433221 12222222334444 7774 332 344665421 1 011 2335999
Q ss_pred CceEEEcCC----Cc----E-EEEeecCCceee---cce--eeChHHHHHHHh-cCCCccceEEEe
Q 039837 421 GDIGYIDDD----GD----I-FIVDRIKELIKY---KGF--QVAPAELEAILL-THPSVEDAAVVS 471 (544)
Q Consensus 421 GD~~~~~~~----g~----~-~~~GR~~d~i~~---~G~--~v~~~~iE~~l~-~~~~v~~~~v~~ 471 (544)
||++.+..+ |. + .+.||.+|++++ +|. +++|..++.++. ..++|.++.++.
T Consensus 300 GD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q 365 (430)
T TIGR02304 300 NDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQ 365 (430)
T ss_pred CCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEE
Confidence 999998554 32 3 388999999985 454 459999998854 568999988874
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.30 E-value=4.2e-12 Score=92.31 Aligned_cols=70 Identities=39% Similarity=0.616 Sum_probs=61.8
Q ss_pred HHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccCCCce--eEEEEeec-CCCCCCcc
Q 039837 453 ELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVATYKKV--RVLHFVDG-IPKSHSGK 528 (544)
Q Consensus 453 ~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p--~~~~~~~~-~P~t~~GK 528 (544)
|||++|.+||+|.+++|++.+++..|+.+++++++ +.+++.++++++|+.|++| ..++.+++ ||+|++||
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~GK 73 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPSGK 73 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETTSS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe------eecccccchhhhCCCcceeeEEEEccccCcCCCCCCCC
Confidence 69999999999999999999999889999999988 4499999999999999999 55666677 99999998
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.90 E-value=8.2e-08 Score=92.34 Aligned_cols=224 Identities=17% Similarity=0.195 Sum_probs=130.0
Q ss_pred CCCCCCCCCcCcceeeccHHHHHHHHHhhccccC--Ccc-cCccEEEEecchhHH---HHH-HHHHHhhHhccceEEEcC
Q 039837 187 DDDVKQTDLWISKGVMLTHRNLVANLCSTLFSVV--PEM-IGQVTTLGLIPFFHI---YGI-TGICCATLRNKGKVVMMN 259 (544)
Q Consensus 187 ~~~~tsgttG~PKgV~~t~~~l~~~~~~~~~~~~--~~~-~~~~~~~~~~p~~~~---~g~-~~~~~~~l~~G~~~~~~~ 259 (544)
....+|||+|.|--+.+.+..+......+...+. ... .....++...|-... ++. ....+.....+....+-+
T Consensus 93 ~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (365)
T PF04443_consen 93 KVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGSRFALDN 172 (365)
T ss_pred eEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCceeeecC
Confidence 3467899999986666666655554433332221 011 112233333333211 111 112223334555534422
Q ss_pred -ccCHHHHHHHHH----HcCceeeecchHHHHHHhcCCCCCc--cCccc-cccccEEEec------CCCCH-hHHHHHHh
Q 039837 260 -RFELRAFLDALI----THEVTFAPIVPPIILSLVKDPIVDE--FDLSK-LQLRAVMTAA------APLAP-DLLSSFEK 324 (544)
Q Consensus 260 -~~~~~~~~~~i~----~~~~t~~~~~P~~~~~l~~~~~~~~--~~~~~-l~~~~v~~~G------~~~~~-~~~~~~~~ 324 (544)
.++.+.+.+.+. +.++..++++|.++..++...+... ..++. ..+ +..|| +.+++ ++.+.+.+
T Consensus 173 ~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~v--i~~GGwK~~~~e~v~r~ef~~~l~~ 250 (365)
T PF04443_consen 173 DELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIV--IHGGGWKGRRKEAVSREEFYARLQE 250 (365)
T ss_pred CccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEE--EeCCCCCccccCccCHHHHHHHHHH
Confidence 356665555553 4678999999998877765433332 23332 223 44444 24654 66667777
Q ss_pred hcCCC----eEEecccCccccccccccCCCCCCCCCCCCCcccccCCCceEEEEeCCCCCcCCCCCCceEEEeccccccc
Q 039837 325 KFPGV----QVQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLEVKFINPETGKSLPSNTPGELCVRSQCVMQG 400 (544)
Q Consensus 325 ~~~~~----~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~~~~~~~g 400 (544)
.| |+ .+++.|||||.....+.+. .+. .+.|-. +.|.|+++..+++.|+.|-|.+-++... .
T Consensus 251 ~~-Gv~~~~~i~~~ygmtEl~s~~~~~~----------~~~--~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~~~-s 315 (365)
T PF04443_consen 251 VF-GVIPIENIYDMYGMTELNSQAYECG----------HGH--FHVPPW-VIIRDPETLEPLPPGETGLIQVIDLANT-S 315 (365)
T ss_pred HH-CCCCHHHeeeeeeccccchhheeCC----------CCc--ccCCCe-EEEECCCCCcCCCCCCeeEEEEEccccc-C
Confidence 78 55 7999999999876554331 011 122222 7777999999999999999988765432 1
Q ss_pred ccCChhhhhcccCCCCeeecCceEEEcCC--------CcEEEEeecCC
Q 039837 401 YYNNEEETARTIDKNGWLHTGDIGYIDDD--------GDIFIVDRIKE 440 (544)
Q Consensus 401 y~~~~~~~~~~~~~~~~~~TGD~~~~~~~--------g~~~~~GR~~d 440 (544)
..+..-|.|+|.+..+ .++.++||.+.
T Consensus 316 -------------~p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 316 -------------YPGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred -------------CCcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 2345779999988654 26899999874
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.03 E-value=7.5e-05 Score=76.46 Aligned_cols=178 Identities=16% Similarity=0.239 Sum_probs=101.2
Q ss_pred ccccccccEEEecCCCCHhHHHHHHhhcCCCeEE-ecccCccccccccccCCCCCCCCCCCCCcccccCCCc-eEEEEeC
Q 039837 299 LSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQ-EAYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNL-EVKFINP 376 (544)
Q Consensus 299 ~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~d~ 376 (544)
++.+++ |.+.+..-......++++.++++.++ ..|++||.- +.+.. .... ..+...++. -++.++.
T Consensus 266 WP~L~~--v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~-i~i~~-------~~~~--~~~~l~~~~~ffEFip~ 333 (528)
T PF03321_consen 266 WPNLKL--VSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGF-IGIPL-------DPED--PGYVLAPDSGFFEFIPV 333 (528)
T ss_dssp STT--E--EEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEE-EEEES--------CCC----EEE-TTSSEEEEEE-
T ss_pred CCCCcE--EEEEcCCChHHHHHHHHHHcCCCceeeccccccceE-EEEec-------CCCC--CceEeecCCeEEEEEec
Confidence 556665 65555555556778888888776655 459999953 33221 1111 122233332 4555553
Q ss_pred CC--------CC-----cCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcC--CC--cEEEEeecC
Q 039837 377 ET--------GK-----SLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDD--DG--DIFIVDRIK 439 (544)
Q Consensus 377 ~~--------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~--~g--~~~~~GR~~ 439 (544)
++ .+ .+..|+..||+++..+ |.|+ |+.||+++... ++ .+.|.||.+
T Consensus 334 ~~~~~~~~~~~~~l~~~ele~G~~YelviTt~~---GLyR--------------Y~iGDvVrv~gf~~~~P~i~F~~R~~ 396 (528)
T PF03321_consen 334 DEDEQNPSEQPKTLLLHELEVGEEYELVITTNS---GLYR--------------YRIGDVVRVTGFYNQTPRIEFVGRRG 396 (528)
T ss_dssp STT-------SSSEEGGG--TT-EEEEEEESTT---S-SS--------------EEECEEEEEEEEETTEEEEEEEEETT
T ss_pred cCCcccccCCCceecHHHhcCCCeEEEEEeccc---ceee--------------eecCCEEEEeeccCCCcEEEEeccCC
Confidence 32 22 3567888899998642 3332 89999999843 34 699999999
Q ss_pred CceeecceeeChHHHHHHHhcC-----CCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcc
Q 039837 440 ELIKYKGFQVAPAELEAILLTH-----PSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNV 506 (544)
Q Consensus 440 d~i~~~G~~v~~~~iE~~l~~~-----~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 506 (544)
..+.+.|++++-.++++++.+. -.+.+..+...........-+.++++... ..+.+.+.+.+.+.|
T Consensus 397 ~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~-~~~~~~~~~~lD~~L 467 (528)
T PF03321_consen 397 QVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE-PDDLEELAKALDESL 467 (528)
T ss_dssp EEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS--HHHHHHHHHHHHHCS
T ss_pred ceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC-chHHHHHHHHHHHHh
Confidence 9999999999999999999775 34667777655322333445566665544 223455666665555
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.85 E-value=0.003 Score=65.05 Aligned_cols=135 Identities=16% Similarity=0.192 Sum_probs=83.1
Q ss_pred cccccccc-EEEecCCCCHhHHHHHHhhcCCCe-EEecccCccccccccccCCCCCCCCCCCCCccccc--CCCceEEEE
Q 039837 299 LSKLQLRA-VMTAAAPLAPDLLSSFEKKFPGVQ-VQEAYGLTEHSCITLTYGDPANPSAGSKKNSVGFI--LPNLEVKFI 374 (544)
Q Consensus 299 ~~~l~~~~-v~~~G~~~~~~~~~~~~~~~~~~~-i~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~--~~~~~~~i~ 374 (544)
++.+++-. +..||.. .....++..+++.. +...|++||.-..+-.. ....+...+.. ..+.-.+.+
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~~gi~~~-------~~~~p~~~~~~l~~~~~ffEFi 370 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESYFGINLN-------PMCKPSEVSYTIMPNMAYFEFL 370 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceEEEeecC-------CCCCCCCcceEecCCcEEEEee
Confidence 45655433 4444433 56677777776665 55669999954322111 11111112211 224455565
Q ss_pred eCC-CC------------CcCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcC----CCcEEEEee
Q 039837 375 NPE-TG------------KSLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDD----DGDIFIVDR 437 (544)
Q Consensus 375 d~~-~~------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~~~~~GR 437 (544)
+.+ .+ ..+..|+..+|+|+..+ |.| .|+.||+++... --++.|.||
T Consensus 371 P~~~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~~---GLy--------------RY~iGDvVrvtgf~~~~P~i~F~gR 433 (597)
T PLN02249 371 PHNHDGDGALDETSLVELADVEVGKEYELVITTYA---GLY--------------RYRVGDILRVTGFHNSAPQFKFIRR 433 (597)
T ss_pred ecccCCcccCCCCcEecHHHcCCCCeEEEEEEccc---cee--------------EeecCCEEEEeeccCCCcEEEEEcc
Confidence 421 11 12456777889998532 222 288999999854 246999999
Q ss_pred cCCceeecceeeChHHHHHHHhc
Q 039837 438 IKELIKYKGFQVAPAELEAILLT 460 (544)
Q Consensus 438 ~~d~i~~~G~~v~~~~iE~~l~~ 460 (544)
.+..+.+.|+++.-.+++++|.+
T Consensus 434 ~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 434 KNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred CCcceecccccCCHHHHHHHHHH
Confidence 99999999999999999998876
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.77 E-value=0.0023 Score=65.30 Aligned_cols=138 Identities=12% Similarity=0.138 Sum_probs=85.5
Q ss_pred ccccccccEEEecCCCCHhHHHHHHhhcCCCeEEec-ccCccccccccccCCCCCCCCCCCCCcccccCCCce-EEEEeC
Q 039837 299 LSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQEA-YGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLE-VKFINP 376 (544)
Q Consensus 299 ~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~~-yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~i~d~ 376 (544)
++.+++ |.+....-.......++..+++++++.. |++||+-+.+-..+ ........+..+|+.. .+.++.
T Consensus 303 WP~lk~--I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P------~~~p~~~sy~L~p~~~yFEFip~ 374 (612)
T PLN02620 303 WPNTKY--VDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNP------LCKPSEVSYTLIPTMAYFEFLPV 374 (612)
T ss_pred CCCCcE--EEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCC------CCCcccceeeecCCcEEEEEeec
Confidence 455555 5555444555666777777778877665 99999654443222 1111111223334433 334431
Q ss_pred CC-------------------CC-----cCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEc----C
Q 039837 377 ET-------------------GK-----SLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYID----D 428 (544)
Q Consensus 377 ~~-------------------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~----~ 428 (544)
+. ++ .+..|+.-||+|+.-+ |.| .||.||+.+.. .
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~~---GLy--------------RYrlGDvv~V~Gf~n~ 437 (612)
T PLN02620 375 HRNNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTYA---GLY--------------RYRVGDVLRVAGFKNK 437 (612)
T ss_pred cCcccccccccccccccccccCccccHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEeeecCC
Confidence 11 11 1466778899998522 222 38899999974 3
Q ss_pred CCcEEEEeecCCceeecceeeChHHHHHHHhcC
Q 039837 429 DGDIFIVDRIKELIKYKGFQVAPAELEAILLTH 461 (544)
Q Consensus 429 ~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 461 (544)
.-.+.|++|.+.+..+.|++.+-.++-+++.+.
T Consensus 438 ~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 438 APQFSFICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred CceEEEEeecCceeecccccCCHHHHHHHHHHH
Confidence 457999999999999999999999998877653
No 137
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.74 E-value=8.3e-05 Score=56.93 Aligned_cols=84 Identities=21% Similarity=0.374 Sum_probs=48.7
Q ss_pred ceeeChHHHHHHHhcCCCcc-ceEEEeecCCCCCceeEEEEEeCCCCCC---CHHHHHHHHHhcccC-CCceeEEEEe--
Q 039837 446 GFQVAPAELEAILLTHPSVE-DAAVVSLPDEEAGEIPAACVVMNPNAKE---SEDDIMDFVASNVAT-YKKVRVLHFV-- 518 (544)
Q Consensus 446 G~~v~~~~iE~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~l~~~l~~-~~~p~~~~~~-- 518 (544)
|.|++|.+||++|.++|++. ++.++ +......+.+.+.++..++... ..+.+.+.+.+.+.. ..+-..+.++
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~-v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv~~~V~lv~~ 79 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIV-VTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGVRPEVELVPP 79 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEE-EEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS-EEEEEE-T
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEE-EEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCceEEEEEECC
Confidence 78999999999999999999 45544 4434456778888888775432 224444444443321 1222245455
Q ss_pred ecCCCCCCcccch
Q 039837 519 DGIPKSHSGKIMR 531 (544)
Q Consensus 519 ~~~P~t~~GKi~r 531 (544)
++||++ .||..|
T Consensus 80 gtLpr~-~~K~~R 91 (96)
T PF14535_consen 80 GTLPRS-EGKAKR 91 (96)
T ss_dssp T-S----SSSS-S
T ss_pred CCccCC-CCcceE
Confidence 689998 578766
No 138
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.18 E-value=0.0051 Score=62.93 Aligned_cols=138 Identities=14% Similarity=0.165 Sum_probs=88.0
Q ss_pred ccccccccEEEecCCCCHhHHHHHHhhcCCCeEEe-cccCccccccccccCCCCCCCCCCCCCcccccCCCce-EEEEeC
Q 039837 299 LSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQVQE-AYGLTEHSCITLTYGDPANPSAGSKKNSVGFILPNLE-VKFINP 376 (544)
Q Consensus 299 ~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i~~-~yG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~i~d~ 376 (544)
++.+++ |.+....-.......++..+++++++. .||+||+-+.+-..+ ........+..+|+.. .+.++.
T Consensus 292 WP~lk~--I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~p------~~~p~~~sy~L~p~~~yFEFip~ 363 (606)
T PLN02247 292 WPRTKY--IEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLKP------LSDPSDVSYTLLPNMAYFEFLPV 363 (606)
T ss_pred CCCCcE--EEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccCc------CCCccCCceeecCCcEEEEEeec
Confidence 566666 555544456667778887778888776 599999654443221 1111112233334433 334431
Q ss_pred CCCC-----------------------------cCCCCCCceEEEecccccccccCChhhhhcccCCCCeeecCceEEEc
Q 039837 377 ETGK-----------------------------SLPSNTPGELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYID 427 (544)
Q Consensus 377 ~~~~-----------------------------~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~ 427 (544)
+++. .+..|+.-||+|+.-+ |.| .||.||+.+..
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~~---GLY--------------RYrlGDvv~V~ 426 (606)
T PLN02247 364 DKNNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTFT---GLY--------------RYRVGDILMVT 426 (606)
T ss_pred CCCcccccccccccccccccccccccCceecHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEe
Confidence 2211 3456777889888421 222 38899999974
Q ss_pred ----CCCcEEEEeecCCceeecceeeChHHHHHHHhcC
Q 039837 428 ----DDGDIFIVDRIKELIKYKGFQVAPAELEAILLTH 461 (544)
Q Consensus 428 ----~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 461 (544)
..-.+.|++|.+.+..+.|++.+-.++-+++.+.
T Consensus 427 GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 427 GFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred eecCCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 3467999999999999999999999998888663
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=94.72 E-value=0.23 Score=48.81 Aligned_cols=87 Identities=16% Similarity=0.099 Sum_probs=72.5
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNV--AEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
-+|+.|+...+..+|+.|...|...||+|..+..-+ ..-+...+|+.++|++++|+.+.. .+.-..++++.++.+|.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~-~~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN-TERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc-HHHHHHHHHhcCCcEEE
Confidence 489999999999999999999999999998877722 122677889999999999999844 45667889999999999
Q ss_pred eccchHHHhh
Q 039837 141 SYAPIYEKVK 150 (544)
Q Consensus 141 ~~~~~~~~~~ 150 (544)
+.+.....+.
T Consensus 188 ~tps~~l~la 197 (438)
T COG1541 188 ATPSYLLYLA 197 (438)
T ss_pred EChHHHHHHH
Confidence 9888665543
No 140
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=86.19 E-value=5.1 Score=40.30 Aligned_cols=86 Identities=12% Similarity=0.077 Sum_probs=65.2
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA--EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
.+|..++......++..+...|+++||++......+. ......++....|+..++++... .+.+...+++.++++++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 3688888777777777888889999999887765543 22234567888999999887765 56788899999999999
Q ss_pred eccchHHHh
Q 039837 141 SYAPIYEKV 149 (544)
Q Consensus 141 ~~~~~~~~~ 149 (544)
..+.....+
T Consensus 173 ~~Ps~l~~L 181 (422)
T TIGR02155 173 VTPSYMLNL 181 (422)
T ss_pred EcHHHHHHH
Confidence 887765443
No 141
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=86.15 E-value=6.3 Score=39.97 Aligned_cols=80 Identities=13% Similarity=0.122 Sum_probs=60.7
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--HHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAE--YGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
.+|..++...+...+..+...|+.+||++.+..+.+.. .....+++...|+..++... ......+++..++.+++
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~ 181 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIV 181 (445)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEE
Confidence 47999999988888888888899999999998876543 23445778899998876643 23456778889999887
Q ss_pred eccch
Q 039837 141 SYAPI 145 (544)
Q Consensus 141 ~~~~~ 145 (544)
.....
T Consensus 182 ~~ps~ 186 (445)
T TIGR03335 182 ASVFK 186 (445)
T ss_pred ECHHH
Confidence 65443
No 142
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=71.51 E-value=34 Score=35.25 Aligned_cols=84 Identities=15% Similarity=0.245 Sum_probs=63.2
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA--EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
.+|+..+...+..+... .+++++|++...++-.. .+...+++++..|+..++. +..+++.+...+++.++.++.
T Consensus 185 ~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 260 (513)
T PRK07656 185 MLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVLP 260 (513)
T ss_pred EEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEEe
Confidence 57999887666554433 37889999988877543 3345578889999988765 567788999999999999998
Q ss_pred eccchHHHhh
Q 039837 141 SYAPIYEKVK 150 (544)
Q Consensus 141 ~~~~~~~~~~ 150 (544)
..+..+..+.
T Consensus 261 ~~p~~~~~l~ 270 (513)
T PRK07656 261 GPPTMYNSLL 270 (513)
T ss_pred chHHHHHHHH
Confidence 8877666553
No 143
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=70.79 E-value=28 Score=35.93 Aligned_cols=84 Identities=11% Similarity=0.116 Sum_probs=63.5
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc-cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEe
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA-EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVS 141 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 141 (544)
.+|+..+...+..... ..+++++|++....+-.. ..+...++++..|+..+..+.. +.+.+...+++.++..+++
T Consensus 186 ~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~ 261 (521)
T PRK06187 186 VLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFFA 261 (521)
T ss_pred EeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEEc
Confidence 4799988876665544 457899999988877543 2234445588889998877664 8889999999999999999
Q ss_pred ccchHHHhh
Q 039837 142 YAPIYEKVK 150 (544)
Q Consensus 142 ~~~~~~~~~ 150 (544)
.+.....+.
T Consensus 262 ~p~~~~~l~ 270 (521)
T PRK06187 262 VPTIWQMLL 270 (521)
T ss_pred hHHHHHHHH
Confidence 887766554
No 144
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=70.76 E-value=19 Score=35.17 Aligned_cols=65 Identities=18% Similarity=0.203 Sum_probs=50.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCC-----CCHHHHHHHHHhcCceEEEe
Q 039837 73 TRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPT-----AHASELKKQVDAADAKLIVS 141 (544)
Q Consensus 73 ~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 141 (544)
+..+--.|+..||++||-|.+ .+..++...=+++..|+.+|.+|-+ .+++.++..+... .++|+.
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 445556677778999996654 3578889999999999999988764 6688888888775 566653
No 145
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=67.74 E-value=27 Score=31.58 Aligned_cols=54 Identities=24% Similarity=0.363 Sum_probs=43.2
Q ss_pred HHcCCCCCCEEEEEcCCCc--cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCc
Q 039837 81 RSLGLRKGQVVIVVLPNVA--EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADA 136 (544)
Q Consensus 81 ~~~Gi~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 136 (544)
...|+.++|++. ..|-.- -+...+++++..|++.+.+ ++++++.+-+.+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 556889999999 888443 3445689999999998887 68899998888887765
No 146
>PRK12583 acyl-CoA synthetase; Provisional
Probab=64.21 E-value=82 Score=32.89 Aligned_cols=82 Identities=15% Similarity=0.194 Sum_probs=60.9
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPN--VAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
.+|+..+...+..+... .|++++|++....+- ....+..+++++..|+..+.......+..+...+++.++..++
T Consensus 220 ~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~ 296 (558)
T PRK12583 220 TLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALY 296 (558)
T ss_pred EeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEe
Confidence 57999887666554443 378899999877763 3455666788888999887555566788888999999999988
Q ss_pred eccchHH
Q 039837 141 SYAPIYE 147 (544)
Q Consensus 141 ~~~~~~~ 147 (544)
..+..+.
