Query 039838
Match_columns 466
No_of_seqs 308 out of 2146
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 02:29:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039838.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039838hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 2E-105 4E-110 837.8 40.1 462 3-465 35-505 (511)
2 PLN02854 3-ketoacyl-CoA syntha 100.0 1E-104 3E-109 833.1 46.1 462 3-465 42-518 (521)
3 PLN02932 3-ketoacyl-CoA syntha 100.0 2E-104 3E-109 828.1 42.1 461 3-465 1-476 (478)
4 PLN02377 3-ketoacyl-CoA syntha 100.0 7E-103 2E-107 819.8 45.6 462 2-465 30-500 (502)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 6.5E-97 1E-101 762.3 44.7 424 43-466 40-466 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 9.3E-74 2E-78 555.7 27.2 289 55-343 2-290 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 5.4E-57 1.2E-61 449.3 27.0 318 60-442 2-323 (323)
8 PLN03172 chalcone synthase fam 100.0 4.8E-52 1.1E-56 429.0 33.7 349 60-442 15-387 (393)
9 cd00831 CHS_like Chalcone and 100.0 3.5E-52 7.5E-57 427.5 32.4 345 61-439 1-361 (361)
10 PLN03169 chalcone synthase fam 100.0 4.4E-51 9.5E-56 422.6 33.2 352 57-442 17-389 (391)
11 PLN03173 chalcone synthase; Pr 100.0 5.6E-51 1.2E-55 420.8 31.9 351 60-444 15-389 (391)
12 PLN03168 chalcone synthase; Pr 100.0 9.9E-51 2.1E-55 419.3 33.3 350 60-444 14-388 (389)
13 PLN03170 chalcone synthase; Pr 100.0 1.1E-49 2.3E-54 412.8 31.2 350 60-443 19-392 (401)
14 PLN03171 chalcone synthase-lik 100.0 4.8E-49 1E-53 408.2 34.2 352 60-444 21-397 (399)
15 PRK12880 3-oxoacyl-(acyl carri 100.0 5.9E-49 1.3E-53 401.9 29.1 332 58-442 4-339 (353)
16 PRK05963 3-oxoacyl-(acyl carri 100.0 2E-48 4.4E-53 394.1 31.2 321 60-441 2-326 (326)
17 COG3424 BcsA Predicted naringe 100.0 4.1E-48 9E-53 371.2 29.3 345 62-443 2-354 (356)
18 PLN02326 3-oxoacyl-[acyl-carri 100.0 1.4E-47 2.9E-52 395.8 28.9 328 60-441 46-379 (379)
19 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 6.6E-47 1.4E-51 383.2 28.8 321 61-442 2-326 (326)
20 PRK12879 3-oxoacyl-(acyl carri 100.0 2.2E-46 4.8E-51 378.6 30.7 318 60-441 3-324 (325)
21 PRK07204 3-oxoacyl-(acyl carri 100.0 4.4E-46 9.4E-51 377.5 31.9 322 60-441 3-329 (329)
22 PRK09258 3-oxoacyl-(acyl carri 100.0 5.9E-46 1.3E-50 377.7 29.7 321 58-441 2-338 (338)
23 PRK06840 hypothetical protein; 100.0 2E-45 4.3E-50 374.2 31.4 330 59-442 2-336 (339)
24 cd00830 KAS_III Ketoacyl-acyl 100.0 9.9E-45 2.1E-49 365.3 26.9 316 61-439 1-320 (320)
25 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 3.8E-44 8.3E-49 361.3 29.1 313 61-441 2-318 (318)
26 PRK06816 3-oxoacyl-(acyl carri 100.0 2.5E-43 5.5E-48 363.9 30.6 346 60-442 1-378 (378)
27 PRK04262 hypothetical protein; 100.0 2.4E-43 5.2E-48 360.2 26.1 311 60-446 1-313 (347)
28 PRK09352 3-oxoacyl-(acyl carri 100.0 1.8E-42 3.8E-47 349.3 31.0 314 60-442 2-319 (319)
29 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 9.4E-43 2E-47 355.4 23.9 316 61-456 1-319 (345)
30 PRK07515 3-oxoacyl-(acyl carri 100.0 1.3E-41 2.9E-46 350.5 28.6 345 61-441 2-371 (372)
31 cd00827 init_cond_enzymes "ini 100.0 8.1E-40 1.7E-44 330.1 25.1 321 61-439 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 3.4E-37 7.5E-42 318.1 29.1 307 62-443 1-319 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 7.8E-35 1.7E-39 303.9 27.3 313 58-444 1-373 (459)
34 COG3425 PksG 3-hydroxy-3-methy 100.0 1E-33 2.2E-38 283.5 23.8 314 60-446 1-315 (377)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 4.5E-32 9.7E-37 282.8 25.0 316 61-444 1-376 (454)
36 PF00195 Chal_sti_synt_N: Chal 100.0 1.2E-31 2.6E-36 254.7 15.1 203 56-260 9-226 (226)
37 cd00327 cond_enzymes Condensin 100.0 4.3E-29 9.3E-34 242.9 16.1 235 136-439 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 1.7E-26 3.8E-31 233.4 13.9 252 136-439 11-332 (332)
39 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 9.1E-21 2E-25 156.2 7.4 88 347-441 3-90 (90)
40 PF02797 Chal_sti_synt_C: Chal 99.8 1.5E-19 3.3E-24 162.7 14.0 118 298-442 26-150 (151)
41 PF01154 HMG_CoA_synt_N: Hydro 99.8 1.4E-19 3E-24 164.5 10.4 167 58-259 1-172 (174)
42 KOG1393 Hydroxymethylglutaryl- 99.8 3.5E-18 7.7E-23 168.7 21.0 323 58-446 8-381 (462)
43 PRK06147 3-oxoacyl-(acyl carri 99.8 4.8E-17 1E-21 166.5 20.1 311 60-443 3-344 (348)
44 TIGR02845 spore_V_AD stage V s 99.7 8E-16 1.7E-20 152.5 22.1 116 137-262 51-174 (327)
45 cd00834 KAS_I_II Beta-ketoacyl 99.6 2.6E-14 5.6E-19 148.8 21.7 285 60-411 1-351 (406)
46 PRK08304 stage V sporulation p 99.6 5.4E-14 1.2E-18 139.9 20.7 116 138-262 58-180 (337)
47 cd00751 thiolase Thiolase are 99.6 6.8E-14 1.5E-18 145.2 19.9 93 137-230 23-116 (386)
48 PRK05656 acetyl-CoA acetyltran 99.5 7.2E-13 1.6E-17 137.8 20.5 93 137-230 27-120 (393)
49 PRK09051 beta-ketothiolase; Pr 99.5 8.5E-13 1.8E-17 137.2 20.9 93 137-230 28-122 (394)
50 TIGR01930 AcCoA-C-Actrans acet 99.5 4.9E-13 1.1E-17 138.8 18.5 93 137-230 22-115 (386)
51 PRK09052 acetyl-CoA acetyltran 99.5 1.2E-12 2.7E-17 136.2 19.4 93 137-230 32-127 (399)
52 PRK06064 acetyl-CoA acetyltran 99.5 4.3E-12 9.2E-17 132.0 20.8 91 137-229 23-116 (389)
53 smart00825 PKS_KS Beta-ketoacy 99.5 2.6E-12 5.7E-17 134.7 19.2 223 136-411 87-358 (424)
54 PRK06501 3-oxoacyl-(acyl carri 99.5 4.6E-12 1E-16 133.2 20.2 312 61-440 12-421 (425)
55 PRK07108 acetyl-CoA acetyltran 99.5 3E-12 6.5E-17 133.1 18.5 93 137-230 28-122 (392)
56 cd00829 SCP-x_thiolase Thiolas 99.4 8.7E-12 1.9E-16 128.8 20.6 93 136-230 16-109 (375)
57 PRK08313 acetyl-CoA acetyltran 99.4 9.3E-12 2E-16 129.2 20.3 91 137-229 25-117 (386)
58 TIGR03150 fabF beta-ketoacyl-a 99.4 1.2E-11 2.7E-16 128.9 21.0 316 60-439 1-406 (407)
59 PRK08242 acetyl-CoA acetyltran 99.4 1.3E-11 2.7E-16 128.6 20.5 94 136-230 28-123 (402)
60 cd00828 elong_cond_enzymes "el 99.4 8.3E-12 1.8E-16 130.3 19.3 222 136-411 72-350 (407)
61 PRK08235 acetyl-CoA acetyltran 99.4 9.4E-12 2E-16 129.4 19.2 93 137-230 27-120 (393)
62 cd00833 PKS polyketide synthas 99.4 5.2E-11 1.1E-15 124.5 24.8 120 136-261 87-247 (421)
63 PF08545 ACP_syn_III: 3-Oxoacy 99.4 3.8E-13 8.1E-18 108.5 6.6 66 191-261 1-66 (80)
64 PRK06205 acetyl-CoA acetyltran 99.4 9.5E-12 2.1E-16 129.9 18.9 93 137-230 27-120 (404)
65 PRK05790 putative acyltransfer 99.4 2.7E-11 5.7E-16 126.2 20.9 92 137-229 27-119 (393)
66 PRK06954 acetyl-CoA acetyltran 99.4 2.1E-11 4.5E-16 127.0 18.9 93 137-230 32-125 (397)
67 PRK12578 acetyl-CoA acetyltran 99.4 5.7E-11 1.2E-15 123.4 21.1 91 138-230 23-114 (385)
68 PRK07314 3-oxoacyl-(acyl carri 99.4 7.8E-11 1.7E-15 123.2 22.0 316 60-441 2-409 (411)
69 PRK12404 stage V sporulation p 99.3 2.2E-10 4.9E-15 113.6 23.1 116 137-261 55-177 (334)
70 PRK06445 acetyl-CoA acetyltran 99.3 4.3E-11 9.4E-16 124.6 18.8 90 137-229 33-126 (394)
71 PRK07661 acetyl-CoA acetyltran 99.3 8E-11 1.7E-15 122.4 19.8 93 137-230 28-122 (391)
72 PRK06025 acetyl-CoA acetyltran 99.3 1.7E-10 3.6E-15 120.1 19.8 94 136-230 29-124 (417)
73 PRK07103 polyketide beta-ketoa 99.3 1.4E-10 3E-15 121.5 18.8 249 136-440 80-409 (410)
74 PRK06065 acetyl-CoA acetyltran 99.3 6.4E-10 1.4E-14 115.6 22.8 90 137-228 30-121 (392)
75 PLN02287 3-ketoacyl-CoA thiola 99.3 3.2E-10 6.9E-15 119.7 20.4 93 137-230 72-166 (452)
76 PRK06690 acetyl-CoA acetyltran 99.3 4E-10 8.7E-15 115.8 19.5 243 136-442 25-360 (361)
77 PRK06158 thiolase; Provisional 99.2 6.4E-10 1.4E-14 115.5 20.3 85 138-227 30-115 (384)
78 PRK06333 3-oxoacyl-(acyl carri 99.2 3.7E-10 8E-15 118.7 18.6 318 60-442 4-422 (424)
79 PRK08722 3-oxoacyl-(acyl carri 99.2 9E-10 2E-14 115.5 21.1 317 60-440 4-412 (414)
80 PRK07851 acetyl-CoA acetyltran 99.2 5.7E-10 1.2E-14 116.6 19.3 92 137-230 28-122 (406)
81 PLN02644 acetyl-CoA C-acetyltr 99.2 8.2E-10 1.8E-14 115.0 20.3 92 137-229 26-118 (394)
82 PRK06633 acetyl-CoA acetyltran 99.2 5.4E-10 1.2E-14 116.1 17.8 94 136-230 27-121 (392)
83 PRK07850 acetyl-CoA acetyltran 99.2 1.6E-09 3.5E-14 112.5 20.5 93 137-230 27-121 (387)
84 PRK08256 lipid-transfer protei 99.2 9.4E-10 2E-14 114.5 18.7 88 137-229 23-111 (391)
85 PRK08963 fadI 3-ketoacyl-CoA t 99.2 2.4E-09 5.2E-14 112.7 20.7 93 137-230 30-123 (428)
86 PRK09116 3-oxoacyl-(acyl carri 99.2 3.7E-09 8.1E-14 110.5 21.9 311 60-440 2-405 (405)
87 PRK08439 3-oxoacyl-(acyl carri 99.2 5.4E-09 1.2E-13 109.4 22.7 309 60-440 2-404 (406)
88 PRK06504 acetyl-CoA acetyltran 99.2 4.6E-09 9.9E-14 109.2 21.9 94 136-230 26-121 (390)
89 PRK05952 3-oxoacyl-(acyl carri 99.2 5.2E-09 1.1E-13 108.5 22.1 295 60-440 2-380 (381)
90 PRK09185 3-oxoacyl-(acyl carri 99.1 2E-08 4.4E-13 104.6 24.1 206 172-441 137-390 (392)
91 PLN02787 3-oxoacyl-[acyl-carri 99.1 2.9E-08 6.3E-13 107.0 24.9 313 60-441 129-538 (540)
92 PLN02836 3-oxoacyl-[acyl-carri 99.1 2.3E-08 4.9E-13 105.7 23.3 119 136-261 93-267 (437)
93 cd00832 CLF Chain-length facto 99.1 1.7E-08 3.6E-13 105.5 21.8 279 60-410 1-343 (399)
94 PRK07910 3-oxoacyl-(acyl carri 99.1 3.9E-08 8.4E-13 103.3 24.2 316 60-440 12-416 (418)
95 PTZ00050 3-oxoacyl-acyl carrie 99.1 1E-08 2.2E-13 107.9 19.3 250 136-440 77-419 (421)
96 PRK07801 acetyl-CoA acetyltran 99.0 1E-08 2.2E-13 106.5 18.9 92 137-229 27-120 (382)
97 PRK08947 fadA 3-ketoacyl-CoA t 99.0 1.1E-08 2.3E-13 106.4 18.9 94 136-230 27-123 (387)
98 PRK06059 lipid-transfer protei 99.0 9.2E-10 2E-14 114.9 10.4 92 137-230 24-117 (399)
99 PRK08170 acetyl-CoA acetyltran 99.0 1.9E-09 4.1E-14 113.4 11.1 93 137-230 28-121 (426)
100 TIGR02445 fadA fatty oxidation 99.0 2.3E-08 5E-13 103.9 18.9 94 136-230 25-121 (385)
101 cd00826 nondecarbox_cond_enzym 99.0 2.4E-09 5.3E-14 111.5 10.9 93 136-230 23-117 (393)
102 PRK07967 3-oxoacyl-(acyl carri 98.9 1.3E-07 2.9E-12 98.9 22.4 308 60-441 2-403 (406)
103 PRK08257 acetyl-CoA acetyltran 98.9 1.1E-07 2.4E-12 101.8 21.8 91 137-229 28-120 (498)
104 PRK14691 3-oxoacyl-(acyl carri 98.9 6.5E-08 1.4E-12 98.9 18.3 247 137-441 5-339 (342)
105 PF00108 Thiolase_N: Thiolase, 98.9 7.9E-09 1.7E-13 102.0 10.5 95 136-231 26-121 (264)
106 PRK06519 3-oxoacyl-(acyl carri 98.9 7.2E-07 1.6E-11 93.1 24.7 303 58-440 4-395 (398)
107 PRK13359 beta-ketoadipyl CoA t 98.7 5.1E-08 1.1E-12 101.7 11.2 94 136-230 26-122 (400)
108 PRK07516 acetyl-CoA acetyltran 98.7 3.9E-08 8.4E-13 102.4 10.0 92 137-230 23-117 (389)
109 PRK06289 acetyl-CoA acetyltran 98.7 4.3E-08 9.4E-13 102.5 10.1 90 137-230 27-122 (403)
110 PRK09050 beta-ketoadipyl CoA t 98.7 8.8E-08 1.9E-12 100.0 10.6 95 136-231 26-123 (401)
111 PRK08131 acetyl-CoA acetyltran 98.7 1.1E-07 2.3E-12 99.4 11.2 95 136-231 26-122 (401)
112 PRK06066 acetyl-CoA acetyltran 98.7 4.3E-06 9.3E-11 86.9 22.4 87 138-229 27-116 (385)
113 PRK06366 acetyl-CoA acetyltran 98.7 1.2E-07 2.7E-12 98.6 10.8 93 137-230 27-120 (388)
114 TIGR02430 pcaF beta-ketoadipyl 98.7 1.2E-07 2.7E-12 98.8 10.7 94 136-230 25-121 (400)
115 TIGR02813 omega_3_PfaA polyket 98.6 1.5E-06 3.3E-11 107.6 21.5 216 174-443 185-463 (2582)
116 PF00109 ketoacyl-synt: Beta-k 98.6 1.4E-07 3.1E-12 91.8 10.2 119 136-259 87-251 (254)
117 TIGR02446 FadI fatty oxidation 98.6 1.4E-07 3.1E-12 99.3 9.8 93 137-230 32-125 (430)
118 PRK06157 acetyl-CoA acetyltran 98.6 2.8E-07 6E-12 96.3 11.0 92 137-230 28-120 (398)
119 PTZ00455 3-ketoacyl-CoA thiola 98.6 3.9E-07 8.4E-12 96.2 11.4 93 137-230 49-152 (438)
120 PRK06365 acetyl-CoA acetyltran 98.5 4.3E-07 9.2E-12 95.8 10.6 92 137-230 38-131 (430)
121 KOG1390 Acetyl-CoA acetyltrans 98.5 8.7E-07 1.9E-11 87.1 11.7 95 136-231 30-125 (396)
122 PRK09268 acetyl-CoA acetyltran 98.4 1.2E-06 2.6E-11 92.2 11.0 93 137-230 32-125 (427)
123 PRK07937 lipid-transfer protei 98.3 5.1E-05 1.1E-09 78.0 19.2 87 138-229 26-114 (352)
124 PF07451 SpoVAD: Stage V sporu 98.3 3.8E-05 8.2E-10 75.7 16.3 117 137-262 52-175 (329)
125 COG0304 FabB 3-oxoacyl-(acyl-c 98.2 8.9E-05 1.9E-09 77.5 19.1 120 136-262 71-245 (412)
126 PRK08142 acetyl-CoA acetyltran 98.2 7.3E-06 1.6E-10 85.3 9.8 86 138-228 27-112 (388)
127 PRK07855 lipid-transfer protei 98.0 2.4E-05 5.3E-10 81.4 10.2 83 138-225 26-108 (386)
128 KOG1389 3-oxoacyl CoA thiolase 98.0 7.5E-05 1.6E-09 73.4 11.8 92 138-231 63-156 (435)
129 COG3321 Polyketide synthase mo 97.9 0.00066 1.4E-08 79.1 20.5 293 60-410 4-360 (1061)
130 PF08540 HMG_CoA_synt_C: Hydro 97.8 7.4E-05 1.6E-09 74.1 9.0 62 385-446 143-206 (282)
131 COG0183 PaaJ Acetyl-CoA acetyl 97.6 0.00022 4.7E-09 74.5 9.4 95 137-232 28-126 (392)
132 KOG1394 3-oxoacyl-(acyl-carrie 97.1 0.0054 1.2E-07 61.8 11.5 119 136-261 94-269 (440)
133 KOG1406 Peroxisomal 3-ketoacyl 97.0 0.00082 1.8E-08 64.9 5.0 89 138-231 31-120 (408)
134 KOG1391 Acetyl-CoA acetyltrans 95.9 0.017 3.6E-07 55.9 6.0 93 136-231 28-124 (396)
135 PF08541 ACP_syn_III_C: 3-Oxoa 95.3 0.018 3.9E-07 46.9 3.4 75 148-226 1-78 (90)
136 TIGR00748 HMG_CoA_syn_Arc hydr 94.9 0.1 2.3E-06 53.5 8.5 82 137-224 207-293 (345)
137 PRK06816 3-oxoacyl-(acyl carri 94.6 0.15 3.3E-06 52.9 8.9 91 134-228 268-366 (378)
138 PRK09258 3-oxoacyl-(acyl carri 93.9 0.21 4.7E-06 50.7 8.2 91 132-226 233-326 (338)
139 PRK05963 3-oxoacyl-(acyl carri 93.7 0.15 3.1E-06 51.7 6.5 88 134-225 223-313 (326)
140 PRK06025 acetyl-CoA acetyltran 93.6 0.23 5E-06 52.3 7.9 91 141-258 318-416 (417)
141 TIGR02430 pcaF beta-ketoadipyl 93.5 0.2 4.3E-06 52.6 7.3 94 340-440 302-398 (400)
142 PRK09050 beta-ketoadipyl CoA t 93.4 0.18 3.9E-06 52.9 6.7 91 340-440 303-399 (401)
143 KOG1392 Acetyl-CoA acetyltrans 93.2 0.084 1.8E-06 51.9 3.5 94 136-230 66-160 (465)
144 PRK13359 beta-ketoadipyl CoA t 93.0 0.3 6.6E-06 51.2 7.7 96 340-441 302-399 (400)
145 PRK07204 3-oxoacyl-(acyl carri 93.0 0.33 7.1E-06 49.2 7.8 85 134-225 226-316 (329)
146 TIGR00747 fabH 3-oxoacyl-(acyl 93.0 0.27 5.9E-06 49.4 7.1 84 135-225 216-305 (318)
147 PF13723 Ketoacyl-synt_2: Beta 92.9 2 4.3E-05 41.2 12.6 114 136-261 34-172 (218)
148 PRK06840 hypothetical protein; 92.5 0.39 8.4E-06 48.9 7.6 82 137-225 236-322 (339)
149 PRK12879 3-oxoacyl-(acyl carri 92.5 0.4 8.6E-06 48.3 7.6 85 134-225 221-311 (325)
150 PRK06366 acetyl-CoA acetyltran 92.5 0.43 9.3E-06 49.8 8.0 93 340-442 291-387 (388)
151 cd00825 decarbox_cond_enzymes 92.4 0.52 1.1E-05 47.3 8.4 77 139-215 206-286 (332)
152 PRK04262 hypothetical protein; 92.3 0.28 6.1E-06 50.3 6.2 67 139-209 210-281 (347)
153 PLN02326 3-oxoacyl-[acyl-carri 92.3 0.34 7.3E-06 50.3 6.9 88 134-225 276-366 (379)
154 cd00830 KAS_III Ketoacyl-acyl 91.6 0.51 1.1E-05 47.2 7.2 85 134-225 219-309 (320)
155 PF02803 Thiolase_C: Thiolase, 91.5 0.36 7.9E-06 42.1 5.1 95 340-440 28-122 (123)
156 CHL00203 fabH 3-oxoacyl-acyl-c 91.4 0.61 1.3E-05 47.2 7.5 81 138-225 226-312 (326)
157 PRK09352 3-oxoacyl-(acyl carri 90.8 0.76 1.6E-05 46.1 7.5 85 134-225 215-305 (319)
158 PRK07515 3-oxoacyl-(acyl carri 90.5 0.85 1.8E-05 47.1 7.8 86 134-225 267-358 (372)
159 PRK08131 acetyl-CoA acetyltran 90.0 1 2.2E-05 47.3 7.8 95 340-441 302-399 (401)
160 cd00327 cond_enzymes Condensin 90.0 1.4 3E-05 42.4 8.3 77 139-215 146-226 (254)
161 PRK08242 acetyl-CoA acetyltran 89.3 0.85 1.8E-05 47.9 6.6 91 141-258 303-401 (402)
162 PF02803 Thiolase_C: Thiolase, 88.7 1.1 2.3E-05 39.1 5.7 70 140-215 24-101 (123)
163 COG0332 FabH 3-oxoacyl-[acyl-c 88.0 0.75 1.6E-05 46.7 5.0 56 132-191 217-272 (323)
164 PRK07516 acetyl-CoA acetyltran 87.9 2.6 5.7E-05 43.9 9.1 68 340-413 266-351 (389)
165 PRK07850 acetyl-CoA acetyltran 87.3 3 6.4E-05 43.6 9.1 93 139-258 286-386 (387)
166 PRK06147 3-oxoacyl-(acyl carri 87.2 1.3 2.8E-05 45.5 6.3 88 139-226 235-330 (348)
167 TIGR02446 FadI fatty oxidation 86.9 2.6 5.7E-05 44.6 8.5 35 341-380 318-352 (430)
168 PRK08170 acetyl-CoA acetyltran 86.8 2.3 4.9E-05 45.0 8.0 25 340-369 313-337 (426)
169 COG3425 PksG 3-hydroxy-3-methy 86.6 2.3 5E-05 43.9 7.5 83 136-224 207-296 (377)
170 PRK05656 acetyl-CoA acetyltran 86.3 1.4 3.1E-05 46.0 6.1 50 140-195 293-342 (393)
171 cd00831 CHS_like Chalcone and 85.8 1.8 3.8E-05 44.6 6.4 88 134-225 255-350 (361)
172 PRK06205 acetyl-CoA acetyltran 85.6 1.5 3.2E-05 46.1 5.8 93 140-258 300-402 (404)
173 PRK06690 acetyl-CoA acetyltran 85.2 2.6 5.7E-05 43.6 7.3 70 139-214 259-336 (361)
174 PRK06445 acetyl-CoA acetyltran 85.1 3 6.6E-05 43.5 7.9 67 140-212 294-368 (394)
175 PRK06289 acetyl-CoA acetyltran 84.7 3.8 8.3E-05 42.9 8.4 87 340-432 282-393 (403)
176 PRK09052 acetyl-CoA acetyltran 83.7 2.5 5.4E-05 44.3 6.5 93 139-258 298-398 (399)
177 PLN03169 chalcone synthase fam 83.2 3.7 7.9E-05 43.0 7.5 89 135-225 278-375 (391)
178 PRK06954 acetyl-CoA acetyltran 83.1 1.9 4.2E-05 45.1 5.4 92 140-258 297-396 (397)
179 PRK08257 acetyl-CoA acetyltran 82.9 3.4 7.4E-05 44.7 7.3 79 140-224 294-382 (498)
180 PRK09051 beta-ketothiolase; Pr 82.7 2.8 6.1E-05 43.9 6.4 68 140-213 294-369 (394)
181 cd00827 init_cond_enzymes "ini 81.6 4.6 0.0001 40.4 7.3 91 132-226 217-314 (324)
182 PRK07851 acetyl-CoA acetyltran 81.1 3.5 7.5E-05 43.4 6.4 92 140-258 305-404 (406)
183 PLN02287 3-ketoacyl-CoA thiola 79.9 4.1 8.9E-05 43.5 6.5 96 140-261 333-437 (452)
184 TIGR01835 HMG-CoA-S_prok 3-hyd 79.7 4.5 9.9E-05 42.0 6.7 73 134-208 201-286 (379)
185 PRK12880 3-oxoacyl-(acyl carri 79.6 5.2 0.00011 41.2 7.0 71 134-208 238-312 (353)
186 cd00826 nondecarbox_cond_enzym 79.3 5.6 0.00012 41.6 7.2 39 340-383 275-313 (393)
187 PRK07661 acetyl-CoA acetyltran 79.0 3.3 7.1E-05 43.3 5.3 93 139-258 290-390 (391)
188 cd00829 SCP-x_thiolase Thiolas 78.3 7.9 0.00017 39.8 7.9 44 139-186 252-295 (375)
189 PRK08235 acetyl-CoA acetyltran 78.0 4.1 8.9E-05 42.6 5.7 68 140-213 293-368 (393)
190 TIGR02445 fadA fatty oxidation 77.7 4.7 0.0001 42.1 6.0 41 140-184 282-322 (385)
191 PRK06504 acetyl-CoA acetyltran 77.6 5.8 0.00013 41.5 6.7 54 139-199 289-342 (390)
192 KOG2708 Predicted metalloprote 77.3 9 0.00019 37.0 7.1 86 138-229 51-137 (336)
193 PRK08947 fadA 3-ketoacyl-CoA t 77.2 5 0.00011 41.9 6.1 70 140-213 284-362 (387)
194 KOG1202 Animal-type fatty acid 76.8 3 6.4E-05 48.7 4.4 124 138-262 89-248 (2376)
195 PRK09268 acetyl-CoA acetyltran 76.3 14 0.0003 39.1 9.2 96 340-440 315-426 (427)
196 cd00751 thiolase Thiolase are 76.3 8.8 0.00019 39.9 7.6 42 140-185 287-328 (386)
197 TIGR01930 AcCoA-C-Actrans acet 75.6 6.7 0.00015 40.8 6.6 49 141-195 289-337 (386)
198 COG1214 Inactive homolog of me 75.2 8.9 0.00019 36.8 6.8 57 139-195 40-97 (220)
199 PF01135 PCMT: Protein-L-isoas 74.5 5.3 0.00012 38.0 5.0 41 396-436 49-89 (209)
200 PTZ00455 3-ketoacyl-CoA thiola 73.8 17 0.00036 38.7 9.0 39 340-383 315-353 (438)
201 PRK06064 acetyl-CoA acetyltran 72.7 12 0.00025 39.0 7.5 41 140-184 260-300 (389)
202 PRK05790 putative acyltransfer 72.1 11 0.00023 39.4 7.0 68 140-213 293-368 (393)
203 PRK06633 acetyl-CoA acetyltran 71.9 7.5 0.00016 40.7 5.8 67 140-214 292-368 (392)
204 PRK07108 acetyl-CoA acetyltran 71.9 3.8 8.2E-05 42.9 3.6 68 140-213 292-367 (392)
205 PRK08142 acetyl-CoA acetyltran 70.7 28 0.00061 36.4 9.8 39 340-383 261-299 (388)
206 PF02801 Ketoacyl-synt_C: Beta 70.5 1 2.2E-05 38.6 -0.8 77 139-215 26-110 (119)
207 PRK09604 UGMP family protein; 69.6 14 0.00031 37.7 7.2 49 136-184 51-104 (332)
208 COG0533 QRI7 Metal-dependent p 69.6 15 0.00033 37.5 7.1 88 137-229 51-139 (342)
209 PRK08256 lipid-transfer protei 69.5 14 0.0003 38.5 7.2 43 140-186 266-308 (391)
210 PRK08963 fadI 3-ketoacyl-CoA t 68.9 23 0.0005 37.5 8.8 25 140-164 311-335 (428)
211 TIGR00329 gcp_kae1 metallohydr 68.6 14 0.00031 37.1 6.8 36 137-172 49-84 (305)
212 cd00834 KAS_I_II Beta-ketoacyl 67.1 9.6 0.00021 39.5 5.5 77 139-215 276-358 (406)
213 PRK14691 3-oxoacyl-(acyl carri 66.5 15 0.00032 37.8 6.5 46 139-184 207-253 (342)
214 PLN02644 acetyl-CoA C-acetyltr 66.3 11 0.00024 39.4 5.7 66 141-212 294-367 (394)
215 KOG2707 Predicted metalloprote 66.0 16 0.00036 37.3 6.5 52 134-185 80-136 (405)
216 PRK09185 3-oxoacyl-(acyl carri 65.7 24 0.00052 36.8 8.0 74 140-215 262-340 (392)
217 PRK06158 thiolase; Provisional 64.9 22 0.00048 37.0 7.6 41 140-185 256-297 (384)
218 PF00814 Peptidase_M22: Glycop 64.7 10 0.00022 37.5 4.8 55 137-195 30-89 (268)
219 PRK08304 stage V sporulation p 64.0 21 0.00045 36.5 6.9 87 140-228 210-312 (337)
220 PRK07801 acetyl-CoA acetyltran 62.7 14 0.00031 38.3 5.7 67 141-213 283-357 (382)
221 PRK07314 3-oxoacyl-(acyl carri 62.7 13 0.00028 38.8 5.4 45 140-184 278-323 (411)
222 PRK07855 lipid-transfer protei 62.2 28 0.00061 36.3 7.8 41 140-185 268-309 (386)
223 cd00828 elong_cond_enzymes "el 61.8 14 0.00031 38.4 5.5 45 139-183 275-320 (407)
224 smart00825 PKS_KS Beta-ketoacy 61.3 23 0.0005 37.0 7.0 46 139-184 280-326 (424)
225 TIGR03723 bact_gcp putative gl 61.0 24 0.00053 35.7 6.9 55 137-195 50-109 (314)
226 PRK06519 3-oxoacyl-(acyl carri 60.8 27 0.00058 36.7 7.3 71 139-213 281-353 (398)
227 TIGR03725 bact_YeaZ universal 60.5 11 0.00024 35.4 4.1 35 138-172 35-69 (202)
228 PRK07937 lipid-transfer protei 60.4 34 0.00074 35.2 7.9 77 142-224 250-334 (352)
229 PRK14878 UGMP family protein; 60.2 17 0.00038 36.9 5.7 51 133-184 42-97 (323)
230 PTZ00050 3-oxoacyl-acyl carrie 59.8 27 0.00058 36.8 7.2 46 139-184 284-331 (421)
231 TIGR03150 fabF beta-ketoacyl-a 59.4 19 0.00041 37.3 6.0 45 140-184 277-322 (407)
232 cd02185 AroH Chorismate mutase 58.7 30 0.00065 29.8 5.9 52 142-196 24-77 (117)
233 PRK12578 acetyl-CoA acetyltran 58.3 28 0.0006 36.2 6.9 42 140-185 259-300 (385)
234 PLN02787 3-oxoacyl-[acyl-carri 57.9 25 0.00053 38.5 6.6 45 140-184 407-452 (540)
235 PRK06365 acetyl-CoA acetyltran 57.4 50 0.0011 35.0 8.7 41 140-185 295-338 (430)
236 PLN03170 chalcone synthase; Pr 56.7 24 0.00052 37.0 6.2 71 135-209 278-354 (401)
237 PRK08313 acetyl-CoA acetyltran 56.6 54 0.0012 34.1 8.8 42 139-185 256-300 (386)
238 PLN03173 chalcone synthase; Pr 56.4 25 0.00054 36.8 6.2 71 135-209 274-350 (391)
239 TIGR01796 CM_mono_aroH monofun 56.2 33 0.00071 29.6 5.7 51 142-196 24-77 (117)
240 PRK06501 3-oxoacyl-(acyl carri 56.1 27 0.00058 36.9 6.5 44 140-183 291-335 (425)
241 PRK12404 stage V sporulation p 55.7 49 0.0011 33.8 7.8 87 140-228 208-310 (334)
242 COG0304 FabB 3-oxoacyl-(acyl-c 55.6 22 0.00048 37.5 5.6 75 139-214 277-356 (412)
243 PRK05952 3-oxoacyl-(acyl carri 54.5 21 0.00046 37.2 5.3 45 139-183 255-300 (381)
244 TIGR02845 spore_V_AD stage V s 54.3 37 0.00079 34.6 6.7 87 140-228 204-305 (327)
245 cd00832 CLF Chain-length facto 53.9 25 0.00054 36.8 5.7 76 139-215 271-351 (399)
246 PF00195 Chal_sti_synt_N: Chal 53.3 26 0.00056 33.9 5.2 78 341-429 109-190 (226)
247 PF07451 SpoVAD: Stage V sporu 52.8 16 0.00035 36.7 3.8 85 141-228 206-307 (329)
248 PF07736 CM_1: Chorismate muta 52.3 43 0.00093 29.0 5.8 52 141-196 23-77 (118)
249 PRK09605 bifunctional UGMP fam 52.3 42 0.00091 36.4 7.4 59 133-196 46-109 (535)
250 PRK09116 3-oxoacyl-(acyl carri 52.2 35 0.00075 35.8 6.5 46 139-184 276-322 (405)
251 PF02801 Ketoacyl-synt_C: Beta 51.9 16 0.00035 31.1 3.3 67 340-412 31-104 (119)
252 PLN03171 chalcone synthase-lik 51.7 44 0.00094 35.1 7.1 71 134-209 275-360 (399)
253 TIGR03722 arch_KAE1 universal 51.4 25 0.00054 35.6 5.1 36 133-169 43-78 (322)
254 PRK06333 3-oxoacyl-(acyl carri 50.8 37 0.00079 35.6 6.5 45 139-183 289-334 (424)
255 PLN02836 3-oxoacyl-[acyl-carri 50.4 75 0.0016 33.6 8.7 25 139-163 300-324 (437)
256 PLN00415 3-ketoacyl-CoA syntha 49.2 52 0.0011 35.3 7.2 77 340-427 142-222 (466)
257 PLN03172 chalcone synthase fam 48.5 59 0.0013 34.0 7.5 77 340-427 110-190 (393)
258 PRK08722 3-oxoacyl-(acyl carri 47.2 40 0.00086 35.5 6.0 45 139-183 279-324 (414)
259 cd00833 PKS polyketide synthas 46.1 48 0.001 34.4 6.4 26 139-164 280-305 (421)
260 PRK07910 3-oxoacyl-(acyl carri 45.9 43 0.00093 35.3 6.0 46 139-184 287-333 (418)
261 PTZ00340 O-sialoglycoprotein e 45.6 80 0.0017 32.5 7.7 58 138-195 51-109 (345)
262 KOG1406 Peroxisomal 3-ketoacyl 45.6 20 0.00044 35.3 3.1 28 136-163 270-297 (408)
263 PRK06157 acetyl-CoA acetyltran 44.2 93 0.002 32.5 8.2 43 140-186 268-312 (398)
264 PRK00768 nadE NAD synthetase; 42.4 3.5E+02 0.0077 26.8 13.5 110 80-205 3-120 (268)
265 PRK08329 threonine synthase; V 41.8 64 0.0014 33.1 6.4 64 370-433 275-345 (347)
266 PRK06066 acetyl-CoA acetyltran 41.2 1.1E+02 0.0024 32.0 8.1 41 141-185 259-301 (385)
267 PLN02932 3-ketoacyl-CoA syntha 41.2 79 0.0017 34.1 7.1 77 340-427 156-236 (478)
268 KOG1389 3-oxoacyl CoA thiolase 41.2 59 0.0013 32.9 5.7 70 142-216 324-400 (435)
269 PLN02192 3-ketoacyl-CoA syntha 39.9 1E+02 0.0022 33.6 7.7 77 340-427 184-264 (511)
270 PRK06059 lipid-transfer protei 39.8 72 0.0016 33.3 6.6 96 340-440 279-398 (399)
271 PLN03168 chalcone synthase; Pr 39.8 77 0.0017 33.1 6.7 77 340-427 109-189 (389)
272 COG4126 Hydantoin racemase [Am 38.9 1.9E+02 0.0042 27.8 8.5 101 94-215 118-218 (230)
273 PF08392 FAE1_CUT1_RppA: FAE1/ 38.8 1.2E+02 0.0025 30.5 7.4 81 337-428 88-172 (290)
274 PRK07103 polyketide beta-ketoa 36.9 75 0.0016 33.3 6.1 23 141-163 284-306 (410)
275 PRK09585 anmK anhydro-N-acetyl 36.1 1E+02 0.0022 32.0 6.8 76 129-204 62-147 (365)
276 COG2518 Pcm Protein-L-isoaspar 35.8 34 0.00074 32.6 3.0 34 402-435 55-88 (209)
277 COG1153 FwdD Formylmethanofura 35.5 37 0.00081 29.3 2.9 50 402-459 31-87 (128)
278 PLN02377 3-ketoacyl-CoA syntha 35.2 1.1E+02 0.0024 33.2 7.1 77 340-427 180-260 (502)
279 KOG1391 Acetyl-CoA acetyltrans 33.4 53 0.0012 32.4 3.9 49 141-195 296-344 (396)
280 PF11392 DUF2877: Protein of u 32.6 85 0.0018 26.6 4.7 45 368-412 65-109 (110)
281 PRK05183 hscA chaperone protei 31.8 2.5E+02 0.0054 31.3 9.5 45 140-185 311-355 (616)
282 PRK13410 molecular chaperone D 31.6 1.6E+02 0.0034 33.2 7.9 65 138-206 309-373 (668)
283 PF09663 Amido_AtzD_TrzD: Amid 30.9 1.5E+02 0.0032 30.5 6.6 71 136-211 130-202 (365)
284 KOG1394 3-oxoacyl-(acyl-carrie 30.7 36 0.00079 35.1 2.4 46 139-184 302-348 (440)
285 TIGR01991 HscA Fe-S protein as 30.4 2.9E+02 0.0062 30.6 9.6 45 140-185 295-339 (599)
286 PLN02854 3-ketoacyl-CoA syntha 30.3 2E+02 0.0043 31.5 8.0 42 140-185 387-434 (521)
287 PF09269 DUF1967: Domain of un 26.2 44 0.00095 25.9 1.7 36 76-111 11-46 (69)
288 TIGR03595 Obg_CgtA_exten Obg f 25.8 88 0.0019 24.2 3.3 34 78-111 13-46 (69)
289 PRK07591 threonine synthase; V 25.8 1.5E+02 0.0032 31.4 6.1 74 368-441 319-400 (421)
290 PLN03184 chloroplast Hsp70; Pr 24.8 2.4E+02 0.0052 31.8 7.9 63 140-206 348-410 (673)
291 CHL00094 dnaK heat shock prote 24.2 2.4E+02 0.0052 31.4 7.6 45 140-185 311-355 (621)
292 cd01453 vWA_transcription_fact 24.0 2.1E+02 0.0046 26.2 6.2 82 139-227 28-117 (183)
293 PRK13942 protein-L-isoaspartat 23.6 2E+02 0.0044 27.0 6.1 34 401-434 58-91 (212)
294 PRK00290 dnaK molecular chaper 23.5 2.6E+02 0.0055 31.2 7.7 64 139-206 308-371 (627)
295 TIGR03285 methan_mark_14 putat 23.2 1.6E+02 0.0035 30.5 5.4 42 132-173 61-104 (445)
296 PF06924 DUF1281: Protein of u 23.0 22 0.00047 31.2 -0.6 38 78-115 71-108 (134)
297 PF11394 DUF2875: Protein of u 23.0 1.6E+02 0.0034 31.1 5.3 64 381-448 374-437 (451)
298 TIGR02350 prok_dnaK chaperone 23.0 2.3E+02 0.0049 31.3 7.2 64 139-206 306-369 (595)
299 COG0776 HimA Bacterial nucleoi 22.9 1.9E+02 0.0042 23.9 5.0 45 370-430 6-50 (94)
300 PRK13411 molecular chaperone D 22.6 2.4E+02 0.0052 31.7 7.3 45 140-185 310-354 (653)
301 cd03765 proteasome_beta_bacter 22.5 1.2E+02 0.0027 29.4 4.4 32 133-164 167-198 (236)
302 PTZ00186 heat shock 70 kDa pre 22.2 3.4E+02 0.0074 30.5 8.4 63 140-206 336-398 (657)
303 PF10777 YlaC: Inner membrane 22.2 5.9E+02 0.013 23.0 8.5 52 57-109 86-140 (155)
304 TIGR03844 cysteate_syn cysteat 21.8 1.6E+02 0.0036 30.8 5.5 64 370-433 310-381 (398)
305 PTZ00009 heat shock 70 kDa pro 21.7 2.8E+02 0.006 31.1 7.5 64 140-206 315-378 (653)
306 PF08784 RPA_C: Replication pr 21.1 1.1E+02 0.0024 25.1 3.3 31 372-402 68-98 (102)
307 PF12244 DUF3606: Protein of u 20.7 93 0.002 23.1 2.4 29 369-400 20-48 (57)
308 COG2377 Predicted molecular ch 20.6 2E+02 0.0043 29.9 5.5 67 129-195 64-142 (371)
309 TIGR02714 amido_AtzD_TrzD ring 20.2 2.8E+02 0.006 28.5 6.3 32 134-165 129-161 (366)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.7e-105 Score=837.77 Aligned_cols=462 Identities=43% Similarity=0.762 Sum_probs=425.4
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHH-----HHHhhhhh-hhHHH-HHH-HHHHHHHHH-HhcCCCceEEEEeeeecCC
Q 039838 3 SDHLHSTLYETLKFLFLILVTAIEAFL-----IHQRFKPI-CHFFY-FTC-LAIILLLQF-YLSKPSVTYLVDFSCYKPP 73 (466)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~-~~~-~~~~~~~~~-~~~~~~~v~I~~~~~~~P~ 73 (466)
..|+++|+++++++ |+++++..++.+ +.++|.++ +++++ +.+ ++++|++++ +++||++|||+||+||+|+
T Consensus 35 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~ 113 (511)
T PLN02192 35 YHYLITHGMYLFLS-PLVVVIAAQLSTFSIQDLHDLWEHLKFNLISVILCSTLLVFLSTLYFLTRPRPVYLVDFSCYKPD 113 (511)
T ss_pred hHHHHhhhHHHHHH-HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCC
Confidence 47899999999888 998888888776 44577776 55554 334 666677777 8999999999999999999
Q ss_pred CCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHcCC
Q 039838 74 CFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMVLFPVIENLLSKVQI 153 (466)
Q Consensus 74 ~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi 153 (466)
+.+|++.+.++|+.+..+.|++++++|++|++++||++++||+|++.++.||+.+++++|+|+++++++|+++||+++|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~~~~~Ea~~~~~~Aa~~aL~kaGi 193 (511)
T PLN02192 114 DSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAEARKEAETVMFGAIDQLLAKTSV 193 (511)
T ss_pred ccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCCCC
Q 039838 154 SPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTGWY 233 (466)
Q Consensus 154 ~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~~ 233 (466)
+|+|||+||++||+++++|+++++|+++||+++++.+|||+||||+|+++||++|+++|+++++++||||++|.+|.+||
T Consensus 194 ~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S~n~y 273 (511)
T PLN02192 194 KPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENITLNWY 273 (511)
T ss_pred CHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEeccccCC
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHH
Q 039838 234 SGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGET 313 (466)
Q Consensus 234 ~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~ 313 (466)
.++||+++++|++|||||||+||++++.+.++++|+|.+.++++.++|++.|+|+++++|++|..|+.++|++|.+++++
T Consensus 274 ~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~a 353 (511)
T PLN02192 274 FGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDA 353 (511)
T ss_pred CCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceecccccccceeeEecchhhhhhhhh
Confidence 99999999999999999999999997655456789999999999999999999999999999999999999999999999
Q ss_pred HHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCChhhHHHHHHhH
Q 039838 314 LRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGERDIEAALMTL 393 (466)
Q Consensus 314 ~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l 393 (466)
++.+++++||.++|.+|+.++.+....+++++...+++.|+|+.+|||||+||+|++++|.++++||++++++++|++++
T Consensus 354 l~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL 433 (511)
T PLN02192 354 LKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTL 433 (511)
T ss_pred hhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCHHHHHHHHHHcCCCchhhhHHHHHH
Confidence 99999999999999888877665544555554233347789999999999999999999999999999999999999999
Q ss_pred hhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEecCCCCCCCCCCCcccccccCCCC
Q 039838 394 HRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCLRPIVGESNKGPWAGCVEEYPVMN 465 (466)
Q Consensus 394 ~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~~~~~~~~~~~~w~~~~~~~~~~~ 465 (466)
++||||||+|+||+|++++++|++++||+|||+|||+||+|++++|||+|+++++.++|||+||||+|||++
T Consensus 434 ~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~~~~~w~~~i~~yp~~~ 505 (511)
T PLN02192 434 YRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKEKNPWMDEIHEFPVDV 505 (511)
T ss_pred hHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCcccCCCchhhHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999987633499999999999986
No 2
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.2e-104 Score=833.09 Aligned_cols=462 Identities=42% Similarity=0.754 Sum_probs=424.0
Q ss_pred hhcchhHH---HHHHHHHHHHHHHHHHHHH-----HHHhhhh--h-hhHHH-HHH-HHHHHHHHH-HhcCCCceEEEEee
Q 039838 3 SDHLHSTL---YETLKFLFLILVTAIEAFL-----IHQRFKP--I-CHFFY-FTC-LAIILLLQF-YLSKPSVTYLVDFS 68 (466)
Q Consensus 3 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~-~~~~~-~~~-~~~~~~~~~-~~~~~~~v~I~~~~ 68 (466)
..|+++|+ ++++++ |+++++..++.+ +.++|.. + +++++ ++| ++++|++++ +|+||++||++||+
T Consensus 42 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~ 120 (521)
T PLN02854 42 YGYSCNPATILFFLIIL-PLTIATLVQITGLEFDTVSELWSNQALHLDTATRLTGSAFLLFLLGLYWAKRSKPVYLVDFA 120 (521)
T ss_pred hHHHHhhhHHHHHHHHH-HHHHHHHHHHhcCCHHHHHHHHHHhhhHHhHHHHHHHHHHHHHHHHHHHHcCCCcEEEEeee
Confidence 47899999 455666 988888888766 4557776 4 45554 334 667777777 89999999999999
Q ss_pred eecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 039838 69 CYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMVLFPVIENLL 148 (466)
Q Consensus 69 ~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL 148 (466)
||+|++.+|++.+.++|+.+..+.|++++++|++|++++||++++||+|++.++.||+.+++++|+|++++++.|+++||
T Consensus 121 c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~~~~~~~~~r~ea~~v~~~~~~~lL 200 (521)
T PLN02854 121 CYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRPPNLCMEEARAEAEAVMFGALDSLF 200 (521)
T ss_pred eecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccc
Q 039838 149 SKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEIL 228 (466)
Q Consensus 149 ~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~ 228 (466)
+++|++|+|||+||++||+++++|+++++|+++||+++++.+|||+||||+|+++||++|+++++++++++||||++|.+
T Consensus 201 ~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~ 280 (521)
T PLN02854 201 SKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENI 280 (521)
T ss_pred HHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeee
Confidence 99999999999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCcceEecchhhH
Q 039838 229 STGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQ 308 (466)
Q Consensus 229 s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~ 308 (466)
|.+||.++||++++++++|||||||+||++++.++++++|+|.++++++.++|++.|+|+++++|+.|..|+++++++|.
T Consensus 281 S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~ 360 (521)
T PLN02854 281 TLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMA 360 (521)
T ss_pred ecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEEeccCCCCcccccccccccc
Confidence 99999999999999999999999999999976444567999999999999999999999999988888778899999999
Q ss_pred HHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCChhhHHH
Q 039838 309 IAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGERDIEA 388 (466)
Q Consensus 309 ~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~e~~~~ 388 (466)
+++++++.|++++||.|+|++++++|+...+.+.+.+.+..++.|||++||||||+||+|++++|+++++||++++++++
T Consensus 361 va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~ 440 (521)
T PLN02854 361 VAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEP 440 (521)
T ss_pred hhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccc
Confidence 98999999999999999999999999988776665543334456799999999999999999999999999999999999
Q ss_pred HHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEecCCCCC-CCCCCCcccccccCCCC
Q 039838 389 ALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCLRPIVGE-SNKGPWAGCVEEYPVMN 465 (466)
Q Consensus 389 s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~~~~~~~-~~~~~w~~~~~~~~~~~ 465 (466)
|++++++||||||||+||+|++++++|++++||+|||+|||+||+|++++|||+|+++++ +++|||+||||+|||++
T Consensus 441 sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 518 (521)
T PLN02854 441 SRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALREIPTGESTGNPWADSIDRYPVKV 518 (521)
T ss_pred hHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEeccCCccccCCCCchhhHhhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998853 24699999999999986
No 3
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.6e-104 Score=828.10 Aligned_cols=461 Identities=41% Similarity=0.726 Sum_probs=426.1
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHH-----HHHhhhhh-hhHHH-HHH-HHHHHHHHH-HhcCCCceEEEEeeeecCC
Q 039838 3 SDHLHSTLYETLKFLFLILVTAIEAFL-----IHQRFKPI-CHFFY-FTC-LAIILLLQF-YLSKPSVTYLVDFSCYKPP 73 (466)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~-~~~-~~~~~~~~~-~~~~~~~v~I~~~~~~~P~ 73 (466)
+||+++|+++++++ |+++++..++.+ +..+|.++ +++++ +.+ ++++|++++ +|+||++||++||+||+|+
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~p~ 79 (478)
T PLN02932 1 FNYLMAHRFKLCFL-PLMVGIAMEASRLSTQDLQNFYLYLQNNLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPP 79 (478)
T ss_pred ChhHHHhHHHHHHH-HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeecCc
Confidence 48999999999888 998888888776 44567665 44543 233 566666666 8999999999999999999
Q ss_pred CCCCCChHHHHHhhccc---cCCChhh---HHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 039838 74 CFCRVPFSSFLENSSLV---ETFDSES---MAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMVLFPVIENL 147 (466)
Q Consensus 74 ~~~rv~~e~~~~~~~~~---~~~~~~~---~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~a 147 (466)
+.+|++.+.++|+.+.. +.|++++ ++|++||+++|||++|+|+|+..+..|++.+++++++|+++|+++|+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~~ea~~la~~Aa~~a 159 (478)
T PLN02932 80 SHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSRKETEEVIIGAVDNL 159 (478)
T ss_pred ccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998665 7898888 99999999999999999999999989999999999999999999999999
Q ss_pred HHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc
Q 039838 148 LSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEI 227 (466)
Q Consensus 148 L~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~ 227 (466)
|+++|++|+|||+||++|+.++++|+++++|+++||+++++.+|||+||||+|+++||++|+++++++++++||||++|.
T Consensus 160 L~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~ 239 (478)
T PLN02932 160 FRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTEN 239 (478)
T ss_pred HHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEee
Confidence 99999999999999999887789999999999999998899999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCcceEecchhh
Q 039838 228 LSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLL 307 (466)
Q Consensus 228 ~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~ 307 (466)
+|.+||.+++|++++++++|||||||+||++++.+.++++|+|.++++++.++|++.|+|+++++|++|..|+.+++++|
T Consensus 240 ~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp 319 (478)
T PLN02932 240 ITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLP 319 (478)
T ss_pred cccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccch
Confidence 99999888888999999999999999999997754345799999999999999999999999999888888999999999
Q ss_pred HHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCChhhHH
Q 039838 308 QIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGERDIE 387 (466)
Q Consensus 308 ~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~e~~~ 387 (466)
.+++++++.|++++||.++|.+|+++++++.+.+++++...+++.|+|+++|||||+||+|++++|+++++||+++++++
T Consensus 320 ~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e 399 (478)
T PLN02932 320 MVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVE 399 (478)
T ss_pred HHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHH
Confidence 99999999999999999999999999999988888876333448889999999999999999999999999999999999
Q ss_pred HHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEecCCCCCCCCCCCcccccccCCCC
Q 039838 388 AALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCLRPIVGESNKGPWAGCVEEYPVMN 465 (466)
Q Consensus 388 ~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~~~~~~~~~~~~w~~~~~~~~~~~ 465 (466)
+|++++++||||||||+||+|++++++|++++||+|||+|||+||+||+++||++|+++++ ++|||+||||+|||++
T Consensus 400 ~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~-~~~~w~~~i~~yp~~~ 476 (478)
T PLN02932 400 ASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPS-ANNPWEDCLHKYPVEI 476 (478)
T ss_pred HHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCc-CCCCchhhHhhCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999987 5799999999999986
No 4
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7.5e-103 Score=819.77 Aligned_cols=462 Identities=44% Similarity=0.808 Sum_probs=423.3
Q ss_pred chhcchhHHHHHHHHHHHHHHHHHHHHH-----HHHhhhhh-hhHHH-HHH-HHHHHHHHH-HhcCCCceEEEEeeeecC
Q 039838 2 LSDHLHSTLYETLKFLFLILVTAIEAFL-----IHQRFKPI-CHFFY-FTC-LAIILLLQF-YLSKPSVTYLVDFSCYKP 72 (466)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~-~~~-~~~~~~~~~-~~~~~~~v~I~~~~~~~P 72 (466)
...|+++|+++++++ |+++++..++.+ +.++|..+ +++++ +++ ++++|++++ +|+||++||++||+||+|
T Consensus 30 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p 108 (502)
T PLN02377 30 GYHYLISNLLTLCFI-PLIIIISIEASQMNPDDLRQLWIHLQYNLVSIIICSAFLVFGLTVYIMTRPRPVYLVDYSCYRA 108 (502)
T ss_pred hhHHHHhhhHHHHHH-HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEeeeeecC
Confidence 347899999999888 998888888776 44577665 55554 334 666777767 899999999999999999
Q ss_pred CCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHcC
Q 039838 73 PCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMVLFPVIENLLSKVQ 152 (466)
Q Consensus 73 ~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~ag 152 (466)
++.+|++.+.++|+.+..+.|++++++|++|+++++||++++|+|+..++.||+.+++++++|+++++++|+++||+++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~~~~~~~ea~~l~~~A~~~aL~kaG 188 (502)
T PLN02377 109 PDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPSMAAAREEAEQVMFGALDNLFANTN 188 (502)
T ss_pred CccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCCC
Q 039838 153 ISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTGW 232 (466)
Q Consensus 153 i~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~ 232 (466)
++|+|||+||++||+++++|+++++|+++||+++++.+|||+||||+|+++||++|+++++++++++||||++|.+|.+|
T Consensus 189 i~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~ 268 (502)
T PLN02377 189 VNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNW 268 (502)
T ss_pred CCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEecccccc
Confidence 99999999999999999999999999999999989999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHH
Q 039838 233 YSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGE 312 (466)
Q Consensus 233 ~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~ 312 (466)
|.++++++++++++|||||||+||++++.+.++++|++.++++++.++|++.|+++++++|+.|..|+++++++|.++|+
T Consensus 269 ~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~ 348 (502)
T PLN02377 269 YFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGE 348 (502)
T ss_pred CCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeeeccccCCCCCCCCCcchhhHhhH
Confidence 88888888999999999999999999765555678999899999999999999999999887888889999999999999
Q ss_pred HHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCChhhHHHHHHh
Q 039838 313 TLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGERDIEAALMT 392 (466)
Q Consensus 313 ~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~ 392 (466)
+++.|++++||.++|.+|++.+......+++++...+++.|+|++||||||+||+|++++++++++||++++++++|+++
T Consensus 349 ~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~t 428 (502)
T PLN02377 349 ALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMT 428 (502)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCCCHHHHHHHHHHcCCCcccchHHHHH
Confidence 99999999999999999988876665555554422222557889999999999999999999999999999999999999
Q ss_pred HhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEecCCCCCCCCCCCcccccccCCCC
Q 039838 393 LHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCLRPIVGESNKGPWAGCVEEYPVMN 465 (466)
Q Consensus 393 l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~~~~~~~~~~~~w~~~~~~~~~~~ 465 (466)
+++||||||||+||+|++++++|++++||+|||+|||+||+|++++|||+|+++++ ++|||+||||+|||++
T Consensus 429 L~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~~-~~~~w~~~i~~yp~~~ 500 (502)
T PLN02377 429 LHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPS-NNSPWEDCIDKYPVKL 500 (502)
T ss_pred HHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCCC-CCCCchhhHhhCCCcc
Confidence 99999999999999999999999999999999999999999999999999999987 6799999999999986
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=6.5e-97 Score=762.26 Aligned_cols=424 Identities=41% Similarity=0.765 Sum_probs=397.5
Q ss_pred HHHHHHHHHHHH-HhcCCCceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCcc
Q 039838 43 FTCLAIILLLQF-YLSKPSVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQ 121 (466)
Q Consensus 43 ~~~~~~~~~~~~-~~~~~~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~ 121 (466)
+.|++++.++++ +++||++||++||+||+|++.+|++.+.++|+.+..+.|++++.+|++||+++|||++++|.|+..+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~ 119 (466)
T PLN00415 40 IGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCML 119 (466)
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccc
Confidence 456444334444 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHH
Q 039838 122 YIPPKTNQQESIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSAS 201 (466)
Q Consensus 122 ~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~ 201 (466)
..||..+++++++|+++.+++|++++|+++|++|+|||+||++||+++++|+++++|+++||+++++.+|||++|||+|+
T Consensus 120 ~~~~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsgg 199 (466)
T PLN00415 120 TSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAG 199 (466)
T ss_pred cCCCCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHH
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCC
Q 039838 202 ALAIDMAQALLKTQKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFD 281 (466)
Q Consensus 202 l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d 281 (466)
+.||++|+++++++++++||||++|.+|.++|+++|+++++++++|||||||+||++++.++++++|+|.+++++|.+.+
T Consensus 200 v~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~~ 279 (466)
T PLN00415 200 AISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSS 279 (466)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCCC
Confidence 99999999999999999999999999999888888999999999999999999999987665568999999999999988
Q ss_pred ccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccE
Q 039838 282 DKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQH 361 (466)
Q Consensus 282 ~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~ 361 (466)
++.|.|++|.+|++|..|+.++|++|.+++++++.|+++++|.++|.+|+++++...+.++++.++..++.|||...++|
T Consensus 280 d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~~~~h 359 (466)
T PLN00415 280 DKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKH 359 (466)
T ss_pred hhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCcccccee
Confidence 88999999999999988999999999999999999999999999999999999999888887654445588898888999
Q ss_pred EEecCCCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEE
Q 039838 362 FCLPVSGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 362 ~~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
||+|+||++|+|++++.||++++++++|+++|+|||||||+|+||+|+++++++++++||++||+|||+||+|++++||+
T Consensus 360 f~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~es~v~~~ 439 (466)
T PLN00415 360 FCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVWRA 439 (466)
T ss_pred EEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchhhHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCC--CCCCcccccccCCCCC
Q 039838 442 LRPIVGESN--KGPWAGCVEEYPVMNS 466 (466)
Q Consensus 442 ~~~~~~~~~--~~~w~~~~~~~~~~~~ 466 (466)
+|+++++.+ .|||+||||+|||++.
T Consensus 440 ~~~~~~~~~~~~~~w~~~i~~yp~~~~ 466 (466)
T PLN00415 440 LRTIPANESLVGNPWGDSVHKYPVHVT 466 (466)
T ss_pred hccCCcccccCCCCchhhHHhCCCCCC
Confidence 999987622 3999999999999863
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=9.3e-74 Score=555.68 Aligned_cols=289 Identities=49% Similarity=0.862 Sum_probs=283.1
Q ss_pred HhcCCCceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHH
Q 039838 55 YLSKPSVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIK 134 (466)
Q Consensus 55 ~~~~~~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ 134 (466)
+++||++|||+||+||+|++.+|++.++++++++..+.|++++++|++||+++||++++||+|+..++.||+.++.++++
T Consensus 2 ~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~~ 81 (290)
T PF08392_consen 2 FMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAARE 81 (290)
T ss_pred ccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 135 EAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 135 ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
|++++++.|++++|+|+|++|+|||+||+|||.++|+||+++||+|+|||++++.+||++||||++++.+|++|+++|+.
T Consensus 82 Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~ 161 (290)
T PF08392_consen 82 EAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQA 161 (290)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccC
Q 039838 215 QKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDS 294 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~ 294 (466)
+|+.+||||++|++|.+||.++||+|+++||||||||||+|||+++.+++++||+|.|++|||.+++|++|.|++|+||+
T Consensus 162 ~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD~ 241 (290)
T PF08392_consen 162 HPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEEDE 241 (290)
T ss_pred CCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEcC
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred CCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhh
Q 039838 295 NGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGF 343 (466)
Q Consensus 295 ~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~ 343 (466)
+|..|++++|+++.++|++++.||+++||+|||.+|+++|+++.+.|++
T Consensus 242 ~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk~ 290 (290)
T PF08392_consen 242 EGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARKV 290 (290)
T ss_pred CCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999877653
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=5.4e-57 Score=449.29 Aligned_cols=318 Identities=20% Similarity=0.285 Sum_probs=272.4
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHH
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMV 139 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 139 (466)
++++|.++|.|+|++. ++|+++.+..... + ++|..++||++|++..+++ +.+ +|
T Consensus 2 ~~a~i~g~G~~lP~~~--vtn~d~e~~~~ts----d------ewI~~rtGir~R~~a~~~e-------~~s-------~l 55 (323)
T COG0332 2 MNAKILGIGSYLPERV--VTNADLEKRVDTS----D------EWIETRTGIRERRIAADDE-------TTS-------DL 55 (323)
T ss_pred CcceEEEEEeecCCcc--cChHHHHhccCCC----c------ceeeeecCCceeeecCCCc-------cHH-------HH
Confidence 4789999999999997 9999998654432 2 3799999999999987642 333 49
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDS 218 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~ 218 (466)
+++|+++||+++|++|+|||+||+++ ||+++.|++|++||++||+. ++.+||++. +|+|+++||++|..++++|.++
T Consensus 56 a~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~a-aCsgf~yaL~~A~~~i~sG~~k 133 (323)
T COG0332 56 AVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQA-ACSGFLYALSVADGLIRSGGYK 133 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeechh-hhHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999975 78999999999999999998 699999997 9999999999999999999999
Q ss_pred eEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCc
Q 039838 219 DALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKL 298 (466)
Q Consensus 219 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~ 298 (466)
+||||++|++|+.. +++||.+ +.+|||||+|+||++.+.+. ++..++.++|++.++.++.+......
T Consensus 134 ~vLVVg~e~~S~~l-d~~dR~t---~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~- 200 (323)
T COG0332 134 NVLVVGAETLSRIL-DWTDRDT---CVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT- 200 (323)
T ss_pred EEEEEehhHhhccC-CHhhccc---eEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc-
Confidence 99999999999876 6688864 78999999999999987332 35567788999888766655321110
Q ss_pred ceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHH---hhhhccCCCCCCCccccccEEEecCCCHHHHHHH
Q 039838 299 GVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKK---GFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREI 375 (466)
Q Consensus 299 g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~---~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l 375 (466)
++. + . ..+..+|.+.++|+++++.+.+ ++|+ +++ +. ++|||||++||+|.++++.+
T Consensus 201 ----~~~------~-----~-~~~~~~m~Gr~vfk~av~~~~~~~~~~L~-~~~-l~---~~dId~~vpHQan~ri~~~i 259 (323)
T COG0332 201 ----PKE------E-----S-GGGLLVMDGREVFKFAVRAMPKAIEEVLE-KAG-LT---PEDIDWFVPHQANLRIIEAI 259 (323)
T ss_pred ----ccc------c-----c-cccceeeccHHHHHHHHHHHHHHHHHHHH-HcC-CC---HHHCCEEccccccHHHHHHH
Confidence 000 0 0 0234556778999999988764 5677 677 87 69999999999999999999
Q ss_pred HHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEe
Q 039838 376 AKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCL 442 (466)
Q Consensus 376 ~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~ 442 (466)
++.|+++++|+ ..++++|||||++|+|++|+++.++|++|+||++++.+||.|++|+++++||.
T Consensus 260 ~~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 260 AKKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred HHHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 99999999999 79999999999999999999999999999999999999999999999999983
No 8
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=4.8e-52 Score=429.01 Aligned_cols=349 Identities=17% Similarity=0.232 Sum_probs=270.2
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccCC-C-hhhHHHHHHHHHHcCCCCeeecCC-Cc-cC-------CCCC--
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETF-D-SESMAFMSKVLTCSGQSEETYLPP-AL-QY-------IPPK-- 126 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~-~-~~~~~f~~~i~~~sGi~~r~~~~~-~~-~~-------~~~~-- 126 (466)
.+++|.++|+..|++. ++++++.+.+.....- + .+..+.+++|++++||++|+..-+ .. .. .+|.
T Consensus 15 ~~~~I~~igta~P~~~--~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPANC--VSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCCcc--ccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 4689999999999997 9999999987643210 1 222333678999999999986432 11 11 1121
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHH
Q 039838 127 TNQQESIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAID 206 (466)
Q Consensus 127 ~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~ 206 (466)
..++.+.+++.+|+.+|+++||+++|++++|||+||+++++....|+++.+|+++||+++++.++.+.+|||+|++.||+
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~ 172 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLR 172 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHH
Confidence 23666889999999999999999999999999999986544445999999999999999777665444469999999999
Q ss_pred HHHHHHhcCCCCeEEEEEeccccCCCCCCCC--cccccccccccccceeEEEeecCCCc-ccCcceEeeEEeeee-cCCc
Q 039838 207 MAQALLKTQKDSDALVLSTEILSTGWYSGNE--KPKLLLNCLFRMGSVAVLLTNKKQAK-RSSKYKVVRTVRTNK-AFDD 282 (466)
Q Consensus 207 lA~~ll~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~-~~d~ 282 (466)
+|++++++++.++||||++|.+|..++...| +++++.+++|||||+|+||++++... .++.|++.+..++.. .+++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~~ 252 (393)
T PLN03172 173 LAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSDG 252 (393)
T ss_pred HHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCcc
Confidence 9999999999999999999999976544444 34567789999999999999865432 235677776544333 3333
Q ss_pred cccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEE
Q 039838 283 KAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHF 362 (466)
Q Consensus 283 ~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~ 362 (466)
. +...... .| .++.+++++|....+.+... .+++|+ +.+ +. ..|+++|
T Consensus 253 ~-~~~~i~~---~G-~~~~l~~~vp~~~~~~i~~~----------------------~~~~L~-~~g-l~---~~di~~~ 300 (393)
T PLN03172 253 A-IDGHLRE---VG-LTFHLLKDVPGLISKNIEKS----------------------LVEAFA-PIG-IN---DWNSIFW 300 (393)
T ss_pred c-ccceEEc---CC-cEEEEechHHHHHHHHHHHH----------------------HHHHhh-hcC-CC---ccccceE
Confidence 2 2211111 23 34667788887654433322 234565 566 66 5899999
Q ss_pred EecCCCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHH----HcCCCCCC---CEEEEEeechhhhhc
Q 039838 363 CLPVSGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYME----AKERVKKG---DRVWLIGAGTGSKCG 435 (466)
Q Consensus 363 ~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~----~~g~i~~G---d~vllia~GsG~~~~ 435 (466)
++||+|+++++.+++.||++++++.+|+.++++||||||+|+++.|+++. ++|++++| |++++++||+|++++
T Consensus 301 ~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~ 380 (393)
T PLN03172 301 IAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVE 380 (393)
T ss_pred EecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceee
Confidence 99999999999999999999999999999999999999999999999986 45778777 899999999999999
Q ss_pred ceeEEEe
Q 039838 436 SVVLQCL 442 (466)
Q Consensus 436 s~v~r~~ 442 (466)
++++||.
T Consensus 381 ~~ll~~~ 387 (393)
T PLN03172 381 TVVLHSV 387 (393)
T ss_pred eeeeEec
Confidence 9999994
No 9
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=3.5e-52 Score=427.47 Aligned_cols=345 Identities=32% Similarity=0.493 Sum_probs=268.2
Q ss_pred ceEEEEeeeecCCCCCCCChHHHHHhhccccC--CChhhHHHHHHHHHHcCCCCeeecCC--CccC-------CCCCCCH
Q 039838 61 VTYLVDFSCYKPPCFCRVPFSSFLENSSLVET--FDSESMAFMSKVLTCSGQSEETYLPP--ALQY-------IPPKTNQ 129 (466)
Q Consensus 61 ~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~~~--~~~~-------~~~~~~~ 129 (466)
.+||.++++|+|++. ++|+++.+++..... +.+..+++.++|++++||++|+++.+ .... ...+...
T Consensus 1 ~~~I~~~~~~~P~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (361)
T cd00831 1 AATILAIGTAVPPHR--VPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERN 78 (361)
T ss_pred CcEEEEEEEeCCCCc--CCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcch
Confidence 379999999999997 999999998764321 11345666789999999999999865 2211 1233456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHH
Q 039838 130 QESIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQ 209 (466)
Q Consensus 130 ~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~ 209 (466)
..+.+++.+|+.+|++++|+++|++|+|||+||++++.++..|+++.+|+++||+++++.+||++++||+|++.||++|+
T Consensus 79 ~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~ 158 (361)
T cd00831 79 DIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAK 158 (361)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHH
Confidence 77889999999999999999999999999999998766788999999999999998779999999779999999999999
Q ss_pred HHHhcCCCCeEEEEEeccccCCCCCCCC-cccccccccccccceeEEEeecCCCcc--cCcceEeeEEeeeecCCccccc
Q 039838 210 ALLKTQKDSDALVLSTEILSTGWYSGNE-KPKLLLNCLFRMGSVAVLLTNKKQAKR--SSKYKVVRTVRTNKAFDDKAYN 286 (466)
Q Consensus 210 ~ll~~~~~~~aLVVs~E~~s~~~~~~~d-r~~l~~~~lfgDGAaA~lLs~~~~~~~--~~~~~L~~~~~t~~~~d~~~~~ 286 (466)
+++++++.++||||++|..|..+ ++.| +.+.+.+++|||||+|+||++++.... ...+++.+....... +. ..
T Consensus 159 ~~~~~~~~~~aLvv~~e~~s~~~-~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p-~~--~~ 234 (361)
T cd00831 159 DLLEANPGARVLVVSTELCSLWY-RGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLP-DS--ED 234 (361)
T ss_pred HHHHHCCCCEEEEEEeeccccee-CCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeee-cC--CC
Confidence 99999999999999999999844 5555 666667899999999999998765321 123444332111111 11 00
Q ss_pred cCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccC--CCCCCCccccccEEEe
Q 039838 287 SGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSC--DVYVPNFKAAVQHFCL 364 (466)
Q Consensus 287 ~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~--~~~~pd~~~did~~~~ 364 (466)
.+....+. ....+.++++++. .+...+..+.+++|+ +. + +. .+|||+|++
T Consensus 235 ~~~~~~~~-~~~~~~~~~~v~~----------------------~~~~~~~~~i~~~L~-~~~~g-~~---~~did~~~~ 286 (361)
T cd00831 235 AMGWHLGE-EGLTFVLSRDVPR----------------------LVEKNLERVLRKLLA-RLGIG-LF---KLAFDHWCV 286 (361)
T ss_pred ceEEEEEc-ceEEEEeChhHHH----------------------HHHHHHHHHHHHHhc-cccCC-Cc---cccceEEEE
Confidence 00000000 1111122222221 112223334456777 66 6 77 689999999
Q ss_pred cCCCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeE
Q 039838 365 PVSGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVL 439 (466)
Q Consensus 365 H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~ 439 (466)
||+|+++++.+++.||++++++++|+.++++||||||+|+|+.|++++++|++++||+|++++||+|++|++++|
T Consensus 287 H~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 287 HPGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 999999999999999999999998999999999999999999999999999999999999999999999999986
No 10
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=4.4e-51 Score=422.59 Aligned_cols=352 Identities=15% Similarity=0.215 Sum_probs=261.8
Q ss_pred cCCCceEEEEeeeecCCCCCCCChHHHHHhhcc-ccCCChhhHHHHHHHHHHcCCCCeeecCCCc--cC-----CCCCCC
Q 039838 57 SKPSVTYLVDFSCYKPPCFCRVPFSSFLENSSL-VETFDSESMAFMSKVLTCSGQSEETYLPPAL--QY-----IPPKTN 128 (466)
Q Consensus 57 ~~~~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~-~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~--~~-----~~~~~~ 128 (466)
..|.+++|.++|+++|++. ++|+++.+.+.. .+.-++...+.++||++++||++|+++.+.. .. .+...+
T Consensus 17 ~~~~~~~I~gigt~~P~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 94 (391)
T PLN03169 17 ANPGKATILALGKAFPSQL--VPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPT 94 (391)
T ss_pred CCCCCeEEEEEEeeCCCee--cCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCC
Confidence 4677899999999999997 999999985443 2111222334467899999999999874211 00 011112
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCc-eEEEecCCcchHHHH
Q 039838 129 ----QQESIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDI-KNFNLSGMGCSASAL 203 (466)
Q Consensus 129 ----~~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~-~~~dl~~mgCs~~l~ 203 (466)
+..+.|.+.+|+.+|+++||+++|++|+|||+||+++++++..|+++.+|+++||+++++ .++|++. ||+|+++
T Consensus 95 ~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~-gC~g~~~ 173 (391)
T PLN03169 95 IKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFL-GCSGGVA 173 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccC-hhHHHHH
Confidence 334678899999999999999999999999999998767999999999999999998776 4799995 9999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccccCCCCCCC-C-cccccccccccccceeEEEeecCCCc-ccCcceEeeEEeeeecC
Q 039838 204 AIDMAQALLKTQKDSDALVLSTEILSTGWYSGN-E-KPKLLLNCLFRMGSVAVLLTNKKQAK-RSSKYKVVRTVRTNKAF 280 (466)
Q Consensus 204 aL~lA~~ll~~~~~~~aLVVs~E~~s~~~~~~~-d-r~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~~ 280 (466)
||++|.+++++++.++||||++|.++..++... + ....+..++|||||+|+||++++... ....|++.........
T Consensus 174 aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~ip- 252 (391)
T PLN03169 174 GLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFLP- 252 (391)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEcC-
Confidence 999999999999999999999999987664221 1 22334578999999999999865421 1123443322111111
Q ss_pred CccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCcccccc
Q 039838 281 DDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQ 360 (466)
Q Consensus 281 d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did 360 (466)
++. ..+-+.....| ..+.+++++|....+. +..+.+++|+ +++ +. .+|+|
T Consensus 253 ~~~--~~~~~~~~~~g-~~~~~g~~v~~~~~~~----------------------~~~~i~~~L~-~~g-l~---~~did 302 (391)
T PLN03169 253 GTE--KTIDGRLTEEG-INFKLGRELPQKIEDN----------------------IEGFCKKLMK-KAG-LV---EKDYN 302 (391)
T ss_pred CCc--cccCceecCCc-eEEEECcHHHHHHHHH----------------------HHHHHHHHHH-HcC-CC---CCCCC
Confidence 110 00000001111 1223334444332111 1223356777 677 76 46788
Q ss_pred --EEEecCCCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCC---CCCEEEEEeechhhhhc
Q 039838 361 --HFCLPVSGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVK---KGDRVWLIGAGTGSKCG 435 (466)
Q Consensus 361 --~~~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~---~Gd~vllia~GsG~~~~ 435 (466)
+|++||+|+++++.+++.||+++|++.+|++++++||||||+|+|+.|++++++++++ +||++++++||+|++|+
T Consensus 303 ~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s~~ 382 (391)
T PLN03169 303 DLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGITFE 382 (391)
T ss_pred cceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHhHH
Confidence 9999999999999999999999999988899999999999999999999999888876 69999999999999999
Q ss_pred ceeEEEe
Q 039838 436 SVVLQCL 442 (466)
Q Consensus 436 s~v~r~~ 442 (466)
++++||.
T Consensus 383 ~~ll~~~ 389 (391)
T PLN03169 383 GILARNL 389 (391)
T ss_pred HHHHhhh
Confidence 9999984
No 11
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=5.6e-51 Score=420.82 Aligned_cols=351 Identities=17% Similarity=0.229 Sum_probs=267.1
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccC--CChhhHHHHHHHHHHcCCCCeeecCC-Cc---cC-----CCC--C
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVET--FDSESMAFMSKVLTCSGQSEETYLPP-AL---QY-----IPP--K 126 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~~~-~~---~~-----~~~--~ 126 (466)
.+++|.++|+..|++. ++++++.+.+..... -.+...+.++||++++||++|+.+-+ .. +. .+| +
T Consensus 15 ~~~~i~~i~ta~P~~~--~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPPNC--VDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCCcc--cCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 4689999999999997 999999998865421 12233444788999999999976432 11 10 011 1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHH
Q 039838 127 TNQQESIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAID 206 (466)
Q Consensus 127 ~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~ 206 (466)
..++.+.+++.+|+.+|+++||+++|++++|||+||++++.....|+++.+|+++||+++++..+.+.+|||+|++.||+
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~ 172 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHH
Confidence 23566889999999999999999999999999999987543444899999999999999777655444469999999999
Q ss_pred HHHHHHhcCCCCeEEEEEeccccCCCCCCCCc--ccccccccccccceeEEEeecCCCc-ccCcceEeeEEeeee-cCCc
Q 039838 207 MAQALLKTQKDSDALVLSTEILSTGWYSGNEK--PKLLLNCLFRMGSVAVLLTNKKQAK-RSSKYKVVRTVRTNK-AFDD 282 (466)
Q Consensus 207 lA~~ll~~~~~~~aLVVs~E~~s~~~~~~~dr--~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~-~~d~ 282 (466)
+|++++++++.++||||++|.+|..++.++|+ ++++.+++|||||+|+||++++... .+++|++.+..+... .+++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~~ 252 (391)
T PLN03173 173 LAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSDG 252 (391)
T ss_pred HHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCcc
Confidence 99999999999999999999999755444443 4556789999999999999854321 224577665433322 2333
Q ss_pred cccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEE
Q 039838 283 KAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHF 362 (466)
Q Consensus 283 ~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~ 362 (466)
. +. +.-...| .++.+++++|.+..+.+. .+.+++|+ +.+ +. ..|+|+|
T Consensus 253 ~-~~---~~i~~~G-~~~~l~~~vp~~~~~~~~----------------------~~i~~~L~-~~g-l~---~~di~~~ 300 (391)
T PLN03173 253 A-ID---GHLREVG-LTFHLLKDVPGLISKNVE----------------------KSLTEAFK-PLG-IS---DWNSLFW 300 (391)
T ss_pred c-ee---eEEEcCc-eEEEEecHHHHHHHHHHH----------------------HHHHHHHH-hcC-CC---ccccCeE
Confidence 2 21 1111123 345567777765433222 22345666 667 76 5899999
Q ss_pred EecCCCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHc----CCCCCC---CEEEEEeechhhhhc
Q 039838 363 CLPVSGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAK----ERVKKG---DRVWLIGAGTGSKCG 435 (466)
Q Consensus 363 ~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~----g~i~~G---d~vllia~GsG~~~~ 435 (466)
++||+|+++++.+++.||+++|++.+|++++++||||||+|+|+.|+++.++ |.+++| +++++++||+||+++
T Consensus 301 v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e 380 (391)
T PLN03173 301 IAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVE 380 (391)
T ss_pred EECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHH
Confidence 9999999999999999999999999999999999999999999999999863 444333 889999999999999
Q ss_pred ceeEEEecC
Q 039838 436 SVVLQCLRP 444 (466)
Q Consensus 436 s~v~r~~~~ 444 (466)
+++++|..|
T Consensus 381 ~~ll~~~~~ 389 (391)
T PLN03173 381 TVVLHSVAP 389 (391)
T ss_pred HHHHhhccC
Confidence 999998543
No 12
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=9.9e-51 Score=419.25 Aligned_cols=350 Identities=15% Similarity=0.204 Sum_probs=262.0
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccC--CChhhHHHHHHHHHHcCCCCeeecC-CCcc-CC-------CC--C
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVET--FDSESMAFMSKVLTCSGQSEETYLP-PALQ-YI-------PP--K 126 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~~-~~~~-~~-------~~--~ 126 (466)
.+++|.++|+..|++. ++++++.+.+..... -.++..+.++||++++||++|+..- +... .. +| +
T Consensus 14 ~~~~i~~i~ta~P~~~--~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPPAE--FLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCCcc--cCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 4689999999999997 999999998765421 1223344578899999999998643 2111 11 11 1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCc-eEEEecCCcchHHHHHH
Q 039838 127 TNQQESIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDI-KNFNLSGMGCSASALAI 205 (466)
Q Consensus 127 ~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~-~~~dl~~mgCs~~l~aL 205 (466)
..++.+.+++.+|+.+|+++||+++|++++|||+||++|++.+..|+++++|+++||+++++ +++|++. ||+|+++||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~-gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQT-GCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCC-ccHHHHHHH
Confidence 12566889999999999999999999999999999997543456899999999999998665 4788885 999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccccCCCCCCCC--cccccccccccccceeEEEeecCCCc-ccCcceEeeEEeeeecCCc
Q 039838 206 DMAQALLKTQKDSDALVLSTEILSTGWYSGNE--KPKLLLNCLFRMGSVAVLLTNKKQAK-RSSKYKVVRTVRTNKAFDD 282 (466)
Q Consensus 206 ~lA~~ll~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~~d~ 282 (466)
++|++++++++.++||||++|.+|..++...+ .++++.+++|||||+|+||++++... .++.|++.....+... +.
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p-~s 249 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILP-ES 249 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEc-CC
Confidence 99999999999999999999999987643221 33456789999999999999865421 1233444332222222 11
Q ss_pred cccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEE
Q 039838 283 KAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHF 362 (466)
Q Consensus 283 ~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~ 362 (466)
..... +.-++.| ..+.+++++|.+..+.++ .+.+++++ +.+ .. ..|+++|
T Consensus 250 ~~~~~--~~~~~~g-~~~~l~~~vp~~i~~~~~----------------------~~l~~~l~-~~~-~~---~~d~~~~ 299 (389)
T PLN03168 250 DGAID--GHLTEAG-LIFHLMKDVPGLISKNIE----------------------KFLNEARK-CVG-SP---DWNEMFW 299 (389)
T ss_pred CCccC--ceEecCc-eEEEECHHHHHHHHHHHH----------------------HHHHHHHH-hcC-CC---ccccceE
Confidence 11111 1111122 234556666654432222 22334454 445 43 3577899
Q ss_pred EecCCCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCC--------CEEEEEeechhhhh
Q 039838 363 CLPVSGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKG--------DRVWLIGAGTGSKC 434 (466)
Q Consensus 363 ~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~G--------d~vllia~GsG~~~ 434 (466)
++||+|+++++.+++.||+++|++..|+.++++||||||+|+|+.|+++.++ ++++| |++++++||+|++|
T Consensus 300 v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t~ 378 (389)
T PLN03168 300 AVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLTL 378 (389)
T ss_pred EecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhhh
Confidence 9999999999999999999999999999999999999999999999998765 55554 89999999999999
Q ss_pred cceeEEEecC
Q 039838 435 GSVVLQCLRP 444 (466)
Q Consensus 435 ~s~v~r~~~~ 444 (466)
+++++||..+
T Consensus 379 ~~~llr~~~~ 388 (389)
T PLN03168 379 EVLVLRAAAN 388 (389)
T ss_pred hhhhheeccc
Confidence 9999999654
No 13
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=1.1e-49 Score=412.83 Aligned_cols=350 Identities=15% Similarity=0.205 Sum_probs=266.8
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccCC-C-hhhHHHHHHHHHHcCCCCeeecCCCc-c-CC-------CCC--
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETF-D-SESMAFMSKVLTCSGQSEETYLPPAL-Q-YI-------PPK-- 126 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~-~-~~~~~f~~~i~~~sGi~~r~~~~~~~-~-~~-------~~~-- 126 (466)
.+.+|.++|+..|++. ++++++.+.+...... + ++..+.++||++++||++|+.+-+.+ . .. +|.
T Consensus 19 ~~~~i~~i~ta~P~~~--~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPANC--VHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCCcc--ccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 3589999999999997 9999999988764211 1 22334478899999999998644211 1 11 121
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCc-eEEEecCCcchHHHHHH
Q 039838 127 TNQQESIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDI-KNFNLSGMGCSASALAI 205 (466)
Q Consensus 127 ~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~-~~~dl~~mgCs~~l~aL 205 (466)
..++.+.+++.+|+.+|+++||+++|++++|||+||++++.....|+++.+|+++||+++.+ +++|++. ||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~-gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQ-GCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhcC-hhHHHHHHH
Confidence 12566889999999999999999999999999999987544445999999999999999665 4788885 999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccccCCCCCCCC--cccccccccccccceeEEEeecCCCc-ccCcceEeeEEeeeecCCc
Q 039838 206 DMAQALLKTQKDSDALVLSTEILSTGWYSGNE--KPKLLLNCLFRMGSVAVLLTNKKQAK-RSSKYKVVRTVRTNKAFDD 282 (466)
Q Consensus 206 ~lA~~ll~~~~~~~aLVVs~E~~s~~~~~~~d--r~~l~~~~lfgDGAaA~lLs~~~~~~-~~~~~~L~~~~~t~~~~d~ 282 (466)
++|++++++++.++||||++|.+|..++.+.+ .+..+.+++|||||+|+||+++++.. .++.|++...... ...+.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~-~~p~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQT-ILPDS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccce-EecCC
Confidence 99999999999999999999999987743332 23456678999999999999865431 1234555443211 11112
Q ss_pred cccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEE
Q 039838 283 KAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHF 362 (466)
Q Consensus 283 ~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~ 362 (466)
+.+..... .+.| ..+.+++++|....+.+. .+.+++|+ +++ +. ..|+++|
T Consensus 255 ~~~~~~~i--~~~G-~~~~l~~~vp~~~~~~i~----------------------~~v~~~L~-~~g-l~---~~di~~~ 304 (401)
T PLN03170 255 EGAIDGHL--REVG-LTFHLLKDVPGLISKNIE----------------------RSLEEAFK-PLG-IT---DYNSIFW 304 (401)
T ss_pred cccccceE--EcCC-eEEEEehHHHHHHHHHHH----------------------HHHHHHHH-hcC-CC---ccccCeE
Confidence 11111111 1122 234566777765433222 22345666 667 76 5889999
Q ss_pred EecCCCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHH----HcCCCCCC---CEEEEEeechhhhhc
Q 039838 363 CLPVSGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYME----AKERVKKG---DRVWLIGAGTGSKCG 435 (466)
Q Consensus 363 ~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~----~~g~i~~G---d~vllia~GsG~~~~ 435 (466)
++||+|+++++.+++.||++++++.+|+.++++||||||+|+++.|+++. ++|++++| |++++++||+||+|+
T Consensus 305 v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~ 384 (401)
T PLN03170 305 VAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVE 384 (401)
T ss_pred EecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHH
Confidence 99999999999999999999999988999999999999999999999987 46888888 899999999999999
Q ss_pred ceeEEEec
Q 039838 436 SVVLQCLR 443 (466)
Q Consensus 436 s~v~r~~~ 443 (466)
++++||..
T Consensus 385 ~~ll~~~~ 392 (401)
T PLN03170 385 TVVLHSVP 392 (401)
T ss_pred hHHheecc
Confidence 99999943
No 14
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=4.8e-49 Score=408.21 Aligned_cols=352 Identities=14% Similarity=0.204 Sum_probs=259.6
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccc---cCCChhhHHHHHHHHHHcCCCCeeecCCCc-c--------CCCC--
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLV---ETFDSESMAFMSKVLTCSGQSEETYLPPAL-Q--------YIPP-- 125 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~---~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~-~--------~~~~-- 125 (466)
.+++|+++|+|+|++. ++|+++.+++... ..+ ++..+.+++|.+++||++|+++.+++ . ..+|
T Consensus 21 ~~~~I~gigt~~P~~~--v~n~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~ 97 (399)
T PLN03171 21 GLAAVLAIGTANPANC--VPQDEFPDFYFRATKSDHL-TALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSL 97 (399)
T ss_pred CCcEEEEEEeeCCCcc--cCHHHHHHHHHHHhccccc-HHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCH
Confidence 5799999999999997 9999999975321 111 11233467899999999999876542 0 0111
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCce-EEEecCCcchHHHH
Q 039838 126 KTNQQESIKEAQMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIK-NFNLSGMGCSASAL 203 (466)
Q Consensus 126 ~~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~-~~dl~~mgCs~~l~ 203 (466)
...++.+.|.+.+|+.+|+++||+++|++|+|||+||++| ++++ .|+++.+|+++||+++.+. .+++.+ ||+|++.
T Consensus 98 ~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl~~~~~~~~~~~~-gC~g~~~ 175 (399)
T PLN03171 98 DARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGLRPSVRRTMLHLN-GCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCCCcccceeeccCC-ccHHHHH
Confidence 1125568889999999999999999999999999999975 5554 8999999999999986653 566665 9999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccccCCCCCCCCc---ccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecC
Q 039838 204 AIDMAQALLKTQKDSDALVLSTEILSTGWYSGNEK---PKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAF 280 (466)
Q Consensus 204 aL~lA~~ll~~~~~~~aLVVs~E~~s~~~~~~~dr---~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~ 280 (466)
||++|.+++++++.++||||++|.+|..+ ++.|+ .+++.+++|||||+|+||+++++..++..|++.+.....
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~--- 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAI--- 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEE---
Confidence 99999999999999999999999999876 33343 244567899999999999987653222446665433222
Q ss_pred CccccccCeeeccCCCCcceEec-chhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccc
Q 039838 281 DDKAYNSGMREEDSNGKLGVTLN-RDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAV 359 (466)
Q Consensus 281 d~~~~~~~~~~~d~~g~~g~~ls-~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~di 359 (466)
++...+.+.+.....| ....++ +.+|...++.++..+. ......+....+ +. .+|+
T Consensus 252 ~p~~~~~~~~~~~~~g-~~~~~~~~~vp~~i~~~l~~~l~------------------~~l~~~~~~~~g-~~---~~di 308 (399)
T PLN03171 252 IPESDDAINMHFTEGG-LDGNIGTRQVPGLIGDNIERCLL------------------DAFAPLLGGDGG-AE---WNDL 308 (399)
T ss_pred ecCCchheEEEEEcCC-ceEEECchhHHHHHHHHHHHHHH------------------HHHHhhcccccC-CC---cccc
Confidence 2222233322111122 222344 5566544333222211 000011110223 54 4788
Q ss_pred cEEEecCCCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCC--CCCC---CEEEEEeechhhhh
Q 039838 360 QHFCLPVSGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKER--VKKG---DRVWLIGAGTGSKC 434 (466)
Q Consensus 360 d~~~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~--i~~G---d~vllia~GsG~~~ 434 (466)
+++ +||+|+++++.+++.||++++++..|+.++++||||+|+|+|+.|+++.++++ +++| |++++++||+|++|
T Consensus 309 ~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Glt~ 387 (399)
T PLN03171 309 FWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGLTV 387 (399)
T ss_pred eEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccHHH
Confidence 766 69999999999999999999999988999999999999999999999988774 6788 99999999999999
Q ss_pred cceeEEEecC
Q 039838 435 GSVVLQCLRP 444 (466)
Q Consensus 435 ~s~v~r~~~~ 444 (466)
++++|++.++
T Consensus 388 ~~~ll~~~~~ 397 (399)
T PLN03171 388 DAMLLHASGH 397 (399)
T ss_pred HHHHhhcccC
Confidence 9999999764
No 15
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=5.9e-49 Score=401.87 Aligned_cols=332 Identities=15% Similarity=0.160 Sum_probs=253.6
Q ss_pred CCCceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHH
Q 039838 58 KPSVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQ 137 (466)
Q Consensus 58 ~~~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~ 137 (466)
+.++++|+++|.|+|++. ++++++.+... ..+ ....+|+.+++||.+|+++.+++ .+.
T Consensus 4 ~~~~~~I~~~g~~lP~~~--v~~~~~~~~~~-----~~~-~~~~~~i~~~~Gi~~R~~~~~~e--------------~~~ 61 (353)
T PRK12880 4 RFDKAKISGICVSVPEHK--ICIDDELESVF-----SND-IKTLKRMKKVIGLNTRYICDENT--------------CVS 61 (353)
T ss_pred cccccEEEEEEEECCCeE--ecHHHHHHHhc-----Ccc-hhhhhhhhhccCceEEEeCCCCC--------------CHH
Confidence 467899999999999997 99987554321 111 12246788999999999986532 245
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQK 216 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~ 216 (466)
+|+.+|+++||+++|++++|||+||+++ ++++..|+++.+|+++||+++++.+||+++ ||+|++.||++|++++++++
T Consensus 62 ~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~-~C~g~~~aL~~A~~~i~~~~ 140 (353)
T PRK12880 62 DLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQ-ACAGYLYGLFVAHSLIQSGL 140 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhh-hhHHHHHHHHHHHHHHHcCC
Confidence 6999999999999999999999999975 689999999999999999988899999986 99999999999999999999
Q ss_pred CCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCC
Q 039838 217 DSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNG 296 (466)
Q Consensus 217 ~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g 296 (466)
.+ ||||++|.+|..+ ++.|+.. ..+|||||+|+||+++++... .+ ...+++..++.+..+.++..
T Consensus 141 ~~-~LVv~~e~~S~~~-~~~d~~~---~~lFGDGAaA~vl~~~~~~~~--~~--------~~~~~~~~~~~~~~p~g~~~ 205 (353)
T PRK12880 141 GK-ILLICGDTLSKFI-HPKNMNL---APIFGDGVSATLIEKTDFNEA--FF--------ELGSDGKYFDKLIIPKGAMR 205 (353)
T ss_pred CC-EEEEEehhhhccC-CcccCCc---eeeecccceEEEEEecCCCCc--eE--------EEEecCCCCCeEEecCCCcC
Confidence 88 9999999999876 3455542 679999999999997654311 11 23455665665554432111
Q ss_pred CcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHH---HhhhhccCCCCCCCccccccEEEecCCCHHHHH
Q 039838 297 KLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIK---KGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIR 373 (466)
Q Consensus 297 ~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~---~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~ 373 (466)
..+.....+...+..+ .......+.+++.+.|+++++.++ +++|+ ++| +. .+|||+|++||+|+++++
T Consensus 206 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~-~~g-l~---~~did~~v~HQ~~~~i~~ 276 (353)
T PRK12880 206 IPKADIFNDDSLMQTE----EFRQLENLYMDGANIFNMALECEPKSFKEILE-FSK-VD---EKDIAFHLFHQSNAYLVD 276 (353)
T ss_pred CCcccccccccccccc----ccccCceEEEcCHHHHHHHHHHHHHHHHHHHH-HcC-CC---HHHCCEEEECCCCHHHHH
Confidence 1111000000000000 001111234556677877776555 56787 777 77 699999999999999999
Q ss_pred HHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEe
Q 039838 374 EIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCL 442 (466)
Q Consensus 374 ~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~ 442 (466)
.+.+.||+++|++. ..++++||||||+|+|+.|++..++|+++ +++++||+|++|+++++||.
T Consensus 277 ~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~ 339 (353)
T PRK12880 277 CIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFK 339 (353)
T ss_pred HHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEEC
Confidence 99999999999982 35789999999999999999999887764 99999999999999999993
No 16
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2e-48 Score=394.05 Aligned_cols=321 Identities=17% Similarity=0.251 Sum_probs=249.3
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHH
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMV 139 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 139 (466)
.+++|+++|+|+|++. ++++++.+..+. ++ +++.+++||++|++.++++ + +.+|
T Consensus 2 ~~~~I~~~g~~lP~~~--v~~~~~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~e-------~-------~~~l 55 (326)
T PRK05963 2 CSSRIAGFGHAVPDRR--VENAEIEAQLGL----ET------GWIERRTGIRCRRWAAPDE-------T-------LSDL 55 (326)
T ss_pred CccEEEEEEEECCCCe--ecHHHHHHHcCC----CH------HHhhhccCCeEEEEcCCCC-------C-------HHHH
Confidence 3689999999999996 999999987542 22 3578899999999976542 2 3469
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDS 218 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~ 218 (466)
+.+|+++||+++|++|+|||+||+++ ++++..|+.+.+|+++||++ ++.+||+++ ||+|++.||++|.++++++. +
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~~-~ 132 (326)
T PRK05963 56 AASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQG-K 132 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcCC-C
Confidence 99999999999999999999999975 67899999999999999997 689999998 99999999999999999874 8
Q ss_pred eEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCc
Q 039838 219 DALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKL 298 (466)
Q Consensus 219 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~ 298 (466)
+||||++|..+..+ +..++. +..+|||||+|+||++++... ..+ +.+...++++.|+.+..+.++..
T Consensus 133 ~aLVv~~d~~s~~~-~~~~~~---~~~lfGDgA~A~ll~~~~~~~----~~~---l~~~~~t~~~~~~~~~~~~gg~~-- 199 (326)
T PRK05963 133 PVLVVAANILSRRI-NMAERA---SAVLFADAAGAVVLAPSAKAN----SGV---LGSQLISDGSHYDLIKIPAGGSA-- 199 (326)
T ss_pred eEEEEEechhhccC-CccccC---ceEEEeecceEEEEEecCCCC----Cce---EEEEEEEcCCCCCeEEeCCCCcC--
Confidence 99999999988765 334443 368999999999999876432 122 23334555665554333322100
Q ss_pred ceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHH---HHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHH
Q 039838 299 GVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSV---IKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREI 375 (466)
Q Consensus 299 g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~---v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l 375 (466)
.+.+.+... + ..++. +.++.+.|.++... ..+++|+ +++ +. .+|||+|++||+|+++++.+
T Consensus 200 -~~~~~~~~~---~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~L~-~~g-l~---~~did~~~~h~~~~~~~~~~ 263 (326)
T PRK05963 200 -RPFAPERDA---S--EFLMT-----MQDGRAVFTEAVRMMSGASQNVLA-SAA-MT---PQDIDRFFPHQANARIVDKV 263 (326)
T ss_pred -CCCcccccc---c--ccceE-----ecCCHHHHHHHHHHHHHHHHHHHH-HcC-CC---HHHCCEEEeCCCCHHHHHHH
Confidence 000000000 0 00010 01122334444333 3346777 777 87 68999999999999999999
Q ss_pred HHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEE
Q 039838 376 AKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 376 ~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
.+.||+++|++ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 264 ~~~l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 264 CETIGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred HHHcCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 99999999998 6899999999999999999999999999999999999999999999999986
No 17
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.1e-48 Score=371.19 Aligned_cols=345 Identities=22% Similarity=0.326 Sum_probs=278.8
Q ss_pred eEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHH-HcCCCCeeecCCCccCCCCCCC----HHHHHHHH
Q 039838 62 TYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLT-CSGQSEETYLPPALQYIPPKTN----QQESIKEA 136 (466)
Q Consensus 62 v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~-~sGi~~r~~~~~~~~~~~~~~~----~~~~~~ea 136 (466)
.+|.++++++|++. ++|.|+.+.+.... + .+..+-+.|.+. ..+|.+|+.+.|-..+..+ .+ +.-+.|||
T Consensus 2 a~i~sv~t~~Ppy~--~~Qse~~d~f~~~~-~-~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~-~~f~ekN~ifie~a 76 (356)
T COG3424 2 AVIASVATALPPYR--YNQSEITDSFAELP-F-QEGREDIPRVLHANAQINRRHLVLPLDWYREP-HGFGEKNEIFIEEA 76 (356)
T ss_pred ceeeecccCCCccc--cchHHHHHHHHHhc-c-ccchHHHHHHHhhccccccceecccHhhccCC-CChhhhhhhHHHHH
Confidence 47999999999996 88888877666553 2 233555667777 6677777665554333322 23 45589999
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQK 216 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~ 216 (466)
..+.++|+++||+.+++.|+|||+|++.++++..+||+.++|+++||+++++..+.+.+|||+|+..|+..|+++++++|
T Consensus 77 ~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P 156 (356)
T COG3424 77 VPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAP 156 (356)
T ss_pred HHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCc
Confidence 99999999999999999999999999988888889999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEeccccCCCCCCCC-cccccccccccccceeEEEeecCCC--cccCcceEeeEEeeeecCCccccccCeeecc
Q 039838 217 DSDALVLSTEILSTGWYSGNE-KPKLLLNCLFRMGSVAVLLTNKKQA--KRSSKYKVVRTVRTNKAFDDKAYNSGMREED 293 (466)
Q Consensus 217 ~~~aLVVs~E~~s~~~~~~~d-r~~l~~~~lfgDGAaA~lLs~~~~~--~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d 293 (466)
..+|||||.|.||.++....+ ++.++...+||||+||++++.+... ...-++.+.+. +++...|.+ +.+-|.-+
T Consensus 157 ~~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s-~StL~~dse--~~Mgwdv~ 233 (356)
T COG3424 157 DANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDS-FSTLYPDSE--DIMGWDVG 233 (356)
T ss_pred cceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceeccc-ccccCCccc--cccceeec
Confidence 999999999999998755443 3578999999999999999986542 22234444332 222333332 22334444
Q ss_pred CCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHH
Q 039838 294 SNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIR 373 (466)
Q Consensus 294 ~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~ 373 (466)
++| ..+.+|+|+|.+....++.|.+ .+|+ ..+ +. .+||++|+.|+||++|++
T Consensus 234 d~G-~~~vlSrdlp~lIe~~l~~~V~----------------------~fL~-~~~-ls---~~dI~~w~~HPGG~KVid 285 (356)
T COG3424 234 DQG-LKVVLSRDLPNLIESYLAPNVT----------------------TFLA-THG-LS---IEDIEAWVVHPGGPKVID 285 (356)
T ss_pred CCc-EEEEEcCchhHHHHHHhhhhHH----------------------HHHH-HcC-Cc---hhhhceeeeCCCCchHHH
Confidence 444 4567899999886554444443 2344 455 66 799999999999999999
Q ss_pred HHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEec
Q 039838 374 EIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCLR 443 (466)
Q Consensus 374 ~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~~ 443 (466)
++.+.||+++|.++.||+.|++|||+||+|+++.|.+.++++ .++|.+.++.+||+||+...++++|.+
T Consensus 286 a~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 286 AYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 999999999999999999999999999999999999999986 799999999999999999999999975
No 18
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=1.4e-47 Score=395.82 Aligned_cols=328 Identities=16% Similarity=0.208 Sum_probs=248.4
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHH
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMV 139 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 139 (466)
++++|+++|.|+|++. ++|+++.+.+.. ++ ++|.+++||++|++..+++ + +.+|
T Consensus 46 ~~~~I~g~g~~lP~~~--v~n~el~~~~~~----~~------~~i~~~tGi~~R~~~~~~~-------~-------~~~L 99 (379)
T PLN02326 46 SGSKLVGCGSAVPKLL--ITNDDLSKLVDT----SD------EWIATRTGIRNRRVLSGDE-------T-------LTSL 99 (379)
T ss_pred CCcEEEEEEEECCCce--ecHHHHHHhcCC----ch------hheecccCcceEeecCCCC-------C-------HHHH
Confidence 4689999999999996 999999987542 22 3578999999999875432 2 4569
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDS 218 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~ 218 (466)
+.+|+++||+++|++++|||+||++++ ++. .++.+..|+++||++ ++.++|+++ ||+|++.||++|.+++++++.+
T Consensus 100 a~~Aa~~aL~~agi~~~dId~li~~s~~~~~-~~~~a~~v~~~LG~~-~~~~~dv~~-~Ca~~~~aL~~A~~~l~~g~~~ 176 (379)
T PLN02326 100 AVEAAKKALEMAGVDPEDVDLVLLCTSSPDD-LFGSAPQVQAALGCT-NALAFDLTA-ACSGFVLGLVTAARFIRGGGYK 176 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCc-cCcHHHHHHHHhCCC-CCceeeccc-cchHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999764 444 446789999999998 899999997 9999999999999999999999
Q ss_pred eEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCc
Q 039838 219 DALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKL 298 (466)
Q Consensus 219 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~ 298 (466)
++|||++|..+..+ +++|+.. ..+|||||+|+||++++.... .+. ..+..+++..++.+.....+....
T Consensus 177 ~vLVv~~e~~s~~~-~~~d~~~---~~lfGDGAaAvlL~~~~~~~~----~i~---~~~~~t~g~~~~~~~~~~~g~~~~ 245 (379)
T PLN02326 177 NVLVIGADALSRYV-DWTDRGT---CILFGDGAGAVVLQACDDDED----GLL---GFDMHSDGNGHKHLHATFKGEDDD 245 (379)
T ss_pred EEEEEEechhcCCC-CccccCc---eEEEcceeEEEEEEEcCCCCC----ceE---EEEEEEcCCCCCeEEecCCCCccc
Confidence 99999999998755 4455543 469999999999998764321 122 223344444443322111100000
Q ss_pred -ceEecchhhHHH-HHHHHHhHhhhcccccchhHHHHHHHHHHH---HhhhhccCCCCCCCccccccEEEecCCCHHHHH
Q 039838 299 -GVTLNRDLLQIA-GETLRANITILGFKILPFRELFWLGVSVIK---KGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIR 373 (466)
Q Consensus 299 -g~~ls~d~~~~~-~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~---~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~ 373 (466)
...-..+..... .+.-..++. +.+.+.|+++.+.++ +++|+ +++ +. .+|||+|++||+|+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~------~~g~~v~~~~~~~~~~~i~~~L~-~~g-l~---~~dId~~v~Hq~n~~~~~ 314 (379)
T PLN02326 246 SSGGNTNGVGDFPPKKASYSCIQ------MNGKEVFKFAVRCVPQVIESALQ-KAG-LT---AESIDWLLLHQANQRIID 314 (379)
T ss_pred ccccccccccccccccccccceE------ecCHHHHHHHHHHHHHHHHHHHH-HcC-CC---HHHCCEEEECCCCHHHHH
Confidence 000000000000 000001122 333466666666544 56777 777 77 689999999999999999
Q ss_pred HHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEE
Q 039838 374 EIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 374 ~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
.+++.||+++|++ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++|++++++|
T Consensus 315 ~~~~~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 315 AVAQRLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHHHHcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 9999999999998 5789999999999999999999999999999999999999999999999986
No 19
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=6.6e-47 Score=383.21 Aligned_cols=321 Identities=17% Similarity=0.224 Sum_probs=245.9
Q ss_pred ceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHHH
Q 039838 61 VTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMVL 140 (466)
Q Consensus 61 ~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 140 (466)
.|+|+++|.|+|++. |+|+|+.+.++. ++ .+|.+++||++|++.++++ + +.+|+
T Consensus 2 ~v~I~~~g~~lP~~~--v~~~e~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~-------~-------~~~la 55 (326)
T CHL00203 2 GVHILSTGSSVPNFS--VENQQFEDIIET----SD------HWISTRTGIKKRHLAPSST-------S-------LTKLA 55 (326)
T ss_pred ccEEEEEEEECCCeE--EcHHHHHHhcCC----Ch------hhEeeccCeEEEEeCCCCC-------C-------HHHHH
Confidence 589999999999997 999999987652 11 2577999999999876542 2 34699
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 039838 141 FPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSD 219 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~ 219 (466)
.+|++++|+++|++|+|||.||++| +++.. +..+..++++||++ ++.++|+++ ||++++.||++|.++++++..++
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~~-~Casg~~al~~A~~~i~sg~~~~ 132 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDITA-ACSGFILALVTATQFIQNGSYKN 132 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeecc-cchhHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999976 45443 34578899999998 789999997 99999999999999999999999
Q ss_pred EEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCcc
Q 039838 220 ALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLG 299 (466)
Q Consensus 220 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g 299 (466)
+|||++|..+..+ ++.++. +..+|||||+|+||++.+.. .+.+ ....+|++.+..+.....+.....
T Consensus 133 ~Lvv~~e~~s~~~-~~~~~~---~~~~fgDga~A~ll~~~~~~------~~~~---~~~~t~g~~~~~~~~~~~~~~~~~ 199 (326)
T CHL00203 133 ILVVGADTLSKWI-DWSDRK---TCILFGDGAGAAIIGASYEN------SILG---FKLCTDGKLNSHLQLMNKPVNNQS 199 (326)
T ss_pred EEEEEehhhhCcC-CcccCC---ceEEEcceeeEEEEEEcCCC------CeEE---EEEEEcCCCcceEEecCCCCCccc
Confidence 9999999999765 344543 36799999999999986542 1222 223455544433221110000000
Q ss_pred eEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHH---HHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHH
Q 039838 300 VTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSV---IKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIA 376 (466)
Q Consensus 300 ~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~---v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~ 376 (466)
+. ....|.- . ...+. +++.+.++++.+. +.+++|+ +.| ++ .+|||||++||+|+++++.++
T Consensus 200 ~~-~~~~~~~---~-~~~~~------~~g~~~~~~~~~~~~~~i~~~L~-~~g-~~---~~did~~~~hq~~~~~~~~~~ 263 (326)
T CHL00203 200 FG-TTKLPQG---Q-YQSIS------MNGKEVYKFAVFQVPAVIIKCLN-ALN-IS---IDEVDWFILHQANKRILEAIA 263 (326)
T ss_pred cc-ccccccC---C-cceEE------ECCHHHHHHHHHHHHHHHHHHHH-HcC-CC---HHHCCEEEECCCCHHHHHHHH
Confidence 00 0000100 0 01111 2233455554443 3456788 777 87 699999999999999999999
Q ss_pred HHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEe
Q 039838 377 KNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCL 442 (466)
Q Consensus 377 ~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~ 442 (466)
+.||+++|++ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++|+++++||.
T Consensus 264 ~~lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 264 NRLSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred HHhCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEeC
Confidence 9999999998 67999999999999999999999999999999999999999999999999983
No 20
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.2e-46 Score=378.58 Aligned_cols=318 Identities=18% Similarity=0.257 Sum_probs=249.9
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHH
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMV 139 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 139 (466)
++++|.++|+|+|++. ++++|+.+..+. ++ +++.+++||++|++.++++ + +.+|
T Consensus 3 ~~~~I~~ig~~~P~~~--v~~~e~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~~-------~-------~~~l 56 (325)
T PRK12879 3 SYARITGIGTYVPPRV--LTNDDLETFIDT----SD------EWIVQRTGIKERRIAHVEE-------Y-------TSDL 56 (325)
T ss_pred CCCEEEEEEEECCCcE--EcHHHHHHhcCC----CH------HHhhhccCceEEEECCCCC-------C-------HHHH
Confidence 5799999999999996 999999986542 22 2478899999999876542 2 4469
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDS 218 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~ 218 (466)
+.+|++++|+++|++++|||.||+++ ++++..|+.+.+|+++||++ ++.++++++ ||+|++.||++|.++|++++.+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~~-~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDINA-ACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEECc-cchHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999975 56888999999999999997 689999996 9999999999999999999999
Q ss_pred eEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCc
Q 039838 219 DALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKL 298 (466)
Q Consensus 219 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~ 298 (466)
+||||++|.++... ...++. ...+|||||+|+||++++... .+ ..+...++++.++.++.+.. +.
T Consensus 135 ~~Lvv~~e~~s~~~-~~~~~~---~~~~~GDgAaA~ll~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~--~~- 199 (325)
T PRK12879 135 KVLVIGAERLSKVT-DYTDRT---TCILFGDGAGAVVLEATENEP-----GF---IDYVLGTDGDGGDILYRTGL--GT- 199 (325)
T ss_pred EEEEEEehhhcCcC-CccccC---ceEEEeecceEEEEEecCCCC-----Ce---EEEEEEEcCCCCCeEEEcCC--CC-
Confidence 99999999988754 333444 247999999999999876532 22 23344555554444433221 10
Q ss_pred ceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHH---HHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHH
Q 039838 299 GVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSV---IKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREI 375 (466)
Q Consensus 299 g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~---v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l 375 (466)
....+ + +....++ .+++.+.++++.+. +.+++|+ +++ +. ++|||+|++||+|+++++.+
T Consensus 200 --~~~~~-~----~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~L~-~~g-~~---~~did~~~~h~~~~~~~~~~ 261 (325)
T PRK12879 200 --TMDRD-A----LSGDGYI------VQNGREVFKWAVRTMPKGARQVLE-KAG-LT---KDDIDWVIPHQANLRIIESL 261 (325)
T ss_pred --CCCcc-c----cccCccE------EEcCHHHHHHHHHHHHHHHHHHHH-HcC-CC---HHHCCEEEECCCCHHHHHHH
Confidence 00000 0 0000011 12223444444433 3467787 777 87 68999999999999999999
Q ss_pred HHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEE
Q 039838 376 AKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 376 ~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
++.||+++|++ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++++++++||
T Consensus 262 ~~~lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 262 CEKLGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred HHHcCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 99999999998 5589999999999999999999999999999999999999999999999998
No 21
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.4e-46 Score=377.47 Aligned_cols=322 Identities=17% Similarity=0.238 Sum_probs=245.2
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHH
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMV 139 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 139 (466)
+.++|.+++.|+|++. ++++++.+..+. ++ +++.+++||++|++.. ++ + +.+|
T Consensus 3 ~~~~I~~~g~~lP~~~--v~~~~~~~~~~~----~~------~~i~~~~Gi~~R~~~~-~~-------~-------~~~l 55 (329)
T PRK07204 3 RYISIKGIGTYLPKRK--VDSLELDKKLDL----PE------GWVLKKSGVKTRHFVD-GE-------T-------SSYM 55 (329)
T ss_pred CCcEEEEEEEeCCCce--ecHHHHHHhhCC----CH------hHhhhccCceEEeecC-CC-------C-------HHHH
Confidence 4689999999999996 999999886542 22 3578899999999876 21 2 3469
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCC-CceEEEecCCcchHHHHHHHHHHHHHhcCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKS-DIKNFNLSGMGCSASALAIDMAQALLKTQKD 217 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~-~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~ 217 (466)
+.+|++++|+++|++|+|||+||+++ ++++..|+++.+|+++||+++ +++++|+++ ||+|++.||++|.+++++++.
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~-~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINS-TCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccc-hhHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999975 577779999999999999985 479999997 999999999999999999999
Q ss_pred CeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCC
Q 039838 218 SDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGK 297 (466)
Q Consensus 218 ~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~ 297 (466)
++||||++|..+..+ +..++. +..+|||||+|+||++.+.. .++. .++..++++.++....+.. +
T Consensus 135 ~~~Lvv~~e~~s~~~-~~~~~~---~~~lfGDGAaA~ll~~~~~~-----~~il---~~~~~t~~~~~~~~~~~~~--~- 199 (329)
T PRK07204 135 KRVLIISSEISSVGL-NWGQNE---SCILFGDGAAAVVITKGDHS-----SRIL---ASHMETYSSGAHLSEIRGG--G- 199 (329)
T ss_pred CEEEEEEeccccCCC-CcccCc---ceEEEecccEEEEEEEcCCC-----CcEE---EEEEEEecCCCCceEEecC--C-
Confidence 999999999988754 333333 25799999999999986643 2333 2233333332221111110 0
Q ss_pred cceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHH---HHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHH
Q 039838 298 LGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVS---VIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIRE 374 (466)
Q Consensus 298 ~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~---~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~ 374 (466)
........... ......+ .+++.+.++++.. .+.+++|+ ++| +. .+|||+|++||+|+++++.
T Consensus 200 ~~~~~~~~~~~---~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~L~-~~g-l~---~~did~~~~H~~~~~~~~~ 265 (329)
T PRK07204 200 TMIHPREYSEE---RKEDFLF------DMNGRAIFKLSSKYLMKFIDKLLM-DAG-YT---LADIDLIVPHQASGPAMRL 265 (329)
T ss_pred cCCCCcccccc---cccCceE------EECCHHHHHHHHHHHHHHHHHHHH-HcC-CC---HHHCCEEEeCCCCHHHHHH
Confidence 00000000000 0000000 1122334444333 34467788 777 88 6999999999999999999
Q ss_pred HHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEE
Q 039838 375 IAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 375 l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
+++.|++++|++ ..++++||||+|+|++++|++++++|++++||+|++++||+|++|+++++|+
T Consensus 266 i~~~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 266 IRKKLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HHHHcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 999999999997 6899999999999999999999999999999999999999999999999985
No 22
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=5.9e-46 Score=377.74 Aligned_cols=321 Identities=19% Similarity=0.217 Sum_probs=246.2
Q ss_pred CCCceEEEEeeeecCCCCCCCChHHHHHhhcccc-CCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHH
Q 039838 58 KPSVTYLVDFSCYKPPCFCRVPFSSFLENSSLVE-TFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEA 136 (466)
Q Consensus 58 ~~~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea 136 (466)
+.++++|.++|.|+|++. ++|+++.+.+.... ..... .+++.+++||++|++.+++ .+ .
T Consensus 2 ~~~~v~I~~~g~~lP~~~--v~~~~~~~~~~~~~~~~~~~----~~~i~~~~Gi~~R~~~~~~-------~~-------~ 61 (338)
T PRK09258 2 KYSNVAILSLAYELAPVV--VTSSEIEERLAPLYERLRLP----PGQLEALTGIRERRWWPEG-------TQ-------L 61 (338)
T ss_pred cccceEEEEEEecCCCcc--CcHHHHHHHhhhcccccCCC----hhHhhhhcCceeEecCCCC-------CC-------H
Confidence 456899999999999997 99999998754321 01111 1347778999999987543 23 3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+.+|+++||+++|++++|||.||+++ ++++..|+++.+|+++||+++++.++|+++ ||+|++.||++|.++++++
T Consensus 62 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~~g 140 (338)
T PRK09258 62 SDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIELG 140 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHHcC
Confidence 45999999999999999999999999975 578889999999999999986799999997 9999999999999999999
Q ss_pred CCCeEEEEEeccccCCCCCC-----CCcc------cccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccc
Q 039838 216 KDSDALVLSTEILSTGWYSG-----NEKP------KLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKA 284 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~~~~~~-----~dr~------~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~ 284 (466)
+.++||||++|..+..++.. .+.. ..+...+|||||+|+||++++... ..+++.. ....+++..
T Consensus 141 ~~~~~Lvv~~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~---~~~~~~~~~ 215 (338)
T PRK09258 141 QIDYALVVSGESAREIVEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLG---GVTRAATEH 215 (338)
T ss_pred CCCEEEEEEecccchhccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeee---eeeecCCCc
Confidence 99999999999988754211 0111 112357899999999999865422 1234433 222333332
Q ss_pred cccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHH---HHHHhhhhccCCCCCCCccccccE
Q 039838 285 YNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVS---VIKKGFIKNSCDVYVPNFKAAVQH 361 (466)
Q Consensus 285 ~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~---~v~~~~l~~~~~~~~pd~~~did~ 361 (466)
++ .... + ...+..+.+. .++.... .+.+++|+ +.+ ++ .+|||+
T Consensus 216 ~~-~~~~----~--~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~L~-~~g-~~---~~did~ 261 (338)
T PRK09258 216 HE-LCQG----G--RDGMRTDAVG----------------------LLKEGVELAVDTWEAFLA-QLG-WA---VEQVDR 261 (338)
T ss_pred cc-cccc----C--ccceEEcHHH----------------------HHHHHHHHHHHHHHHHHH-HcC-CC---HHHCCE
Confidence 22 1110 0 0111122221 2222222 23456777 677 77 589999
Q ss_pred EEecCCCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEE
Q 039838 362 FCLPVSGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 362 ~~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
|++||+|+++++.+++.||++++++ +.++++||||+|+|+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 262 ~i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 262 VICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred EecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 9999999999999999999999998 6788999999999999999999999999999999999999999999999986
No 23
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=2e-45 Score=374.19 Aligned_cols=330 Identities=15% Similarity=0.178 Sum_probs=245.1
Q ss_pred CCceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHH
Q 039838 59 PSVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQM 138 (466)
Q Consensus 59 ~~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~ 138 (466)
|++|+|.+++.|+|++. ++++++.+..+. ++ +++.+++|+.+|++.++++ + +.+
T Consensus 2 ~~~v~I~~~~~~lP~~~--v~~~~l~~~~g~----~~------~~~~~~~Gi~~r~~~~~~~-------~-------~~~ 55 (339)
T PRK06840 2 EMNVGIVGTGVYLPKDV--MTAEEIAEKTGI----PE------EVVIEKFGIYEKPVPGPED-------H-------TSD 55 (339)
T ss_pred CCceEEEEEEEeCCCcc--cCHHHHHHHhCC----CH------HHHhhhcCcceEeeCCCCC-------C-------HHH
Confidence 57899999999999996 999999886542 22 3467889999999876532 2 345
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEee--cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc-C
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINC--SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT-Q 215 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~--s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~-~ 215 (466)
|+.+|++++|+++|++|+|||+||+++ .+++..|+.+.+|++++|++ +++++|+++ ||++++.||++|.+++++ +
T Consensus 56 la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~~-~C~~~~~al~~A~~~l~~~g 133 (339)
T PRK06840 56 MAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIMA-VCASFPIALKVAKDLLYSDP 133 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Ccccccccc-cchHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999754 35778999999999999997 789999997 999999999999999999 6
Q ss_pred CCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCC
Q 039838 216 KDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSN 295 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~ 295 (466)
..+++|||++|..+..++. .++.... ...|||||+|+||++++.. .++. .+...++++.++.+..+.++.
T Consensus 134 ~~~~~Lvv~~~~~s~~~~~-~~~~~~~-~~~~GDgAaA~ll~~~~~~-----~~il---~~~~~t~~~~~~~~~~~~~g~ 203 (339)
T PRK06840 134 SIENVLLVGGYRNSDLVDY-DNPRTRF-MFNFAAGGSAALLKKDAGK-----NRIL---GSAIITDGSFSEDVRVPAGGT 203 (339)
T ss_pred CccEEEEEeecccccccCc-CCCCeee-eccCCCceeEEEEEecCCC-----CceE---EEEEEEcCCccceEEecCCCc
Confidence 6889999999998875532 2332100 1248999999999986543 2333 334455665554433222111
Q ss_pred CCcceEecchhhHHHHHHHHHhHhhhcccccc--hhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHH
Q 039838 296 GKLGVTLNRDLLQIAGETLRANITILGFKILP--FRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIR 373 (466)
Q Consensus 296 g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~--~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~ 373 (466)
..+.+.+... ..+.++...++..+. ..+.....+..+.+++|+ ++| +. .+|||+|++||+|+++++
T Consensus 204 ---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~-~~g-l~---~~did~~~~h~~~~~~~~ 271 (339)
T PRK06840 204 ---KQPASPETVE----NRQHYLDVIDPESMKERLDEVSIPNFLKVIREALR-KSG-YT---PKDIDYLAILHMKRSAHI 271 (339)
T ss_pred ---CCCCcccccc----cccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHH-HcC-CC---HHHCCEEEECCcCHHHHH
Confidence 1111111000 000001111111000 000001112345567788 778 87 689999999999999999
Q ss_pred HHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEe
Q 039838 374 EIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCL 442 (466)
Q Consensus 374 ~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~ 442 (466)
.+++.||++++++ . ++++||||+|+|++++|++++++|++++||++++++||+|++|+++++||.
T Consensus 272 ~~~~~Lgl~~~~~---~-~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 272 ALLEGLGLTEEQA---I-YLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred HHHHHcCCCHHHe---E-eHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 9999999999997 2 689999999999999999999999999999999999999999999999994
No 24
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=9.9e-45 Score=365.27 Aligned_cols=316 Identities=20% Similarity=0.289 Sum_probs=245.8
Q ss_pred ceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHHH
Q 039838 61 VTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMVL 140 (466)
Q Consensus 61 ~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 140 (466)
+++|.++++|+|++. ++++++.+..+. ++ +++.+++|+++|++.++++ + +.+|+
T Consensus 1 ~~~I~~i~~~lP~~~--~~~~~~~~~~~~----~~------~~~~~~~Gi~~r~~~~~~~-------~-------~~~la 54 (320)
T cd00830 1 NARILGIGSYLPERV--VTNDELEKRLDT----SD------EWIRTRTGIRERRIADPGE-------T-------TSDLA 54 (320)
T ss_pred CCEEEEEEEECCCcE--EcHHHHHHHcCC----CH------HHhhhccCceEEeeCCCCC-------C-------HHHHH
Confidence 579999999999996 999999987632 21 3578899999999987642 2 44699
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 039838 141 FPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSD 219 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~ 219 (466)
.+|++++|+++|++++|||.||+++ ++++..|+.+.+|++++|++ +++++++++ ||++++.||++|.+++++++.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~~-~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDINA-ACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeeccc-cchHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999965 56777899999999999997 799999996 99999999999999999999999
Q ss_pred EEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCcc
Q 039838 220 ALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLG 299 (466)
Q Consensus 220 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g 299 (466)
+|||++|.++..+ ...++. ...+|||||+|+||++.+.. .++.+ ++..++++.++.+..+..+..
T Consensus 133 vLvv~~e~~s~~~-~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~i~~---~~~~~~~~~~~~~~~~~~~~~--- 197 (320)
T cd00830 133 VLVVGAETLSRIL-DWTDRS---TAVLFGDGAGAVVLEATEED-----PGILD---SVLGSDGSGADLLTIPAGGSR--- 197 (320)
T ss_pred EEEEEehhhcccc-CcccCC---ceEEEeccceEEEEEecCCC-----CcEEE---EEEEEcCCCCCeEEeCCCCcC---
Confidence 9999999998754 223333 36899999999999987652 23333 344455555554443321110
Q ss_pred eEecchhhHHHHHHHHHhHhhhcccccchhHHHHH---HHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHH
Q 039838 300 VTLNRDLLQIAGETLRANITILGFKILPFRELFWL---GVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIA 376 (466)
Q Consensus 300 ~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~---~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~ 376 (466)
.+. +.. .....++...+ .+.+.. .+..+.+++|+ +++ +. ++|||+|++||+|+++++.++
T Consensus 198 ~~~--~~~----~~~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~-~~g-~~---~~di~~~~~h~~~~~~~~~~~ 260 (320)
T cd00830 198 SPF--EDA----EGGDPYLVMDG------REVFKFAVRLMPESIEEALE-KAG-LT---PDDIDWFVPHQANLRIIEAVA 260 (320)
T ss_pred Ccc--ccc----cccCccEEEcC------hHHHHHHHHhhHHHHHHHHH-HcC-CC---HHHCCEEEECCCCHHHHHHHH
Confidence 000 000 00000111111 122222 22344567787 777 77 689999999999999999999
Q ss_pred HHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeE
Q 039838 377 KNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVL 439 (466)
Q Consensus 377 ~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~ 439 (466)
+.||+++|++ ..++++|||++|+|++++|++++++|++++||+|+++++|+|++|+++++
T Consensus 261 ~~lgl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 261 KRLGLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred HHhCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 9999999998 67999999999999999999999999999999999999999999999874
No 25
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=3.8e-44 Score=361.34 Aligned_cols=313 Identities=20% Similarity=0.286 Sum_probs=245.6
Q ss_pred ceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHHH
Q 039838 61 VTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMVL 140 (466)
Q Consensus 61 ~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 140 (466)
.++|.++++|+|++. ++++++.+..+. ++ .++.+++|+++|++..+++ + +.+|+
T Consensus 2 ~~~I~~i~~~~P~~~--~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~-------~-------~~~la 55 (318)
T TIGR00747 2 YAGILGTGSYLPEKV--LTNADLEKMVDT----SD------EWIVTRTGIKERRIAADDE-------T-------SSTMG 55 (318)
T ss_pred CCEEEEEEEECCCce--ecHHHHHHhcCC----ch------HHeecccCceEEEECCCCC-------C-------HHHHH
Confidence 589999999999996 999999987553 11 2477889999998865532 2 34699
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 039838 141 FPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSD 219 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~ 219 (466)
..|++++|+++|++|+|||.||+++ ++++..|+.+.++++++|++ +++++++++ ||++++.||++|.++++++..++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~~-~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLSA-ACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehhh-hhHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999975 56778899999999999998 689999986 99999999999999999999999
Q ss_pred EEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCcc
Q 039838 220 ALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLG 299 (466)
Q Consensus 220 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g 299 (466)
+|||++|..+..+ ++.++.. ..+|||||+|+||++++... ++ .+++..++++.++....+.++...
T Consensus 134 ~Lvv~~e~~~~~~-~~~~~~~---~~~~GDGAaA~lL~~~~~~~-----~i---~~~~~~~~~~~~~~~~~~~~~~~~-- 199 (318)
T TIGR00747 134 VLVVGAEKLSSTL-DWTDRGT---CVLFGDGAGAVVLGESEDPG-----GI---ISTHLGADGTQGEALYLPAGGRPT-- 199 (318)
T ss_pred EEEEEehhhcCcC-CcCCCCe---EEEEecceeEEEEeecCCCC-----cE---EEEEEEEcCCCcceEEECCCCcCC--
Confidence 9999999988654 3344442 46899999999999877542 22 334445555555544333221100
Q ss_pred eEecchhhHHHHHHHHHhHhhhcccccchhHHHHHH---HHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHH
Q 039838 300 VTLNRDLLQIAGETLRANITILGFKILPFRELFWLG---VSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIA 376 (466)
Q Consensus 300 ~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~---~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~ 376 (466)
... ..++...++ +.++.. +..+.+++++ +++ +. .+|||+|++||+++++++.++
T Consensus 200 --~~~----------~~~~~~~~~------~~~~~~~~~~~~~~~~~l~-~~g-~~---~~di~~~~~h~~~~~~~~~~~ 256 (318)
T TIGR00747 200 --SGP----------SPFITMEGN------EVFKHAVRKMGDVVEETLE-ANG-LD---PEDIDWFVPHQANLRIIEALA 256 (318)
T ss_pred --CCC----------CCceEECCH------HHHHHHHHHHHHHHHHHHH-HcC-CC---HHHCCEEEECCCCHHHHHHHH
Confidence 000 000111111 122222 2233456777 677 77 589999999999999999999
Q ss_pred HHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEE
Q 039838 377 KNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 377 ~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
+.||++++++ ..++++||||+|+|++++|+++.++|++++||+|+++++|+|++|+++++||
T Consensus 257 ~~lgi~~~k~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 257 KRLELDMSQV---VKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred HHcCCCHHHe---eehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 9999999998 5789999999999999999999999999999999999999999999999997
No 26
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.5e-43 Score=363.90 Aligned_cols=346 Identities=17% Similarity=0.158 Sum_probs=245.3
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHH
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMV 139 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 139 (466)
++|+|.++|+|+|++. |+|+++.++++......+ ...++|++++||++|++..+.. ..++.+ ..+|
T Consensus 1 ~~v~I~gig~~lP~~~--v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~--~~~~~~-------~~~L 66 (378)
T PRK06816 1 MNVYITSTGAFLPGEP--VSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPE--GRPTHS-------NAQM 66 (378)
T ss_pred CCeEEEeeeecCCCCc--cCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCC--CCCCCC-------HHHH
Confidence 3689999999999997 999999987765421111 1235799999999999875421 112223 3469
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDS 218 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~ 218 (466)
+.+|+++||+++|++|+|||+||+++ ++++..|+.+..|+++||++ ++.++++++ +|+|++.||++|.+++++++.+
T Consensus 67 a~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~~-~Cas~~~al~~A~~~i~sg~~~ 144 (378)
T PRK06816 67 AAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSAG-VCAAGMMALKYAYLSVKAGESR 144 (378)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeecC-cCHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999976 57788999999999999998 689999986 9999999999999999999999
Q ss_pred eEEEEEeccccCCCCCCC--C---------c--cc----ccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCC
Q 039838 219 DALVLSTEILSTGWYSGN--E---------K--PK----LLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFD 281 (466)
Q Consensus 219 ~aLVVs~E~~s~~~~~~~--d---------r--~~----l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d 281 (466)
+||||++|..|..+.... + + .. -..+++|||||+|+||++.+... +..+ ++......++
T Consensus 145 ~vLvv~~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~~ 220 (378)
T PRK06816 145 NAVATASELASRWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRSY 220 (378)
T ss_pred EEEEEeEccchhhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeecc
Confidence 999999999987653110 0 1 00 01135799999999999866531 2211 1111111222
Q ss_pred ccccc-cCeeeccC--CC-CcceE-ecchhhHHHHHHHHHhHhhhcccccchhHHHHHH---HHHHHHhhhhccCCCCCC
Q 039838 282 DKAYN-SGMREEDS--NG-KLGVT-LNRDLLQIAGETLRANITILGFKILPFRELFWLG---VSVIKKGFIKNSCDVYVP 353 (466)
Q Consensus 282 ~~~~~-~~~~~~d~--~g-~~g~~-ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~---~~~v~~~~l~~~~~~~~p 353 (466)
...+. |+....+. .+ ..+.. ...+.+...+ +..+.+.+ ...+.++ ...+.+++|+ +.| ++
T Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~~~~~~i~~~L~-~~g-l~- 288 (378)
T PRK06816 221 AGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAAS---ALSLKQDV------RLLNENIVVYTIKPLLELVD-KRN-LD- 288 (378)
T ss_pred cccCccceecCCccCCCCCccCcccCCHHHHHhcc---CchHHhHH------HHHHHHhHHHHHHHHHHHHH-HcC-CC-
Confidence 22221 21111000 00 00000 0000000000 01111111 2222222 2334567788 777 88
Q ss_pred CccccccEEEecCCCHHHHHHHHHHc-----CCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEee
Q 039838 354 NFKAAVQHFCLPVSGRPVIREIAKNL-----KLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGA 428 (466)
Q Consensus 354 d~~~did~~~~H~~~~~vl~~l~~~L-----gl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~ 428 (466)
.+|||+|++||+|.++++.+.+.| |++++|+ +.++++||||+|||+|++|++++++|++++||+|++++.