T Consensus 297 ~~P~~~~ 303 (558)
T PRK12583 297 GVPTMFI 303 (558)
T ss_pred ccHHHHH
Confidence 7766543
No 147
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=63.22 E-value=49 Score=33.18 Aligned_cols=118 Identities=9% Similarity=0.202 Sum_probs=80.7
Q ss_pred CCCCCCCCCHHHHHHhhhh------------hcCCceEEE-Ec--cC----CceeeHHHHHHHHHHHHHHHHHcCCCCCC
Q 039837 29 AVPVPENVTLPDFVLQDAE------------LYADKVAFV-EA--VS----GKAYTYAQVARDTRGFAKALRSLGLRKGQ 89 (544)
Q Consensus 29 ~~~~~~~~~l~~~l~~~a~------------~~p~~~a~~-~~--~~----~~~~Ty~el~~~~~~la~~L~~~Gi~~gd 89 (544)
+.+.+.-..+.+++....+ ..||..+.+ +. .. +.++|.-++...+..++..+ |+...+
T Consensus 200 d~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~ 276 (596)
T KOG1177|consen 200 DHPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKH 276 (596)
T ss_pred CCcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcce
Confidence 4555555566666654332 135555533 32 11 35799999998887665543 666655
Q ss_pred EEEEEcC--CCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHh
Q 039837 90 VVIVVLP--NVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKV 149 (544)
Q Consensus 90 ~V~i~~~--n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 149 (544)
++++-.| .+.-.++..+|++..|++.|.-.|.+.+..+-+.+.+.++.+++..+..+-.+
T Consensus 277 ~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dl 338 (596)
T KOG1177|consen 277 RICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDL 338 (596)
T ss_pred EEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHH
Confidence 6555444 33455677889999999999989999999999999999999999877655443
No 148
>PRK08315 AMP-binding domain protein; Validated
Probab=63.19 E-value=43 Score=35.00 Aligned_cols=83 Identities=8% Similarity=0.079 Sum_probs=61.3
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEE
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPN--VAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLI 139 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 139 (544)
-.+|+..+...+..+... .+++++|++....+- ...++..+++.+..|+..+......++..+-..+++.++..+
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 357888887665544433 478999999887774 334455678888899888755666778888999999999999
Q ss_pred EeccchHH
Q 039837 140 VSYAPIYE 147 (544)
Q Consensus 140 i~~~~~~~ 147 (544)
+..+..+.
T Consensus 294 ~~~P~~~~ 301 (559)
T PRK08315 294 YGVPTMFI 301 (559)
T ss_pred ecchHHHH
Confidence 87766543
No 149
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=62.01 E-value=48 Score=33.26 Aligned_cols=83 Identities=11% Similarity=0.109 Sum_probs=61.0
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc-cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA-EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
-.+|++.+...+...+..+ +++++|++....+-.. ..+..+++.+..|+..+..++. +.+...+++.++..+.
T Consensus 129 v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 3689999988776665543 7899999988877432 2234567888899988877543 3788889999999998
Q ss_pred eccchHHHhh
Q 039837 141 SYAPIYEKVK 150 (544)
Q Consensus 141 ~~~~~~~~~~ 150 (544)
..+..+..+.
T Consensus 203 ~~P~~l~~l~ 212 (436)
T TIGR01923 203 LVPTQLNRLL 212 (436)
T ss_pred eHHHHHHHHH
Confidence 8777665543
No 150
>PLN03051 acyl-activating enzyme; Provisional
Probab=62.00 E-value=62 Score=33.31 Aligned_cols=85 Identities=12% Similarity=-0.020 Sum_probs=59.6
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc-cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA-EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
-.+|+..+...+.... ...++.++|++...++-+. ..+..+++.+..|+..+..+.......+...+++.++.++.
T Consensus 137 V~~sh~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 137 IPWTHLSPLRCASDGW---AHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEEccchHHHHHHHHH---HhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 3578877655443322 3457889998877666332 22345678889999988776555677889999999999999
Q ss_pred eccchHHHh
Q 039837 141 SYAPIYEKV 149 (544)
Q Consensus 141 ~~~~~~~~~ 149 (544)
..+..+..+
T Consensus 214 ~vP~~~~~l 222 (499)
T PLN03051 214 LVPSIVKAW 222 (499)
T ss_pred eCHHHHHHH
Confidence 877766544
No 151
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=60.67 E-value=1e+02 Score=32.20 Aligned_cols=98 Identities=16% Similarity=0.204 Sum_probs=67.1
Q ss_pred cCCceEEEEccCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHHHhcCeeecCC
Q 039837 49 YADKVAFVEAVSG-------KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNV--AEYGIVALGIMAAGGVFSGAN 119 (544)
Q Consensus 49 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~ 119 (544)
.|+.+|++.-.+| -.+|++.+...+.... ...++.++|++...+|-. ..+...++..+..|+..+...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 4677776532122 3589998876654433 335678899988877743 223334566778888877665
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchHHHh
Q 039837 120 PTAHASELKKQVDAADAKLIVSYAPIYEKV 149 (544)
Q Consensus 120 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 149 (544)
....+..+...+++.++..+...+..+..+
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 287 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYI 287 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHH
Confidence 557788999999999999998877765544
No 152
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=60.39 E-value=21 Score=29.25 Aligned_cols=43 Identities=16% Similarity=0.080 Sum_probs=34.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC---CccHHHHHHHHHHhcCeee
Q 039837 74 RGFAKALRSLGLRKGQVVIVVLPN---VAEYGIVALGIMAAGGVFS 116 (544)
Q Consensus 74 ~~la~~L~~~Gi~~gd~V~i~~~n---~~~~~~~~lA~~~~G~~~v 116 (544)
+.+++.|.+.||.+++.|.+++.. +.....+++++-..|..-|
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 467888999999999999999975 5666677788888887543
No 153
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=59.75 E-value=61 Score=33.36 Aligned_cols=85 Identities=11% Similarity=0.092 Sum_probs=64.6
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-HHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAE-YGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
-.+|+..+...+..+...+ +++++|++...++-+.. .+..+++++..|+..+.. +...++.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 4579999887777665443 57899999888885432 345677888999998865 456788999999999999999
Q ss_pred eccchHHHhh
Q 039837 141 SYAPIYEKVK 150 (544)
Q Consensus 141 ~~~~~~~~~~ 150 (544)
..+.....+.
T Consensus 255 ~~P~~~~~l~ 264 (515)
T TIGR03098 255 AVPPLWAQLA 264 (515)
T ss_pred cChHHHHHHH
Confidence 8887765543
No 154
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=56.14 E-value=1.3e+02 Score=29.57 Aligned_cols=98 Identities=15% Similarity=0.132 Sum_probs=70.4
Q ss_pred CCceEEEEccCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-HHHHHHHHHHhcCeeecCCCC
Q 039837 50 ADKVAFVEAVSG-------KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAE-YGIVALGIMAAGGVFSGANPT 121 (544)
Q Consensus 50 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~ 121 (544)
++.++++.-.+| -.+|+..+...+..+.. ..+++++|++....+-+.. .+..+++.+..|+..+..+..
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 566666532122 35788888877766655 3467889999888875543 455577888889888877766
Q ss_pred CC--HHHHHHHHHhcCceEEEeccchHHHhh
Q 039837 122 AH--ASELKKQVDAADAKLIVSYAPIYEKVK 150 (544)
Q Consensus 122 ~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~ 150 (544)
.. ...+..++++.++..+++.+.....+.
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~ 226 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLA 226 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHH
Confidence 55 788999999999999998888766554
No 155
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=55.32 E-value=1e+02 Score=28.47 Aligned_cols=78 Identities=10% Similarity=0.128 Sum_probs=49.6
Q ss_pred eHHHHHH-HHHHHHHHHHHcC-CCCCCEEEEEcCCCccHHHHHHHHHHh------c--CeeecCCCC---CCHHHHHHHH
Q 039837 65 TYAQVAR-DTRGFAKALRSLG-LRKGQVVIVVLPNVAEYGIVALGIMAA------G--GVFSGANPT---AHASELKKQV 131 (544)
Q Consensus 65 Ty~el~~-~~~~la~~L~~~G-i~~gd~V~i~~~n~~~~~~~~lA~~~~------G--~~~v~l~~~---~~~~~l~~~l 131 (544)
++..+.+ ..+++.+.+.+.+ +.+|++|++.+.-+.++++++..+... | ..++-++.. +..+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 3344444 3445556677654 578999999999999999987776443 2 344555553 3344456666
Q ss_pred HhcCceEEEec
Q 039837 132 DAADAKLIVSY 142 (544)
Q Consensus 132 ~~~~~~~ii~~ 142 (544)
+..+..+.+..
T Consensus 84 ~~lgI~~~v~~ 94 (258)
T PRK10696 84 ESLGVPYHIEE 94 (258)
T ss_pred HHhCCCEEEEE
Confidence 66666665543
No 156
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=54.71 E-value=1.1e+02 Score=32.25 Aligned_cols=85 Identities=5% Similarity=-0.119 Sum_probs=61.9
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA--EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
.+|+..+...+... ....+++++|++....+... .....+++.+..|+..+......+++.+...+++.++.++.
T Consensus 224 ~~s~~~l~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~ 300 (570)
T PRK04319 224 LHVHNAMLQHYQTG---KYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWY 300 (570)
T ss_pred EEecHHHHHHHHHH---HHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEE
Confidence 57888876544332 33457889998766655432 23445778888999888777778899999999999999999
Q ss_pred eccchHHHhh
Q 039837 141 SYAPIYEKVK 150 (544)
Q Consensus 141 ~~~~~~~~~~ 150 (544)
..+..+..+.
T Consensus 301 ~~P~~~~~l~ 310 (570)
T PRK04319 301 TAPTAIRMLM 310 (570)
T ss_pred eCHHHHHHHH
Confidence 8887766553
No 157
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=54.66 E-value=1.2e+02 Score=28.38 Aligned_cols=95 Identities=17% Similarity=0.144 Sum_probs=60.2
Q ss_pred CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCC----CHHHHHHHHHhcCc
Q 039837 61 GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTA----HASELKKQVDAADA 136 (544)
Q Consensus 61 ~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~ 136 (544)
+..+-.+-+. |.-.+|+.|++. |..|.+++.+....... .+...|..+..++... ..+++..+++..++
T Consensus 9 ~~~iG~GHv~-Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~ 81 (279)
T TIGR03590 9 SSEIGLGHVM-RCLTLARALHAQ----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKF 81 (279)
T ss_pred CccccccHHH-HHHHHHHHHHHC----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCC
Confidence 3445555544 567899999764 45777777765554433 3357777766665433 34568888999999
Q ss_pred eEEEeccc-----hHHHhhcCCCcEEEeccc
Q 039837 137 KLIVSYAP-----IYEKVKGLGLPIIVLGEE 162 (544)
Q Consensus 137 ~~ii~~~~-----~~~~~~~~~~~~~~~~~~ 162 (544)
+++|++.- ....+.....+++++++.
T Consensus 82 d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~ 112 (279)
T TIGR03590 82 DILIVDHYGLDADWEKLIKEFGRKILVIDDL 112 (279)
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCeEEEEecC
Confidence 99998753 233344445566777653
No 158
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=54.28 E-value=39 Score=33.16 Aligned_cols=87 Identities=26% Similarity=0.251 Sum_probs=54.7
Q ss_pred HHHHH-hhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeec
Q 039837 39 PDFVL-QDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSG 117 (544)
Q Consensus 39 ~~~l~-~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 117 (544)
.+.|+ +.++.+..+-++... .. +..+-..|...|+++||.|++- ...+....-|+..+|+.+|.
T Consensus 27 ~~~fE~~~a~~~g~~~~~~~~--sg----------t~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~ 91 (363)
T PF01041_consen 27 VEEFEKEFAEYFGVKYAVAVS--SG----------TSALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVF 91 (363)
T ss_dssp HHHHHHHHHHHHTSSEEEEES--SH----------HHHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEE
T ss_pred HHHHHHHHHHHhCCCeEEEeC--Ch----------hHHHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEE
Confidence 33343 445556666666554 11 2344456677899999999776 45566777889999999888
Q ss_pred CCCC-----CCHHHHHHHHHhcCceEEEe
Q 039837 118 ANPT-----AHASELKKQVDAADAKLIVS 141 (544)
Q Consensus 118 l~~~-----~~~~~l~~~l~~~~~~~ii~ 141 (544)
+|-+ .+++.++..++.-. ++|+.
T Consensus 92 ~Di~~~~~~id~~~~~~~i~~~t-~ai~~ 119 (363)
T PF01041_consen 92 VDIDPETLNIDPEALEKAITPKT-KAILV 119 (363)
T ss_dssp E-BETTTSSB-HHHHHHHHHTTE-EEEEE
T ss_pred EeccCCcCCcCHHHHHHHhccCc-cEEEE
Confidence 7764 55778888776443 55554
No 159
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=53.76 E-value=1.2e+02 Score=30.90 Aligned_cols=84 Identities=13% Similarity=0.142 Sum_probs=60.5
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc-cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEe
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA-EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVS 141 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 141 (544)
.+|++.+...+... ....+++++|++...++-.- ..+..+++.+..|+..+..+ ..+...+...+++.++..+..
T Consensus 160 ~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 235 (483)
T PRK03640 160 IQTYGNHWWSAVGS---ALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISV 235 (483)
T ss_pred EEecHHHHHHHHHH---HHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEe
Confidence 57888876554332 23358899999999887432 22344567777899887665 567889999999999999998
Q ss_pred ccchHHHhh
Q 039837 142 YAPIYEKVK 150 (544)
Q Consensus 142 ~~~~~~~~~ 150 (544)
.+..+..+.
T Consensus 236 ~P~~~~~l~ 244 (483)
T PRK03640 236 VSTMLQRLL 244 (483)
T ss_pred HHHHHHHHH
Confidence 887766543
No 160
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=51.56 E-value=71 Score=31.72 Aligned_cols=97 Identities=19% Similarity=0.265 Sum_probs=68.2
Q ss_pred cCCceEEEEccCC-------ceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCc--cHHHHHHHHHHhcCeeecC
Q 039837 49 YADKVAFVEAVSG-------KAYTYAQVARDTRGFAKALRS-LGLRKGQVVIVVLPNVA--EYGIVALGIMAAGGVFSGA 118 (544)
Q Consensus 49 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~-~Gi~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l 118 (544)
.|++++++.-..| -.+|++.+...+..++ +.. .+++ |++...++-+- .++..+++.+..|+..+..
T Consensus 153 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 228 (417)
T PF00501_consen 153 SPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLP 228 (417)
T ss_dssp TTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEE
T ss_pred CccceeEeeccccccccccccccccccccccccccc--cccccccC--ceEEeecccccccccccccccccccccccccc
Confidence 5688887642222 3589999999988877 433 2333 66666666442 3336789999999999988
Q ss_pred CCCCC--HHHHHHHHHhcCceEEEeccchHHHh
Q 039837 119 NPTAH--ASELKKQVDAADAKLIVSYAPIYEKV 149 (544)
Q Consensus 119 ~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~ 149 (544)
+.... ++.+...+++.++..+++.+..+..+
T Consensus 229 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 261 (417)
T PF00501_consen 229 SPFDLFDPESLLELISRYKPTILFAVPSMLEAL 261 (417)
T ss_dssp SSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHH
T ss_pred ccccccccccchhcccccccccccccccccccc
Confidence 76644 56778999999999999887776554
No 161
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=51.12 E-value=1.6e+02 Score=30.78 Aligned_cols=97 Identities=10% Similarity=0.145 Sum_probs=66.6
Q ss_pred cCCceEEEE---ccCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC-ccHHHHHHHHHHhcCeeecCCC
Q 039837 49 YADKVAFVE---AVSG----KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNV-AEYGIVALGIMAAGGVFSGANP 120 (544)
Q Consensus 49 ~p~~~a~~~---~~~~----~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~ 120 (544)
.++.++++. +.+| -.+|...+...+.... ...++.++|++....|-. ...+..+++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 456777542 2122 3578888765544433 235788999988877733 33344567788889887765 4
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchHHHh
Q 039837 121 TAHASELKKQVDAADAKLIVSYAPIYEKV 149 (544)
Q Consensus 121 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 149 (544)
...+..+...+++.++..+...+..+..+
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 274 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADL 274 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHH
Confidence 67788999999999999999887766554
No 162
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=51.06 E-value=57 Score=32.16 Aligned_cols=59 Identities=17% Similarity=0.156 Sum_probs=38.0
Q ss_pred HHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCC-----CCHHHHHHHHHhcCceEEEe
Q 039837 79 ALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPT-----AHASELKKQVDAADAKLIVS 141 (544)
Q Consensus 79 ~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 141 (544)
.++..++++||.|++-.+ .+.....++...|+.+++++.+ .+.+.++..+.. +.++|+.
T Consensus 62 ~l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 62 AALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 344457899999877443 4455566777889887776543 356667766653 5666653
No 163
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=49.82 E-value=1.4e+02 Score=24.37 Aligned_cols=47 Identities=17% Similarity=0.118 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeeecch
Q 039837 236 FHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAPIVP 282 (544)
Q Consensus 236 ~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P 282 (544)
.|..|........-..|..++.... ..++++.+.+.+++++++...-
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 6777776666666678888888774 5789999999999998876654
No 164
>PRK06164 acyl-CoA synthetase; Validated
Probab=48.94 E-value=1.6e+02 Score=30.52 Aligned_cols=97 Identities=21% Similarity=0.253 Sum_probs=68.5
Q ss_pred cCCceEEEEccCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC-ccHHHHHHHHHHhcCeeecCCC
Q 039837 49 YADKVAFVEAVSG-------KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNV-AEYGIVALGIMAAGGVFSGANP 120 (544)
Q Consensus 49 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~ 120 (544)
.++.++++.-.+| -.+|...+...+..++..+ ++.++|++...+|-+ ...+..+++.+..|+..+.. +
T Consensus 179 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 254 (540)
T PRK06164 179 DPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-P 254 (540)
T ss_pred CCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-C
Confidence 3567776542222 3578888877766555544 678999998888854 33344577888888887765 4
Q ss_pred CCCHHHHHHHHHhcCceEEEeccchHHHh
Q 039837 121 TAHASELKKQVDAADAKLIVSYAPIYEKV 149 (544)
Q Consensus 121 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 149 (544)
......+...+++.++..++..+..+..+
T Consensus 255 ~~~~~~~~~~l~~~~~t~~~~~p~~l~~l 283 (540)
T PRK06164 255 VFDAARTARALRRHRVTHTFGNDEMLRRI 283 (540)
T ss_pred CCCHHHHHHHHHHhCCeeecCCHHHHHHH
Confidence 56778889999999999998877766544
No 165
>PRK08316 acyl-CoA synthetase; Validated
Probab=47.40 E-value=1.1e+02 Score=31.60 Aligned_cols=84 Identities=6% Similarity=0.075 Sum_probs=60.5
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEE
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA--EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLI 139 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 139 (544)
-.+|++.+...+. ......+++++|++...++-.. .+...+++++..|+..++.+. ...+.+...+++.++.++
T Consensus 189 v~~s~~~l~~~~~---~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 264 (523)
T PRK08316 189 AMLTHRALIAEYV---SCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILDA-PDPELILRTIEAERITSF 264 (523)
T ss_pred EEEecHHHHHHHH---HHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEecC-CCHHHHHHHHHHhCCeEE
Confidence 3588888765543 3444557899999988877432 233446677888999887643 568889999999999999
Q ss_pred EeccchHHHh
Q 039837 140 VSYAPIYEKV 149 (544)
Q Consensus 140 i~~~~~~~~~ 149 (544)
.+.+..+..+
T Consensus 265 ~~~P~~~~~l 274 (523)
T PRK08316 265 FAPPTVWISL 274 (523)
T ss_pred EeCHHHHHHH
Confidence 8877665443
No 166
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=47.24 E-value=1.9e+02 Score=25.39 Aligned_cols=95 Identities=11% Similarity=0.035 Sum_probs=0.0
Q ss_pred cCccEEEEecc-hhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeeecch------HHHHHHhcCCCCC
Q 039837 224 IGQVTTLGLIP-FFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAPIVP------PIILSLVKDPIVD 295 (544)
Q Consensus 224 ~~~~~~~~~~p-~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P------~~~~~l~~~~~~~ 295 (544)
....+++.+.+ =.|..|.......--..|-.++... ...++.+.+.+++++++++...- ..+..+++..+..
T Consensus 83 ~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~ 162 (197)
T TIGR02370 83 VLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEE 162 (197)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHc
Q ss_pred ccCccccccccEEEecCCCCHhHHHHH
Q 039837 296 EFDLSKLQLRAVMTAAAPLAPDLLSSF 322 (544)
Q Consensus 296 ~~~~~~l~~~~v~~~G~~~~~~~~~~~ 322 (544)
...-.- . +++||.+++++..+.+
T Consensus 163 ~~~~~v--~--i~vGG~~~~~~~~~~~ 185 (197)
T TIGR02370 163 GYRDSV--K--FMVGGAPVTQDWADKI 185 (197)
T ss_pred CCCCCC--E--EEEEChhcCHHHHHHh
No 167
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=47.18 E-value=65 Score=33.46 Aligned_cols=89 Identities=11% Similarity=-0.020 Sum_probs=71.7
Q ss_pred eeeccHHHHHHHHHhhccccCC---cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCc
Q 039837 200 GVMLTHRNLVANLCSTLFSVVP---EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEV 275 (544)
Q Consensus 200 gV~~t~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~ 275 (544)
|..+|++.+...+..++..+.. +...+|++...+|-...+. ...+++++.|+.+.... .++..++...++..++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~--~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~ 120 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV--ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKP 120 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCccccccCcccCHHHHHHHHHhcCC
Confidence 7899999998888777766642 3678999999999877554 46688889999988776 4688999999999999
Q ss_pred eeeecchHHHHHHhc
Q 039837 276 TFAPIVPPIILSLVK 290 (544)
Q Consensus 276 t~~~~~P~~~~~l~~ 290 (544)
.++++....+..+..
T Consensus 121 kiif~d~~~~~~i~~ 135 (537)
T KOG1176|consen 121 KLIFVDEDFYDKISE 135 (537)
T ss_pred eEEEEcCchHHHHHH
Confidence 999998877766633
No 168
>PLN02736 long-chain acyl-CoA synthetase
Probab=46.99 E-value=69 Score=34.40 Aligned_cols=88 Identities=11% Similarity=-0.122 Sum_probs=66.7
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|++.+...+..+...+.. ++.+++++...++-..-+ ....++++..|+.++... ...+.++...+++.++.++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l 154 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW--LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAI 154 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEE
Confidence 447899888877666654432 778889988877766543 356788888999998765 5688999999999999999
Q ss_pred ecchHHHHHHhc
Q 039837 279 PIVPPIILSLVK 290 (544)
Q Consensus 279 ~~~P~~~~~l~~ 290 (544)
++.+..+..+.+
T Consensus 155 ~~~~~~~~~~~~ 166 (651)
T PLN02736 155 FCVPQTLNTLLS 166 (651)
T ss_pred EECHHHHHHHHH
Confidence 998877665543
No 169
>PRK07788 acyl-CoA synthetase; Validated
Probab=46.80 E-value=79 Score=32.98 Aligned_cols=85 Identities=12% Similarity=0.011 Sum_probs=62.9
Q ss_pred eccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|++.+...+..+...+.. ++..++++...++-.- .+...+++++..|+.++..++ ....++...+++.+++.++
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 151 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR--GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALV 151 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEE
Confidence 46777777766555544421 5677888887776654 344677899999999998764 5788899999999999998
Q ss_pred cchHHHHHH
Q 039837 280 IVPPIILSL 288 (544)
Q Consensus 280 ~~P~~~~~l 288 (544)
..+.....+
T Consensus 152 ~~~~~~~~~ 160 (549)
T PRK07788 152 YDDEFTDLL 160 (549)
T ss_pred ECchhHHHH
Confidence 887665544
No 170
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=45.35 E-value=80 Score=31.09 Aligned_cols=57 Identities=14% Similarity=0.163 Sum_probs=37.6
Q ss_pred HHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCC-----CCHHHHHHHHHhcCceEEEe
Q 039837 81 RSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPT-----AHASELKKQVDAADAKLIVS 141 (544)
Q Consensus 81 ~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 141 (544)
...++++||.|++-.+. +.....++...|+.++.++.+ .+.+.++..+.. +.++|+.