T Consensus 289 --~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~ 363 (378)
T PRK06816 289 --PDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVP 363 (378)
T ss_pred --hhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEe
Confidence 699999999999999999999987 8999998 689999999999999999999999999999999999988
Q ss_pred chh-hhhcceeEEEe
Q 039838 429 GTG-SKCGSVVLQCL 442 (466)
Q Consensus 429 GsG-~~~~s~v~r~~ 442 (466)
|+| +.++.+++.|+
T Consensus 364 ~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 364 ESGRFSTAFMLLTVV 378 (378)
T ss_pred cccchhheeEEEEEC
Confidence 776 99999999874
No 27
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-43 Score=360.20 Aligned_cols=311 Identities=16% Similarity=0.218 Sum_probs=237.8
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHH
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMV 139 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 139 (466)
++|+|.++|.|+|++. ++++++.+..+. ++ +++.+++||.+|++.+++ .+ +.+|
T Consensus 1 ~~v~I~~~g~ylP~~~--v~~~el~~~~~~----~~------~~i~~~~Gi~~R~~~~~~-------~~-------~~~l 54 (347)
T PRK04262 1 MMVGIVGYGAYIPRYR--IKVEEIARVWGD----DP------EAIKRGLGVEEKSVPGPD-------ED-------TATI 54 (347)
T ss_pred CceeEEEEEEeCCCEE--ecHHHHHHHhCc----CH------HHHhhccCeeeeecCCCC-------cC-------HHHH
Confidence 4689999999999996 999999987642 22 368889999999987653 23 3469
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDS 218 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~ 218 (466)
+.+|+++||+++|++++|||.||+++ ++++..|+.+.+|+++||+++++.++|+++ ||+|++.||++|.+++++++.+
T Consensus 55 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~-~C~~~~~aL~~A~~~i~sg~~~ 133 (347)
T PRK04262 55 AVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLEF-ACKAGTAALQAAMGLVKSGMIK 133 (347)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999865 578888999999999999986789999987 9999999999999999999999
Q ss_pred eEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCC-CC
Q 039838 219 DALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSN-GK 297 (466)
Q Consensus 219 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~-g~ 297 (466)
+||||++|.... ...++. ...|||||+|+||++.+. ..++.+.. + ...|.. + .++..+.. ..
T Consensus 134 ~aLVv~~e~~~~---~~~~~~----~~~~GDGA~A~ll~~~~~-----~~~i~~~~-~-~~~d~~--d-~~~~~~~~~~~ 196 (347)
T PRK04262 134 YALAIGADTAQG---APGDAL----EYTAAAGGAAFIIGKEEV-----IAEIEATY-S-YTTDTP--D-FWRREGEPYPR 196 (347)
T ss_pred EEEEEEEeeecc---CCCCCC----CCcCCCCcEEEEEecCcc-----cceeeccc-c-ccccch--h-hcCCCCCcCCC
Confidence 999999998432 223332 246899999999997432 23333321 1 112221 1 12111000 00
Q ss_pred cceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHH
Q 039838 298 LGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAK 377 (466)
Q Consensus 298 ~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~ 377 (466)
.+..+..+ + ..++ .+..+.+++|+ +.+ +. .+|||+|++||+|+++++.+++
T Consensus 197 ~~~~~~~~-~----------------------~~~~-~~~~~i~~~L~-~~g-l~---~~dId~~v~Hq~n~~~~~~~~~ 247 (347)
T PRK04262 197 HGGRFTGE-P----------------------AYFK-HIISAAKGLME-KLG-LK---PSDYDYAVFHQPNGKFPLRVAK 247 (347)
T ss_pred cCceecch-H----------------------HHHH-HHHHHHHHHHH-HhC-cC---HHHhceeecCCCchHHHHHHHH
Confidence 00000000 0 1122 22334567777 777 77 6899999999999999999999
Q ss_pred HcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEecCCC
Q 039838 378 NLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCLRPIV 446 (466)
Q Consensus 378 ~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~~~~~ 446 (466)
.||++++++..+. ++++||||+|+|+|++|+++++ ++++||+|++++||+|+++.+++||+.+...
T Consensus 248 ~Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 248 MLGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred HcCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 9999999985333 5899999999999999999987 4899999999999999999999999987655
No 28
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.8e-42 Score=349.27 Aligned_cols=314 Identities=20% Similarity=0.293 Sum_probs=244.8
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHH
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMV 139 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 139 (466)
..|+|.++++|+|++. ++++++.+..+. ++ +++.+++|+++|++..++ .+ ..+|
T Consensus 2 ~~v~I~ai~~~lP~~~--~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~-------~~-------~~~l 55 (319)
T PRK09352 2 MYAKILGTGSYLPERV--VTNDDLEKMVDT----SD------EWIVTRTGIKERRIAAPD-------ET-------TSDL 55 (319)
T ss_pred CceEEEEEEEECCCeE--EcHHHHHHHcCC----CH------HHhhhhcCeEEEEeCCCC-------CC-------HHHH
Confidence 4689999999999996 999999987542 11 357789999999876543 22 3469
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDS 218 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~ 218 (466)
+.+|++++|+++|++++|||.||+++ +++...|+.+..|+.++|++ +++++++++ +|++++.||.+|.+++++|+.+
T Consensus 56 a~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~~-~Casg~~al~~A~~~i~~g~~~ 133 (319)
T PRK09352 56 ATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLSA-ACSGFVYALSTADQFIRSGAYK 133 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeeccc-cchhHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999875 46677899999999999995 789999996 9999999999999999999999
Q ss_pred eEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCc
Q 039838 219 DALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKL 298 (466)
Q Consensus 219 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~ 298 (466)
+|||+++|.++..+ ...++.. ..+|||||+|+||++++.. ++. ..+..++++.++.+..+.++..
T Consensus 134 ~vLvv~~e~~s~~~-~~~~~~~---~~~~gDGaaA~ll~~~~~~------~~~---~~~~~~~~~~~~~~~~~~~~~~-- 198 (319)
T PRK09352 134 NVLVIGAEKLSRIV-DWTDRST---CVLFGDGAGAVVLGASEEP------GIL---STHLGSDGSYGDLLYLPGGGSR-- 198 (319)
T ss_pred EEEEEEehhhcccc-CcccCCc---eEEEeccceEEEEEEcCCC------CeE---EEEEEEcCCCCCeEEeCCCCCC--
Confidence 99999999988654 3334432 5799999999999997653 122 2334445544443333321110
Q ss_pred ceEecchhhHHHHHHHHHhHhhhcccccchhHHHHH---HHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHH
Q 039838 299 GVTLNRDLLQIAGETLRANITILGFKILPFRELFWL---GVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREI 375 (466)
Q Consensus 299 g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~---~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l 375 (466)
.+.... ++...| .+.+++ .+..+.+++|+ +++ +. .+|||+|++|++|+++++.+
T Consensus 199 -~~~~~~-----------~~~~~~------~~~~~~~~~~~~~~i~~~l~-~~g-~~---~~di~~~~~h~~~~~~~~~~ 255 (319)
T PRK09352 199 -GPASPG-----------YLRMEG------REVFKFAVRELAKVAREALE-AAG-LT---PEDIDWLVPHQANLRIIDAT 255 (319)
T ss_pred -CCCCCC-----------ceEECC------HHHHHHHHHHHHHHHHHHHH-HcC-CC---HHHCCEEEECCCCHHHHHHH
Confidence 000000 011111 112222 23335567777 777 77 68999999999999999999
Q ss_pred HHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEe
Q 039838 376 AKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCL 442 (466)
Q Consensus 376 ~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~ 442 (466)
++.||+++|++ ..++++|||++++|++++|++++++|++++||++++++||+|++|+++++||.
T Consensus 256 ~~~lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 256 AKKLGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred HHHhCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEeC
Confidence 99999999998 67899999999999999999999999999999999999999999999999983
No 29
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=9.4e-43 Score=355.43 Aligned_cols=316 Identities=15% Similarity=0.167 Sum_probs=240.0
Q ss_pred ceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHHH
Q 039838 61 VTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMVL 140 (466)
Q Consensus 61 ~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 140 (466)
.++|.++|.|+|++. ++++++.+.... ++ +++.+++||++|++.++++ + +.+|+
T Consensus 1 ~~~I~g~g~~lP~~~--v~n~~l~~~~~~----~~------~~i~~~~Gi~~r~v~~~~~-------~-------~~~la 54 (345)
T TIGR00748 1 MAGIVGYGAYIPMYR--IKVEEIARVWGK----DP------ESISNGLPVEEKAVPGLDE-------D-------TATIG 54 (345)
T ss_pred CccEEEEEEeCCCee--ecHHHHHHHhCC----CH------hHeeeccceeeeecCCCCC-------C-------HHHHH
Confidence 368999999999996 999999886542 22 3577899999999886542 2 34599
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 039838 141 FPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSD 219 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~ 219 (466)
.+|+++||+++|++++|||.||+++ ++++..|+.+..+++++|+++++.++|+++ ||+|++.||++|.++++++..++
T Consensus 55 ~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~-aC~g~~~al~~A~~~i~sg~~~~ 133 (345)
T TIGR00748 55 VEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEF-ACKAGTAGIQACMGLVASGMIKY 133 (345)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999975 577888999999999999976789999997 99999999999999999999999
Q ss_pred EEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCcc
Q 039838 220 ALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLG 299 (466)
Q Consensus 220 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g 299 (466)
||||++|..+.. ..++. ...|||||+|+||++.+.. .++.+.. ...+|+.. .++.. +. .
T Consensus 134 vLVv~~d~~~~~---~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~~--~~~~d~~~---~~~~~---~~-~ 192 (345)
T TIGR00748 134 GLAIGADTAQGA---PGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGTY--SYTTDTPD---FWRRE---GE-P 192 (345)
T ss_pred EEEEEEeecccC---CCccC----cccCCCceEEEEEccCCcc-----eEeeccc--ceeccccc---ccccC---CC-c
Confidence 999999998642 23332 3578999999999965432 1221111 01122111 11110 00 0
Q ss_pred eEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHc
Q 039838 300 VTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNL 379 (466)
Q Consensus 300 ~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~L 379 (466)
+ +...+. ..+ ..+.++++.. +.+++|+ +++ +. .+|||+|++||+|+++++.+.+.|
T Consensus 193 ~------~~~~~~-------~~~-----~~~~~~~~~~-~~~~~L~-~~g-l~---~~did~~i~Hq~~~~~~~~~~~~l 248 (345)
T TIGR00748 193 Y------PRHGGR-------FTG-----EPAYFHHVVT-AAKGLME-KLG-LT---PEDFDYAVFHQPNGKFYLVAARML 248 (345)
T ss_pred C------CCcCCe-------ecC-----hHHHHHHHHH-HHHHHHH-HcC-CC---HHHcCEEEeCCCChHHHHHHHHHc
Confidence 0 000000 000 0134444443 4467787 777 87 689999999999999999999999
Q ss_pred CCChhhHHHHHHh--HhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEecCCCCCCCCCCCcc
Q 039838 380 KLGERDIEAALMT--LHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCLRPIVGESNKGPWAG 456 (466)
Q Consensus 380 gl~~e~~~~s~~~--l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~~~~~~~~~~~~w~~ 456 (466)
|++++++ ..+ .++||||+|+|+|+.|++.++ ++++||+|++++||+|++|++++|+|.+..... .||+-
T Consensus 249 gl~~ek~---~~~~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~~---~~~~~ 319 (345)
T TIGR00748 249 GFPKEQV---KPGLLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEEK---RDLAP 319 (345)
T ss_pred CCCHHHe---eccccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHHH---hhhhh
Confidence 9999998 343 489999999999999999986 689999999999999999999999998766533 46853
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.3e-41 Score=350.45 Aligned_cols=345 Identities=17% Similarity=0.208 Sum_probs=241.4
Q ss_pred ceEEEEeeeecCCCCCCCChHHHHHhhccc-cCCChhh---H----------HHHHHHHHHcCCCCeeecCCC----ccC
Q 039838 61 VTYLVDFSCYKPPCFCRVPFSSFLENSSLV-ETFDSES---M----------AFMSKVLTCSGQSEETYLPPA----LQY 122 (466)
Q Consensus 61 ~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~-~~~~~~~---~----------~f~~~i~~~sGi~~r~~~~~~----~~~ 122 (466)
+|+|+++|+|+|++. |+|+++.++++.. ..|+++. . ...++|.+++||++|++..+. ...
T Consensus 2 ~~~I~~~g~~lP~~~--v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~ 79 (372)
T PRK07515 2 NVVISGTGLYTPPES--ISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDR 79 (372)
T ss_pred CcEEEEEEeecCCcc--ccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccc
Confidence 589999999999997 9999999875321 0111000 0 013568889999999987531 101
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcch
Q 039838 123 IPPK--TNQQESIKEAQMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCS 199 (466)
Q Consensus 123 ~~~~--~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs 199 (466)
.++. .........+.+|+..|+++||+++|++++|||.||+++ ++++..|+.+.+|+++||++ ..++++++ +|+
T Consensus 80 ~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~~-aCa 156 (372)
T PRK07515 80 MRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMNV-ACS 156 (372)
T ss_pred cCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEecc-hhH
Confidence 1110 011111123567999999999999999999999999876 46788999999999999996 57899986 999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeec
Q 039838 200 ASALAIDMAQALLKTQKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKA 279 (466)
Q Consensus 200 ~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~ 279 (466)
+++.||.+|.++|+++..++||||++|..+..+ ...++. ...+|||||+|+||++.+....+.++++.... ..
T Consensus 157 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~d~~---~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~---~~ 229 (372)
T PRK07515 157 SATFGIQTAANAIRSGSARRVLVVNPEICSGHL-NFRDRD---SHFIFGDVATAVIVERADTATSAGGFEILGTR---LF 229 (372)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeecccccc-cccCCC---CCEEecCccEEEEEeeccccccCCCceEEEEE---ee
Confidence 999999999999999999999999999988754 334554 25899999999999987643222345554432 21
Q ss_pred CCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHH---HHhhhhccCCCCCCCcc
Q 039838 280 FDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVI---KKGFIKNSCDVYVPNFK 356 (466)
Q Consensus 280 ~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v---~~~~l~~~~~~~~pd~~ 356 (466)
++. .+.+ ..+. |. +.....+-+. ....++. +++.+.|+++...+ ++++|+ +++ +. .
T Consensus 230 ~~~--~~~~-~~~~--G~-~~~~~~~~~~----~~~~~~~------~~g~~~~~~~~~~~~~~i~~~L~-~~g-l~---~ 288 (372)
T PRK07515 230 TQF--SNNI-RNNF--GF-LNRADPEGIG----ARDKLFV------QEGRKVFKEVCPMVAEHIVEHLA-ENG-LT---P 288 (372)
T ss_pred ccc--ccce-ecCC--CC-CCCCCccccc----cccceEE------eccHHHHHHHHHHHHHHHHHHHH-HcC-CC---H
Confidence 211 1111 1110 10 0000000000 0000111 22234444444333 456787 777 87 5
Q ss_pred ccccEEEecCCCHHHHHHHHHH-cCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhc
Q 039838 357 AAVQHFCLPVSGRPVIREIAKN-LKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCG 435 (466)
Q Consensus 357 ~did~~~~H~~~~~vl~~l~~~-Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~ 435 (466)
+|||+|++||+|+++++.+.+. ||++.+. +.++.++++||||+|+|+|++|+++. +++++||+|++++||+|++|+
T Consensus 289 ~dId~~~~Hq~~~~~~d~~~~~llg~~~~~-~~~~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~ 365 (372)
T PRK07515 289 ADVKRFWLHQANINMNQLIGKKVLGRDATP-EEAPVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIG 365 (372)
T ss_pred HHCCEEEECCCCHHHHHHHHHHhccCCCCh-hhceEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHH
Confidence 9999999999999999999988 5654332 22378999999999999999999874 468999999999999999999
Q ss_pred ceeEEE
Q 039838 436 SVVLQC 441 (466)
Q Consensus 436 s~v~r~ 441 (466)
++++|.
T Consensus 366 ~~ll~~ 371 (372)
T PRK07515 366 SVIVRK 371 (372)
T ss_pred HHHhcc
Confidence 999873
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=8.1e-40 Score=330.10 Aligned_cols=321 Identities=18% Similarity=0.191 Sum_probs=237.8
Q ss_pred ceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHHH
Q 039838 61 VTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMVL 140 (466)
Q Consensus 61 ~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 140 (466)
.|+|.++++|+|++. ++++++.+..+.. ++..++|+++|++..++ .+ +.+|+
T Consensus 1 ~v~I~~i~~~lP~~~--v~~~~~~~~~~~~------------~~~~~~gi~~r~~~~~~-------~~-------~~~l~ 52 (324)
T cd00827 1 DVGIEAIGAYLPRYR--VDNEELAEGLGVD------------PGKYTTGIGQRHMAGDD-------ED-------VPTMA 52 (324)
T ss_pred CccEEEEEecCCcee--ecHHHHHHHhCCC------------cceeeeecceeEecCCC-------CC-------HHHHH
Confidence 478999999999996 9999998865421 46778999999987542 12 34599
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 039838 141 FPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSD 219 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~ 219 (466)
.+|++++|+++|++++|||.||+++ +++...|+.+.+|++++|++ ++.++++++ ||++++.||.+|.++++++..++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~~-~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLKQ-ACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehhh-hhHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999976 45566899999999999998 899999996 99999999999999999999999
Q ss_pred EEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCcc
Q 039838 220 ALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLG 299 (466)
Q Consensus 220 aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g 299 (466)
+|||++|..+.... ..++ ..++|||||+|+||++.+... .+++.. ++..+++..+.+.....+ +..
T Consensus 131 vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~~---~~~i~~---~~~~~~~~~~~~~~~~~~--~~~- 196 (324)
T cd00827 131 ALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGIL---AAGIVS---THSTSDPGYDFSPYPVMD--GGY- 196 (324)
T ss_pred EEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCcccc---cCCcee---eeeecccccccCccceec--cCC-
Confidence 99999999987552 1122 368999999999999876521 233333 334444443220000000 000
Q ss_pred eEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCH-HHHHHHHHH
Q 039838 300 VTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGR-PVIREIAKN 378 (466)
Q Consensus 300 ~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~-~vl~~l~~~ 378 (466)
.. +.. +.....+...+.. ....+.....+..+.+++|+ +.+ +. +|||+|++||+|+ .+++.+++.
T Consensus 197 ---~~--~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~-~~~-~~----~~i~~~~~h~~~~~~~~~~~~~~ 262 (324)
T cd00827 197 ---PK--PCK--LAYAIRLTAEPAG-RAVFEAAHKLIAKVVRKALD-RAG-LS----EDIDYFVPHQPNGKKILEAVAKK 262 (324)
T ss_pred ---Cc--chh--hhhhcceeecCCc-cchHHHHhHHHHHHHHHHHH-Hcc-cc----cccceeeccCchHHHHHHHHHHH
Confidence 00 000 0000000000000 00011222233344556676 555 43 6899999999999 999999999
Q ss_pred cCCChhhHHHHHH-hHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeE
Q 039838 379 LKLGERDIEAALM-TLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVL 439 (466)
Q Consensus 379 Lgl~~e~~~~s~~-~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~ 439 (466)
++++++++.+++. ++++||||+|+|+++.|+++++++++++||+|++++||+|++++++++
T Consensus 263 l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 263 LGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred ccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 9999999976554 899999999999999999999999999999999999999999998864
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=3.4e-37 Score=318.12 Aligned_cols=307 Identities=19% Similarity=0.243 Sum_probs=227.3
Q ss_pred eEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHHHH
Q 039838 62 TYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMVLF 141 (466)
Q Consensus 62 v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~ 141 (466)
|+|.+++.|+|+.. ++++++.+..+. ++ +++...+|+++|++.++++ ++.+|+.
T Consensus 1 iGI~~i~~y~P~~~--v~~~ela~~~g~----~~------~~~~~g~G~~~~~~~~~~e--------------d~~~la~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQNY--LDMTALAEARGV----DP------EKFHIGIGQKKMAVPPIDE--------------DIVTMAA 54 (379)
T ss_pred CCEeEEEEECCCEE--eeHHHHHHHhCC----CH------HHHHhhcCceEEeeCCCCC--------------CHHHHHH
Confidence 58999999999996 999999986542 32 3577889999988766532 2456999
Q ss_pred HHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeE
Q 039838 142 PVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDA 220 (466)
Q Consensus 142 ~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~a 220 (466)
+|++++|+++ +|+|||+||+++ |+++..|+.+..|+++||+++++.++|+.+ +|+|++.||.+|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~~-aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELKQ-ACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEecc-ccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999965 678888999999999999987899999997 999999999999999999999999
Q ss_pred EEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEE-eeeecCCccccccCeeeccCCCCcc
Q 039838 221 LVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTV-RTNKAFDDKAYNSGMREEDSNGKLG 299 (466)
Q Consensus 221 LVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~-~t~~~~d~~~~~~~~~~~d~~g~~g 299 (466)
|||++|+..... .+. ...+|||||+|+||++++. +..+. .+...+++ ..+++++.+.
T Consensus 132 LVv~~D~a~~~~---~~~----~~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~--~~df~~p~~~----- 189 (379)
T TIGR01835 132 LVIASDIAKYGL---ESP----GEPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDD--IMDFWRPNYS----- 189 (379)
T ss_pred EEEEeehhhccc---CCC----CCccccCccEEEEEecCCC--------eeEEeccceeeecC--CCCccCCCCC-----
Confidence 999999854321 111 1358999999999997542 11111 11112222 1223333210
Q ss_pred eEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHH----HHHH
Q 039838 300 VTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPV----IREI 375 (466)
Q Consensus 300 ~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~v----l~~l 375 (466)
..|.+.++... +.+...+....+++++ +.+ +. .+|||+||+||++.++ ++.+
T Consensus 190 -----~~~~v~g~~s~--------------~~y~~~~~~~~~~~l~-~~g-~~---~~did~~i~H~p~~~~~~k~~~~~ 245 (379)
T TIGR01835 190 -----TTALVDGQYSN--------------EQYLNAFENAWNDYAK-RTG-LS---LADFAAFCFHVPFTKMGLKALRHI 245 (379)
T ss_pred -----CceeECcHHHH--------------HHHHHHHHHHHHHHHH-HhC-CC---HHHcCEEEECCCCCcHHHHHHHHH
Confidence 11222222100 1122223344556677 667 77 6899999999997766 3446
Q ss_pred HHHcCCCh-h----hHHHHHHhHhhcCccccchHHHHHHHHHHcC-CCCCCCEEEEEeechhhhhcceeEEEec
Q 039838 376 AKNLKLGE-R----DIEAALMTLHRFGNQSSSSLWYELAYMEAKE-RVKKGDRVWLIGAGTGSKCGSVVLQCLR 443 (466)
Q Consensus 376 ~~~Lgl~~-e----~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g-~i~~Gd~vllia~GsG~~~~s~v~r~~~ 443 (466)
.+.++++. + .+++|+.+.+++|||+|+|+++.|+.+++++ ++++||+|++++||+|+.......+...
T Consensus 246 l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~ 319 (379)
T TIGR01835 246 LKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVA 319 (379)
T ss_pred HhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEcc
Confidence 66777773 3 3345677899999999999999999999886 7999999999999999887777776643
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=7.8e-35 Score=303.88 Aligned_cols=313 Identities=14% Similarity=0.195 Sum_probs=224.0
Q ss_pred CCCceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHH
Q 039838 58 KPSVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQ 137 (466)
Q Consensus 58 ~~~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~ 137 (466)
+|++|+|.++|.|+|+.. |+++++.++.+. +++ |+ ++||++|++.-.. ++ |++.
T Consensus 1 ~~~~vgI~gig~Y~P~~~--v~n~eLa~~~g~----~~~------~~--~~GI~~r~~ava~-----~~-------Ed~~ 54 (459)
T PLN02577 1 MPKNVGILAMEVYFPPTC--VQQEALEAHDGV----SKG------KY--TIGLGQDCMAFCT-----DV-------EDVI 54 (459)
T ss_pred CCCccEEEEEEEeCCCeE--EcHHHHHHHhCC----CHH------HH--hhccceeEeccCC-----CC-------CCHH
Confidence 478999999999999997 999999887553 222 33 5899999874211 11 2355
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHH---HHcCCCCCceEEEecCCcchHHHHHHHHHHHHHh
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIII---NKYSMKSDIKNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~---~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
+|+++|++++|+++|++|++||+||+++ |+++..|+.|..|+ ++||.+ ++.+||+++ +|+|++.||++|.++++
T Consensus 55 tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~~-AC~G~~~AL~~A~~~i~ 132 (459)
T PLN02577 55 SMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDSTN-ACYGGTAALLNCVNWVE 132 (459)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehhh-hhHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999976 78888999999886 688876 899999998 99999999999999999
Q ss_pred cCC--CCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeee
Q 039838 214 TQK--DSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMRE 291 (466)
Q Consensus 214 ~~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~ 291 (466)
++. .++||||++|+.+.... + .+ ..+||||+|+||+..+.. .+.. ...+.......++|++
T Consensus 133 sg~~~~~~aLVV~aD~a~~~~~-~-~e------~t~GdGA~A~lv~~~~~~------~l~~---~~~g~~~~~~~Df~rP 195 (459)
T PLN02577 133 SSSWDGRYGLVVAADSAVYAEG-P-AR------PTGGAGAVAMLVGPNAPI------VFES---KYRGSHMAHVYDFYKP 195 (459)
T ss_pred cCCCCCCeEEEEEechhhccCC-C-CC------CCCCcceEEEEEccCCCc------eeec---ccccccCcccchhccc
Confidence 986 59999999999775432 1 22 356999999999864421 1211 1112222223445555
Q ss_pred ccCCCCcceEecchhhHHHHHH-HHHhHhhhcccccchhHHHHHHHHHHHHhhhhccC------CCCCCCccccccEEEe
Q 039838 292 EDSNGKLGVTLNRDLLQIAGET-LRANITILGFKILPFRELFWLGVSVIKKGFIKNSC------DVYVPNFKAAVQHFCL 364 (466)
Q Consensus 292 ~d~~g~~g~~ls~d~~~~~~~~-~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~------~~~~pd~~~did~~~~ 364 (466)
... .+.|.+.|+. ++.+++ .+....+++++ +. + +. .+|||+||+
T Consensus 196 ~~~---------~~~~~vdG~~s~~~yl~---------------~~~~~~~~~~~-k~~~~~~~g-~~---~~d~d~~vf 246 (459)
T PLN02577 196 DLA---------SEYPVVDGKLSQTCYLM---------------ALDSCYKRFCE-KYEKLEGKQ-FS---ISDADYFVF 246 (459)
T ss_pred CCC---------CCceEEcchHHHHHHHH---------------HHHHHHHHHHH-HhhcccccC-CC---HHHcCEEEe
Confidence 321 0123333321 122222 11222233333 22 3 55 689999999
Q ss_pred cCCCHHHHHHHHHHcCCC----------------------------------------------hhhHHHHHHhHhhcCc
Q 039838 365 PVSGRPVIREIAKNLKLG----------------------------------------------ERDIEAALMTLHRFGN 398 (466)
Q Consensus 365 H~~~~~vl~~l~~~Lgl~----------------------------------------------~e~~~~s~~~l~~~GN 398 (466)
||+..++...-.+.|.+. .++++||...-++.||
T Consensus 247 HqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN 326 (459)
T PLN02577 247 HAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGN 326 (459)
T ss_pred cCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCc
Confidence 999766665544333211 1577777788899999
Q ss_pred cccchHHHHHHHHHHcCC-CCCCCEEEEEeechhhhhcceeEEEecC
Q 039838 399 QSSSSLWYELAYMEAKER-VKKGDRVWLIGAGTGSKCGSVVLQCLRP 444 (466)
Q Consensus 399 tssaSi~~~L~~~~~~g~-i~~Gd~vllia~GsG~~~~s~v~r~~~~ 444 (466)
+.++|+++.|..+++... ..+|+||.+.++|||........+....
T Consensus 327 ~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~~ 373 (459)
T PLN02577 327 MYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHEG 373 (459)
T ss_pred ccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeCC
Confidence 999999999999997642 4599999999999998888777776643
No 34
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=1e-33 Score=283.50 Aligned_cols=314 Identities=17% Similarity=0.245 Sum_probs=248.1
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHH
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMV 139 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 139 (466)
+.|+|.+++.|+|... |+.+|+.+..+. ++ .++.+-+|++++.+.|.+ |++.+|
T Consensus 1 ~~iGI~~~g~y~p~~~--i~~~ela~~~g~----d~------~k~~~gl~~~e~sv~~~~--------------ED~vTm 54 (377)
T COG3425 1 MMIGIVGIGAYIPRYR--IKLEELARAWGV----DP------EKIKKGLGVEEKSVPPWD--------------EDAVTM 54 (377)
T ss_pred CccccceEEEeccceE--eeHHHHHhhcCC----Ch------HHhhhccccccccCCCCc--------------hhHHHH
Confidence 4689999999999995 999999886442 22 367888999999876543 678999
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDS 218 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~ 218 (466)
+++||+++|++.++||++|++|++++ |..+...+.|..|++.||+.+++.++|+.. +|.++..||+.|.+++.+++.+
T Consensus 55 aveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~~ 133 (377)
T COG3425 55 AVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMIS 133 (377)
T ss_pred HHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999986 777889999999999999999999999998 9999999999999999999999
Q ss_pred eEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCc
Q 039838 219 DALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKL 298 (466)
Q Consensus 219 ~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~ 298 (466)
++|||++|+.-.. + .+.- -...|+||+|+|++..+... ..+.. +...+ ....++|++.+.
T Consensus 134 ~~LvI~sD~a~~~--~-~~~~----E~t~GAGavA~lIg~n~~~~----a~~~~---~~syt--~d~~DFwRp~~~---- 193 (377)
T COG3425 134 YGLVIGADTAQYA--P-GDAL----EYTAGAGAVAFLIGKNPPIV----AEFEG---TGSYT--TDTPDFWRPDGQ---- 193 (377)
T ss_pred ceEEEeehhhccC--C-Cccc----CccCCCceEEEEEccCCCeE----EEecC---ceEEe--cCCCcccccCCC----
Confidence 9999999986532 1 2211 35789999999999864321 11111 11111 223456666532
Q ss_pred ceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHH
Q 039838 299 GVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKN 378 (466)
Q Consensus 299 g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~ 378 (466)
..|.+.|+- + .+.+...+....+.+++ +.+ ++ .+|||++|+|+++.++-....+.
T Consensus 194 ------~yp~~dg~~-----s---------~~~Y~~~~~~a~~~~~~-k~g-ls---~~dfdy~vfH~P~~k~~~ka~k~ 248 (377)
T COG3425 194 ------PYPYVDGRF-----S---------EPAYFKHVENAAKGYME-KTG-LS---PDDFDYIVFHQPNGKFPKKAAKS 248 (377)
T ss_pred ------cccccCcee-----c---------HHHHHHHHHHHHHHHHH-HhC-CC---hhhhCeEEecCCCCchHHHHHHH
Confidence 123333221 0 12333344444556666 666 77 58999999999999999999999
Q ss_pred cCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEecCCC
Q 039838 379 LKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCLRPIV 446 (466)
Q Consensus 379 Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~~~~~ 446 (466)
++.+.+++.++....++.||++|+|+++.|..+++... .+||||++.+||+|........+....+.
T Consensus 249 l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~ 315 (377)
T COG3425 249 LGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIE 315 (377)
T ss_pred hCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHH
Confidence 99999999999999999999999999999999998765 79999999999999877777777766665
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=4.5e-32 Score=282.83 Aligned_cols=316 Identities=14% Similarity=0.187 Sum_probs=217.5
Q ss_pred ceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeee--cCCCccCCCCCCCHHHHHHHHHH
Q 039838 61 VTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETY--LPPALQYIPPKTNQQESIKEAQM 138 (466)
Q Consensus 61 ~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~--~~~~~~~~~~~~~~~~~~~ea~~ 138 (466)
+|+|.+++.|+|+.. |+++++.++.+. ++ .|+ .+||++|+. .+++ |.+.+
T Consensus 1 ~vgI~~ig~y~P~~~--v~~~eLa~~~g~----~~------~k~--~~GI~~rr~av~~~~--------------Ed~~t 52 (454)
T TIGR01833 1 DVGILALEIYFPSQY--VDQAELEKYDGV----SA------GKY--TIGLGQTKMGFCTDR--------------EDINS 52 (454)
T ss_pred CcEEEEEEEeCCCeE--EcHHHHHHhcCC----CH------HHh--eechhheecccCCCC--------------CCHHH
Confidence 589999999999996 999999886543 22 233 589999984 3332 23556
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHc---CCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKY---SMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~l---Gl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
|+..|++++|++++++|++||+||+++ |+++..|+.+.+|++.| |.+ ++.+||+.+ +|+|++.||.+|.+++++
T Consensus 53 ma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~~-AC~G~t~AL~~A~~~i~s 130 (454)
T TIGR01833 53 LCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTTN-ACYGGTAALFNAINWIES 130 (454)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEeccc-cchhHHHHHHHHHHHHHc
Confidence 999999999999999999999999975 78999999999999955 554 899999998 999999999999999998
Q ss_pred CC--CCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeec
Q 039838 215 QK--DSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREE 292 (466)
Q Consensus 215 ~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~ 292 (466)
+. .++||||++|+.-. .+.+. ..++||||+|+||++.+.- -++. .+..++.. ...++|++.
T Consensus 131 ~~~~~~~aLVV~sDia~y-----~~~~~---~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~----~~~DF~rP~ 193 (454)
T TIGR01833 131 SSWDGRYALVVAGDIAVY-----AKGNA---RPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQ----HAYDFYKPD 193 (454)
T ss_pred CCcCCCeEEEEEeccccc-----cCCCe---eeccccceEEEEeccCccc----eecC-ccceEEEe----ecccccCCC
Confidence 85 69999999999432 12221 3478999999999976641 0111 01111211 123345442
Q ss_pred cCCCCcceEecchhhHHHHH-HHHHhHhhhcccccchhHHHHHHHHHHH---HhhhhccCCCCCCCccccccEEEecCCC
Q 039838 293 DSNGKLGVTLNRDLLQIAGE-TLRANITILGFKILPFRELFWLGVSVIK---KGFIKNSCDVYVPNFKAAVQHFCLPVSG 368 (466)
Q Consensus 293 d~~g~~g~~ls~d~~~~~~~-~~~~~i~~~g~~vl~~~e~~~~~~~~v~---~~~l~~~~~~~~pd~~~did~~~~H~~~ 368 (466)
. ..+.|.++|. .+..|++.+. +.|......+. ++... +.+ .. .+|||++|+|++.
T Consensus 194 ~---------~~~~p~vdg~~S~~~Yl~a~~-------~~y~~y~~~~~~a~~~~~~-~~~-~~---~~dfd~~~fH~P~ 252 (454)
T TIGR01833 194 L---------ASEYPVVDGKLSIQCYLSALD-------RCYKSYCKKIEKQWGKSGG-DRK-FT---LNDFDYMVFHSPY 252 (454)
T ss_pred C---------CCcccccCCccCHHHHHHHHH-------HHHHHHHHHHHHhhhhhcc-ccC-CC---HhHcCEEeccCCc
Confidence 1 0112333332 1223333221 12222211111 11111 112 44 5899999999996
Q ss_pred HHHHHHH-HHHc---------------------------------------------CCChhhHHHHHHhHhhcCccccc
Q 039838 369 RPVIREI-AKNL---------------------------------------------KLGERDIEAALMTLHRFGNQSSS 402 (466)
Q Consensus 369 ~~vl~~l-~~~L---------------------------------------------gl~~e~~~~s~~~l~~~GNtssa 402 (466)
.++...- .+.+ +...++++||...-++.||+.++
T Consensus 253 ~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~Yta 332 (454)
T TIGR01833 253 CKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTA 332 (454)
T ss_pred ccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhh
Confidence 5555332 2222 11126777777777899999999
Q ss_pred hHHHHHHHHHHcCC--CCCCCEEEEEeechhhhhcceeEEEecC
Q 039838 403 SLWYELAYMEAKER--VKKGDRVWLIGAGTGSKCGSVVLQCLRP 444 (466)
Q Consensus 403 Si~~~L~~~~~~g~--i~~Gd~vllia~GsG~~~~s~v~r~~~~ 444 (466)
|+++.|..+++..+ ...|+||.|.++|||........+....
T Consensus 333 Slyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 333 SLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred HHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 99999999997643 4579999999999998888887777654
No 36
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.97 E-value=1.2e-31 Score=254.69 Aligned_cols=203 Identities=19% Similarity=0.286 Sum_probs=160.2
Q ss_pred hcCCCceEEEEeeeecCCCCCCCChHHHHHhhccccCCCh--hhHHHHHHHHHHcCCCCeeecCCCcc--C-----CCCC
Q 039838 56 LSKPSVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDS--ESMAFMSKVLTCSGQSEETYLPPALQ--Y-----IPPK 126 (466)
Q Consensus 56 ~~~~~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~--~~~~f~~~i~~~sGi~~r~~~~~~~~--~-----~~~~ 126 (466)
.+.+.+.+|.++|+..|++. ++++++.+.+.+....+. +..++++++++++||++|+..-+.+. . ....
T Consensus 9 ~~~~g~A~Il~IgTA~P~~~--~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPPHR--ITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp HS-SSSEEEEEEEEE-SSEE--EEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred ccCCCCeEEEEEEEeCCCce--ecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 45677899999999999996 999999987533221232 44678899999999999986533111 0 1112
Q ss_pred CC----HHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHH
Q 039838 127 TN----QQESIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASA 202 (466)
Q Consensus 127 ~~----~~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l 202 (466)
.+ ++.+.+++.+|+.+|++++|+++|++++|||+||+.+++....|++..+|+++|||++++..+.|.+|||+|++
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 22 56688999999999999999999999999999999877778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEeccccCCCCCCC--CcccccccccccccceeEEEeecC
Q 039838 203 LAIDMAQALLKTQKDSDALVLSTEILSTGWYSGN--EKPKLLLNCLFRMGSVAVLLTNKK 260 (466)
Q Consensus 203 ~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~~~~~--dr~~l~~~~lfgDGAaA~lLs~~~ 260 (466)
.||.+|+++.+++|..+||||+.|.+|.+++.++ ++++++.++||||||||+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 9999999999999999999999999998875433 357889999999999999998764
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.96 E-value=4.3e-29 Score=242.91 Aligned_cols=235 Identities=17% Similarity=0.225 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
..+|+.+|++++|+++|++++|||.||+++ ++++..|+.+.+|++++|++ +.+++++.+ ||++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~~-~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQ-ACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceecc-HhHHHHHHHHHHHHHHHC
Confidence 456999999999999999999999999976 46677899999999999997 799999996 999999999999999999
Q ss_pred CCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCccc---CcceEeeEEeeeecCCccccccCeee
Q 039838 215 QKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRS---SKYKVVRTVRTNKAFDDKAYNSGMRE 291 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~---~~~~L~~~~~t~~~~d~~~~~~~~~~ 291 (466)
+..+++||+++|. ++|||||+|+||++.+....+ ...++.+ .....++....
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~----- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVS---TAATFDGASMV----- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEE---EEEcCCCCCCC-----
Confidence 9999999999998 589999999999986542111 1122222 11111111000
Q ss_pred ccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHH
Q 039838 292 EDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPV 371 (466)
Q Consensus 292 ~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~v 371 (466)
. .... .......+++++ +++ +. .+|+|+|++|+.+..+
T Consensus 140 --------~-------~~~~----------------------~~~~~~i~~~l~-~ag-~~---~~did~~~~h~~~~~~ 177 (254)
T cd00327 140 --------P-------AVSG----------------------EGLARAARKALE-GAG-LT---PSDIDYVEAHGTGTPI 177 (254)
T ss_pred --------C-------CCCh----------------------HHHHHHHHHHHH-HcC-CC---HHHCCEEEccCCcCcc
Confidence 0 0000 011123345666 667 76 5899999999999999
Q ss_pred HHHHHHHcCCChhhHH--HHHHhHhhcCccccchHHHHHHHHHHcCCCC-------CCCEEEEEeechhhhhcceeE
Q 039838 372 IREIAKNLKLGERDIE--AALMTLHRFGNQSSSSLWYELAYMEAKERVK-------KGDRVWLIGAGTGSKCGSVVL 439 (466)
Q Consensus 372 l~~l~~~Lgl~~e~~~--~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~-------~Gd~vllia~GsG~~~~s~v~ 439 (466)
.+.+++.++++.++.. +...+..+|||++++|.++.|.+..+..+.+ +||++++.++|.|++++++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 178 GDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred ccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 9999999999887763 3467889999999999999999998876665 899999999999999998874
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.94 E-value=1.7e-26 Score=233.43 Aligned_cols=252 Identities=17% Similarity=0.142 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHHHHHcCCC----cCCcCEEEEeec-CCCC---------------------CCcHHHHHHHHcCCCCCce
Q 039838 136 AQMVLFPVIENLLSKVQIS----PQDIDILIINCS-GFCP---------------------SPSLSSIIINKYSMKSDIK 189 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~----~~dID~LI~~~s-~~~~---------------------~Ps~a~~I~~~lGl~~~~~ 189 (466)
..+|+..|++++|+++|++ ++|||.||++++ ..+. .|+.+.+|++.+|++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 3469999999999999999 999999998654 3333 788999999999994 78
Q ss_pred EEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCCCCCC----------C--Cc--ccccccccccccceeEE
Q 039838 190 NFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTGWYSG----------N--EK--PKLLLNCLFRMGSVAVL 255 (466)
Q Consensus 190 ~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~~~~----------~--dr--~~l~~~~lfgDGAaA~l 255 (466)
++++.+ ||++++.||++|.++|++++.+++||+++|..+..+... . .+ +.....++|||||+|+|
T Consensus 89 ~~~v~~-~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVSA-ACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred cccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 899996 999999999999999999999999999999876543110 0 00 11124789999999999
Q ss_pred EeecCCCcc---cCcceEeeEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHH
Q 039838 256 LTNKKQAKR---SSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELF 332 (466)
Q Consensus 256 Ls~~~~~~~---~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~ 332 (466)
|++.+.... +...++.. .....++.... ...+. .
T Consensus 168 L~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~-----------------~~~~~--~--------------------- 204 (332)
T cd00825 168 VEELEHALARGAHIYAEIVG---TAATIDGAGMG-----------------AFAPS--A--------------------- 204 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEE---EEEccCCCCCC-----------------CCCcC--H---------------------
Confidence 998654211 11122221 11111111000 00000 0
Q ss_pred HHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCChhhH--HHHHHhHhhcCccccchHHHHHHH
Q 039838 333 WLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGERDI--EAALMTLHRFGNQSSSSLWYELAY 410 (466)
Q Consensus 333 ~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~e~~--~~s~~~l~~~GNtssaSi~~~L~~ 410 (466)
..+....+++|+ +++ +. .+|||++++|+.|+.+.+.+++.++++.++. .+...+..+|||++++|.++.|..
T Consensus 205 -~~~~~~i~~al~-~ag-l~---~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~ 278 (332)
T cd00825 205 -EGLARAAKEALA-VAG-LT---VWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDE 278 (332)
T ss_pred -HHHHHHHHHHHH-HcC-CC---HhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHH
Confidence 011123455666 667 77 5899999999999999999999888776542 123578899999999999999999
Q ss_pred HHHcCCCC-------------------------CCCEEEEEeechhhhhcceeE
Q 039838 411 MEAKERVK-------------------------KGDRVWLIGAGTGSKCGSVVL 439 (466)
Q Consensus 411 ~~~~g~i~-------------------------~Gd~vllia~GsG~~~~s~v~ 439 (466)
+.+.++.+ +||+++++++|.|.+++++++
T Consensus 279 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 279 AVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 98866655 889999999999999998874
No 39
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.83 E-value=9.1e-21 Score=156.22 Aligned_cols=88 Identities=30% Similarity=0.449 Sum_probs=76.9
Q ss_pred cCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEE
Q 039838 347 SCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLI 426 (466)
Q Consensus 347 ~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vlli 426 (466)
++| +. .+|||+|++||.|+++++.+.+.+|+++|++ +.++++||||+|+|+|++|+++.++|++++||+|+++
T Consensus 3 ~~g-~~---~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~ 75 (90)
T PF08541_consen 3 RAG-LS---PDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLV 75 (90)
T ss_dssp HTT------GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEE
T ss_pred ccc-CC---HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEE
Confidence 456 77 6899999999999999999999999999998 6799999999999999999999999999999999999
Q ss_pred eechhhhhcceeEEE
Q 039838 427 GAGTGSKCGSVVLQC 441 (466)
Q Consensus 427 a~GsG~~~~s~v~r~ 441 (466)
++|+|++|+++++||
T Consensus 76 ~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 76 GFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEETTTEEEEEEEE-
T ss_pred EEEhhheeEEEEEEC
Confidence 999999999999997
No 40
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.82 E-value=1.5e-19 Score=162.66 Aligned_cols=118 Identities=14% Similarity=0.324 Sum_probs=92.7
Q ss_pred cceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHH
Q 039838 298 LGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAK 377 (466)
Q Consensus 298 ~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~ 377 (466)
..+.+++++|.+.+++++..+ +++|+ +.+ +. ..|+.+|++|+||++|++.+++
T Consensus 26 f~~~Ls~~vP~~i~~~i~~~~----------------------~~~L~-~~g-~~---~~~~~~wavHPGG~~ILd~v~~ 78 (151)
T PF02797_consen 26 FHFILSKEVPDLISDNIPPFV----------------------EDLLA-RHG-LS---DWDILFWAVHPGGRKILDAVEE 78 (151)
T ss_dssp EEEEE-TTHHHHHHHHHHHHH----------------------HHHHH-GGT-CC---SGGGSEEEEE-SSHHHHHHHHH
T ss_pred EEEEEhhHhHHHHHHHHHHHH----------------------HHHHh-hhc-cc---ccccceeeecCChHHHHHHHHH
Confidence 677899999998765544433 34455 455 44 2356799999999999999999
Q ss_pred HcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHH----cCCCCC---CCEEEEEeechhhhhcceeEEEe
Q 039838 378 NLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEA----KERVKK---GDRVWLIGAGTGSKCGSVVLQCL 442 (466)
Q Consensus 378 ~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~----~g~i~~---Gd~vllia~GsG~~~~s~v~r~~ 442 (466)
.|+|+++++++|+.+|++||||||+++++.|+++.+ +|.... +++++++|||+|++..++++|.+
T Consensus 79 ~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 79 ALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp HHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred HcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 999999999999999999999999999999999887 354433 48999999999999999999974
No 41
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.80 E-value=1.4e-19 Score=164.47 Aligned_cols=167 Identities=22% Similarity=0.340 Sum_probs=126.1
Q ss_pred CCCceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHH
Q 039838 58 KPSVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQ 137 (466)
Q Consensus 58 ~~~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~ 137 (466)
||++|+|.+++.|.|+.. |+.+++.++-+. ++. |+....|.++..+.++. |++.
T Consensus 1 ~p~~VGI~~i~~y~p~~~--v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~--------------ED~v 54 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRYY--VDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPD--------------EDIV 54 (174)
T ss_dssp --SSEEEEEEEEE-ESEE--EEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TT--------------S-HH
T ss_pred CCccccEeEEEEecCceE--ecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCc--------------ccHH
Confidence 799999999999999996 999998876443 222 44444455555665543 5688
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCC--CCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSM--KSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl--~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
+|+..|++++|++.+++|++|+.|++.+ |..+...+.+.+|++.||+ +.++..+|+.+ +|.|+..||+.|.+++++
T Consensus 55 TmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~-ACygGTaAL~~a~~~v~s 133 (174)
T PF01154_consen 55 TMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQ-ACYGGTAALQNAVNWVAS 133 (174)
T ss_dssp HHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEES-GGGHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhh-hhHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999987 6667788999999999999 55789999998 999999999999999999
Q ss_pred CC--CCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeec
Q 039838 215 QK--DSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNK 259 (466)
Q Consensus 215 ~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~ 259 (466)
++ .+++|||++|+.-.. .+.. ...-|-||+|+|++.+
T Consensus 134 ~~~~g~~aLVVasDiA~y~--~g~~------e~TqGAGAVAmLi~~n 172 (174)
T PF01154_consen 134 SPWDGRKALVVASDIARYD--LGSA------EPTQGAGAVAMLIGPN 172 (174)
T ss_dssp TTSTTEEEEEEEEEEE--S--TTTT------GGG-EEEEEEEEEECS
T ss_pred CCCCCCeEEEEeccccccC--CCCc------cccccceeEEEEecCC
Confidence 75 689999999997532 1111 2567999999999875
No 42
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.80 E-value=3.5e-18 Score=168.74 Aligned_cols=323 Identities=15% Similarity=0.211 Sum_probs=221.3
Q ss_pred CCCceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHH
Q 039838 58 KPSVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQ 137 (466)
Q Consensus 58 ~~~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~ 137 (466)
.|.+|+|.++.+|+|... |++++++.+-+.. .. .-..|+++....-. .-||+..
T Consensus 8 ~p~dvGI~aieiyfP~~y--V~Q~elEk~d~vs-------~g-----KytIGLGq~~Mgfc------------sdrEDi~ 61 (462)
T KOG1393|consen 8 WPKDVGIIAIEIYFPSQY--VDQEELEKFDGVS-------AG-----KYTIGLGQTQMGFC------------SDREDII 61 (462)
T ss_pred CccccceeEEEEEcCccc--cChhhHhhcCCcc-------cc-----ceEeccCcceeccc------------Cchhhhh
Confidence 577999999999999998 9999988753321 11 12467777654211 1246677
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcC--CCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYS--MKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lG--l~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.|+..+.++++++-+++++.|+.|-|.+ +.-.-..|.-..+++-++ -..++...|..+ +|.||..||-.|-+++++
T Consensus 62 Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiES 140 (462)
T KOG1393|consen 62 SLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIES 140 (462)
T ss_pred hhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhhh
Confidence 8999999999999999999999999976 555567788888888887 666899999998 999999999999999999
Q ss_pred CC--CCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCCCcccCcceEee-EEeeeecCCccccccCeee
Q 039838 215 QK--DSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVR-TVRTNKAFDDKAYNSGMRE 291 (466)
Q Consensus 215 ~~--~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~-~~~t~~~~d~~~~~~~~~~ 291 (466)
+. +++||||++|+.-.. .++-| +.=|-||.|+|+++...- .+.+ ...+|.. ..|+ +|.|
T Consensus 141 ssWDGr~aivV~gDIAvY~--~G~aR------pTGGAgAVAmLIgPnApi------~ferglr~thM~---hayD-FyKP 202 (462)
T KOG1393|consen 141 SSWDGRYAIVVCGDIAVYA--KGNAR------PTGGAGAVAMLIGPNAPI------IFERGLRATHMQ---HAYD-FYKP 202 (462)
T ss_pred cccCCceeEEEEeeEEEec--CCCCC------CCCCcceEEEEEcCCCce------Eecccchhhhhh---hhhh-ccCC
Confidence 86 899999999986421 33444 456999999999986542 1111 1123321 1232 3333
Q ss_pred ccCCCCcceEecchhhHHHHH-HHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHH
Q 039838 292 EDSNGKLGVTLNRDLLQIAGE-TLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRP 370 (466)
Q Consensus 292 ~d~~g~~g~~ls~d~~~~~~~-~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~ 370 (466)
. +..+.|.|+|. .+..+++.+. ..+......+.++-. +.++.. .+++|++++|.+--+
T Consensus 203 d---------l~SEyPvVDGklSi~cYl~Ald-------~cY~~~~kK~~~~~~--~~~~~~---l~~fdy~ifHsP~cK 261 (462)
T KOG1393|consen 203 D---------LLSEYPVVDGKLSIQCYLSALD-------RCYTVYRKKIAAQWQ--KSGSDN---LNSFDYIIFHSPYCK 261 (462)
T ss_pred C---------CCCcCceecCeehHHHHHHHHH-------HHHHHHHHHHHHHhc--cccCcc---cccCCeEEEeCchhh
Confidence 1 23455666654 2333443321 122222222222221 222232 569999999998665
Q ss_pred HHHH-HHH-----------------------------------------HcCCChhhHHHHHHhHhhcCccccchHHHHH
Q 039838 371 VIRE-IAK-----------------------------------------NLKLGERDIEAALMTLHRFGNQSSSSLWYEL 408 (466)
Q Consensus 371 vl~~-l~~-----------------------------------------~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L 408 (466)
+.+. +++ ...+-.+|+.+|...-++.||+.++|+...|
T Consensus 262 lvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l 341 (462)
T KOG1393|consen 262 LVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASL 341 (462)
T ss_pred hHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHH
Confidence 5433 111 1122233555555555789999999999999
Q ss_pred HHHHHcC--CCCCCCEEEEEeechhhhhcceeEEEecCCC
Q 039838 409 AYMEAKE--RVKKGDRVWLIGAGTGSKCGSVVLQCLRPIV 446 (466)
Q Consensus 409 ~~~~~~g--~i~~Gd~vllia~GsG~~~~s~v~r~~~~~~ 446 (466)
..++... .--.|.||.+.++|+|......-+|...+..
T Consensus 342 ~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~ 381 (462)
T KOG1393|consen 342 ASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDAT 381 (462)
T ss_pred HHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCC
Confidence 9998875 3347999999999999998888888877544
No 43
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.75 E-value=4.8e-17 Score=166.46 Aligned_cols=311 Identities=12% Similarity=0.087 Sum_probs=199.5
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccc-cCCChhhHHHH-----HHHHHHcCCCCeeecCCCccCCCCCCCHHHHH
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLV-ETFDSESMAFM-----SKVLTCSGQSEETYLPPALQYIPPKTNQQESI 133 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~-~~~~~~~~~f~-----~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~ 133 (466)
++|+|++.|+.-|=. .+.++....++.- .++... .++ ++|..++|+.+|++.. .
T Consensus 3 ~~v~I~~~g~vs~lG---~~~~~~~aa~ragi~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~---------------~ 62 (348)
T PRK06147 3 RALAIVGSGMVTAVG---LDAPSSCAAIRARLDNFQET--RFIDPPGGEWLIGAPVPLPPPWRG---------------P 62 (348)
T ss_pred CceEEEecceeecCc---CCHHHHHHHHHccccccccc--ccccCCCCCceEeecCcCCcccCc---------------h
Confidence 369999999999988 3656555544221 111110 110 1233344444443311 1
Q ss_pred HHHHHHHHHHHHHHHHHcC-CCcCCcCEEEEeec------CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHH
Q 039838 134 KEAQMVLFPVIENLLSKVQ-ISPQDIDILIINCS------GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAID 206 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~ag-i~~~dID~LI~~~s------~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~ 206 (466)
+...+|+..|++++|++++ +++++||++|+.++ ++...|.++..+++++|+.....++++.+ ||++++.||.
T Consensus 63 ~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~-~casg~~Al~ 141 (348)
T PRK06147 63 ERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIAR-GRVSGAVALA 141 (348)
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccc-cchHHHHHHH
Confidence 3355699999999999999 79999999998533 23334567889999999965577899998 9999999999
Q ss_pred HHHHHHhcCCCCeEEEEEeccccCC--C--C------CCCCcccccccccccccceeEEEeecCCCcccCcceEeeEEee
Q 039838 207 MAQALLKTQKDSDALVLSTEILSTG--W--Y------SGNEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRT 276 (466)
Q Consensus 207 lA~~ll~~~~~~~aLVVs~E~~s~~--~--~------~~~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t 276 (466)
.|.++|+.+..+.+||+++|..+.. + + ...++. ...+|||||+++||++.+.... .+-++.. ..
T Consensus 142 ~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~-rga~i~a-~g- 215 (348)
T PRK06147 142 QARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEA-PGLPLLG-LG- 215 (348)
T ss_pred HHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhc-CCCceEE-EE-
Confidence 9999999999999999999987652 1 0 011222 2679999999999998654321 1112221 10
Q ss_pred eecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCcc
Q 039838 277 NKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFK 356 (466)
Q Consensus 277 ~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~ 356 (466)
.+.+...+. . +.+.|. .++ .+....++.|+ +++ +. .
T Consensus 216 -~~~~~~~~~-------------~--~~~~p~-~g~----------------------gl~~ai~~AL~-~ag-l~---~ 251 (348)
T PRK06147 216 -LGREPAPVG-------------E--SEDLPL-RGD----------------------GLTQAIRAALA-EAG-CG---L 251 (348)
T ss_pred -EeecCCCcc-------------c--CCCCCC-ChH----------------------HHHHHHHHHHH-HcC-CC---H
Confidence 111111000 0 000010 011 11122345666 667 77 5
Q ss_pred ccccEEEecCCCHHHHHHH-----HHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHH---HcCCCCCCCEEEEEee
Q 039838 357 AAVQHFCLPVSGRPVIREI-----AKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYME---AKERVKKGDRVWLIGA 428 (466)
Q Consensus 357 ~did~~~~H~~~~~vl~~l-----~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~---~~g~i~~Gd~vllia~ 428 (466)
+|||+++.|..|....+.. .+.++-..+.. +...+-..+||+++++-.+++.... ++| .-+|+++++++-
T Consensus 252 ~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~-~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g-~~~g~~~L~~s~ 329 (348)
T PRK06147 252 EDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFF-DLWHPAECIGEIGAAIGPALLGVALAASRKG-YGPGPNVLCHLS 329 (348)
T ss_pred HHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCC-ceecchHhhcchHHHHHHHHHHHHHHHHHcC-cCCCCcEEEEec
Confidence 8999999999877664433 33444322221 1145667899999999999988644 344 457999999999
Q ss_pred chhhhhcceeEEEec
Q 039838 429 GTGSKCGSVVLQCLR 443 (466)
Q Consensus 429 GsG~~~~s~v~r~~~ 443 (466)
.-.-..++++++..+
T Consensus 330 ~d~g~r~a~~l~~~~ 344 (348)
T PRK06147 330 DDDGARAALVLEYRR 344 (348)
T ss_pred CCCCceEEEEEeccc
Confidence 988888999998554
No 44
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.72 E-value=8e-16 Score=152.49 Aligned_cols=116 Identities=16% Similarity=0.201 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQK 216 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~ 216 (466)
.+|+.+|+++||+++|++++|||.+|+++.++ .+..+..++++||+ +.+|+++ +|++++.||.+|..++++|.
T Consensus 51 ~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGI----P~fdV~~-ACSTf~~AL~lAa~lI~SG~ 123 (327)
T TIGR02845 51 RKLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGI----PFLGLYG-ACSTSMETLALGAMLVDGGF 123 (327)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCC----CEEEEec-cCHHHHHHHHHHHHHHhCCC
Confidence 45999999999999999999999999876443 34568899999997 3499998 99999999999999999999
Q ss_pred CCeEEEEEeccccC---CCC---CC--CCcccccccccccccceeEEEeecCCC
Q 039838 217 DSDALVLSTEILST---GWY---SG--NEKPKLLLNCLFRMGSVAVLLTNKKQA 262 (466)
Q Consensus 217 ~~~aLVVs~E~~s~---~~~---~~--~dr~~l~~~~lfgDGAaA~lLs~~~~~ 262 (466)
.++||||++|..+. .+. .+ ++|. +..+|+|||+|+||++.+..
T Consensus 124 ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~---ta~~tgdGAGA~vl~~~~~~ 174 (327)
T TIGR02845 124 ADRVLAATSSHYATAERQFRYPTEYGVQKPP---TAQWTVTGAGAVLLASTGGG 174 (327)
T ss_pred CCEEEEEEecccchhhhhcccccccccCCCC---eeeEEEcccEEEEEeecCCC
Confidence 99999999988872 111 11 4454 37899999999999987543
No 45
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.63 E-value=2.6e-14 Score=148.80 Aligned_cols=285 Identities=14% Similarity=0.139 Sum_probs=167.1
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhcccc-CCChhhHHHHHHHHHHcCCCCee--ecCCCc--cCCCCCCCHHHHH-
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVE-TFDSESMAFMSKVLTCSGQSEET--YLPPAL--QYIPPKTNQQESI- 133 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~--~~~~~~--~~~~~~~~~~~~~- 133 (466)
++|+|+|+|+..|.- .+.+++.+.+..-. .+.+-. +| +..+...+. .++... ..+++ .+.+
T Consensus 1 ~~i~I~G~g~~~p~g---~~~~~~~~~l~~g~~~~~~~~-~~-----~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~ 67 (406)
T cd00834 1 RRVVITGLGAVTPLG---NGVEEFWEALLAGRSGIRPIT-RF-----DASGFPSRIAGEVPDFDPEDYLDR----KELRR 67 (406)
T ss_pred CcEEEECcceeCCCc---CCHHHHHHHHHcCCCeeEECC-cc-----cccCCCccEEEEcCCCChhhcCCH----HHhcc
Confidence 479999999999998 48888888754311 011000 00 011111111 122110 01111 1111
Q ss_pred -HHHHHHHHHHHHHHHHHcCCCcCCcCE----EEEee-cCC--------------------------CCCCcHHHHHHHH
Q 039838 134 -KEAQMVLFPVIENLLSKVQISPQDIDI----LIINC-SGF--------------------------CPSPSLSSIIINK 181 (466)
Q Consensus 134 -~ea~~la~~Aa~~aL~~agi~~~dID~----LI~~~-s~~--------------------------~~~Ps~a~~I~~~ 181 (466)
.....|+..|++++|+++|+++++||. +++.+ ... ...+..+.+|+..
T Consensus 68 ~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 147 (406)
T cd00834 68 MDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIR 147 (406)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHH
Confidence 135569999999999999999876654 44433 221 1235678899999
Q ss_pred cCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC----------------------CCCCCCcc
Q 039838 182 YSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG----------------------WYSGNEKP 239 (466)
Q Consensus 182 lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~----------------------~~~~~dr~ 239 (466)
+|++ ..++.+.. +|++++.||..|.++|++|..+++||+++|..+.. ..+...+.
T Consensus 148 lgl~--g~~~~v~~-acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~ 224 (406)
T cd00834 148 LGLR--GPNYTVST-ACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR 224 (406)
T ss_pred hCCC--Ccccccch-HHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC
Confidence 9996 57889997 99999999999999999999999999999987610 10111111
Q ss_pred cccccccccccceeEEEeecCCCcccCcceEe-eEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhH
Q 039838 240 KLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVV-RTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANI 318 (466)
Q Consensus 240 ~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~-~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i 318 (466)
...++||||+|+||++.+...++ +-++. .+.......|+.. ... |...++
T Consensus 225 ---~g~~~geGA~a~vL~~~~~A~~~-g~~~~a~i~g~~~~~d~~~---~~~----------------~~~~~~------ 275 (406)
T cd00834 225 ---DGFVLGEGAGVLVLESLEHAKAR-GAKIYAEILGYGASSDAYH---ITA----------------PDPDGE------ 275 (406)
T ss_pred ---CCEeeeccEEEEEEecHHHHHHC-CCeEEEEEEEEEecccCCC---CCC----------------CCCCcH------
Confidence 25789999999999986543211 11111 1111111111110 000 000000
Q ss_pred hhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHH-----HHHHcCCChhhHHHHHHhH
Q 039838 319 TILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIRE-----IAKNLKLGERDIEAALMTL 393 (466)
Q Consensus 319 ~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~-----l~~~Lgl~~e~~~~s~~~l 393 (466)
.....++++++ +++ +. .+|||++.+|..|....|. +.+.++-..+++. ....=
T Consensus 276 ----------------~~~~~i~~al~-~ag-i~---~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~-v~s~k 333 (406)
T cd00834 276 ----------------GAARAMRAALA-DAG-LS---PEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVP-VSSTK 333 (406)
T ss_pred ----------------HHHHHHHHHHH-HcC-CC---HHHCCEEecccccCccccHHHHHHHHHHhcccCCCCc-eeCcc
Confidence 11123455666 667 77 5899999999887755443 4444554322321 12233
Q ss_pred hhcCccccchHHHHHHHH
Q 039838 394 HRFGNQSSSSLWYELAYM 411 (466)
Q Consensus 394 ~~~GNtssaSi~~~L~~~ 411 (466)
..+||+.++|-...|..+
T Consensus 334 ~~~Gh~~~AsG~~~l~~~ 351 (406)
T cd00834 334 SMTGHLLGAAGAVEAIAT 351 (406)
T ss_pred hhhccchhhhhHHHHHHH
Confidence 567999999988887654
No 46
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.61 E-value=5.4e-14 Score=139.86 Aligned_cols=116 Identities=17% Similarity=0.216 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKD 217 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~ 217 (466)
+|+.+|+++||+++|++++|||.+|++.... .+..+..+++.||+ +.+++.+ +|+++..||.+|..+++++..