T Consensus 64 ~~~~~~~Gd~Viv~~~t---~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 64 LLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred HHhCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 33467899998775544 444456677889887776542 457778777754 5666663
No 171
>PRK06188 acyl-CoA synthetase; Validated
Probab=45.31 E-value=2.3e+02 Score=29.18 Aligned_cols=83 Identities=10% Similarity=0.025 Sum_probs=62.0
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEec
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSY 142 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 142 (544)
.+|+..+...+.... ...++..+|++...++-+..+...+++.+..|+..+..+. ..+..+...+++.++.++...
T Consensus 187 ~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~ 262 (524)
T PRK06188 187 MGTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK-FDPAEVLRAIEEQRITATFLV 262 (524)
T ss_pred eeehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHhCCEEEEeh
Confidence 478888776655333 3457889999998888665555566777888988887654 567889999999999999887
Q ss_pred cchHHHh
Q 039837 143 APIYEKV 149 (544)
Q Consensus 143 ~~~~~~~ 149 (544)
+.....+
T Consensus 263 P~~l~~l 269 (524)
T PRK06188 263 PTMIYAL 269 (524)
T ss_pred HHHHHHH
Confidence 7665544
No 172
>PRK07638 acyl-CoA synthetase; Validated
Probab=45.26 E-value=1.3e+02 Score=30.74 Aligned_cols=85 Identities=6% Similarity=0.049 Sum_probs=61.0
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc-cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA-EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
-.+|.+.+...+...+ ...+++++|++....+-.. .++...+..+..|+..+.. +..++..+...+++.+++++.
T Consensus 161 v~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 3578888766554433 3447889999887766433 2344566677889888755 567788999999999999999
Q ss_pred eccchHHHhh
Q 039837 141 SYAPIYEKVK 150 (544)
Q Consensus 141 ~~~~~~~~~~ 150 (544)
..+..+..+.
T Consensus 237 ~~P~~~~~l~ 246 (487)
T PRK07638 237 TVPTMLESLY 246 (487)
T ss_pred eCcHHHHHHH
Confidence 8887766554
No 173
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=43.96 E-value=48 Score=25.96 Aligned_cols=41 Identities=17% Similarity=0.179 Sum_probs=32.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 74 RGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 74 ~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
..+...+...|+.+++.|.++|.++..+..+...+...|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45566677888889999999999888777777777788874
No 174
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=43.84 E-value=92 Score=21.44 Aligned_cols=34 Identities=18% Similarity=0.399 Sum_probs=25.1
Q ss_pred ceEEEecccccccccCChhhhhcccCCCCeeecCceEEEcCCCcEEEEe
Q 039837 388 GELCVRSQCVMQGYYNNEEETARTIDKNGWLHTGDIGYIDDDGDIFIVD 436 (544)
Q Consensus 388 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~G 436 (544)
|.+|++-..- ..|-|+..||...+...+.+++.+
T Consensus 25 G~vWlT~~g~---------------~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 25 GRVWLTREGD---------------PDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred ccEEEECCCC---------------CCCEEECCCCEEEeCCCCEEEEEe
Confidence 8999984331 146689999999997777777655
No 175
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=43.05 E-value=91 Score=32.74 Aligned_cols=85 Identities=13% Similarity=0.013 Sum_probs=64.7
Q ss_pred eccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|++.+...+..+...+.. ++..++++...+|-... +...+++++..|+..+..+ ......+...+.+.++..++
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 134 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ--HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAI 134 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEE
Confidence 47888888877666655432 56788888888777654 3467788999999998775 46788999999999999998
Q ss_pred cchHHHHHH
Q 039837 280 IVPPIILSL 288 (544)
Q Consensus 280 ~~P~~~~~l 288 (544)
+.......+
T Consensus 135 ~~~~~~~~~ 143 (573)
T PRK05605 135 VWDKVAPTV 143 (573)
T ss_pred echhhHHHH
Confidence 877655443
No 176
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=43.00 E-value=2.3e+02 Score=29.14 Aligned_cols=98 Identities=17% Similarity=0.149 Sum_probs=66.5
Q ss_pred cCCceEEEEccCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--HHHHHHHHHHhcCeeecCC
Q 039837 49 YADKVAFVEAVSG-------KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAE--YGIVALGIMAAGGVFSGAN 119 (544)
Q Consensus 49 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~ 119 (544)
.++.++++.-.+| -.+|+..+...+.... ....+++++|++...++-... +...+++.+..|+..+..+
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 3566776432122 3578888876554321 233488999998877775433 3344566778898888777
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchHHH
Q 039837 120 PTAHASELKKQVDAADAKLIVSYAPIYEK 148 (544)
Q Consensus 120 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 148 (544)
...+...+...+++.++.++...+..+..
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 265 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLYAA 265 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHHHH
Confidence 66778899999999999999987765443
No 177
>PRK08308 acyl-CoA synthetase; Validated
Probab=42.98 E-value=3e+02 Score=27.28 Aligned_cols=84 Identities=10% Similarity=0.117 Sum_probs=60.9
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEE
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA--EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLI 139 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 139 (544)
-.+|++.+...+..+... .++..+|++...++-.- .++..+++.+..|+..+..+. .++..+...+++.++.++
T Consensus 119 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN-KNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC-CCHHHHHHHHHHhCCeEE
Confidence 358999988766655543 35678898877777543 334567888899998776654 567788888999999998
Q ss_pred EeccchHHHh
Q 039837 140 VSYAPIYEKV 149 (544)
Q Consensus 140 i~~~~~~~~~ 149 (544)
+..+..+..+
T Consensus 195 ~~~P~~~~~l 204 (414)
T PRK08308 195 YAVPLMLHIL 204 (414)
T ss_pred EcCHHHHHHH
Confidence 8877766554
No 178
>PLN03102 acyl-activating enzyme; Provisional
Probab=42.89 E-value=86 Score=33.06 Aligned_cols=82 Identities=11% Similarity=0.052 Sum_probs=62.8
Q ss_pred eccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|.+.+...+..+...+.. ++..++++...+|-.- .+...+++++..|+.++..+ ..+..++...++..+++.++
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii 116 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILF 116 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEE
Confidence 57888888777666654432 6788899988888655 34456788999999988876 46788999999999999998
Q ss_pred cchHHH
Q 039837 280 IVPPII 285 (544)
Q Consensus 280 ~~P~~~ 285 (544)
+.+...
T Consensus 117 ~~~~~~ 122 (579)
T PLN03102 117 VDRSFE 122 (579)
T ss_pred EChhhH
Confidence 766544
No 179
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=42.38 E-value=12 Score=17.54 Aligned_cols=9 Identities=33% Similarity=0.586 Sum_probs=6.8
Q ss_pred cccCccccc
Q 039837 334 AYGLTEHSC 342 (544)
Q Consensus 334 ~yG~tE~~~ 342 (544)
+||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 589998764
No 180
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=41.88 E-value=1.1e+02 Score=25.71 Aligned_cols=63 Identities=16% Similarity=0.142 Sum_probs=36.8
Q ss_pred hHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCC-CCCHHHHHHHHHhcccC-CCceeEEEEe
Q 039837 451 PAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNA-KESEDDIMDFVASNVAT-YKKVRVLHFV 518 (544)
Q Consensus 451 ~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~l~~~l~~-~~~p~~~~~~ 518 (544)
...|.+.+.+.|+|.++.++...+. .++++. +..+. ..-.+++++.+.+.+.. ...-..+++.
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVtg~~----A~Vgv~-~~~~~~~~~~~~iK~~Va~~Vk~~dp~~~~VyVs 120 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVITGNY----AYVGVD-LTNGLEGSVTDELKEKVAETVKSTDNRIANVYVS 120 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEECCE----EEEEEE-cCCCcchhhHHHHHHHHHHHHHhhCCCcceEEEE
Confidence 3568888899999999999977654 334432 22222 22245666666655544 3333334443
No 181
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=41.43 E-value=90 Score=33.50 Aligned_cols=80 Identities=10% Similarity=0.044 Sum_probs=63.2
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|.+.|...+..+...+.. ++.++|++...+|-.--+ ...++++...|+..+... .+...++...+++.+++++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~l 168 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP--LIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLI 168 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEE
Confidence 568888887777666655432 788999999999887654 356788889999888765 5789999999999999999
Q ss_pred ecch
Q 039837 279 PIVP 282 (544)
Q Consensus 279 ~~~P 282 (544)
++..
T Consensus 169 i~~~ 172 (647)
T PTZ00237 169 ITTN 172 (647)
T ss_pred EEcc
Confidence 8754
No 182
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=41.23 E-value=2.4e+02 Score=30.67 Aligned_cols=94 Identities=7% Similarity=0.056 Sum_probs=62.5
Q ss_pred cCCceEEE-Ec--cCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CccHHHHHHHHHHhcCeeecCC
Q 039837 49 YADKVAFV-EA--VSG----KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPN--VAEYGIVALGIMAAGGVFSGAN 119 (544)
Q Consensus 49 ~p~~~a~~-~~--~~~----~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~ 119 (544)
.++.+|++ +. .+| -.+|++.+...+..+.. ..++.++|++...+|- ...+...+++.+..|+..+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 45666654 32 112 35899888776665543 2478899999888774 2344456778888999888666
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccch
Q 039837 120 PTAHASELKKQVDAADAKLIVSYAPI 145 (544)
Q Consensus 120 ~~~~~~~l~~~l~~~~~~~ii~~~~~ 145 (544)
.......+...+.+.++..+...+..
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~ 465 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTF 465 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHH
Confidence 44455566777888888877765443
No 183
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=40.91 E-value=2e+02 Score=25.61 Aligned_cols=92 Identities=11% Similarity=0.090 Sum_probs=59.0
Q ss_pred CccEEEEecc-hhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeeecchHH------HHHHhcCCCCCc
Q 039837 225 GQVTTLGLIP-FFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAPIVPPI------ILSLVKDPIVDE 296 (544)
Q Consensus 225 ~~~~~~~~~p-~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~------~~~l~~~~~~~~ 296 (544)
.+.+++.+.+ =.|..|.......--..|-.++... ...+..+.+.+.+++++++...-.+ +..+++......
T Consensus 88 ~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~ 167 (213)
T cd02069 88 KGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRG 167 (213)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcC
Confidence 3445555555 4777787565566666888888876 4678999999999999887655332 122222111111
Q ss_pred cCccccccccEEEecCCCCHhHHHHH
Q 039837 297 FDLSKLQLRAVMTAAAPLAPDLLSSF 322 (544)
Q Consensus 297 ~~~~~l~~~~v~~~G~~~~~~~~~~~ 322 (544)
. .+ . ++.||.+++.+..+..
T Consensus 168 ~---~~-~--i~vGG~~~~~~~~~~~ 187 (213)
T cd02069 168 I---KI-P--LLIGGAATSRKHTAVK 187 (213)
T ss_pred C---CC-e--EEEEChhcCHHHHhhh
Confidence 1 11 2 7899999998887653
No 184
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.88 E-value=2.5e+02 Score=29.43 Aligned_cols=86 Identities=15% Similarity=0.190 Sum_probs=59.0
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-HHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAE-YGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
-.+|+..+...+..+. .....++.++|++...+|-... .....++.+..|+..+...+..+++.+...+.+.++.++.
T Consensus 199 v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 199 VVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred EEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 3578888765443322 1223578899999888774422 2334567777888877666677888999999999999998
Q ss_pred eccchHHH
Q 039837 141 SYAPIYEK 148 (544)
Q Consensus 141 ~~~~~~~~ 148 (544)
..+.....
T Consensus 278 ~~P~~~~~ 285 (576)
T PRK05620 278 GVPTLWIQ 285 (576)
T ss_pred ecCHHHHH
Confidence 76665443
No 185
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=40.79 E-value=1.4e+02 Score=28.23 Aligned_cols=61 Identities=20% Similarity=0.176 Sum_probs=41.1
Q ss_pred HcC-CCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEecc
Q 039837 82 SLG-LRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYA 143 (544)
Q Consensus 82 ~~G-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 143 (544)
+.| +++|+.|.=-.. +---+..-+.|...|+.++.+=|.....+.+.+++..++.++++..
T Consensus 55 ~~G~l~pG~tIVE~TS-GNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTIVEATS-GNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEEEEcCC-ChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 345 899996544333 3344444455557787666555544455678999999999999886
No 186
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=40.75 E-value=1.2e+02 Score=31.74 Aligned_cols=86 Identities=6% Similarity=-0.051 Sum_probs=65.1
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|.+.+...+..+...+.. +..+++++...+|-...+ ...+++++..|+..+..+ .....++...+++.+++.+
T Consensus 45 ~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l 122 (542)
T PRK06155 45 TRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLL 122 (542)
T ss_pred ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEE
Confidence 357888887777666654432 667788888777766543 467888999999999876 4678899999999999999
Q ss_pred ecchHHHHHH
Q 039837 279 PIVPPIILSL 288 (544)
Q Consensus 279 ~~~P~~~~~l 288 (544)
++.......+
T Consensus 123 ~~~~~~~~~~ 132 (542)
T PRK06155 123 VVEAALLAAL 132 (542)
T ss_pred EEChhhHHHH
Confidence 9887766554
No 187
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=40.62 E-value=64 Score=24.60 Aligned_cols=51 Identities=12% Similarity=-0.037 Sum_probs=36.5
Q ss_pred eeHHHHHHH----HHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 64 YTYAQVARD----TRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 64 ~Ty~el~~~----~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
+.+.++.+. ...+...+...++..++.|.++|.++..+..+...+...|..
T Consensus 38 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 38 IPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred echHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 455555432 235666676677878889999999988877777778888874
No 188
>PLN02246 4-coumarate--CoA ligase
Probab=40.42 E-value=98 Score=32.17 Aligned_cols=85 Identities=7% Similarity=-0.065 Sum_probs=62.2
Q ss_pred eeeccHHHHHHHHHhhccccC-CcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCcee
Q 039837 200 GVMLTHRNLVANLCSTLFSVV-PEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTF 277 (544)
Q Consensus 200 gV~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~ 277 (544)
+..+|++.+...+..+...+. .+..+++++...++-.. .+...+++++..|+..+..++ ....++...++..++..
T Consensus 48 ~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (537)
T PLN02246 48 GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP--EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKL 125 (537)
T ss_pred CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcE
Confidence 346899988777666655442 26778888887776654 344667888999999998764 57788888999999998
Q ss_pred eecchHHHH
Q 039837 278 APIVPPIIL 286 (544)
Q Consensus 278 ~~~~P~~~~ 286 (544)
++.......
T Consensus 126 li~~~~~~~ 134 (537)
T PLN02246 126 IITQSCYVD 134 (537)
T ss_pred EEEccchHH
Confidence 877665444
No 189
>PLN02654 acetate-CoA ligase
Probab=40.04 E-value=1e+02 Score=33.28 Aligned_cols=81 Identities=10% Similarity=0.073 Sum_probs=63.0
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|.+.|...+..+...+.. +..++|++...+|-..- +...+++++..|+..+... .+....+...+++.++.++
T Consensus 119 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e--~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~l 196 (666)
T PLN02654 119 ASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLME--LPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVV 196 (666)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEE
Confidence 467888887777666654432 77899999988888664 3467788999999988775 5788999999999999999
Q ss_pred ecchH
Q 039837 279 PIVPP 283 (544)
Q Consensus 279 ~~~P~ 283 (544)
++...
T Consensus 197 i~~~~ 201 (666)
T PLN02654 197 ITCNA 201 (666)
T ss_pred EEcCc
Confidence 87654
No 190
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=39.75 E-value=2.6e+02 Score=24.55 Aligned_cols=90 Identities=14% Similarity=0.183 Sum_probs=53.6
Q ss_pred ccEEEEecc-hhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeeecchHH------HHHHhcCCCCCcc
Q 039837 226 QVTTLGLIP-FFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAPIVPPI------ILSLVKDPIVDEF 297 (544)
Q Consensus 226 ~~~~~~~~p-~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~------~~~l~~~~~~~~~ 297 (544)
..+++...| =.|..|.......--..|..++... ...++.+.+.+.+.+++++...-++ +..+++..+....
T Consensus 83 ~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~ 162 (201)
T cd02070 83 GKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGL 162 (201)
T ss_pred CeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCC
Confidence 345555555 4777777555455556788877655 4678999999999999887654422 2222221111110
Q ss_pred CccccccccEEEecCCCCHhHH
Q 039837 298 DLSKLQLRAVMTAAAPLAPDLL 319 (544)
Q Consensus 298 ~~~~l~~~~v~~~G~~~~~~~~ 319 (544)
... -. ++.||..++.+..
T Consensus 163 -~~~-~~--i~vGG~~~~~~~~ 180 (201)
T cd02070 163 -RDK-VK--VMVGGAPVNQEFA 180 (201)
T ss_pred -CcC-Ce--EEEECCcCCHHHH
Confidence 001 12 7899988887643
No 191
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=39.37 E-value=2.8e+02 Score=28.84 Aligned_cols=99 Identities=19% Similarity=0.266 Sum_probs=71.1
Q ss_pred cCCceEEEE-c--cC----CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC--CCccHHHHHHHHHHhcCeeecCC
Q 039837 49 YADKVAFVE-A--VS----GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLP--NVAEYGIVALGIMAAGGVFSGAN 119 (544)
Q Consensus 49 ~p~~~a~~~-~--~~----~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~--n~~~~~~~~lA~~~~G~~~v~l~ 119 (544)
.|+.+|++. . .+ +-.+|++.+...+..+...+... +++.|++...+| +..-+...+++.+..|+..+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 467778653 2 11 24589999999877666666432 678888777777 33566667888889999988777
Q ss_pred C-CCCHHHHHHHHHhcCceEEEeccchHHH
Q 039837 120 P-TAHASELKKQVDAADAKLIVSYAPIYEK 148 (544)
Q Consensus 120 ~-~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 148 (544)
+ .+.++.+...+...++..+..-+.....
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ 277 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLRE 277 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHH
Confidence 5 6888888999988887777766665544
No 192
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=38.98 E-value=49 Score=23.80 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=33.3
Q ss_pred HHHHHHc-CCCCCCEEEEEcCCCccHHHHHHHHHHhcCee
Q 039837 77 AKALRSL-GLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF 115 (544)
Q Consensus 77 a~~L~~~-Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 115 (544)
..+|++. ||+.|+.++.+.....+.+..+=|.+++.-+-
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~ 42 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVE 42 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhcee
Confidence 4567664 99999999999999999999999999987653
No 193
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=38.80 E-value=48 Score=23.68 Aligned_cols=68 Identities=10% Similarity=0.155 Sum_probs=52.8
Q ss_pred ceeeHHHHHHHHHHHHH---HHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceE
Q 039837 62 KAYTYAQVARDTRGFAK---ALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKL 138 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~---~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 138 (544)
...||++|.+--+.++. .|....+...|-|+|+.=++..+ +-++.++...+.+++++.++..++++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 45799999887766554 56666788999999998877653 34577888899999999999888876
Q ss_pred EE
Q 039837 139 IV 140 (544)
Q Consensus 139 ii 140 (544)
--
T Consensus 77 n~ 78 (88)
T COG4009 77 NR 78 (88)
T ss_pred cc
Confidence 43
No 194
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=38.57 E-value=2.9e+02 Score=29.24 Aligned_cols=83 Identities=17% Similarity=0.147 Sum_probs=58.5
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEE
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA--EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLI 139 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 139 (544)
-.+|...+...+..+... .++.++|++...+|-.. .++..+++.+..|+..+. .+......+...+.+.++..+
T Consensus 217 V~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~ 292 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RRKFSASRFWDDVRRYRATAF 292 (600)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cCCCCHHHHHHHHHHhcceEE
Confidence 458999888777665544 56889999988887543 333445566677777665 456777788888899999888
Q ss_pred EeccchHHH
Q 039837 140 VSYAPIYEK 148 (544)
Q Consensus 140 i~~~~~~~~ 148 (544)
...+.....
T Consensus 293 ~~~p~l~~~ 301 (600)
T PRK08279 293 QYIGELCRY 301 (600)
T ss_pred eehHHHHHH
Confidence 765554443
No 195
>PRK07514 malonyl-CoA synthase; Validated
Probab=38.57 E-value=1.3e+02 Score=30.95 Aligned_cols=86 Identities=15% Similarity=0.018 Sum_probs=63.9
Q ss_pred eeeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCcee
Q 039837 200 GVMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTF 277 (544)
Q Consensus 200 gV~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~ 277 (544)
+..+|...+...+..+...+.. +...++++...++-.. .+...+++++..|+..+..++ .....+...++..+++.
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~--e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 103 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP--EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPAL 103 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcE
Confidence 4568888887776666554432 6778888887777664 444677889999999987764 57788889999999999
Q ss_pred eecchHHHHH
Q 039837 278 APIVPPIILS 287 (544)
Q Consensus 278 ~~~~P~~~~~ 287 (544)
++..+.....