T Consensus 58 eLa~eAa~~ALekAGI~~~DID~lI~Gdll~--Q~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG~a 130 (337)
T PRK08304 58 KMMEDAIQQALQKANLKKSDIDYLLAGDLLN--QIISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGGFA 130 (337)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCC--CcchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcCCC
Confidence 5999999999999999999999999876433 34678899999986 6899998 999999999999999999999
Q ss_pred CeEEEEEeccccCC---CCCC----CCcccccccccccccceeEEEeecCCC
Q 039838 218 SDALVLSTEILSTG---WYSG----NEKPKLLLNCLFRMGSVAVLLTNKKQA 262 (466)
Q Consensus 218 ~~aLVVs~E~~s~~---~~~~----~dr~~l~~~~lfgDGAaA~lLs~~~~~ 262 (466)
++||||++|..+.. |..+ ..|. .+..++++||+|+||++....
T Consensus 131 d~VLVV~Ssh~s~aerqfr~P~eyg~qrp--~taqwtvtGAGA~i~~~~~~~ 180 (337)
T PRK08304 131 DRVLAATSSHFATAERQFRFPTEYGGQRP--PTAQWTVTGAGAVLLSREGSG 180 (337)
T ss_pred CEEEEEEcchhhhhhhhccCchhccccCC--CcceEEeeccEEEEEecCCCC
Confidence 99999999998763 4222 2232 147899999999999987543
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.59 E-value=6.8e-14 Score=145.24 Aligned_cols=93 Identities=13% Similarity=0.162 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+.+|++++|+++|++++|||.||+++ +++...|..+..++..+|++.+++++++++ +|++++.+|.+|.+++++|
T Consensus 23 ~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~~-~c~s~~~al~~A~~~I~sG 101 (386)
T cd00751 23 DDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNR-VCGSGLQAVALAAQSIAAG 101 (386)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhcc-ccHHHHHHHHHHHHHHHCC
Confidence 45999999999999999999999999865 455557888888999999975589999997 9999999999999999999
Q ss_pred CCCeEEEEEeccccC
Q 039838 216 KDSDALVLSTEILST 230 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~ 230 (466)
..++|||+++|..|.
T Consensus 102 ~~~~vLv~g~e~~s~ 116 (386)
T cd00751 102 EADVVVAGGVESMSR 116 (386)
T ss_pred CCCeEEEeeeecccc
Confidence 999999999998653
No 48
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.52 E-value=7.2e-13 Score=137.82 Aligned_cols=93 Identities=15% Similarity=0.186 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+.+|++++|+++|++|+|||.+|++++ +....|..+..++..+|++..++++++++ +|++++.++..|.+++++|
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~~-~Casg~~ai~~A~~~I~sG 105 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNK-VCGSGLKALHLAAQAIRCG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEecc-cchhHHHHHHHHHHHHHcC
Confidence 459999999999999999999999999764 43346677888999999975589999998 9999999999999999999
Q ss_pred CCCeEEEEEeccccC
Q 039838 216 KDSDALVLSTEILST 230 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~ 230 (466)
..+++||+++|..|.
T Consensus 106 ~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 106 DAEVIIAGGQENMSL 120 (393)
T ss_pred CCCEEEEEEEhhhcc
Confidence 999999999997764
No 49
>PRK09051 beta-ketothiolase; Provisional
Probab=99.52 E-value=8.5e-13 Score=137.22 Aligned_cols=93 Identities=16% Similarity=0.175 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCC-CcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPS-PSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~-Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.+|+.+|++++|+++|++|+|||.+|+++ +++... +..+..+...+|++.+++++++++ +|++|+.|+.+|.+++++
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~~-aCaSg~~Al~~A~~~I~s 106 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVNR-LCGSGLQAIVSAAQAILL 106 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEecc-cchHHHHHHHHHHHHHHc
Confidence 35999999999999999999999999965 455544 345566667789976799999998 999999999999999999
Q ss_pred CCCCeEEEEEeccccC
Q 039838 215 QKDSDALVLSTEILST 230 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~ 230 (466)
|..+++||+++|.+|.
T Consensus 107 G~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 107 GDADVAIGGGAESMSR 122 (394)
T ss_pred CCCCEEEEEeehhccc
Confidence 9999999999998774
No 50
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.52 E-value=4.9e-13 Score=138.78 Aligned_cols=93 Identities=15% Similarity=0.212 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+.+|+++||+++|++++|||.+|+++ +++...|..+..++.++|++.+++++++++ +|++++.++.+|.+++++|
T Consensus 22 ~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~-~Casg~~al~~A~~~I~sG 100 (386)
T TIGR01930 22 EDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVNR-QCASGLQAVILAAQLIRAG 100 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeecc-hhhHHHHHHHHHHHHHHCC
Confidence 45999999999999999999999999865 355555777889999999985689999997 9999999999999999999
Q ss_pred CCCeEEEEEeccccC
Q 039838 216 KDSDALVLSTEILST 230 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~ 230 (466)
..+++||+++|..+.
T Consensus 101 ~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 101 EADVVVAGGVESMSR 115 (386)
T ss_pred CCCEEEEEEehhhcc
Confidence 999999999998654
No 51
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.49 E-value=1.2e-12 Score=136.18 Aligned_cols=93 Identities=15% Similarity=0.194 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHc-CCCcCCcCEEEEee-cCCCCCCcHHHHHH-HHcCCCCCceEEEecCCcchHHHHHHHHHHHHHh
Q 039838 137 QMVLFPVIENLLSKV-QISPQDIDILIINC-SGFCPSPSLSSIII-NKYSMKSDIKNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 137 ~~la~~Aa~~aL~~a-gi~~~dID~LI~~~-s~~~~~Ps~a~~I~-~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
.+|+.+|++++|+++ |++++|||.||+++ .++...|....+++ ..+|++..+++++|+. +|++|+.|+..|.++++
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~-aCaSg~~Al~~A~~~I~ 110 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNR-FCASGLQAVAMAADRIR 110 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeecc-hhhHHHHHHHHHHHHHH
Confidence 459999999999997 99999999999975 45555555556654 5559974589999998 99999999999999999
Q ss_pred cCCCCeEEEEEeccccC
Q 039838 214 TQKDSDALVLSTEILST 230 (466)
Q Consensus 214 ~~~~~~aLVVs~E~~s~ 230 (466)
+|..+.+||++.|..|.
T Consensus 111 sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 111 VGEADVMIAAGVESMSM 127 (399)
T ss_pred CCCCCEEEEEEEecccc
Confidence 99999999999998864
No 52
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.46 E-value=4.3e-12 Score=131.95 Aligned_cols=91 Identities=13% Similarity=0.164 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCC--CCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHh
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCS-GFCP--SPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~--~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
.+|+.+|++++|+++|++++|||.+|+.++ ++.. .|..+.+++..+|++ ..+++++++ +|++++.+|..|.++|+
T Consensus 23 ~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~-aCasg~~ai~~A~~~I~ 100 (389)
T PRK06064 23 RDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVEA-ACASGGAALRQAYLAVA 100 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEeC-CcHHHHHHHHHHHHHHH
Confidence 359999999999999999999999998653 3332 477889999999997 789999997 99999999999999999
Q ss_pred cCCCCeEEEEEecccc
Q 039838 214 TQKDSDALVLSTEILS 229 (466)
Q Consensus 214 ~~~~~~aLVVs~E~~s 229 (466)
+|..+++||+++|..+
T Consensus 101 sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 101 SGEADVVLAAGVEKMT 116 (389)
T ss_pred CCCCCEEEEEEEEecc
Confidence 9999999999999765
No 53
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.46 E-value=2.6e-12 Score=134.72 Aligned_cols=223 Identities=13% Similarity=0.105 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----EEEEeec-CCCC-------------------CCcHHHHHHHHcCCCCCceEE
Q 039838 136 AQMVLFPVIENLLSKVQISPQDID----ILIINCS-GFCP-------------------SPSLSSIIINKYSMKSDIKNF 191 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID----~LI~~~s-~~~~-------------------~Ps~a~~I~~~lGl~~~~~~~ 191 (466)
...|+..|++++|+++|+++++|| .|++.++ .++. .+..+..|+..+|++ -+++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCcc
Confidence 456999999999999999999998 6777643 2221 445778899999996 3789
Q ss_pred EecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC----------C------CCCCCcccccccccccccceeEE
Q 039838 192 NLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG----------W------YSGNEKPKLLLNCLFRMGSVAVL 255 (466)
Q Consensus 192 dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~----------~------~~~~dr~~l~~~~lfgDGAaA~l 255 (466)
.+.+ +|++++.||..|.++|++|..+++||+++|..... + ..+-+.. -...++||||+|+|
T Consensus 165 ~v~~-acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaalV 241 (424)
T smart00825 165 TVDT-ACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD--ADGYVRGEGVGVVV 241 (424)
T ss_pred cccc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC--CCcccccceEEEEE
Confidence 9998 99999999999999999999999999999974321 0 0001110 12578999999999
Q ss_pred EeecCCCcccCcceEe-eEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHH
Q 039838 256 LTNKKQAKRSSKYKVV-RTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWL 334 (466)
Q Consensus 256 Ls~~~~~~~~~~~~L~-~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~ 334 (466)
|++.+...++ +-++. .+......+++.. .... .|.. +
T Consensus 242 Le~~e~A~~~-g~~i~a~I~g~~~~~~~~~-~~~~----------------~~~~--~---------------------- 279 (424)
T smart00825 242 LKRLSDALRD-GDPILAVIRGSAVNQDGRS-NGLT----------------APSG--P---------------------- 279 (424)
T ss_pred EccHHHHHHC-CCeEEEEEEEEEEeCCCCC-CCCC----------------CcCH--H----------------------
Confidence 9975432211 11111 1112212222110 0000 0110 0
Q ss_pred HHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHH-----HHHHHHHcCCCh---hhHHHHHHhHhhcCccccchHHH
Q 039838 335 GVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPV-----IREIAKNLKLGE---RDIEAALMTLHRFGNQSSSSLWY 406 (466)
Q Consensus 335 ~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~v-----l~~l~~~Lgl~~---e~~~~s~~~l~~~GNtssaSi~~ 406 (466)
.....++++|+ +++ +. .+|||++.+|..+... .+.+.+.++... .++ +.-.+-..+||+.+++-.+
T Consensus 280 ~~~~a~~~al~-~Ag-l~---~~dId~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~-~v~s~k~~~Gh~~~AsG~~ 353 (424)
T smart00825 280 AQARLIRQALA-RAG-VD---PADVDYVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPL-LLGSVKSNIGHLEAAAGVA 353 (424)
T ss_pred HHHHHHHHHHH-HhC-CC---HHHccEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCce-EEeccccccCCcccchhHH
Confidence 00112345666 677 77 5899999999765432 334555554321 111 1122334579999999888
Q ss_pred HHHHH
Q 039838 407 ELAYM 411 (466)
Q Consensus 407 ~L~~~ 411 (466)
+|...
T Consensus 354 ~l~~~ 358 (424)
T smart00825 354 GLIKV 358 (424)
T ss_pred HHHHH
Confidence 88654
No 54
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.45 E-value=4.6e-12 Score=133.15 Aligned_cols=312 Identities=14% Similarity=0.143 Sum_probs=177.3
Q ss_pred ceEEEEeeeecCCCCCCCChHHHHHhhcccc-CCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHH
Q 039838 61 VTYLVDFSCYKPPCFCRVPFSSFLENSSLVE-TFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMV 139 (466)
Q Consensus 61 ~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 139 (466)
+|.|+|+|+..|-- .+.+++.+.+..-. .+.+ .++ +...++..+....-+ ..++.. ... ......+
T Consensus 12 ~VvITG~G~vs~~G---~~~~~~~~~L~~G~s~i~~-----~~~-~~~~~~~~~~~g~~~--~~~~~~-~~~-~~~~~~~ 78 (425)
T PRK06501 12 IVAVTGMGVVTSLG---QGKADNWAALTAGESGIHT-----ITR-FPTEGLRTRIAGTVD--FLPESP-FGA-SALSEAL 78 (425)
T ss_pred CEEEEeeeEECCCC---CCHHHHHHHHHcCCCceEc-----CCc-ccccCCCCceEEEEe--eccccc-ccc-cCHHHHH
Confidence 69999999999998 58899988764321 0000 000 001111111000000 001100 000 1123458
Q ss_pred HHHHHHHHHHHcCCCcCCcC------------------EEEEeec----------------CCC-------CCCcHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDID------------------ILIINCS----------------GFC-------PSPSLSSII 178 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID------------------~LI~~~s----------------~~~-------~~Ps~a~~I 178 (466)
+..|++++|+++|+++++.+ .++..+. +.. ..|+.+..|
T Consensus 79 ~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 158 (425)
T PRK06501 79 ARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRL 158 (425)
T ss_pred HHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHH
Confidence 89999999999999654422 1111110 111 356789999
Q ss_pred HHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc---------------ccCCC-------CCC-
Q 039838 179 INKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEI---------------LSTGW-------YSG- 235 (466)
Q Consensus 179 ~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~---------------~s~~~-------~~~- 235 (466)
+.++|++ .++++++. +|++++.||..|.++|+++..+++||+++|. .+... .+.
T Consensus 159 ~~~~gl~--G~~~~i~~-aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd 235 (425)
T PRK06501 159 ADRFGTR--GLPISLST-ACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFS 235 (425)
T ss_pred HHHhCCC--CCceeecC-ccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCC
Confidence 9999996 57899998 9999999999999999999999999999993 22110 000
Q ss_pred CCcccccccccccccceeEEEeecCCCcccCcceEeeEE-eeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHH
Q 039838 236 NEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTV-RTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETL 314 (466)
Q Consensus 236 ~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~-~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~ 314 (466)
.+|+ ..++||||+|+||++.+...+ .+.++...+ .+....|+ +. . ....|. ++
T Consensus 236 ~~r~----G~v~GEGaaalVLe~~~~A~~-rg~~i~a~i~g~~~~~d~--~~---~------------~~~~~~--~~-- 289 (425)
T PRK06501 236 KDRD----GFVMAEGAGALVLESLESAVA-RGAKILGIVAGCGEKADS--FH---R------------TRSSPD--GS-- 289 (425)
T ss_pred CCCC----CeeeeccEEEEEECcHHHHHH-CCCeEEEEEEEEEEccCC--CC---C------------CCCCCC--HH--
Confidence 2333 578999999999998553221 122232222 11111111 00 0 000010 00
Q ss_pred HHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHH-----HHcCCChhhHHHH
Q 039838 315 RANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIA-----KNLKLGERDIEAA 389 (466)
Q Consensus 315 ~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~-----~~Lgl~~e~~~~s 389 (466)
.....++++|+ +++ +. .+|||++..|..+....|..+ +.++-...++ +.
T Consensus 290 --------------------~~~~ai~~AL~-~ag-i~---p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~-pv 343 (425)
T PRK06501 290 --------------------PAIGAIRAALA-DAG-LT---PEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASI-PV 343 (425)
T ss_pred --------------------HHHHHHHHHHH-HcC-CC---HHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCc-EE
Confidence 01123456666 677 77 489999999998877665543 3344211122 10
Q ss_pred HHhHhhcCccccchHHHHHHH---HHHcCCCCC------------------------CCEEEEEeechhhhhcceeEE
Q 039838 390 LMTLHRFGNQSSSSLWYELAY---MEAKERVKK------------------------GDRVWLIGAGTGSKCGSVVLQ 440 (466)
Q Consensus 390 ~~~l~~~GNtssaSi~~~L~~---~~~~g~i~~------------------------Gd~vllia~GsG~~~~s~v~r 440 (466)
..+=..+||+.+++-.+++.. .+++|.+.+ -+.++.-+||.|-.-.+++++
T Consensus 344 ~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~ 421 (425)
T PRK06501 344 SSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLT 421 (425)
T ss_pred ECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEe
Confidence 122245799999887777743 344443321 234566678877776766665
No 55
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.45 E-value=3e-12 Score=133.08 Aligned_cols=93 Identities=12% Similarity=0.217 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCc-HHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPS-LSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps-~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.+|+..|++++|+++|++|+|||.+|+.+ .++...|+ .+..++.++|++.++++++++. +|++++.|+.+|..++++
T Consensus 28 ~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~~-aCaSg~~Al~~A~~~I~s 106 (392)
T PRK07108 28 ATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNR-FCSSGLQTIALAAQRVIA 106 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeecc-hhhHHHHHHHHHHHHHHC
Confidence 45999999999999999999999999965 45555554 8889999999986799999997 999999999999999999
Q ss_pred CCCCeEEEEEeccccC
Q 039838 215 QKDSDALVLSTEILST 230 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~ 230 (466)
|..+.+|+++.|.+|.
T Consensus 107 G~~d~vlagGvE~ms~ 122 (392)
T PRK07108 107 GEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCEEEEEEEeccCC
Confidence 9999999999999885
No 56
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.44 E-value=8.7e-12 Score=128.78 Aligned_cols=93 Identities=15% Similarity=0.172 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
..+|+.+|++++|+++|++++|||.+++.++ +....|..+.+++.++|++ .+++++++. +|++++.++..|.+++++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~-~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEA-AGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeC-ccHHHHHHHHHHHHHHHh
Confidence 3469999999999999999999999998653 4444577889999999997 789999997 999999999999999999
Q ss_pred CCCCeEEEEEeccccC
Q 039838 215 QKDSDALVLSTEILST 230 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~ 230 (466)
+..+.+||+++|..+.
T Consensus 94 G~~~~vlv~g~e~~s~ 109 (375)
T cd00829 94 GLADVVLVVGAEKMSD 109 (375)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 57
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.43 E-value=9.3e-12 Score=129.24 Aligned_cols=91 Identities=12% Similarity=0.066 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCC--CCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGFCP--SPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~--~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.+|+.+|++++|+++|++++|||.+|++++++.. .+..+..++++||++ ..+++++++ +|+++..++..|..+|++
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~~-~casg~~al~~A~~~I~s 102 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVHT-AGSVGGSTAVVAASLVQS 102 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEec-cCHHHHHHHHHHHHHHHC
Confidence 3599999999999999999999999987544332 122336899999997 688999998 999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 039838 215 QKDSDALVLSTEILS 229 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s 229 (466)
|..++||||++|..+
T Consensus 103 G~~~~vLVvg~e~~s 117 (386)
T PRK08313 103 GVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCEEEEEEEEEcc
Confidence 999999999999764
No 58
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.42 E-value=1.2e-11 Score=128.89 Aligned_cols=316 Identities=14% Similarity=0.073 Sum_probs=176.3
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhcccc-CCChhhHHHHHHHHHHcCCCCee--ecCCCccCCCCCCCHHHHH--H
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVE-TFDSESMAFMSKVLTCSGQSEET--YLPPALQYIPPKTNQQESI--K 134 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~~~~~~~~--~ 134 (466)
++|.|+|+|+..|.- .+.+++.+.+..-. .+.+- .+ +...+...+. .++. ...... .+..+.+ .
T Consensus 1 ~~v~ItG~g~~~p~g---~~~~~~~~~l~~g~s~~~~~-----~~-~~~~~~~~~~~g~i~~-f~~~~~-~~~~~~~~~~ 69 (407)
T TIGR03150 1 RRVVVTGLGAVTPLG---NGVEEFWENLLAGKSGIGPI-----TR-FDASDLPVKIAGEVKD-FDPEDY-IDKKEARRMD 69 (407)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHcCCCeeEEC-----Cc-ccccCCCCcEEEEeCC-cChhhc-CCHHHHhhcC
Confidence 478999999999998 48899988764311 01100 00 0000111110 1111 000000 0111111 1
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCE----EEEeecCC------------------CC--------CC-cHHHHHHHHcC
Q 039838 135 EAQMVLFPVIENLLSKVQISPQDIDI----LIINCSGF------------------CP--------SP-SLSSIIINKYS 183 (466)
Q Consensus 135 ea~~la~~Aa~~aL~~agi~~~dID~----LI~~~s~~------------------~~--------~P-s~a~~I~~~lG 183 (466)
....|+..|++++|+++|+++++||. +++.++.. .. .+ ..+..|...+|
T Consensus 70 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T TIGR03150 70 RFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYG 149 (407)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhC
Confidence 23569999999999999999999886 55543210 00 11 24567888999
Q ss_pred CCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC-----------C--CC--------CCCccccc
Q 039838 184 MKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG-----------W--YS--------GNEKPKLL 242 (466)
Q Consensus 184 l~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~-----------~--~~--------~~dr~~l~ 242 (466)
++ .+++.+.. +|++++.||..|..+|++|..+.+||++.|..... + +. +-++. -
T Consensus 150 l~--g~~~~v~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~--~ 224 (407)
T TIGR03150 150 AK--GPNHAVVT-ACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD--R 224 (407)
T ss_pred CC--Cccccccc-HHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC--C
Confidence 95 57788887 99999999999999999999999999999963221 0 00 00111 0
Q ss_pred ccccccccceeEEEeecCCCcccCcceEe-eEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhh
Q 039838 243 LNCLFRMGSVAVLLTNKKQAKRSSKYKVV-RTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITIL 321 (466)
Q Consensus 243 ~~~lfgDGAaA~lLs~~~~~~~~~~~~L~-~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~ 321 (466)
...+.||||+|+||++.+...++ +-++. .+.......|... ... |...++
T Consensus 225 ~g~~~gEGAaalvL~~~~~A~~~-g~~i~a~i~g~~~~~d~~~---~~~----------------~~~~~~--------- 275 (407)
T TIGR03150 225 DGFVMGEGAGVLVLEELEHAKAR-GAKIYAEIVGYGMSGDAYH---ITA----------------PAPEGE--------- 275 (407)
T ss_pred CcEEEeceEEEEEEeeHHHHHHC-CCeEEEEEEEEEECCCCCC---CCC----------------CCCCcH---------
Confidence 24678999999999986533211 11111 1111111111110 000 000000
Q ss_pred cccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHH-----HHHHHHHcCCChhhHHHHHHhHhhc
Q 039838 322 GFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPV-----IREIAKNLKLGERDIEAALMTLHRF 396 (466)
Q Consensus 322 g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~v-----l~~l~~~Lgl~~e~~~~s~~~l~~~ 396 (466)
.....++++|+ +++ +. .+|||++..|..+-.. ...+.+.++-...++. .-..=..+
T Consensus 276 -------------~~~~ai~~Al~-~Ag-i~---~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~-v~s~k~~~ 336 (407)
T TIGR03150 276 -------------GAARAMRAALK-DAG-IN---PEDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLA-VSSTKSMT 336 (407)
T ss_pred -------------HHHHHHHHHHH-HcC-CC---HhHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCc-eeCCcchh
Confidence 01123456676 677 77 5899999999887633 3445666664322221 01122446
Q ss_pred CccccchHHHHHHH---HHHcCCCC------------------------CCCEEEEEeechhhhhcceeE
Q 039838 397 GNQSSSSLWYELAY---MEAKERVK------------------------KGDRVWLIGAGTGSKCGSVVL 439 (466)
Q Consensus 397 GNtssaSi~~~L~~---~~~~g~i~------------------------~Gd~vllia~GsG~~~~s~v~ 439 (466)
||+.+++-...+.. .+++|.+. +-.+++.-+||.|-+-.++++
T Consensus 337 Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl 406 (407)
T TIGR03150 337 GHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVPNEARERKIDYALSNSFGFGGHNASLVF 406 (407)
T ss_pred chhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCCCCccCCcCEEEEecccCCCceEEEEe
Confidence 99988876666544 34443211 124667778888766665554
No 59
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.42 E-value=1.3e-11 Score=128.56 Aligned_cols=94 Identities=12% Similarity=0.227 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCC-CcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHh
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPS-PSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~-Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
+.+|+..|++++|+++|++|+|||.||+.+ ++.... +..+.......|++.++++++|+. +|++++.||.+|.++++
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn~-aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINR-FCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEcc-hhhhHHHHHHHHHHHHH
Confidence 346999999999999999999999999976 444333 345666668889976799999997 99999999999999999
Q ss_pred cCCCCeEEEEEeccccC
Q 039838 214 TQKDSDALVLSTEILST 230 (466)
Q Consensus 214 ~~~~~~aLVVs~E~~s~ 230 (466)
+|..+.+|++++|.+|.
T Consensus 107 sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 107 SGWDDLVIAGGVESMSR 123 (402)
T ss_pred cCCCCEEEEEEEEccCC
Confidence 99999999999999886
No 60
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.42 E-value=8.3e-12 Score=130.29 Aligned_cols=222 Identities=12% Similarity=0.064 Sum_probs=137.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCC-cC----EEEEeec-C----------------------CCCC--CcHHHHHHHHcCCC
Q 039838 136 AQMVLFPVIENLLSKVQISPQD-ID----ILIINCS-G----------------------FCPS--PSLSSIIINKYSMK 185 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~d-ID----~LI~~~s-~----------------------~~~~--Ps~a~~I~~~lGl~ 185 (466)
...|+..|++++|+++|+++++ ++ .+++.++ . .... ...+..|...+|++
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~ 151 (407)
T cd00828 72 TTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSS 151 (407)
T ss_pred HHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCcC
Confidence 4569999999999999998765 33 2333322 1 0111 45778899999993
Q ss_pred CCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccC---------------------CCCCCCCccccccc
Q 039838 186 SDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILST---------------------GWYSGNEKPKLLLN 244 (466)
Q Consensus 186 ~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~---------------------~~~~~~dr~~l~~~ 244 (466)
.-+++.+.+ +|++++.||..|.++|++|..+.+||.++|..+. ...+...+. ..
T Consensus 152 -~Gp~~tv~~-aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~---~G 226 (407)
T cd00828 152 -HGPIKTPVG-ACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETR---DG 226 (407)
T ss_pred -CCCCcCccc-HHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCC---Cc
Confidence 357899998 9999999999999999999999999999998651 010111111 25
Q ss_pred ccccccceeEEEeecCCCcccCcceEee-EEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcc
Q 039838 245 CLFRMGSVAVLLTNKKQAKRSSKYKVVR-TVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGF 323 (466)
Q Consensus 245 ~lfgDGAaA~lLs~~~~~~~~~~~~L~~-~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~ 323 (466)
+++||||+|+||++.+...++. -++.. +.......|+... ..+. .++
T Consensus 227 ~~~gEGAaalvLe~~~~A~~rg-~~i~a~i~g~~~~~d~~~~-------------------~~~~-~~~----------- 274 (407)
T cd00828 227 FVEAEGAGVLVLERAELALARG-APIYGRVAGTASTTDGAGR-------------------SVPA-GGK----------- 274 (407)
T ss_pred EEeecceEEEEEeeHHHHHHCC-CeEEEEEEEEEeccCCCCC-------------------CCCC-ChH-----------
Confidence 7899999999999865432111 11111 1111111111100 0000 000
Q ss_pred cccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHH-----HHHHcCCChhhHHHHHHhHhhcCc
Q 039838 324 KILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIRE-----IAKNLKLGERDIEAALMTLHRFGN 398 (466)
Q Consensus 324 ~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~-----l~~~Lgl~~e~~~~s~~~l~~~GN 398 (466)
.....++++++ +++ +. .+|||++..|..+....|. +.+.++-..+.+ +...+-..+||
T Consensus 275 -----------~~~~a~~~Al~-~Ag-i~---~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~-~v~s~K~~~Gh 337 (407)
T cd00828 275 -----------GIARAIRTALA-KAG-LS---LDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPL-PVTAQKALFGH 337 (407)
T ss_pred -----------HHHHHHHHHHH-HcC-CC---HHHcCEEecccccCccccHHHHHHHHHHHhccCCCc-eeecccchhcc
Confidence 01122345666 677 77 5899999999776654433 333443211111 11345578999
Q ss_pred cccchHHHHHHHH
Q 039838 399 QSSSSLWYELAYM 411 (466)
Q Consensus 399 tssaSi~~~L~~~ 411 (466)
+.+++-.++|...
T Consensus 338 ~~~Asg~~~l~~~ 350 (407)
T cd00828 338 SKGAAGALQLIGA 350 (407)
T ss_pred chhhhhHHHHHHH
Confidence 9999998888653
No 61
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=9.4e-12 Score=129.44 Aligned_cols=93 Identities=13% Similarity=0.151 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+.+|++++|+++|++|+|||.+|+++. +....+..+..++..+|++.++++++++. +|++++.|+..|..++++|
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~~-~CaSg~~Al~~A~~~I~sG 105 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNK-VCASGLRAVTLADQIIRAG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehhh-hhhHHHHHHHHHHHHHHCC
Confidence 459999999999999999999999999764 32123455567899999976799999998 9999999999999999999
Q ss_pred CCCeEEEEEeccccC
Q 039838 216 KDSDALVLSTEILST 230 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~ 230 (466)
..+++||+++|..|.
T Consensus 106 ~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 106 DASVIVAGGMESMSN 120 (393)
T ss_pred CCCEEEEEeeecccc
Confidence 999999999998875
No 62
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.41 E-value=5.2e-11 Score=124.51 Aligned_cols=120 Identities=18% Similarity=0.187 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEEeec-CCC-------------------CCCcHHHHHHHHcCCCCCceEE
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDI----LIINCS-GFC-------------------PSPSLSSIIINKYSMKSDIKNF 191 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~----LI~~~s-~~~-------------------~~Ps~a~~I~~~lGl~~~~~~~ 191 (466)
...|+..|++++|+++|++++++|. +++.++ .++ ..+..+..++..+|++ .+++
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~~ 164 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPSL 164 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCce
Confidence 4679999999999999999888774 555432 211 1245678899999996 4889
Q ss_pred EecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC-----------------CCCCCCcccccccccccccceeE
Q 039838 192 NLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG-----------------WYSGNEKPKLLLNCLFRMGSVAV 254 (466)
Q Consensus 192 dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~-----------------~~~~~dr~~l~~~~lfgDGAaA~ 254 (466)
.+.+ +|++++.||..|.++|++|..+.+||+++|..... ..+...+. ...++||||+|+
T Consensus 165 ~v~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~---~g~~~geGAaal 240 (421)
T cd00833 165 TVDT-ACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADA---DGYVRGEGVGVV 240 (421)
T ss_pred eecc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCC---CCeeeeceEEEE
Confidence 9998 99999999999999999999999999999975310 11111111 257899999999
Q ss_pred EEeecCC
Q 039838 255 LLTNKKQ 261 (466)
Q Consensus 255 lLs~~~~ 261 (466)
||++.+.
T Consensus 241 vL~~~~~ 247 (421)
T cd00833 241 VLKRLSD 247 (421)
T ss_pred EEeeHHH
Confidence 9998654
No 63
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.41 E-value=3.8e-13 Score=108.46 Aligned_cols=66 Identities=26% Similarity=0.468 Sum_probs=54.3
Q ss_pred EEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCC
Q 039838 191 FNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQ 261 (466)
Q Consensus 191 ~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~ 261 (466)
|||++ +|+|++.||++|+++++++..++||||++|+.+..+ +..++. ...+|||||+|+||++.++
T Consensus 1 fDi~~-~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~-~~~~~~---~~~~~gDgAaA~vl~~~~~ 66 (80)
T PF08545_consen 1 FDINQ-ACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIV-DRTDRQ---TAFIFGDGAAAVVLSRDEE 66 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGS-HTTHHH---HHTTB-EEEEEEEEEEESS
T ss_pred Ccccc-cchHHHHHHHHHHHHHhhccCCEEEEEeeccccccc-cccccC---cceeecchheEEEEEecCC
Confidence 79998 999999999999999999999999999999999844 333443 2568999999999999843
No 64
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=9.5e-12 Score=129.94 Aligned_cols=93 Identities=17% Similarity=0.233 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+.+|++++|+++|++++|||.+|+++ ++....|..+.+++..+|++.++++++++. +|++++.|+..|.+++++|
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~~-~CaSg~~Al~~A~~~I~sG 105 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLDR-RCGSGLQAVITAAMQVQTG 105 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehhh-hhhHHHHHHHHHHHHHHcC
Confidence 45999999999999999999999999975 456667888889999999976789999997 9999999999999999999
Q ss_pred CCCeEEEEEeccccC
Q 039838 216 KDSDALVLSTEILST 230 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~ 230 (466)
..+.+||++.|..|.
T Consensus 106 ~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 106 AADVVIAGGAESMSN 120 (404)
T ss_pred CCCEEEEeeehhhcc
Confidence 999999999998774
No 65
>PRK05790 putative acyltransferase; Provisional
Probab=99.39 E-value=2.7e-11 Score=126.19 Aligned_cols=92 Identities=13% Similarity=0.177 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+.+|++++|+++|++++|||.+|+.+ .+....+..+..++..+|++.++++++++. +|++++.|+..|.+++++|
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~-~Casg~~al~~A~~~I~sG 105 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTINK-VCGSGLKAVALAAQAIRAG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeecc-cchHHHHHHHHHHHHHHcC
Confidence 45999999999999999999999999865 332224445566777889975688999998 9999999999999999999
Q ss_pred CCCeEEEEEecccc
Q 039838 216 KDSDALVLSTEILS 229 (466)
Q Consensus 216 ~~~~aLVVs~E~~s 229 (466)
..+++||++.|..|
T Consensus 106 ~~d~vLv~G~e~~s 119 (393)
T PRK05790 106 DADIVVAGGQESMS 119 (393)
T ss_pred CCCEEEEEeeeccc
Confidence 99999999999753
No 66
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.38 E-value=2.1e-11 Score=127.04 Aligned_cols=93 Identities=11% Similarity=0.132 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+..|++++|+++|++|+|||.+|+.++ +.......+......+|++.++++++++. +|++++.|+..|.+++++|
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~~-aCaSG~~Av~~A~~~I~sG 110 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNK-MCGSGMRAAMFAHDMLVAG 110 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeeccc-cchHHHHHHHHHHHHHHCC
Confidence 459999999999999999999999999754 33333344444555677776699999997 9999999999999999999
Q ss_pred CCCeEEEEEeccccC
Q 039838 216 KDSDALVLSTEILST 230 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~ 230 (466)
..+.+||++.|..|.
T Consensus 111 ~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 111 SVDVIVAGGMESMTN 125 (397)
T ss_pred CCCEEEEEeeeccCC
Confidence 999999999999883
No 67
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.36 E-value=5.7e-11 Score=123.39 Aligned_cols=91 Identities=11% Similarity=0.149 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQK 216 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~ 216 (466)
+|+.+|++++|+++|++++|||.+|++++ +....+..+..++..+|++ +..++++++ +|++++.||..|..+|++|.
T Consensus 23 eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~~-~casg~~al~~A~~~I~sG~ 100 (385)
T PRK12578 23 ELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVEA-MCATGLAASLTAYTAVASGL 100 (385)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEec-cCHHHHHHHHHHHHHHHCCC
Confidence 59999999999999999999999998753 3222233478899999997 567899997 99999999999999999999
Q ss_pred CCeEEEEEeccccC
Q 039838 217 DSDALVLSTEILST 230 (466)
Q Consensus 217 ~~~aLVVs~E~~s~ 230 (466)
.+++|||++|..+.
T Consensus 101 ~~~vLvvg~e~~s~ 114 (385)
T PRK12578 101 VDMAIAVGVDKMTE 114 (385)
T ss_pred CCEEEEEEEeeccc
Confidence 99999999998653
No 68
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.36 E-value=7.8e-11 Score=123.22 Aligned_cols=316 Identities=14% Similarity=0.057 Sum_probs=179.5
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhcccc-CCChhhHHHHHHHHHHcCCCCee--ecCCCc--cCCCCCCCHHHHH-
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVE-TFDSESMAFMSKVLTCSGQSEET--YLPPAL--QYIPPKTNQQESI- 133 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~--~~~~~~--~~~~~~~~~~~~~- 133 (466)
++|.|+|+||..|-- .+.+++.+.+..-. .+.+- .+ +...+...+. .+++.. ..+++ .+.+
T Consensus 2 ~~v~ItG~g~~~p~g---~~~~~~w~~l~~g~~~~~~~-----~~-~~~~~~~~~~~g~i~~f~~~~~~~~----~~~~~ 68 (411)
T PRK07314 2 RRVVVTGLGAVSPLG---NDVESTWKNLLAGKSGIGPI-----TH-FDTSDLAVKIAGEVKDFNPDDYMSR----KEARR 68 (411)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHhCCCcEEEC-----Cc-ccccCCCccEEEEeCCcChhhcCCH----HHhhc
Confidence 579999999999998 58899988764311 01000 00 0001111110 111100 00111 1111
Q ss_pred -HHHHHHHHHHHHHHHHHcCCCcCCcC----EEEEeecCC----------------------C----CCC-cHHHHHHHH
Q 039838 134 -KEAQMVLFPVIENLLSKVQISPQDID----ILIINCSGF----------------------C----PSP-SLSSIIINK 181 (466)
Q Consensus 134 -~ea~~la~~Aa~~aL~~agi~~~dID----~LI~~~s~~----------------------~----~~P-s~a~~I~~~ 181 (466)
.-...|+..|++++|+++|++++++| .+++.++.. . ..+ ..+..|...
T Consensus 69 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 148 (411)
T PRK07314 69 MDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIR 148 (411)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHH
Confidence 12446999999999999999999888 455543211 0 111 255778999
Q ss_pred cCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCCC---------------------CCCCCccc
Q 039838 182 YSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTGW---------------------YSGNEKPK 240 (466)
Q Consensus 182 lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~---------------------~~~~dr~~ 240 (466)
+|++ -+++-+.. +|++++.||..|.++|++|..+.+||.+.|...... ..+-|+..
T Consensus 149 ~gl~--Gp~~tv~~-acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~ 225 (411)
T PRK07314 149 YGAK--GPNHSIVT-ACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR 225 (411)
T ss_pred hCCC--Cccccchh-hhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC
Confidence 9996 46777887 899999999999999999999999999998643210 00001110
Q ss_pred ccccccccccceeEEEeecCCCcccCcceE-eeEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHh
Q 039838 241 LLLNCLFRMGSVAVLLTNKKQAKRSSKYKV-VRTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANIT 319 (466)
Q Consensus 241 l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L-~~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~ 319 (466)
..+++||||+|+||++.+...++ +-++ ..+.......|... ... |...+.
T Consensus 226 --dG~~~geGAaavvL~~~~~A~~~-g~~~~a~I~g~~~~~d~~~---~~~----------------~~~~~~------- 276 (411)
T PRK07314 226 --DGFVMGEGAGILVLEELEHAKAR-GAKIYAEVVGYGMTGDAYH---MTA----------------PAPDGE------- 276 (411)
T ss_pred --CCEeEEceEEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCC----------------CCCCcH-------
Confidence 25789999999999986432211 1111 11111111111110 000 000000
Q ss_pred hhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHH-----HHHHcCCChhhHHHHHHhHh
Q 039838 320 ILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIRE-----IAKNLKLGERDIEAALMTLH 394 (466)
Q Consensus 320 ~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~-----l~~~Lgl~~e~~~~s~~~l~ 394 (466)
.....++++++ +++ +. .+|||++..|..+-...|. +.+.++....++. .-..=.
T Consensus 277 ---------------~~~~a~~~Al~-~ag-i~---~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~-v~s~k~ 335 (411)
T PRK07314 277 ---------------GAARAMKLALK-DAG-IN---PEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVA-VSSTKS 335 (411)
T ss_pred ---------------HHHHHHHHHHH-HcC-CC---HHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCe-eECccc
Confidence 01123345666 677 77 5899999999987655444 4455553322321 011224
Q ss_pred hcCccccchHHHHHHH---HHHcCCCC------------------------CCCEEEEEeechhhhhcceeEEE
Q 039838 395 RFGNQSSSSLWYELAY---MEAKERVK------------------------KGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 395 ~~GNtssaSi~~~L~~---~~~~g~i~------------------------~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
.+||+.+++-..++.. .++.|.+. +-++++.-+||.|-.-.+++++.
T Consensus 336 ~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~ 409 (411)
T PRK07314 336 MTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFKR 409 (411)
T ss_pred hhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEec
Confidence 5699888876666543 33444321 22467778888888777777763
No 69
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.35 E-value=2.2e-10 Score=113.59 Aligned_cols=116 Identities=16% Similarity=0.222 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQK 216 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~ 216 (466)
.+|+.+|+++||+++|++++|||.+++.+......|+ ..++++||++ .+++.+ +|+++..||.+|..++++|.
T Consensus 55 ~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaSG~ 127 (334)
T PRK12404 55 RKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNSGG 127 (334)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHcCC
Confidence 3599999999999999999999999998755656666 4899999964 499998 99999999999999999999
Q ss_pred CCeEEEEEeccccC---CCCC----CCCcccccccccccccceeEEEeecCC
Q 039838 217 DSDALVLSTEILST---GWYS----GNEKPKLLLNCLFRMGSVAVLLTNKKQ 261 (466)
Q Consensus 217 ~~~aLVVs~E~~s~---~~~~----~~dr~~l~~~~lfgDGAaA~lLs~~~~ 261 (466)
.++||++++--.+. .|.. +..|. .+...---||+|+||++...
T Consensus 128 Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp--~taqwTvTgaga~~l~~~~~ 177 (334)
T PRK12404 128 AKYVLTGASSHNAAVEKQFRYPTEYGGQKP--PTAQWTVTGAGAAILSKTGD 177 (334)
T ss_pred CCEEEEEeCcccchhhhhccCcccccCcCC--CcccEEEEceEEEEEecCCC
Confidence 99999998765443 2322 22232 12445567999999997643
No 70
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=4.3e-11 Score=124.61 Aligned_cols=90 Identities=17% Similarity=0.285 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCC---CCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHH
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINC-SGFCP---SPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALL 212 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~---~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll 212 (466)
.+|+.+|++++|+++|++|+|||.+|+.+ .++.. .++....+...++ .++++++++. +|++++.++..|.+++
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~~-~CaSg~~ai~~A~~~I 109 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVDR-QCASSLTTVSIGAMEI 109 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhhh-hhHHHHHHHHHHHHHH
Confidence 35999999999999999999999999965 34332 2344455666665 3689999997 9999999999999999
Q ss_pred hcCCCCeEEEEEecccc
Q 039838 213 KTQKDSDALVLSTEILS 229 (466)
Q Consensus 213 ~~~~~~~aLVVs~E~~s 229 (466)
++|..+++||++.|..|
T Consensus 110 ~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 110 ATGMADIVIAGGVEHMT 126 (394)
T ss_pred HcCCCCEEEEeeecccc
Confidence 99999999999999766
No 71
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=8e-11 Score=122.39 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCC-CCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCS-GFCP-SPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~-~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.+|+..|++++|+++|+.++|||.+|+.++ ++.. .+..+.+++..+|++..++++++++ +|++|+.|+..|...+++
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~~-aCaSG~~Al~~A~~~I~s 106 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINR-YCSSGLQSIAYGAERIML 106 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehhh-hhhHHHHHHHHHHHHHHc
Confidence 359999999999999988899999999753 4333 4777888999999975699999998 999999999999999999
Q ss_pred CCCCeEEEEEeccccC
Q 039838 215 QKDSDALVLSTEILST 230 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~ 230 (466)
|..+.+||++.|.+|.
T Consensus 107 G~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 107 GHSEAVIAGGAESMSL 122 (391)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 72
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.30 E-value=1.7e-10 Score=120.09 Aligned_cols=94 Identities=16% Similarity=0.200 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC-CC-CCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHh
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINCSGF-CP-SPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~-~~-~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
+.+|+..+++.+++++|++|++||.||+.|... -. .+..+.+.+-+-|++.+++++.|+. -|++++.|+.+|.+.++
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvnr-~C~Sgl~ai~~aa~~I~ 107 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDR-FCGGGITSVNLAAAQIM 107 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeecc-ccchHHHHHHHHHHHHH
Confidence 456999999999999999999999999976532 22 4778999999999998999999996 89999999999999999
Q ss_pred cCCCCeEEEEEeccccC
Q 039838 214 TQKDSDALVLSTEILST 230 (466)
Q Consensus 214 ~~~~~~aLVVs~E~~s~ 230 (466)
+|..+-+|..+.|.+|+
T Consensus 108 ~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 108 SGMEDLVIAGGTEMMSY 124 (417)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999996
No 73
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.29 E-value=1.4e-10 Score=121.47 Aligned_cols=249 Identities=13% Similarity=0.149 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHHHHHcCCC---cCCcCEEEEeec----------------CCCCCC---------cHHHHHHHHcCCCCC
Q 039838 136 AQMVLFPVIENLLSKVQIS---PQDIDILIINCS----------------GFCPSP---------SLSSIIINKYSMKSD 187 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~---~~dID~LI~~~s----------------~~~~~P---------s~a~~I~~~lGl~~~ 187 (466)
...|+..|++++|+++|++ +++|++++-++. +.+..| ..+..|+..||++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 4469999999999999986 466776665432 111112 2567788999996
Q ss_pred ceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc-ccCC-----------------------CCCC-CCccccc
Q 039838 188 IKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEI-LSTG-----------------------WYSG-NEKPKLL 242 (466)
Q Consensus 188 ~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~-~s~~-----------------------~~~~-~dr~~l~ 242 (466)
-+++.+++ +|++++.||..|.++|+++..+.+||+++|. .+.. ..+. .+++
T Consensus 158 G~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~d--- 233 (410)
T PRK07103 158 GEGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRD--- 233 (410)
T ss_pred CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCC---
Confidence 46788998 9999999999999999999999999999863 1110 0000 1122
Q ss_pred ccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhc
Q 039838 243 LNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILG 322 (466)
Q Consensus 243 ~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g 322 (466)
..++||||+|+||++.+...++..-....+.......|+.. .. .|...+
T Consensus 234 -G~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~---~~----------------~p~~~~----------- 282 (410)
T PRK07103 234 -GFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANR---GP----------------DPSLEG----------- 282 (410)
T ss_pred -CeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCC---CC----------------CCCHHH-----------
Confidence 57899999999999755322111001111222222222110 00 011000
Q ss_pred ccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHH--HHcCCChhhHHHHHHhHhhcCccc
Q 039838 323 FKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIA--KNLKLGERDIEAALMTLHRFGNQS 400 (466)
Q Consensus 323 ~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~--~~Lgl~~e~~~~s~~~l~~~GNts 400 (466)
....++++++ +++ +. .+|||++..|..+...-|..+ .-.+.....+ +.-.+=..+||+.
T Consensus 283 -------------~~~a~~~Al~-~Ag-i~---~~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~-~v~s~k~~~Gh~~ 343 (410)
T PRK07103 283 -------------EMRVIRAALR-RAG-LG---PEDIDYVNPHGTGSPLGDETELAALFASGLAHA-WINATKSLTGHGL 343 (410)
T ss_pred -------------HHHHHHHHHH-HcC-CC---HHHCCEEEccCCCCCCCCHHHHHHHhcCCCCCC-eEECCCcccccCc
Confidence 0123345666 677 77 589999999998876544432 1122211111 0112225579999
Q ss_pred cchHHHHHHHH---HHcCCCC-----------------------CCCEEEEEeechhhhhcceeEE
Q 039838 401 SSSLWYELAYM---EAKERVK-----------------------KGDRVWLIGAGTGSKCGSVVLQ 440 (466)
Q Consensus 401 saSi~~~L~~~---~~~g~i~-----------------------~Gd~vllia~GsG~~~~s~v~r 440 (466)
+++-.++|... +++|.+. +-.+++.-+||.|-.-.+++++
T Consensus 344 ~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 344 SAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLE 409 (410)
T ss_pred hhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEe
Confidence 99888877543 3333321 1246677778888777777765
No 74
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.27 E-value=6.4e-10 Score=115.61 Aligned_cols=90 Identities=10% Similarity=0.033 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCC--CCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGFCP--SPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~--~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.+|+.+|++++|+++|++++|||.+|++++++.. .+..+..+++.+|+. +.+++++.+ ||+++..++..|...+++
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~~-~gasG~~al~~A~~~I~s 107 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVYV-GGATGVMTAIAGWYHVAS 107 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEec-CchhHHHHHHHHHHHHhC
Confidence 3599999999999999999999999987543322 566888999999997 588999997 899999999999999999
Q ss_pred CCCCeEEEEEeccc
Q 039838 215 QKDSDALVLSTEIL 228 (466)
Q Consensus 215 ~~~~~aLVVs~E~~ 228 (466)
|..++||||++|+.
T Consensus 108 G~ad~vLVvg~e~~ 121 (392)
T PRK06065 108 GLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCEEEEEEeecc
Confidence 99999999999984
No 75
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.27 E-value=3.2e-10 Score=119.72 Aligned_cols=93 Identities=13% Similarity=0.179 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCc-HHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPS-LSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps-~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.+|+.+|++++|+++|++++|||.+|+.+. +....+. .+.++...+|+++.+++++++. +|++++.|+..|...|++
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~-~CaSG~~Ai~~Aa~~I~s 150 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNR-QCSSGLQAVADVAAAIKA 150 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEec-cCchHHHHHHHHHHHHHc
Confidence 459999999999999999999999998653 4444444 4456667789985689999997 999999999999999999
Q ss_pred CCCCeEEEEEeccccC
Q 039838 215 QKDSDALVLSTEILST 230 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~ 230 (466)
|..+.+||++.|..|.
T Consensus 151 G~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 151 GFYDIGIGAGVESMTT 166 (452)
T ss_pred CCCCeEEEEeEEecCC
Confidence 9999999999998754
No 76
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.25 E-value=4e-10 Score=115.77 Aligned_cols=243 Identities=14% Similarity=0.150 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
+.+|+..|++++++ |++ +|||.+|+.+.... .+..+..+....|++..++++.+++ +|++++.|+..|.+++++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~~-~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTIDR-QCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehhh-hhhHHHHHHHHHHHHHHCC
Confidence 34699999999866 886 89999999653211 2445556889999986799999998 9999999999999999999
Q ss_pred CCCeEEEEEeccccCC-C----------CCC---------------CCccc-----------------------------
Q 039838 216 KDSDALVLSTEILSTG-W----------YSG---------------NEKPK----------------------------- 240 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~~-~----------~~~---------------~dr~~----------------------------- 240 (466)
..+.+|+++.|.+|.. + +.. -.|+.
T Consensus 100 ~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~ 179 (361)
T PRK06690 100 AGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN 179 (361)
T ss_pred CCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc
Confidence 9999999999998752 1 000 00000
Q ss_pred ------c-------------------------cccccccccceeEEEeecCCCcc---cCcceEeeEEeeeecCCccccc
Q 039838 241 ------L-------------------------LLNCLFRMGSVAVLLTNKKQAKR---SSKYKVVRTVRTNKAFDDKAYN 286 (466)
Q Consensus 241 ------l-------------------------~~~~lfgDGAaA~lLs~~~~~~~---~~~~~L~~~~~t~~~~d~~~~~ 286 (466)
+ ...+..+|||+|+||.+.+..++ ++.+++.. ....+.+
T Consensus 180 ~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~---~~~~~~~---- 252 (361)
T PRK06690 180 GLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVR---SAVVGVD---- 252 (361)
T ss_pred CccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEE---EEEeccC----
Confidence 0 00123367777777776442210 01111111 0000000
Q ss_pred cCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecC
Q 039838 287 SGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPV 366 (466)
Q Consensus 287 ~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~ 366 (466)
|.. ...+.....+++++ +++ +. .+|||+|.+|+
T Consensus 253 --------------------~~~----------------------~~~~~~~a~~~al~-~Ag-l~---~~Did~~ei~e 285 (361)
T PRK06690 253 --------------------PNL----------------------PGTGPIFAVNKLLN-EMN-MK---VEDIDYFEINE 285 (361)
T ss_pred --------------------ccc----------------------chhHHHHHHHHHHH-HcC-CC---HHHcCEeeecc
Confidence 000 00011223456777 778 87 58999999999
Q ss_pred CCHHHHHHHHHHcCCChhhHHHH---HHhHhhcCccccchHHHHHHHHHHcCCCCCCCE-EEEEeechhhhhcceeEEEe
Q 039838 367 SGRPVIREIAKNLKLGERDIEAA---LMTLHRFGNQSSSSLWYELAYMEAKERVKKGDR-VWLIGAGTGSKCGSVVLQCL 442 (466)
Q Consensus 367 ~~~~vl~~l~~~Lgl~~e~~~~s---~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~-vllia~GsG~~~~s~v~r~~ 442 (466)
..........+.||++++++.++ ....|.+|++|+..+.-.+..+.++| |.+ +..+..|.|. -.+++++.+
T Consensus 286 afa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~----~~~g~~~~c~~gG~-g~a~~~e~~ 360 (361)
T PRK06690 286 AFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRED----MKYGIATLGIGGGI-GLALLFEKV 360 (361)
T ss_pred hhHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhC----CCEEEEEEcccCcc-eeEEEEEec
Confidence 99999999999999998876421 22368899999999988888776532 333 2333444443 345666543
No 77
>PRK06158 thiolase; Provisional
Probab=99.24 E-value=6.4e-10 Score=115.50 Aligned_cols=85 Identities=13% Similarity=-0.029 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKD 217 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~ 217 (466)
+|+.+|++++|+++|++++|||.+|+++. +...|+ ..+++++|++ ..+.+++.. ||+++..++..|..++++|..
T Consensus 30 eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~~-g~~s~~~al~~A~~~I~sG~~ 104 (384)
T PRK06158 30 ELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTMI-GGSSFLAHLLPAALALEAGLC 104 (384)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-CeeeccccC-ccHHHHHHHHHHHHHHHcCCC
Confidence 59999999999999999999999998653 333444 5799999997 578889986 999999999999999999999
Q ss_pred CeEEEE-Eecc
Q 039838 218 SDALVL-STEI 227 (466)
Q Consensus 218 ~~aLVV-s~E~ 227 (466)
++|||+ +.|.
T Consensus 105 d~vLV~~g~~~ 115 (384)
T PRK06158 105 DVALICYGSNQ 115 (384)
T ss_pred CEEEEeecccc
Confidence 999998 4443
No 78
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.23 E-value=3.7e-10 Score=118.71 Aligned_cols=318 Identities=14% Similarity=0.121 Sum_probs=178.0
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhcccc-CCChhhHHHHHHHHHHcCCCCe--eecCCC----ccCCCCC--CCHH
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVE-TFDSESMAFMSKVLTCSGQSEE--TYLPPA----LQYIPPK--TNQQ 130 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r--~~~~~~----~~~~~~~--~~~~ 130 (466)
++|.|+|+|+..|.- .+.+++.+.+..-. .+.+-. ++ ...+...+ -.++.. +....++ .+..
T Consensus 4 ~~V~ItG~g~~~p~g---~~~~~~w~~l~~G~s~i~~~~-~~-----~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~~ 74 (424)
T PRK06333 4 KRIVVTGMGAVSPLG---CGVETFWQRLLAGQSGIRTLT-DF-----PVGDLATKIGGQVPDLAEDAEAGFDPDRYLDPK 74 (424)
T ss_pred CCEEEEcceEECCCC---CCHHHHHHHHHcCCCeEEeCC-cc-----cccCCCCceEEEeccccccccccCChhHcCCHH
Confidence 689999999999998 48899988764311 010000 00 00011111 011110 0000000 0111
Q ss_pred HHH--HHHHHHHHHHHHHHHHHcCCCcCCc-C----EEEEeec-CCC---------------------CCC-----cHHH
Q 039838 131 ESI--KEAQMVLFPVIENLLSKVQISPQDI-D----ILIINCS-GFC---------------------PSP-----SLSS 176 (466)
Q Consensus 131 ~~~--~ea~~la~~Aa~~aL~~agi~~~dI-D----~LI~~~s-~~~---------------------~~P-----s~a~ 176 (466)
+.+ .....++..|++++|+++|++++++ + .+++.++ ..+ ..| ..+.
T Consensus 75 ~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 154 (424)
T PRK06333 75 DQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAG 154 (424)
T ss_pred HHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHH
Confidence 111 1245689999999999999987766 2 3444332 110 011 2366
Q ss_pred HHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCCC----------CC------------
Q 039838 177 IIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTGW----------YS------------ 234 (466)
Q Consensus 177 ~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~----------~~------------ 234 (466)
.|...+|++ -+++.+.. +|++++.||..|.++|++|..+.+||+++|.....+ +.
T Consensus 155 ~is~~~gl~--Gp~~~v~~-aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~ 231 (424)
T PRK06333 155 HVSIRYGFK--GPLGAPVT-ACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASR 231 (424)
T ss_pred HHHHHhCCC--CCCccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCC
Confidence 788999996 57777887 999999999999999999999999999999732110 00
Q ss_pred C--CCcccccccccccccceeEEEeecCCCcccCcceEee-EEeeeecCCccccccCeeeccCCCCcceEecchhhHHHH
Q 039838 235 G--NEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVR-TVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAG 311 (466)
Q Consensus 235 ~--~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~-~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~ 311 (466)
+ .+++ ..+.||||+++||++.+...++ +.++.. +...-..+|+.+ +..+ .+. +
T Consensus 232 Pfd~~~~----G~~~gEGaa~lvLe~~~~A~~r-g~~i~a~i~G~~~~~d~~~---~~~~--------------~~~--~ 287 (424)
T PRK06333 232 PFDRDRD----GFVMGEGAGILVIETLEHALAR-GAPPLAELVGYGTSADAYH---MTAG--------------PED--G 287 (424)
T ss_pred CCCCCCC----CeEEecceEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCCC--------------CCC--c
Confidence 0 1122 4678999999999985432111 112211 111111222110 0000 000 0
Q ss_pred HHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHH-----HHHHHHcCCChhhH
Q 039838 312 ETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVI-----REIAKNLKLGERDI 386 (466)
Q Consensus 312 ~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl-----~~l~~~Lgl~~e~~ 386 (466)
+ .....++++++ +++ +. .+|||++..|..+...- ..+.+.++ ....+
T Consensus 288 ~----------------------~~~~a~~~Al~-~Ag-i~---p~dId~i~~hgtgt~~~D~~E~~al~~~fg-~~~~~ 339 (424)
T PRK06333 288 E----------------------GARRAMLIALR-QAG-IP---PEEVQHLNAHATSTPVGDLGEVAAIKKVFG-HVSGL 339 (424)
T ss_pred H----------------------HHHHHHHHHHH-HcC-CC---HHHCCEEeccCCCCccchHHHHHHHHHHhC-CCCCc
Confidence 0 01122345666 677 77 48999999998776543 34556666 21122
Q ss_pred HHHHHhHhhcCccccchHHHHHHH---HHHcCCC-------------------------CCCCEEEEEeechhhhhccee
Q 039838 387 EAALMTLHRFGNQSSSSLWYELAY---MEAKERV-------------------------KKGDRVWLIGAGTGSKCGSVV 438 (466)
Q Consensus 387 ~~s~~~l~~~GNtssaSi~~~L~~---~~~~g~i-------------------------~~Gd~vllia~GsG~~~~s~v 438 (466)
. .-.+...+||+.+++-..++.. .++.|.+ .+-++++.-+||.|-...+++
T Consensus 340 ~-v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~i 418 (424)
T PRK06333 340 A-VSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASIL 418 (424)
T ss_pred e-eECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCccccccccCCCcccCcCEEEEeeecCCCeeEEEE
Confidence 1 1234567899887775554433 3333321 123567778899988877777
Q ss_pred EEEe
Q 039838 439 LQCL 442 (466)
Q Consensus 439 ~r~~ 442 (466)
++..
T Consensus 419 l~~~ 422 (424)
T PRK06333 419 FRRW 422 (424)
T ss_pred Eecc
Confidence 7643
No 79
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.23 E-value=9e-10 Score=115.46 Aligned_cols=317 Identities=12% Similarity=0.051 Sum_probs=176.6
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccC-CChhhHHHHHHHHHHcCCCCee--ecCCCccCCCCCCCHHHHHH--
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVET-FDSESMAFMSKVLTCSGQSEET--YLPPALQYIPPKTNQQESIK-- 134 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~-~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~~~~~~~~~-- 134 (466)
++|.|+|+|+..|-- .+.+++.+.+..-.. +.+ .++ ++..++..+. .+++ ... ..-.+.++.+.
T Consensus 4 ~~VvItG~g~~~p~g---~~~~~~w~~L~~g~s~i~~-----~~~-~~~~~~~~~~~g~i~~-~~~-~~~~~~~~~~~~d 72 (414)
T PRK08722 4 RRVVVTGMGMLSPVG---NTVESSWKALLAGQSGIVN-----IEH-FDTTNFSTRFAGLVKD-FNC-EEYMSKKDARKMD 72 (414)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHhCCCeeee-----cCc-cccccCCCceeEEcCC-CCh-hHcCCHHHHhhcC
Confidence 689999999999998 588998887542110 000 000 0001111110 0111 000 00011111121
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCC-----cCEEEEeecCC-----------------C--------CCC-cHHHHHHHHcC
Q 039838 135 EAQMVLFPVIENLLSKVQISPQD-----IDILIINCSGF-----------------C--------PSP-SLSSIIINKYS 183 (466)
Q Consensus 135 ea~~la~~Aa~~aL~~agi~~~d-----ID~LI~~~s~~-----------------~--------~~P-s~a~~I~~~lG 183 (466)
....++..|+.++|+++|+++++ +++++-++... . ..| ..+.+|...+|
T Consensus 73 ~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~g 152 (414)
T PRK08722 73 LFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRG 152 (414)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhC
Confidence 13458899999999999987543 33443232110 0 112 36788999999
Q ss_pred CCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCCC----------C-----------CCCCccccc
Q 039838 184 MKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTGW----------Y-----------SGNEKPKLL 242 (466)
Q Consensus 184 l~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~----------~-----------~~~dr~~l~ 242 (466)
++ -+++.++. +|++++.||..|.++|+.|..+.+||.++|.....+ . ++-|+..
T Consensus 153 l~--Gp~~ti~~-aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~-- 227 (414)
T PRK08722 153 LR--GPNIAIST-ACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR-- 227 (414)
T ss_pred CC--CCcccccc-ccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC--
Confidence 97 47788887 999999999999999999999999999999854210 0 0001110
Q ss_pred ccccccccceeEEEeecCCCcccCcceEe-eEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhh
Q 039838 243 LNCLFRMGSVAVLLTNKKQAKRSSKYKVV-RTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITIL 321 (466)
Q Consensus 243 ~~~lfgDGAaA~lLs~~~~~~~~~~~~L~-~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~ 321 (466)
...+.|||++|+||++.+...++ +-++. .+......+|+.+ +.. |...+.
T Consensus 228 ~G~~~gEGaaalvLe~~~~A~~~-g~~i~a~i~g~~~~~d~~~---~~~----------------p~~~~~--------- 278 (414)
T PRK08722 228 DGFVLGDGAGMMVLEEYEHAKAR-GAKIYAELVGFGMSGDAYH---MTS----------------PSEDGS--------- 278 (414)
T ss_pred CceEeeceEEEEEEccHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCC----------------CCcchH---------
Confidence 25778999999999976543211 11111 1112112222110 000 100000
Q ss_pred cccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHH-----HHHHcCCC-hhhHHHHHHhHhh
Q 039838 322 GFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIRE-----IAKNLKLG-ERDIEAALMTLHR 395 (466)
Q Consensus 322 g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~-----l~~~Lgl~-~e~~~~s~~~l~~ 395 (466)
.....++++++ +++ +. .+|||++..|..+-..-|. +.+.+|-. .+++ +.-.+=..
T Consensus 279 -------------~~~~a~~~Al~-~ag-i~---~~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~-~v~s~K~~ 339 (414)
T PRK08722 279 -------------GGALAMEAAMR-DAG-VT---GEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQV-LVSSTKSM 339 (414)
T ss_pred -------------HHHHHHHHHHH-HcC-CC---HHHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCc-eeeCcccc
Confidence 01112345666 677 77 4899999999987655444 44555521 1222 11122367
Q ss_pred cCccccchHHHHHHH---HHHcCCCC-------------------------CCCEEEEEeechhhhhcceeEE
Q 039838 396 FGNQSSSSLWYELAY---MEAKERVK-------------------------KGDRVWLIGAGTGSKCGSVVLQ 440 (466)
Q Consensus 396 ~GNtssaSi~~~L~~---~~~~g~i~-------------------------~Gd~vllia~GsG~~~~s~v~r 440 (466)
+||+.+++-..++.. ++++|.+. +-++++.-+||.|-.-.+++++
T Consensus 340 ~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 412 (414)
T PRK08722 340 TGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFK 412 (414)
T ss_pred cccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCccccCCCCCEEEEecccCCCceEEEEEe
Confidence 899999988777643 33333211 1245666778888777777765
No 80
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=5.7e-10 Score=116.60 Aligned_cols=92 Identities=18% Similarity=0.240 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHc-CCCcCCcCEEEEeec-CC-CCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHh
Q 039838 137 QMVLFPVIENLLSKV-QISPQDIDILIINCS-GF-CPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 137 ~~la~~Aa~~aL~~a-gi~~~dID~LI~~~s-~~-~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
.+|+.+|++++|+++ |++|+|||.+|+++. ++ ...+..+..++..+|++ +++++.+++ +|+++..++..|.++++
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~~-~caSG~~av~~Aa~~I~ 105 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVNR-YCSSSLQTTRMAFHAIK 105 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeeec-cchhHHHHHHHHHHHHH
Confidence 459999999999996 999999999998643 22 22356678899999996 689999997 99999999999999999
Q ss_pred cCCCCeEEEEEeccccC
Q 039838 214 TQKDSDALVLSTEILST 230 (466)
Q Consensus 214 ~~~~~~aLVVs~E~~s~ 230 (466)
+|..+.+||++.|..|.
T Consensus 106 sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 106 AGEGDVFISAGVETVSR 122 (406)
T ss_pred CCCCCEEEEeeEEeccc
Confidence 99999999999997653
No 81
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.22 E-value=8.2e-10 Score=115.04 Aligned_cols=92 Identities=9% Similarity=0.022 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSG-FCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~-~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+.+|++++|+++|++++|||.+|+.+.. ....+..+..++..+|++.+++++.++. +|+++..++..|.+.+++|
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~~-~caSg~~av~~Aa~~I~sG 104 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVNK-VCASGMKAVMLAAQSIQLG 104 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEec-cchHHHHHHHHHHHHHHcC
Confidence 4599999999999999999999999986532 1213345567889999976688999997 9999999999999999999
Q ss_pred CCCeEEEEEecccc
Q 039838 216 KDSDALVLSTEILS 229 (466)
Q Consensus 216 ~~~~aLVVs~E~~s 229 (466)
..+.+||++.|..|
T Consensus 105 ~~d~vlv~G~E~~s 118 (394)
T PLN02644 105 INDVVVAGGMESMS 118 (394)
T ss_pred CCCEEEEEeEEecC
Confidence 99999999988765
No 82
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.20 E-value=5.4e-10 Score=116.07 Aligned_cols=94 Identities=13% Similarity=0.215 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
+++|+..|++++|+++|++|+|||.+++.+. ....-+..+.+++..+|++.+++++.++. +|++++.|+..|..++++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~~-~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINK-VCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhcc-hhHHHHHHHHHHHHHHHc
Confidence 4569999999999999999999999999653 22234567777889999986799999997 999999999999999999
Q ss_pred CCCCeEEEEEeccccC
Q 039838 215 QKDSDALVLSTEILST 230 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~ 230 (466)
|..+.+|+++.|..|.
T Consensus 106 G~~dvvla~G~E~ms~ 121 (392)
T PRK06633 106 GDNEIVIAGGQENMSL 121 (392)
T ss_pred CCCCEEEEcccccCCC
Confidence 9999999999998874
No 83
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=1.6e-09 Score=112.48 Aligned_cols=93 Identities=15% Similarity=0.214 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSG-FCP-SPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~-~~~-~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.+|+..|++++|+++|++|+|||.+++.+.. ... ....+..+....|++.+++++.+++ +|++++.|+..|.+.+++
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~~-~CaSG~~A~~~A~~~I~s 105 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDC-QCGSAQQANHLVAGLIAA 105 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEec-ccccHHHHHHHHHHHHHC
Confidence 4699999999999999999999999997643 222 2345667778899986799999998 999999999999999999
Q ss_pred CCCCeEEEEEeccccC
Q 039838 215 QKDSDALVLSTEILST 230 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~ 230 (466)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvla~G~E~mS~ 121 (387)
T PRK07850 106 GAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCEEEEEeEecCCC
Confidence 9999999999999875
No 84
>PRK08256 lipid-transfer protein; Provisional
Probab=99.19 E-value=9.4e-10 Score=114.51 Aligned_cols=88 Identities=17% Similarity=0.190 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+..|++++|+++|++++|||.+++.+. ++... ...+...+|++ .+++++++. +|++++.+|..|.++|++|
T Consensus 23 ~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~~v~~-~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 23 PDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIVNVNN-NCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCccccc-ccHHHHHHHHHHHHHHHCC
Confidence 359999999999999999999999988643 22211 23467789996 678899997 9999999999999999999
Q ss_pred CCCeEEEEEecccc
Q 039838 216 KDSDALVLSTEILS 229 (466)
Q Consensus 216 ~~~~aLVVs~E~~s 229 (466)
..+++||+++|..+
T Consensus 98 ~~d~vLv~g~e~~s 111 (391)
T PRK08256 98 AADCALALGFEQMQ 111 (391)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999865
No 85
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.16 E-value=2.4e-09 Score=112.67 Aligned_cols=93 Identities=16% Similarity=0.179 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC-CCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGF-CPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~-~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+..|++++|+++|++|++||.+|+.++.. ...+.++.+++..+|++..++++.++. +|++++.|+..|...+++|
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~~-aCaSG~~Ai~~Aa~~I~sG 108 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSR-ACATSFQAVANVAESIMAG 108 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeehh-hhHHHHHHHHHHHHHHHCC
Confidence 45999999999999999999999999976432 223556778999999986699999997 9999999999999999999
Q ss_pred CCCeEEEEEeccccC
Q 039838 216 KDSDALVLSTEILST 230 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~ 230 (466)
..+.+||++.|.+|.
T Consensus 109 ~~dvvLvgG~Esms~ 123 (428)
T PRK08963 109 TIDIGIAGGADSSSV 123 (428)
T ss_pred CCCEEEEecccccCC
Confidence 999999999998874
No 86
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.16 E-value=3.7e-09 Score=110.52 Aligned_cols=311 Identities=11% Similarity=0.060 Sum_probs=174.6
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhcccc-CCChhhHHHHHHHHHHcCCCCeee--cCCCccCCCCCCCHHHHHH--
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVE-TFDSESMAFMSKVLTCSGQSEETY--LPPALQYIPPKTNQQESIK-- 134 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~~--~~~~~~~~~~~~~~~~~~~-- 134 (466)
++|.|+|+|+..|-- .+.+++.+.+..-. .+.+ +.+.-...++..+.. +++ . ..+......+.+.
T Consensus 2 ~~VvITG~g~vtp~G---~~~~~~~~~L~~g~s~i~~-----~~~~~~~~~~~~~~~~~v~~-~-~~~~~~~~~~~r~~~ 71 (405)
T PRK09116 2 RRVVVTGMGGVTALG---EDWQTIAARLKAGRNAVRR-----MPEWDRYDGLNTRLAAPIDD-F-ELPAHYTRKKIRSMG 71 (405)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHcCCCCEEe-----CCchhhccCCCCceEEEecC-c-ChhHhcCHHHHhhCC
Confidence 479999999999998 58899988764311 0000 000000012222211 111 0 0000001111111
Q ss_pred HHHHHHHHHHHHHHHHcCCCc------CCcCEEEEeecCC-----------------C--------CCC-cHHHHHHHHc
Q 039838 135 EAQMVLFPVIENLLSKVQISP------QDIDILIINCSGF-----------------C--------PSP-SLSSIIINKY 182 (466)
Q Consensus 135 ea~~la~~Aa~~aL~~agi~~------~dID~LI~~~s~~-----------------~--------~~P-s~a~~I~~~l 182 (466)
-...++..|++++|+++|+.. +++++++-++... . ..| ..+..|...+
T Consensus 72 ~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (405)
T PRK09116 72 RVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFF 151 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHh
Confidence 234689999999999999832 2344443322110 0 123 2578899999
Q ss_pred CCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC----C---C-------------CC--CCccc
Q 039838 183 SMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG----W---Y-------------SG--NEKPK 240 (466)
Q Consensus 183 Gl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~----~---~-------------~~--~dr~~ 240 (466)
|++ -+++-+.+ +|++++.||..|.++|+.|..+.+||.++|..+.. + + .+ .+|+
T Consensus 152 ~~~--Gp~~ti~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~- 227 (405)
T PRK09116 152 GLK--GRVIPTSS-ACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANRD- 227 (405)
T ss_pred CCC--CCcccccc-hhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCC-
Confidence 997 47788888 99999999999999999999999999999975421 0 0 00 1222
Q ss_pred ccccccccccceeEEEeecCCCcccCcceEee-EEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHh
Q 039838 241 LLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVR-TVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANIT 319 (466)
Q Consensus 241 l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~-~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~ 319 (466)
..+.|+||++++|++.+....+ +-++.. +......+|+.+ ... |.. +
T Consensus 228 ---G~v~gEGa~~~vLe~~~~A~~r-ga~i~a~i~g~~~~~d~~~---~~~----------------p~~--~------- 275 (405)
T PRK09116 228 ---GLVIGEGAGTLVLEELEHAKAR-GATIYAEIVGFGTNSDGAH---VTQ----------------PQA--E------- 275 (405)
T ss_pred ---CEeeeccEEEEEEccHHHHHhC-CCceEEEEEEEEEcCCCCc---CCC----------------CCH--H-------
Confidence 5788999999999975432111 111111 111112222110 000 100 0
Q ss_pred hhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHH-----HHHHHHHcCCChhhHHHHHHhHh
Q 039838 320 ILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPV-----IREIAKNLKLGERDIEAALMTLH 394 (466)
Q Consensus 320 ~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~v-----l~~l~~~Lgl~~e~~~~s~~~l~ 394 (466)
.....++++|+ +++ +. .+|||++..|..+-.. ...+.+.+|-. -.+ ..+=.
T Consensus 276 ---------------~~~~ai~~AL~-~Ag-i~---p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~~-~pv---~s~K~ 331 (405)
T PRK09116 276 ---------------TMQIAMELALK-DAG-LA---PEDIGYVNAHGTATDRGDIAESQATAAVFGAR-MPI---SSLKS 331 (405)
T ss_pred ---------------HHHHHHHHHHH-HhC-CC---HHHcCEEECcCccCCCCCHHHHHHHHHHhCCC-Cee---ECcch
Confidence 00112345666 667 77 5899999999866533 34455666521 111 23335
Q ss_pred hcCccccchHHHHHHH---HHHcCCC-------------------------CCCCEEEEEeechhhhhcceeEE
Q 039838 395 RFGNQSSSSLWYELAY---MEAKERV-------------------------KKGDRVWLIGAGTGSKCGSVVLQ 440 (466)
Q Consensus 395 ~~GNtssaSi~~~L~~---~~~~g~i-------------------------~~Gd~vllia~GsG~~~~s~v~r 440 (466)
.+||+..++-.+++.. .+++|.+ .+.+.++..+||-|-.-.+++++
T Consensus 332 ~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 332 YFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred hhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 6899977776655543 2223221 12356788899999887777764
No 87
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.15 E-value=5.4e-09 Score=109.37 Aligned_cols=309 Identities=12% Similarity=0.066 Sum_probs=175.8
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccC-CChhhHHHHHHHHHHcCCCCee--ecCCCccCCCCC--CCHHHHH-
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVET-FDSESMAFMSKVLTCSGQSEET--YLPPALQYIPPK--TNQQESI- 133 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~-~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~--~~~~~~~- 133 (466)
++|.|+++|+..|-- .+.+++.+.+..-.. ..+ +.+ +...+...+. .++. . .|+ .+....+
T Consensus 2 ~~v~ItG~g~vsp~G---~~~~~~~~~L~~G~s~i~~-----~~~-~~~~~~~~~~~g~i~~-f---~~~~~~~~~~~~~ 68 (406)
T PRK08439 2 KRVVVTGIGMINSLG---LNKESSFKAICNGECGIKK-----ITL-FDASDFPVQIAGEITD-F---DPTEVMDPKEVKK 68 (406)
T ss_pred CCEEEEeeEEECCCc---CCHHHHHHHHHcCCCceEe-----CCC-ccccCCCCceeEEcCC-c---ChhhcCCHHHHhh
Confidence 579999999999999 588998887643210 000 000 0001111110 0010 0 000 0111111
Q ss_pred -HHHHHHHHHHHHHHHHHcCCCcCCcCE----EEEeecC-C-------------------------CCCC-cHHHHHHHH
Q 039838 134 -KEAQMVLFPVIENLLSKVQISPQDIDI----LIINCSG-F-------------------------CPSP-SLSSIIINK 181 (466)
Q Consensus 134 -~ea~~la~~Aa~~aL~~agi~~~dID~----LI~~~s~-~-------------------------~~~P-s~a~~I~~~ 181 (466)
.....++..|++++|+++|++++++|. +++.++. . ...| ..+..|...
T Consensus 69 ~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 148 (406)
T PRK08439 69 ADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIE 148 (406)
T ss_pred cCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHH
Confidence 224679999999999999999877763 3332211 0 0112 467889999
Q ss_pred cCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccc-cCC---------------------CCCC-CCc
Q 039838 182 YSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEIL-STG---------------------WYSG-NEK 238 (466)
Q Consensus 182 lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~-s~~---------------------~~~~-~dr 238 (466)
+|++ -+++.+.+ +|++++.||..|.++|++|..+.+||+++|.. +.. ..+. .++
T Consensus 149 ~gl~--Gp~~~~~~-acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~ 225 (406)
T PRK08439 149 HGLK--GPNLSSVT-ACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDR 225 (406)
T ss_pred hCCC--CCcccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCC
Confidence 9997 46677776 99999999999999999999999999999963 210 0000 122
Q ss_pred ccccccccccccceeEEEeecCCCcccCcceEeeEE-eeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHh
Q 039838 239 PKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTV-RTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRAN 317 (466)
Q Consensus 239 ~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~-~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~ 317 (466)
+ ..++|+||+++||++.+.... .+-++...+ ......|. +. + . .|...
T Consensus 226 ~----G~v~gEGa~~lvLe~~~~A~~-rg~~i~a~i~g~~~~~d~--~~-~--------------~--~p~~~------- 274 (406)
T PRK08439 226 D----GFVMGEGAGALVLEEYESAKK-RGAKIYAEIIGFGESGDA--NH-I--------------T--SPAPE------- 274 (406)
T ss_pred C----cEEeeCceEEEEEccHHHHHH-CCCeEEEEEEeEEccCCC--CC-C--------------C--CCCHH-------
Confidence 2 578999999999997543221 111222111 11111111 00 0 0 01100
Q ss_pred HhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHH-----HHHHcCCChhhHHHHHHh
Q 039838 318 ITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIRE-----IAKNLKLGERDIEAALMT 392 (466)
Q Consensus 318 i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~-----l~~~Lgl~~e~~~~s~~~ 392 (466)
.....+++.++ +++ .+|||++..|..+-...|. +.+.++-..... +...+
T Consensus 275 -----------------~~~~a~~~al~-~ag------~~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~-~v~s~ 329 (406)
T PRK08439 275 -----------------GPLRAMKAALE-MAG------NPKIDYINAHGTSTPYNDKNETAALKELFGSKEKVP-PVSST 329 (406)
T ss_pred -----------------HHHHHHHHHHH-HcC------CCccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCC-eEECc
Confidence 01122345566 556 2689999999987655443 445555322111 00122
Q ss_pred HhhcCccccchHHHHHHH---HHHcCCCC------------------------CCCEEEEEeechhhhhcceeEE
Q 039838 393 LHRFGNQSSSSLWYELAY---MEAKERVK------------------------KGDRVWLIGAGTGSKCGSVVLQ 440 (466)
Q Consensus 393 l~~~GNtssaSi~~~L~~---~~~~g~i~------------------------~Gd~vllia~GsG~~~~s~v~r 440 (466)
=..+||+.+++-.+++.. ++++|.+. +-+.++.-+||.|-.-.+++++
T Consensus 330 K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~ 404 (406)
T PRK08439 330 KGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFK 404 (406)
T ss_pred ccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCCCccccCCCCEEEEeeecCCCceEEEEEe
Confidence 356899999987776643 23333221 2245777889999888888876
No 88
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.15 E-value=4.6e-09 Score=109.20 Aligned_cols=94 Identities=12% Similarity=0.226 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHh
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINCSG-FCP-SPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~s~-~~~-~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
+.+|+..|++++|+++|++++|||.+|+.+.. ... .+..+..+.-.-|++.+++++.++. +|++|+.|+..|.+.++
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~~-~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSIDR-QCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEec-hhhHHHHHHHHHHHHHH
Confidence 34699999999999999999999999997542 111 2445555445558866899999998 99999999999999999
Q ss_pred cCCCCeEEEEEeccccC
Q 039838 214 TQKDSDALVLSTEILST 230 (466)
Q Consensus 214 ~~~~~~aLVVs~E~~s~ 230 (466)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999998874
No 89
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.15 E-value=5.2e-09 Score=108.49 Aligned_cols=295 Identities=12% Similarity=0.115 Sum_probs=174.2
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeeec---CC---CccCCCCCCCHHHHH
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETYL---PP---ALQYIPPKTNQQESI 133 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~---~~---~~~~~~~~~~~~~~~ 133 (466)
++|.|+|+|..-|-. . .+++.+.+..- ++||+.-+-+ +. ......+ ..
T Consensus 2 ~rVvITG~G~vsp~G---~-~~~~~~~l~~G----------------~sgi~~~~~~~~~~~~~~~~~~~~~-~~----- 55 (381)
T PRK05952 2 MKVVVTGIGLVSALG---D-LEQSWQRLLQG----------------KSGIKLHQPFPELPPLPLGLIGNQP-SS----- 55 (381)
T ss_pred CeEEEEeeEEECccc---C-HHHHHHHHHcC----------------CCCeEeCCcccccccccceeecccc-cc-----
Confidence 469999999999998 5 78887765321 2333211000 00 0000001 01
Q ss_pred HHHHHHHHHHHHHHHHHcCCCc--CCcCEEEEeecCC--------------------C--------CCC-cHHHHHHHHc
Q 039838 134 KEAQMVLFPVIENLLSKVQISP--QDIDILIINCSGF--------------------C--------PSP-SLSSIIINKY 182 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~--~dID~LI~~~s~~--------------------~--------~~P-s~a~~I~~~l 182 (466)
...++..|+++||+++|+++ +++++++-++... . ..| ..+..|...+
T Consensus 56 --~~~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~ 133 (381)
T PRK05952 56 --LEDLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQI 133 (381)
T ss_pred --ccHHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHh
Confidence 11255688999999999864 5566555332110 0 122 2467789999
Q ss_pred CCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc-ccCC---------------CCCC-CCcccccccc
Q 039838 183 SMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEI-LSTG---------------WYSG-NEKPKLLLNC 245 (466)
Q Consensus 183 Gl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~-~s~~---------------~~~~-~dr~~l~~~~ 245 (466)
|++ -+++.+.+ +|++++.||..|.++|+.+..+.+||.++|. .+.. ..+. .+|+ ..
T Consensus 134 ~~~--Gp~~ti~~-aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~----G~ 206 (381)
T PRK05952 134 GTQ--GPVLAPMA-ACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQRE----GL 206 (381)
T ss_pred CCC--Cccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCC----Cc
Confidence 997 47888888 9999999999999999999999999999996 3321 0011 1232 57
Q ss_pred cccccceeEEEeecCCCcccCcceEe-eEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhccc
Q 039838 246 LFRMGSVAVLLTNKKQAKRSSKYKVV-RTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILGFK 324 (466)
Q Consensus 246 lfgDGAaA~lLs~~~~~~~~~~~~L~-~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g~~ 324 (466)
++||||++++|++.+...++. -++. .+......+|+... .. |...++
T Consensus 207 v~gEGaa~lvLe~~~~A~~rg-~~i~a~I~g~~~~~d~~~~---~~----------------~~~~~~------------ 254 (381)
T PRK05952 207 VLGEGGAILVLESAELAQKRG-AKIYGQILGFGLTCDAYHM---SA----------------PEPDGK------------ 254 (381)
T ss_pred cccccEEEEEEeeHHHHHhCC-CceEEEEEEEEecCCCCCC---CC----------------CCCCHH------------
Confidence 899999999999864322111 1111 11111122222110 00 100011
Q ss_pred ccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHH-----HHHHcCCChhhHHHHHHhHhhcCcc
Q 039838 325 ILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIRE-----IAKNLKLGERDIEAALMTLHRFGNQ 399 (466)
Q Consensus 325 vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~-----l~~~Lgl~~e~~~~s~~~l~~~GNt 399 (466)
.....++++|+ +++ +. .+|||++..|..+...-|. +.+.++- ++ +...+=..+||+
T Consensus 255 ----------~~~~ai~~Al~-~ag-i~---p~dId~i~~hgtgt~~~D~~E~~al~~~fg~---~~-~v~s~K~~~GH~ 315 (381)
T PRK05952 255 ----------SAIAAIQQCLA-RSG-LT---PEDIDYIHAHGTATRLNDQREANLIQALFPH---RV-AVSSTKGATGHT 315 (381)
T ss_pred ----------HHHHHHHHHHH-HhC-CC---HHHeeEEEccCCCCCCCcHHHHHHHHHHcCC---CC-eeecchhhhccC
Confidence 01122345666 677 77 4899999999887665544 3444441 22 112333678999
Q ss_pred ccchHHHHHHHH---HHcCCCCC---------------------CCEEEEEeechhhhhcceeEE
Q 039838 400 SSSSLWYELAYM---EAKERVKK---------------------GDRVWLIGAGTGSKCGSVVLQ 440 (466)
Q Consensus 400 ssaSi~~~L~~~---~~~g~i~~---------------------Gd~vllia~GsG~~~~s~v~r 440 (466)
.+++-.+++... +++|.+.| =++++..+||.|-.-.+++++
T Consensus 316 ~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 316 LGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred hHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 999987777653 44444322 256788889988877777765
No 90
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.10 E-value=2e-08 Score=104.57 Aligned_cols=206 Identities=15% Similarity=0.054 Sum_probs=129.9
Q ss_pred CcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCCC---------------CCC-
Q 039838 172 PSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTGW---------------YSG- 235 (466)
Q Consensus 172 Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~---------------~~~- 235 (466)
+..+..|+..+|++ -+++.+.. +|++++.||..|.++|++|..+.+||+++|..+... .+.
T Consensus 137 ~~~a~~ia~~lgl~--Gp~~~i~~-acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLS--GPAYTIST-ACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCC--CCcccccC-hhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 45788999999997 37888887 999999999999999999999999999999644310 011
Q ss_pred CCcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHH
Q 039838 236 NEKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLR 315 (466)
Q Consensus 236 ~dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~ 315 (466)
.+++ ..++|||++++||++.... .-++.+. -...|... ...+ .|. ++.
T Consensus 214 ~~~~----G~~~gEGaa~vVLe~~~~~----~~~I~g~---g~~~d~~~---~~~~--------------~~~--~~~-- 261 (392)
T PRK09185 214 ANRD----GINIGEAAAFFLLEREDDA----AVALLGV---GESSDAHH---MSAP--------------HPE--GLG-- 261 (392)
T ss_pred CCCC----ccceeceEEEEEEEEcCCC----cEEEEEE---EEeCCCCC---CCCC--------------CCC--HHH--
Confidence 1222 5789999999999987322 1223221 11222211 0000 010 000
Q ss_pred HhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHH-----HHHHcCCChhhHHHHH
Q 039838 316 ANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIRE-----IAKNLKLGERDIEAAL 390 (466)
Q Consensus 316 ~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~-----l~~~Lgl~~e~~~~s~ 390 (466)
.....+++++ +++ +. .+|||++..|..+...-|. +.+.++-.. .+ -
T Consensus 262 --------------------~~~a~~~Al~-~Ag-l~---~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv---~ 312 (392)
T PRK09185 262 --------------------AILAMQQALA-DAG-LA---PADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PC---S 312 (392)
T ss_pred --------------------HHHHHHHHHH-HcC-CC---HHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-ce---e
Confidence 0112345666 667 77 5899999999987654333 444454211 11 1
Q ss_pred HhHhhcCccccchHHHHHHHHH---HcCCCC------------------------CCCEEEEEeechhhhhcceeEEE
Q 039838 391 MTLHRFGNQSSSSLWYELAYME---AKERVK------------------------KGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 391 ~~l~~~GNtssaSi~~~L~~~~---~~g~i~------------------------~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
.+=..+||+.+++-.+++.... ++|.+. +-++++.-+||.|-.-.+++++.
T Consensus 313 s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 313 STKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred CCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 2225579999998777775432 333211 13567888899988888887763
No 91
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.09 E-value=2.9e-08 Score=106.97 Aligned_cols=313 Identities=12% Similarity=0.083 Sum_probs=176.3
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhcccc-CCChhhHHHHHHHHHHcCCCCee--ecCCCccCCCCC--CCHHHHH-
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVE-TFDSESMAFMSKVLTCSGQSEET--YLPPALQYIPPK--TNQQESI- 133 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~--~~~~~~~- 133 (466)
++|.|+|+|+..|-- .+.+++.+.+..-. .+.+ ++++ ....+..+. .++. ..++ .+..+.+
T Consensus 129 ~rVvITG~G~vtp~G---~~~~~~w~~L~~G~s~i~~-----~~~f-~~~~~~~~~ag~i~~----f~~~~~l~~k~~r~ 195 (540)
T PLN02787 129 RRVVVTGMGVVSPLG---HDPDVFYNNLLEGVSGISE-----IERF-DCSQFPTRIAGEIKS----FSTDGWVAPKLSKR 195 (540)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHcCCCcccc-----cCcc-chhhCCccccccccc----cChhhcCCHHHHHh
Confidence 579999999999998 48899988764311 0110 0000 000111110 0000 0000 1111111
Q ss_pred -HHHHHHHHHHHHHHHHHcCCCcC--------CcCEEEEeecCC------------------CC------CC-cHHHHHH
Q 039838 134 -KEAQMVLFPVIENLLSKVQISPQ--------DIDILIINCSGF------------------CP------SP-SLSSIII 179 (466)
Q Consensus 134 -~ea~~la~~Aa~~aL~~agi~~~--------dID~LI~~~s~~------------------~~------~P-s~a~~I~ 179 (466)
.....++..|++++|+++|++++ ++++++-++... .+ .+ ..+.+|.
T Consensus 196 md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia 275 (540)
T PLN02787 196 MDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLA 275 (540)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHH
Confidence 12346889999999999998764 233433232111 00 11 2457889
Q ss_pred HHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC-----------C-----------CCC-C
Q 039838 180 NKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG-----------W-----------YSG-N 236 (466)
Q Consensus 180 ~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~-----------~-----------~~~-~ 236 (466)
..+|++ -+++.+.+ +|++++.||..|.++|+.|..+.+||.++|..... + .+. .
T Consensus 276 ~~~gl~--Gp~~tist-ACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~ 352 (540)
T PLN02787 276 MDLGWM--GPNYSIST-ACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDM 352 (540)
T ss_pred HHhCCC--CCcccccc-ccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCccc
Confidence 999997 57888888 99999999999999999999999999999962110 0 000 1
Q ss_pred CcccccccccccccceeEEEeecCCCcccCcceEeeEE-eeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHH
Q 039838 237 EKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTV-RTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLR 315 (466)
Q Consensus 237 dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~-~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~ 315 (466)
+|+ ..++|+||+++||++.+...++ +-++...+ ......|+ +. +.. |...+..
T Consensus 353 ~rd----Gfv~GEGAa~lVLE~~e~A~~r-Ga~IyA~I~G~g~s~Da--~~-~t~----------------p~p~g~g-- 406 (540)
T PLN02787 353 NRD----GFVMGEGAGVLLLEELEHAKKR-GANIYAEFLGGSFTCDA--YH-MTE----------------PHPEGAG-- 406 (540)
T ss_pred CCC----CcccccceEEEEEeeHHHHHHC-CCeeEEEEEEEEEecCC--CC-CCC----------------CCcCHHH--
Confidence 223 5789999999999975432111 11222111 11122222 10 110 1110110
Q ss_pred HhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHH-----HHHHHcCCChhhHHHHH
Q 039838 316 ANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIR-----EIAKNLKLGERDIEAAL 390 (466)
Q Consensus 316 ~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~-----~l~~~Lgl~~e~~~~s~ 390 (466)
....+++.|+ +++ +. ++|||++..|..+-..-| .+.+.+|-.+ .+ +.-
T Consensus 407 --------------------~~~am~~AL~-~AG-l~---p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~-~~-pV~ 459 (540)
T PLN02787 407 --------------------VILCIEKALA-QSG-VS---KEDVNYINAHATSTKAGDLKEYQALMRCFGQNP-EL-RVN 459 (540)
T ss_pred --------------------HHHHHHHHHH-HcC-CC---HHHCcEEEccCccCCCCCHHHHHHHHHHhCCCC-Cc-eee
Confidence 1112345666 677 87 589999999998765543 3445565321 11 001
Q ss_pred HhHhhcCccccchHHHHHHH---HHHcCCCC-------------------------CCCEEEEEeechhhhhcceeEEE
Q 039838 391 MTLHRFGNQSSSSLWYELAY---MEAKERVK-------------------------KGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 391 ~~l~~~GNtssaSi~~~L~~---~~~~g~i~-------------------------~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
.+=..+||+.+++-.+++.. ++++|.+. +-+.++.-+||-|-.-.+++++-
T Consensus 460 S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~ 538 (540)
T PLN02787 460 STKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAP 538 (540)
T ss_pred CCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEEe
Confidence 23356899998887666654 33444321 12445667888888877777764
No 92
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.08 E-value=2.3e-08 Score=105.69 Aligned_cols=119 Identities=12% Similarity=0.041 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcC-----CcCEEEEeecC-CC-----------------C--------CC-cHHHHHHHHcC
Q 039838 136 AQMVLFPVIENLLSKVQISPQ-----DIDILIINCSG-FC-----------------P--------SP-SLSSIIINKYS 183 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~-----dID~LI~~~s~-~~-----------------~--------~P-s~a~~I~~~lG 183 (466)
...++..|+.++|+++|+++. +.+.+++.++. .. . .+ ..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 446899999999999998542 34556665321 10 0 11 24668999999
Q ss_pred CCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC-----------C-----------CCC--CCcc
Q 039838 184 MKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG-----------W-----------YSG--NEKP 239 (466)
Q Consensus 184 l~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~-----------~-----------~~~--~dr~ 239 (466)
++ -+++.+.+ +|++++.||..|.++|++|..+.+||.++|..... + .++ .++
T Consensus 173 l~--Gp~~tv~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQ--GPNHAAVT-ACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CC--CceeceeC-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 86 57888888 99999999999999999999999999998863210 0 000 112
Q ss_pred cccccccccccceeEEEeecCC
Q 039838 240 KLLLNCLFRMGSVAVLLTNKKQ 261 (466)
Q Consensus 240 ~l~~~~lfgDGAaA~lLs~~~~ 261 (466)
..++.||||+|+||++.+.
T Consensus 249 ---~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 ---DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred ---CCeeeecCEEEEEEeeHHH
Confidence 2578899999999998653
No 93
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.07 E-value=1.7e-08 Score=105.49 Aligned_cols=279 Identities=9% Similarity=0.065 Sum_probs=157.1
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhcccc-CCChhhHHHHHHHHHHcCCCCee--ecCCCccCCCCCCCHHHHH--H
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVE-TFDSESMAFMSKVLTCSGQSEET--YLPPALQYIPPKTNQQESI--K 134 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~~~~~~~~--~ 134 (466)
++|.|+|+|+..|-- .+.+++.+.+..-. .+.+- ++ +...+...+. .+++ ... ....+....+ .
T Consensus 1 ~~VvItG~G~vsp~G---~~~~~~w~~L~~G~s~i~~~-----~~-~~~~~~~~~~~g~i~~-~~~-~~~~~~~~~~~~d 69 (399)
T cd00832 1 RRAVVTGIGVVAPNG---LGVEEYWKAVLDGRSGLGPI-----TR-FDPSGYPARLAGEVPD-FDA-AEHLPGRLLPQTD 69 (399)
T ss_pred CCEEEEeeEEeCCCC---CCHHHHHHHHHhCCCeEeeC-----Cc-cccccCCCceeEEeCC-cCh-hhcCCHHHHhhCC
Confidence 469999999999998 48899988764311 01000 00 0001111110 0110 000 0001111111 1
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCC-----cCEEEEeecCC-----------------CCCC---------cHHHHHHHHcC
Q 039838 135 EAQMVLFPVIENLLSKVQISPQD-----IDILIINCSGF-----------------CPSP---------SLSSIIINKYS 183 (466)
Q Consensus 135 ea~~la~~Aa~~aL~~agi~~~d-----ID~LI~~~s~~-----------------~~~P---------s~a~~I~~~lG 183 (466)
-...++..|++++|+++|+++++ +++++-++... ...| ..+..|...+|
T Consensus 70 ~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (399)
T cd00832 70 RMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHG 149 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhC
Confidence 24568999999999999998754 33433222111 0011 24678999999
Q ss_pred CCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC---------------------CCCC-CCcccc
Q 039838 184 MKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG---------------------WYSG-NEKPKL 241 (466)
Q Consensus 184 l~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~---------------------~~~~-~dr~~l 241 (466)
++ -+++-+.+ +|++++.||..|.++|+.+. +.+||.+.|..... ..+. .+++
T Consensus 150 l~--Gp~~ti~~-acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~-- 223 (399)
T cd00832 150 MR--GPSGVVVA-EQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAA-- 223 (399)
T ss_pred CC--CCcccccc-hhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCC--
Confidence 97 47777887 99999999999999999999 99999999873211 0000 1122
Q ss_pred cccccccccceeEEEeecCCCcccCcceEeeEE-eeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhh
Q 039838 242 LLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTV-RTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITI 320 (466)
Q Consensus 242 ~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~-~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~ 320 (466)
..+.|+|+++++|++.+...++ +-++...+ ......|+.. .. +. ++
T Consensus 224 --G~~~gEGa~~lvLe~~~~A~~r-g~~i~a~i~g~~~~~d~~~-----------------~~---~~--~~-------- 270 (399)
T cd00832 224 --GYVPGEGGAILVLEDAAAARER-GARVYGEIAGYAATFDPPP-----------------GS---GR--PP-------- 270 (399)
T ss_pred --CEeeeceEEEEEEeeHHHHHHC-CCeEEEEEEeEEEcCCCCC-----------------CC---CC--HH--------
Confidence 5789999999999986543211 11222111 1111111110 00 00 01
Q ss_pred hcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHH-----HHHHHHcCCChhhHHHHHHhHhh
Q 039838 321 LGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVI-----REIAKNLKLGERDIEAALMTLHR 395 (466)
Q Consensus 321 ~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl-----~~l~~~Lgl~~e~~~~s~~~l~~ 395 (466)
+....+++.|+ +++ +. .+|||++..|..+.... +.+.+.+|-. ++ +...+=..
T Consensus 271 --------------~~~~a~~~al~-~ag-~~---~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~--~~-pv~s~K~~ 328 (399)
T cd00832 271 --------------GLARAIRLALA-DAG-LT---PEDVDVVFADAAGVPELDRAEAAALAAVFGPR--GV-PVTAPKTM 328 (399)
T ss_pred --------------HHHHHHHHHHH-HcC-CC---HHHccEEEeccCcCCCCCHHHHHHHHHHhCCC--CC-ceeCCCch
Confidence 11123345666 667 77 58999999998775443 3355556532 11 11223356
Q ss_pred cCccccchHHHHHHH
Q 039838 396 FGNQSSSSLWYELAY 410 (466)
Q Consensus 396 ~GNtssaSi~~~L~~ 410 (466)
+||+.+++-.+++..
T Consensus 329 ~Gh~~~aaG~~~l~~ 343 (399)
T cd00832 329 TGRLYAGGAPLDVAT 343 (399)
T ss_pred hcchHHHHHHHHHHH
Confidence 799999988888865
No 94
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.06 E-value=3.9e-08 Score=103.31 Aligned_cols=316 Identities=10% Similarity=0.016 Sum_probs=179.9
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhcccc-CCChhhHHHHHHHHHHcCCCCee--ecCCCccCCCCCCCHHHHHH--
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVE-TFDSESMAFMSKVLTCSGQSEET--YLPPALQYIPPKTNQQESIK-- 134 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~~~~~~~~~-- 134 (466)
++|-|+|+|+..|-- .+.++|.+.+..-. ...+-.. + -....++..+. .++.+. .+..+..+.+.
T Consensus 12 ~~VvItGig~~sp~g---~~~~~~w~~L~~G~s~i~~~~~-~---~~~~~~~~~~~~g~i~~~~---d~~~~~~~~~~~d 81 (418)
T PRK07910 12 PNVVVTGIAMTTALA---TDAETTWKLLLDGQSGIRTLDD-P---FVEEFDLPVRIGGHLLEEF---DHQLTRVELRRMS 81 (418)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHcCCCeeEeCCh-h---hhhccCCCcceEEEeccCc---cccCCHHHHhhcc
Confidence 589999999999998 58999998764311 0110000 0 01112222221 122111 11112222222
Q ss_pred HHHHHHHHHHHHHHHHcCC---CcCCcCEEEEeecCCC-------------------------CCC-cHHHHHHHHcCCC
Q 039838 135 EAQMVLFPVIENLLSKVQI---SPQDIDILIINCSGFC-------------------------PSP-SLSSIIINKYSMK 185 (466)
Q Consensus 135 ea~~la~~Aa~~aL~~agi---~~~dID~LI~~~s~~~-------------------------~~P-s~a~~I~~~lGl~ 185 (466)
-...++..|++++|+++|+ +++++++++-++.... ..| ..+..+...+|++
T Consensus 82 ~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~ 161 (418)
T PRK07910 82 YLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK 161 (418)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC
Confidence 2445889999999999996 5556665554321110 012 2456778888887
Q ss_pred CCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC-----C------CC-----CC------Ccccccc
Q 039838 186 SDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG-----W------YS-----GN------EKPKLLL 243 (466)
Q Consensus 186 ~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~-----~------~~-----~~------dr~~l~~ 243 (466)
. .++.+.+ +|++++.||..|.++|+.|..+.++|.++|..... + .. .. |+. -.
T Consensus 162 G--~~~ti~t-aCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~--~~ 236 (418)
T PRK07910 162 A--GVITPVS-ACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKD--RD 236 (418)
T ss_pred C--Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCC--CC
Confidence 3 5677777 99999999999999999999999999999974211 0 00 00 111 02
Q ss_pred cccccccceeEEEeecCCCcccCcceEe-eEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhhc
Q 039838 244 NCLFRMGSVAVLLTNKKQAKRSSKYKVV-RTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITILG 322 (466)
Q Consensus 244 ~~lfgDGAaA~lLs~~~~~~~~~~~~L~-~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~g 322 (466)
..++|+|++++||++.+...++ +.++. .+......+|+.+. .. |...+.
T Consensus 237 G~v~gEGaa~vvLe~~~~A~~r-g~~i~a~i~g~~~~~dg~~~---~~----------------~~~~~~---------- 286 (418)
T PRK07910 237 GFVFGEGGALMVIETEEHAKAR-GANILARIMGASITSDGFHM---VA----------------PDPNGE---------- 286 (418)
T ss_pred CEeeeceEEEEEEeeHHHHHhC-CCcEEEEEEEEEEecCCCCC---CC----------------CCCCHH----------
Confidence 6789999999999986543211 11221 12222223332210 00 000000
Q ss_pred ccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHH-----HHHHHHcCCChhhHHHHHHhHhhcC
Q 039838 323 FKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVI-----REIAKNLKLGERDIEAALMTLHRFG 397 (466)
Q Consensus 323 ~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl-----~~l~~~Lgl~~e~~~~s~~~l~~~G 397 (466)
.....++++|+ +++ +. .+|||++..|..+...- +.+.+.+|-..-.+ ..+=..+|
T Consensus 287 ------------~~~~a~~~Al~-~ag-i~---~~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v---~s~K~~~G 346 (418)
T PRK07910 287 ------------RAGHAMTRAIE-LAG-LT---PGDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAV---YAPKSALG 346 (418)
T ss_pred ------------HHHHHHHHHHH-HhC-CC---HHHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCce---eCcccccc
Confidence 01123455666 677 77 58999999999876543 44566666321112 23346789
Q ss_pred ccccchHHHHHHH---HHHcCCCC----------------------C--CCEEEEEeechhhhhcceeEE
Q 039838 398 NQSSSSLWYELAY---MEAKERVK----------------------K--GDRVWLIGAGTGSKCGSVVLQ 440 (466)
Q Consensus 398 NtssaSi~~~L~~---~~~~g~i~----------------------~--Gd~vllia~GsG~~~~s~v~r 440 (466)
|+.+++-.++|.. ++++|.+. + -++++.-+||.|-+-.+++++
T Consensus 347 H~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~ 416 (418)
T PRK07910 347 HSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFG 416 (418)
T ss_pred ccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEe
Confidence 9999987777543 23333321 1 135666778888777777765
No 95
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.05 E-value=1e-08 Score=107.86 Aligned_cols=250 Identities=14% Similarity=0.085 Sum_probs=151.2
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCCcCE----EEEeec-CCC-----------------C--------CC-cHHHHHHHHcC
Q 039838 136 AQMVLFPVIENLLSKVQIS-PQDIDI----LIINCS-GFC-----------------P--------SP-SLSSIIINKYS 183 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~-~~dID~----LI~~~s-~~~-----------------~--------~P-s~a~~I~~~lG 183 (466)
..+++..|++++|+++|++ +++++. +++.++ ... . ++ ..+..|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 3469999999999999998 666553 233221 110 0 11 24667888899
Q ss_pred CCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC---------------CC---------CCCCcc
Q 039838 184 MKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG---------------WY---------SGNEKP 239 (466)
Q Consensus 184 l~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~---------------~~---------~~~dr~ 239 (466)
++ -+++.+.+ +|++++.||..|.++|++|..+.+||.++|..... +. ...++
T Consensus 157 l~--Gp~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~- 232 (421)
T PTZ00050 157 LK--GPSGSAVT-ACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR- 232 (421)
T ss_pred CC--Cccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC-
Confidence 97 47788887 99999999999999999999999999999963211 00 00122
Q ss_pred cccccccccccceeEEEeecCCCcccCcceEee-EEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhH
Q 039838 240 KLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVR-TVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANI 318 (466)
Q Consensus 240 ~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~-~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i 318 (466)
...+.||||+|+||++.+...++ +-++.. +.......|+.+ ... |...++
T Consensus 233 ---~G~~~gEGAaalvLe~~~~A~~~-g~~i~a~i~g~~~~~d~~~---~~~----------------p~~~~~------ 283 (421)
T PTZ00050 233 ---AGFVMGEGAGILVLEELEHALRR-GAKIYAEIRGYGSSSDAHH---ITA----------------PHPDGR------ 283 (421)
T ss_pred ---CCEeeccceEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCC----------------CCCChH------
Confidence 25688999999999986543211 112211 111111222110 000 100000
Q ss_pred hhhcccccchhHHHHHHHHHHHHhhhhcc-CCCCCCCccccccEEEecCCCHHHH-----HHHHHHcCCCh-hhHHHHHH
Q 039838 319 TILGFKILPFRELFWLGVSVIKKGFIKNS-CDVYVPNFKAAVQHFCLPVSGRPVI-----REIAKNLKLGE-RDIEAALM 391 (466)
Q Consensus 319 ~~~g~~vl~~~e~~~~~~~~v~~~~l~~~-~~~~~pd~~~did~~~~H~~~~~vl-----~~l~~~Lgl~~-e~~~~s~~ 391 (466)
+....++++|+ + ++ +. .+|||++.+|..+...- +.+.+.++-.. +.+. .-.
T Consensus 284 ----------------~~~~ai~~Al~-~~Ag-i~---~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~-v~s 341 (421)
T PTZ00050 284 ----------------GARRCMENALK-DGAN-IN---INDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLY-VSS 341 (421)
T ss_pred ----------------HHHHHHHHHHH-hccC-CC---hhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCce-EEC
Confidence 11123456666 6 77 87 48999999998877443 33444454321 1110 012
Q ss_pred hHhhcCccccchHHHHHHHH---HHcCCCC--------------------------CCCEEEEEeechhhhhcceeEE
Q 039838 392 TLHRFGNQSSSSLWYELAYM---EAKERVK--------------------------KGDRVWLIGAGTGSKCGSVVLQ 440 (466)
Q Consensus 392 ~l~~~GNtssaSi~~~L~~~---~~~g~i~--------------------------~Gd~vllia~GsG~~~~s~v~r 440 (466)
+=..+||+.+++-.++|... +++|.+. +=.+++..+||.|-+-.+++++
T Consensus 342 ~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~ 419 (421)
T PTZ00050 342 TKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFT 419 (421)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEe
Confidence 22468999998887777653 3443321 1156788889999888888876
No 96
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.05 E-value=1e-08 Score=106.53 Aligned_cols=92 Identities=15% Similarity=0.267 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSG-FCP-SPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~-~~~-~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.+|+.+|++++|+++|++++|||.+|+.+.. ... .+..+..+.-..|++..++++.++. +|++++.++..|.+.|++
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~~-acaSg~~Av~~Aa~~I~s 105 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVDR-QCGSSQQAIHFAAQAVMS 105 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeecc-hhhhHHHHHHHHHHHHHC
Confidence 3599999999999999999999999986531 111 2333444444577765688899997 999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 039838 215 QKDSDALVLSTEILS 229 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s 229 (466)
|..+.+||++.|..+
T Consensus 106 G~~d~vLv~G~e~ms 120 (382)
T PRK07801 106 GTQDLVVAGGVQNMS 120 (382)
T ss_pred CCCCEEEEcchhhhc
Confidence 999999999998553
No 97
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.04 E-value=1.1e-08 Score=106.43 Aligned_cols=94 Identities=16% Similarity=0.201 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHH-cCCCcCCcCEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHH
Q 039838 136 AQMVLFPVIENLLSK-VQISPQDIDILIINCSG-FCP-SPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALL 212 (466)
Q Consensus 136 a~~la~~Aa~~aL~~-agi~~~dID~LI~~~s~-~~~-~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll 212 (466)
+++|+..+++++|++ +|++|+|||.+|+.+.. ... .+..+..+....|++..++++.+++ +|++++.|+.+|..++
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~~-~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVNR-LCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeeec-hhHHHHHHHHHHHHHH
Confidence 346999999999997 69999999999997643 222 2455667888999986799999997 9999999999999999
Q ss_pred hcCCCCeEEEEEeccccC
Q 039838 213 KTQKDSDALVLSTEILST 230 (466)
Q Consensus 213 ~~~~~~~aLVVs~E~~s~ 230 (466)
++|..+.+||++.|.+|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999998874
No 98
>PRK06059 lipid-transfer protein; Provisional
Probab=99.03 E-value=9.2e-10 Score=114.90 Aligned_cols=92 Identities=11% Similarity=0.074 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeec-C-CCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCS-G-FCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~-~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.+|+.+|++++|+++|++++|||.||++++ + .+..|..+..++.++|++ +++++++++ +|++++.+|..|.++|++
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~~-~Casg~~al~~A~~~I~s 101 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSYA-ACASGSQALQSARAQILA 101 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceecccc-hhHHHHHHHHHHHHHHHC
Confidence 359999999999999999999999998653 2 343456678999999997 688999997 999999999999999999
Q ss_pred CCCCeEEEEEeccccC
Q 039838 215 QKDSDALVLSTEILST 230 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~ 230 (466)
+..+++||+++|..+.
T Consensus 102 G~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 102 GLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCEEEEEEEcccCC
Confidence 9999999999998764
No 99
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.99 E-value=1.9e-09 Score=113.43 Aligned_cols=93 Identities=16% Similarity=0.299 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+.+|++++|+++|++++|||.||+.+. +....+..+.+++..+|++.++++++++. +|++++.++..|.+++++|
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~-~CaSg~~al~~A~~~I~sG 106 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQR-NCASGMQALDSAAANIALG 106 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccc-hhhHHHHHHHHHHHHHHCC
Confidence 459999999999999999999999998653 33334677888999999975789999997 8999999999999999999
Q ss_pred CCCeEEEEEeccccC
Q 039838 216 KDSDALVLSTEILST 230 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~ 230 (466)
..+++||+++|..|.
T Consensus 107 ~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 107 RADLVLAGGVEAMSH 121 (426)
T ss_pred CCCEEEEEEEecccC
Confidence 999999999998775
No 100
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.99 E-value=2.3e-08 Score=103.86 Aligned_cols=94 Identities=14% Similarity=0.169 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHH-cCCCcCCcCEEEEeecCC-CC-CCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHH
Q 039838 136 AQMVLFPVIENLLSK-VQISPQDIDILIINCSGF-CP-SPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALL 212 (466)
Q Consensus 136 a~~la~~Aa~~aL~~-agi~~~dID~LI~~~s~~-~~-~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll 212 (466)
+.+|+..|++++|++ +|++|+|||.+++.+... .. .+..+..+....|++..++++.++. +|++++.|+.+|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~~-~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVNR-LCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhhh-hhHHHHHHHHHHHHHH
Confidence 346999999999997 599999999999975422 21 2446666666889987799999997 9999999999999999
Q ss_pred hcCCCCeEEEEEeccccC
Q 039838 213 KTQKDSDALVLSTEILST 230 (466)
Q Consensus 213 ~~~~~~~aLVVs~E~~s~ 230 (466)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HCCCCCEEEEeeehhccc
Confidence 999999999999998874
No 101
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.98 E-value=2.4e-09 Score=111.45 Aligned_cols=93 Identities=12% Similarity=0.127 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHH-HHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHh
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSI-IINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~-I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
+.+|+..|++++|+++|++|+|||.||++++ ++...+..+.+ +++.+|+. ++++++|++ +|++++.|+..|.++|+
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~~-~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMNN-LCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEecc-hhHHHHHHHHHHHHHHH
Confidence 4569999999999999999999999999764 44444555553 67778886 799999998 99999999999999999
Q ss_pred cCCCCeEEEEEeccccC
Q 039838 214 TQKDSDALVLSTEILST 230 (466)
Q Consensus 214 ~~~~~~aLVVs~E~~s~ 230 (466)
++..+.+||+++|..|.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999875
No 102
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.94 E-value=1.3e-07 Score=98.89 Aligned_cols=308 Identities=13% Similarity=0.107 Sum_probs=174.4
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhcccc-CCChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCC--CHHHHH--H
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVE-TFDSESMAFMSKVLTCSGQSEETYLPPALQYIPPKT--NQQESI--K 134 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~--~~~~~~--~ 134 (466)
++|.|+|+|+..|-- .+.+++.+.+..-. .+.+ ..+ +...+...+.....+. +++. .....+ .
T Consensus 2 ~rVvITG~G~vsp~G---~~~~~~w~~l~~G~sgi~~-----~~~-~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~ 69 (406)
T PRK07967 2 RRVVITGLGIVSSIG---NNQQEVLASLREGRSGITF-----SPE-FAEMGMRSQVWGNVKL---DPTGLIDRKVMRFMG 69 (406)
T ss_pred CcEEEEcceEECCCC---CCHHHHHHHHHcCCCceeE-----CCc-ccccCCCCceEEEcCC---ChhhcCCHHHhhcCC
Confidence 589999999999999 58899988763210 0100 000 1112222221111000 0000 001111 1
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCC-----cCEEEEeecCC------------------C--------CCC-cHHHHHHHHc
Q 039838 135 EAQMVLFPVIENLLSKVQISPQD-----IDILIINCSGF------------------C--------PSP-SLSSIIINKY 182 (466)
Q Consensus 135 ea~~la~~Aa~~aL~~agi~~~d-----ID~LI~~~s~~------------------~--------~~P-s~a~~I~~~l 182 (466)
....++..|++++|+++|+++++ +++++-++... . ..| ..+..|...+
T Consensus 70 r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 149 (406)
T PRK07967 70 DASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPF 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHH
Confidence 24468899999999999987543 44444332111 0 011 3677899999
Q ss_pred CCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCCCC---------------------CC--CCcc
Q 039838 183 SMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTGWY---------------------SG--NEKP 239 (466)
Q Consensus 183 Gl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~~---------------------~~--~dr~ 239 (466)
|++ -+++.++. +|++++.||..|.++|+.|..+.+||.++|..+..+. .+ .+|+
T Consensus 150 ~l~--Gp~~tvs~-aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~ 226 (406)
T PRK07967 150 KIK--GVNYSISS-ACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRD 226 (406)
T ss_pred CCC--CCcccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCC
Confidence 997 46777887 9999999999999999999999999999986432100 00 1222
Q ss_pred cccccccccccceeEEEeecCCCcccCcceEeeEE-eeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhH
Q 039838 240 KLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTV-RTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANI 318 (466)
Q Consensus 240 ~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~-~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i 318 (466)
..+.|+||+++||++.+....+ +-++...+ ......|+.+ +.. |. ++.
T Consensus 227 ----G~v~gEGaa~lvLe~~~~A~~r-ga~i~a~i~G~g~~~d~~~---~~~----------------p~--~~~----- 275 (406)
T PRK07967 227 ----GFVIAGGGGVVVVEELEHALAR-GAKIYAEIVGYGATSDGYD---MVA----------------PS--GEG----- 275 (406)
T ss_pred ----ceeeeceEEEEEEeeHHHHHhC-CCcEEEEEEEEEECCCCCC---CCC----------------CC--HHH-----
Confidence 5688999999999975432111 11221111 1111222210 100 11 111
Q ss_pred hhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHH-----HHHHHcCCChhhHHHHHHhH
Q 039838 319 TILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIR-----EIAKNLKLGERDIEAALMTL 393 (466)
Q Consensus 319 ~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~-----~l~~~Lgl~~e~~~~s~~~l 393 (466)
....+++.|+ +.+ .|||++..|..+-..-| .+.+.+|-..-.+ -.+=
T Consensus 276 -----------------~~~a~~~Al~-~~~-------~~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~~~~v---~s~K 327 (406)
T PRK07967 276 -----------------AVRCMQMALA-TVD-------TPIDYINTHGTSTPVGDVKELGAIREVFGDKSPAI---SATK 327 (406)
T ss_pred -----------------HHHHHHHHHh-CCC-------CCccEEEcCCCCCCCCCHHHHHHHHHHhCCCCCee---ECcc
Confidence 0112344555 322 38999999997765544 3455565321111 2233
Q ss_pred hhcCccccchHHHHHHH---HHHcCCCC-------------------------CCCEEEEEeechhhhhcceeEEE
Q 039838 394 HRFGNQSSSSLWYELAY---MEAKERVK-------------------------KGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 394 ~~~GNtssaSi~~~L~~---~~~~g~i~-------------------------~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
..+||+.+++-.+++.. ++++|.+. +-++++.-+||.|-.-.+++++.
T Consensus 328 ~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~ 403 (406)
T PRK07967 328 SLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRR 403 (406)
T ss_pred cccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEe
Confidence 57899999988776633 33333211 12467788899888888888764
No 103
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.93 E-value=1.1e-07 Score=101.79 Aligned_cols=91 Identities=10% Similarity=0.050 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHcCCC--cCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 137 QMVLFPVIENLLSKVQIS--PQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~--~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.+|+.+|++++|+++|++ ++|||.+++..............++.++|+.+ ........ ||+++..++..|...|++
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~~-GG~s~~~~v~~Aa~~Ias 105 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSPV-GGNSPQRLVNEAALRIAA 105 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEecC-CCHHHHHHHHHHHHHHHC
Confidence 459999999999999999 99999998743211122234578999999974 45555554 899999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 039838 215 QKDSDALVLSTEILS 229 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s 229 (466)
|..+.|||+++|..+
T Consensus 106 G~advVLv~G~E~~~ 120 (498)
T PRK08257 106 GEADVALVAGAEAQS 120 (498)
T ss_pred CCCCEEEEeeeeecc
Confidence 999999999999753
No 104
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.91 E-value=6.5e-08 Score=98.90 Aligned_cols=247 Identities=15% Similarity=0.076 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHHHcCC--CcCCcCEEEEeecCCC-----------------CCC---------cHHHHHHHHcCCCCCc
Q 039838 137 QMVLFPVIENLLSKVQI--SPQDIDILIINCSGFC-----------------PSP---------SLSSIIINKYSMKSDI 188 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi--~~~dID~LI~~~s~~~-----------------~~P---------s~a~~I~~~lGl~~~~ 188 (466)
.+++..|++++++++|+ +++++++++-++.... ..| ..+.+|...+|++ -
T Consensus 5 ~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~--G 82 (342)
T PRK14691 5 WRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK--G 82 (342)
T ss_pred HHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC--C
Confidence 35888999999999995 6778877775431110 011 3577889999997 4
Q ss_pred eEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC-----------C------------CCC-CCccccccc
Q 039838 189 KNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG-----------W------------YSG-NEKPKLLLN 244 (466)
Q Consensus 189 ~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~-----------~------------~~~-~dr~~l~~~ 244 (466)
+++-+.+ +|++++.||..|.++|+.|..+.+||.++|..... + .+. .+|+ .
T Consensus 83 p~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~----G 157 (342)
T PRK14691 83 PIGAPVT-ACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD----G 157 (342)
T ss_pred Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC----C
Confidence 7777887 99999999999999999999999999999873221 0 000 1222 5
Q ss_pred ccccccceeEEEeecCCCccc---CcceEeeEEeeeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhh
Q 039838 245 CLFRMGSVAVLLTNKKQAKRS---SKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITIL 321 (466)
Q Consensus 245 ~lfgDGAaA~lLs~~~~~~~~---~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~ 321 (466)
.++||||+++||++.+...++ ...++.+ .-..+|+.... .+ .|. ++
T Consensus 158 ~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g---~~~~~d~~~~~---~p--------------~p~--~~--------- 206 (342)
T PRK14691 158 FVMGEGAGLLIIEELEHALARGAKPLAEIVG---YGTSADAYHMT---SG--------------AED--GD--------- 206 (342)
T ss_pred ccccceEEEEEEeeHHHHHhCCCCceEEEEE---EEEEcCCCCCC---CC--------------CCC--HH---------
Confidence 789999999999976543211 1112222 11222221100 00 000 00
Q ss_pred cccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHH-----HHHHcCCChhhHHHHHHhHhhc
Q 039838 322 GFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIRE-----IAKNLKLGERDIEAALMTLHRF 396 (466)
Q Consensus 322 g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~-----l~~~Lgl~~e~~~~s~~~l~~~ 396 (466)
+....++++|+ +++ +. .+|||++..|..+-..-|. +.+.+|-. ..+ +.-.+=..+
T Consensus 207 -------------~~~~ai~~AL~-~Ag-l~---p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~-~v~s~K~~~ 266 (342)
T PRK14691 207 -------------GAYRAMKIALR-QAG-IT---PEQVQHLNAHATSTPVGDLGEINAIKHLFGES-NAL-AITSTKSAT 266 (342)
T ss_pred -------------HHHHHHHHHHH-HcC-CC---HHHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCc-eEECCcccc
Confidence 11123456677 677 77 5899999999987665444 44555521 111 101233568
Q ss_pred CccccchHHHHHHH---HHHcCCCC-------------------------CCCEEEEEeechhhhhcceeEEE
Q 039838 397 GNQSSSSLWYELAY---MEAKERVK-------------------------KGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 397 GNtssaSi~~~L~~---~~~~g~i~-------------------------~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
||+.+++-.+++.. .+++|.+. +-+.++.-+||-|-...+++++.
T Consensus 267 GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 267 GHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred cCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence 99876665444433 22332211 22467888899998888888864
No 105
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.89 E-value=7.9e-09 Score=101.96 Aligned_cols=95 Identities=14% Similarity=0.206 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
+.+|+..|++++|++++++|++||.|++.|. +....+..+..+.-..|++..++++.|++ .|++++.|+.+|...+++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~~-~CaSG~~Av~~a~~~I~s 104 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVNR-ACASGLQAVHLAAMAIAS 104 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeehh-hhhHHHHHHHHhhhhhcC
Confidence 4569999999999999999999999999764 44447788888888999988899999998 899999999999999999
Q ss_pred CCCCeEEEEEeccccCC
Q 039838 215 QKDSDALVLSTEILSTG 231 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~~ 231 (466)
|..+.+|+++.|.+|..
T Consensus 105 G~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 105 GEADVVLAGGVESMSRV 121 (264)
T ss_dssp TS-SEEEEEEEEETTTS
T ss_pred CCccEEEEecccccccc
Confidence 99999999999999874
No 106
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.87 E-value=7.2e-07 Score=93.05 Aligned_cols=303 Identities=14% Similarity=0.072 Sum_probs=174.3
Q ss_pred CCCceEEEEeeeecCCCCCCCChHHHHHhhccc--c-CCChhhHHHHHHHHHHcCC-CCeeecCCCccCCCCCCCHHHHH
Q 039838 58 KPSVTYLVDFSCYKPPCFCRVPFSSFLENSSLV--E-TFDSESMAFMSKVLTCSGQ-SEETYLPPALQYIPPKTNQQESI 133 (466)
Q Consensus 58 ~~~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~--~-~~~~~~~~f~~~i~~~sGi-~~r~~~~~~~~~~~~~~~~~~~~ 133 (466)
.+++|.|+|+|+..|-- .+.+++.+.+..- + .++.. ++-. + .++. ++-. ++ .+.++..... ..
T Consensus 4 ~~~rVvITGiG~vsp~G---~~~e~~w~aL~~G~sg~~~~~~--~~~~--~-~~~~~~~~~--~~--~~~~~~~~~r-~~ 70 (398)
T PRK06519 4 QPNDVVITGIGLVSSLG---EGLDAHWNALSAGRPQPNVDTE--TFAP--Y-PVHPLPEID--WS--QQIPKRGDQR-QM 70 (398)
T ss_pred CCCCEEEEcceEECCCC---CCHHHHHHHHHcCCCCCCCCcc--cccC--c-CcccccccC--hh--hcCCchhhhh-cc
Confidence 36689999999999999 5899999876432 1 12110 0000 0 0000 0000 00 0011110000 01
Q ss_pred HHHHHHHHHHHHHHHHHcCCCc-----CCcCEEEEeecCCC-----------------------------C--------C
Q 039838 134 KEAQMVLFPVIENLLSKVQISP-----QDIDILIINCSGFC-----------------------------P--------S 171 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~-----~dID~LI~~~s~~~-----------------------------~--------~ 171 (466)
.....++..|++++|+++|+++ +++++++-++.... . .
T Consensus 71 ~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 150 (398)
T PRK06519 71 ETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQL 150 (398)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhh
Confidence 1244689999999999999854 34555554432110 0 1
Q ss_pred C-cHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC----------CC------C
Q 039838 172 P-SLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG----------WY------S 234 (466)
Q Consensus 172 P-s~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~----------~~------~ 234 (466)
| ..+..|...+|++ -+++.+.+ +|++++.||..|.++|+.+..+.+||.++|..... .. +
T Consensus 151 ~n~~a~~is~~~gl~--Gp~~ti~~-acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p 227 (398)
T PRK06519 151 SNLLAGNISIVHKVT--GSSRTFMG-EESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAP 227 (398)
T ss_pred hhHHHHHHHHHhCCC--CccccccC-CccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCc
Confidence 1 2567788999997 47888998 99999999999999999999999999999862211 00 0
Q ss_pred CC-----CcccccccccccccceeEEEeecCCCcccCcceEeeEEeeeecCCccccccCeeeccCCCCcceEecchhhHH
Q 039838 235 GN-----EKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVRTNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQI 309 (466)
Q Consensus 235 ~~-----dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~ 309 (466)
.. +|+ ..+.|+||++++|++.+....| +-++...+... ..|. + +. +
T Consensus 228 ~~d~~~~~r~----G~v~GEGAa~lvLE~~~~A~~R-ga~i~AeI~G~-~~d~--~----------~~-----~------ 278 (398)
T PRK06519 228 VWSRGGEDGG----GFILGSGGAFLVLESREHAEAR-GARPYARISGV-ESDR--A----------RR-----A------ 278 (398)
T ss_pred hhccCccCCC----CeeeeceEEEEEEeeHHHHHhC-CCceEEEEEEE-eecC--C----------CC-----C------
Confidence 01 233 5788999999999986543211 11111111111 1110 0 00 0
Q ss_pred HHHHHHHhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHH-----HHHHHHcCCChh
Q 039838 310 AGETLRANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVI-----REIAKNLKLGER 384 (466)
Q Consensus 310 ~~~~~~~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl-----~~l~~~Lgl~~e 384 (466)
++ .....+++.|+ +++ + | +|||++..|..|.... +.+.+.++.+.
T Consensus 279 -~~----------------------~~~~am~~AL~-~Ag-l-~---~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pv- 328 (398)
T PRK06519 279 -PG----------------------DLEASLERLLK-PAG-G-L---AAPTAVISGATGAHPATAEEKAALEAALAGPV- 328 (398)
T ss_pred -hH----------------------HHHHHHHHHHH-HCC-C-c---ccCCEEEeCCCCCCCccHHHHHHHHHHcCCCc-
Confidence 00 01123355666 678 6 4 7999999998876543 34556667542
Q ss_pred hHHHHHHhHhhcCccccchHHHHHHH---HHHcCCCCCC-------------CEEEEEeechhhhhcceeEE
Q 039838 385 DIEAALMTLHRFGNQSSSSLWYELAY---MEAKERVKKG-------------DRVWLIGAGTGSKCGSVVLQ 440 (466)
Q Consensus 385 ~~~~s~~~l~~~GNtssaSi~~~L~~---~~~~g~i~~G-------------d~vllia~GsG~~~~s~v~r 440 (466)
..+=..+||+.+++-.+++.. ++++|.+.|. ...+..++|-|-.=+.++.+
T Consensus 329 -----sS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (398)
T PRK06519 329 -----RGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDASGEKPMSGAAREAVVTTVGHWRGEGMALVE 395 (398)
T ss_pred -----cccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCCCcccCccccccEEEEEeeccCCcceeEEEE
Confidence 234467899999988887754 4455644221 12556666665444544444
No 107
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.74 E-value=5.1e-08 Score=101.67 Aligned_cols=94 Identities=13% Similarity=0.164 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHH-cCCCcCCcCEEEEeecC-C-CCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHH
Q 039838 136 AQMVLFPVIENLLSK-VQISPQDIDILIINCSG-F-CPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALL 212 (466)
Q Consensus 136 a~~la~~Aa~~aL~~-agi~~~dID~LI~~~s~-~-~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll 212 (466)
+++|+..|++++|++ +|++|+|||.+|+.++. . ...+..+.++..+.|++.+++++.|++ .|++++.|+.+|.+.+
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~~-~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTINR-LCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEec-cchhHHHHHHHHHHHH
Confidence 456999999999997 49999999999997642 2 223778899999999997799999998 8999999999999999
Q ss_pred hcCCCCeEEEEEeccccC
Q 039838 213 KTQKDSDALVLSTEILST 230 (466)
Q Consensus 213 ~~~~~~~aLVVs~E~~s~ 230 (466)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 105 KSGEAALMIAGGVESMSR 122 (400)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999986
No 108
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.73 E-value=3.9e-08 Score=102.38 Aligned_cols=92 Identities=13% Similarity=0.190 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCC--CCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHh
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCS-GFC--PSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~--~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
.+|+.+|++++|+++|++++|||.+|++++ +.. ..+..+..+...+|++ .++++++++ +|++++.||.+|..+++
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~~-~CaSg~~Al~~A~~~I~ 100 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVEN-ACATGSAAVYAALDAIE 100 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeecc-ccHHHHHHHHHHHHHHH
Confidence 359999999999999999999999998653 111 1111122334466776 789999997 99999999999999999
Q ss_pred cCCCCeEEEEEeccccC
Q 039838 214 TQKDSDALVLSTEILST 230 (466)
Q Consensus 214 ~~~~~~aLVVs~E~~s~ 230 (466)
+|..+++||+++|..+.
T Consensus 101 sG~~d~vLvvg~e~~s~ 117 (389)
T PRK07516 101 AGRARIVLVVGAEKMTA 117 (389)
T ss_pred CCCCCEEEEEEehhhcc
Confidence 99999999999999763
No 109
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.73 E-value=4.3e-08 Score=102.50 Aligned_cols=90 Identities=17% Similarity=0.239 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCC-----CcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHH
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPS-----PSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQA 210 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~-----Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ 210 (466)
.+|+.+|++++|+++|++++|||.+|+++ ++++.. |.....++ .++. +++++++++ +|++++.||.+|..
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~~-~Casg~~al~~Aa~ 102 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHEA-ACASGSVATLAAMA 102 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeeccc-ccHHHHHHHHHHHH
Confidence 35999999999999999999999999864 344322 22223222 2443 468999998 99999999999999
Q ss_pred HHhcCCCCeEEEEEeccccC
Q 039838 211 LLKTQKDSDALVLSTEILST 230 (466)
Q Consensus 211 ll~~~~~~~aLVVs~E~~s~ 230 (466)
++++|..++|||+++|+.+.