T Consensus 104 ii~~~~~~~~ 113 (504)
T PRK07514 104 VVCDPANFAW 113 (504)
T ss_pred EEEccchhHH
Confidence 9887765544
No 196
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=38.53 E-value=57 Score=23.13 Aligned_cols=51 Identities=14% Similarity=0.316 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCceeeecchHHHHHHhcCCCCCccCccccccccEEEecCCCCHhHHHHHHhhcCCCeE
Q 039837 264 RAFLDALITHEVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAPLAPDLLSSFEKKFPGVQV 331 (544)
Q Consensus 264 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~~~~~~~~~~~~~~~~~~i 331 (544)
..+++.+.+++++++. +..+..++.+ .+.+.......+.+.+.+.||+..+
T Consensus 19 ~~i~~~l~~~~v~ii~---------------K~~nANtit~--yl~~~~k~~~r~~~~Le~~~p~a~i 69 (71)
T cd04910 19 LEILELLQRFKVSIIA---------------KDTNANTITH--YLAGSLKTIKRLTEDLENRFPNAEI 69 (71)
T ss_pred HHHHHHHHHcCCeEEE---------------EecCCCeEEE--EEEcCHHHHHHHHHHHHHhCccCcc
Confidence 5688888999999885 2334455556 7777777778889999999987765
No 197
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=38.21 E-value=35 Score=24.04 Aligned_cols=19 Identities=32% Similarity=0.483 Sum_probs=15.2
Q ss_pred HHHHHHHcCCCCCCEEEEE
Q 039837 76 FAKALRSLGLRKGQVVIVV 94 (544)
Q Consensus 76 la~~L~~~Gi~~gd~V~i~ 94 (544)
+-..|+++|++.||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4456788899999999775
No 198
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=38.10 E-value=1.7e+02 Score=31.99 Aligned_cols=88 Identities=11% Similarity=0.027 Sum_probs=65.7
Q ss_pred eeccHHHHHHHHHhhccccCC----cccCc-----------cEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHH
Q 039837 201 VMLTHRNLVANLCSTLFSVVP----EMIGQ-----------VTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELR 264 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~----~~~~~-----------~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~ 264 (544)
..+|.+.+...+..+...+.. ++.++ +++...++-.. .+....++++..|+..+... .+.++
T Consensus 90 ~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~--ew~~~~lA~~~~Gav~Vpl~~~~~~~ 167 (746)
T PTZ00342 90 NYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI--NWLVADLACMLSGVTTLVMHSKFSID 167 (746)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH--HHHHHHHHHHHcCCeEEEecCCCCHH
Confidence 467888888877776665542 55665 66766666543 34466788889999888765 57899
Q ss_pred HHHHHHHHcCceeeecchHHHHHHhc
Q 039837 265 AFLDALITHEVTFAPIVPPIILSLVK 290 (544)
Q Consensus 265 ~~~~~i~~~~~t~~~~~P~~~~~l~~ 290 (544)
++...+++.++.++++.+..+..+.+
T Consensus 168 el~~il~~s~~~~lv~~~~~~~~l~~ 193 (746)
T PTZ00342 168 VIVDILNETKLEWLCLDLDLVEGLLE 193 (746)
T ss_pred HHHHHHhcCCCCEEEEcHHHHHHHHH
Confidence 99999999999999988877777754
No 199
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=38.09 E-value=55 Score=28.54 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=29.5
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLP 96 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~ 96 (544)
.-+||.++++.+..+|..+.+.|.+|.-.|++.-.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRG 39 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIARG 39 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCC
Confidence 45899999999999999999999988777666543
No 200
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=38.08 E-value=97 Score=32.31 Aligned_cols=85 Identities=8% Similarity=-0.051 Sum_probs=62.3
Q ss_pred eeeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCcee
Q 039837 200 GVMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTF 277 (544)
Q Consensus 200 gV~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~ 277 (544)
+..+|++.+...+..+...+.. +..+++++...++-...+ ...+++++..|+..+..+. ....++...+++.++..
T Consensus 53 ~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 130 (546)
T PLN02330 53 GKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY--GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKL 130 (546)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeE
Confidence 3568999988877666654432 667788888777766543 3567889999999887764 46788889999999988
Q ss_pred eecchHHHH
Q 039837 278 APIVPPIIL 286 (544)
Q Consensus 278 ~~~~P~~~~ 286 (544)
+++.+..+.
T Consensus 131 ~i~~~~~~~ 139 (546)
T PLN02330 131 IVTNDTNYG 139 (546)
T ss_pred EEEccchhh
Confidence 877665444
No 201
>PLN02565 cysteine synthase
Probab=37.98 E-value=2.2e+02 Score=27.41 Aligned_cols=90 Identities=14% Similarity=0.052 Sum_probs=55.1
Q ss_pred ceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHH
Q 039837 52 KVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGL-RKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQ 130 (544)
Q Consensus 52 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 130 (544)
++.+.....+-+-||++= -+..+-..+.+.|. .+|....+....+-.-+.+-+++...|..++.+-|...+......
T Consensus 31 ~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 108 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDR--IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRII 108 (322)
T ss_pred eEEEEecccCCccchHHH--HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHH
Confidence 455443322334455542 22222233344554 778554455555555566667777899987766666667778889
Q ss_pred HHhcCceEEEecc
Q 039837 131 VDAADAKLIVSYA 143 (544)
Q Consensus 131 l~~~~~~~ii~~~ 143 (544)
++..+++++++++
T Consensus 109 i~~~GA~V~~~~~ 121 (322)
T PLN02565 109 LLAFGAELVLTDP 121 (322)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999998865
No 202
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=37.79 E-value=1.2e+02 Score=31.25 Aligned_cols=77 Identities=17% Similarity=0.107 Sum_probs=59.3
Q ss_pred eeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcC--CCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 64 YTYAQVARDTRGFAK-ALRSLGLRKGQVVIVVLP--NVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 64 ~Ty~el~~~~~~la~-~L~~~Gi~~gd~V~i~~~--n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
+|+.... +.|. ...-.|+++.|+|-+.+| ++...++-+-+|+..|+++| |...+|+...=.-+.+.++.++-
T Consensus 262 ith~r~~----~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~Q 336 (649)
T KOG1179|consen 262 ITHLRYL----QGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQ 336 (649)
T ss_pred HHHHHHH----HHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeee
Confidence 5555444 4444 334458999999999998 78888888999999999977 78899998888888888888876
Q ss_pred eccch
Q 039837 141 SYAPI 145 (544)
Q Consensus 141 ~~~~~ 145 (544)
.-.+.
T Consensus 337 YIGEl 341 (649)
T KOG1179|consen 337 YIGEL 341 (649)
T ss_pred hHHHH
Confidence 54443
No 203
>PRK13383 acyl-CoA synthetase; Provisional
Probab=36.92 E-value=1.3e+02 Score=31.00 Aligned_cols=85 Identities=15% Similarity=0.018 Sum_probs=62.7
Q ss_pred eccHHHHHHHHHhhccccC-CcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVV-PEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|...+...+..+...+. .+..+++++...++-.- .+...+++++..|+..+..++ ...+.+...+++.++..++
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~--~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 137 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGR--GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVV 137 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEE
Confidence 4777888777666655442 25678888887776554 333567889999999998764 5788899999999999999
Q ss_pred cchHHHHHH
Q 039837 280 IVPPIILSL 288 (544)
Q Consensus 280 ~~P~~~~~l 288 (544)
..+.....+
T Consensus 138 ~~~~~~~~~ 146 (516)
T PRK13383 138 ADNEFAERI 146 (516)
T ss_pred EchhHHHHH
Confidence 877665544
No 204
>PRK06839 acyl-CoA synthetase; Validated
Probab=36.74 E-value=1.8e+02 Score=29.63 Aligned_cols=87 Identities=9% Similarity=-0.095 Sum_probs=65.8
Q ss_pred eeeccHHHHHHHHHhhccccC--CcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCce
Q 039837 200 GVMLTHRNLVANLCSTLFSVV--PEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVT 276 (544)
Q Consensus 200 gV~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t 276 (544)
+..+|++.+...+..+...+. .+..+++++...++-... +...+++++..|+..+..+. .++..+...+++.+++
T Consensus 25 ~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~ 102 (496)
T PRK06839 25 EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE--YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTT 102 (496)
T ss_pred CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCce
Confidence 456788888887777766552 266788888877777654 44677889999999998764 5788888889999999
Q ss_pred eeecchHHHHHH
Q 039837 277 FAPIVPPIILSL 288 (544)
Q Consensus 277 ~~~~~P~~~~~l 288 (544)
.++..+.....+
T Consensus 103 ~i~~~~~~~~~~ 114 (496)
T PRK06839 103 VLFVEKTFQNMA 114 (496)
T ss_pred EEEEcHHHHHHH
Confidence 998887765443
No 205
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=36.67 E-value=1.4e+02 Score=31.29 Aligned_cols=84 Identities=13% Similarity=0.025 Sum_probs=63.1
Q ss_pred eeccHHHHHHHHHhhccccC--CcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCcee
Q 039837 201 VMLTHRNLVANLCSTLFSVV--PEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTF 277 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~ 277 (544)
..+|++.+...+..+...+. .+...++++...+|-... +...+++++..|+..+..+ .+...++...+++.+++.
T Consensus 49 ~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ 126 (560)
T PRK08751 49 KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ--YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASV 126 (560)
T ss_pred ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeE
Confidence 45788888877766665442 277888888888777654 3356788999999999765 467788889999999999
Q ss_pred eecchHHHH
Q 039837 278 APIVPPIIL 286 (544)
Q Consensus 278 ~~~~P~~~~ 286 (544)
++.......
T Consensus 127 vi~~~~~~~ 135 (560)
T PRK08751 127 LVVIDNFGT 135 (560)
T ss_pred EEEcchhHH
Confidence 887765543
No 206
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=36.62 E-value=30 Score=24.32 Aligned_cols=31 Identities=29% Similarity=0.373 Sum_probs=18.3
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIV 93 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i 93 (544)
.+.|-+-.-+...+-..|+++|++.||.|-|
T Consensus 32 ~~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 32 SLRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp GHHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 3444444444555666788889999999976
No 207
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=36.56 E-value=1.3e+02 Score=20.12 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=30.0
Q ss_pred HHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHh
Q 039837 452 AELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVAS 504 (544)
Q Consensus 452 ~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 504 (544)
..|++.|.+.|+|..+.+-... . .+.+...+.. .+.+++.+.+.+
T Consensus 14 ~~v~~~l~~~~GV~~v~vd~~~-~------~v~v~~~~~~-~~~~~i~~~i~~ 58 (62)
T PF00403_consen 14 KKVEKALSKLPGVKSVKVDLET-K------TVTVTYDPDK-TSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHHTSTTEEEEEEETTT-T------EEEEEESTTT-SCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEEECCC-C------EEEEEEecCC-CCHHHHHHHHHH
Confidence 5699999999999877664221 1 2334444443 677888888765
No 208
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=36.29 E-value=80 Score=27.12 Aligned_cols=53 Identities=25% Similarity=0.241 Sum_probs=34.4
Q ss_pred ChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHHHHHHHHhcccC
Q 039837 450 APAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDDIMDFVASNVAT 508 (544)
Q Consensus 450 ~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~ 508 (544)
....|++.+.+.++|.++.|+...+. ..+++- +... ....+++.+.+++.+..
T Consensus 76 ~a~~i~~~v~~~~~V~~A~vvv~~~~----a~Vav~-~~~~-~~~~~~i~~~V~~~v~~ 128 (177)
T PF09580_consen 76 LADRIANRVKKVPGVEDATVVVTDDN----AYVAVD-LDFN-RFNTKKIKKKVEKAVKS 128 (177)
T ss_pred HHHHHHHHHhcCCCceEEEEEEECCE----EEEEEE-eccc-ccchhHHHHHHHHHHHH
Confidence 35678999999999999999987554 344443 3322 34455666666655443
No 209
>PRK09274 peptide synthase; Provisional
Probab=36.24 E-value=1.2e+02 Score=31.58 Aligned_cols=81 Identities=9% Similarity=0.019 Sum_probs=60.6
Q ss_pred eeeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCcee
Q 039837 200 GVMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTF 277 (544)
Q Consensus 200 gV~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~ 277 (544)
...+|.+.+...+..+...+.. +...++++...++-... +...+++++..|+..+..++ ....++...+++.++..
T Consensus 39 ~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 116 (552)
T PRK09274 39 YDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLE--FFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDA 116 (552)
T ss_pred cCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHH--HHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCE
Confidence 3368999888777666554432 67888999888776553 44677889999999988764 56778888889999988
Q ss_pred eecch
Q 039837 278 APIVP 282 (544)
Q Consensus 278 ~~~~P 282 (544)
++..+
T Consensus 117 ~i~~~ 121 (552)
T PRK09274 117 FIGIP 121 (552)
T ss_pred EEecc
Confidence 87754
No 210
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=36.15 E-value=4.1e+02 Score=27.59 Aligned_cols=83 Identities=11% Similarity=0.154 Sum_probs=59.6
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA--EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
.+|+..+...+.... ...+++++|++....+-+. .++..+++.+..|+..+..+ ....+.+...+++.++..++
T Consensus 216 ~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~vt~~~ 291 (547)
T PRK13295 216 MHTANTLMANIVPYA---ERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD-IWDPARAAELIRTEGVTFTM 291 (547)
T ss_pred EeccHHHHHHHHHHH---HHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC-CCCHHHHHHHHHHcCCcEEE
Confidence 578888766555433 3457889999988877542 24455777888999887654 56788899999999999888
Q ss_pred eccchHHHh
Q 039837 141 SYAPIYEKV 149 (544)
Q Consensus 141 ~~~~~~~~~ 149 (544)
........+
T Consensus 292 ~~p~~~~~l 300 (547)
T PRK13295 292 ASTPFLTDL 300 (547)
T ss_pred ecHHHHHHH
Confidence 766655443
No 211
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=36.10 E-value=59 Score=30.52 Aligned_cols=52 Identities=12% Similarity=0.142 Sum_probs=42.5
Q ss_pred eeeHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 63 AYTYAQVAR-----DTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 63 ~~Ty~el~~-----~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
.+.|.++.. ....+...|.+.|+.+++.|.++|.++..+..+++++-..|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 467777763 2466777788889999999999999999999999999888985
No 212
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=35.88 E-value=61 Score=31.11 Aligned_cols=53 Identities=15% Similarity=0.207 Sum_probs=42.3
Q ss_pred eeeHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCee
Q 039837 63 AYTYAQVARD------TRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF 115 (544)
Q Consensus 63 ~~Ty~el~~~------~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 115 (544)
.+.|.++... ...+...+.+.|+.+++.|.++|..+.....+++++-.+|..-
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~ 296 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTD 296 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCC
Confidence 4567666432 4667777888899999999999999999988899998899753
No 213
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=35.53 E-value=1.6e+02 Score=31.72 Aligned_cols=86 Identities=13% Similarity=-0.132 Sum_probs=65.2
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|++.+...+..+...+.. ++.++|++...++-..- +....++++..|+..+... .....++...+++.+++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v 153 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIA 153 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEE
Confidence 457899888877776665532 67888988888776653 3456788999999988765 4678889999999999999
Q ss_pred ecchHHHHHH
Q 039837 279 PIVPPIILSL 288 (544)
Q Consensus 279 ~~~P~~~~~l 288 (544)
++....+..+
T Consensus 154 ~~~~~~~~~~ 163 (660)
T PLN02861 154 FVQESKISSI 163 (660)
T ss_pred EECHHHHHHH
Confidence 8876655544
No 214
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=35.52 E-value=1.1e+02 Score=32.52 Aligned_cols=80 Identities=11% Similarity=-0.054 Sum_probs=61.2
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
-.+|.+.|...+..+...+.. ++.++|++...+|-.-- +...+++++..|+..+... .+...++...++..++..+
T Consensus 82 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e--~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~l 159 (628)
T TIGR02316 82 RTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAE--AVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLI 159 (628)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEE
Confidence 357888887776666554432 78899999988888654 3467788999999988765 5678899999999999988
Q ss_pred ecch
Q 039837 279 PIVP 282 (544)
Q Consensus 279 ~~~P 282 (544)
++..
T Consensus 160 i~~~ 163 (628)
T TIGR02316 160 VSAD 163 (628)
T ss_pred EECC
Confidence 8754
No 215
>PLN02614 long-chain acyl-CoA synthetase
Probab=35.38 E-value=1.5e+02 Score=32.03 Aligned_cols=86 Identities=12% Similarity=-0.159 Sum_probs=64.9
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|++.+...+..+...+.. ++.+++++...++-..- +....++++..|+..+... ...+.++...+++.++.++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~v 155 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPE--WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIV 155 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEE
Confidence 346888887777666654432 67888988888776653 4466788999999998776 4678899999999999999
Q ss_pred ecchHHHHHH
Q 039837 279 PIVPPIILSL 288 (544)
Q Consensus 279 ~~~P~~~~~l 288 (544)
++....+..+
T Consensus 156 i~~~~~~~~~ 165 (666)
T PLN02614 156 FVEEKKISEL 165 (666)
T ss_pred EECHHHHHHH
Confidence 9877655544
No 216
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=34.97 E-value=1.4e+02 Score=29.39 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=39.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCC-----CCHHHHHHHHHhcCceEEE
Q 039837 74 RGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPT-----AHASELKKQVDAADAKLIV 140 (544)
Q Consensus 74 ~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii 140 (544)
..+...|...++++||.|++..+ .+.....++...|+.++.++.+ .+.+.++..+.. +.++|+
T Consensus 59 ~al~lal~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 59 AGMHITLMALGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHHcCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 33444555667899999876543 3444455667789887766532 456777777653 556665
No 217
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.90 E-value=1.4e+02 Score=31.01 Aligned_cols=85 Identities=12% Similarity=-0.015 Sum_probs=63.8
Q ss_pred eccHHHHHHHHHhhccccCC--cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceee
Q 039837 202 MLTHRNLVANLCSTLFSVVP--EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFA 278 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 278 (544)
.+|+..+...+..+...+.. ++..++++...++-.. .+...+++++..|+..+..++ ....++...+++.+++.+
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 112 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP--QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVA 112 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEE
Confidence 47888887777666554432 5677888887777654 444678889999999998764 578889999999999999
Q ss_pred ecchHHHHHH
Q 039837 279 PIVPPIILSL 288 (544)
Q Consensus 279 ~~~P~~~~~l 288 (544)
+........+
T Consensus 113 i~~~~~~~~~ 122 (546)
T PRK08314 113 IVGSELAPKV 122 (546)
T ss_pred EEccchhhhH
Confidence 8877665544
No 218
>PRK13388 acyl-CoA synthetase; Provisional
Probab=34.75 E-value=1.5e+02 Score=30.88 Aligned_cols=84 Identities=10% Similarity=-0.094 Sum_probs=61.0
Q ss_pred eeccHHHHHHHHHhhccccCC-cc-cCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCcee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EM-IGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTF 277 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~-~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~ 277 (544)
..+|+..+...+..+...+.. +. .+++.+...++-... +...+++++..|+..+..++ ....++...+.+.++..
T Consensus 25 ~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~--~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~ 102 (540)
T PRK13388 25 RTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPE--MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQL 102 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcH--HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCE
Confidence 467888888777666654432 45 567777777776553 33567889999999997764 56788889999999999
Q ss_pred eecchHHHH
Q 039837 278 APIVPPIIL 286 (544)
Q Consensus 278 ~~~~P~~~~ 286 (544)
+++......
T Consensus 103 ~i~~~~~~~ 111 (540)
T PRK13388 103 LVTDAEHRP 111 (540)
T ss_pred EEEChhhhH
Confidence 887665443
No 219
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=34.71 E-value=1.3e+02 Score=32.06 Aligned_cols=82 Identities=13% Similarity=0.076 Sum_probs=63.1
Q ss_pred eeeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCcee
Q 039837 200 GVMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTF 277 (544)
Q Consensus 200 gV~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~ 277 (544)
...+|++.+...+..+...+.. +...++++...+|-...+ ...+++++..|+..+... .+...++...++..++..
T Consensus 96 ~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~ 173 (637)
T PRK00174 96 SRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA--AVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKL 173 (637)
T ss_pred eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcE
Confidence 4568999988877666655432 677889998888776643 356788999999998876 467889999999999999
Q ss_pred eecchH
Q 039837 278 APIVPP 283 (544)
Q Consensus 278 ~~~~P~ 283 (544)
+++...
T Consensus 174 li~~~~ 179 (637)
T PRK00174 174 VITADE 179 (637)
T ss_pred EEEcCc
Confidence 887543
No 220
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=34.57 E-value=1.6e+02 Score=31.93 Aligned_cols=88 Identities=14% Similarity=0.022 Sum_probs=66.4
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|++.+...+..+...+.. +..+++++...++-..- +....++++..|+..+... ...++++...+++.++.++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 182 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE--WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTV 182 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEE
Confidence 457888888877666654432 67788888877776543 3456788889999998765 5688899999999999999
Q ss_pred ecchHHHHHHhc
Q 039837 279 PIVPPIILSLVK 290 (544)
Q Consensus 279 ~~~P~~~~~l~~ 290 (544)
++....+..+.+
T Consensus 183 i~~~~~~~~l~~ 194 (696)
T PLN02387 183 ICDSKQLKKLID 194 (696)
T ss_pred EECHHHHHHHHH
Confidence 988877766643
No 221
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=34.41 E-value=94 Score=29.93 Aligned_cols=60 Identities=15% Similarity=0.109 Sum_probs=47.3
Q ss_pred HHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEecc
Q 039837 80 LRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYA 143 (544)
Q Consensus 80 L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 143 (544)
|++.+++||++|+|..--+.-.+.+++|-.. |+-++-++.+. +.....++..++.++.+.
T Consensus 159 lk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~~---~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 159 LKKANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRSE---EKLELAKKLGADHVINSS 218 (339)
T ss_pred hhhcCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCCh---HHHHHHHHhCCcEEEEcC
Confidence 5667899999999999999999999999844 47777776553 446667788888888764
No 222
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=34.04 E-value=2.1e+02 Score=26.38 Aligned_cols=73 Identities=14% Similarity=0.083 Sum_probs=50.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHHhcCe---eecCCCCCCHHHHHHHHHhcCceEEEeccc-----h---HHHhhcCCCcE
Q 039837 88 GQVVIVVLPNVAEYGIVALGIMAAGGV---FSGANPTAHASELKKQVDAADAKLIVSYAP-----I---YEKVKGLGLPI 156 (544)
Q Consensus 88 gd~V~i~~~n~~~~~~~~lA~~~~G~~---~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-----~---~~~~~~~~~~~ 156 (544)
+.++.+-.-+..+.+- .|..+|.. .+.+.+.++.+.=..++++.+++++++-++ . .+...+.++++
T Consensus 150 ~~~~~~RvLP~~~~l~---~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~v 226 (256)
T TIGR00715 150 EAVVFVRVLPYPQALA---QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINV 226 (256)
T ss_pred CceEEEEECCCchhhH---HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcE
Confidence 4555544444455444 67777764 677778888888899999999999998543 2 23345567888
Q ss_pred EEecccc
Q 039837 157 IVLGEER 163 (544)
Q Consensus 157 ~~~~~~~ 163 (544)
+++..+.
T Consensus 227 ivI~RP~ 233 (256)
T TIGR00715 227 IRIARPQ 233 (256)
T ss_pred EEEeCCC
Confidence 8887554
No 223
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=33.99 E-value=1.1e+02 Score=26.45 Aligned_cols=47 Identities=11% Similarity=-0.049 Sum_probs=33.5
Q ss_pred CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHH
Q 039837 61 GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGI 108 (544)
Q Consensus 61 ~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~ 108 (544)
+.-+||+|+.+.+.++|..+.+. ++....+.+...++...++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH
Confidence 45789999999999999999875 222234556666666666666654
No 224
>PLN02574 4-coumarate--CoA ligase-like
Probab=33.95 E-value=1.6e+02 Score=30.79 Aligned_cols=85 Identities=20% Similarity=0.087 Sum_probs=63.6
Q ss_pred eccHHHHHHHHHhhccccC--CcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceee
Q 039837 202 MLTHRNLVANLCSTLFSVV--PEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFA 278 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 278 (544)
.+|++.+...+..+...+. .++.++|++...++-.. .+...++.++..|+..+..++ ....++...+.+.++..+
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~--~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~ 143 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV--YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLA 143 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc--hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEE
Confidence 5688888777766665543 26778899888877654 334567889999999998764 577888889999999988
Q ss_pred ecchHHHHHH
Q 039837 279 PIVPPIILSL 288 (544)
Q Consensus 279 ~~~P~~~~~l 288 (544)
+..+.....+
T Consensus 144 ~~~~~~~~~~ 153 (560)
T PLN02574 144 FTSPENVEKL 153 (560)
T ss_pred EECHHHHHHH
Confidence 8877665544
No 225
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=33.94 E-value=1.3e+02 Score=32.40 Aligned_cols=80 Identities=13% Similarity=-0.013 Sum_probs=60.5
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|++.|...+..+...+.. +..++|++...+|-... +...+++++..|+..+... .+....+...++..++..+
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~l 190 (655)
T PRK03584 113 RELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPE--TVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVL 190 (655)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEE
Confidence 457888887776665554432 67888999988887654 3367788999999988765 4678889999999999888
Q ss_pred ecch
Q 039837 279 PIVP 282 (544)
Q Consensus 279 ~~~P 282 (544)
++..