T Consensus 103 ~I~sG~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 103 DLRAGRYDVALVVGVELMKT 122 (403)
T ss_pred HHHcCCCCEEEEEEEEecCC
Confidence 99999999999999998653
No 110
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.68 E-value=8.8e-08 Score=99.99 Aligned_cols=95 Identities=12% Similarity=0.131 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHH-cCCCcCCcCEEEEeecC--CCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHH
Q 039838 136 AQMVLFPVIENLLSK-VQISPQDIDILIINCSG--FCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALL 212 (466)
Q Consensus 136 a~~la~~Aa~~aL~~-agi~~~dID~LI~~~s~--~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll 212 (466)
+++|+..|++++|++ +|++|++||.+|+.+.. ....+..+..+....|++.+++++.++. +|+++..|+..|.+.+
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~~-aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINR-LCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEec-ccccHHHHHHHHHHHH
Confidence 346999999999996 69999999999996542 2223667778999999986799999997 9999999999999999
Q ss_pred hcCCCCeEEEEEeccccCC
Q 039838 213 KTQKDSDALVLSTEILSTG 231 (466)
Q Consensus 213 ~~~~~~~aLVVs~E~~s~~ 231 (466)
++|..+.+|+++.|.+|..
T Consensus 105 ~sG~~dvvlagGvEsmS~~ 123 (401)
T PRK09050 105 KAGEAELMIAGGVESMSRA 123 (401)
T ss_pred HCCCCCEEEEecccccccC
Confidence 9999999999999999863
No 111
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.68 E-value=1.1e-07 Score=99.36 Aligned_cols=95 Identities=17% Similarity=0.174 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CC-CCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHh
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINCS-GF-CPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~-~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
+++|+..|++++|+++|++|+|||.+++.+. +. ...+..+.+++...|++..++++.++. +|++++.|+..|...++
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~~-~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNR-LCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeeec-hhhhHHHHHHHHHHHHH
Confidence 3469999999999999999999999999653 22 223566777889999986799999997 99999999999999999
Q ss_pred cCCCCeEEEEEeccccCC
Q 039838 214 TQKDSDALVLSTEILSTG 231 (466)
Q Consensus 214 ~~~~~~aLVVs~E~~s~~ 231 (466)
+|..+.+|+++.|.+|..
T Consensus 105 sG~~dvvlagG~Esms~~ 122 (401)
T PRK08131 105 CGEGDLYLAGGVESMSRA 122 (401)
T ss_pred CCCCCEEEEEEecCCCCC
Confidence 999999999999998863
No 112
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.66 E-value=4.3e-06 Score=86.86 Aligned_cols=87 Identities=11% Similarity=0.108 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHcC-CCc-CCcCEEEEeecCCC-CCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 138 MVLFPVIENLLSKVQ-ISP-QDIDILIINCSGFC-PSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 138 ~la~~Aa~~aL~~ag-i~~-~dID~LI~~~s~~~-~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
+|+.+|++++|+++| +++ +|||.+++++.... ........++..+|+. ..+.+.+ |+++..++..|...+++
T Consensus 27 eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV~s 101 (385)
T PRK06066 27 EMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHINS 101 (385)
T ss_pred HHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHHHc
Confidence 499999999999999 998 79999987532111 1112224466889985 2344544 77899999999999999
Q ss_pred CCCCeEEEEEecccc
Q 039838 215 QKDSDALVLSTEILS 229 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s 229 (466)
|..++|||++.|+.+
T Consensus 102 G~~d~vLv~g~~~~~ 116 (385)
T PRK06066 102 GLANVVVVEAHSKPS 116 (385)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999653
No 113
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=1.2e-07 Score=98.56 Aligned_cols=93 Identities=10% Similarity=0.111 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSG-FCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~-~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+.+|++++|+++|++++|||.+|+.+.. ....+..+.+++..+|++.+++.+.++. +|++++.++..|...+++|
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~-~caSg~~av~~Aa~~I~sG 105 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNV-VCASGMLAVESAAREIMLG 105 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeeec-hhhHHHHHHHHHHHHHhcC
Confidence 4599999999999999999999999986532 1123345677999999975689999996 9999999999999999999
Q ss_pred CCCeEEEEEeccccC
Q 039838 216 KDSDALVLSTEILST 230 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~ 230 (466)
..+.+||++.|..+.
T Consensus 106 ~~d~vla~G~e~ms~ 120 (388)
T PRK06366 106 ERDLVIAGGMENMSN 120 (388)
T ss_pred CCCEEEEEeeEcccc
Confidence 999999988898774
No 114
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.65 E-value=1.2e-07 Score=98.81 Aligned_cols=94 Identities=18% Similarity=0.177 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHH-cCCCcCCcCEEEEeec--CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHH
Q 039838 136 AQMVLFPVIENLLSK-VQISPQDIDILIINCS--GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALL 212 (466)
Q Consensus 136 a~~la~~Aa~~aL~~-agi~~~dID~LI~~~s--~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll 212 (466)
+++|+..|++++|++ +|++|+|||.+|+.+. .....+..+..+...+|++.+++++.|++ +|++|+.|+..|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~-~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNR-LCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEeec-hhhhHHHHHHHHHHHH
Confidence 346999999999996 6999999999999653 22223667788999999986799999998 9999999999999999
Q ss_pred hcCCCCeEEEEEeccccC
Q 039838 213 KTQKDSDALVLSTEILST 230 (466)
Q Consensus 213 ~~~~~~~aLVVs~E~~s~ 230 (466)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999986
No 115
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.65 E-value=1.5e-06 Score=107.57 Aligned_cols=216 Identities=14% Similarity=0.103 Sum_probs=133.4
Q ss_pred HHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccC-CC----------------CCCC
Q 039838 174 LSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILST-GW----------------YSGN 236 (466)
Q Consensus 174 ~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~-~~----------------~~~~ 236 (466)
.+.+|.++||++ -+++.|.. +|++++.||++|.+.|+.|..+.+||.+.+.... .. .+..
T Consensus 185 ~A~RIS~~f~L~--Gps~tVdt-ACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLG--GMNCVVDA-ACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCC--CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 578899999997 47888997 9999999999999999999999999988876321 10 0111
Q ss_pred CcccccccccccccceeEEEeecCCCcccCcceEeeEEe-eeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHH
Q 039838 237 EKPKLLLNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVR-TNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLR 315 (466)
Q Consensus 237 dr~~l~~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~-t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~ 315 (466)
.+. ..++.|+|+++++|.+-....+ .+=++..+++ +-..+|++ ...++ .|...+
T Consensus 262 ~~a---dG~v~GEGag~vvLkrL~dA~~-dGd~IyAvI~G~g~~~DG~-~~~it----------------aP~~~g---- 316 (2582)
T TIGR02813 262 IDS---KGMMIGEGIGMMALKRLEDAER-DGDRIYAVIKGVGASSDGK-FKSIY----------------APRPEG---- 316 (2582)
T ss_pred CCC---CcccccceEEEEEeCcHHHHHh-CCCcEEEEEEEEEEcCCCC-CCCCc----------------CCCHHH----
Confidence 111 2578999999999987543211 1112222222 21222221 11111 121111
Q ss_pred HhHhhhcccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHH-----HHHHHHcCCCh---hhHH
Q 039838 316 ANITILGFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVI-----REIAKNLKLGE---RDIE 387 (466)
Q Consensus 316 ~~i~~~g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl-----~~l~~~Lgl~~---e~~~ 387 (466)
+ ..++++.++ ++| +. .+||+++..|-.|-.+- ..+.+.++-.. ..+
T Consensus 317 ---------------q-----~~~i~~Al~-~Ag-i~---p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~- 370 (2582)
T TIGR02813 317 ---------------Q-----AKALKRAYD-DAG-FA---PHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHI- 370 (2582)
T ss_pred ---------------H-----HHHHHHHHH-HcC-CC---HHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCc-
Confidence 1 123456666 677 88 48999999999776553 34555565321 111
Q ss_pred HHHHhHhhcCccccchHHHHHHHH---HHcCCCC--------------------------------CC--CEEEEEeech
Q 039838 388 AALMTLHRFGNQSSSSLWYELAYM---EAKERVK--------------------------------KG--DRVWLIGAGT 430 (466)
Q Consensus 388 ~s~~~l~~~GNtssaSi~~~L~~~---~~~g~i~--------------------------------~G--d~vllia~Gs 430 (466)
+--.+=..+||+-+++=..+|... +++|.+. .| .++..-+||.
T Consensus 371 ~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGf 450 (2582)
T TIGR02813 371 ALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGF 450 (2582)
T ss_pred eeeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccC
Confidence 001222678999999888777542 3333221 11 4677888999
Q ss_pred hhhhcceeEEEec
Q 039838 431 GSKCGSVVLQCLR 443 (466)
Q Consensus 431 G~~~~s~v~r~~~ 443 (466)
|.+-..++++-..
T Consensus 451 GGtN~hvvlee~~ 463 (2582)
T TIGR02813 451 GGTNFHMVLEEYS 463 (2582)
T ss_pred CCeeEEEEEeecC
Confidence 9999999998653
No 116
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.64 E-value=1.4e-07 Score=91.77 Aligned_cols=119 Identities=18% Similarity=0.279 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCC------cCEEEEeecCCC-----------------C------CC-cHHHHHHHHcCCC
Q 039838 136 AQMVLFPVIENLLSKVQISPQD------IDILIINCSGFC-----------------P------SP-SLSSIIINKYSMK 185 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~d------ID~LI~~~s~~~-----------------~------~P-s~a~~I~~~lGl~ 185 (466)
...|+..|+.+||+++|+++++ +.+++-++..++ + .| ..+..|+..+|++
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~ 166 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR 166 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC
Confidence 5579999999999999999853 444443332210 1 22 3578999999997
Q ss_pred CCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEec-cccCCC---------CCCC------Ccccccccccccc
Q 039838 186 SDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTE-ILSTGW---------YSGN------EKPKLLLNCLFRM 249 (466)
Q Consensus 186 ~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E-~~s~~~---------~~~~------dr~~l~~~~lfgD 249 (466)
-+++.+.+ +|++++.||+.|.++|+.|..+.+||.++| ..+... ...+ ++.. ...++|+
T Consensus 167 --G~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~gE 241 (254)
T PF00109_consen 167 --GPSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVLGE 241 (254)
T ss_dssp --SSEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-BB-
T ss_pred --Cccccccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEEEC
Confidence 46777888 999999999999999999999999999999 444310 0111 1111 3689999
Q ss_pred cceeEEEeec
Q 039838 250 GSVAVLLTNK 259 (466)
Q Consensus 250 GAaA~lLs~~ 259 (466)
||+++||++.
T Consensus 242 Ga~~~vLe~~ 251 (254)
T PF00109_consen 242 GAGALVLERL 251 (254)
T ss_dssp EEEEEEEEEH
T ss_pred ceEEEEEEEh
Confidence 9999999874
No 117
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.61 E-value=1.4e-07 Score=99.31 Aligned_cols=93 Identities=14% Similarity=0.173 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+..|++++|+++|++|++||.+|+.+. .....+.++.++.-..|++..++++.++. +|++++.|+.+|..++++|
T Consensus 32 ~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~~-~CaSG~~A~~~a~~~I~sG 110 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVTR-ACATSFQSAVNVAESIMAG 110 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhhh-hhhHHHHHHHHHHHHHHCC
Confidence 459999999999999999999999999754 22223456666777789987799999997 9999999999999999999
Q ss_pred CCCeEEEEEeccccC
Q 039838 216 KDSDALVLSTEILST 230 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~ 230 (466)
..+.+|+++.|.+|.
T Consensus 111 ~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 111 AIDIGIAGGADSSSV 125 (430)
T ss_pred CCCEEEEeeeEcccC
Confidence 999999999999985
No 118
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.58 E-value=2.8e-07 Score=96.26 Aligned_cols=92 Identities=17% Similarity=0.158 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+.+|++++|+++|++++|||.+++.+. .++........+.+.+|++ ..+++.+.+ +|++++.++..|...+++|
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~~-~c~sg~~ai~~A~~~I~sG 105 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVEN-FCATGSEAFRGAVYAVASG 105 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEec-ccHHHHHHHHHHHHHHHCC
Confidence 359999999999999999999999998653 2221122235688899997 588999997 9999999999999999999
Q ss_pred CCCeEEEEEeccccC
Q 039838 216 KDSDALVLSTEILST 230 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~ 230 (466)
..+.+||++.|+.+.
T Consensus 106 ~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 106 AYDIALALGVEKLKD 120 (398)
T ss_pred CCCEEEEEEEeeccc
Confidence 999999999998764
No 119
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.56 E-value=3.9e-07 Score=96.17 Aligned_cols=93 Identities=18% Similarity=0.279 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCC--cCEEEEeecC---CCCCCcHHHHHHHHcCCC------CCceEEEecCCcchHHHHHH
Q 039838 137 QMVLFPVIENLLSKVQISPQD--IDILIINCSG---FCPSPSLSSIIINKYSMK------SDIKNFNLSGMGCSASALAI 205 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~d--ID~LI~~~s~---~~~~Ps~a~~I~~~lGl~------~~~~~~dl~~mgCs~~l~aL 205 (466)
++|+..|++++|+++|++++| ||.+|+.+.. +...+..+..+...+|++ ..++++.++. +|++++.|+
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~-~caSG~~Ai 127 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEG-ACASGGLAV 127 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEEC-cCHHHHHHH
Confidence 459999999999999999999 9999986531 112355667777666554 3789999997 999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccccC
Q 039838 206 DMAQALLKTQKDSDALVLSTEILST 230 (466)
Q Consensus 206 ~lA~~ll~~~~~~~aLVVs~E~~s~ 230 (466)
..|...+++|..+.+||++.|..+.
T Consensus 128 ~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 128 QSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHCCCCCEEEEEEEeeccc
Confidence 9999999999999999999999875
No 120
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.53 E-value=4.3e-07 Score=95.75 Aligned_cols=92 Identities=12% Similarity=0.120 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC-CCCCcHH-HHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGF-CPSPSLS-SIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~-~~~Ps~a-~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.+|+.+|+++||+++|++++|||.+++++..+ ...+..+ ..++..+|++ ..+++.+.. +|+++..|+..|...|++
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~~-~~aSg~~ai~~A~~~I~s 115 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIEG-GGATGGLAFQAGYEEIAS 115 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEeC-CcHHHHHHHHHHHHHHHc
Confidence 35999999999999999999999988765322 2222333 3467999998 589999997 999999999999999999
Q ss_pred CCCCeEEEEEeccccC
Q 039838 215 QKDSDALVLSTEILST 230 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~ 230 (466)
|..+.|||+++|..+.
T Consensus 116 G~~~~vLv~G~e~~s~ 131 (430)
T PRK06365 116 GRMDCVAVYGFETMSH 131 (430)
T ss_pred CCCCEEEEEEeeeccc
Confidence 9999999999997653
No 121
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=98.52 E-value=8.7e-07 Score=87.07 Aligned_cols=95 Identities=13% Similarity=0.092 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
|.+|+.-|++.+|+|++++++|++-+|+.+ .+-+.--..+.+.+---||+-++.+..++ +.|++++.|+.+|..-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhc
Confidence 456999999999999999999999999854 34444455567777777888889999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccccCC
Q 039838 215 QKDSDALVLSTEILSTG 231 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~~ 231 (466)
|..+-++..+.|.+|.-
T Consensus 109 G~~divVaGGmEsMS~v 125 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSNV 125 (396)
T ss_pred CCccEEEecccchhccC
Confidence 99999999999999873
No 122
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.43 E-value=1.2e-06 Score=92.22 Aligned_cols=93 Identities=9% Similarity=0.115 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC-CCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGF-CPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~-~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+|+..|++++|+++|++++|||.+|+.+... ...+..+..+.-..|++...+++.++. +|++++.++..|..+|++|
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~~-~CaSG~~ai~~A~~~I~sG 110 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQQ-ACGTGLEAAILVANKIALG 110 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeeec-hhhHHHHHHHHHHHHHHCC
Confidence 35999999999999999999999999976321 112445666555666755689999997 9999999999999999999
Q ss_pred CCCeEEEEEeccccC
Q 039838 216 KDSDALVLSTEILST 230 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~ 230 (466)
..+.+||++.|.+|.
T Consensus 111 ~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 111 QIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCEEEEeeEEccCC
Confidence 999999999999885
No 123
>PRK07937 lipid-transfer protein; Provisional
Probab=98.31 E-value=5.1e-05 Score=78.02 Aligned_cols=87 Identities=21% Similarity=0.129 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCC-C-CcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINCSGFCP-S-PSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~-~-Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
+|+.+|++++|+++|++++|||.++.+++ +.. . ......+...+|+.+......+. +++..++..|...+++|
T Consensus 26 el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 26 EMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhcC
Confidence 49999999999999999999998854333 211 1 11123455667874344455554 35777999999999999
Q ss_pred CCCeEEEEEecccc
Q 039838 216 KDSDALVLSTEILS 229 (466)
Q Consensus 216 ~~~~aLVVs~E~~s 229 (466)
..+.|||++.|+.+
T Consensus 101 ~~d~VLv~g~~k~~ 114 (352)
T PRK07937 101 EVDTALVYGFGKSS 114 (352)
T ss_pred CCCEEEEEEecccC
Confidence 99999999999754
No 124
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.27 E-value=3.8e-05 Score=75.71 Aligned_cols=117 Identities=19% Similarity=0.191 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQK 216 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~ 216 (466)
..|..+|++.+|+|++++++|||.++-.--....+ .++..++.|++ +-+.+.| +||.+.-+|.+|.-++..+-
T Consensus 52 ~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i--~s~f~ar~l~i----Pf~Glyg-ACST~~e~l~laa~~vdgg~ 124 (329)
T PF07451_consen 52 SKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQII--SSSFAARDLGI----PFLGLYG-ACSTMMESLALAAMLVDGGF 124 (329)
T ss_dssp HHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCC--HHHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhH--HHHHHHHhcCC----Cccchhh-HHHHHHHHHHHHHHHHhCCC
Confidence 34999999999999999999999887653222222 35778888865 6799999 99999999999999999999
Q ss_pred CCeEEEEEeccccC---CCCC----CCCcccccccccccccceeEEEeecCCC
Q 039838 217 DSDALVLSTEILST---GWYS----GNEKPKLLLNCLFRMGSVAVLLTNKKQA 262 (466)
Q Consensus 217 ~~~aLVVs~E~~s~---~~~~----~~dr~~l~~~~lfgDGAaA~lLs~~~~~ 262 (466)
.+++|+.++--... .|.. +..|. .+...---||+|+||++....
T Consensus 125 a~~vla~tSSH~~tAERQfR~P~EyG~Qrp--~tAqwTVTGaGa~il~~~~~~ 175 (329)
T PF07451_consen 125 ADYVLAATSSHFATAERQFRFPTEYGGQRP--PTAQWTVTGAGAAILSKEGSG 175 (329)
T ss_dssp -SEEEEEEEE-CCHHHHHT---GGGT------TT--EE--EEEEEEEESS--S
T ss_pred cceEEEEeccccchhhhhccCchhccCCCC--CcccEEEeceEEEEEecCCCC
Confidence 99999887754432 2222 12232 124455679999999987654
No 125
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.22 E-value=8.9e-05 Score=77.47 Aligned_cols=120 Identities=15% Similarity=0.173 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCCcC--EEEE--eecC--C----C--------C------------CC-cHHHHHHHHcC
Q 039838 136 AQMVLFPVIENLLSKVQIS-PQDID--ILII--NCSG--F----C--------P------------SP-SLSSIIINKYS 183 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~-~~dID--~LI~--~~s~--~----~--------~------------~P-s~a~~I~~~lG 183 (466)
...++..|+++|++++|++ ..+++ +-+. ++.. . . + .| ..+..++..+|
T Consensus 71 ~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g 150 (412)
T COG0304 71 FSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFG 150 (412)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhC
Confidence 5669999999999999998 33443 2222 2111 1 0 0 22 24567888999
Q ss_pred CCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc-ccC--------------C-------CCC-CCCccc
Q 039838 184 MKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEI-LST--------------G-------WYS-GNEKPK 240 (466)
Q Consensus 184 l~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~-~s~--------------~-------~~~-~~dr~~ 240 (466)
++ -+.+.+.+ +|+++..||..|.++|+.|..+.+++.++|. ++. . +++ ..+|+
T Consensus 151 ~~--G~~~~~~t-ACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~Rd- 226 (412)
T COG0304 151 LK--GPNYTPVT-ACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRD- 226 (412)
T ss_pred CC--CCcCChhh-hHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCCC-
Confidence 97 47788888 9999999999999999999999999999976 221 1 111 12344
Q ss_pred ccccccccccceeEEEeecCCC
Q 039838 241 LLLNCLFRMGSVAVLLTNKKQA 262 (466)
Q Consensus 241 l~~~~lfgDGAaA~lLs~~~~~ 262 (466)
..++|.||+++||+..+..
T Consensus 227 ---Gfv~gEGag~lVLE~~ehA 245 (412)
T COG0304 227 ---GFVIGEGAGALVLEELEHA 245 (412)
T ss_pred ---CEEEecceeEEEecChhhH
Confidence 5789999999999987654
No 126
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.17 E-value=7.3e-06 Score=85.31 Aligned_cols=86 Identities=15% Similarity=0.046 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKD 217 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~ 217 (466)
+|+.+|++++|+++|++++|||.++.++.. .+.....++..+|++ ..+...+.. ||+++..++..|...|++|..
T Consensus 27 ~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~~-gg~s~~~a~~~A~~~I~sG~~ 101 (388)
T PRK08142 27 QLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTET-GGSSYLAHVGHAAQAIAAGKC 101 (388)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-CeeeccccC-CcHHHHHHHHHHHHHHHcCCC
Confidence 499999999999999999999998753211 111124589999996 578888886 999999999999999999999
Q ss_pred CeEEEEEeccc
Q 039838 218 SDALVLSTEIL 228 (466)
Q Consensus 218 ~~aLVVs~E~~ 228 (466)
+.||||+.|+.
T Consensus 102 d~vLvvg~e~~ 112 (388)
T PRK08142 102 SVALITLAGRP 112 (388)
T ss_pred CEEEEEeeeec
Confidence 99999999974
No 127
>PRK07855 lipid-transfer protein; Provisional
Probab=98.03 E-value=2.4e-05 Score=81.42 Aligned_cols=83 Identities=12% Similarity=0.116 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKD 217 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~ 217 (466)
+|+.+|++++|+++|++++|||.+++.+.. ..+. ..+++.+|+++..+...+.+ ||+++..++..|...+++|..
T Consensus 26 ~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~~-gg~sg~~~~~~A~~~I~sG~~ 100 (386)
T PRK07855 26 RLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIHY-GGGAACATVQQAAMAVATGVA 100 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeecC-CcHHHHHHHHHHHHHHHCCCC
Confidence 499999999999999999999999874321 1222 46889999974245568887 999999999999999999999
Q ss_pred CeEEEEEe
Q 039838 218 SDALVLST 225 (466)
Q Consensus 218 ~~aLVVs~ 225 (466)
+.|||+++
T Consensus 101 d~vLv~g~ 108 (386)
T PRK07855 101 DVVVCYRA 108 (386)
T ss_pred CEEEEEee
Confidence 99999987
No 128
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=97.98 E-value=7.5e-05 Score=73.45 Aligned_cols=92 Identities=14% Similarity=0.152 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEee--cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINC--SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~--s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
+|...+.+..+|+++++|+.|+-+++.+ .+... -+.+.|-+-.-|++..++..-++- -|++|++|+.....-+++|
T Consensus 63 eLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~P~tvpv~tvNR-qCsSGLqaVadiA~~Ir~G 140 (435)
T KOG1389|consen 63 ELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGFPETVPVRTVNR-QCSSGLQAVADIAAKIRAG 140 (435)
T ss_pred HHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-hHHHHHHHHHcCCCcccchhhhhh-hhhhHHHHHHHHHHHHhcC
Confidence 3888999999999999999999999854 23322 233444445568887777777886 7999999999999999999
Q ss_pred CCCeEEEEEeccccCC
Q 039838 216 KDSDALVLSTEILSTG 231 (466)
Q Consensus 216 ~~~~aLVVs~E~~s~~ 231 (466)
.++-.|-.+.|.++.+
T Consensus 141 ~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 141 FYDIGLAAGVESMTTN 156 (435)
T ss_pred ceeeecccchhhhccc
Confidence 9999999999988875
No 129
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.93 E-value=0.00066 Score=79.14 Aligned_cols=293 Identities=14% Similarity=0.111 Sum_probs=163.0
Q ss_pred CceEEEEeeeecCCCCCCCChHHHHHhhcccc----CCChhhHHHHHHHHHHcCCCC-----eeecC-----CCccCCCC
Q 039838 60 SVTYLVDFSCYKPPCFCRVPFSSFLENSSLVE----TFDSESMAFMSKVLTCSGQSE-----ETYLP-----PALQYIPP 125 (466)
Q Consensus 60 ~~v~I~~~~~~~P~~~~rv~~e~~~~~~~~~~----~~~~~~~~f~~~i~~~sGi~~-----r~~~~-----~~~~~~~~ 125 (466)
.+|-|+|++|.+|.- -+.++|.+.+.... .+.++. +-.+..+-.+ ++|.. ++.....+
T Consensus 4 ~~IAIiGm~~rfPga---~~~~~~W~~l~~g~~~i~~ip~~r-----wd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~ 75 (1061)
T COG3321 4 EPIAIIGMACRFPGA---DSPEEFWDLLKEGRDEITEVPADR-----WDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDA 75 (1061)
T ss_pred CcEEEEeccccCCCC---CCHHHHHHHHhcCCceeeecChhh-----hhHhhccCCccccccccccccccccCCccccCH
Confidence 459999999999995 48899999876531 122221 1111111111 11110 00000000
Q ss_pred ---CCCHHHHH--HHHHHHHHHHHHHHHHHcCCCcCCcCE----EEEee-cCCCCCC-------------------cHHH
Q 039838 126 ---KTNQQESI--KEAQMVLFPVIENLLSKVQISPQDIDI----LIINC-SGFCPSP-------------------SLSS 176 (466)
Q Consensus 126 ---~~~~~~~~--~ea~~la~~Aa~~aL~~agi~~~dID~----LI~~~-s~~~~~P-------------------s~a~ 176 (466)
..+..++. +=...|..+.+-++||++|++|+.+.. |..+. ..+|... ..+.
T Consensus 76 ~fFgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~ 155 (1061)
T COG3321 76 LFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAG 155 (1061)
T ss_pred HHcCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHH
Confidence 01111110 112238889999999999999998884 44443 3343322 2678
Q ss_pred HHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCC--CC--------C--CCCcc--ccc
Q 039838 177 IIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTG--WY--------S--GNEKP--KLL 242 (466)
Q Consensus 177 ~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~--~~--------~--~~dr~--~l~ 242 (466)
+|...|+++ -+++.|.. +||+.+.|+++|...|+.|..+.||+=+....-.. .+ . ++-+. .--
T Consensus 156 Risy~l~l~--GPs~~vdt-aCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~a 232 (1061)
T COG3321 156 RISYVLGLS--GPSVTVDT-ACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADA 232 (1061)
T ss_pred HHHHHhcCC--CCCccccc-hhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCC
Confidence 899999997 58888997 99999999999999999999888887666554221 10 0 00000 001
Q ss_pred ccccccccceeEEEeecCCCcccCcceEeeEEe-eeecCCccccccCeeeccCCCCcceEecchhhHHHHHHHHHhHhhh
Q 039838 243 LNCLFRMGSVAVLLTNKKQAKRSSKYKVVRTVR-TNKAFDDKAYNSGMREEDSNGKLGVTLNRDLLQIAGETLRANITIL 321 (466)
Q Consensus 243 ~~~lfgDGAaA~lLs~~~~~~~~~~~~L~~~~~-t~~~~d~~~~~~~~~~~d~~g~~g~~ls~d~~~~~~~~~~~~i~~~ 321 (466)
..++.|.|+++++|.+-.... +.+=++..+++ +-...|++ .. |+. .|...
T Consensus 233 dG~v~geG~g~vvLKrl~~A~-~dgd~IyavI~gsavn~dG~-~~------------glt----aP~~~----------- 283 (1061)
T COG3321 233 DGYVRGEGAGVVVLKRLSDAE-RDGDRIYAVIRGSAVNQDGR-SN------------GLT----APNLE----------- 283 (1061)
T ss_pred CCEEEeeeEEEEEEEEhHHHH-hCCCeEEEEEEeeeeccCCC-cC------------CCC----CCCHH-----------
Confidence 256899999999998754321 11112223332 22222221 11 111 11110
Q ss_pred cccccchhHHHHHHHHHHHHhhhhccCCCCCCCccccccEEEecCCCHHHHHH-----HHHHcCCCh-hhHHHHHHhHhh
Q 039838 322 GFKILPFRELFWLGVSVIKKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIRE-----IAKNLKLGE-RDIEAALMTLHR 395 (466)
Q Consensus 322 g~~vl~~~e~~~~~~~~v~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~-----l~~~Lgl~~-e~~~~s~~~l~~ 395 (466)
+-..+.++.|+ +++ +. ..+|+++=.|..|..+-|- +.+.++-.. ++.-.--..-.+
T Consensus 284 -------------aQ~~v~~~al~-~a~-i~---p~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsN 345 (1061)
T COG3321 284 -------------AQADVIREALA-DAG-ID---PATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSN 345 (1061)
T ss_pred -------------HHHHHHHHHHH-hcC-CC---cccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccc
Confidence 11223455666 667 77 4899999999977655444 334443221 221111233467
Q ss_pred cCccccchHHHHHHH
Q 039838 396 FGNQSSSSLWYELAY 410 (466)
Q Consensus 396 ~GNtssaSi~~~L~~ 410 (466)
.||+.+|.=...|-.
T Consensus 346 iGH~~~AaGiagliK 360 (1061)
T COG3321 346 IGHLEAAAGIAGLIK 360 (1061)
T ss_pred cccHHHHHHHHHHHH
Confidence 888888876666643
No 130
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=97.82 E-value=7.4e-05 Score=74.14 Aligned_cols=62 Identities=21% Similarity=0.252 Sum_probs=46.6
Q ss_pred hHHHHHHhHhhcCccccchHHHHHHHHH--HcCCCCCCCEEEEEeechhhhhcceeEEEecCCC
Q 039838 385 DIEAALMTLHRFGNQSSSSLWYELAYME--AKERVKKGDRVWLIGAGTGSKCGSVVLQCLRPIV 446 (466)
Q Consensus 385 ~~~~s~~~l~~~GNtssaSi~~~L~~~~--~~g~i~~Gd~vllia~GsG~~~~s~v~r~~~~~~ 446 (466)
+++||...-++.||+.++|++..|+.++ ..+..-.|+||.+.++|||.......++......
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~~~ 206 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPGAE 206 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TTGG
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCCcc
Confidence 6667777778999999999999999998 3344458999999999999877777777665443
No 131
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.63 E-value=0.00022 Score=74.50 Aligned_cols=95 Identities=13% Similarity=0.209 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHc--CCCcCCcCEEEEeec-C-CCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHH
Q 039838 137 QMVLFPVIENLLSKV--QISPQDIDILIINCS-G-FCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALL 212 (466)
Q Consensus 137 ~~la~~Aa~~aL~~a--gi~~~dID~LI~~~s-~-~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll 212 (466)
+++.....+..+++. ++++.+||.+|..|. . ....+..+..++...|++.+++.+.++. +|++++.|+..|...+
T Consensus 28 e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~-~c~SG~~Av~~A~~~I 106 (392)
T COG0183 28 EALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNR-ACASGLAAVRLAAQAI 106 (392)
T ss_pred HHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEec-cchhHHHHHHHHHHHH
Confidence 345666666666543 688888999998653 2 2346788899999999986799999997 9999999999999999
Q ss_pred hcCCCCeEEEEEeccccCCC
Q 039838 213 KTQKDSDALVLSTEILSTGW 232 (466)
Q Consensus 213 ~~~~~~~aLVVs~E~~s~~~ 232 (466)
++|..+.+|+++.|+.|...
T Consensus 107 ~sG~~dvvlagG~E~mS~~~ 126 (392)
T COG0183 107 ASGEADVVLAGGVEKMSDAP 126 (392)
T ss_pred HCCCCCEEEEEeeeeccCCC
Confidence 99999999999999999753
No 132
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.09 E-value=0.0054 Score=61.79 Aligned_cols=119 Identities=15% Similarity=0.184 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcC---CcC-----EEEEeecC---------------------CCCCC----c-HHHHHHHH
Q 039838 136 AQMVLFPVIENLLSKVQISPQ---DID-----ILIINCSG---------------------FCPSP----S-LSSIIINK 181 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~---dID-----~LI~~~s~---------------------~~~~P----s-~a~~I~~~ 181 (466)
...++..|+++||+++++-+. +.| ++|-.+-. .+..| . .+.+|.-+
T Consensus 94 ~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~ 173 (440)
T KOG1394|consen 94 FTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMK 173 (440)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhh
Confidence 667999999999999997765 222 23322110 01233 2 36789999
Q ss_pred cCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCCC------------C---CC--------CCc
Q 039838 182 YSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTGW------------Y---SG--------NEK 238 (466)
Q Consensus 182 lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~------------~---~~--------~dr 238 (466)
||++ -+...++. +|+.+..+|.-|.++|+.|..+..|-=++|.+-..+ . ++ .+|
T Consensus 174 ~gl~--GpnhsvST-ACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~R 250 (440)
T KOG1394|consen 174 YGLR--GPNHSVST-ACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKR 250 (440)
T ss_pred hcCc--CCchhhHh-hhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCC
Confidence 9997 57788887 999999999999999999988777777777643221 0 01 123
Q ss_pred ccccccccccccceeEEEeecCC
Q 039838 239 PKLLLNCLFRMGSVAVLLTNKKQ 261 (466)
Q Consensus 239 ~~l~~~~lfgDGAaA~lLs~~~~ 261 (466)
+ ..+.|.|++.++|+.-+.
T Consensus 251 d----GFVmGEGagvlvlEelEH 269 (440)
T KOG1394|consen 251 D----GFVMGEGAGVLVLEELEH 269 (440)
T ss_pred C----ceeeccceeEEehHhHHH
Confidence 3 578999999999987554
No 133
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=97.04 E-value=0.00082 Score=64.90 Aligned_cols=89 Identities=17% Similarity=0.267 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQK 216 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~ 216 (466)
+++.+|..++|++++++-++|+.-++.- -.+. ....+-.-++||. .++-|++++ .|+.+-.||.+|+++++++.
T Consensus 31 d~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesgn 105 (408)
T KOG1406|consen 31 DFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESGN 105 (408)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcCC
Confidence 3899999999999999999988765531 1121 1223445589997 799999999 99999999999999999999
Q ss_pred CCeEEEEEeccccCC
Q 039838 217 DSDALVLSTEILSTG 231 (466)
Q Consensus 217 ~~~aLVVs~E~~s~~ 231 (466)
.+.+|..+-|++++.
T Consensus 106 ~dcvlalgfekm~~g 120 (408)
T KOG1406|consen 106 SDCVLALGFEKMERG 120 (408)
T ss_pred cceEEeechhhhCCc
Confidence 999999999998763
No 134
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.90 E-value=0.017 Score=55.94 Aligned_cols=93 Identities=14% Similarity=0.105 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEE-e---ecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHH
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILII-N---CSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQAL 211 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~-~---~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~l 211 (466)
+.++..-|++.+|+.+++.++.+|.+|+ | +|.+- -.++..|--+.|.+.+.+++.|+- =|.++.+++-.+.+-
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDg--IYl~RHvGL~~GvP~e~pALtiNR-LCGSGFQsiVNgaQ~ 104 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDG--IYLARHVGLRVGVPKETPALTINR-LCGSGFQSIVNGAQE 104 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCc--eEeeeccccccCCcCccCceeehh-hhcccHHHHHhhHHH
Confidence 3458999999999999999999999998 3 23321 122334444555667788999998 599999999999999
Q ss_pred HhcCCCCeEEEEEeccccCC
Q 039838 212 LKTQKDSDALVLSTEILSTG 231 (466)
Q Consensus 212 l~~~~~~~aLVVs~E~~s~~ 231 (466)
+..+..+-+|.=++|++|..
T Consensus 105 I~vgea~ivL~GGtEnMSq~ 124 (396)
T KOG1391|consen 105 ICVGEAEIVLCGGTENMSQA 124 (396)
T ss_pred hhcCcceEEEecCccccccC
Confidence 99998899999999999873
No 135
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=95.28 E-value=0.018 Score=46.89 Aligned_cols=75 Identities=17% Similarity=0.227 Sum_probs=46.3
Q ss_pred HHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEE---ecCCcchHHHHHHHHHHHHHhcCCCCeEEEEE
Q 039838 148 LSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFN---LSGMGCSASALAIDMAQALLKTQKDSDALVLS 224 (466)
Q Consensus 148 L~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~d---l~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs 224 (466)
|+++|++++|||.+|... ........+.+++|++.+....+ .++++|++-..+|..+..-=+..+++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq----~~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQ----ASKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-S----SSHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCC----CCHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 689999999999999853 22344566899999985544333 34556777777776555522334678888887
Q ss_pred ec
Q 039838 225 TE 226 (466)
Q Consensus 225 ~E 226 (466)
.-
T Consensus 77 ~G 78 (90)
T PF08541_consen 77 FG 78 (90)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 136
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=94.89 E-value=0.1 Score=53.46 Aligned_cols=82 Identities=11% Similarity=0.226 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-----EEecCCcchHHHHHHHHHHHH
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKN-----FNLSGMGCSASALAIDMAQAL 211 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~-----~dl~~mgCs~~l~aL~lA~~l 211 (466)
...+..+++++|+++|++++|||.+++.. +.+.+-..+.++||++++-.. -+++++++++...+|..+...
T Consensus 207 ~~~~~~~~~~~L~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~ 282 (345)
T TIGR00748 207 FHHVVTAAKGLMEKLGLTPEDFDYAVFHQ----PNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI 282 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEeCC----CChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHh
Confidence 34456889999999999999999998864 233355668999999743221 267888888888888766542
Q ss_pred HhcCCCCeEEEEE
Q 039838 212 LKTQKDSDALVLS 224 (466)
Q Consensus 212 l~~~~~~~aLVVs 224 (466)
..+++++|+++
T Consensus 283 --~~~Gd~vll~~ 293 (345)
T TIGR00748 283 --AEPGDRILAVS 293 (345)
T ss_pred --cCCCCEEEEEE
Confidence 23344555444
No 137
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.59 E-value=0.15 Score=52.94 Aligned_cols=91 Identities=13% Similarity=0.159 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHc-----CCCCCc-e--EEEecCCcchHHHHHH
Q 039838 134 KEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKY-----SMKSDI-K--NFNLSGMGCSASALAI 205 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~l-----Gl~~~~-~--~~dl~~mgCs~~l~aL 205 (466)
+.+.....++++++|+++|++++|||.++... +.+..-..++++| |++++- . --++++++|++...+|
T Consensus 268 ~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq----~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L 343 (378)
T PRK06816 268 ENIVVYTIKPLLELVDKRNLDPDDIDYFLPHY----SSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIML 343 (378)
T ss_pred HHhHHHHHHHHHHHHHHcCCChhhCCEEeeCc----ccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHH
Confidence 34555668899999999999999999998753 2333445677776 776432 1 2256677778888888
Q ss_pred HHHHHHHhcCCCCeEEEEEeccc
Q 039838 206 DMAQALLKTQKDSDALVLSTEIL 228 (466)
Q Consensus 206 ~lA~~ll~~~~~~~aLVVs~E~~ 228 (466)
..|..-=+-.+++++++++.|..
T Consensus 344 ~~a~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 344 DELLNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HHHHHcCCCCCCCEEEEEEeccc
Confidence 76633111235788888887753
No 138
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.89 E-value=0.21 Score=50.66 Aligned_cols=91 Identities=14% Similarity=0.173 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEE---ecCCcchHHHHHHHHH
Q 039838 132 SIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFN---LSGMGCSASALAIDMA 208 (466)
Q Consensus 132 ~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~d---l~~mgCs~~l~aL~lA 208 (466)
..+++...+..+.+++|+++|++++|||.+++.. ..+..-..+.+++|++.+-...+ .+++++++...+|+.+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~ 308 (338)
T PRK09258 233 LLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQ----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCC----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH
Confidence 3445566777889999999999999999988753 23344568899999974333222 5555566666666544
Q ss_pred HHHHhcCCCCeEEEEEec
Q 039838 209 QALLKTQKDSDALVLSTE 226 (466)
Q Consensus 209 ~~ll~~~~~~~aLVVs~E 226 (466)
.+-=+..+++++|+++..
T Consensus 309 ~~~g~~~~Gd~vll~~~G 326 (338)
T PRK09258 309 AEEGFLKPGDRVALLGIG 326 (338)
T ss_pred HHhCCCCCCCEEEEEEec
Confidence 321001246778777754
No 139
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.68 E-value=0.15 Score=51.67 Aligned_cols=88 Identities=14% Similarity=0.195 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE---EEecCCcchHHHHHHHHHHH
Q 039838 134 KEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKN---FNLSGMGCSASALAIDMAQA 210 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~---~dl~~mgCs~~l~aL~lA~~ 210 (466)
+.+.....++++++|+++|++++|||.++... +.+..-..+.+++|++++-.. -+.+++++++...+|+.+..
T Consensus 223 ~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~~ 298 (326)
T PRK05963 223 TEAVRMMSGASQNVLASAAMTPQDIDRFFPHQ----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLANL 298 (326)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHH
Confidence 44666778899999999999999999988743 234556778999999754332 23444455555555543322
Q ss_pred HHhcCCCCeEEEEEe
Q 039838 211 LLKTQKDSDALVLST 225 (466)
Q Consensus 211 ll~~~~~~~aLVVs~ 225 (466)
-=+..+++++|+++.
T Consensus 299 ~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 299 EQPLREGERLLFAAA 313 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 101124677777775
No 140
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=93.61 E-value=0.23 Score=52.25 Aligned_cols=91 Identities=21% Similarity=0.304 Sum_probs=63.5
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCC--------cchHHHHHHHHHHHHH
Q 039838 141 FPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGM--------GCSASALAIDMAQALL 212 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~m--------gCs~~l~aL~lA~~ll 212 (466)
..|++++|+++|++++|||.+.++- ..........+++|++. ..++++|- |++|....+.+...+.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 4799999999999999999998752 12344557778889863 35566652 6777777788888876
Q ss_pred hcCCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEee
Q 039838 213 KTQKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTN 258 (466)
Q Consensus 213 ~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 258 (466)
+.+ .++.|+ ..|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl~--------------------~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGLV--------------------TMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEEE--------------------EEEeeccceeEEEEEe
Confidence 654 344422 2356666677788775
No 141
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=93.51 E-value=0.2 Score=52.59 Aligned_cols=94 Identities=9% Similarity=0.017 Sum_probs=52.9
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCCh--hhHHHHHHhHhhcCccccchHHHHHHHHHHcCCC
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGE--RDIEAALMTLHRFGNQSSSSLWYELAYMEAKERV 417 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~--e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i 417 (466)
.+++++ ++| +. ++|||++-+|-.-....-...+.||+.+ +.+.+ .--+--+||...++=...+.++..+=+-
T Consensus 302 ~~~al~-~Ag-l~---~~DID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~-~GG~la~GHp~gasG~~~~~e~~~qLr~ 375 (400)
T TIGR02430 302 TQKLLA-RAG-LS---IDQFDVIELNEAFAAQALAVLRELGLADDDARVNP-NGGAIALGHPLGASGARLVLTALRQLER 375 (400)
T ss_pred HHHHHH-HhC-CC---HHHCCCcccCcHHHHHHHHHHHHcCCCCCCCeECC-CCchHhccChHHHHHHHHHHHHHHHHHh
Confidence 356677 778 77 5899999998877666666778899854 34421 0011237998777444444443332111
Q ss_pred CCCCEEEE-EeechhhhhcceeEE
Q 039838 418 KKGDRVWL-IGAGTGSKCGSVVLQ 440 (466)
Q Consensus 418 ~~Gd~vll-ia~GsG~~~~s~v~r 440 (466)
+.|...+. ++.|.|. -.+++++
T Consensus 376 ~~~~~g~~~~c~~gG~-g~a~~~e 398 (400)
T TIGR02430 376 SGGRYALCTMCIGVGQ-GIALAIE 398 (400)
T ss_pred cCCCEEEEEEccccCh-hhEEEEE
Confidence 34444333 3344443 3445555
No 142
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=93.36 E-value=0.18 Score=52.93 Aligned_cols=91 Identities=10% Similarity=0.055 Sum_probs=54.3
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCCh--hhHHHHHHhHhhcCccccch---HHHHHHHHHHc
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGE--RDIEAALMTLHRFGNQSSSS---LWYELAYMEAK 414 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~--e~~~~s~~~l~~~GNtssaS---i~~~L~~~~~~ 414 (466)
.+++++ ++| +. .+|||.+-+|-.-....-...+.||+.+ ..+.+ .--.--+||...++ ...++.+.++.
T Consensus 303 ~~~al~-~Ag-l~---~~DId~~ei~D~f~~~~l~~~e~lg~~~~~~pvN~-~GG~la~Ghp~gasG~~~~~e~~~qLr~ 376 (401)
T PRK09050 303 TRKLLA-RLG-LT---IDQFDVIELNEAFAAQGLAVLRQLGLADDDARVNP-NGGAIALGHPLGMSGARLVLTALHQLER 376 (401)
T ss_pred HHHHHH-HcC-CC---HHHCCccccCcHhHHHHHHHHHHcCCCCCCCCEeC-CCchHhcCCchhHHHHHHHHHHHHHHHh
Confidence 356677 778 87 5899999999877655556778899854 33321 00112379999888 55666655542
Q ss_pred CCCCCCCEEEE-EeechhhhhcceeEE
Q 039838 415 ERVKKGDRVWL-IGAGTGSKCGSVVLQ 440 (466)
Q Consensus 415 g~i~~Gd~vll-ia~GsG~~~~s~v~r 440 (466)
+.|.+.+. ++.|.|. -.+++++
T Consensus 377 ---~~~~~g~~~~c~~gG~-g~a~~~e 399 (401)
T PRK09050 377 ---TGGRYALCTMCIGVGQ-GIALAIE 399 (401)
T ss_pred ---cCCCeEEEEEcccccc-eeEEEEE
Confidence 23444333 3333333 3445555
No 143
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=93.18 E-value=0.084 Score=51.90 Aligned_cols=94 Identities=14% Similarity=0.220 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINCS-GFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
+.+++..|...+|+++.++.+.||.+|+.+. .+.-+...+..-+-.-|.++.+++-.+. |+|-+.-.|+-..-.++.+
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEee
Confidence 4569999999999999999999999999764 4555666666666667887778888888 7999999999999999999
Q ss_pred CCCCeEEEEEeccccC
Q 039838 215 QKDSDALVLSTEILST 230 (466)
Q Consensus 215 ~~~~~aLVVs~E~~s~ 230 (466)
|..+.++--+.|.+|.
T Consensus 145 g~~dvivaggvelmsd 160 (465)
T KOG1392|consen 145 GNADVIVAGGVELMSD 160 (465)
T ss_pred CCcCEEEEcceeeccc
Confidence 9877777677788776
No 144
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=93.02 E-value=0.3 Score=51.20 Aligned_cols=96 Identities=6% Similarity=-0.079 Sum_probs=54.9
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCCh--hhHHHHHHhHhhcCccccchHHHHHHHHHHcCCC
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGE--RDIEAALMTLHRFGNQSSSSLWYELAYMEAKERV 417 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~--e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i 417 (466)
.+++|+ ++| +. .+|||++-+|-.-....-...+.||+.. ..+.++ --.--+||...++=...+.++..+=+-
T Consensus 302 ~~~al~-~AG-l~---~~DID~iei~dafa~~~l~~~e~lg~~~~~~pvN~~-GG~la~GHp~gasG~~~v~e~~~qL~~ 375 (400)
T PRK13359 302 TQKLLA-RLG-MT---LDQFDVIELNEAFASQGLAVLRELGLADDDARVNPN-GGAIALGHPLGASGARLVTTALYQLER 375 (400)
T ss_pred HHHHHH-HhC-CC---HHHcCcCccCcHhHHHHHHHHHHcCCCCCCCCEECC-CchhhcCCchhHHHHHHHHHHHHHHhh
Confidence 356677 778 87 5899999998876655566678899843 444210 011137888866666555555443222
Q ss_pred CCCCEEEEEeechhhhhcceeEEE
Q 039838 418 KKGDRVWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 418 ~~Gd~vllia~GsG~~~~s~v~r~ 441 (466)
+.|.+.+...-+.|-.-.+++++.
T Consensus 376 ~~~~~g~~~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 376 TGGRFALCTMCIGVGQGIAIAIER 399 (400)
T ss_pred cCCCeEEEEEcccCCceeEEEEEe
Confidence 344554433333333345566553
No 145
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.99 E-value=0.33 Score=49.18 Aligned_cols=85 Identities=20% Similarity=0.241 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE---EEecCCcchHHHHHHHHHHH
Q 039838 134 KEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKN---FNLSGMGCSASALAIDMAQA 210 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~---~dl~~mgCs~~l~aL~lA~~ 210 (466)
+.+.....++++++|+++|++++|||.++.... ....-..++++||++.+... -+.++++|++...+|+.
T Consensus 226 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~----~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~--- 298 (329)
T PRK07204 226 KLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQA----SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFE--- 298 (329)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHH---
Confidence 345556778999999999999999999997532 11235688999999754333 23444444444445543
Q ss_pred HHhcC---CCCeEEEEEe
Q 039838 211 LLKTQ---KDSDALVLST 225 (466)
Q Consensus 211 ll~~~---~~~~aLVVs~ 225 (466)
+++.+ +++++|+++.
T Consensus 299 ~~~~g~~~~Gd~vll~~~ 316 (329)
T PRK07204 299 AIKQKKVQRGNKILLLGT 316 (329)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 34443 3566666653
No 146
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=92.96 E-value=0.27 Score=49.41 Aligned_cols=84 Identities=15% Similarity=0.208 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCce--EE-EecCCcchHHHHHHHHHHHH
Q 039838 135 EAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIK--NF-NLSGMGCSASALAIDMAQAL 211 (466)
Q Consensus 135 ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~--~~-dl~~mgCs~~l~aL~lA~~l 211 (466)
.......++++++|+++|++++|||.+++.. +.+..-..+++++|++.+-. .+ .+++++|++-+.+|..+.
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~-- 289 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELL-- 289 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHH--
Confidence 4445567789999999999999999999743 24445677999999974322 22 234445555555554433
Q ss_pred HhcC---CCCeEEEEEe
Q 039838 212 LKTQ---KDSDALVLST 225 (466)
Q Consensus 212 l~~~---~~~~aLVVs~ 225 (466)
+.+ +++++|+++.
T Consensus 290 -~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 290 -RTGRIKPGDLLLLVAF 305 (318)
T ss_pred -HcCCCCCCCEEEEEEE
Confidence 333 3566666664
No 147
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=92.95 E-value=2 Score=41.24 Aligned_cols=114 Identities=13% Similarity=0.006 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCC----------------CCCc-H--------HHHHHHHcCCCCCceE
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINCSGFC----------------PSPS-L--------SSIIINKYSMKSDIKN 190 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~----------------~~Ps-~--------a~~I~~~lGl~~~~~~ 190 (466)
...|++.++.+++++. .++|.+|+++..+. ..|. + +.++.-..|. ....
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence 3458888999988653 57888998764321 2342 1 2233333333 3567
Q ss_pred EEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCC
Q 039838 191 FNLSGMGCSASALAIDMAQALLKTQKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQ 261 (466)
Q Consensus 191 ~dl~~mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~ 261 (466)
..|.+ |=.++-.||.-|..+++.+ .+.||||..|-.....|.....+ .....--|.|++|++...
T Consensus 108 tal~a-~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 108 TALAA-GEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEEec-CcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCCC
Confidence 77887 7889999999999999999 89999999999776544432111 112234577788876554
No 148
>PRK06840 hypothetical protein; Validated
Probab=92.53 E-value=0.39 Score=48.88 Aligned_cols=82 Identities=20% Similarity=0.240 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCce--EEEecCCcchHHHHHHHHHHHHHhc
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIK--NFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~--~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.....++++++|+++|++++|||.++... .-+..-..++++||++++-. .-+.+++++++.+.+|..+ ++.
T Consensus 236 ~~~~~~~i~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~ 308 (339)
T PRK06840 236 IPNFLKVIREALRKSGYTPKDIDYLAILH----MKRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQ 308 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC----cCHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHc
Confidence 34567899999999999999999987643 12344467899999974221 1145555555666566433 444
Q ss_pred C---CCCeEEEEEe
Q 039838 215 Q---KDSDALVLST 225 (466)
Q Consensus 215 ~---~~~~aLVVs~ 225 (466)
+ +++++|+++.
T Consensus 309 ~~~~~Gd~ill~~~ 322 (339)
T PRK06840 309 GKLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 3566666654
No 149
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.52 E-value=0.4 Score=48.34 Aligned_cols=85 Identities=18% Similarity=0.177 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE---EEecCCcchHHHHHHHHHHH
Q 039838 134 KEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKN---FNLSGMGCSASALAIDMAQA 210 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~---~dl~~mgCs~~l~aL~lA~~ 210 (466)
+++.....++++++|+++|++++|||.+++.. +.+..-..+++++|++.+-.. -++++++|++...+|..+
T Consensus 221 ~~~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~-- 294 (325)
T PRK12879 221 KWAVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLA-- 294 (325)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHH--
Confidence 34445566789999999999999999998753 234556789999999743222 244555566666666433
Q ss_pred HHhcC---CCCeEEEEEe
Q 039838 211 LLKTQ---KDSDALVLST 225 (466)
Q Consensus 211 ll~~~---~~~~aLVVs~ 225 (466)
++.+ +++++|+++.
T Consensus 295 -~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 295 -LEQGKIKPGDTLLLYGF 311 (325)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 4443 3566666664
No 150
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=92.50 E-value=0.43 Score=49.82 Aligned_cols=93 Identities=9% Similarity=0.024 Sum_probs=56.3
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccch---HHHHHHHHHHcCC
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSS---LWYELAYMEAKER 416 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaS---i~~~L~~~~~~g~ 416 (466)
.+++++ ++| +. ++|||.+=+|-.-...--...+.||++.+++.+|=-. --+||-..+| +..+|.+.++.
T Consensus 291 ~~~al~-~Ag-l~---~~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~-la~GHP~GatG~~~~~~l~~qL~~-- 362 (388)
T PRK06366 291 TRKLLE-KQN-KS---IDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGA-VAIGHPIGNSGSRIIVTLINALKT-- 362 (388)
T ss_pred HHHHHH-HcC-CC---HHHcceeeccchhHHHHHHHHHHhCCCCCccCCCCch-hhhCCCcCCCHHHHHHHHHHHHHh--
Confidence 356777 788 87 5899999999987776667788899987777542222 2256665554 44444444432
Q ss_pred CCCCCEEEE-EeechhhhhcceeEEEe
Q 039838 417 VKKGDRVWL-IGAGTGSKCGSVVLQCL 442 (466)
Q Consensus 417 i~~Gd~vll-ia~GsG~~~~s~v~r~~ 442 (466)
+.|...+. +..|.| .-.+++++..
T Consensus 363 -~~~~~g~~~~c~~gg-~g~a~~~e~~ 387 (388)
T PRK06366 363 -RHMKTGLATLCHGGG-GAHTLTLEMV 387 (388)
T ss_pred -cCCCeEEEEEecccC-hhhEEEEEec
Confidence 22333333 333444 3456666654
No 151
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=92.40 E-value=0.52 Score=47.35 Aligned_cols=77 Identities=17% Similarity=0.154 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCC---CCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMK---SDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~---~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
...++++++|+++|++++|||.++... +......-........++.+ .....-+++++++++++..|..+...++.
T Consensus 206 ~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~ 285 (332)
T cd00825 206 GLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEH 285 (332)
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhc
Confidence 455789999999999999999999854 32222222333344444431 01122366777788888888888777765
Q ss_pred C
Q 039838 215 Q 215 (466)
Q Consensus 215 ~ 215 (466)
+
T Consensus 286 ~ 286 (332)
T cd00825 286 G 286 (332)
T ss_pred C
Confidence 5
No 152
>PRK04262 hypothetical protein; Provisional
Probab=92.27 E-value=0.28 Score=50.26 Aligned_cols=67 Identities=10% Similarity=0.217 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-----EEecCCcchHHHHHHHHHH
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKN-----FNLSGMGCSASALAIDMAQ 209 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~-----~dl~~mgCs~~l~aL~lA~ 209 (466)
...++++++|+++|++++|||.+++.. +.+.+-..++++||++.+-.. -+.+++++++-..+|..+.
T Consensus 210 ~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 210 HIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 566789999999999999999988753 233455678999999744222 2566666666666665554
No 153
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=92.26 E-value=0.34 Score=50.35 Aligned_cols=88 Identities=19% Similarity=0.199 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE---EEecCCcchHHHHHHHHHHH
Q 039838 134 KEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKN---FNLSGMGCSASALAIDMAQA 210 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~---~dl~~mgCs~~l~aL~lA~~ 210 (466)
+.+.....++++++|+++|++++|||.++.... -+.+-..++++||++++-.. -+.+++++++...+|+.+..
T Consensus 276 ~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~ 351 (379)
T PLN02326 276 KFAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVR 351 (379)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHH
Confidence 344555667899999999999999999887532 23344568999999854222 25566666666666665532
Q ss_pred HHhcCCCCeEEEEEe
Q 039838 211 LLKTQKDSDALVLST 225 (466)
Q Consensus 211 ll~~~~~~~aLVVs~ 225 (466)
-=+..+++++|+++.
T Consensus 352 ~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 352 SGKVKKGDVIATAGF 366 (379)
T ss_pred cCCCCCCCEEEEEEE
Confidence 101124566666654
No 154
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=91.61 E-value=0.51 Score=47.25 Aligned_cols=85 Identities=20% Similarity=0.272 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE---EecCCcchHHHHHHHHHHH
Q 039838 134 KEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNF---NLSGMGCSASALAIDMAQA 210 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~---dl~~mgCs~~l~aL~lA~~ 210 (466)
+.+.....++++++|+++|++++|||.++... +.+..-..+.+++|++.+-... +.+++++++...+|..+
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~-- 292 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQ----ANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA-- 292 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 34556778899999999999999999988753 2344456789999997432222 23444455555555443
Q ss_pred HHhcC---CCCeEEEEEe
Q 039838 211 LLKTQ---KDSDALVLST 225 (466)
Q Consensus 211 ll~~~---~~~~aLVVs~ 225 (466)
++.+ +++++|+++.
T Consensus 293 -~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 -IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3333 4678888775
No 155
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=91.46 E-value=0.36 Score=42.05 Aligned_cols=95 Identities=11% Similarity=0.075 Sum_probs=56.2
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCC
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKK 419 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~ 419 (466)
.+++++ +++ ++ .+|||.|=+|-.-....-...+.||++++++.++=-.+. +||...+|=...+.++..+-+-+.
T Consensus 28 ~~~al~-~ag-~~---~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la-~GHP~gasG~r~~~~l~~~L~~~~ 101 (123)
T PF02803_consen 28 ARKALE-RAG-LT---PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALA-LGHPLGASGARLVVELAHQLRRRG 101 (123)
T ss_dssp HHHHHH-HHT------GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHH-H-BHTTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHH-HhC-CC---ccccchhhccchhhhHHHHhhccccccccccCccccccc-ccccccccccchhhhhHHHHHHhc
Confidence 456777 677 77 699999999999888888889999999998865333333 777766654444443333212234
Q ss_pred CCEEEEEeechhhhhcceeEE
Q 039838 420 GDRVWLIGAGTGSKCGSVVLQ 440 (466)
Q Consensus 420 Gd~vllia~GsG~~~~s~v~r 440 (466)
|++.+...-+.|-.-.++++|
T Consensus 102 ~~~gla~~~~ggG~g~a~lle 122 (123)
T PF02803_consen 102 GRYGLAAICAGGGQGSAVLLE 122 (123)
T ss_dssp TSEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhHHhcccceeeEEEEEE
Confidence 666555444444344555554
No 156
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=91.37 E-value=0.61 Score=47.21 Aligned_cols=81 Identities=17% Similarity=0.226 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE---EecCCcchHHHHHHHHHHHHHhc
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNF---NLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~---dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
.....+++++|+++|++++|||.+++... -+.....++++||++.+-... +.++++|++...+|..+ ++.
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~----~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~~ 298 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQA----NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQN 298 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HHh
Confidence 45667789999999999999999987642 234456789999997442222 34555566666666544 343
Q ss_pred C---CCCeEEEEEe
Q 039838 215 Q---KDSDALVLST 225 (466)
Q Consensus 215 ~---~~~~aLVVs~ 225 (466)
+ +++++|+++.
T Consensus 299 g~~~~Gd~vll~~~ 312 (326)
T CHL00203 299 NKIQPGQIIVLSGF 312 (326)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 4567776664
No 157
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.80 E-value=0.76 Score=46.14 Aligned_cols=85 Identities=18% Similarity=0.203 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE---EecCCcchHHHHHHHHHHH
Q 039838 134 KEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNF---NLSGMGCSASALAIDMAQA 210 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~---dl~~mgCs~~l~aL~lA~~ 210 (466)
+.......++.+++|+++|++++|||.++... ..+..-.++.+++|++.+-... +.++++|+..+..|. +
T Consensus 215 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~ 287 (319)
T PRK09352 215 KFAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---E 287 (319)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---H
Confidence 34445567899999999999999999998753 2344557789999997532222 244444444454443 3
Q ss_pred HHhcC---CCCeEEEEEe
Q 039838 211 LLKTQ---KDSDALVLST 225 (466)
Q Consensus 211 ll~~~---~~~~aLVVs~ 225 (466)
+++.+ +++++|+++.
T Consensus 288 ~~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 288 AVRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 33433 3567776664
No 158
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.54 E-value=0.85 Score=47.14 Aligned_cols=86 Identities=14% Similarity=0.135 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHH-cCCCC-Cce----EEEecCCcchHHHHHHHH
Q 039838 134 KEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINK-YSMKS-DIK----NFNLSGMGCSASALAIDM 207 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~-lGl~~-~~~----~~dl~~mgCs~~l~aL~l 207 (466)
+++...+.++++++|+++|++++|||.++..... +.+-..+.++ +|+.. .-. --+.++++|++...+|+.
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 4566778899999999999999999999875321 1122234555 56431 111 235667788888888877
Q ss_pred HHHHHhcCCCCeEEEEEe
Q 039838 208 AQALLKTQKDSDALVLST 225 (466)
Q Consensus 208 A~~ll~~~~~~~aLVVs~ 225 (466)
+.+-+ .+++++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 65432 34567776664
No 159
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=90.05 E-value=1 Score=47.31 Aligned_cols=95 Identities=9% Similarity=-0.038 Sum_probs=50.8
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCCh--hhHHHHHHhHhhcCccccchHHHHHHHHHHcCCC
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGE--RDIEAALMTLHRFGNQSSSSLWYELAYMEAKERV 417 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~--e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i 417 (466)
.+++++ ++| +. .+|||.+=+|-.-....-...+.||+.. +++.++= -+--+||...++=...+.++..+=+-
T Consensus 302 ~~~a~~-~ag-l~---~~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~G-G~la~GhP~gAtG~~~~~el~~qL~~ 375 (401)
T PRK08131 302 IKKALA-RAG-LT---LDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNG-GAIAVGHPLGASGARLALTAARELQR 375 (401)
T ss_pred HHHHHH-HcC-CC---HHHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCCc-cHHhcCCchhhhHHHHHHHHHHHHHh
Confidence 356677 778 77 5899999999876444444668899853 3442111 11247888765544444443332111
Q ss_pred CCCCE-EEEEeechhhhhcceeEEE
Q 039838 418 KKGDR-VWLIGAGTGSKCGSVVLQC 441 (466)
Q Consensus 418 ~~Gd~-vllia~GsG~~~~s~v~r~ 441 (466)
+.|.+ +.-+..|.|.. .+++++.
T Consensus 376 ~~~~~~~~~~~~ggg~g-~a~i~e~ 399 (401)
T PRK08131 376 RGKRYAVVSLCIGVGQG-LAMVIER 399 (401)
T ss_pred cCCCceEEEEEecCChh-hEEEEEe
Confidence 12222 33333444433 4566654
No 160
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=89.99 E-value=1.4 Score=42.38 Aligned_cols=77 Identities=12% Similarity=0.045 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCCcHHHHHHHHcCCC---CCceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINC-SGFCPSPSLSSIIINKYSMK---SDIKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~-s~~~~~Ps~a~~I~~~lGl~---~~~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
...++++++|+++|++++|||.++... .................+.+ .....-.+++++++++...+..+...++.
T Consensus 146 ~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~ 225 (254)
T cd00327 146 GLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEH 225 (254)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhC
Confidence 456789999999999999999988743 22222222222222333331 01222355666677777777666655555
Q ss_pred C
Q 039838 215 Q 215 (466)
Q Consensus 215 ~ 215 (466)
+
T Consensus 226 ~ 226 (254)
T cd00327 226 E 226 (254)
T ss_pred C
Confidence 4
No 161
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=89.33 E-value=0.85 Score=47.88 Aligned_cols=91 Identities=18% Similarity=0.310 Sum_probs=58.2
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHHHH
Q 039838 141 FPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQALL 212 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~ll 212 (466)
..|++++|+++|++++|||.+=++ ..++...-+..+.||+.+ ..+|++| .|++|....+.++..|-
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~----daFa~~~l~~~e~lG~~~--~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~ 376 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELN----EAFASVVLRFMQALDIPH--DKVNVNGGAIAMGHPLGATGAMILGTVLDELE 376 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec----chhhHHHHHHHHHhCCCC--cCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 469999999999999999998764 124444556778888753 2455555 13444555555555554
Q ss_pred hcCCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEee
Q 039838 213 KTQKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTN 258 (466)
Q Consensus 213 ~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 258 (466)
+.+ .++.| .+.|.-|-.+.|+||++
T Consensus 377 ~~~-~~~g~--------------------~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 377 RRG-KRTAL--------------------ITLCVGGGMGIATIIER 401 (402)
T ss_pred hcC-CCeEE--------------------EEEcccCCceeEEEEEe
Confidence 322 23333 33466677778888875
No 162
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=88.68 E-value=1.1 Score=39.10 Aligned_cols=70 Identities=21% Similarity=0.431 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQAL 211 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~l 211 (466)
...|++++|+++|++++|||.+=++- .+-...-...+.+|+.+ ..+|.+| .||+|...-++++..|
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHH
Confidence 35799999999999999999997762 12344456677788753 3455554 2677777788888887
Q ss_pred HhcC
Q 039838 212 LKTQ 215 (466)
Q Consensus 212 l~~~ 215 (466)
-+.+
T Consensus 98 ~~~~ 101 (123)
T PF02803_consen 98 RRRG 101 (123)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 6543
No 163
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=88.03 E-value=0.75 Score=46.75 Aligned_cols=56 Identities=21% Similarity=0.275 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE
Q 039838 132 SIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNF 191 (466)
Q Consensus 132 ~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~ 191 (466)
-.+.+..++.++++++|+++|++++|||.++... .-...-..+++++|++.+-...