T Consensus 191 i~~~ 194 (655)
T PRK03584 191 IAVD 194 (655)
T ss_pred EEcc
Confidence 8754
No 226
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=33.84 E-value=1.7e+02 Score=28.77 Aligned_cols=64 Identities=20% Similarity=0.167 Sum_probs=41.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCC-----CCCHHHHHHHHHh---cCceEEE
Q 039837 74 RGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANP-----TAHASELKKQVDA---ADAKLIV 140 (544)
Q Consensus 74 ~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~ii 140 (544)
..+...+...++++||.|++..+. +....-++...|+.++.++. ..+.+.++..++. -+.++++
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~ 126 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIV 126 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEE
Confidence 344445555678899998776554 34445666778887766543 2467788888764 3556665
No 227
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=33.75 E-value=1.2e+02 Score=32.54 Aligned_cols=80 Identities=16% Similarity=0.039 Sum_probs=60.8
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|.+.+...+..+...+.. ++.++|++...+|-.--+ ...+++++..|+..+... .+....+...+++.++..+
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~--~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~l 190 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA--VVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLL 190 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEE
Confidence 356888877776666554432 778999999998887643 356788899999888775 4678899999999999888
Q ss_pred ecch
Q 039837 279 PIVP 282 (544)
Q Consensus 279 ~~~P 282 (544)
++..
T Consensus 191 i~~~ 194 (652)
T TIGR01217 191 FTVD 194 (652)
T ss_pred EEcc
Confidence 8654
No 228
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=33.74 E-value=1.3e+02 Score=32.05 Aligned_cols=82 Identities=12% Similarity=0.024 Sum_probs=62.8
Q ss_pred eeeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCcee
Q 039837 200 GVMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTF 277 (544)
Q Consensus 200 gV~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~ 277 (544)
...+|.+.+...+..+...+.. +..+++++...+|-... +...+++++..|+..+... .+.+..+...+++.++..
T Consensus 86 ~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~ 163 (625)
T TIGR02188 86 VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPE--AAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKL 163 (625)
T ss_pred eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCE
Confidence 4568888887777666554432 67889999988887654 3467788999999988765 568889999999999999
Q ss_pred eecchH
Q 039837 278 APIVPP 283 (544)
Q Consensus 278 ~~~~P~ 283 (544)
+++...
T Consensus 164 li~~~~ 169 (625)
T TIGR02188 164 VITADE 169 (625)
T ss_pred EEEcCc
Confidence 887653
No 229
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.52 E-value=1.6e+02 Score=30.92 Aligned_cols=83 Identities=12% Similarity=-0.008 Sum_probs=64.1
Q ss_pred eeccHHHHHHHHHhhccccC--CcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCcee
Q 039837 201 VMLTHRNLVANLCSTLFSVV--PEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTF 277 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~ 277 (544)
..+|++.+...+..+...+. .++..++++...++-...+ ...+++++..|+..+..++ +....+...+++.++..
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~--~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY--PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceE
Confidence 45799999888877776663 2678889998888776643 3567889999999998764 57788889999999999
Q ss_pred eecchHHH
Q 039837 278 APIVPPII 285 (544)
Q Consensus 278 ~~~~P~~~ 285 (544)
++......
T Consensus 126 ii~~~~~~ 133 (562)
T PRK05677 126 LVCLANMA 133 (562)
T ss_pred EEEecchh
Confidence 88765543
No 230
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=33.50 E-value=34 Score=21.66 Aligned_cols=20 Identities=20% Similarity=0.338 Sum_probs=18.6
Q ss_pred EEEecCCCCHhHHHHHHhhc
Q 039837 307 VMTAAAPLAPDLLSSFEKKF 326 (544)
Q Consensus 307 v~~~G~~~~~~~~~~~~~~~ 326 (544)
+.++|.|++.++...++..|
T Consensus 24 vSf~GrPltdevK~a~k~i~ 43 (49)
T PF06543_consen 24 VSFDGRPLTDEVKEAMKLIF 43 (49)
T ss_pred eeeCCeeCCHHHHHHHHHHH
Confidence 99999999999999998887
No 231
>PRK08162 acyl-CoA synthetase; Validated
Probab=33.43 E-value=1.4e+02 Score=31.16 Aligned_cols=85 Identities=11% Similarity=-0.045 Sum_probs=64.2
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|.+.+...+..+...+.. +...++++...+|-... +...+++++..|+..+..+ ......+...+++.+++.+
T Consensus 42 ~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 119 (545)
T PRK08162 42 RRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPA--MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVL 119 (545)
T ss_pred eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchH--HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEE
Confidence 358888888877666655432 66788888887777653 3467788999999888776 4678889999999999999
Q ss_pred ecchHHHHH
Q 039837 279 PIVPPIILS 287 (544)
Q Consensus 279 ~~~P~~~~~ 287 (544)
+..+.....
T Consensus 120 ~~~~~~~~~ 128 (545)
T PRK08162 120 IVDTEFAEV 128 (545)
T ss_pred EEccchhhH
Confidence 887765543
No 232
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=33.32 E-value=1.8e+02 Score=30.97 Aligned_cols=85 Identities=15% Similarity=-0.062 Sum_probs=63.0
Q ss_pred eeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEc-Cc-cC--HHHHHHHHHHcCce
Q 039837 201 VMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMM-NR-FE--LRAFLDALITHEVT 276 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~-~~--~~~~~~~i~~~~~t 276 (544)
..+|++.+...+..+...+.....+++++...++-... +...+++++..|+..+.. +. .. .+.+...++..++.
T Consensus 67 ~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 144 (612)
T PRK12476 67 VELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID--YVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPT 144 (612)
T ss_pred eEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh--HHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCC
Confidence 46799988887777666554345788888888877653 446788999999998876 33 22 67788899999999
Q ss_pred eeecchHHHHH
Q 039837 277 FAPIVPPIILS 287 (544)
Q Consensus 277 ~~~~~P~~~~~ 287 (544)
.+++.......
T Consensus 145 ~li~~~~~~~~ 155 (612)
T PRK12476 145 VVLTTTAAAEA 155 (612)
T ss_pred EEEEcHHHHHH
Confidence 99887765543
No 233
>PRK07470 acyl-CoA synthetase; Validated
Probab=33.17 E-value=4.3e+02 Score=27.25 Aligned_cols=87 Identities=18% Similarity=0.129 Sum_probs=55.8
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecC-CCCCCHHHHHHHHHhcCceEEE
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGA-NPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~ii 140 (544)
-.+|+..+...+......+. .++.++|++...++-+..+-...+..+..|+..+.+ ....+++.+...+++.++.++.
T Consensus 181 v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 259 (528)
T PRK07470 181 AVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLF 259 (528)
T ss_pred EEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEe
Confidence 35788888644332111111 256788999888885544333333344556555444 3457788999999999999999
Q ss_pred eccchHHHh
Q 039837 141 SYAPIYEKV 149 (544)
Q Consensus 141 ~~~~~~~~~ 149 (544)
..+..+..+
T Consensus 260 ~~P~~~~~l 268 (528)
T PRK07470 260 TVPTILKML 268 (528)
T ss_pred chHHHHHHH
Confidence 888777655
No 234
>PLN03052 acetate--CoA ligase; Provisional
Probab=32.77 E-value=1.4e+02 Score=32.71 Aligned_cols=81 Identities=11% Similarity=-0.062 Sum_probs=62.9
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|.+.|...+..+...+.. +..++|++...+|-..-+ ...+++++..|+..+.+. .+.+.++...+++.++.++
T Consensus 207 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~--via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~l 284 (728)
T PLN03052 207 NRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA--VIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAI 284 (728)
T ss_pred EEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEE
Confidence 457888887777666554432 778999999998876643 357788899999988775 5788999999999999999
Q ss_pred ecchH
Q 039837 279 PIVPP 283 (544)
Q Consensus 279 ~~~P~ 283 (544)
++...
T Consensus 285 it~d~ 289 (728)
T PLN03052 285 FTQDV 289 (728)
T ss_pred EEcCc
Confidence 87654
No 235
>PRK05852 acyl-CoA synthetase; Validated
Probab=32.72 E-value=3.4e+02 Score=28.06 Aligned_cols=85 Identities=19% Similarity=0.210 Sum_probs=60.0
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHHhcCeeec-CCCCCCHHHHHHHHHhcCceEE
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA--EYGIVALGIMAAGGVFSG-ANPTAHASELKKQVDAADAKLI 139 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~i 139 (544)
.+|+..+...+..+...+ +++++|++....+-.. .++..+++.+..|...+. -....++..+...+++.++..+
T Consensus 195 ~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 271 (534)
T PRK05852 195 PWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWY 271 (534)
T ss_pred EecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEE
Confidence 478888877666555433 6789998887777443 445567777777776553 2345667788888999999999
Q ss_pred EeccchHHHhh
Q 039837 140 VSYAPIYEKVK 150 (544)
Q Consensus 140 i~~~~~~~~~~ 150 (544)
+..+.....+.
T Consensus 272 ~~~P~~~~~l~ 282 (534)
T PRK05852 272 TAVPTIHQILL 282 (534)
T ss_pred EcChHHHHHHH
Confidence 88777665543
No 236
>PRK05850 acyl-CoA synthetase; Validated
Probab=32.61 E-value=1.4e+02 Score=31.28 Aligned_cols=86 Identities=9% Similarity=-0.091 Sum_probs=61.9
Q ss_pred eeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc----cCHHHHHHHHHHcCce
Q 039837 201 VMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR----FELRAFLDALITHEVT 276 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t 276 (544)
..+|++.+...+..+...+.....+++++...++-+. .+...+++++..|+..+..+. ....++...+++.++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g~~gd~V~l~~~n~~--~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHGSTGDRAVILAPQGL--EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCcc--cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 4678888877666655544321146788887777654 344678889999999998863 3567888899999999
Q ss_pred eeecchHHHHHH
Q 039837 277 FAPIVPPIILSL 288 (544)
Q Consensus 277 ~~~~~P~~~~~l 288 (544)
.+++.+.....+
T Consensus 112 ~il~~~~~~~~~ 123 (578)
T PRK05850 112 VVLTTSAVVDDV 123 (578)
T ss_pred EEEEcHHHHHHH
Confidence 999887765544
No 237
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=32.60 E-value=1.7e+02 Score=30.63 Aligned_cols=84 Identities=14% Similarity=0.038 Sum_probs=63.1
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 278 (544)
..+|++.+...+..+...+.. ++..++++...++-...+ ...+++++..|+..+..++ .....+...+++.+++.+
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~--~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~v 124 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY--PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAI 124 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEE
Confidence 468999998877666655432 667888888777766543 3567889999999997764 568889999999999998
Q ss_pred ecchHHHH
Q 039837 279 PIVPPIIL 286 (544)
Q Consensus 279 ~~~P~~~~ 286 (544)
+.......
T Consensus 125 i~~~~~~~ 132 (557)
T PRK07059 125 VVLENFAT 132 (557)
T ss_pred EEchhhHH
Confidence 87665543
No 238
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=32.45 E-value=1.4e+02 Score=28.04 Aligned_cols=63 Identities=24% Similarity=0.156 Sum_probs=46.8
Q ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHHhcC-eeecCCCCCCHHHHHHHHHhcCceEEEeccchH
Q 039837 84 GLRKGQVVIVVLPNVAEYGIVALGIMAAGG-VFSGANPTAHASELKKQVDAADAKLIVSYAPIY 146 (544)
Q Consensus 84 Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 146 (544)
.+.+||.|+=-..||.---+..--|-..|. +.-.+..+-..+++...|...+++.+|++++..
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~ 220 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELR 220 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhc
Confidence 478899998888888543333333344555 445667778899999999999999999987764
No 239
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=32.30 E-value=4.8e+02 Score=26.60 Aligned_cols=84 Identities=12% Similarity=0.075 Sum_probs=60.1
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc-cHHHHHHHHHHhcCeeecCCCC--CCHHHHHHHHHhcCceE
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA-EYGIVALGIMAAGGVFSGANPT--AHASELKKQVDAADAKL 138 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 138 (544)
-.+|++.+...+..+.. ..++..+|++....+-+. ..+..+++++..|+..+..++. .....+...+...++..
T Consensus 159 v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 46899998766654433 357888898887777543 3345577888999998877764 35677888888999988
Q ss_pred EEeccchHHH
Q 039837 139 IVSYAPIYEK 148 (544)
Q Consensus 139 ii~~~~~~~~ 148 (544)
+...+.....
T Consensus 236 ~~~~p~~~~~ 245 (502)
T TIGR01734 236 WVSTPSFVDM 245 (502)
T ss_pred EEEChhHHHH
Confidence 8877665543
No 240
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=32.07 E-value=1.9e+02 Score=27.52 Aligned_cols=64 Identities=16% Similarity=0.095 Sum_probs=49.7
Q ss_pred HHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccch
Q 039837 79 ALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPI 145 (544)
Q Consensus 79 ~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 145 (544)
.|++.|++||.+|+|..--+.-++...+|... |.-++.++.. ...-+..++..+++..+...+.
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~--~~kkeea~~~LGAd~fv~~~~d 236 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTS--SKKKEEAIKSLGADVFVDSTED 236 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCC--chhHHHHHHhcCcceeEEecCC
Confidence 36788999999999999999999999999854 6666666654 3355677888888888766543
No 241
>PRK11761 cysM cysteine synthase B; Provisional
Probab=31.93 E-value=2.7e+02 Score=26.32 Aligned_cols=89 Identities=15% Similarity=0.061 Sum_probs=53.8
Q ss_pred ceEEEEccCCceeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHH
Q 039837 52 KVAFVEAVSGKAYTYAQVARDTRGFAKALRSLG-LRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQ 130 (544)
Q Consensus 52 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~G-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 130 (544)
++.+.....+.+=||++ +-+..+...+.+.| +.+|+.|...+. +-.-..+-++|...|..+..+-|...+......
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~aSs-GN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIEATS-GNTGIALAMIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEEeCC-ChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 45554432233445655 22332333344455 477887755444 444555566777899876655555555567788
Q ss_pred HHhcCceEEEecc
Q 039837 131 VDAADAKLIVSYA 143 (544)
Q Consensus 131 l~~~~~~~ii~~~ 143 (544)
++..+++++++..
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 8999999999875
No 242
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=31.83 E-value=88 Score=22.39 Aligned_cols=50 Identities=22% Similarity=0.312 Sum_probs=32.0
Q ss_pred CCCCCCHHHHHHhhhhhcCC-----ceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 039837 32 VPENVTLPDFVLQDAELYAD-----KVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLP 96 (544)
Q Consensus 32 ~~~~~~l~~~l~~~a~~~p~-----~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~ 96 (544)
.+...|+.+++.+...++|. +..+.....++.++ .+.-++.||+|+++-+
T Consensus 22 ~~~~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vNg~~v~---------------~~~~l~~gD~v~i~pp 76 (80)
T cd00754 22 LPEGATVGELLDALEARYPGLLEELLARVRIAVNGEYVR---------------LDTPLKDGDEVAIIPP 76 (80)
T ss_pred CCCCCcHHHHHHHHHHHCchHHHhhhhcEEEEECCeEcC---------------CCcccCCCCEEEEeCC
Confidence 34577999999999988875 22222111244444 1234789999999876
No 243
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=31.73 E-value=3.7e+02 Score=31.20 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=68.2
Q ss_pred cCCceEEEEccCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHHHhcCeeecCC
Q 039837 49 YADKVAFVEAVSG-------KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNV--AEYGIVALGIMAAGGVFSGAN 119 (544)
Q Consensus 49 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~ 119 (544)
.++.+|++--.+| -.+|...+...+..... ..++.++|++...+|-. ..+...+++.+..|+..+..+
T Consensus 780 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 780 KPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 4577776532112 35788888776655443 34678899887776632 233344677778898888777
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchHHHh
Q 039837 120 PTAHASELKKQVDAADAKLIVSYAPIYEKV 149 (544)
Q Consensus 120 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 149 (544)
...+.+.+.+.+++.++..+...+.....+
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 886 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLRLY 886 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHHHH
Confidence 667888999999999999999887766544
No 244
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=31.71 E-value=1.7e+02 Score=30.06 Aligned_cols=83 Identities=7% Similarity=-0.127 Sum_probs=61.5
Q ss_pred eccHHHHHHHHHhhccccC-CcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVV-PEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|+..+...+..+...+. .++..++++....+-...+ ...+++++..|+..+..+ ...+..+...+++.+++.++
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~ 114 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF--IFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLV 114 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEE
Confidence 4677888777666554332 2677888888887776643 356788999999988775 46788899999999999998
Q ss_pred cchHHHH
Q 039837 280 IVPPIIL 286 (544)
Q Consensus 280 ~~P~~~~ 286 (544)
..+....
T Consensus 115 ~~~~~~~ 121 (517)
T PRK08008 115 TSAQFYP 121 (517)
T ss_pred EecchhH
Confidence 8776543
No 245
>PRK07787 acyl-CoA synthetase; Validated
Probab=31.40 E-value=5.4e+02 Score=26.04 Aligned_cols=82 Identities=16% Similarity=0.261 Sum_probs=58.6
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPN--VAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
.+|+..+...+..++.. .++.++|++...++- ...+...+++.+..|+..+..+ ..++..+...++ .++..+.
T Consensus 147 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~~ 221 (471)
T PRK07787 147 VLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLYF 221 (471)
T ss_pred EEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEEE
Confidence 57998888776655543 467889988766653 2334556788889999988665 456788888888 8888888
Q ss_pred eccchHHHh
Q 039837 141 SYAPIYEKV 149 (544)
Q Consensus 141 ~~~~~~~~~ 149 (544)
..+..+..+
T Consensus 222 ~~P~~~~~l 230 (471)
T PRK07787 222 GVPTVWSRI 230 (471)
T ss_pred cchHHHHHH
Confidence 776655444
No 246
>PRK05857 acyl-CoA synthetase; Validated
Probab=31.07 E-value=1.4e+02 Score=31.09 Aligned_cols=82 Identities=15% Similarity=-0.012 Sum_probs=61.2
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 278 (544)
..+|.+.+...+..+...+.. +..+++++...++-...+ ...+++++..|+..+..+. .....+...++..++..+
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~--~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~i 117 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET--YLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAA 117 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceE
Confidence 457888888777666654432 667888888887776643 3567889999999998764 577888888888888888
Q ss_pred ecchHH
Q 039837 279 PIVPPI 284 (544)
Q Consensus 279 ~~~P~~ 284 (544)
+..+..
T Consensus 118 i~~~~~ 123 (540)
T PRK05857 118 LVAPGS 123 (540)
T ss_pred EEeccc
Confidence 776643
No 247
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=30.70 E-value=2.7e+02 Score=27.39 Aligned_cols=62 Identities=13% Similarity=0.062 Sum_probs=43.3
Q ss_pred HcC-CCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEecc
Q 039837 82 SLG-LRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYA 143 (544)
Q Consensus 82 ~~G-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 143 (544)
+.| +++|....+....+-.-+.+-++|...|..+..+-|...+......++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 67885434445555666666677788898776666655556668889999999998763
No 248
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=30.68 E-value=1.8e+02 Score=29.39 Aligned_cols=56 Identities=25% Similarity=0.214 Sum_probs=36.0
Q ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCC-----CCHHHHHHHHHhcCceEEEec
Q 039837 83 LGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPT-----AHASELKKQVDAADAKLIVSY 142 (544)
Q Consensus 83 ~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 142 (544)
.++++||.|++..+. +.....++...|+.+++++.+ .+.+.++..+.. +.++|+..
T Consensus 106 ~~~~pGd~VIv~~~t---~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVAAG---FPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 478999998766544 344456667789887766542 356677776643 55666653
No 249
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=30.54 E-value=2.2e+02 Score=27.95 Aligned_cols=72 Identities=14% Similarity=0.042 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccch
Q 039837 67 AQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPI 145 (544)
Q Consensus 67 ~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 145 (544)
+-.+....+++..-++.|+ +++.-+-....+-+|+.++|..+..+=|..++...-..++..++.+++..+.+
T Consensus 99 RGa~~~~~kla~~~~~~gV-------iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~ 170 (457)
T KOG1250|consen 99 RGAGNALQKLAKQQKKAGV-------IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDW 170 (457)
T ss_pred hhHHHHHHHHHHhhhcCce-------EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccH
Confidence 3344444444444443332 55666667788889999999998888888889888999999999999987664
No 250
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=30.45 E-value=1.5e+02 Score=30.78 Aligned_cols=79 Identities=11% Similarity=-0.080 Sum_probs=59.4
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 278 (544)
..+|.+.+...+..+...+.. ++.+++++...+|-... +...+++++..|+.++..++ ....++...++..++.++
T Consensus 48 ~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 125 (547)
T PRK06087 48 ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCE--FTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMF 125 (547)
T ss_pred CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEE
Confidence 457888888777666654432 67788888888776653 44678899999999887764 567888888999998888
Q ss_pred ecc
Q 039837 279 PIV 281 (544)
Q Consensus 279 ~~~ 281 (544)
++.
T Consensus 126 ~~~ 128 (547)
T PRK06087 126 FAP 128 (547)
T ss_pred EEe
Confidence 764
No 251
>PRK09088 acyl-CoA synthetase; Validated
Probab=30.34 E-value=1.7e+02 Score=29.82 Aligned_cols=80 Identities=14% Similarity=-0.077 Sum_probs=59.1
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|++.+...+..+...+.. +...++++...++-... +...+++++..|+..+..+ ......+...+++.+++.+
T Consensus 21 ~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~i 98 (488)
T PRK09088 21 RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVW--LVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLL 98 (488)
T ss_pred cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEE
Confidence 457888887776665544432 56778888877777664 3356788999999988776 4577888899999999888
Q ss_pred ecch
Q 039837 279 PIVP 282 (544)
Q Consensus 279 ~~~P 282 (544)
++..
T Consensus 99 i~~~ 102 (488)
T PRK09088 99 LGDD 102 (488)
T ss_pred EEcc
Confidence 7654
No 252
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=30.33 E-value=4.8e+02 Score=26.94 Aligned_cols=97 Identities=21% Similarity=0.234 Sum_probs=64.8
Q ss_pred cCCceEEEEccCC-------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccH--HH-HHHHHHHhcCeeecC
Q 039837 49 YADKVAFVEAVSG-------KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEY--GI-VALGIMAAGGVFSGA 118 (544)
Q Consensus 49 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~--~~-~~lA~~~~G~~~v~l 118 (544)
.++.+|++--.+| -.+|...+...+.... ...++.++|++...+|-...+ .. ..++++..|+..+..
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 4667776521112 3578888876655433 345788999998887754322 22 357778888887654
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeccchHHHh
Q 039837 119 NPTAHASELKKQVDAADAKLIVSYAPIYEKV 149 (544)
Q Consensus 119 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 149 (544)
+...+..+-..+++.++.++...+..+..+
T Consensus 258 -~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 287 (527)
T TIGR02275 258 -PDPSPTDCFPLIERHKVTVTALVPPAVALW 287 (527)
T ss_pred -CCCCHHHHHHHHHHhCCeEEEecHHHHHHH
Confidence 445677788889999999998887765544
No 253
>PRK07867 acyl-CoA synthetase; Validated
Probab=30.27 E-value=2.2e+02 Score=29.61 Aligned_cols=84 Identities=7% Similarity=-0.092 Sum_probs=61.3
Q ss_pred eeccHHHHHHHHHhhccccCC--cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCcee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP--EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTF 277 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~ 277 (544)
..+|...+...+..+...+.. +...++.+...++-.. .+...+++++..|+.++..++ ....++...+++.++..
T Consensus 27 ~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 104 (529)
T PRK07867 27 SFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQL 104 (529)
T ss_pred cEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeE
Confidence 457888888877776665542 2455677766666544 344677889999999997764 57888999999999999
Q ss_pred eecchHHHH
Q 039837 278 APIVPPIIL 286 (544)
Q Consensus 278 ~~~~P~~~~ 286 (544)
+++......
T Consensus 105 li~~~~~~~ 113 (529)
T PRK07867 105 VLTESAHAE 113 (529)
T ss_pred EEECHhHHH
Confidence 988876554
No 254
>PRK07798 acyl-CoA synthetase; Validated
Probab=30.23 E-value=2.1e+02 Score=29.46 Aligned_cols=86 Identities=7% Similarity=-0.126 Sum_probs=61.6
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 278 (544)
-.+|...+...+..+...+.. +...++++...++-.. .+...+++++..|+..+..+. .....+...+++.++..+
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~--~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 104 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI--EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVAL 104 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEE
Confidence 457888887776666554432 5677787777765544 344677888999999997764 577888899999999999
Q ss_pred ecchHHHHHH
Q 039837 279 PIVPPIILSL 288 (544)
Q Consensus 279 ~~~P~~~~~l 288 (544)
+........+
T Consensus 105 ~~~~~~~~~~ 114 (533)
T PRK07798 105 VYEREFAPRV 114 (533)
T ss_pred EEchhhHHHH
Confidence 8876654443
No 255
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=30.19 E-value=3.8e+02 Score=28.46 Aligned_cols=100 Identities=20% Similarity=0.263 Sum_probs=68.9
Q ss_pred hhhcCCceEEE-Ec--cC----CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHHHhcCeee
Q 039837 46 AELYADKVAFV-EA--VS----GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNV--AEYGIVALGIMAAGGVFS 116 (544)
Q Consensus 46 a~~~p~~~a~~-~~--~~----~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v 116 (544)
+...|+.+|.+ +. .+ |--+||+-+...+..+...+. -++++|++..++|-. .+-+.. .++...|.+.+
T Consensus 186 ~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~-~~~~~~~g~~~ 262 (613)
T COG1022 186 APPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFE-GGLALYGGVTV 262 (613)
T ss_pred CCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHH-HHHHhhcceEE
Confidence 34578888854 32 11 256999999999988777775 378999999999944 233322 44444444444
Q ss_pred cCCCCCCHHHHHHHHHhcCceEEEeccchHHHhh
Q 039837 117 GANPTAHASELKKQVDAADAKLIVSYAPIYEKVK 150 (544)
Q Consensus 117 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 150 (544)
.- ..+...+..-+...+|.+++.-+..++.+.
T Consensus 263 ~~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~ 294 (613)
T COG1022 263 LF--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVY 294 (613)
T ss_pred Ee--cCCHHHHHHHHHHhCCeEEeechHHHHHHH
Confidence 33 344778999999999999998777766654
No 256
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=29.76 E-value=1.5e+02 Score=31.53 Aligned_cols=80 Identities=10% Similarity=-0.031 Sum_probs=60.4
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
-.+|.+.|...+..+...+.. +..++|++...+|-.-.. ...+++++..|+..+... .+....+...+++.++.++
T Consensus 83 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~l 160 (629)
T PRK10524 83 RTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA--AFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLI 160 (629)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEE
Confidence 457888887776655554432 778899999888876643 356788899999888765 5678889999999999988
Q ss_pred ecch
Q 039837 279 PIVP 282 (544)
Q Consensus 279 ~~~P 282 (544)
++..
T Consensus 161 i~~~ 164 (629)
T PRK10524 161 VSAD 164 (629)
T ss_pred EEcc
Confidence 8754
No 257
>PRK07529 AMP-binding domain protein; Validated
Probab=29.57 E-value=1.4e+02 Score=31.82 Aligned_cols=80 Identities=10% Similarity=-0.087 Sum_probs=58.4
Q ss_pred ceeeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEc-CccCHHHHHHHHHHcCce
Q 039837 199 KGVMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMM-NRFELRAFLDALITHEVT 276 (544)
Q Consensus 199 KgV~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t 276 (544)
+...+|++.+...+..+...+.. +..+++++...+|-...+ ...+++++..|. ++.. +...+..+...+++.++.
T Consensus 55 ~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi-~~pi~~~~~~~~i~~~l~~~~~~ 131 (632)
T PRK07529 55 RPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET--HFALWGGEAAGI-ANPINPLLEPEQIAELLRAAGAK 131 (632)
T ss_pred CCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCE-EEeCCCcCCHHHHHHHHHhcCCc
Confidence 45678999888777666654432 678889998888876543 356677777884 4444 456788999999999999
Q ss_pred eeecc
Q 039837 277 FAPIV 281 (544)
Q Consensus 277 ~~~~~ 281 (544)
.+++.
T Consensus 132 ~li~~ 136 (632)
T PRK07529 132 VLVTL 136 (632)
T ss_pred EEEEe
Confidence 88875
No 258
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=29.19 E-value=1.7e+02 Score=22.98 Aligned_cols=41 Identities=22% Similarity=0.122 Sum_probs=31.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC-CccHHHHHHHHHHhcCe
Q 039837 74 RGFAKALRSLGLRKGQVVIVVLPN-VAEYGIVALGIMAAGGV 114 (544)
Q Consensus 74 ~~la~~L~~~Gi~~gd~V~i~~~n-~~~~~~~~lA~~~~G~~ 114 (544)
..+.+.+...|+.++..|.++|.. +.....+.+.+...|..
T Consensus 65 ~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 65 EEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 345555667788899999999988 47776777777788865
No 259
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=28.60 E-value=1.7e+02 Score=30.60 Aligned_cols=83 Identities=13% Similarity=0.041 Sum_probs=62.2
Q ss_pred eeeccHHHHHHHHHhhccccCC--cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCce
Q 039837 200 GVMLTHRNLVANLCSTLFSVVP--EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVT 276 (544)
Q Consensus 200 gV~~t~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t 276 (544)
+..+|...+...+..+...+.. ++..++++...++-... +...+++++..|+..+..+. ....++...+++.++.
T Consensus 47 ~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e--~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~ 124 (562)
T PRK12492 47 GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ--YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGAR 124 (562)
T ss_pred CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCce
Confidence 3467899988877777665532 56788888887776653 44677889999998887764 5778899999999999
Q ss_pred eeecchHH
Q 039837 277 FAPIVPPI 284 (544)
Q Consensus 277 ~~~~~P~~ 284 (544)
.++..+.+
T Consensus 125 ~~i~~~~~ 132 (562)
T PRK12492 125 ALVYLNMF 132 (562)
T ss_pred EEEecccc
Confidence 88776543
No 260
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=28.54 E-value=3.7e+02 Score=25.34 Aligned_cols=64 Identities=19% Similarity=0.170 Sum_probs=42.0
Q ss_pred HHHcC-CCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccc
Q 039837 80 LRSLG-LRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAP 144 (544)
Q Consensus 80 L~~~G-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 144 (544)
..+.| +.+|+.|...+ .+-.-..+-+++.+.|..+..+-|...+......++..+++++++...
T Consensus 48 a~~~g~~~~g~~vv~aS-sGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 48 AEKRGLLKPGKTIVEPT-SGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHcCCCCCCCEEEEeC-CChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 44455 47788774444 444455555667778987665555544445678889999999988754
No 261
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=28.37 E-value=5.1e+02 Score=26.80 Aligned_cols=84 Identities=18% Similarity=0.155 Sum_probs=59.6
Q ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHH---HHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceE
Q 039837 62 KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYG---IVALGIMAAGGVFSGANPTAHASELKKQVDAADAKL 138 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~---~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 138 (544)
-.+|...+...+..... ..+++++|++...+|-...+- ...++++..|+..+... ..........+++.++.+
T Consensus 200 V~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAP-DPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECC-CCCHHHHHHHHHHhCCcE
Confidence 35799998887765443 346889999988877543222 24678888899887654 445667788899999998
Q ss_pred EEeccchHHHh
Q 039837 139 IVSYAPIYEKV 149 (544)
Q Consensus 139 ii~~~~~~~~~ 149 (544)
+...+.....+
T Consensus 276 ~~~~p~~~~~l 286 (536)
T PRK10946 276 TALVPPAVSLW 286 (536)
T ss_pred EEeChHHHHHH
Confidence 88776655444
No 262
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=28.28 E-value=2e+02 Score=29.56 Aligned_cols=85 Identities=11% Similarity=-0.025 Sum_probs=60.8
Q ss_pred eccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|...+...+..+...+.. ++..++++...+|-... +...+++++..|+..+..++ .....+...+++.+++.++
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~ 88 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFA--FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLI 88 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEE
Confidence 45666676655555443321 66788888887777653 44677889999999988764 5788899999999999998
Q ss_pred cchHHHHHH
Q 039837 280 IVPPIILSL 288 (544)
Q Consensus 280 ~~P~~~~~l 288 (544)
+.......+
T Consensus 89 ~~~~~~~~~ 97 (509)
T PRK12406 89 AHADLLHGL 97 (509)
T ss_pred Eccchhhhh
Confidence 776655543
No 263
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=28.20 E-value=4.5e+02 Score=23.78 Aligned_cols=91 Identities=16% Similarity=0.217 Sum_probs=43.8
Q ss_pred CceEEEcCCCcEEEEeecCCceeecce---eeChHHHHHHHhcCCCccceEEEeecCCCCCceeEEEEEeCCCCCCCHHH
Q 039837 421 GDIGYIDDDGDIFIVDRIKELIKYKGF---QVAPAELEAILLTHPSVEDAAVVSLPDEEAGEIPAACVVMNPNAKESEDD 497 (544)
Q Consensus 421 GD~~~~~~~g~~~~~GR~~d~i~~~G~---~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 497 (544)
|.+.+.++||++.+.|.. +.+.+. ++.-..++..+...+ .+.++++.++ + ....++..++ .-.-...
T Consensus 55 ~~i~Y~~~dg~y~i~G~l---~d~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~~---~-k~~I~vFtDp-~CpyCkk 124 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPM---YDVSGTAPVNVTNQLLLKKLNALE--KEMIVYKAPQ---E-KHVITVFTDI-TCGYCHK 124 (232)
T ss_pred CeEEEEcCCCCEEEeeee---EecCCCCCCChHHHHHHHHHHhhh--hhcEEecCCC---C-CEEEEEEECC-CChHHHH
Confidence 457778888988888864 444332 332222333444445 3445554331 2 2233333333 3344455
Q ss_pred HHHHHHhcccCCCceeEEEEeecCCCCC
Q 039837 498 IMDFVASNVATYKKVRVLHFVDGIPKSH 525 (544)
Q Consensus 498 l~~~l~~~l~~~~~p~~~~~~~~~P~t~ 525 (544)
+.+.+.+... .. . .+.++ .+|+..
T Consensus 125 l~~~l~~~~~-~~-v-~v~~~-~~P~~g 148 (232)
T PRK10877 125 LHEQMKDYNA-LG-I-TVRYL-AFPRQG 148 (232)
T ss_pred HHHHHHHHhc-CC-e-EEEEE-eccCCC
Confidence 6555554322 12 2 23332 577753
No 264
>PRK06178 acyl-CoA synthetase; Validated
Probab=27.61 E-value=2.1e+02 Score=29.96 Aligned_cols=85 Identities=8% Similarity=-0.076 Sum_probs=63.0
Q ss_pred eccHHHHHHHHHhhccccC-CcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVV-PEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|+..+...+..+...+. .+...++.+...++-... +...+++++..|+..+..+ ......+...+++.++..++
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii 135 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ--FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLL 135 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH--HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEE
Confidence 5788888777666555442 156778888877777664 3356788888999888765 45778899999999999999
Q ss_pred cchHHHHHH
Q 039837 280 IVPPIILSL 288 (544)
Q Consensus 280 ~~P~~~~~l 288 (544)
+.+.....+
T Consensus 136 ~~~~~~~~l 144 (567)
T PRK06178 136 ALDQLAPVV 144 (567)
T ss_pred EccchHHHH
Confidence 888766554
No 265
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=27.28 E-value=4.1e+02 Score=26.80 Aligned_cols=55 Identities=9% Similarity=-0.057 Sum_probs=26.4
Q ss_pred CCCEEEEEcCCCccHH-HHHHHHHHhcCeeecCCCCCCHH----HHHHHHHhcCceEEEecc
Q 039837 87 KGQVVIVVLPNVAEYG-IVALGIMAAGGVFSGANPTAHAS----ELKKQVDAADAKLIVSYA 143 (544)
Q Consensus 87 ~gd~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~~~~~~~----~l~~~l~~~~~~~ii~~~ 143 (544)
.|.+|+|..+.+..+- +-++. ..|..++.+-...... .++..+.......++++.
T Consensus 299 ~gkrv~v~g~~~~~~~l~~~L~--elG~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 358 (429)
T cd03466 299 FGRKAAIYGEPDFVVAITRFVL--ENGMVPVLIATGSESKKLKEKLEEDLKEYVEKCVILDG 358 (429)
T ss_pred CCCEEEEEcCHHHHHHHHHHHH--HCCCEEEEEEeCCCChHHHHHHHHHHHhcCCceEEEeC
Confidence 4678888776433222 22332 5677654443333222 233334444555555543
No 266
>PRK10595 SOS cell division inhibitor; Provisional
Probab=27.04 E-value=2.1e+02 Score=24.22 Aligned_cols=66 Identities=11% Similarity=-0.012 Sum_probs=42.5
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCee---ecCCCCCCHHHHHHH---HHhcCceEEEe
Q 039837 76 FAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVF---SGANPTAHASELKKQ---VDAADAKLIVS 141 (544)
Q Consensus 76 la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~---v~l~~~~~~~~l~~~---l~~~~~~~ii~ 141 (544)
.+.+|.+.|+..+..+.|...+..+.+-++-=|+++|..- .-++...+.+.++++ .+..++-.++.
T Consensus 69 ~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~ 140 (164)
T PRK10595 69 SREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIM 140 (164)
T ss_pred CHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEE
Confidence 3567888899877777777777788888888888888532 222336665554443 34445544443
No 267
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=26.76 E-value=2.8e+02 Score=26.37 Aligned_cols=100 Identities=27% Similarity=0.279 Sum_probs=76.2
Q ss_pred CCCCCHHHHHHhhhhhcCCceEEEEcc------C-CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC-CCccHHHH
Q 039837 33 PENVTLPDFVLQDAELYADKVAFVEAV------S-GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLP-NVAEYGIV 104 (544)
Q Consensus 33 ~~~~~l~~~l~~~a~~~p~~~a~~~~~------~-~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~-n~~~~~~~ 104 (544)
..+.|+..+|...-++.+.++.-+++. + ..-+--+|+...+..+++.|+.. ++...-|.++.+ ...+.+-+
T Consensus 137 GKSTTlAamId~iN~~~~~HIlTIEDPIE~vh~skkslI~QREvG~dT~sF~~aLraA-LReDPDVIlvGEmRD~ETi~~ 215 (353)
T COG2805 137 GKSTTLAAMIDYINKHKAKHILTIEDPIEYVHESKKSLINQREVGRDTLSFANALRAA-LREDPDVILVGEMRDLETIRL 215 (353)
T ss_pred cHHHHHHHHHHHHhccCCcceEEecCchHhhhcchHhhhhHHHhcccHHHHHHHHHHH-hhcCCCEEEEeccccHHHHHH
Confidence 466799999999999999888866431 1 13367789999999999999975 566666777777 66888888
Q ss_pred HHHHHHhcC-eeecCCCCCCHHHHHHHHHh
Q 039837 105 ALGIMAAGG-VFSGANPTAHASELKKQVDA 133 (544)
Q Consensus 105 ~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~ 133 (544)
.+-+...|. ++..++.+...+.+.+++..
T Consensus 216 ALtAAETGHLV~~TLHT~sA~~ti~Riidv 245 (353)
T COG2805 216 ALTAAETGHLVFGTLHTNSAAKTIDRIIDV 245 (353)
T ss_pred HHHHHhcCCEEEEecccccHHHHHHHHHHh
Confidence 888888997 55677777777777777663
No 268
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=26.73 E-value=82 Score=28.75 Aligned_cols=65 Identities=17% Similarity=0.089 Sum_probs=50.2
Q ss_pred HHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCC--HHHHHHHHHhc-CceEEEecc
Q 039837 79 ALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAH--ASELKKQVDAA-DAKLIVSYA 143 (544)
Q Consensus 79 ~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~~-~~~~ii~~~ 143 (544)
.+.+.-..||.-=++.||++..+++.--++.-++.+-||++|+++ .+.+..+++.- .++++|...
T Consensus 101 ~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tS 168 (375)
T KOG0633|consen 101 LIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTS 168 (375)
T ss_pred HHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcC
Confidence 444444578855558889999998888999999999999999755 67777777654 888888643
No 269
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=26.32 E-value=5.6e+02 Score=29.74 Aligned_cols=98 Identities=10% Similarity=0.039 Sum_probs=65.7
Q ss_pred cCCceEEEE-c--cCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--ccHHHHHHHHHHhcCeeecCC
Q 039837 49 YADKVAFVE-A--VSG----KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNV--AEYGIVALGIMAAGGVFSGAN 119 (544)
Q Consensus 49 ~p~~~a~~~-~--~~~----~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~ 119 (544)
.|+.++++- . .+| -.+|.+.+...+...... .+++++|++...+|-. ..+...++..+..|...+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAAR---IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHh---hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 456777542 2 112 357999887766655543 4678999998887743 233345666778898887776
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchHHHh
Q 039837 120 PTAHASELKKQVDAADAKLIVSYAPIYEKV 149 (544)
Q Consensus 120 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 149 (544)
.....+.+.+.+.+.++..+...+.....+
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 897 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGY 897 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHH
Confidence 555666778888999999988776655443
No 270
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.21 E-value=2.3e+02 Score=28.94 Aligned_cols=88 Identities=9% Similarity=-0.047 Sum_probs=63.2
Q ss_pred ceeeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCce
Q 039837 199 KGVMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVT 276 (544)
Q Consensus 199 KgV~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t 276 (544)
.+..+|.+.+...+..+...+.. +...++++...++-...+ ...+++++..|+..+..+. .....+...+++.+++
T Consensus 8 ~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~ 85 (502)
T PRK08276 8 SGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEF--FEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAK 85 (502)
T ss_pred CCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCC
Confidence 34457777777666555544422 667888888887776543 3567889999999998764 5678888888999999
Q ss_pred eeecchHHHHHH
Q 039837 277 FAPIVPPIILSL 288 (544)
Q Consensus 277 ~~~~~P~~~~~l 288 (544)
.++..+.....+
T Consensus 86 ~ii~~~~~~~~~ 97 (502)
T PRK08276 86 VLIVSAALADTA 97 (502)
T ss_pred EEEEccchhhHH
Confidence 888877655544
No 271
>PRK13382 acyl-CoA synthetase; Provisional
Probab=26.18 E-value=2.8e+02 Score=28.77 Aligned_cols=82 Identities=12% Similarity=-0.016 Sum_probs=60.3
Q ss_pred eccHHHHHHHHHhhccccC-CcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVV-PEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|...+...+..+...+. .+..+++++...++-... +...+++++..|+.++..++ ....++...+++.+++.++
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 145 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG--FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVI 145 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH--HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEE
Confidence 5777777776665555442 266788888887776553 44678899999999998764 5678888899999999887
Q ss_pred cchHHH
Q 039837 280 IVPPII 285 (544)
Q Consensus 280 ~~P~~~ 285 (544)
......
T Consensus 146 ~~~~~~ 151 (537)
T PRK13382 146 YDEEFS 151 (537)
T ss_pred EchhhH
Confidence 765543
No 272
>PLN03013 cysteine synthase
Probab=26.10 E-value=3.9e+02 Score=26.94 Aligned_cols=65 Identities=17% Similarity=0.110 Sum_probs=44.5
Q ss_pred HHHcC-CCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccc
Q 039837 80 LRSLG-LRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAP 144 (544)
Q Consensus 80 L~~~G-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 144 (544)
..+.| +++|....+....+-.-+.+-++|...|..++.+-|...+.+....++..++++++++..
T Consensus 165 a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 165 AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 33455 578855445555555566666677788987665555555667788889999999998643
No 273
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.09 E-value=2.6e+02 Score=29.81 Aligned_cols=84 Identities=11% Similarity=-0.163 Sum_probs=59.9
Q ss_pred eeccHHHHHHHHHhhccccCCcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEc-CccC---HHHHHHHHHHcCce
Q 039837 201 VMLTHRNLVANLCSTLFSVVPEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMM-NRFE---LRAFLDALITHEVT 276 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~---~~~~~~~i~~~~~t 276 (544)
..+|++.+...+..+...+.....+++++...++-... +...+++++..|+.++.. +... ..++...++..++.
T Consensus 54 ~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 131 (631)
T PRK07769 54 RDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLD--YLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPS 131 (631)
T ss_pred eEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChH--HHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCC
Confidence 45788888887777666553335678888877777653 345678899999988865 3222 46788888999999
Q ss_pred eeecchHHHH
Q 039837 277 FAPIVPPIIL 286 (544)
Q Consensus 277 ~~~~~P~~~~ 286 (544)
.+++......
T Consensus 132 ~vi~~~~~~~ 141 (631)
T PRK07769 132 AILTTTDSAE 141 (631)
T ss_pred EEEEChHHHH
Confidence 8888765543
No 274
>PLN00011 cysteine synthase
Probab=25.95 E-value=4.2e+02 Score=25.42 Aligned_cols=64 Identities=16% Similarity=0.005 Sum_probs=43.5
Q ss_pred HHHcC-CCCC-CEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccc
Q 039837 80 LRSLG-LRKG-QVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAP 144 (544)
Q Consensus 80 L~~~G-i~~g-d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 144 (544)
..+.| +.+| +.|.. ...+-.-..+-+++...|..+..+-|...+......++..+++++++...