T Consensus 217 vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k~~~ 272 (323)
T COG0332 217 VFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEKVVV 272 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHHHhh
Confidence 4567999999999999999999999999998643 2234457789999997543333
No 164
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=87.88 E-value=2.6 Score=43.88 Aligned_cols=68 Identities=4% Similarity=-0.166 Sum_probs=47.6
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCChh------------------hHHHHHHhHhhcCcccc
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGER------------------DIEAALMTLHRFGNQSS 401 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~e------------------~~~~s~~~l~~~GNtss 401 (466)
.+++++ ++| +. ++|||.+-+|......--...+.||+.++ .+.+|=- +--+||...
T Consensus 266 ~~~a~~-~ag-l~---~~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG-~la~Ghp~g 339 (389)
T PRK07516 266 WQRALA-QAG-VT---LDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGG-LKAKGHPIG 339 (389)
T ss_pred HHHHHH-HcC-CC---HHHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCC-cccCCCCcc
Confidence 456777 778 77 58999999999987776677888998864 2211111 234899998
Q ss_pred chHHHHHHHHHH
Q 039838 402 SSLWYELAYMEA 413 (466)
Q Consensus 402 aSi~~~L~~~~~ 413 (466)
+|=...+.++..
T Consensus 340 asG~~~~~e~~~ 351 (389)
T PRK07516 340 ATGVSMHVLAAM 351 (389)
T ss_pred HHHHHHHHHHHH
Confidence 777777766554
No 165
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=87.34 E-value=3 Score=43.58 Aligned_cols=93 Identities=20% Similarity=0.218 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHH
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQA 210 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~ 210 (466)
-...|++++++++|++|+|||++=++- .++...-+..+.||+.. ..+|.+| .||+|....++++.+
T Consensus 286 ~~~~a~~~al~~agl~~~did~~ei~d----~F~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gatG~~~v~e~~~q 359 (387)
T PRK07850 286 GPVQATAKVLEKAGMKIGDIDLVEINE----AFASVVLSWAQVHEPDM--DKVNVNGGAIALGHPVGSTGARLITTALHE 359 (387)
T ss_pred hHHHHHHHHHHHcCCCHHHcCeeeecc----cchHHHHHHHHHcCCCC--CCcCCCCchhhcCCCcchhHHHHHHHHHHH
Confidence 346899999999999999999998751 13333344557888753 3566655 133444555566666
Q ss_pred HHhcCCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEee
Q 039838 211 LLKTQKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTN 258 (466)
Q Consensus 211 ll~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 258 (466)
|-+. ..++.|+ +.|.-|..++|++|++
T Consensus 360 L~~~-~~~~g~~--------------------~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 360 LERT-DKSTALI--------------------TMCAGGALSTGTIIER 386 (387)
T ss_pred HHhc-CCCeEEE--------------------EEccccCceeEEEEEe
Confidence 5432 2334332 3455566777777765
No 166
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=87.21 E-value=1.3 Score=45.47 Aligned_cols=88 Identities=11% Similarity=0.112 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC-Cce----EEEecCCcchHHHHHHHHHHHHH
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSMKS-DIK----NFNLSGMGCSASALAIDMAQALL 212 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl~~-~~~----~~dl~~mgCs~~l~aL~lA~~ll 212 (466)
-..+|++++|+++|++|+|||.|+.. +...+-....+..+.+-+|-.. ..+ .-.++..+.+++...+..+-..+
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~ 314 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAAS 314 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHH
Confidence 45689999999999999999999863 3221111222333444444211 111 11233323334444444444555
Q ss_pred hcC--CCCeEEEEEec
Q 039838 213 KTQ--KDSDALVLSTE 226 (466)
Q Consensus 213 ~~~--~~~~aLVVs~E 226 (466)
+.+ +..++||.++.
T Consensus 315 ~~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 315 RKGYGPGPNVLCHLSD 330 (348)
T ss_pred HcCcCCCCcEEEEecC
Confidence 555 46789998863
No 167
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=86.86 E-value=2.6 Score=44.65 Aligned_cols=35 Identities=0% Similarity=-0.157 Sum_probs=24.3
Q ss_pred HhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcC
Q 039838 341 KGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLK 380 (466)
Q Consensus 341 ~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lg 380 (466)
+++++ ++| +. .+|||.+=+|-.-...--...+.||
T Consensus 318 ~~al~-~Ag-l~---~~Did~~Ei~daFa~~~l~~~e~lg 352 (430)
T TIGR02446 318 PLALQ-RAG-LA---LSDLTLIDMHEAFAAQTLANVQMFA 352 (430)
T ss_pred HHHHH-HcC-CC---HHHCCEEEeccccHHHHHHHHHHhc
Confidence 56777 778 77 5899999999985444334445554
No 168
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=86.85 E-value=2.3 Score=45.02 Aligned_cols=25 Identities=0% Similarity=-0.033 Sum_probs=19.3
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCH
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGR 369 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~ 369 (466)
.+++++ ++| +. .+|||.+-+|-.-.
T Consensus 313 ~~~al~-~aG-l~---~~did~~ei~daFa 337 (426)
T PRK08170 313 ATPLLQ-RHG-LT---LEDLDLWEINEAFA 337 (426)
T ss_pred HHHHHH-HcC-CC---HHHcCEEEecchhH
Confidence 356677 778 87 58999999998743
No 169
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=86.63 E-value=2.3 Score=43.95 Aligned_cols=83 Identities=13% Similarity=0.184 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCC-----CCceEE-EecCCcchHHHHHHHHHH
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMK-----SDIKNF-NLSGMGCSASALAIDMAQ 209 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~-----~~~~~~-dl~~mgCs~~l~aL~lA~ 209 (466)
-..-...|+++.+++.|.+|+|.|.+++-. |.|-+....+..+|.+ +..... .++++.|.+...+|--
T Consensus 207 Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las-- 280 (377)
T COG3425 207 YFKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLAS-- 280 (377)
T ss_pred HHHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHH--
Confidence 344677899999999999999999999864 4555566666666655 333333 5889899888866633
Q ss_pred HHHhcC-CCCeEEEEE
Q 039838 210 ALLKTQ-KDSDALVLS 224 (466)
Q Consensus 210 ~ll~~~-~~~~aLVVs 224 (466)
-|=++. +++++|+++
T Consensus 281 ~L~~a~~~G~rIl~~S 296 (377)
T COG3425 281 LLDNAKLPGDRILLFS 296 (377)
T ss_pred HHhhcCCCCCEEEEEe
Confidence 332333 455555543
No 170
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=86.26 E-value=1.4 Score=45.98 Aligned_cols=50 Identities=16% Similarity=0.179 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG 195 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~ 195 (466)
...|++++|+++|++|+|||.+-++- ..+...-+..+.||+.. ..++++|
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~~--~~vn~~G 342 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWDA--AKVNVNG 342 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCCC--ccCCcCC
Confidence 35799999999999999999987641 13444556677888742 2344444
No 171
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=85.76 E-value=1.8 Score=44.55 Aligned_cols=88 Identities=10% Similarity=0.135 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCc------eEEEecCCcchHHHHHH
Q 039838 134 KEAQMVLFPVIENLLSKV--QISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDI------KNFNLSGMGCSASALAI 205 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~a--gi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~------~~~dl~~mgCs~~l~aL 205 (466)
+.+.....++++++|+++ |++++|||.+++... .+..-..++++||++++- ..-+.+++++++...+|
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~----~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPG----GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECCC----ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 345556778899999999 999999999987532 223445689999997432 13367777777777777
Q ss_pred HHHHHHHhcCCCCeEEEEEe
Q 039838 206 DMAQALLKTQKDSDALVLST 225 (466)
Q Consensus 206 ~lA~~ll~~~~~~~aLVVs~ 225 (466)
+.+.+-=+..+++++|+++.
T Consensus 331 ~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHhCCCCCCCEEEEEEE
Confidence 76643211124567776664
No 172
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=85.56 E-value=1.5 Score=46.09 Aligned_cols=93 Identities=15% Similarity=0.294 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-ceEEEecCCcc---------hHHHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSD-IKNFNLSGMGC---------SASALAIDMAQ 209 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~-~~~~dl~~mgC---------s~~l~aL~lA~ 209 (466)
...|++++|+++|++|+|||++-++- .++...-+..+.||+.++ ...+|.+| |. +|...-++++.
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~d----~f~~~~l~~~e~lg~~~~~~~~vN~~G-G~la~Ghp~gatG~~~v~e~~~ 374 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELNE----AFAAQVLAVLKEWGFGADDEERLNVNG-SGISLGHPVGATGGRILATLLR 374 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeecc----HHHHHHHHHHHHhCcCcccCCCcCCCC-CHHhhCCChhhhHHHHHHHHHH
Confidence 46799999999999999999987541 133344455667776431 01355555 43 34334445555
Q ss_pred HHHhcCCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEee
Q 039838 210 ALLKTQKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTN 258 (466)
Q Consensus 210 ~ll~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 258 (466)
+|-+. ..++. +.+.|.-|..+.|+||++
T Consensus 375 qL~~~-~~~~g--------------------l~~~c~~gg~g~a~~~e~ 402 (404)
T PRK06205 375 ELQRR-QARYG--------------------LETMCIGGGQGLAAVFER 402 (404)
T ss_pred HHHhc-CCCeE--------------------EEEEeccCChhhEEEEEe
Confidence 54332 12233 334566677778888875
No 173
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=85.18 E-value=2.6 Score=43.58 Aligned_cols=70 Identities=17% Similarity=0.209 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEec--------CCcchHHHHHHHHHHH
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLS--------GMGCSASALAIDMAQA 210 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~--------~mgCs~~l~aL~lA~~ 210 (466)
-...|++++|+++|++++|||.+..+- ..........+.||+.+ ..++.+ -.|++|......+..+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~q 332 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQ 332 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHH
Confidence 456799999999999999999997742 23344455677888853 234443 2366777777777777
Q ss_pred HHhc
Q 039838 211 LLKT 214 (466)
Q Consensus 211 ll~~ 214 (466)
+-+.
T Consensus 333 l~~~ 336 (361)
T PRK06690 333 AKRE 336 (361)
T ss_pred HHHh
Confidence 7553
No 174
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=85.12 E-value=3 Score=43.55 Aligned_cols=67 Identities=22% Similarity=0.361 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQAL 211 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~l 211 (466)
...|++++|+++|++|+|||.+=+.- ..+...-+..+.||+.+ ..+|.+| .||+|...-++++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDP--ETVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCc--cccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 46799999999999999999987642 24455566778888753 2355544 2566666677777776
Q ss_pred H
Q 039838 212 L 212 (466)
Q Consensus 212 l 212 (466)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 4
No 175
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=84.68 E-value=3.8 Score=42.90 Aligned_cols=87 Identities=11% Similarity=-0.015 Sum_probs=52.9
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCChh------------------hHHHHHHhHhhcCcccc
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGER------------------DIEAALMTLHRFGNQSS 401 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~e------------------~~~~s~~~l~~~GNtss 401 (466)
.+++++ ++| ++ .+|||.+-+|-.-...--...+.||+.+. .+.++ --+--+||...
T Consensus 282 a~~a~~-~Ag-i~---~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~-GG~la~Ghp~g 355 (403)
T PRK06289 282 VLDAYR-RAG-VG---LDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPS-GGLIGGGHPVG 355 (403)
T ss_pred HHHHHH-HcC-CC---HHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCC-CCccccCCCcc
Confidence 456777 778 87 58999999999977777777888998763 11100 00122788776
Q ss_pred chHHHHHHHHHHc--C-----CCCCCCEEEEEeechhh
Q 039838 402 SSLWYELAYMEAK--E-----RVKKGDRVWLIGAGTGS 432 (466)
Q Consensus 402 aSi~~~L~~~~~~--g-----~i~~Gd~vllia~GsG~ 432 (466)
++=...+.++..+ | .++..+..+..+.|.|.
T Consensus 356 atG~~~~~e~~~QLrg~ag~~Qv~~~~~~l~~~~gg~~ 393 (403)
T PRK06289 356 ASGVRMLLDAAKQVTGTAGDYQVEGAKTFGTLNIGGST 393 (403)
T ss_pred chHHHHHHHHHHHHhccccCccCCchheEEEEecCccc
Confidence 6666555554443 1 12223455555556543
No 176
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=83.68 E-value=2.5 Score=44.35 Aligned_cols=93 Identities=15% Similarity=0.204 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHH
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQA 210 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~ 210 (466)
-...|++++|+++|++|+|||++-.+ ..+....-...+.||+.. ..+|.+| .|++|....+.++.+
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~----D~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~ 371 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELN----EAFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHG 371 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeC----cHHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHH
Confidence 34689999999999999999998643 123344455667788752 2334433 144555555555555
Q ss_pred HHhcCCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEee
Q 039838 211 LLKTQKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTN 258 (466)
Q Consensus 211 ll~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 258 (466)
|-..+ .++.| .+.|.-|-.++|+||++
T Consensus 372 L~~~~-~~~g~--------------------~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 372 LRRTN-LKYGM--------------------VTMCVGTGMGAAGIFER 398 (399)
T ss_pred HHhcC-CCeEE--------------------EEEcccCCceeEEEEEe
Confidence 54322 23332 23455666677777764
No 177
>PLN03169 chalcone synthase family protein; Provisional
Probab=83.20 E-value=3.7 Score=42.96 Aligned_cols=89 Identities=10% Similarity=0.157 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE------EEecCCcchHHHHHHHHH
Q 039838 135 EAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKN------FNLSGMGCSASALAIDMA 208 (466)
Q Consensus 135 ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~------~dl~~mgCs~~l~aL~lA 208 (466)
.+..-....++++|+++|++++|||.+.+...+. -+..-..++++||++++-.. -+.++|++++...+|+.+
T Consensus 278 ~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~--n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~ 355 (391)
T PLN03169 278 KIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPG--GPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM 355 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCC--CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH
Confidence 3445556678999999999999999443322122 24556778999999854322 367888888888888766
Q ss_pred HHH--Hh-cCCCCeEEEEEe
Q 039838 209 QAL--LK-TQKDSDALVLST 225 (466)
Q Consensus 209 ~~l--l~-~~~~~~aLVVs~ 225 (466)
..- ++ .++++++|+++.
T Consensus 356 ~~~~~~~~~~~gd~~ll~af 375 (391)
T PLN03169 356 REELKKKGEEDEEWGLILAF 375 (391)
T ss_pred HHhhcccCCCCCcEEEEEEE
Confidence 431 21 123466666553
No 178
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=83.13 E-value=1.9 Score=45.09 Aligned_cols=92 Identities=15% Similarity=0.224 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQAL 211 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~l 211 (466)
...|++++|+++|++|+|||.+=++- ......-+-.+.||+.+ ..+|++| .|++|....++++.+|
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ei~d----~fa~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL 370 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLFEINE----AFAVVTMAAMKEHGLPH--EKVNVNGGACALGHPIGASGARILVTLIGAL 370 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEehhh----HHHHHHHHHHHHhCCCc--ccCCcCCChHHhcccHHHHHHHHHHHHHHHH
Confidence 35799999999999999999985431 11122223346778752 3445554 1344555555566555
Q ss_pred HhcCCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEee
Q 039838 212 LKTQKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTN 258 (466)
Q Consensus 212 l~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 258 (466)
-..+ .++. +.+.|.-|-.++|+||++
T Consensus 371 ~~~~-g~~~--------------------v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 371 RARG-GKRG--------------------VASLCIGGGEATAMGIEL 396 (397)
T ss_pred HhcC-CCeE--------------------EEEEccccchhhEEEEEe
Confidence 3321 2222 233466677777777764
No 179
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=82.91 E-value=3.4 Score=44.65 Aligned_cols=79 Identities=19% Similarity=0.270 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCC-ceEEEecCCcchH--------HHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSMKSD-IKNFNLSGMGCSA--------SALAIDMAQ 209 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl~~~-~~~~dl~~mgCs~--------~l~aL~lA~ 209 (466)
+..|++++++++|++++|||++=+. | +|....+-.+.||+.++ -..++++| |.-+ ++.++--+.
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elydc-----F~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v 367 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYSC-----FPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMV 367 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEeccC-----CHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHH
Confidence 3469999999999999999998753 4 45556677789998643 23566665 5432 344444344
Q ss_pred HHHhcCCCCeEEEEE
Q 039838 210 ALLKTQKDSDALVLS 224 (466)
Q Consensus 210 ~ll~~~~~~~aLVVs 224 (466)
..|+..+.+++||.+
T Consensus 368 ~QLRg~~~~~gLv~~ 382 (498)
T PRK08257 368 ERLRANPGRRGLVTA 382 (498)
T ss_pred HHHhhcCCCEEEEEC
Confidence 444444455666543
No 180
>PRK09051 beta-ketothiolase; Provisional
Probab=82.71 E-value=2.8 Score=43.85 Aligned_cols=68 Identities=13% Similarity=0.304 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCC--------cchHHHHHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGM--------GCSASALAIDMAQAL 211 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~m--------gCs~~l~aL~lA~~l 211 (466)
...|++++|+++|++|+|||++=++- ..+...-+..+.||+.+ ..+|.+|- |++|....+.++++|
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~--~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L 367 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDP--AKVNPNGSGISLGHPVGATGAIITVKALYEL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCc--cccCCCccHHHhcchHHHHHHHHHHHHHHHH
Confidence 46799999999999999999987641 24455566778899852 45666651 233444445555555
Q ss_pred Hh
Q 039838 212 LK 213 (466)
Q Consensus 212 l~ 213 (466)
-+
T Consensus 368 ~~ 369 (394)
T PRK09051 368 QR 369 (394)
T ss_pred Hh
Confidence 33
No 181
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=81.61 E-value=4.6 Score=40.38 Aligned_cols=91 Identities=14% Similarity=0.150 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC-Cce------EEEecCCcchHHHHH
Q 039838 132 SIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKS-DIK------NFNLSGMGCSASALA 204 (466)
Q Consensus 132 ~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~-~~~------~~dl~~mgCs~~l~a 204 (466)
..+.+......+++++|++.|++ +|||.++...... +..-..+.++++++. ++. .-++++++|++...+
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 34566778889999999999999 9999887653211 155677889999742 111 234566666666666
Q ss_pred HHHHHHHHhcCCCCeEEEEEec
Q 039838 205 IDMAQALLKTQKDSDALVLSTE 226 (466)
Q Consensus 205 L~lA~~ll~~~~~~~aLVVs~E 226 (466)
|..+-.--+-.+++++|+++.-
T Consensus 293 L~~~~~~~~~~~Gd~vl~~~~G 314 (324)
T cd00827 293 LASLLESGKLKAGDRVLLFSYG 314 (324)
T ss_pred HHHHHhcCCCCCCCEEEEEEec
Confidence 6554321111246778877754
No 182
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=81.08 E-value=3.5 Score=43.36 Aligned_cols=92 Identities=18% Similarity=0.264 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQAL 211 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~l 211 (466)
...|++++++++|++|+|||.+=.. ...+...-+-.+.||+.++ .+|.+| .||+|....++++.+|
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei~----d~f~~~~l~~le~lg~~~~--pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL 378 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEIN----EAFAAQVLPSARELGIDED--KLNVSGGAIALGHPFGMTGARITTTLLNNL 378 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhh----hHHHHHHHHHHHHhCCCcc--ccCCCCChHhhcCcHHHHHHHHHHHHHHHH
Confidence 4579999999999999999998432 1122333444577776421 233332 1555666666666666
Q ss_pred HhcCCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEee
Q 039838 212 LKTQKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTN 258 (466)
Q Consensus 212 l~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 258 (466)
-+ .+.++.|+ ..|.-|..++|+||++
T Consensus 379 ~~-~~~~~g~~--------------------~~~~~gg~g~a~~~e~ 404 (406)
T PRK07851 379 QT-HDKTFGLE--------------------TMCVGGGQGMAMVLER 404 (406)
T ss_pred Hh-cCCCeEEE--------------------EEccccChhhEEEEEe
Confidence 43 23334332 3456667777777775
No 183
>PLN02287 3-ketoacyl-CoA thiolase
Probab=79.86 E-value=4.1 Score=43.47 Aligned_cols=96 Identities=15% Similarity=0.182 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQAL 211 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~l 211 (466)
...|++++|+++|++|+|||.+=++ .......-+-.+.||+.+ ..+|++| .|++|....+.++.+|
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~--~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL 406 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEM 406 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCc--cccCCCCcHHhccCcHHHHHHHHHHHHHHHH
Confidence 4689999999999999999998554 112222333456777742 3444443 2556666666666666
Q ss_pred HhcCC-CCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEeecCC
Q 039838 212 LKTQK-DSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTNKKQ 261 (466)
Q Consensus 212 l~~~~-~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~~~~ 261 (466)
-+.+. .++. +.+.|.-|--++|+||++.+.
T Consensus 407 ~~~~~~~~~g--------------------l~~~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 407 KRRGKDCRFG--------------------VVSMCIGTGMGAAAVFERGDS 437 (452)
T ss_pred HhcCCCCCee--------------------EEEEccccCceeEEEEEecCc
Confidence 54321 0232 233566777788899988654
No 184
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=79.75 E-value=4.5 Score=42.01 Aligned_cols=73 Identities=14% Similarity=0.131 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCC--CcHHHHHHHHcCCCCC-----------ceEEEecCCcchH
Q 039838 134 KEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPS--PSLSSIIINKYSMKSD-----------IKNFNLSGMGCSA 200 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~--Ps~a~~I~~~lGl~~~-----------~~~~dl~~mgCs~ 200 (466)
+...+...++.+++|+++|++++|||.+++.. ++... .+. .++.++++.+.+ ...=.+++++|++
T Consensus 201 ~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~-p~~~~~~k~~-~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas 278 (379)
T TIGR01835 201 EQYLNAFENAWNDYAKRTGLSLADFAAFCFHV-PFTKMGLKAL-RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGS 278 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHcCEEEECC-CCCcHHHHHH-HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHH
Confidence 34555667889999999999999999998754 22222 222 235566665421 1233677777777
Q ss_pred HHHHHHHH
Q 039838 201 SALAIDMA 208 (466)
Q Consensus 201 ~l~aL~lA 208 (466)
...+|.-+
T Consensus 279 ~~l~L~~~ 286 (379)
T TIGR01835 279 LYLGLASL 286 (379)
T ss_pred HHHHHHHH
Confidence 77776544
No 185
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=79.63 E-value=5.2 Score=41.19 Aligned_cols=71 Identities=11% Similarity=0.134 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-E--E-ecCCcchHHHHHHHHH
Q 039838 134 KEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKN-F--N-LSGMGCSASALAIDMA 208 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~-~--d-l~~mgCs~~l~aL~lA 208 (466)
+.+....-.+++++|+++|++++|||.+++.. .-+..-..+.++||++++-.. . + .++++.++...+|+-+
T Consensus 238 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ----~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~ 312 (353)
T PRK12880 238 NMALECEPKSFKEILEFSKVDEKDIAFHLFHQ----SNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL 312 (353)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH
Confidence 34555667789999999999999999999864 233455789999999853222 1 2 4455555666666533
No 186
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=79.27 E-value=5.6 Score=41.59 Aligned_cols=39 Identities=5% Similarity=-0.110 Sum_probs=30.2
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCCh
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGE 383 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~ 383 (466)
.+++++ ++| +. .+|||.+=+|-.-...--...+.||+.+
T Consensus 275 ~~~al~-~Ag-i~---~~DID~~Ei~d~Fa~~~l~~~e~lgl~~ 313 (393)
T cd00826 275 ARKALE-KAG-LG---IGDLDLIEAHDAFAANACATNEALGLCP 313 (393)
T ss_pred HHHHHH-HcC-CC---HHHcCeeehhhhhHHHHHHHHHHhCCCc
Confidence 456777 778 77 5899999999987666566678899876
No 187
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=78.99 E-value=3.3 Score=43.34 Aligned_cols=93 Identities=16% Similarity=0.288 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHH
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQA 210 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~ 210 (466)
-...|++++|+++|++|+|||.+-++- ..+...-+-.+.||+.+ ..+|.+| .|++|....++++.+
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~q 363 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELNE----AFASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHE 363 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCC----HHHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHH
Confidence 346799999999999999999987541 12333334446778742 2334443 245555566666666
Q ss_pred HHhcCCCCeEEEEEeccccCCCCCCCCcccccccccccccceeEEEee
Q 039838 211 LLKTQKDSDALVLSTEILSTGWYSGNEKPKLLLNCLFRMGSVAVLLTN 258 (466)
Q Consensus 211 ll~~~~~~~aLVVs~E~~s~~~~~~~dr~~l~~~~lfgDGAaA~lLs~ 258 (466)
|-+.+ .++.| .+.|.-|..+.|+|+++
T Consensus 364 L~~~~-~~~g~--------------------~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 364 MKRRN-EQFGI--------------------VTMCIGGGMGAAGVFEL 390 (391)
T ss_pred HHhcC-CCeEE--------------------EEEccccChhhEEEEEe
Confidence 65432 23332 23455566677777764
No 188
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=78.28 E-value=7.9 Score=39.85 Aligned_cols=44 Identities=11% Similarity=0.076 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKS 186 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~ 186 (466)
-...|++++|+++|++++|||++=+.- ..+...-+..+.||+.+
T Consensus 252 ~~~~a~~~al~~Agl~~~did~~ei~d----~F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 252 AARLAARRAYKMAGITPDDIDVAELYD----CFTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCC
Confidence 345799999999999999999987652 24455566777888764
No 189
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=78.02 E-value=4.1 Score=42.62 Aligned_cols=68 Identities=21% Similarity=0.305 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQAL 211 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~l 211 (466)
...|++++++++|++|+|||++-++ ...+...-+..+.||+.+ ..+|.+| .|++|....++++.+|
T Consensus 293 ~~~a~~~al~~agl~~~did~~e~~----d~f~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL 366 (393)
T PRK08235 293 PGYAINALLEKTGKTVEDIDLFEIN----EAFAAVALASTEIAGIDP--EKVNVNGGAVALGHPIGASGARIIVTLIHEL 366 (393)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhc----chhHHHHHHHHHHhCCCc--ccCCcCCchHHhCCcHHHHHHHHHHHHHHHH
Confidence 4579999999999999999998643 123444556677888742 2344444 1455666666666666
Q ss_pred Hh
Q 039838 212 LK 213 (466)
Q Consensus 212 l~ 213 (466)
-.
T Consensus 367 ~~ 368 (393)
T PRK08235 367 KR 368 (393)
T ss_pred Hh
Confidence 43
No 190
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=77.74 E-value=4.7 Score=42.09 Aligned_cols=41 Identities=17% Similarity=0.278 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSM 184 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl 184 (466)
...|++++++++|++|+|||.+=++- .+....-+..+.||+
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~d----aFa~~~l~~~e~lg~ 322 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELNE----AFAAQALPCLKDLGL 322 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEcc----ccHHHHHHHHHHcCC
Confidence 46789999999999999999886641 133444555677886
No 191
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=77.56 E-value=5.8 Score=41.47 Aligned_cols=54 Identities=22% Similarity=0.354 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcch
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCS 199 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs 199 (466)
....|++++++++|++|+|||++=++- .++...-+..+.||+.+. .+|.+| |.-
T Consensus 289 ~~~~a~~~a~~~agl~~~Did~~Ei~d----~Fa~~~l~~~e~lG~~~~--pvN~~G-G~l 342 (390)
T PRK06504 289 APLPATERALKKAGMKIDDIDLYEVNE----AFASVPLAWLKATGADPE--RLNVNG-GAI 342 (390)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHhCCCCC--CcCCCC-cHH
Confidence 345699999999999999999986641 134445567788998643 466666 443
No 192
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=77.27 E-value=9 Score=36.96 Aligned_cols=86 Identities=14% Similarity=0.225 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-cHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcCC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP-SLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQK 216 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P-s~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~~ 216 (466)
.....-++++|++++++++|||.+-++-.|..-.| +..+.+++-+.+--+.+-..++ .|-|-+ ++.+- +....
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigHI---EMGR~-iTgA~ 124 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGHI---EMGRE-ITGAQ 124 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhhh---hhcce-eccCC
Confidence 34566678999999999999999988877776666 3334455555432245556666 376543 33322 22223
Q ss_pred CCeEEEEEecccc
Q 039838 217 DSDALVLSTEILS 229 (466)
Q Consensus 217 ~~~aLVVs~E~~s 229 (466)
+-.+|-||+-+.-
T Consensus 125 nPvvLYvSGGNTQ 137 (336)
T KOG2708|consen 125 NPVVLYVSGGNTQ 137 (336)
T ss_pred CCEEEEEeCCceE
Confidence 5678888876643
No 193
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=77.22 E-value=5 Score=41.85 Aligned_cols=70 Identities=20% Similarity=0.377 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-ceEEEecC--------CcchHHHHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSD-IKNFNLSG--------MGCSASALAIDMAQA 210 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~-~~~~dl~~--------mgCs~~l~aL~lA~~ 210 (466)
...|++++++++|++|+|||.+=++- .++...-+-.+.||+-+. -..+|.+| .||+|......+++.
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d----~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~ 359 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNE----AFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNL 359 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHH
Confidence 35788999999999999999987641 234445556677887321 02344444 255665555566655
Q ss_pred HHh
Q 039838 211 LLK 213 (466)
Q Consensus 211 ll~ 213 (466)
|-+
T Consensus 360 L~~ 362 (387)
T PRK08947 360 MER 362 (387)
T ss_pred HHh
Confidence 543
No 194
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=76.78 E-value=3 Score=48.72 Aligned_cols=124 Identities=21% Similarity=0.266 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCE----EEEeec-CC-----CCCC----------cHHHHHHHHcCC--CCCceEEEecC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDI----LIINCS-GF-----CPSP----------SLSSIIINKYSM--KSDIKNFNLSG 195 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~----LI~~~s-~~-----~~~P----------s~a~~I~~~lGl--~~~~~~~dl~~ 195 (466)
.|..+|--+|+-++|++|.|... +.+.|| +. ...| ..-+|.+|++.. .-.-++|.+..
T Consensus 89 RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~Dt 168 (2376)
T KOG1202|consen 89 RLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVDT 168 (2376)
T ss_pred HHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhhhh
Confidence 47888999999999999987642 333332 11 1111 123566666532 11246777776
Q ss_pred CcchHHHHHHHHHHHHHhcCCCCeEEEEEeccccCCC---C---------CCCCcc--cccccccccccceeEEEeecCC
Q 039838 196 MGCSASALAIDMAQALLKTQKDSDALVLSTEILSTGW---Y---------SGNEKP--KLLLNCLFRMGSVAVLLTNKKQ 261 (466)
Q Consensus 196 mgCs~~l~aL~lA~~ll~~~~~~~aLVVs~E~~s~~~---~---------~~~dr~--~l~~~~lfgDGAaA~lLs~~~~ 261 (466)
+|++.+.||+.|.+-++.+..++|+|-++-.+-... + .+.-+. .--..+.=.||.+|++|.++..
T Consensus 169 -acsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk~~ 247 (2376)
T KOG1202|consen 169 -ACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRKSL 247 (2376)
T ss_pred -hhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEehhHH
Confidence 899999999999999999999999998887754321 1 011010 0012345579999999998765
Q ss_pred C
Q 039838 262 A 262 (466)
Q Consensus 262 ~ 262 (466)
.
T Consensus 248 A 248 (2376)
T KOG1202|consen 248 A 248 (2376)
T ss_pred H
Confidence 4
No 195
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=76.33 E-value=14 Score=39.13 Aligned_cols=96 Identities=7% Similarity=0.045 Sum_probs=46.9
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHH-HHHH--HHHcCCChh---------hHHHHHHhHh----hcCccccch
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPV-IREI--AKNLKLGER---------DIEAALMTLH----RFGNQSSSS 403 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~v-l~~l--~~~Lgl~~e---------~~~~s~~~l~----~~GNtssaS 403 (466)
.+++++ ++| ++ .+|||.+=+|-.-... +-++ .+.+|+-+. .+.....|.. -+||...+|
T Consensus 315 ~~~a~~-~AG-l~---~~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gAT 389 (427)
T PRK09268 315 VPRLLA-RNG-LT---LQDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAAT 389 (427)
T ss_pred HHHHHH-HcC-CC---HHHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccc
Confidence 356677 678 77 5899999999875433 2222 133333210 0000012222 268887655
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEE
Q 039838 404 LWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQ 440 (466)
Q Consensus 404 i~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r 440 (466)
=...+.++..+=+-+.|.+.+...-+.|-.-.+++++
T Consensus 390 G~~~v~e~~~QL~~~~~~~gl~~~c~~gG~g~a~~~e 426 (427)
T PRK09268 390 GGRIVATLAKLLAEKGSGRGLISICAAGGQGVTAILE 426 (427)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEEEcccCchheEEEEe
Confidence 5544444444322234555554333333333445554
No 196
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=76.28 E-value=8.8 Score=39.91 Aligned_cols=42 Identities=19% Similarity=0.323 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMK 185 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~ 185 (466)
...|++++++++|++|+|||.+-.. + ..+....+..+.||+.
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~---d-~f~~~~~~~~e~lg~~ 328 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEIN---E-AFAAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEee---c-hhHHHHHHHHHHhCCC
Confidence 4579999999999999999988653 1 1123344556778874
No 197
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=75.63 E-value=6.7 Score=40.83 Aligned_cols=49 Identities=27% Similarity=0.411 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 039838 141 FPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG 195 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~ 195 (466)
..|++++++++|++|+|||.+-+.- ..+...-+..+.||+. ...++.+|
T Consensus 289 ~~a~~~a~~~Agi~~~did~~e~~d----~fa~~~~~~~e~lG~~--~~pvn~~G 337 (386)
T TIGR01930 289 VPAIPKALKKAGLSISDIDLFEINE----AFAAQVLACIKELGLD--LEKVNVNG 337 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCeeehcc----hhHHHHHHHHHHhCCC--hhhcCCCC
Confidence 5799999999999999999985431 1223334455788874 23455554
No 198
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=75.22 E-value=8.9 Score=36.81 Aligned_cols=57 Identities=19% Similarity=0.279 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-cHHHHHHHHcCCCCCceEEEecC
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINCSGFCPSP-SLSSIIINKYSMKSDIKNFNLSG 195 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P-s~a~~I~~~lGl~~~~~~~dl~~ 195 (466)
.....++++|.++|++.+|+|.|+|++.|+..+- -.+.-+++-|.+..+++.+.++.
T Consensus 40 ~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 40 RLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 6778899999999999999999999987765543 34444555566555678887875
No 199
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=74.48 E-value=5.3 Score=38.03 Aligned_cols=41 Identities=32% Similarity=0.342 Sum_probs=28.9
Q ss_pred cCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcc
Q 039838 396 FGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGS 436 (466)
Q Consensus 396 ~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s 436 (466)
.|+-.+.|.|...+.+++.=.+++|++|+=+|.|+|+....
T Consensus 49 i~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAl 89 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAAL 89 (209)
T ss_dssp EETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHH
T ss_pred ecceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHH
Confidence 45557778888888888877799999999999999986553
No 200
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=73.78 E-value=17 Score=38.71 Aligned_cols=39 Identities=8% Similarity=-0.102 Sum_probs=31.4
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCCh
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGE 383 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~ 383 (466)
.+++++ ++| +. .+|||.+=+|-.-...--...+.||+.+
T Consensus 315 ~~~a~~-~AG-l~---~~DiD~~Ei~daFa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 315 AQKALS-MAG-VK---PSDLQVAEVHDCFTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHH-HcC-CC---HHHCcEeeecccChHHHHHHHHHcCCCC
Confidence 456777 778 87 5899999999987666667778899886
No 201
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=72.73 E-value=12 Score=39.02 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSM 184 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl 184 (466)
...|++++++++|++++|||.+-..- . .+....+..+.||+
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d---~-ft~~~~~~~e~lgl 300 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHD---C-FTIAEILAYEDLGF 300 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC---C-CcHHHHHHHHHcCC
Confidence 45799999999999999999987641 1 11244556777776
No 202
>PRK05790 putative acyltransferase; Provisional
Probab=72.11 E-value=11 Score=39.42 Aligned_cols=68 Identities=19% Similarity=0.367 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQAL 211 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~l 211 (466)
...|++++++++|++|+|||.+-+.- ......-+..+.||+.+ ..+|.+| .|++|....++++++|
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~l~~~e~lg~~~--~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL 366 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINE----AFAAQALAVEKELGLDP--EKVNVNGGAIALGHPIGASGARILVTLLHEM 366 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCh--hhcCCCcchhhhCcchhhhHHHHHHHHHHHH
Confidence 35799999999999999999986531 13334455677888641 2334433 2455556666666665
Q ss_pred Hh
Q 039838 212 LK 213 (466)
Q Consensus 212 l~ 213 (466)
-.
T Consensus 367 ~~ 368 (393)
T PRK05790 367 KR 368 (393)
T ss_pred Hh
Confidence 44
No 203
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=71.95 E-value=7.5 Score=40.68 Aligned_cols=67 Identities=21% Similarity=0.376 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHH--HHHcCCCCCceEEEecC--------CcchHHHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSII--INKYSMKSDIKNFNLSG--------MGCSASALAIDMAQ 209 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I--~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~ 209 (466)
...|++++|+++|++|+|||.+=++ .+-....+ .+.||++ ...+|++| .|++|....+.++.
T Consensus 292 ~~~a~~~Al~~AGl~p~DID~~ei~------dafa~~~l~~~~~l~~~--~~~vN~sGg~~a~GHplgAtG~~~~~~~~~ 363 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIEVN------EAFAAQSIYVNREMKWD--MEKVNINGGAIAIGHPIGASGGRVLITLIH 363 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehh------hHHHHHHHHHHhhhCCC--ccccCCCCchHhhCCcHHHHHHHHHHHHHH
Confidence 4679999999999999999998753 11111112 3445543 12344443 25666667777777
Q ss_pred HHHhc
Q 039838 210 ALLKT 214 (466)
Q Consensus 210 ~ll~~ 214 (466)
+|-+.
T Consensus 364 qL~~~ 368 (392)
T PRK06633 364 GLRRA 368 (392)
T ss_pred HHHhc
Confidence 76553
No 204
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=71.94 E-value=3.8 Score=42.89 Aligned_cols=68 Identities=16% Similarity=0.169 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQAL 211 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~l 211 (466)
...|++++|+++|++|+|||.+-.+- ......-+-.+.||+.+ ..+|++| .|++|.-..+.+++.|
T Consensus 292 ~~~a~~~al~~agl~~~Did~~ei~e----afa~~~l~~~e~lg~~~--~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l 365 (392)
T PRK07108 292 PVFAVPKLLKQAGLKVDDIDLWELNE----AFAVQVLYCRDTLGIPM--DRLNVNGGAIAVGHPYGVSGARLTGHALIEG 365 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCchHhhh----HHHHHHHHHHHhcCCCc--cccCCCCChHHhCcchhhhHHHHHHHHHHHH
Confidence 46899999999999999999885430 01111223346677642 2345554 1344555555555555
Q ss_pred Hh
Q 039838 212 LK 213 (466)
Q Consensus 212 l~ 213 (466)
-+
T Consensus 366 ~~ 367 (392)
T PRK07108 366 KR 367 (392)
T ss_pred Hh
Confidence 33
No 205
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=70.72 E-value=28 Score=36.35 Aligned_cols=39 Identities=8% Similarity=-0.059 Sum_probs=28.8
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCCh
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGE 383 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~ 383 (466)
.+++++ ++| +. ++|||.+-+|-.-...--...+.||+-+
T Consensus 261 a~~a~~-~AG-i~---~~did~~elyD~Fs~~~~~~~E~lGl~~ 299 (388)
T PRK08142 261 GPAAFA-EAG-VT---PADIKYASIYDSFTITVLMQLEDLGFCK 299 (388)
T ss_pred HHHHHH-HcC-CC---HHHCCEEEEeccchHHHHHHHHHcCCCC
Confidence 355666 677 77 5899999999976555555568899854
No 206
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=70.49 E-value=1 Score=38.59 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC---CceEEE----ecCCcchHHHHHHHHHHH
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSMKS---DIKNFN----LSGMGCSASALAIDMAQA 210 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl~~---~~~~~d----l~~mgCs~~l~aL~lA~~ 210 (466)
-..++++++|+++|++|+|||.|... +......+.-+.-+.+-++-.. .+..-. ++....++++..|-.+--
T Consensus 26 ~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l 105 (119)
T PF02801_consen 26 ALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALL 105 (119)
T ss_dssp HHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHH
Confidence 34778999999999999999999863 3221112333444555554321 233222 333355666666666666
Q ss_pred HHhcC
Q 039838 211 LLKTQ 215 (466)
Q Consensus 211 ll~~~ 215 (466)
.++.+
T Consensus 106 ~l~~~ 110 (119)
T PF02801_consen 106 ALEHG 110 (119)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 66544
No 207
>PRK09604 UGMP family protein; Validated
Probab=69.65 E-value=14 Score=37.65 Aligned_cols=49 Identities=16% Similarity=0.230 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-----cHHHHHHHHcCC
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP-----SLSSIIINKYSM 184 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P-----s~a~~I~~~lGl 184 (466)
-.+.....++++|+++|++++|||.+.++..|...+. +.|.-++..++.
T Consensus 51 H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i 104 (332)
T PRK09604 51 HVENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK 104 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC
Confidence 3447788899999999999999999999987655333 334455555554
No 208
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=69.56 E-value=15 Score=37.51 Aligned_cols=88 Identities=15% Similarity=0.127 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-cHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP-SLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P-s~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
.+-....++++|+++|++.+|||+|-++..|+..-+ ......++.|.+.-+.+-+.++. |-|=+.+-.+.... .
T Consensus 51 ~e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~kPli~VnH--~~gHi~a~~l~~~~---~ 125 (342)
T COG0533 51 VENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNKPLIPVNH--LEGHIEAARLETGL---A 125 (342)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCCCEeecch--HHHHHHHHHhccCC---C
Confidence 345677899999999999999999999876665322 12233444443333456677774 66655444333221 1
Q ss_pred CCCeEEEEEecccc
Q 039838 216 KDSDALVLSTEILS 229 (466)
Q Consensus 216 ~~~~aLVVs~E~~s 229 (466)
..--+|+||+-...
T Consensus 126 ~p~v~LlVSGGHTq 139 (342)
T COG0533 126 FPPVALLVSGGHTQ 139 (342)
T ss_pred CCcEEEEEecCceE
Confidence 13457777765543
No 209
>PRK08256 lipid-transfer protein; Provisional
Probab=69.49 E-value=14 Score=38.54 Aligned_cols=43 Identities=12% Similarity=0.186 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKS 186 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~ 186 (466)
...|++++++++|++++|||.+-+.- ..+...-+..+.||+.+
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d----~f~~~~l~~le~lg~~~ 308 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHD----CFSANELLTYEALGLCP 308 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeecc----CCcHHHHHHHHHcCCCC
Confidence 35799999999999999999987641 23444455667777753
No 210
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=68.91 E-value=23 Score=37.45 Aligned_cols=25 Identities=8% Similarity=0.107 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe
Q 039838 140 LFPVIENLLSKVQISPQDIDILIIN 164 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~ 164 (466)
...|++++++++|++++|||++-+.
T Consensus 311 ~~~a~~~al~~AGl~~~DiD~~Ei~ 335 (428)
T PRK08963 311 PAYATPLALERAGLTLADLTLIDMH 335 (428)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 4578999999999999999998764
No 211
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=68.59 E-value=14 Score=37.15 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP 172 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P 172 (466)
.+.....++++|+++|++++|||.+.++..|...+.
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tg 84 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGS 84 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhh
Confidence 346778899999999999999999999987765433
No 212
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=67.13 E-value=9.6 Score=39.46 Aligned_cols=77 Identities=16% Similarity=0.091 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC-CCceE----EEecCCcchHHHHHHHHHHHHH
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSMK-SDIKN----FNLSGMGCSASALAIDMAQALL 212 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl~-~~~~~----~dl~~mgCs~~l~aL~lA~~ll 212 (466)
-..++++++|+++|++++|||.+... +....-.+.-+.-+.+-++-+ +.+.. -.++...+++|+..+-.+...|
T Consensus 276 ~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l 355 (406)
T cd00834 276 GAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLAL 355 (406)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHH
Confidence 45678999999999999999998874 332222333344455555542 11221 1233345666777776666677
Q ss_pred hcC
Q 039838 213 KTQ 215 (466)
Q Consensus 213 ~~~ 215 (466)
+.+
T Consensus 356 ~~~ 358 (406)
T cd00834 356 RDG 358 (406)
T ss_pred hcC
Confidence 765
No 213
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=66.46 E-value=15 Score=37.79 Aligned_cols=46 Identities=13% Similarity=0.113 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCCcHHHHHHHHcCC
Q 039838 139 VLFPVIENLLSKVQISPQDIDILII-NCSGFCPSPSLSSIIINKYSM 184 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~-~~s~~~~~Ps~a~~I~~~lGl 184 (466)
-...|++++|+++|++|+|||.+-. .+....-.+.-..-|.+-||-
T Consensus 207 ~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 207 GAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 4677999999999999999998765 343322244445667777764
No 214
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=66.26 E-value=11 Score=39.37 Aligned_cols=66 Identities=17% Similarity=0.285 Sum_probs=41.9
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHHHH
Q 039838 141 FPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQALL 212 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~ll 212 (466)
..+++++++++|++|+|||.+=++- .++...-+..+.||+.+ ..+|.+| .|++|....++++.+|-
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINE----AFSVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999987641 12333455567777642 2334333 14555555666666653
No 215
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=65.99 E-value=16 Score=37.34 Aligned_cols=52 Identities=17% Similarity=0.185 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-----cHHHHHHHHcCCC
Q 039838 134 KEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP-----SLSSIIINKYSMK 185 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P-----s~a~~I~~~lGl~ 185 (466)
++-.+-..++.+++|+++|.+|+|+|+|-++..|+.+.+ +.|-.++.++..+
T Consensus 80 ~~Hr~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 80 LLHRENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 444456778899999999999999999999887777654 4566677777654
No 216
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=65.72 E-value=24 Score=36.78 Aligned_cols=74 Identities=11% Similarity=0.084 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCceEE----EecCCcchHHHHHHHHHHHHHhc
Q 039838 140 LFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSMKSDIKNF----NLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl~~~~~~~----dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
..+|++++|+++|++|+|||.+... +....-.+.-+..|.+.+|-+ .+.. .++...+++++..+..+...|+.
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~--~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~ 339 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDG--VPCSSTKGLTGHTLGAAGAVEAAICWLALRH 339 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCC--CceeCCCcccccChhhcchHHHHHHHHHHhc
Confidence 3579999999999999999998763 322211233345566666632 2211 13333444444444444444454
Q ss_pred C
Q 039838 215 Q 215 (466)
Q Consensus 215 ~ 215 (466)
+
T Consensus 340 ~ 340 (392)
T PRK09185 340 G 340 (392)
T ss_pred C
Confidence 3
No 217
>PRK06158 thiolase; Provisional
Probab=64.90 E-value=22 Score=36.99 Aligned_cols=41 Identities=10% Similarity=0.152 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSMK 185 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl~ 185 (466)
...|++++++++|++|+|||.+=+. | ++...-+..+.||+-
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD~-----Fs~~~l~~~E~lG~~ 297 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYDA-----FTINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecCC-----chHHHHHHHHHcCCC
Confidence 4579999999999999999998653 3 333444555667664
No 218
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=64.66 E-value=10 Score=37.46 Aligned_cols=55 Identities=25% Similarity=0.235 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-----cHHHHHHHHcCCCCCceEEEecC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP-----SLSSIIINKYSMKSDIKNFNLSG 195 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P-----s~a~~I~~~lGl~~~~~~~dl~~ 195 (466)
.+.....++++|+++|++++|||.+.++..|+..+. +.|.-++..+ +++.+.++.
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~----~~Pli~v~~ 89 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALAL----NIPLIGVSH 89 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHT----T--EEEEEH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHh----CCCeEeecc
Confidence 345678999999999999999999999987766543 2333344444 455666664
No 219
>PRK08304 stage V sporulation protein AD; Validated
Probab=64.00 E-value=21 Score=36.48 Aligned_cols=87 Identities=17% Similarity=0.191 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCC-----CC--ceEEEecC---------CcchHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMK-----SD--IKNFNLSG---------MGCSASAL 203 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~-----~~--~~~~dl~~---------mgCs~~l~ 203 (466)
|+..+.+=|+++|.+|+|-|+||..- ....--.+...+..+-|+. .| +.-||... -|||+.+.
T Consensus 210 a~dti~~h~~d~~~~~~~yDli~tGD-lg~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~ 288 (337)
T PRK08304 210 AADTIQQHFKDTGRSPEDYDLIVTGD-LGRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVT 288 (337)
T ss_pred HHHHHHHHHHHcCCChhhccEEEEcc-hHHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHH
Confidence 34444556789999999999888642 1111223334444444442 11 24455222 26777666
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccc
Q 039838 204 AIDMAQALLKTQKDSDALVLSTEIL 228 (466)
Q Consensus 204 aL~lA~~ll~~~~~~~aLVVs~E~~ 228 (466)
.=.+-+.| +.+..+++|+|++-..
T Consensus 289 ~~~~~~~~-~~g~~~rvl~v~tGaL 312 (337)
T PRK08304 289 YGYLLKEL-QKGKLKRVLVVATGAL 312 (337)
T ss_pred HHHHHHHH-hcCCceEEEEEEchhh
Confidence 65555554 5577999999998774
No 220
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=62.75 E-value=14 Score=38.33 Aligned_cols=67 Identities=21% Similarity=0.326 Sum_probs=43.4
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CcchHHHHHHHHHHHHH
Q 039838 141 FPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG--------MGCSASALAIDMAQALL 212 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~--------mgCs~~l~aL~lA~~ll 212 (466)
..|++++++++|++|+|||.+=.+ ........+..+.||+.+ ..+|.+| .|++|....++++++|-
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~----d~Fa~~~~~~~e~lG~~~--~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~ 356 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEIN----EAFAPVVLAWLKETGADP--AKVNPNGGAIALGHPLGATGAKLMTTLLHELE 356 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeec----ccchHHHHHHHHHhCCCc--hhcCCCcchhhhcCcHHHHHHHHHHHHHHHHH
Confidence 569999999999999999998654 113344455677888753 3566665 13344445555555554
Q ss_pred h
Q 039838 213 K 213 (466)
Q Consensus 213 ~ 213 (466)
.
T Consensus 357 ~ 357 (382)
T PRK07801 357 R 357 (382)
T ss_pred h
Confidence 3
No 221
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=62.72 E-value=13 Score=38.82 Aligned_cols=45 Identities=18% Similarity=0.187 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSM 184 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl 184 (466)
...|++++|+++|++|+|||.+-.. +....-.+.-..-+.+.+|.
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~ 323 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcc
Confidence 4578999999999999999998753 32222233334456666663
No 222
>PRK07855 lipid-transfer protein; Provisional
Probab=62.16 E-value=28 Score=36.25 Aligned_cols=41 Identities=17% Similarity=0.250 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSMK 185 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl~ 185 (466)
+..|++++++++|++++|||++=+. | ++...-+..+.||+-
T Consensus 268 ~~~aa~~a~~~AGi~~~DiDv~El~D~-----Ft~~~l~~~E~lG~~ 309 (386)
T PRK07855 268 MGLVARQLWAQSGLGPADIDTAILYDH-----FTPFVLMQLEELGFC 309 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEeccC-----CcHHHHHHHHHcCCC
Confidence 3479999999999999999998664 3 223334444555543
No 223
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=61.80 E-value=14 Score=38.38 Aligned_cols=45 Identities=20% Similarity=0.172 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYS 183 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lG 183 (466)
-..+|++++|+++|++|+|||.+... ++...-.+.-+..+.+-+|
T Consensus 275 ~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~ 320 (407)
T cd00828 275 GIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320 (407)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHh
Confidence 46789999999999999999998763 3322223333444455554
No 224
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=61.25 E-value=23 Score=36.99 Aligned_cols=46 Identities=13% Similarity=0.223 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSM 184 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl 184 (466)
....|++++|+++|++++|||.+... +....-...-...+.+-+|.
T Consensus 280 ~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 280 AQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 45679999999999999999999874 32221122223445555653
No 225
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=61.02 E-value=24 Score=35.66 Aligned_cols=55 Identities=15% Similarity=0.182 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-----cHHHHHHHHcCCCCCceEEEecC
Q 039838 137 QMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP-----SLSSIIINKYSMKSDIKNFNLSG 195 (466)
Q Consensus 137 ~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P-----s~a~~I~~~lGl~~~~~~~dl~~ 195 (466)
.+.....++++|+++|++.+|||.+.++..|...+. +.|.-++..++ ++.+.++.
T Consensus 50 ~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~h 109 (314)
T TIGR03723 50 LEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEeccc
Confidence 346788899999999999999999999887765433 23444444444 44555554
No 226
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=60.83 E-value=27 Score=36.65 Aligned_cols=71 Identities=15% Similarity=0.091 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCC-CceEEEecCCcchHHHHHHHHHHHHHh
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSMKS-DIKNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl~~-~~~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
-+.+|++++|+++|+ ++|||.|... ++...--..-+..|.+.++.+- .+++ +.| -|-+..-++.++...+.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks--~~G-H~l~AAGa~e~i~~~la 353 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGPVRGIGT--LFG-HTMEAQFPLGLALAALS 353 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCCccccch--hhc-cchHHHHHHHHHHHHHH
Confidence 357899999999999 8999998753 3322223333455667776431 1222 233 34444444555555444
No 227
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=60.45 E-value=11 Score=35.43 Aligned_cols=35 Identities=29% Similarity=0.442 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP 172 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P 172 (466)
+.....++++|+++|++++|||.+.++..|+..+.
T Consensus 35 ~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTG 69 (202)
T TIGR03725 35 EILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTG 69 (202)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHh
Confidence 46677999999999999999999999887766554
No 228
>PRK07937 lipid-transfer protein; Provisional
Probab=60.38 E-value=34 Score=35.24 Aligned_cols=77 Identities=13% Similarity=0.098 Sum_probs=46.3
Q ss_pred HHHHHHHHH-cCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCC-------cchHHHHHHHHHHHHHh
Q 039838 142 PVIENLLSK-VQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGM-------GCSASALAIDMAQALLK 213 (466)
Q Consensus 142 ~Aa~~aL~~-agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~m-------gCs~~l~aL~lA~~ll~ 213 (466)
.++++++++ +|++|+|||++=+. ..++....+..+.||+..+ ..+|.+|- ||+|....++.+.++..
T Consensus 250 ~~~~~a~~~aAgi~~~diD~~Ei~----D~F~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g 324 (352)
T PRK07937 250 PSTALAAEAATGGDAGGVDVAELH----APFTHQELILREALGLGDK-TKVNPSGGALAANPMFAAGLERIGEAARHIWD 324 (352)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEe----CCChHHHHHHHHHcCCCCC-CCcCCCccchhcCchhHHHHHHHHHHHHHHhc
Confidence 444555555 59999999998764 1244555667889998532 35565551 44455555555555543
Q ss_pred cCCCCeEEEEE
Q 039838 214 TQKDSDALVLS 224 (466)
Q Consensus 214 ~~~~~~aLVVs 224 (466)
. ..+++|+.+
T Consensus 325 ~-~a~~~l~~~ 334 (352)
T PRK07937 325 G-SARRALAHA 334 (352)
T ss_pred c-CCCEEEEec
Confidence 3 345666543
No 229
>PRK14878 UGMP family protein; Provisional
Probab=60.15 E-value=17 Score=36.86 Aligned_cols=51 Identities=20% Similarity=0.219 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-----cHHHHHHHHcCC
Q 039838 133 IKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP-----SLSSIIINKYSM 184 (466)
Q Consensus 133 ~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P-----s~a~~I~~~lGl 184 (466)
+...+.+ ..+++++|+++|++++|||.+.++..|...+. +.|.-++..++.
T Consensus 42 ~~h~~~l-~~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~ 97 (323)
T PRK14878 42 QHHAEVA-PELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK 97 (323)
T ss_pred HHHHHHH-HHHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC
Confidence 3444444 48999999999999999999999887665432 224445555554
No 230
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=59.78 E-value=27 Score=36.78 Aligned_cols=46 Identities=17% Similarity=0.073 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHH-cCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 039838 139 VLFPVIENLLSK-VQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSM 184 (466)
Q Consensus 139 la~~Aa~~aL~~-agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl 184 (466)
-..+|++++|++ +|++|+|||.+-.. +....-.+.-..-+.+-+|-
T Consensus 284 ~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 284 GARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 457799999999 99999999998864 43222223333446666664
No 231
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=59.43 E-value=19 Score=37.34 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSM 184 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl 184 (466)
..+|++++|+++|++|+|||.+... +....-.+.-...+.+.+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 4678999999999999999998753 33222234444556666664
No 232
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=58.66 E-value=30 Score=29.81 Aligned_cols=52 Identities=15% Similarity=0.206 Sum_probs=37.7
Q ss_pred HHHHHHHHHcCCCcCCcCEEEEeecCC--CCCCcHHHHHHHHcCCCCCceEEEecCC
Q 039838 142 PVIENLLSKVQISPQDIDILIINCSGF--CPSPSLSSIIINKYSMKSDIKNFNLSGM 196 (466)
Q Consensus 142 ~Aa~~aL~~agi~~~dID~LI~~~s~~--~~~Ps~a~~I~~~lGl~~~~~~~dl~~m 196 (466)
+-.++.+++.+++++||--++++.|+| ..+|+. .++++|.-.+++-++...|
T Consensus 24 eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FPA~---aaR~~~~~~~Vplmc~qE~ 77 (117)
T cd02185 24 ELLEEIIERNNIKPEDIISVIFTVTPDLDAAFPAK---AARELGGWKYVPLMCAQEM 77 (117)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEeCCcccccChHH---HHHhcCCCCCcceeecCcC
Confidence 345577789999999999999988765 346654 4556654447888777776
No 233
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=58.31 E-value=28 Score=36.16 Aligned_cols=42 Identities=7% Similarity=0.118 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMK 185 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~ 185 (466)
...|++++++++|++|+|||.+-+.- ..+....+..+.||+.
T Consensus 259 ~~~a~~~al~~Agi~~~DiD~~ei~d----~ft~~~l~~le~lGl~ 300 (385)
T PRK12578 259 TQLAARQAYNMAKVTPNDIEVATVHD----AFTIAEIMGYEDLGFT 300 (385)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCC
Confidence 45799999999999999999976531 1234555667788875
No 234
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=57.92 E-value=25 Score=38.53 Aligned_cols=45 Identities=13% Similarity=0.175 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCCcHHHHHHHHcCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILII-NCSGFCPSPSLSSIIINKYSM 184 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~-~~s~~~~~Ps~a~~I~~~lGl 184 (466)
..+|++++|+++|++|+|||.|-. .++...-.+.-...|.+-+|-
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 468899999999999999998875 343222223334556667764
No 235
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=57.45 E-value=50 Score=35.00 Aligned_cols=41 Identities=10% Similarity=0.058 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHcCCC--cCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC
Q 039838 140 LFPVIENLLSKVQIS--PQDIDILIIN-CSGFCPSPSLSSIIINKYSMK 185 (466)
Q Consensus 140 a~~Aa~~aL~~agi~--~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl~ 185 (466)
...|++++++++|++ ++|||++=+. | .+...-+..+.||+.
T Consensus 295 ~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~-----Fa~~~l~~lE~lGl~ 338 (430)
T PRK06365 295 GRMAAKEAYEMAGITDPLNDLDLIELHDA-----YTSSEIQTYEDLGLC 338 (430)
T ss_pred HHHHHHHHHHHcCCCCCHHHCCEEEeecC-----CcHHHHHHHHHcCCC
Confidence 357999999999997 7999998764 3 233344555667764
No 236
>PLN03170 chalcone synthase; Provisional
Probab=56.71 E-value=24 Score=37.03 Aligned_cols=71 Identities=8% Similarity=0.100 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCce------EEEecCCcchHHHHHHHHH
Q 039838 135 EAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIK------NFNLSGMGCSASALAIDMA 208 (466)
Q Consensus 135 ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~------~~dl~~mgCs~~l~aL~lA 208 (466)
.+.......++++|+++|++++|||..++... -+..-..+.++||++++-. --+.++|+.++.+.+|+-.
T Consensus 278 ~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 278 LISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 35556667888999999999999998765421 3445567889999975432 1245566666666666665
Q ss_pred H
Q 039838 209 Q 209 (466)
Q Consensus 209 ~ 209 (466)
.
T Consensus 354 ~ 354 (401)
T PLN03170 354 R 354 (401)
T ss_pred H
Confidence 3
No 237
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=56.62 E-value=54 Score=34.10 Aligned_cols=42 Identities=12% Similarity=0.099 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHcCCC--cCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCC
Q 039838 139 VLFPVIENLLSKVQIS--PQDIDILIIN-CSGFCPSPSLSSIIINKYSMK 185 (466)
Q Consensus 139 la~~Aa~~aL~~agi~--~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl~ 185 (466)
....|++++++++|++ ++|||++=+. | ++...-+..+.||+.
T Consensus 256 ~~~~a~~~a~~~Agi~~p~~Did~~el~d~-----F~~~~~~~~e~lGl~ 300 (386)
T PRK08313 256 AGRDAAAALWKAAGITDPRDEIDVAEIYVP-----FSWFEPMWLENLGFA 300 (386)
T ss_pred HHHHHHHHHHHHcCCCCChhhCCEEEeccC-----ChHHHHHHHHHcCCC
Confidence 4457999999999997 6999987653 3 334445556677765
No 238
>PLN03173 chalcone synthase; Provisional
Probab=56.37 E-value=25 Score=36.79 Aligned_cols=71 Identities=11% Similarity=0.127 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-----E-EecCCcchHHHHHHHHH
Q 039838 135 EAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKN-----F-NLSGMGCSASALAIDMA 208 (466)
Q Consensus 135 ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~-----~-dl~~mgCs~~l~aL~lA 208 (466)
.+..-....++++|++.|++++|||..++.. .-+..-..++++||++++-.. + +.++|+.++.+.+|+-+
T Consensus 274 ~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hq----gg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (391)
T PLN03173 274 LISKNVEKSLTEAFKPLGISDWNSLFWIAHP----GGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEM 349 (391)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEECC----CcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence 4555667788899999999999999976642 234555678999999754322 2 33444444444555544
Q ss_pred H
Q 039838 209 Q 209 (466)
Q Consensus 209 ~ 209 (466)
.
T Consensus 350 ~ 350 (391)
T PLN03173 350 R 350 (391)
T ss_pred H
Confidence 3
No 239
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=56.16 E-value=33 Score=29.61 Aligned_cols=51 Identities=12% Similarity=0.264 Sum_probs=38.2
Q ss_pred HHHHHHHHHcCCCcCCcCEEEEeecCC--CCCCcHHHHHHHHc-CCCCCceEEEecCC
Q 039838 142 PVIENLLSKVQISPQDIDILIINCSGF--CPSPSLSSIIINKY-SMKSDIKNFNLSGM 196 (466)
Q Consensus 142 ~Aa~~aL~~agi~~~dID~LI~~~s~~--~~~Ps~a~~I~~~l-Gl~~~~~~~dl~~m 196 (466)
+-.++.+++.+++++||--++++.|+| ..+|+. .++++ |.. +++-++...|
T Consensus 24 eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA~---aaR~~~Gw~-~Vplmc~qEm 77 (117)
T TIGR01796 24 ELLTELMERNELTPEDLISVIFTVTEDLHADFPAA---AARGLPGWT-DVPVMCAQEI 77 (117)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEecCcccccChHH---HHHhccCCC-CcceeccCcC
Confidence 345577789999999999999988765 446754 44466 886 7888887776
No 240
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=56.12 E-value=27 Score=36.87 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYS 183 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lG 183 (466)
..+|++++|+++|++|+|||.+... +......+.-..-|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 5688999999999999999999874 3222223333344555555
No 241
>PRK12404 stage V sporulation protein AD; Provisional
Probab=55.69 E-value=49 Score=33.77 Aligned_cols=87 Identities=22% Similarity=0.246 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC------C--ceEEEec--------CCcchHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKS------D--IKNFNLS--------GMGCSASAL 203 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~------~--~~~~dl~--------~mgCs~~l~ 203 (466)
|+..+.+=|+++|.+|+|-|+||..- ....--.+...+..+-|+.- | ..-||-. |-|||+.+.
T Consensus 208 A~dti~~h~~d~~~~~~~yDlI~TGD-Lg~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~ 286 (334)
T PRK12404 208 AVDTIEAHLRDRQIDASYYDLIVTGD-LGHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVT 286 (334)
T ss_pred HHHHHHHHHHHhCCChhhccEEEEcc-hHHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHH
Confidence 34445566789999999999888641 11112233444444444421 1 1233321 225666665
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccc
Q 039838 204 AIDMAQALLKTQKDSDALVLSTEIL 228 (466)
Q Consensus 204 aL~lA~~ll~~~~~~~aLVVs~E~~ 228 (466)
.=.+-+. |+.+..+++|+|++-..
T Consensus 287 ~g~~~~~-~~~g~~~rvL~v~TGAL 310 (334)
T PRK12404 287 YGHLLNR-MKRGELKRILVVATGAL 310 (334)
T ss_pred HHHHHHH-HhcCCceEEEEEEchhh
Confidence 5555444 45577999999998774
No 242
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=55.57 E-value=22 Score=37.47 Aligned_cols=75 Identities=19% Similarity=0.220 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCCcHHHHHHHHcCCCCC---c-eEEEecCCcchHHHHHHHHHHHHHh
Q 039838 139 VLFPVIENLLSKVQISPQDIDILII-NCSGFCPSPSLSSIIINKYSMKSD---I-KNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~-~~s~~~~~Ps~a~~I~~~lGl~~~---~-~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
=+.+|.+.||+++|++|+|||.|-. .++...-...-+.-|.+-+|-... + -.-.+.| .|-+..-+++.+..++.
T Consensus 277 Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tG-H~lGAaGaveai~~~l~ 355 (412)
T COG0304 277 GAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTG-HTLGAAGAVEAIISLLA 355 (412)
T ss_pred hHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccc-cChhhHHHHHHHHHHHH
Confidence 4568999999999999999999985 454433344444556666663211 1 1223344 45555555555555554
Q ss_pred c
Q 039838 214 T 214 (466)
Q Consensus 214 ~ 214 (466)
-
T Consensus 356 l 356 (412)
T COG0304 356 L 356 (412)
T ss_pred H
Confidence 4
No 243
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=54.53 E-value=21 Score=37.16 Aligned_cols=45 Identities=16% Similarity=0.280 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCCcHHHHHHHHcC
Q 039838 139 VLFPVIENLLSKVQISPQDIDILII-NCSGFCPSPSLSSIIINKYS 183 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~-~~s~~~~~Ps~a~~I~~~lG 183 (466)
...+|++++|+++|++|+|||.+-. .++...-.+.-..-|.+-+|
T Consensus 255 ~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 255 SAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 4678999999999999999999876 34322222333344555565
No 244
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=54.30 E-value=37 Score=34.63 Aligned_cols=87 Identities=17% Similarity=0.192 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCC--C---C--ceEEEec--------CCcchHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMK--S---D--IKNFNLS--------GMGCSASALA 204 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~--~---~--~~~~dl~--------~mgCs~~l~a 204 (466)
|+..+.+=|+++|.+|+|-|+||..- ....--.+...+..+-|+. + | ..-||-. |-|||+.+..