T Consensus 59 a~~~g~~~~g~~~vv~-aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 59 AEDKGLITPGKSTLIE-ATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHcCCCCCCCcEEEE-eCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33444 6777 56654 55555566666778889987665555444567778899999999988753
No 275
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=25.86 E-value=2.2e+02 Score=24.72 Aligned_cols=61 Identities=16% Similarity=0.042 Sum_probs=41.1
Q ss_pred CCCHHHHHHhhhhhcCCceEEEEccCC--ceeeHH--HHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 039837 35 NVTLPDFVLQDAELYADKVAFVEAVSG--KAYTYA--QVARDTRGFAKALRSLGLRKGQVVIVVLP 96 (544)
Q Consensus 35 ~~~l~~~l~~~a~~~p~~~a~~~~~~~--~~~Ty~--el~~~~~~la~~L~~~Gi~~gd~V~i~~~ 96 (544)
.....+.+.+..+.+|....++.+..+ ++=.|. ==.+|++.++.+|.+.|+.++ +|.+..-
T Consensus 98 ~~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~G~ 162 (190)
T COG2885 98 AQATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTVGY 162 (190)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEEEc
Confidence 344556666777788877777765433 233343 234689999999999998777 7666543
No 276
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=25.81 E-value=5.5e+02 Score=30.33 Aligned_cols=98 Identities=10% Similarity=0.080 Sum_probs=67.4
Q ss_pred cCCceEEE-Ec--cCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHH-HHHHHHHhcCeeecCCC
Q 039837 49 YADKVAFV-EA--VSG----KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGI-VALGIMAAGGVFSGANP 120 (544)
Q Consensus 49 ~p~~~a~~-~~--~~~----~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~-~~lA~~~~G~~~v~l~~ 120 (544)
.|+.+|++ +. .+| -.+|.+.+........ ...+++++|++....+-+.+.-+ -+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 46667754 22 112 3578888766554332 34578999999988887655433 46777788998887665
Q ss_pred --CCCHHHHHHHHHhcCceEEEeccchHHHh
Q 039837 121 --TAHASELKKQVDAADAKLIVSYAPIYEKV 149 (544)
Q Consensus 121 --~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 149 (544)
...++.+...+++.++.++...+..+..+
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l 703 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAF 703 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHH
Confidence 35678899999999999998877655443
No 277
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.43 E-value=2.8e+02 Score=28.85 Aligned_cols=83 Identities=10% Similarity=-0.141 Sum_probs=59.2
Q ss_pred eccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|+..+...+..+...+.. ++..++++...++-... +...+++++..|+..+..+. .....+...+++.++..++
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~--~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii 119 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTE--FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVV 119 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEE
Confidence 57888887766555443321 56677888777665543 34678889999999998764 5778888889999998888
Q ss_pred cchHHHH
Q 039837 280 IVPPIIL 286 (544)
Q Consensus 280 ~~P~~~~ 286 (544)
..+....
T Consensus 120 ~~~~~~~ 126 (542)
T PRK07786 120 TEAALAP 126 (542)
T ss_pred EccchHH
Confidence 7765443
No 278
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=25.24 E-value=2.8e+02 Score=29.89 Aligned_cols=86 Identities=9% Similarity=-0.149 Sum_probs=63.5
Q ss_pred eccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|.+.+...+..+...+.. ++..++++...++-..- +....++++..|+..+... ...++++...+...++++++
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~ 153 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQ--WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVF 153 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEE
Confidence 46888888877666654432 67888888877776553 3456788899999888765 56788899999999999999
Q ss_pred cchHHHHHHh
Q 039837 280 IVPPIILSLV 289 (544)
Q Consensus 280 ~~P~~~~~l~ 289 (544)
+....+..++
T Consensus 154 ~~~~~~~~~~ 163 (660)
T PLN02430 154 VQDKKIKELL 163 (660)
T ss_pred ECHHHHHHHH
Confidence 8766544433
No 279
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=25.11 E-value=7e+02 Score=25.71 Aligned_cols=90 Identities=18% Similarity=0.105 Sum_probs=58.0
Q ss_pred cCCceEEEEccCC-------ceeeHHHHHHHHHHHHHHHHHcCCC-CCCEEEEEcCCCc-cHHHHHHHHHHhcCeeecCC
Q 039837 49 YADKVAFVEAVSG-------KAYTYAQVARDTRGFAKALRSLGLR-KGQVVIVVLPNVA-EYGIVALGIMAAGGVFSGAN 119 (544)
Q Consensus 49 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~Gi~-~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~ 119 (544)
.++.+|++.-.+| -.+|++.+...+..++.. .++. ++|++...+|-.. ..+..+++.+..|+..+..+
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 4566776521112 358999888777655543 3667 8899888887443 22345677788898877655
Q ss_pred C-CC--CHHHHHHHHHhcCceEEEe
Q 039837 120 P-TA--HASELKKQVDAADAKLIVS 141 (544)
Q Consensus 120 ~-~~--~~~~l~~~l~~~~~~~ii~ 141 (544)
. .. .+..+...+.+.++.++.+
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 3 12 4556778888888886643
No 280
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.96 E-value=2.3e+02 Score=29.55 Aligned_cols=82 Identities=16% Similarity=0.046 Sum_probs=61.2
Q ss_pred eeccHHHHHHHHHhhccccC--CcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCcee
Q 039837 201 VMLTHRNLVANLCSTLFSVV--PEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTF 277 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~ 277 (544)
..+|...+...+..+...+. .+...++++....+-.. .+...+++++..|+..+..++ .....+...+++.+++.
T Consensus 47 ~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 124 (560)
T PRK08974 47 EVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLL--QYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKA 124 (560)
T ss_pred ccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceE
Confidence 36788888777766666552 26778888887766554 344677889999999998764 57788889999999999
Q ss_pred eecchHH
Q 039837 278 APIVPPI 284 (544)
Q Consensus 278 ~~~~P~~ 284 (544)
+.+.+..
T Consensus 125 ii~~~~~ 131 (560)
T PRK08974 125 IVIVSNF 131 (560)
T ss_pred EEEeccc
Confidence 8876543
No 281
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=24.87 E-value=2.4e+02 Score=21.66 Aligned_cols=48 Identities=10% Similarity=0.003 Sum_probs=32.8
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeec
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSG 117 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 117 (544)
.+.+.++.+ .+...+..+.+.|.++|.++..+..+...+...|..-+-
T Consensus 42 niP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~ 89 (104)
T PRK10287 42 NIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAE 89 (104)
T ss_pred ECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEE
Confidence 456665443 344455556678999998888777777777788876553
No 282
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=24.40 E-value=1.1e+02 Score=28.73 Aligned_cols=55 Identities=16% Similarity=0.228 Sum_probs=44.8
Q ss_pred ceeeHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeee
Q 039837 62 KAYTYAQVARD------TRGFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFS 116 (544)
Q Consensus 62 ~~~Ty~el~~~------~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 116 (544)
..+.|.++.+. .+.++..+...|+.+.+.|.++|..+....+.++|+-.+|...+
T Consensus 202 iNipw~~~~~~~~~~~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 202 INIPWTDLVDDGGLFKSPEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred cCcCHHHHhcCCCccCcHHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 46788888872 23444445578999999999999999999999999999998765
No 283
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=24.32 E-value=6.5e+02 Score=24.29 Aligned_cols=52 Identities=23% Similarity=0.303 Sum_probs=22.6
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCC----CCHHHHHHHHHhcCceEEE
Q 039837 86 RKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPT----AHASELKKQVDAADAKLIV 140 (544)
Q Consensus 86 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~ii 140 (544)
++||.|++..|. +.....++...|+..+.++.+ ...+.+...+...++++++
T Consensus 98 ~~gd~Vlv~~p~---y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~ 153 (351)
T PRK14807 98 NKGDVVIYPHPS---FAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVF 153 (351)
T ss_pred CCCCEEEEeCCC---hHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEE
Confidence 466666554332 222223334455544443321 3344555555443445444
No 284
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=24.21 E-value=2.9e+02 Score=27.91 Aligned_cols=24 Identities=21% Similarity=0.117 Sum_probs=10.9
Q ss_pred HHhcCeeecCCCCCCHHHHHHHHH
Q 039837 109 MAAGGVFSGANPTAHASELKKQVD 132 (544)
Q Consensus 109 ~~~G~~~v~l~~~~~~~~l~~~l~ 132 (544)
.+.|+.+..++...+.+.++..++
T Consensus 122 ~~~Gi~v~~vd~~~d~~~l~~~I~ 145 (432)
T PRK06702 122 RKLGIDVTFFNPNLTADEIVALAN 145 (432)
T ss_pred HHCCCEEEEECCCCCHHHHHHhCC
Confidence 344554444444444444444443
No 285
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=24.16 E-value=1.1e+02 Score=21.74 Aligned_cols=32 Identities=19% Similarity=0.268 Sum_probs=24.6
Q ss_pred CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 039837 61 GKAYTYAQVARDTRGFAKALRSLGLRKGQVVIV 93 (544)
Q Consensus 61 ~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i 93 (544)
++.+|.++|.+.++++.+++++.|. .-.+|.+
T Consensus 28 g~~l~~~~l~~~~~~l~~~y~~~GY-~~s~v~~ 59 (76)
T PF08479_consen 28 GRCLTLADLQQLADALTNYYREKGY-ITSRVYL 59 (76)
T ss_dssp TSBB-HHHHHHHHHHHHHHHHHTT--TT-EEEE
T ss_pred CCCcCHHHHHHHHHHHHHHHHHcCc-eEEEEEe
Confidence 7899999999999999999999985 3344444
No 286
>PRK12582 acyl-CoA synthetase; Provisional
Probab=24.08 E-value=2e+02 Score=30.65 Aligned_cols=80 Identities=4% Similarity=-0.188 Sum_probs=58.7
Q ss_pred eeccHHHHHHHHHhhccccC-CcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCcc-C-----HHHHHHHHHHc
Q 039837 201 VMLTHRNLVANLCSTLFSVV-PEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNRF-E-----LRAFLDALITH 273 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~-~-----~~~~~~~i~~~ 273 (544)
-.+|++.+...+..+...+. .+..+++++...++-.. .+...+++++..|+..+..++. . ..++...++..
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~ 156 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI--EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLV 156 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH--HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhc
Confidence 46899988887766665442 26778899988888554 3446778899999999887643 3 37888888888
Q ss_pred Cceeeecch
Q 039837 274 EVTFAPIVP 282 (544)
Q Consensus 274 ~~t~~~~~P 282 (544)
++..++...
T Consensus 157 ~~~~vi~~~ 165 (624)
T PRK12582 157 KPRVVFAQS 165 (624)
T ss_pred CCcEEEecC
Confidence 888877643
No 287
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=24.03 E-value=3e+02 Score=29.88 Aligned_cols=89 Identities=8% Similarity=-0.108 Sum_probs=65.9
Q ss_pred ceeeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCce
Q 039837 199 KGVMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVT 276 (544)
Q Consensus 199 KgV~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t 276 (544)
....+|++.+...+..+...+.. +..+++++...++-.. .+....++++..|+..+... ...++++...+++.++.
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~ 195 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW--EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECK 195 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCcc
Confidence 35678999988887776655432 6788888888777654 44467788888998887654 56788888889999999
Q ss_pred eeecchHHHHHHh
Q 039837 277 FAPIVPPIILSLV 289 (544)
Q Consensus 277 ~~~~~P~~~~~l~ 289 (544)
.+++....+..+.
T Consensus 196 ~lv~~~~~~~~l~ 208 (700)
T PTZ00216 196 AIVCNGKNVPNLL 208 (700)
T ss_pred EEEECHHHHHHHH
Confidence 9988776555443
No 288
>PLN02479 acetate-CoA ligase
Probab=23.96 E-value=3.2e+02 Score=28.65 Aligned_cols=82 Identities=7% Similarity=-0.083 Sum_probs=62.2
Q ss_pred eccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|...+...+..+...+.. +..+++++...++-... +...+++++..|+..+..++ ....++...+++.++..++
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPA--MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVM 122 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH--HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEE
Confidence 57888888777666655532 67888888887776553 33567889999999888764 5678899999999999998
Q ss_pred cchHHH
Q 039837 280 IVPPII 285 (544)
Q Consensus 280 ~~P~~~ 285 (544)
..+..+
T Consensus 123 ~~~~~~ 128 (567)
T PLN02479 123 VDQEFF 128 (567)
T ss_pred Echhhh
Confidence 876654
No 289
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.92 E-value=2.1e+02 Score=29.82 Aligned_cols=85 Identities=14% Similarity=0.228 Sum_probs=58.0
Q ss_pred eeeHHHHHHHHHHHHHHH-HHcCCCCCCEEEEEcCCCc-cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEE
Q 039837 63 AYTYAQVARDTRGFAKAL-RSLGLRKGQVVIVVLPNVA-EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIV 140 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L-~~~Gi~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 140 (544)
.+|...+...+ .+..+ ...++.++|++..+++-.- ......++.+..|+..+...+...++.+..++++.++..+.
T Consensus 195 ~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~ 272 (539)
T PRK07008 195 LYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSA 272 (539)
T ss_pred EEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEE
Confidence 46776664322 22222 2347889999887776432 22333467788999888777778889999999999999988
Q ss_pred eccchHHHh
Q 039837 141 SYAPIYEKV 149 (544)
Q Consensus 141 ~~~~~~~~~ 149 (544)
..+..+..+
T Consensus 273 ~~P~~~~~l 281 (539)
T PRK07008 273 GVPTVWLGL 281 (539)
T ss_pred echHHHHHH
Confidence 777665544
No 290
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=23.74 E-value=4.9e+02 Score=26.27 Aligned_cols=30 Identities=10% Similarity=0.049 Sum_probs=17.2
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHHhcCeeec
Q 039837 87 KGQVVIVVLPNVAEYGIVALGIMAAGGVFSG 117 (544)
Q Consensus 87 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 117 (544)
.|.+|+|..+....+-.+-+ +...|..++.
T Consensus 302 ~gkrv~i~g~~~~~~~la~~-L~elGm~v~~ 331 (435)
T cd01974 302 HGKKFALYGDPDFLIGLTSF-LLELGMEPVH 331 (435)
T ss_pred CCCEEEEEcChHHHHHHHHH-HHHCCCEEEE
Confidence 47788888765443333222 2367877643
No 291
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=23.67 E-value=4.1e+02 Score=21.70 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=35.2
Q ss_pred HHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEecc
Q 039837 102 GIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYA 143 (544)
Q Consensus 102 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 143 (544)
.+....+-..|.-++.+-.+.+.+++...+.+.+|++|..+.
T Consensus 21 ~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 21 KILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 344445557799999999999999999999999999998764
No 292
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=23.62 E-value=1.5e+02 Score=30.00 Aligned_cols=72 Identities=14% Similarity=0.206 Sum_probs=49.8
Q ss_pred HHHHHcCCCCCCEEEEEcCCCc-cHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccchHHHh
Q 039837 78 KALRSLGLRKGQVVIVVLPNVA-EYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAPIYEKV 149 (544)
Q Consensus 78 ~~L~~~Gi~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 149 (544)
.++.-.|..+...|.+.-|+-. ..+.+=+-=+..-++++|++.++.-+++..++...+|++++|.+..-...
T Consensus 408 h~~e~~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeaytqp~ 480 (653)
T KOG1138|consen 408 HFLECWGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAYTQPI 480 (653)
T ss_pred HHHHHhcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhhcCCC
Confidence 3444457777777766655322 22222222334567899999999999999999999999999987754443
No 293
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=23.60 E-value=1.9e+02 Score=25.18 Aligned_cols=22 Identities=14% Similarity=0.131 Sum_probs=19.8
Q ss_pred ceeeHHHHHHHHHHHHHHHHHc
Q 039837 62 KAYTYAQVARDTRGFAKALRSL 83 (544)
Q Consensus 62 ~~~Ty~el~~~~~~la~~L~~~ 83 (544)
.-+||.|+.+++.++|..+.+.
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~ 31 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASD 31 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHH
Confidence 3589999999999999999875
No 294
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=23.50 E-value=5e+02 Score=24.53 Aligned_cols=64 Identities=23% Similarity=0.187 Sum_probs=42.0
Q ss_pred HHHcC-CCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEeccc
Q 039837 80 LRSLG-LRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYAP 144 (544)
Q Consensus 80 L~~~G-i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 144 (544)
+.+.| +.+|+.|. ....+-.-..+-+++...|..++.+-|...+......++..+++++++..+
T Consensus 49 a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 49 AEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 44445 46778774 444445555555677788987665555544455667889999999987643
No 295
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=23.08 E-value=5.2e+02 Score=22.69 Aligned_cols=83 Identities=13% Similarity=0.039 Sum_probs=56.1
Q ss_pred CceeeHHHHHHHHHHHHHHHHHc-------CCCCCCEEEEEcCCC-cc---HHHHHHHHHHhcCeeecCCCCCCHHHHHH
Q 039837 61 GKAYTYAQVARDTRGFAKALRSL-------GLRKGQVVIVVLPNV-AE---YGIVALGIMAAGGVFSGANPTAHASELKK 129 (544)
Q Consensus 61 ~~~~Ty~el~~~~~~la~~L~~~-------Gi~~gd~V~i~~~n~-~~---~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 129 (544)
...++..|.+-.++.+-..+... +-..+-+|.+.+..+ .+ ..++-..+-..|.-++.+-.+.+.+++..
T Consensus 48 ~~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~ 127 (201)
T cd02070 48 EGEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVE 127 (201)
T ss_pred cCCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 45788888888777666654322 211234666555543 22 22333334457888888999999999999
Q ss_pred HHHhcCceEEEecc
Q 039837 130 QVDAADAKLIVSYA 143 (544)
Q Consensus 130 ~l~~~~~~~ii~~~ 143 (544)
.+.+.+|++|..+-
T Consensus 128 ~~~~~~~d~v~lS~ 141 (201)
T cd02070 128 AVKEHKPDILGLSA 141 (201)
T ss_pred HHHHcCCCEEEEec
Confidence 99999999988654
No 296
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=22.75 E-value=2.2e+02 Score=30.78 Aligned_cols=57 Identities=16% Similarity=0.138 Sum_probs=40.3
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCC---------C-----HHHHHHHHHhc-Cce----EEEeccc
Q 039837 85 LRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTA---------H-----ASELKKQVDAA-DAK----LIVSYAP 144 (544)
Q Consensus 85 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~ii~~~~ 144 (544)
+++||.|. +-.|+--++.. |+..+|+.+|.+.|.. + .+.++..++.. +++ ++|+.+.
T Consensus 232 ~~~Gd~VL-vdRN~HKSv~h--aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT 307 (714)
T PRK15400 232 APAGSTVL-IDRNCHKSLTH--LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST 307 (714)
T ss_pred cCCCCEEE-eecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC
Confidence 57899885 56666666444 9999999999998863 3 67788887654 333 6665543
No 297
>PRK06060 acyl-CoA synthetase; Validated
Probab=22.73 E-value=3e+02 Score=29.90 Aligned_cols=81 Identities=11% Similarity=-0.025 Sum_probs=59.4
Q ss_pred eccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|++.+...+..+...+.. +...++++...++-...+ ...++.++..|+..+..++ ....++...+++.++.+++
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~--~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi 107 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDL--VQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVV 107 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEE
Confidence 47888887776666554432 677889888887776643 3567889999998887764 5677788888888888887
Q ss_pred cchHH
Q 039837 280 IVPPI 284 (544)
Q Consensus 280 ~~P~~ 284 (544)
+....
T Consensus 108 ~~~~~ 112 (705)
T PRK06060 108 TSDAL 112 (705)
T ss_pred EchHH
Confidence 65543
No 298
>PRK13391 acyl-CoA synthetase; Provisional
Probab=22.68 E-value=3.1e+02 Score=28.20 Aligned_cols=83 Identities=10% Similarity=-0.070 Sum_probs=60.8
Q ss_pred eccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|...+...+..+...+.. +..+++++...++-...+ ...+++++..|+.++..+. .....+...+++.++..++
T Consensus 24 ~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~--~~~~~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li 101 (511)
T PRK13391 24 VVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY--LEVCWAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALI 101 (511)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhccEEeccccccCHHHHHHHHhccCCcEEE
Confidence 47888887776665554432 567788887777776543 3567889999999997764 5778888999999999988
Q ss_pred cchHHHH
Q 039837 280 IVPPIIL 286 (544)
Q Consensus 280 ~~P~~~~ 286 (544)
+.+....
T Consensus 102 ~~~~~~~ 108 (511)
T PRK13391 102 TSAAKLD 108 (511)
T ss_pred EchhhHH
Confidence 8776543
No 299
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=22.61 E-value=5.5e+02 Score=22.86 Aligned_cols=84 Identities=10% Similarity=0.014 Sum_probs=56.8
Q ss_pred CceeeHHHHHHHHHHHHHHHH-------HcC-C-CCCCEEEEEcCCC----ccHHHHHHHHHHhcCeeecCCCCCCHHHH
Q 039837 61 GKAYTYAQVARDTRGFAKALR-------SLG-L-RKGQVVIVVLPNV----AEYGIVALGIMAAGGVFSGANPTAHASEL 127 (544)
Q Consensus 61 ~~~~Ty~el~~~~~~la~~L~-------~~G-i-~~gd~V~i~~~n~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 127 (544)
..++|-.|++..++.+...|. ... - ...-+|.+.+..+ +-..++-..+-..|.-++.+-.+.+.+++
T Consensus 52 ~gei~vaqe~~as~~~~~~l~~l~~~l~~~~~~~~~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~ 131 (213)
T cd02069 52 AGKMFLPQVLKSARVMKAAVAYLEPYMEKEKGENSSKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKI 131 (213)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHH
Confidence 467888888777666665442 222 1 1233566666554 22333334444579999999999999999
Q ss_pred HHHHHhcCceEEEeccc
Q 039837 128 KKQVDAADAKLIVSYAP 144 (544)
Q Consensus 128 ~~~l~~~~~~~ii~~~~ 144 (544)
...+.+.+|++|..+-.
T Consensus 132 v~~~~~~~~~~V~lS~~ 148 (213)
T cd02069 132 LEAAKEHKADIIGLSGL 148 (213)
T ss_pred HHHHHHcCCCEEEEccc
Confidence 99999999999987643
No 300
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=22.29 E-value=96 Score=17.32 Aligned_cols=21 Identities=29% Similarity=0.279 Sum_probs=16.4
Q ss_pred cCCCCCCcccchHHHHHHHHH
Q 039837 520 GIPKSHSGKIMRRILKDKMLE 540 (544)
Q Consensus 520 ~~P~t~~GKi~r~~l~~~~~~ 540 (544)
.+-++.+|+|++.+++..+.+
T Consensus 8 ~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 8 EFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHSTTSSSEEEHHHHHHHHHH
T ss_pred HHCCCCCCcCCHHHHHHHHHh
Confidence 345678999999999887753
No 301
>PRK13390 acyl-CoA synthetase; Provisional
Probab=22.11 E-value=2.8e+02 Score=28.35 Aligned_cols=81 Identities=9% Similarity=-0.114 Sum_probs=59.6
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcC-ccCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMN-RFELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 278 (544)
..+|.+.+...+..+...+.. +...++++...++-... +...+++++..|+..+..+ ...+..+...++..+++.+
T Consensus 23 ~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~--~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~ 100 (501)
T PRK13390 23 EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPE--ALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVL 100 (501)
T ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEE
Confidence 468888888777766655432 67788888877776654 3467788999999888766 4577888888888888887
Q ss_pred ecchH
Q 039837 279 PIVPP 283 (544)
Q Consensus 279 ~~~P~ 283 (544)
.....
T Consensus 101 i~~~~ 105 (501)
T PRK13390 101 VASAA 105 (501)
T ss_pred EEcch
Confidence 66543
No 302
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=22.04 E-value=6.2e+02 Score=25.78 Aligned_cols=68 Identities=18% Similarity=0.316 Sum_probs=42.2
Q ss_pred ceeeHHHHHHHHHHH--------------HHHH-HHcCCCCCCEEEEEcCCCccHHHHHHH-HHHhcCeeecC-------
Q 039837 62 KAYTYAQVARDTRGF--------------AKAL-RSLGLRKGQVVIVVLPNVAEYGIVALG-IMAAGGVFSGA------- 118 (544)
Q Consensus 62 ~~~Ty~el~~~~~~l--------------a~~L-~~~Gi~~gd~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l------- 118 (544)
..=||.+|.+.+..+ |..| ...++++||.| + +..++...-| +...|++++=+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V----p-~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV----P-GNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE----C-CccchHhhHHHHHhCCcEEEeeecccccc
Confidence 344677776665433 3232 34589999965 3 3334444444 78888877633
Q ss_pred -------CCCCCHHHHHHHHHhc
Q 039837 119 -------NPTAHASELKKQVDAA 134 (544)
Q Consensus 119 -------~~~~~~~~l~~~l~~~ 134 (544)
.-+.+.+.++..++..
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~ 173 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEV 173 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhccc
Confidence 3457788999988754
No 303
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=21.96 E-value=6.4e+02 Score=30.10 Aligned_cols=98 Identities=10% Similarity=-0.016 Sum_probs=65.5
Q ss_pred cCCceEEE-Ec--cCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-HHHHHHHHHHhcCeeecCCC
Q 039837 49 YADKVAFV-EA--VSG----KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAE-YGIVALGIMAAGGVFSGANP 120 (544)
Q Consensus 49 ~p~~~a~~-~~--~~~----~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 120 (544)
.|+.+|++ +. .+| -.+|.+.+...+..+.. ..++.++|++...++-+.+ .+..+++.+..|+..+..+.
T Consensus 413 ~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~ 489 (1389)
T TIGR03443 413 GPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAK---RFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTA 489 (1389)
T ss_pred CCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcCh
Confidence 35667754 32 112 35788888766544433 3478899999887764433 33456778888988776554
Q ss_pred C--CCHHHHHHHHHhcCceEEEeccchHHHh
Q 039837 121 T--AHASELKKQVDAADAKLIVSYAPIYEKV 149 (544)
Q Consensus 121 ~--~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 149 (544)
. ..+..+...+++.++.++...+.....+
T Consensus 490 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l 520 (1389)
T TIGR03443 490 DDIGTPGRLAEWMAKYGATVTHLTPAMGQLL 520 (1389)
T ss_pred hhccCHHHHHHHHHHhCCeEEEeCHHHHHHH
Confidence 3 3467888999999999998777665544
No 304
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=21.88 E-value=3.5e+02 Score=21.13 Aligned_cols=36 Identities=17% Similarity=0.076 Sum_probs=30.4
Q ss_pred HHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEecc
Q 039837 108 IMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYA 143 (544)
Q Consensus 108 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 143 (544)
+-..|.-++.+.++.+.+++...+.+.+|++|..+-
T Consensus 23 l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 23 LRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 334688888889999999999999999999988653
No 305
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=21.84 E-value=8.9e+02 Score=24.97 Aligned_cols=96 Identities=11% Similarity=0.143 Sum_probs=63.7
Q ss_pred cCCceEEE-Ec--cCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--cHHHHHHHHHHhcCeeecCC
Q 039837 49 YADKVAFV-EA--VSG----KAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVA--EYGIVALGIMAAGGVFSGAN 119 (544)
Q Consensus 49 ~p~~~a~~-~~--~~~----~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~ 119 (544)
.++.+|++ +. .+| -.+|++.+...+.... ...+++.+|++...++-.. .++..++..+..|...+. .
T Consensus 193 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~-~ 268 (538)
T TIGR03208 193 SPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVL-Q 268 (538)
T ss_pred CCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEe-c
Confidence 45677754 22 112 3578887766555443 3346788999988887543 234456666777887664 4
Q ss_pred CCCCHHHHHHHHHhcCceEEEeccchHHH
Q 039837 120 PTAHASELKKQVDAADAKLIVSYAPIYEK 148 (544)
Q Consensus 120 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 148 (544)
+...+..+...+++.++..+......+..
T Consensus 269 ~~~~~~~~~~~l~~~~vt~~~~~p~~~~~ 297 (538)
T TIGR03208 269 DIWNPARAAELIRETGVTFTMASTPFLTD 297 (538)
T ss_pred CccCHHHHHHHHHHhCCeEEecCHHHHHH
Confidence 56778889999999999998876665544
No 306
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=21.84 E-value=2.5e+02 Score=23.58 Aligned_cols=38 Identities=24% Similarity=0.237 Sum_probs=27.1
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHH
Q 039837 63 AYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYG 102 (544)
Q Consensus 63 ~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~ 102 (544)
-+||.|+.+.++++|..+.+.| .-|.|.-....+.-+.
T Consensus 9 ~is~~~i~~~i~~la~~I~~~~--~~d~vvgv~~GG~~fa 46 (156)
T PRK09177 9 PVSWDQLHRDARALAWRLLPAG--QWKGIIAVTRGGLVPA 46 (156)
T ss_pred EcCHHHHHHHHHHHHHHHHhhC--CCCEEEEEecCCeehH
Confidence 4799999999999999998764 2355554444444333
No 307
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=21.80 E-value=1.3e+02 Score=24.47 Aligned_cols=47 Identities=17% Similarity=0.068 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeeecch
Q 039837 236 FHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAPIVP 282 (544)
Q Consensus 236 ~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P 282 (544)
.|..|.-......-..|-.++-... .+++++++...+++++.+....
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~ 60 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSS 60 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 3555543333333456777777664 5789999999999998875443
No 308
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=21.54 E-value=2.6e+02 Score=20.31 Aligned_cols=40 Identities=25% Similarity=0.232 Sum_probs=28.9
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCe
Q 039837 75 GFAKALRSLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGV 114 (544)
Q Consensus 75 ~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 114 (544)
.+...+...++.+++.|.++|.++.....+...+...|..
T Consensus 43 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 3444555667888888989988777776666777777765
No 309
>PF00682 HMGL-like: HMGL-like of this family is not conserved in other members. are a sub-families of this Pfam.; InterPro: IPR000891 Pyruvate carboxylase (6.4.1.1 from EC) (PC), a member of the biotin-dependent enzyme family, is involved in the gluconeogenesis by mediating the carboxylation of pyruvate to oxaloacetate. Biotin-dependent carboxylase enzymes perform a two step reaction. Enzyme-bound biotin is first carboxylated by bicarbonate and ATP and the carboxyl group temporarily bound to biotin is subsequently transferred to an acceptor substrate such as pyruvate []. PC has three functional domains: a biotin carboxylase (BC) domain, a carboxyltransferase (CT) domain which perform the second part of the reaction and a biotinyl domain [, ]. The mechanism by which the carboxyl group is transferred from the carboxybiotin to the pyruvate is not well understood. The pyruvate carboxyltransferase domain is also found in other pyruvate binding enzymes and acetyl-CoA dependent enzymes suggesting that this domain can be associated with different enzymatic activities. This domain is found towards the N-terminal region of various aldolase enzymes. This N-terminal TIM barrel domain [] interacts with the C-terminal domain. The C-terminal DmpG_comm domain (IPR012425 from INTERPRO) is thought to promote heterodimerisation with members of IPR003361 from INTERPRO to form a bifunctional aldolase-dehydrogenase []. ; GO: 0003824 catalytic activity; PDB: 3MP5_E 3MP3_E 2CW6_E 3MP4_D 3HBL_A 3HB9_C 3HO8_A 3BG5_C 1YDN_B 3RMJ_A ....
Probab=21.47 E-value=3.6e+02 Score=24.35 Aligned_cols=70 Identities=21% Similarity=0.100 Sum_probs=42.9
Q ss_pred HHHHHhhhhhcCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHH-HHHHHHhcCeee
Q 039837 39 PDFVLQDAELYADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIV-ALGIMAAGGVFS 116 (544)
Q Consensus 39 ~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~-~lA~~~~G~~~v 116 (544)
.+......+.-++.+.+.|. .+..+=.++.+.+..+.+.+. .-.+.+++-|+..+.++ .++++.+|+..+
T Consensus 140 ~~~~~~~~~~g~~~i~l~Dt--~G~~~P~~v~~lv~~~~~~~~------~~~l~~H~Hnd~Gla~An~laA~~aGa~~i 210 (237)
T PF00682_consen 140 LELAEALAEAGADIIYLADT--VGIMTPEDVAELVRALREALP------DIPLGFHAHNDLGLAVANALAALEAGADRI 210 (237)
T ss_dssp HHHHHHHHHHT-SEEEEEET--TS-S-HHHHHHHHHHHHHHST------TSEEEEEEBBTTS-HHHHHHHHHHTT-SEE
T ss_pred HHHHHHHHHcCCeEEEeeCc--cCCcCHHHHHHHHHHHHHhcc------CCeEEEEecCCccchhHHHHHHHHcCCCEE
Confidence 34444444456777777776 456666666666654444432 26899999988766555 888899998775
No 310
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=21.43 E-value=2.5e+02 Score=23.79 Aligned_cols=20 Identities=15% Similarity=0.092 Sum_probs=18.6
Q ss_pred eeHHHHHHHHHHHHHHHHHc
Q 039837 64 YTYAQVARDTRGFAKALRSL 83 (544)
Q Consensus 64 ~Ty~el~~~~~~la~~L~~~ 83 (544)
+||.|+.+++.++|..+.+.
T Consensus 3 is~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED 22 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999875
No 311
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=21.42 E-value=2.3e+02 Score=30.15 Aligned_cols=81 Identities=6% Similarity=-0.108 Sum_probs=60.0
Q ss_pred eeeccHHHHHHHHHhhccccC-CcccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cC-----HHHHHHHHHH
Q 039837 200 GVMLTHRNLVANLCSTLFSVV-PEMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FE-----LRAFLDALIT 272 (544)
Q Consensus 200 gV~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~-----~~~~~~~i~~ 272 (544)
...+|++.+...+..+...+. .+..+++++...++-..- +...+++++..|+.++..++ +. ..++...+++
T Consensus 67 ~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~ 144 (614)
T PRK08180 67 WRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIE--HALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLEL 144 (614)
T ss_pred eeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHH--HHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhc
Confidence 356799998887776665543 267788888888777654 34577889999999998764 33 5788888888
Q ss_pred cCceeeecch
Q 039837 273 HEVTFAPIVP 282 (544)
Q Consensus 273 ~~~t~~~~~P 282 (544)
.++..+++..
T Consensus 145 ~~~~~li~~~ 154 (614)
T PRK08180 145 LTPGLVFADD 154 (614)
T ss_pred CCCcEEEEcC
Confidence 8888887653
No 312
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=21.35 E-value=2.6e+02 Score=29.23 Aligned_cols=82 Identities=12% Similarity=-0.036 Sum_probs=59.9
Q ss_pred eccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceeee
Q 039837 202 MLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFAP 279 (544)
Q Consensus 202 ~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~ 279 (544)
.+|.+.+...+..+...+.. ++..++++...++-...+ ...+++++..|+..+..++ +...++...++..+++.++
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii 126 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA--VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVIL 126 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEE
Confidence 47888887776666554422 566778888777776543 3567888999988887654 5678888899999999998
Q ss_pred cchHHH
Q 039837 280 IVPPII 285 (544)
Q Consensus 280 ~~P~~~ 285 (544)
..+...
T Consensus 127 ~~~~~~ 132 (563)
T PRK06710 127 CLDLVF 132 (563)
T ss_pred Eeccch
Confidence 876543
No 313
>PRK09192 acyl-CoA synthetase; Validated
Probab=21.31 E-value=3.8e+02 Score=28.18 Aligned_cols=86 Identities=7% Similarity=-0.147 Sum_probs=61.5
Q ss_pred eeeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-c-------CHHHHHHHH
Q 039837 200 GVMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-F-------ELRAFLDAL 270 (544)
Q Consensus 200 gV~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~-------~~~~~~~~i 270 (544)
.-.+|...+...+..+...+.. ++.+++++...++-... +...+++++..|+..+..+. . ..+++...+
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i 124 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGD--FVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGML 124 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchh--HHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHH
Confidence 3567888887666555544422 67788988888887653 34567889999999988742 1 157788899
Q ss_pred HHcCceeeecchHHHHH
Q 039837 271 ITHEVTFAPIVPPIILS 287 (544)
Q Consensus 271 ~~~~~t~~~~~P~~~~~ 287 (544)
+..++..++........
T Consensus 125 ~~~~~~~il~~~~~~~~ 141 (579)
T PRK09192 125 ASAQPAAIITPDELLPW 141 (579)
T ss_pred HhcCCCEEEeChHHHHH
Confidence 99999998887665433
No 314
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=21.25 E-value=2.6e+02 Score=29.11 Aligned_cols=83 Identities=5% Similarity=-0.208 Sum_probs=59.8
Q ss_pred eeccHHHHHHHHHhhccccCC-cccCccEEEEecchhHHHHHHHHHHhhHhccceEEEcCc-cCHHHHHHHHHHcCceee
Q 039837 201 VMLTHRNLVANLCSTLFSVVP-EMIGQVTTLGLIPFFHIYGITGICCATLRNKGKVVMMNR-FELRAFLDALITHEVTFA 278 (544)
Q Consensus 201 V~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 278 (544)
..+|+..+...+..+...+.. +...++++...++-...+ ...++.++..|+..+..++ .....+...++..++..+
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRH--LEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVV 115 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH--HHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEE
Confidence 457888887777666654432 667788888777665543 3467788889999887764 567888889999999888
Q ss_pred ecchHHH
Q 039837 279 PIVPPII 285 (544)
Q Consensus 279 ~~~P~~~ 285 (544)
+......
T Consensus 116 ~~~~~~~ 122 (542)
T PRK06018 116 ITDLTFV 122 (542)
T ss_pred EEccccH
Confidence 8765443
No 315
>PRK11267 biopolymer transport protein ExbD; Provisional
Probab=21.16 E-value=4.1e+02 Score=21.76 Aligned_cols=28 Identities=14% Similarity=0.056 Sum_probs=12.4
Q ss_pred CCCEEEEEcCCCc---cHHHHHHHHHHhcCe
Q 039837 87 KGQVVIVVLPNVA---EYGIVALGIMAAGGV 114 (544)
Q Consensus 87 ~gd~V~i~~~n~~---~~~~~~lA~~~~G~~ 114 (544)
+...|.+..+... ..+-++=+|-.+|..
T Consensus 98 ~~~~V~I~aD~~~~~~~vv~vmd~l~~aG~~ 128 (141)
T PRK11267 98 KDTTIFFRADKTVDYETLMKVMDTLHQAGYL 128 (141)
T ss_pred CCceEEEEcCCCCCHHHHHHHHHHHHHcCCC
Confidence 3444555555443 223334444444543
No 316
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=20.85 E-value=1.6e+02 Score=25.69 Aligned_cols=54 Identities=22% Similarity=0.258 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHH-HcCCCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCCCCCHHHHHHHHHhcCceEEEecc
Q 039837 69 VARDTRGFAKALR-SLGLRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANPTAHASELKKQVDAADAKLIVSYA 143 (544)
Q Consensus 69 l~~~~~~la~~L~-~~Gi~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 143 (544)
..+|.+.+++++. +.++++||...+++..+.+ ++|+ +++...+.-++++|....
T Consensus 85 ~lErieg~~~~~l~~~~i~~~DVliviSnSGrN--------------pvpi-------e~A~~~rekGa~vI~vTS 139 (243)
T COG4821 85 YLERIEGYAKLFLHRLQIRPNDVLIVISNSGRN--------------PVPI-------EVAEYAREKGAKVIAVTS 139 (243)
T ss_pred hhHhhhhHHHHHHHHhcCCCCCEEEEEeCCCCC--------------Ccch-------HHHHHHHhcCCeEEEEeh
Confidence 4567788888765 5699999999888765443 4544 566677777777776543
No 317
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=20.75 E-value=4.3e+02 Score=24.57 Aligned_cols=61 Identities=13% Similarity=0.026 Sum_probs=35.5
Q ss_pred cCCceEEEEccCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCccHHHH-HHHHHHhcCeee
Q 039837 49 YADKVAFVEAVSGKAYTYAQVARDTRGFAKALRSLGLRKGQVVIVVLPNVAEYGIV-ALGIMAAGGVFS 116 (544)
Q Consensus 49 ~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~Gi~~gd~V~i~~~n~~~~~~~-~lA~~~~G~~~v 116 (544)
-++.+.+.|. .+..|=.++.+.+..+.+.+ .++-.+.+++-|+..+.++ .++.+.+|+..+
T Consensus 151 g~~~i~l~DT--~G~~~P~~v~~lv~~l~~~~-----~~~~~i~~H~Hn~~Gla~AN~laA~~aGa~~v 212 (266)
T cd07944 151 KPDVFYIVDS--FGSMYPEDIKRIISLLRSNL-----DKDIKLGFHAHNNLQLALANTLEAIELGVEII 212 (266)
T ss_pred CCCEEEEecC--CCCCCHHHHHHHHHHHHHhc-----CCCceEEEEeCCCccHHHHHHHHHHHcCCCEE
Confidence 4455555544 34555555555555444322 2345788888888765555 677778887554
No 318
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=20.72 E-value=2.3e+02 Score=27.26 Aligned_cols=41 Identities=22% Similarity=0.118 Sum_probs=31.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCccH-HHHHHHHHHhcCe
Q 039837 74 RGFAKALRSLGLRKGQVVIVVLPNVAEY-GIVALGIMAAGGV 114 (544)
Q Consensus 74 ~~la~~L~~~Gi~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~ 114 (544)
+.++..|.+.|+.+.+.|.+++.++..+ .-+++.+...|..
T Consensus 89 ~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~ 130 (320)
T PLN02723 89 EAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHE 130 (320)
T ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCC
Confidence 6678889999999999999998876544 3445666677764
No 319
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=20.51 E-value=3.9e+02 Score=25.09 Aligned_cols=55 Identities=22% Similarity=0.186 Sum_probs=35.8
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHHhcCeeecCCC----------CCCHHHHHHHHHh-cCceEEEec
Q 039837 85 LRKGQVVIVVLPNVAEYGIVALGIMAAGGVFSGANP----------TAHASELKKQVDA-ADAKLIVSY 142 (544)
Q Consensus 85 i~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~----------~~~~~~l~~~l~~-~~~~~ii~~ 142 (544)
+++||.|.+.-+.. .....++...|+.++.+++ ..+.+.++..++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~~h---~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCH---KSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCch---HHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 47899987765433 2334556678887776654 3467888888875 467766544
No 320
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=20.43 E-value=1.1e+02 Score=27.32 Aligned_cols=32 Identities=31% Similarity=0.273 Sum_probs=23.8
Q ss_pred HHHHHHhcCeeecCCCCCCHHHHHHHHHhcCc
Q 039837 105 ALGIMAAGGVFSGANPTAHASELKKQVDAADA 136 (544)
Q Consensus 105 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 136 (544)
.=++..+|+.+++|++..+.+.+..+++.++.
T Consensus 30 v~~i~~aG~~pv~ip~~~~~~~~~~~l~~idG 61 (217)
T PF07722_consen 30 VKAIEAAGGRPVPIPYDADDEELDELLDRIDG 61 (217)
T ss_dssp HHHHHHTT-EEEEE-SS--HHHHHHHHHCSSE
T ss_pred HHHHHHcCCEEEEEccCCCHHHHHHHHhhcCE
Confidence 34677889999999999999999999997764
No 321
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=20.42 E-value=41 Score=22.97 Aligned_cols=9 Identities=44% Similarity=0.988 Sum_probs=7.1
Q ss_pred CCCeeecCc
Q 039837 414 KNGWLHTGD 422 (544)
Q Consensus 414 ~~~~~~TGD 422 (544)
+.-||.|||
T Consensus 71 gkhwydtgd 79 (80)
T PF05452_consen 71 GKHWYDTGD 79 (80)
T ss_pred CcccccCCC
Confidence 445999998
No 322
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=20.42 E-value=4.9e+02 Score=21.89 Aligned_cols=88 Identities=14% Similarity=0.200 Sum_probs=57.6
Q ss_pred hhHhccceEEEcCccCHHHHHHHHHHc-CceeeecchHHHHHHhcCCCCCccCccccccccEEEecCC-------CCHhH
Q 039837 247 ATLRNKGKVVMMNRFELRAFLDALITH-EVTFAPIVPPIILSLVKDPIVDEFDLSKLQLRAVMTAAAP-------LAPDL 318 (544)
Q Consensus 247 ~~l~~G~~~~~~~~~~~~~~~~~i~~~-~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~v~~~G~~-------~~~~~ 318 (544)
.-+-.|.++++-...+...+.+.+.+. ++|++.-....+..|.+.. ..++ ++.||+. ..+..
T Consensus 15 ~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~~--------~~~v--i~~GG~~~~~~~~~~G~~a 84 (161)
T PF00455_consen 15 SLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSENP--------NIEV--ILLGGEVNPKSLSFVGPIA 84 (161)
T ss_pred HhCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhcC--------ceEE--EEeCCEEEcCCCcEECchH
Confidence 344556666666666777888888877 7888887777888886643 2345 8888853 23455
Q ss_pred HHHHHhhcCCCeEEecccCccccccc
Q 039837 319 LSSFEKKFPGVQVQEAYGLTEHSCIT 344 (544)
Q Consensus 319 ~~~~~~~~~~~~i~~~yG~tE~~~~~ 344 (544)
.+.+.+...+.-++..-|-++-.++.
T Consensus 85 ~~~l~~~~~d~afi~~~gi~~~~G~~ 110 (161)
T PF00455_consen 85 LEALRQFRFDKAFIGADGISEEGGLT 110 (161)
T ss_pred HHHHHhhccceEEecccEecCCCccc
Confidence 55566554566777777777644333
No 323
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=20.38 E-value=3.3e+02 Score=19.64 Aligned_cols=16 Identities=25% Similarity=0.200 Sum_probs=12.7
Q ss_pred cccccCCCceEEEEeC
Q 039837 361 SVGFILPNLEVKFINP 376 (544)
Q Consensus 361 ~~G~~~~~~~~~i~d~ 376 (544)
+-|.|..++.+++.+.
T Consensus 6 C~~~P~~~~~V~L~e~ 21 (80)
T PF01060_consen 6 CGGKPAKNVKVKLWED 21 (80)
T ss_pred eCCccCCCCEEEEEEC
Confidence 3467899999999884
Done!