T Consensus 204 a~dti~~h~~d~~~~~~~yd~i~tgd-lg~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~ 282 (327)
T TIGR02845 204 AADTIEAHFKDTGRSVDDYDLIVTGD-LARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTY 282 (327)
T ss_pred HHHHHHHHHHHcCCChhhccEEEecc-hHHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHHH
Confidence 34445566789999999999888642 1111223333444444431 0 1 1233221 2256666665
Q ss_pred HHHHHHHHhcCCCCeEEEEEeccc
Q 039838 205 IDMAQALLKTQKDSDALVLSTEIL 228 (466)
Q Consensus 205 L~lA~~ll~~~~~~~aLVVs~E~~ 228 (466)
=.+-+.| +.+..+++|+|++-..
T Consensus 283 ~~~~~~~-~~g~~~r~l~v~tgal 305 (327)
T TIGR02845 283 GHILKEM-LRGKLKKVLVVATGAL 305 (327)
T ss_pred HHHHHHH-hcCcceEEEEEEchhh
Confidence 5555544 4577899999998774
No 245
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=53.86 E-value=25 Score=36.80 Aligned_cols=76 Identities=12% Similarity=0.165 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCCcHHHHHHHHcCCCCCceEEE----ecCCcchHHHHHHHHHHHHHh
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIIN-CSGFCPSPSLSSIIINKYSMKSDIKNFN----LSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~-~s~~~~~Ps~a~~I~~~lGl~~~~~~~d----l~~mgCs~~l~aL~lA~~ll~ 213 (466)
-..+|++++|+++|++|+|||.|... +....-.+.-+.-|.+-||-. .++... ++...+++++..+..+-..|+
T Consensus 271 ~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~ 349 (399)
T cd00832 271 GLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALR 349 (399)
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHh
Confidence 45688999999999999999987753 333233444445567777643 222222 222234444444444444455
Q ss_pred cC
Q 039838 214 TQ 215 (466)
Q Consensus 214 ~~ 215 (466)
.+
T Consensus 350 ~~ 351 (399)
T cd00832 350 DG 351 (399)
T ss_pred CC
Confidence 43
No 246
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=53.27 E-value=26 Score=33.87 Aligned_cols=78 Identities=9% Similarity=0.096 Sum_probs=44.0
Q ss_pred HhhhhccCCCCCCCccccccEEEecC----CCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCC
Q 039838 341 KGFIKNSCDVYVPNFKAAVQHFCLPV----SGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKER 416 (466)
Q Consensus 341 ~~~l~~~~~~~~pd~~~did~~~~H~----~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~ 416 (466)
++.|+ ++| .. .+||+|++.-. ..+.+--.+.+.|||+++-- |.-+.-.|--++.+.+-.-.+..+.
T Consensus 109 ~~AL~-~~g-~~---~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~~A~~~~~~-- 178 (226)
T PF00195_consen 109 RKALA-EAG-LD---PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLRRAKDIARA-- 178 (226)
T ss_dssp HHHHH-HHT-S----GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHHHHHHHHHH--
T ss_pred HHHHH-HcC-CC---CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHHHHHHHHhC--
Confidence 45566 566 66 68999999732 34566668999999987532 3334444544444444222333332
Q ss_pred CCCCCEEEEEeec
Q 039838 417 VKKGDRVWLIGAG 429 (466)
Q Consensus 417 i~~Gd~vllia~G 429 (466)
.||.+|++++.=
T Consensus 179 -~p~a~VLvv~vE 190 (226)
T PF00195_consen 179 -NPGARVLVVCVE 190 (226)
T ss_dssp -STT-EEEEEEEE
T ss_pred -CccceEEEEEEE
Confidence 589999998764
No 247
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=52.82 E-value=16 Score=36.73 Aligned_cols=85 Identities=19% Similarity=0.199 Sum_probs=44.0
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCC-----------------CCceEEEecCCcchHHHH
Q 039838 141 FPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMK-----------------SDIKNFNLSGMGCSASAL 203 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~-----------------~~~~~~dl~~mgCs~~l~ 203 (466)
+..+.+=|+++|.+|+|-|+||..- ....--.+...+.++-|+. +++++=.-+. |||+.+.
T Consensus 206 ~dTI~~h~~D~g~~p~dYDlIvTGD-Lg~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGc-gCSA~V~ 283 (329)
T PF07451_consen 206 ADTIEQHFKDTGRSPDDYDLIVTGD-LGKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGC-GCSAVVL 283 (329)
T ss_dssp HHHHHHHHHHCT--GGG-SEEEESS--HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESH-HHHHHHH
T ss_pred HHHHHHHHHHhCCChhhcCeEEecc-hHHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCc-chHHHHH
Confidence 3334455789999999999988741 1111123344445555543 1222222233 6676666
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccc
Q 039838 204 AIDMAQALLKTQKDSDALVLSTEIL 228 (466)
Q Consensus 204 aL~lA~~ll~~~~~~~aLVVs~E~~ 228 (466)
.=.+-+. |+.+..+|+|+|++-..
T Consensus 284 ~g~ll~~-l~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 284 CGYLLPK-LRKGELKRVLFVATGAL 307 (329)
T ss_dssp HHCHHHH-HHTTS-SEEEEEEEEE-
T ss_pred HHHHHHH-HHcCCceEEEEEEchhh
Confidence 6555555 45578999999998764
No 248
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=52.28 E-value=43 Score=28.96 Aligned_cols=52 Identities=19% Similarity=0.319 Sum_probs=33.2
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCC--CCCCcHHHHHHHHc-CCCCCceEEEecCC
Q 039838 141 FPVIENLLSKVQISPQDIDILIINCSGF--CPSPSLSSIIINKY-SMKSDIKNFNLSGM 196 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~s~~--~~~Ps~a~~I~~~l-Gl~~~~~~~dl~~m 196 (466)
.+-.++.+++.+++++||--+++++|+| ...|+.+.+ ++ |.. +++-+....|
T Consensus 23 ~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a~R---~~~g~~-~Vpl~c~~E~ 77 (118)
T PF07736_consen 23 RELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAAAR---ELPGWD-DVPLMCAQEM 77 (118)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHHHH---HTTTGT-TSEEEEEE--
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHHHH---ccCCCC-ccceeccCcC
Confidence 3345677889999999999999998765 457766544 44 775 7777766654
No 249
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=52.28 E-value=42 Score=36.43 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-----cHHHHHHHHcCCCCCceEEEecCC
Q 039838 133 IKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP-----SLSSIIINKYSMKSDIKNFNLSGM 196 (466)
Q Consensus 133 ~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P-----s~a~~I~~~lGl~~~~~~~dl~~m 196 (466)
+...+.+. .+++++|+++|++++|||.|.++..|...+. +.|.-++..+|. +.+.++.+
T Consensus 46 ~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~----~~~~v~h~ 109 (535)
T PRK09605 46 EHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDV----PLIGVNHC 109 (535)
T ss_pred HHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCC----CeecccHH
Confidence 44455444 9999999999999999999999876654322 223344555554 44445543
No 250
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.17 E-value=35 Score=35.81 Aligned_cols=46 Identities=13% Similarity=0.101 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCCcHHHHHHHHcCC
Q 039838 139 VLFPVIENLLSKVQISPQDIDILII-NCSGFCPSPSLSSIIINKYSM 184 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~-~~s~~~~~Ps~a~~I~~~lGl 184 (466)
-..++++++|+++|++|+|||.+.. .++...--+.-+.-|.+-+|-
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~ 322 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA 322 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhCC
Confidence 3468899999999999999999875 343333334555667777773
No 251
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=51.86 E-value=16 Score=31.11 Aligned_cols=67 Identities=10% Similarity=0.057 Sum_probs=36.9
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHH-----HHcCCChh--hHHHHHHhHhhcCccccchHHHHHHHHH
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIA-----KNLKLGER--DIEAALMTLHRFGNQSSSSLWYELAYME 412 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~-----~~Lgl~~e--~~~~s~~~l~~~GNtssaSi~~~L~~~~ 412 (466)
+++.|+ +++ +. .+|||++..|..|....|..+ +.++-... .+ +....=..+||+.+++-.++|....
T Consensus 31 i~~al~-~ag-i~---~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~-~v~s~K~~~Gh~~~asG~~~l~~~~ 104 (119)
T PF02801_consen 31 IRRALA-DAG-IS---PEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPV-PVGSVKSNIGHTEAASGLLSLAKAL 104 (119)
T ss_dssp HHHHHH-HHT-S----GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTS-EEE-THHHH-B-GGGHHHHHHHHHH
T ss_pred HHHHHh-hhc-cc---cccceeeeeeccccccchhhhhhhhhhhhccccccccc-ceeccccccccccccchHHHHHHHH
Confidence 345566 566 77 589999999999988766643 33333220 11 0022336789999999999887643
No 252
>PLN03171 chalcone synthase-like protein; Provisional
Probab=51.66 E-value=44 Score=35.05 Aligned_cols=71 Identities=11% Similarity=0.020 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHH---------cCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceE------EEecCCcc
Q 039838 134 KEAQMVLFPVIENLLSK---------VQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKN------FNLSGMGC 198 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~---------agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~------~dl~~mgC 198 (466)
++.+.+..+++++++++ .|++++|||.+++- . -+.+-..+.++||++++-.. -+.++|++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~Hq---~--~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVHP---G--SSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEEcC---C--cHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 44555666666777665 57889999887531 1 22555678999999754321 25566666
Q ss_pred hHHHHHHHHHH
Q 039838 199 SASALAIDMAQ 209 (466)
Q Consensus 199 s~~l~aL~lA~ 209 (466)
++...+|+-+.
T Consensus 350 aSip~~L~~~~ 360 (399)
T PLN03171 350 ATVIFALDELR 360 (399)
T ss_pred hhHHHHHHHHH
Confidence 66667776554
No 253
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=51.39 E-value=25 Score=35.64 Aligned_cols=36 Identities=19% Similarity=0.182 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCC
Q 039838 133 IKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFC 169 (466)
Q Consensus 133 ~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~ 169 (466)
|+.++. ...+++++|+++|++++|||.|.++.-|..
T Consensus 43 ~~H~~~-l~~~i~~~l~~~~~~~~did~Iavt~gPg~ 78 (322)
T TIGR03722 43 EHHAEV-APKLIKEALEEAGVSLEDIDAVAFSQGPGL 78 (322)
T ss_pred HHHHHH-HHHHHHHHHHHcCCCHHHCCEEEEecCCch
Confidence 344443 445599999999999999999999876543
No 254
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=50.85 E-value=37 Score=35.62 Aligned_cols=45 Identities=13% Similarity=0.052 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCCcHHHHHHHHcC
Q 039838 139 VLFPVIENLLSKVQISPQDIDILII-NCSGFCPSPSLSSIIINKYS 183 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~-~~s~~~~~Ps~a~~I~~~lG 183 (466)
-..+|++++|+++|++|+|||.|-. .+....-.+.-...+.+.+|
T Consensus 289 ~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 289 GARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 4578899999999999999999875 33222222334456677776
No 255
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=50.38 E-value=75 Score=33.65 Aligned_cols=25 Identities=12% Similarity=0.211 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE
Q 039838 139 VLFPVIENLLSKVQISPQDIDILII 163 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~ 163 (466)
-...|++++|+++|++|+|||.+-.
T Consensus 300 ~~~~a~~~Al~~Agi~~~dId~ve~ 324 (437)
T PLN02836 300 GAVLAMTRALQQSGLHPNQVDYVNA 324 (437)
T ss_pred HHHHHHHHHHHHcCCCHhHcCEEEc
Confidence 3567899999999999999999876
No 256
>PLN00415 3-ketoacyl-CoA synthase
Probab=49.20 E-value=52 Score=35.29 Aligned_cols=77 Identities=12% Similarity=0.036 Sum_probs=46.9
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCC----HHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcC
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSG----RPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKE 415 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~----~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g 415 (466)
.+++|+ ++| +. .+|||+++....+ +..--.+++++|++++-. . -..+.+|++.-.+.|..+.+-=
T Consensus 142 ~~~aL~-~aG-i~---p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~-----~-~dL~gmGCsggv~aL~lA~~ll 210 (466)
T PLN00415 142 LNSLFK-KTG-IE---PREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVK-----T-YNLSGMGCSAGAISVDLATNLL 210 (466)
T ss_pred HHHHHH-HcC-CC---HHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCce-----E-EEeccccchHHHHHHHHHHHHH
Confidence 456777 677 87 5899998875443 344456889999984321 1 2345556666666665433211
Q ss_pred CCCCCCEEEEEe
Q 039838 416 RVKKGDRVWLIG 427 (466)
Q Consensus 416 ~i~~Gd~vllia 427 (466)
+..++.++++++
T Consensus 211 ~a~~~~~aLVVs 222 (466)
T PLN00415 211 KANPNTYAVIVS 222 (466)
T ss_pred HhCCCCEEEEEE
Confidence 234677777665
No 257
>PLN03172 chalcone synthase family protein; Provisional
Probab=48.53 E-value=59 Score=34.02 Aligned_cols=77 Identities=16% Similarity=0.040 Sum_probs=47.9
Q ss_pred HHhhhhccCCCCCCCccccccEEEecC----CCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcC
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPV----SGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKE 415 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~----~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g 415 (466)
.+++|+ ++| +. .+|||+++... ..+..--.+++.||++..-. . ---.|+++++-.+.|..+..-=
T Consensus 110 a~~aL~-~ag-~~---~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~----~--~~~~~~gC~g~~~aL~~A~~~~ 178 (393)
T PLN03172 110 AAKAIK-EWG-QP---KSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVK----R--FMMYQQGCFAGGTVLRLAKDLA 178 (393)
T ss_pred HHHHHH-HcC-CC---HHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCce----E--EeeeCCchHHHHHHHHHHHHHH
Confidence 456777 677 77 58999987533 23455566899999986410 0 0135677888888776543311
Q ss_pred CCCCCCEEEEEe
Q 039838 416 RVKKGDRVWLIG 427 (466)
Q Consensus 416 ~i~~Gd~vllia 427 (466)
+-.++.+|++++
T Consensus 179 ~~~~~~~vLVV~ 190 (393)
T PLN03172 179 ENNAGSRVLVVC 190 (393)
T ss_pred HcCCCCeEEEEE
Confidence 123567777665
No 258
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=47.20 E-value=40 Score=35.48 Aligned_cols=45 Identities=9% Similarity=-0.065 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCCcHHHHHHHHcC
Q 039838 139 VLFPVIENLLSKVQISPQDIDILII-NCSGFCPSPSLSSIIINKYS 183 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~-~~s~~~~~Ps~a~~I~~~lG 183 (466)
-...|++++|+++|++|+|||.+-. .+....-.+.-+.-|.+-+|
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 3567889999999999999998865 34332224444556666666
No 259
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=46.11 E-value=48 Score=34.38 Aligned_cols=26 Identities=19% Similarity=0.364 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIIN 164 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~ 164 (466)
-..+|++++|+++|++++|||.+...
T Consensus 280 ~~~~a~~~al~~Agi~~~did~i~~h 305 (421)
T cd00833 280 AQAALIRRAYARAGVDPSDIDYVEAH 305 (421)
T ss_pred HHHHHHHHHHHHhCCCHHHCcEEEee
Confidence 45689999999999999999999874
No 260
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=45.91 E-value=43 Score=35.29 Aligned_cols=46 Identities=13% Similarity=0.037 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCCcHHHHHHHHcCC
Q 039838 139 VLFPVIENLLSKVQISPQDIDILII-NCSGFCPSPSLSSIIINKYSM 184 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~-~~s~~~~~Ps~a~~I~~~lGl 184 (466)
-..+|++++|+++|++|+|||.+-. .++...-.+.-+..|.+-+|-
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 3568899999999999999999875 343322244455667777774
No 261
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=45.58 E-value=80 Score=32.53 Aligned_cols=58 Identities=14% Similarity=0.260 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-cHHHHHHHHcCCCCCceEEEecC
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP-SLSSIIINKYSMKSDIKNFNLSG 195 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P-s~a~~I~~~lGl~~~~~~~dl~~ 195 (466)
+.....++++|+++|++++|||.|.++..|...+. -.....++.|...-+++.+.++.
T Consensus 51 ~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~a~~~PligV~H 109 (345)
T PTZ00340 51 EHILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSLLWGKPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHHHcCCCEeecch
Confidence 35677889999999999999999999876664221 11222333333222455666664
No 262
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=45.56 E-value=20 Score=35.32 Aligned_cols=28 Identities=14% Similarity=0.312 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 039838 136 AQMVLFPVIENLLSKVQISPQDIDILII 163 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi~~~dID~LI~ 163 (466)
.-+|...|++++++++|++|+||+.+-.
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqviel 297 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIEL 297 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEe
Confidence 3468899999999999999999998876
No 263
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=44.23 E-value=93 Score=32.53 Aligned_cols=43 Identities=2% Similarity=0.031 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHcCCC--cCCcCEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 039838 140 LFPVIENLLSKVQIS--PQDIDILIINCSGFCPSPSLSSIIINKYSMKS 186 (466)
Q Consensus 140 a~~Aa~~aL~~agi~--~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~ 186 (466)
...|++++++++|++ ++|||++=+.- .+....-+..+.||+.+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~D----~Fs~~~l~~~e~lGl~~ 312 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVHD----CFSITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEec----CChHHHHHHHHHcCCCC
Confidence 457999999999998 79999986641 13344555667777653
No 264
>PRK00768 nadE NAD synthetase; Reviewed
Probab=42.44 E-value=3.5e+02 Score=26.80 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=56.5
Q ss_pred hHHHHHhhccccCCChh-----hHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 039838 80 FSSFLENSSLVETFDSE-----SMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMVLFPVIENLLSKVQIS 154 (466)
Q Consensus 80 ~e~~~~~~~~~~~~~~~-----~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~ 154 (466)
++++++.++....++.+ ..+|++..++++|.+.- ++.-. -.. +.| +...-+.+++..-+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~l~~~g~~g~-VlGlS-------GGI----DSa--v~a~L~~~A~~~~~~~ 68 (268)
T PRK00768 3 QQEIIAELGVKPTIDPEEEIRRRVDFLKDYLKKSGLKSL-VLGIS-------GGQ----DST--LAGRLAQLAVEELRAE 68 (268)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeE-EEECC-------CCH----HHH--HHHHHHHHHHHHhccc
Confidence 45666666655444443 34677777888886554 33210 011 111 2222233444433322
Q ss_pred cCCcCEEEEe-ecCCC--CCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHH
Q 039838 155 PQDIDILIIN-CSGFC--PSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAI 205 (466)
Q Consensus 155 ~~dID~LI~~-~s~~~--~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL 205 (466)
....+..+++ +.|.. .....|..+++.+|+. +...+||.. -..++...+
T Consensus 69 ~~~~~~~~~~l~mP~~~~~~~~da~~la~~lgi~-~~~~i~I~~-~~~~~~~~l 120 (268)
T PRK00768 69 TGDDDYQFIAVRLPYGVQADEDDAQDALAFIQPD-RVLTVNIKP-AVDASVAAL 120 (268)
T ss_pred ccCcceeEEEEECCCCCcCCHHHHHHHHHhcCCC-eeEEEECHH-HHHHHHHHH
Confidence 2112222222 33432 2346788899999984 478889887 566665544
No 265
>PRK08329 threonine synthase; Validated
Probab=41.82 E-value=64 Score=33.06 Aligned_cols=64 Identities=25% Similarity=0.393 Sum_probs=46.8
Q ss_pred HHHHHHHHH----cCCChhhHHHHHHhHhhcC---ccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhh
Q 039838 370 PVIREIAKN----LKLGERDIEAALMTLHRFG---NQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSK 433 (466)
Q Consensus 370 ~vl~~l~~~----Lgl~~e~~~~s~~~l~~~G---NtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~ 433 (466)
..++.+.+. ..++++.+......+.+.| -.+|+..+..+..+.++|.+++|++|+++-.|.|++
T Consensus 275 ~~~~~l~~~~g~~~~V~d~e~~~a~~~l~~~Gi~vepssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 275 EMLRALEESNGFCISVGEEETRAALHWLRRMGFLVEPTSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred HHHHHHHHhCCEEEEECHHHHHHHHHHHHhcCceECccHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 345555554 5678777655455555444 245777888888888999999999999999999976
No 266
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=41.22 E-value=1.1e+02 Score=31.97 Aligned_cols=41 Identities=7% Similarity=-0.023 Sum_probs=29.3
Q ss_pred HHHHHHHHHHcCCC--cCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 039838 141 FPVIENLLSKVQIS--PQDIDILIINCSGFCPSPSLSSIIINKYSMK 185 (466)
Q Consensus 141 ~~Aa~~aL~~agi~--~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~ 185 (466)
..|++++++++|++ ++|||.+-+. + ......-+..+.||+.
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~---D-~Ft~~~l~~~e~lG~~ 301 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVD---D-RYSYKELQHIEALRLS 301 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEe---c-CChHHHHHHHHHcCCC
Confidence 36999999999997 6999999875 1 1333345556667664
No 267
>PLN02932 3-ketoacyl-CoA synthase
Probab=41.17 E-value=79 Score=34.07 Aligned_cols=77 Identities=6% Similarity=0.090 Sum_probs=46.6
Q ss_pred HHhhhhccCCCCCCCccccccEEEecC----CCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcC
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPV----SGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKE 415 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~----~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g 415 (466)
.+++|+ ++| +. ++|||+++... ..+..--.++++||++.+-. . -+.+-+|++.-++.|..+-.-=
T Consensus 156 a~~aL~-~ag-i~---p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~---~---fdL~gmGCSggl~aL~lA~~ll 224 (478)
T PLN02932 156 VDNLFR-NTG-IS---PSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIK---S---LNLGGMGCSAGVIAIDAAKSLL 224 (478)
T ss_pred HHHHHH-HcC-CC---HHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCce---E---EEeccchhhhHHHHHHHHHHHH
Confidence 456777 778 88 58999997743 34456677899999975421 1 2345567777777775442211
Q ss_pred CCCCCCEEEEEe
Q 039838 416 RVKKGDRVWLIG 427 (466)
Q Consensus 416 ~i~~Gd~vllia 427 (466)
+..++.++++++
T Consensus 225 ~~~~~~~aLVVs 236 (478)
T PLN02932 225 QVHRNTYALVVS 236 (478)
T ss_pred HcCCCCeEEEEE
Confidence 122455555444
No 268
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=41.16 E-value=59 Score=32.94 Aligned_cols=70 Identities=17% Similarity=0.238 Sum_probs=43.8
Q ss_pred HHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCC-------ceEEEecCCcchHHHHHHHHHHHHHhc
Q 039838 142 PVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSD-------IKNFNLSGMGCSASALAIDMAQALLKT 214 (466)
Q Consensus 142 ~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~-------~~~~dl~~mgCs~~l~aL~lA~~ll~~ 214 (466)
-|+.++|+++|+..+|||+.=.|- .+-|-+.+-.++||+.++ +.++.-- .||+|.=.-.-+-..|=+.
T Consensus 324 vAIp~alk~aGL~v~did~FEINE----AFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHP-lGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 324 VAIPKALKAAGLEVDDIDLFEINE----AFASQALYCRNKLGLDPEKVNVNGGAIALGHP-LGATGARCVATLLHEMKRR 398 (435)
T ss_pred hhhHHHHHHcCCcccccceeehhH----HHHHHHHHHHHHhCCCHHHcCCCCceeeccCC-cCCccHhHHHHHHHHHHhh
Confidence 477889999999999999775552 123444566788888632 2222222 3677766555555555444
Q ss_pred CC
Q 039838 215 QK 216 (466)
Q Consensus 215 ~~ 216 (466)
+.
T Consensus 399 gk 400 (435)
T KOG1389|consen 399 GK 400 (435)
T ss_pred cc
Confidence 43
No 269
>PLN02192 3-ketoacyl-CoA synthase
Probab=39.85 E-value=1e+02 Score=33.61 Aligned_cols=77 Identities=8% Similarity=0.078 Sum_probs=48.4
Q ss_pred HHhhhhccCCCCCCCccccccEEEecC----CCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcC
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPV----SGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKE 415 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~----~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g 415 (466)
.+++|+ ++| +. .+|||+++... ..+..-..+++++|+..+-. . -+.+-+|++.-.++|+.+..-=
T Consensus 184 a~~aL~-kaG-i~---p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~-----a-fdLsgmGCSggl~aLdlA~~lL 252 (511)
T PLN02192 184 IDQLLA-KTS-VK---PKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIL-----S-YNLGGMGCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHH-HcC-CC---HHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCce-----E-EEcccchhhhHHHHHHHHHHHH
Confidence 467787 778 88 58999988753 34556677899999974321 1 2345566666666665443211
Q ss_pred CCCCCCEEEEEe
Q 039838 416 RVKKGDRVWLIG 427 (466)
Q Consensus 416 ~i~~Gd~vllia 427 (466)
+..++.++++++
T Consensus 253 ~a~~~~~aLVVs 264 (511)
T PLN02192 253 QVHPNSYALVIS 264 (511)
T ss_pred HcCCCCeEEEEE
Confidence 234677777666
No 270
>PRK06059 lipid-transfer protein; Provisional
Probab=39.85 E-value=72 Score=33.25 Aligned_cols=96 Identities=9% Similarity=0.012 Sum_probs=53.3
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCCCHHHHHHHHHHcCCChh----hHHHH---------HHh----HhhcCccccc
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVSGRPVIREIAKNLKLGER----DIEAA---------LMT----LHRFGNQSSS 402 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~~~~vl~~l~~~Lgl~~e----~~~~s---------~~~----l~~~GNtssa 402 (466)
.+++++ ++| +. .+|||.+-+|-.-...--...+.||+.+. ++-.. .-| +--+||...+
T Consensus 279 ~~~a~~-~ag-l~---~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~ga 353 (399)
T PRK06059 279 LDAAYA-EAG-IG---PEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPA 353 (399)
T ss_pred HHHHHH-HcC-CC---HHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCc
Confidence 456777 778 77 58999999999854443334588999852 11000 001 1236888877
Q ss_pred hHHHHHHHHHHc--C-----CCCCCCEEEEEeechhhhhcceeEE
Q 039838 403 SLWYELAYMEAK--E-----RVKKGDRVWLIGAGTGSKCGSVVLQ 440 (466)
Q Consensus 403 Si~~~L~~~~~~--g-----~i~~Gd~vllia~GsG~~~~s~v~r 440 (466)
+=...+.++..+ | +++...+.+....|.|-..++++++
T Consensus 354 tG~~~~~e~~~qLrg~ag~~Qv~~a~~gl~~~~g~~g~~~~~~l~ 398 (399)
T PRK06059 354 QAIAQVCELTWQLRGQAGGRQVEGARVGITANQGLFGHGSSVIVA 398 (399)
T ss_pred cHHHHHHHHHHHhccCcCCccCCCccEEEEeccCCcccceEEEec
Confidence 666666555442 2 1223334444334443344555543
No 271
>PLN03168 chalcone synthase; Provisional
Probab=39.78 E-value=77 Score=33.10 Aligned_cols=77 Identities=17% Similarity=0.045 Sum_probs=48.6
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCC----CHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcC
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVS----GRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKE 415 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~----~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g 415 (466)
.+++|+ ++| +. ++|||++++... .+..--.+++.||++..-. + ---.|++++.-.+.|..+..-=
T Consensus 109 a~~AL~-~ag-~~---~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~---r---~~d~~~gC~g~~~aL~~A~~~i 177 (389)
T PLN03168 109 AQKAIK-EWG-GR---KSDITHIVFATTSGVNMPGADHALAKLLGLKPTVK---R---VMMYQTGCFGGASVLRVAKDLA 177 (389)
T ss_pred HHHHHH-HcC-CC---HHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcce---e---eeeeCCccHHHHHHHHHHHHHH
Confidence 456777 777 77 589999987543 2344456899999986421 0 1135677788888876543311
Q ss_pred CCCCCCEEEEEe
Q 039838 416 RVKKGDRVWLIG 427 (466)
Q Consensus 416 ~i~~Gd~vllia 427 (466)
+-.++.+|++++
T Consensus 178 ~~~~~~~VLVV~ 189 (389)
T PLN03168 178 ENNKGARVLAVA 189 (389)
T ss_pred HhCCCCEEEEEE
Confidence 124567777665
No 272
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=38.90 E-value=1.9e+02 Score=27.84 Aligned_cols=101 Identities=17% Similarity=0.288 Sum_probs=63.9
Q ss_pred ChhhHHHHHHHHHHcCCCCeeecCCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCc
Q 039838 94 DSESMAFMSKVLTCSGQSEETYLPPALQYIPPKTNQQESIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPS 173 (466)
Q Consensus 94 ~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps 173 (466)
++++...++.+.++.|+.+++..-.... .|+ ..++.-.++++.+....+++++++- .-|.++..|.+ +-+
T Consensus 118 t~rs~~il~~lv~~~g~s~~~~~vrstd-l~v-L~l~~~~~~~~~~l~~~~~~a~~ed-----gAeaIiLGCAG---ms~ 187 (230)
T COG4126 118 TERSRPILEELVRSYGLSRHCRSVRSTD-LPV-LALEGPPEEAEALLVIEAAEALKED-----GAEAIILGCAG---MSD 187 (230)
T ss_pred CcccHHHHHHHHHhcCccccccceeeCC-CCc-ccccCChHHHHHHHHHHHHHHhhhc-----CCCEEEEcCcc---HHH
Confidence 4455556777888889877654211100 011 1222234667778888888888754 47889988864 335
Q ss_pred HHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHhcC
Q 039838 174 LSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLKTQ 215 (466)
Q Consensus 174 ~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~~~ 215 (466)
++.+++..+|++ . +. |-..|+.+|-++++.+
T Consensus 188 la~~Lq~~~gvP----V--ID-----gv~Aav~~a~~L~~~~ 218 (230)
T COG4126 188 LADQLQKAFGVP----V--ID-----GVAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHHhCCC----c--cc-----chHHHHHHHHHHHhhc
Confidence 689999999965 1 22 2456677777777765
No 273
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=38.77 E-value=1.2e+02 Score=30.55 Aligned_cols=81 Identities=4% Similarity=0.011 Sum_probs=53.2
Q ss_pred HHHHHhhhhccCCCCCCCccccccEEEecC----CCHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHH
Q 039838 337 SVIKKGFIKNSCDVYVPNFKAAVQHFCLPV----SGRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYME 412 (466)
Q Consensus 337 ~~v~~~~l~~~~~~~~pd~~~did~~~~H~----~~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~ 412 (466)
...++++|+ ++| +.| +|||.++.+. +.+.+-..+.+++|+..+-. ..+.+=+|++.-.++++-+.
T Consensus 88 f~av~~LL~-ktg-v~p---~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~------~~nLsGMGCsAgliai~lA~ 156 (290)
T PF08392_consen 88 FGAVDDLLA-KTG-VKP---SDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIK------SYNLSGMGCSAGLIAIDLAK 156 (290)
T ss_pred HHHHHHHHH-HcC-CCH---HHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCee------eecccCCcchhhHHHHHHHH
Confidence 345678888 788 884 8999888754 46678888999999987632 13345555555555554332
Q ss_pred HcCCCCCCCEEEEEee
Q 039838 413 AKERVKKGDRVWLIGA 428 (466)
Q Consensus 413 ~~g~i~~Gd~vllia~ 428 (466)
.-=+..||..++.++.
T Consensus 157 ~lL~~~p~~~ALVVst 172 (290)
T PF08392_consen 157 DLLQAHPNSYALVVST 172 (290)
T ss_pred HHHHhCCCcEEEEEEE
Confidence 2223467888887763
No 274
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=36.87 E-value=75 Score=33.27 Aligned_cols=23 Identities=30% Similarity=0.497 Sum_probs=20.9
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEE
Q 039838 141 FPVIENLLSKVQISPQDIDILII 163 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~ 163 (466)
.++++++|+++|++|+|||.+-.
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~ 306 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNP 306 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEc
Confidence 57899999999999999998875
No 275
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=36.08 E-value=1e+02 Score=32.02 Aligned_cols=76 Identities=17% Similarity=0.234 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC--------cHHHHHHHHcCCC--CCceEEEecCCcc
Q 039838 129 QQESIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP--------SLSSIIINKYSMK--SDIKNFNLSGMGC 198 (466)
Q Consensus 129 ~~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P--------s~a~~I~~~lGl~--~~~~~~dl~~mgC 198 (466)
+.+...+--.+-.+|++++++++|+++++||+|=....+-+..| ...+.|+++.|++ .|-++-|+...|=
T Consensus 62 l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a~GGq 141 (365)
T PRK09585 62 LAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVAAGGQ 141 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHhcCCC
Confidence 33444555568889999999999999999998876322222222 2468899999986 2344555554333
Q ss_pred hHHHHH
Q 039838 199 SASALA 204 (466)
Q Consensus 199 s~~l~a 204 (466)
.+=+..
T Consensus 142 GAPLvp 147 (365)
T PRK09585 142 GAPLVP 147 (365)
T ss_pred CCCchH
Confidence 333433
No 276
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=35.75 E-value=34 Score=32.61 Aligned_cols=34 Identities=35% Similarity=0.354 Sum_probs=26.0
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEeechhhhhc
Q 039838 402 SSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCG 435 (466)
Q Consensus 402 aSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~ 435 (466)
-|.|...+.+.+.=.+++||+|+=||.|+|+..+
T Consensus 55 is~P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aA 88 (209)
T COG2518 55 ISAPHMVARMLQLLELKPGDRVLEIGTGSGYQAA 88 (209)
T ss_pred ecCcHHHHHHHHHhCCCCCCeEEEECCCchHHHH
Confidence 3445555666666678999999999999998754
No 277
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=35.50 E-value=37 Score=29.33 Aligned_cols=50 Identities=26% Similarity=0.312 Sum_probs=32.2
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEe-echhhhhcceeEEEecCCC-CCCC-----CCCCccccc
Q 039838 402 SSLWYELAYMEAKERVKKGDRVWLIG-AGTGSKCGSVVLQCLRPIV-GESN-----KGPWAGCVE 459 (466)
Q Consensus 402 aSi~~~L~~~~~~g~i~~Gd~vllia-~GsG~~~~s~v~r~~~~~~-~~~~-----~~~w~~~~~ 459 (466)
|.++++=+++.+-| ++.||+|.+.+ || ..|+++-..-. ++ . .+||++++-
T Consensus 31 a~~~inp~D~~~Lg-v~EGD~VkVkse~G------eVVV~Ak~~~~~~p-G~vfiPmgpWaN~vi 87 (128)
T COG1153 31 AVCEINPEDMKQLG-VSEGDKVKVKSEFG------EVVVKAKEADGVQP-GMVFIPMGPWANVVI 87 (128)
T ss_pred eEEEECHHHHHHhC-CCcCCeEEEEecCc------cEEEEEeeCCCCCC-CeEEecCCcccceee
Confidence 33444445554443 68999999988 77 56777765432 22 2 589999874
No 278
>PLN02377 3-ketoacyl-CoA synthase
Probab=35.25 E-value=1.1e+02 Score=33.20 Aligned_cols=77 Identities=9% Similarity=0.081 Sum_probs=44.1
Q ss_pred HHhhhhccCCCCCCCccccccEEEecCC----CHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcC
Q 039838 340 KKGFIKNSCDVYVPNFKAAVQHFCLPVS----GRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKE 415 (466)
Q Consensus 340 ~~~~l~~~~~~~~pd~~~did~~~~H~~----~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g 415 (466)
.+++|+ ++| +. ++|||+++.... .+..--.++++||+.++-. . -+.+-+|++.-.+.|..+.+-=
T Consensus 180 ~~~aL~-kaG-i~---p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~-----a-fdL~gmGCsggl~aL~lA~~ll 248 (502)
T PLN02377 180 LDNLFA-NTN-VN---PKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIR-----S-FNLGGMGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHH-HcC-CC---HHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCe-----E-EecccchhhHHHHHHHHHHHHH
Confidence 456777 778 87 589999988332 3466677899999975421 1 1223345555555554332110
Q ss_pred CCCCCCEEEEEe
Q 039838 416 RVKKGDRVWLIG 427 (466)
Q Consensus 416 ~i~~Gd~vllia 427 (466)
+..++.++++++
T Consensus 249 ~~~~~~~aLVVs 260 (502)
T PLN02377 249 QVHRNTYAVVVS 260 (502)
T ss_pred HcCCCCEEEEEE
Confidence 123456666554
No 279
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=33.36 E-value=53 Score=32.35 Aligned_cols=49 Identities=24% Similarity=0.451 Sum_probs=35.6
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 039838 141 FPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSG 195 (466)
Q Consensus 141 ~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~ 195 (466)
+.|++.+|.++|++-+|||++=+|- -..|. .-.+++.|+++ +.-.|++|
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNE---AFApQ-~LAv~r~L~ld--~sKlNVNG 344 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNE---AFAPQ-YLAVERSLDLD--ISKLNVNG 344 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEech---hhchH-HHHHHHhhCCC--hhhccccC
Confidence 4688999999999999999988873 12232 23467888884 66677776
No 280
>PF11392 DUF2877: Protein of unknown function (DUF2877); InterPro: IPR021530 This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.
Probab=32.55 E-value=85 Score=26.62 Aligned_cols=45 Identities=18% Similarity=0.218 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHH
Q 039838 368 GRPVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYME 412 (466)
Q Consensus 368 ~~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~ 412 (466)
+..+.+.+..-.+-+++.+++....+-++||+|..+..+.+...+
T Consensus 65 ~~~~~~l~~~l~~~~~~~~~~~i~~ll~iGhTSG~D~L~Gi~~~l 109 (110)
T PF11392_consen 65 SEPLLRLLHALSSGDSEDLEEAIRRLLAIGHTSGADTLLGILLGL 109 (110)
T ss_pred hHHHHHHHHHHHcCCchHHHHHHHHHHHcCCCchHHHHHHHHHHh
Confidence 344444444433443456666788888999999999999887654
No 281
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=31.82 E-value=2.5e+02 Score=31.26 Aligned_cols=45 Identities=7% Similarity=0.147 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMK 185 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~ 185 (466)
....++++|+++|++++|||.|+... .....|....+|.+.+|..
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvG-GssriP~v~~~l~~~fg~~ 355 (616)
T PRK05183 311 TLLACRRALRDAGVEADEVKEVVMVG-GSTRVPLVREAVGEFFGRT 355 (616)
T ss_pred HHHHHHHHHHHcCCCcccCCEEEEEC-CcccChHHHHHHHHHhccC
Confidence 34556889999999999999999853 1235888999999999864
No 282
>PRK13410 molecular chaperone DnaK; Provisional
Probab=31.57 E-value=1.6e+02 Score=33.24 Aligned_cols=65 Identities=20% Similarity=0.242 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHH
Q 039838 138 MVLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAID 206 (466)
Q Consensus 138 ~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~ 206 (466)
+-....++++|+++|++++|||.|+.... ....|..-.+|...+|.. ...+++..-|.+.-.|+.
T Consensus 309 ~r~~~~i~~~L~~ag~~~~dId~VvLVGG-ssRiP~V~~~l~~~fg~~---~~~~~npdeaVA~GAAi~ 373 (668)
T PRK13410 309 DRLLRPVKRALKDAGLSPEDIDEVVLVGG-STRMPMVQQLVRTLIPRE---PNQNVNPDEVVAVGAAIQ 373 (668)
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECC-ccccHHHHHHHHHHcCCC---cccCCCCchHHHHhHHHH
Confidence 34455678999999999999999997531 235899999999999854 223344433444444443
No 283
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=30.86 E-value=1.5e+02 Score=30.48 Aligned_cols=71 Identities=20% Similarity=0.251 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHcCC-CcCCcCEEEEeecCCCCCCcHHHHHHHH-cCCCCCceEEEecCCcchHHHHHHHHHHHH
Q 039838 136 AQMVLFPVIENLLSKVQI-SPQDIDILIINCSGFCPSPSLSSIIINK-YSMKSDIKNFNLSGMGCSASALAIDMAQAL 211 (466)
Q Consensus 136 a~~la~~Aa~~aL~~agi-~~~dID~LI~~~s~~~~~Ps~a~~I~~~-lGl~~~~~~~dl~~mgCs~~l~aL~lA~~l 211 (466)
-.+...+|++++++++|+ +|.|+-.|-+=| |.++....--.+ =|-+ -+..--...|+=|-+..||.+|-.|
T Consensus 130 qV~~vA~aV~~aM~~AGI~dpaDVH~VQvKc----PLLT~~~i~~A~~RG~~-~~t~dt~~SM~~SrgASALGvAvAL 202 (365)
T PF09663_consen 130 QVEEVAAAVRAAMADAGITDPADVHFVQVKC----PLLTSERIADAKARGKT-VATEDTYESMAYSRGASALGVAVAL 202 (365)
T ss_pred HHHHHHHHHHHHHHHcCCCChhheeeEEecC----CcCCHHHHHHHHhCCCc-eeecccccccccccchhHHHHHHHh
Confidence 455677899999999999 899988877655 444433322222 1221 1111123335555566667777665
No 284
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=30.68 E-value=36 Score=35.06 Aligned_cols=46 Identities=20% Similarity=0.179 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCCcHHHHHHHHcCC
Q 039838 139 VLFPVIENLLSKVQISPQDIDILII-NCSGFCPSPSLSSIIINKYSM 184 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~-~~s~~~~~Ps~a~~I~~~lGl 184 (466)
-+..|.+++|+++|+.|+|||.|=- ++|+..---.-+..|.+-++-
T Consensus 302 Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 302 GAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGE 348 (440)
T ss_pred hHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhcc
Confidence 5778899999999999999998863 554322111223345555543
No 285
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=30.37 E-value=2.9e+02 Score=30.64 Aligned_cols=45 Identities=11% Similarity=0.231 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMK 185 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~ 185 (466)
....++++|+++|++++|||.|+... .....|..-.+|.+.+|..
T Consensus 295 i~~~i~~~L~~a~~~~~~id~ViLvG-GssriP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 295 TLSICRRALRDAGLSVEEIKGVVLVG-GSTRMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEEC-CcCCChHHHHHHHHHhCCC
Confidence 45667889999999999999999753 1235899999999999864
No 286
>PLN02854 3-ketoacyl-CoA synthase
Probab=30.31 E-value=2e+02 Score=31.47 Aligned_cols=42 Identities=10% Similarity=0.252 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHcCCCc------CCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 039838 140 LFPVIENLLSKVQISP------QDIDILIINCSGFCPSPSLSSIIINKYSMK 185 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~------~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~ 185 (466)
+...+++.|+++|+++ +|||..+... .-...-..++++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHq----ggr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHA----GGRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECC----CCHHHHHHHHHHcCCC
Confidence 5678889999999987 6899877642 1233445788999996
No 287
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=26.15 E-value=44 Score=25.89 Aligned_cols=36 Identities=17% Similarity=0.056 Sum_probs=21.4
Q ss_pred CCCChHHHHHhhccccCCChhhHHHHHHHHHHcCCC
Q 039838 76 CRVPFSSFLENSSLVETFDSESMAFMSKVLTCSGQS 111 (466)
Q Consensus 76 ~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~ 111 (466)
++|.-..+...+...+--+++++..+.+++++.|+.
T Consensus 11 ~~V~g~~ie~~~~~~~~~~~e~~~rf~~~L~~~Gv~ 46 (69)
T PF09269_consen 11 FVVEGPKIERLVAMTNFDDEESLRRFQRKLKKMGVE 46 (69)
T ss_dssp EEEE-HHHHHHHTTEEE-TGGGHHHHHHHHHHTTHH
T ss_pred EEEEChHHHHHHHhcCCCCHHHHHHHHHHHHHCCHH
Confidence 446656666655555434566777667777777763
No 288
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=25.82 E-value=88 Score=24.19 Aligned_cols=34 Identities=12% Similarity=0.007 Sum_probs=18.4
Q ss_pred CChHHHHHhhccccCCChhhHHHHHHHHHHcCCC
Q 039838 78 VPFSSFLENSSLVETFDSESMAFMSKVLTCSGQS 111 (466)
Q Consensus 78 v~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~ 111 (466)
|+-..+...+....--++++...+.+++++.|+.
T Consensus 13 V~g~~ier~~~~~~~~~~e~~~~f~~~L~~~Gv~ 46 (69)
T TIGR03595 13 VSGKKIERWVAKTPFNNDENLRRFARKLKKLGVE 46 (69)
T ss_pred EechHHHHHHHHcCCCCHHHHHHHHHHHHHCCHH
Confidence 4444444444433322455666666777777763
No 289
>PRK07591 threonine synthase; Validated
Probab=25.80 E-value=1.5e+02 Score=31.37 Aligned_cols=74 Identities=14% Similarity=0.096 Sum_probs=51.6
Q ss_pred CHHHHHHHHH----HcCCChhhHHHHHHhHhh-cCcc---ccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeE
Q 039838 368 GRPVIREIAK----NLKLGERDIEAALMTLHR-FGNQ---SSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVL 439 (466)
Q Consensus 368 ~~~vl~~l~~----~Lgl~~e~~~~s~~~l~~-~GNt---ssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~ 439 (466)
+...++.+.+ ...++++++......+.+ .|-. +|+..+..+..+.++|.++++++|+++-.|.|.+--..+-
T Consensus 319 ~~~~~~~i~~~~g~~v~Vsd~ei~~a~~~la~~eGi~~epssaaalAal~~l~~~g~i~~~~~VV~i~tG~G~kd~~~~~ 398 (421)
T PRK07591 319 GPYALDIARRTGGAIEDVTDEEIIEGIKLLARTEGIFTETAGGVTVAVLKKLVEAGKIDPDEETVVYITGNGLKTLEAVA 398 (421)
T ss_pred cHHHHHHHHHhCCEEEEECHHHHHHHHHHHHhcCCeeecchHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCccCCHHHHH
Confidence 4455666655 346777776555555544 5544 6777778888888888999999999999999987655443
Q ss_pred EE
Q 039838 440 QC 441 (466)
Q Consensus 440 r~ 441 (466)
+.
T Consensus 399 ~~ 400 (421)
T PRK07591 399 GY 400 (421)
T ss_pred Hh
Confidence 33
No 290
>PLN03184 chloroplast Hsp70; Provisional
Probab=24.81 E-value=2.4e+02 Score=31.77 Aligned_cols=63 Identities=19% Similarity=0.203 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAID 206 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~ 206 (466)
....++++|++++++++|||.|++... ....|..-.+|.+.+|.. ....++..-|.+.-.|+.
T Consensus 348 ~~~~i~~~L~~a~~~~~dId~ViLvGG-ssriP~V~~~i~~~fg~~---~~~~~npdeaVA~GAAi~ 410 (673)
T PLN03184 348 CKTPVENALRDAKLSFKDIDEVILVGG-STRIPAVQELVKKLTGKD---PNVTVNPDEVVALGAAVQ 410 (673)
T ss_pred HHHHHHHHHHHcCCChhHccEEEEECC-ccccHHHHHHHHHHhCCC---cccccCcchHHHHHHHHH
Confidence 445678899999999999999998531 235899999999999864 233455434444444443
No 291
>CHL00094 dnaK heat shock protein 70
Probab=24.16 E-value=2.4e+02 Score=31.40 Aligned_cols=45 Identities=18% Similarity=0.257 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMK 185 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~ 185 (466)
....++++|+++|+++++||.|+.... ....|.+-.++.+.+|..
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 311 CRIPVENALKDAKLDKSDIDEVVLVGG-STRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECC-ccCChHHHHHHHHHhCCC
Confidence 344578999999999999999998641 245899999999999854
No 292
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=24.04 E-value=2.1e+02 Score=26.22 Aligned_cols=82 Identities=17% Similarity=0.190 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHc--CCCcCCcCEEEE-eecCCCCCC--cHHHHHHHHcCCCCCceEEEecCCcchHHHHHHHHHHHHHh
Q 039838 139 VLFPVIENLLSKV--QISPQDIDILII-NCSGFCPSP--SLSSIIINKYSMKSDIKNFNLSGMGCSASALAIDMAQALLK 213 (466)
Q Consensus 139 la~~Aa~~aL~~a--gi~~~dID~LI~-~~s~~~~~P--s~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~lA~~ll~ 213 (466)
-+..++++.+++- .-.-+.|+++++ +.+.....| +....+...+.- . .... |-.+.-.||..|.++++
T Consensus 28 ~ak~~~~~fi~~~~~~~~~~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~~---~--~~~~--G~t~l~~aL~~A~~~l~ 100 (183)
T cd01453 28 VVLKLLELFIEEFFDQNPISQLGIISIKNGRAEKLTDLTGNPRKHIQALKT---A--RECS--GEPSLQNGLEMALESLK 100 (183)
T ss_pred HHHHHHHHHHHHHhhcCccccEEEEEEcCCccEEEECCCCCHHHHHHHhhc---c--cCCC--CchhHHHHHHHHHHHHh
Confidence 3445555555542 122356999999 554443333 223345555431 1 1122 45788899999999997
Q ss_pred cCC---CCeEEEEEecc
Q 039838 214 TQK---DSDALVLSTEI 227 (466)
Q Consensus 214 ~~~---~~~aLVVs~E~ 227 (466)
..+ .++++|+.++.
T Consensus 101 ~~~~~~~~~iiil~sd~ 117 (183)
T cd01453 101 HMPSHGSREVLIIFSSL 117 (183)
T ss_pred cCCccCceEEEEEEcCC
Confidence 532 45678887663
No 293
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=23.62 E-value=2e+02 Score=27.01 Aligned_cols=34 Identities=29% Similarity=0.313 Sum_probs=26.9
Q ss_pred cchHHHHHHHHHHcCCCCCCCEEEEEeechhhhh
Q 039838 401 SSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKC 434 (466)
Q Consensus 401 saSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~ 434 (466)
+.+.+...+.+.+.-.+++|++|+=+|.|+|+..
T Consensus 58 ~~~~p~~~~~~~~~l~~~~g~~VLdIG~GsG~~t 91 (212)
T PRK13942 58 TISAIHMVAIMCELLDLKEGMKVLEIGTGSGYHA 91 (212)
T ss_pred EeCcHHHHHHHHHHcCCCCcCEEEEECCcccHHH
Confidence 4455666677777667899999999999999865
No 294
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=23.48 E-value=2.6e+02 Score=31.17 Aligned_cols=64 Identities=17% Similarity=0.176 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHH
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAID 206 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~ 206 (466)
=....++++|+++|+++++||.|+.... ....|.+-.+|.+.+|.. ...+++..-|.+.-.|+.
T Consensus 308 ~~~~~i~~~l~~a~~~~~~id~ViLvGG-ssriP~v~~~l~~~fg~~---~~~~~npdeava~GAa~~ 371 (627)
T PRK00290 308 RTIEPCKQALKDAGLSVSDIDEVILVGG-STRMPAVQELVKEFFGKE---PNKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHcCCChhhCcEEEEECC-cCCChHHHHHHHHHhCCC---CCcCcCChHHHHHhHHHH
Confidence 3455678899999999999999998531 235899999999999864 223344434555444443
No 295
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=23.22 E-value=1.6e+02 Score=30.51 Aligned_cols=42 Identities=14% Similarity=0.249 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEee--cCCCCCCc
Q 039838 132 SIKEAQMVLFPVIENLLSKVQISPQDIDILIINC--SGFCPSPS 173 (466)
Q Consensus 132 ~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~--s~~~~~Ps 173 (466)
.+|...+|......+++++++++.+|+|.||=++ +-.+..|.
T Consensus 61 tresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTGV~Agf~spe 104 (445)
T TIGR03285 61 TRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTGVTAGFASPE 104 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCChhhccEEEeccceeeccCCHH
Confidence 4677778999999999999999999999998654 33444553
No 296
>PF06924 DUF1281: Protein of unknown function (DUF1281); InterPro: IPR009694 This family consists of several hypothetical enterobacterial proteins of around 170 residues in length. Members of this family are found in Escherichia coli, Salmonella typhimurium and Shigella species. The function of this family is unknown.; PDB: 2IJR_A.
Probab=23.01 E-value=22 Score=31.24 Aligned_cols=38 Identities=16% Similarity=0.182 Sum_probs=26.6
Q ss_pred CChHHHHHhhccccCCChhhHHHHHHHHHHcCCCCeee
Q 039838 78 VPFSSFLENSSLVETFDSESMAFMSKVLTCSGQSEETY 115 (466)
Q Consensus 78 v~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~ 115 (466)
.-.+..++.+.....+|++..+.++++...|||+.+++
T Consensus 71 ~AF~~Wl~lL~~~~~Ld~~~~~~i~~l~~QSGi~~~~W 108 (134)
T PF06924_consen 71 QAFTQWLGLLQKDVWLDPETCRRIHRLWLQSGIGARRW 108 (134)
T ss_dssp HHHHHHHHHHHTT-B-SSHHHHHHHHHHHTT-GGG--T
T ss_pred ccHHHHHHHHHhCCcCCHHHHHHHHHHHHHcCcccccc
Confidence 34556666666666689999999999999999999987
No 297
>PF11394 DUF2875: Protein of unknown function (DUF2875); InterPro: IPR021531 This family of proteins with unknown function appear to be restricted to Proteobacteria.
Probab=22.98 E-value=1.6e+02 Score=31.09 Aligned_cols=64 Identities=17% Similarity=0.173 Sum_probs=43.4
Q ss_pred CChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeechhhhhcceeEEEecCCCCC
Q 039838 381 LGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSKCGSVVLQCLRPIVGE 448 (466)
Q Consensus 381 l~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~~~s~v~r~~~~~~~~ 448 (466)
+.-+.+...++.-+|.||||.+|.+..++-+.-.+ -+.|.-...+-.+.- +.+.+--+.|-...
T Consensus 374 ~~ldd~~egydi~rrlGntG~ss~~v~i~La~ia~-y~~gg~sa~vnlr~~---g~Ati~mvsPPd~a 437 (451)
T PF11394_consen 374 PELDDVKEGYDIGRRLGNTGVSSALVQIALALIAS-YHDGGPSAVVNLRPD---GSATIVMVSPPDEA 437 (451)
T ss_pred CCccchhhhccHHHhhhhcccchHHHHHHHHHHhh-ccCCCeeEEEecCCC---CceEEEEecCCChh
Confidence 44455666788899999999999999998766543 356776666666654 33444445555444
No 298
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=22.97 E-value=2.3e+02 Score=31.28 Aligned_cols=64 Identities=17% Similarity=0.189 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHH
Q 039838 139 VLFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAID 206 (466)
Q Consensus 139 la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~ 206 (466)
=....++++|+++|+++++||.|++... ....|..-.+|.+.+|.. ...+++..-|.+.-.|+.
T Consensus 306 ~~~~~i~~~l~~a~~~~~~i~~V~LvGG-ssriP~v~~~i~~~f~~~---~~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 306 RTKEPVRQALKDAGLSASDIDEVILVGG-STRIPAVQELVKDFFGKE---PNKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHHcCCCHhHCcEEEEECC-cccChHHHHHHHHHhCCc---ccCCcCcHHHHHHHHHHH
Confidence 3455678899999999999999998531 235899999999999843 223344334544444443
No 299
>COG0776 HimA Bacterial nucleoid DNA-binding protein [DNA replication, recombination, and repair]
Probab=22.93 E-value=1.9e+02 Score=23.90 Aligned_cols=45 Identities=36% Similarity=0.494 Sum_probs=30.0
Q ss_pred HHHHHHHHHcCCChhhHHHHHHhHhhcCccccchHHHHHHHHHHcCCCCCCCEEEEEeech
Q 039838 370 PVIREIAKNLKLGERDIEAALMTLHRFGNQSSSSLWYELAYMEAKERVKKGDRVWLIGAGT 430 (466)
Q Consensus 370 ~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNtssaSi~~~L~~~~~~g~i~~Gd~vllia~Gs 430 (466)
.+++.+++..+++..+.+.....+ |+...+ .+..||.|-+.+||.
T Consensus 6 eli~~ia~~~~l~k~~a~~~v~~~--------------~~~i~~--aL~~G~~V~l~gFG~ 50 (94)
T COG0776 6 ELIDAIAEKAGLSKKDAEEAVDAF--------------LEEITE--ALAKGERVELRGFGT 50 (94)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHH--------------HHHHHH--HHHcCCeEEEeeeee
Confidence 467889999999887664322221 222222 356899999999986
No 300
>PRK13411 molecular chaperone DnaK; Provisional
Probab=22.62 E-value=2.4e+02 Score=31.65 Aligned_cols=45 Identities=22% Similarity=0.356 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCC
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMK 185 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~ 185 (466)
....++++|+++|++++|||.|+... .....|.+-.+|.+.+|-+
T Consensus 310 ~~~~i~~~L~~a~~~~~~id~ViLvG-GssriP~v~~~l~~~f~~~ 354 (653)
T PRK13411 310 TIEPMQQALKDAGLKPEDIDRVILVG-GSTRIPAVQEAIQKFFGGK 354 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEEC-CCCCcchHHHHHHHHcCCc
Confidence 45567899999999999999998753 1235899999999999743
No 301
>cd03765 proteasome_beta_bacterial Bacterial proteasome, beta subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=22.46 E-value=1.2e+02 Score=29.35 Aligned_cols=32 Identities=9% Similarity=0.226 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEe
Q 039838 133 IKEAQMVLFPVIENLLSKVQISPQDIDILIIN 164 (466)
Q Consensus 133 ~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~ 164 (466)
.|||..++..|++.++++-..++..|++.++.
T Consensus 167 ~eeai~la~~al~~a~~rd~~sg~~iev~vI~ 198 (236)
T cd03765 167 LEDAAKCALVSMDSTMRSNLSVGPPLDLLVYE 198 (236)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEE
Confidence 47899999999999999999999999999985
No 302
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=22.24 E-value=3.4e+02 Score=30.52 Aligned_cols=63 Identities=8% Similarity=0.089 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAID 206 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~ 206 (466)
....++++|+++|++++|||.|+... ....+|..-.+|...+|.. .. .+++-.-|.+.-.|+.
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVG-GssriP~V~~~l~~~fg~~-~~--~~~nPdeaVA~GAAi~ 398 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVG-GMTRMPKVVEEVKKFFQKD-PF--RGVNPDEAVALGAATL 398 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEEC-CcccChHHHHHHHHHhCCC-cc--ccCCCchHHHHhHHHH
Confidence 34557889999999999999999753 1235899999999999864 22 3344434444444443
No 303
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=22.20 E-value=5.9e+02 Score=23.02 Aligned_cols=52 Identities=8% Similarity=0.005 Sum_probs=29.3
Q ss_pred cCCCceEEEEeeeecC-CCC--CCCChHHHHHhhccccCCChhhHHHHHHHHHHcC
Q 039838 57 SKPSVTYLVDFSCYKP-PCF--CRVPFSSFLENSSLVETFDSESMAFMSKVLTCSG 109 (466)
Q Consensus 57 ~~~~~v~I~~~~~~~P-~~~--~rv~~e~~~~~~~~~~~~~~~~~~f~~~i~~~sG 109 (466)
.|...+...|.-++.= +.. ..||.+.+-+.+ ..+.-+++.+.-++|++++-|
T Consensus 86 YrfEDIdvLDLRVCYNGEWy~tr~vs~~ai~~iL-~~p~V~~~~K~~i~~i~~~Kg 140 (155)
T PF10777_consen 86 YRFEDIDVLDLRVCYNGEWYNTRFVSDQAIDKIL-QSPQVPDEIKQGIQRIISTKG 140 (155)
T ss_pred eeecccCeeEEeEEEcceeeeeccCCHHHHHHHH-cCCCCCHHHHHHHHHHHHhCC
Confidence 3555677888764443 321 126655554443 345556666666777776644
No 304
>TIGR03844 cysteate_syn cysteate synthase. Members of this family are cysteate synthase, an enzyme of alternate pathway to sulfopyruvate, a precursor of coenzyme M.
Probab=21.78 E-value=1.6e+02 Score=30.81 Aligned_cols=64 Identities=14% Similarity=0.078 Sum_probs=48.2
Q ss_pred HHHHHHHHHc----CCChhhHHHHHHhHhh-cCc---cccchHHHHHHHHHHcCCCCCCCEEEEEeechhhh
Q 039838 370 PVIREIAKNL----KLGERDIEAALMTLHR-FGN---QSSSSLWYELAYMEAKERVKKGDRVWLIGAGTGSK 433 (466)
Q Consensus 370 ~vl~~l~~~L----gl~~e~~~~s~~~l~~-~GN---tssaSi~~~L~~~~~~g~i~~Gd~vllia~GsG~~ 433 (466)
.+++.+.+.- .++++.+..+...|.+ -|. .+|+..+-.|..+.++|.++++++|+++-.|.|++
T Consensus 310 ~~l~air~~~g~~v~Vsd~eI~~A~~~l~~~~gi~vEpa~A~alAal~k~~~~g~i~~~~~Vv~vlTG~glK 381 (398)
T TIGR03844 310 GVFDALIATGGQMYGVSNKEAVSAGKLFEESEGIDILPAAAVAVAALVKAVESGFIGPDDDILLNITGGGYK 381 (398)
T ss_pred HHHHHHHHhCCEEEEECHHHHHHHHHHHHhhCCccccccHHHHHHHHHHHHHhCCCCCCCeEEEEECCcchh
Confidence 3567777654 4688888766666654 454 56777777777777888999999999999999976
No 305
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=21.71 E-value=2.8e+02 Score=31.15 Aligned_cols=64 Identities=13% Similarity=0.186 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcchHHHHHHH
Q 039838 140 LFPVIENLLSKVQISPQDIDILIINCSGFCPSPSLSSIIINKYSMKSDIKNFNLSGMGCSASALAID 206 (466)
Q Consensus 140 a~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~~mgCs~~l~aL~ 206 (466)
....++++|++++++++|||.|++... ....|..-.+|.+.+|-+. ...+++..-|.+.-.|+.
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~i~~~f~~~~--~~~~~npdeaVA~GAa~~ 378 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGG-STRIPKVQSLIKDFFNGKE--PCKSINPDEAVAYGAAVQ 378 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECC-CCCChhHHHHHHHHhCCCC--CCCCCCcchHHhhhhhhh
Confidence 345678999999999999999997531 2358999999999997531 223344334444444443
No 306
>PF08784 RPA_C: Replication protein A C terminal; InterPro: IPR014892 This protein corresponds to the C-terminal of the single stranded DNA binding protein RPA (replication protein A). RPA is involved in many DNA metabolic pathways including DNA replication, DNA repair, recombination, cell cycle and DNA damage checkpoints. ; PDB: 1QUQ_C 2PQA_C 3KDF_B 2Z6K_B 2PI2_B 1L1O_E 1DPU_A 1Z1D_A.
Probab=21.06 E-value=1.1e+02 Score=25.09 Aligned_cols=31 Identities=32% Similarity=0.430 Sum_probs=25.8
Q ss_pred HHHHHHHcCCChhhHHHHHHhHhhcCccccc
Q 039838 372 IREIAKNLKLGERDIEAALMTLHRFGNQSSS 402 (466)
Q Consensus 372 l~~l~~~Lgl~~e~~~~s~~~l~~~GNtssa 402 (466)
+++|++.|+++.++++.....|-.-|+++|.
T Consensus 68 v~~I~~~l~~~~~~v~~al~~L~~eG~IYsT 98 (102)
T PF08784_consen 68 VDEIAQQLGMSENEVRKALDFLSNEGHIYST 98 (102)
T ss_dssp HHHHHHHSTS-HHHHHHHHHHHHHTTSEEES
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHhCCeEecc
Confidence 5888899999999998888888888988764
No 307
>PF12244 DUF3606: Protein of unknown function (DUF3606); InterPro: IPR022037 This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=20.68 E-value=93 Score=23.14 Aligned_cols=29 Identities=21% Similarity=0.247 Sum_probs=24.5
Q ss_pred HHHHHHHHHHcCCChhhHHHHHHhHhhcCccc
Q 039838 369 RPVIREIAKNLKLGERDIEAALMTLHRFGNQS 400 (466)
Q Consensus 369 ~~vl~~l~~~Lgl~~e~~~~s~~~l~~~GNts 400 (466)
..=++.+++.||++++++ +.-..+.||..
T Consensus 20 ~~ev~ywa~~~gvt~~~L---~~AV~~vG~~~ 48 (57)
T PF12244_consen 20 PYEVRYWAKRFGVTEEQL---REAVRAVGNSR 48 (57)
T ss_pred HHHHHHHHHHHCcCHHHH---HHHHHHHCcCH
Confidence 455688999999999999 78889999873
No 308
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=20.56 E-value=2e+02 Score=29.90 Aligned_cols=67 Identities=13% Similarity=0.201 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC----------cHHHHHHHHcCCCC--CceEEEecC
Q 039838 129 QQESIKEAQMVLFPVIENLLSKVQISPQDIDILIINCSGFCPSP----------SLSSIIINKYSMKS--DIKNFNLSG 195 (466)
Q Consensus 129 ~~~~~~ea~~la~~Aa~~aL~~agi~~~dID~LI~~~s~~~~~P----------s~a~~I~~~lGl~~--~~~~~dl~~ 195 (466)
+.+.+++-...-.+|++.++++.++.|+||+.|.+-.-+-++.| ....+|+++.|++. +.++=|+-.
T Consensus 64 ~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a~ 142 (371)
T COG2377 64 LAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMAA 142 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccHhhhccccccc
Confidence 34455556667788999999999999999997665321111111 35689999999862 234445543
No 309
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=20.21 E-value=2.8e+02 Score=28.47 Aligned_cols=32 Identities=13% Similarity=0.359 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHcCC-CcCCcCEEEEee
Q 039838 134 KEAQMVLFPVIENLLSKVQI-SPQDIDILIINC 165 (466)
Q Consensus 134 ~ea~~la~~Aa~~aL~~agi-~~~dID~LI~~~ 165 (466)
..-.+....|++++++++|+ +|.|+-.+-+=|
T Consensus 129 ~aqV~~vA~aV~~AM~~AGI~dpaDVH~VQvKc 161 (366)
T TIGR02714 129 TAQITETAAAVKRAMRDAGIADPADVHFVQVKC 161 (366)
T ss_pred HHHHHHHHHHHHHHHHHcCCCChhHeeEEEecC
Confidence 34566788999999999999 889988776655
Done!