Query 039840
Match_columns 198
No_of_seqs 225 out of 1775
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 03:23:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nlt_A Protein YDJ1, mitochond 100.0 1.6E-35 5.5E-40 253.1 15.7 135 54-198 40-208 (248)
2 3lz8_A Putative chaperone DNAJ 100.0 1.2E-28 4.2E-33 218.3 13.9 150 22-198 116-275 (329)
3 3agx_A DNAJ homolog subfamily 100.0 1.5E-28 5.2E-33 201.1 12.3 105 85-198 27-137 (181)
4 2q2g_A HSP40 protein, heat sho 99.9 6.8E-25 2.3E-29 179.1 12.3 95 95-198 36-137 (180)
5 1c3g_A Heat shock protein 40; 99.9 4E-24 1.4E-28 173.1 10.5 91 99-198 34-131 (170)
6 1xao_A YDJ1, mitochondrial pro 99.3 5.5E-13 1.9E-17 102.2 4.9 50 140-198 2-53 (121)
7 3i38_A Putative chaperone DNAJ 99.3 1.3E-12 4.3E-17 98.6 4.3 49 140-198 7-55 (109)
8 2ctt_A DNAJ homolog subfamily 98.3 1.6E-07 5.5E-12 69.5 0.8 59 47-107 22-103 (104)
9 3i38_A Putative chaperone DNAJ 97.8 2.8E-05 9.4E-10 58.1 5.5 37 102-139 39-75 (109)
10 1exk_A DNAJ protein; extended 97.7 2.8E-05 9.7E-10 54.1 3.8 48 48-98 6-77 (79)
11 1xao_A YDJ1, mitochondrial pro 97.6 8.3E-05 2.8E-09 56.4 5.5 40 100-139 33-75 (121)
12 3agx_A DNAJ homolog subfamily 97.0 0.0011 3.8E-08 53.4 5.9 40 100-139 119-160 (181)
13 2q2g_A HSP40 protein, heat sho 96.9 0.0013 4.5E-08 52.8 5.9 39 101-139 120-160 (180)
14 1c3g_A Heat shock protein 40; 96.9 0.00097 3.3E-08 53.1 4.9 40 100-139 113-154 (170)
15 1nlt_A Protein YDJ1, mitochond 96.6 0.0016 5.6E-08 54.8 4.6 40 100-139 188-230 (248)
16 3lz8_A Putative chaperone DNAJ 96.6 0.0025 8.5E-08 56.0 5.5 36 103-139 260-295 (329)
17 3lcz_A YCZA, inhibitor of trap 93.0 0.029 9.9E-07 36.6 1.0 15 86-100 24-38 (53)
18 2bx9_A Anti-trap, AT, tryptoph 86.5 0.22 7.7E-06 32.3 1.1 14 86-99 24-37 (53)
19 3lcz_A YCZA, inhibitor of trap 73.6 1.9 6.5E-05 27.8 2.2 21 53-73 10-38 (53)
20 3zsj_A Galectin-3; sugar bindi 45.2 91 0.0031 23.0 7.6 61 103-169 6-75 (138)
21 3i8t_A Galectin-4; S-type lect 31.9 1.7E+02 0.0059 22.4 7.8 61 102-169 30-102 (164)
22 3zxf_A Galectin-7; sugar bindi 29.7 1.7E+02 0.0057 21.5 7.7 61 103-169 8-78 (138)
23 3vkl_A Galectin-8; beta-sandwi 27.8 2.6E+02 0.009 23.2 8.5 59 103-168 19-91 (291)
24 2d6m_A Galectin-9, lectin, gal 27.3 2E+02 0.0069 21.7 7.3 61 102-169 18-89 (159)
25 1x50_A Galectin-4; GAL-BIND le 25.1 2.3E+02 0.0078 21.6 7.3 62 102-169 28-97 (164)
26 1sif_A Ubiquitin; hydrophobic 24.3 53 0.0018 22.0 2.8 24 167-190 6-29 (88)
27 2zhn_A Galectin-9; beta sandwi 21.3 2.5E+02 0.0087 20.7 8.2 61 102-169 16-88 (148)
28 1v2y_A 3300001G02RIK protein; 20.9 79 0.0027 22.6 3.2 20 171-190 8-27 (105)
No 1
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=1.6e-35 Score=253.13 Aligned_cols=135 Identities=29% Similarity=0.525 Sum_probs=124.7
Q ss_pred eecCCCCc----------CCCCceeEEEE-EEeCCeeEEEEe---------------cccccccCCeeEeeecEEEEEEe
Q 039840 54 VIKPAPGK----------RSCNCRNEVYH-KQIGPGMFQQMT---------------EQVCEQCQNVKYEREGYFVTVDI 107 (198)
Q Consensus 54 ~c~~c~G~----------~~C~G~G~~~~-~~~~~g~~~~~~---------------~~~C~~C~G~g~~~~~~~l~V~I 107 (198)
.|..|+|+ +.|+|+|+++. ++++| |+|+++ +++|+.|+|.+++++.++++|+|
T Consensus 40 ~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~I 118 (248)
T 1nlt_A 40 LCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHV 118 (248)
T ss_dssp ECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTTCSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEE
T ss_pred eCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCCCCCcCEEeccCCCCcccCCCceEeeeEEEEEEE
Confidence 59999987 57999998654 47888 776665 68899999999999999999999
Q ss_pred cCCCCCCcEEEEcccCCCCCCCCCcceEEEEE------eeecCCceEEEEEEeceeccccccceeeeeecEEEEeCCCCc
Q 039840 108 EKGMQDGQEVVFCEDGEPIIDGEPGDLKASFG------LLREGNNLHATVTITLVKLSCGLWDVQAVVGFEKTIKHLDGH 181 (198)
Q Consensus 108 P~G~~~G~~I~l~G~G~~~~~~~~GDLiv~i~------F~R~G~DL~~~~~I~l~~~~~~~~~~~Al~G~~~~i~~ldG~ 181 (198)
|||+++|++|+|+|+|++.+++.+|||||+|+ |+|+|+|||++++|||. |||+|++++|+||||+
T Consensus 119 p~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~---------eAllG~~i~v~tldG~ 189 (248)
T 1nlt_A 119 EPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLL---------TAIAGGEFALEHVSGD 189 (248)
T ss_dssp CTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHH---------HHHHCBCCEEECSSSC
T ss_pred CCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHH---------HHhcCCEEEEeCCCCC
Confidence 99999999999999999988889999999998 99999999999999999 9999999999999998
Q ss_pred EEEEeeCCC--CCCCeEEC
Q 039840 182 LVDISTKGI--TKPKEVRK 198 (198)
Q Consensus 182 ~~~i~~~~~--t~pg~v~r 198 (198)
.+.|++|++ ||||+++|
T Consensus 190 ~~~i~ip~g~vt~~g~~~r 208 (248)
T 1nlt_A 190 WLKVGIVPGEVIAPGMRKV 208 (248)
T ss_dssp EEECCBCTTTTCSTTCEEE
T ss_pred EEEEEeCCCCeeCCCeEEE
Confidence 899999987 99999875
No 2
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.96 E-value=1.2e-28 Score=218.35 Aligned_cols=150 Identities=19% Similarity=0.232 Sum_probs=101.7
Q ss_pred chhhHHhhhcCCCCC-CCCCCCCCCCCeEEeeee--ecCCCCcCCCCceeEEEEEEeCCeeEEEEecccccccCCeeEee
Q 039840 22 LLVLVFDSFFGGGPT-EEDERIAKGDDVWREKNV--IKPAPGKRSCNCRNEVYHKQIGPGMFQQMTEQVCEQCQNVKYER 98 (198)
Q Consensus 22 ~f~diF~~fFGgg~~-~~~~~~~kg~Di~~~~~~--c~~c~G~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~ 98 (198)
+|+|||++|||++++ ++.+++++|+|+.++..+ -+...| ..+.+..+ ...| .+.|...++
T Consensus 116 ~f~diF~~~Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G------~~k~i~i~----------~~v~-~g~G~v~~~ 178 (329)
T 3lz8_A 116 DFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAE------QTRTISYN----------LPVY-NVFGMIESE 178 (329)
T ss_dssp ---------------------CCCCCCEEEEECCCTTGGGSC------EEEEEEEE----------EEEC-CSCC-CCEE
T ss_pred chhhhhHhhhcCcCCCCCCCCcCCCCCEEEEEecchhhhhhc------cceEEEEE----------EEee-cCCeEEEEe
Confidence 589999999986422 122346789998887644 333333 33322111 0111 123333445
Q ss_pred ecEEEEEEecCCCCCCcEEEEcccCCCCCC-CCCcceEEEEE------eeecCCceEEEEEEeceeccccccceeeeeec
Q 039840 99 EGYFVTVDIEKGMQDGQEVVFCEDGEPIID-GEPGDLKASFG------LLREGNNLHATVTITLVKLSCGLWDVQAVVGF 171 (198)
Q Consensus 99 ~~~~l~V~IP~G~~~G~~I~l~G~G~~~~~-~~~GDLiv~i~------F~R~G~DL~~~~~I~l~~~~~~~~~~~Al~G~ 171 (198)
+.+.++|+||||+++|++|+|+|+|+++++ +.+|||+|+|+ |+|+|+||+++++|+|. |||+|+
T Consensus 179 ~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~---------eAllG~ 249 (329)
T 3lz8_A 179 TPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPW---------EAALGA 249 (329)
T ss_dssp EEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHH---------HHHHCE
T ss_pred cceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHH---------HHcCCC
Confidence 577899999999999999999999999875 57999999998 99999999999999999 999999
Q ss_pred EEEEeCCCCcEEEEeeCCCCCCCeEEC
Q 039840 172 EKTIKHLDGHLVDISTKGITKPKEVRK 198 (198)
Q Consensus 172 ~~~i~~ldG~~~~i~~~~~t~pg~v~r 198 (198)
+++|+||||+ +.|++|++||||+++|
T Consensus 250 ~v~VptLdG~-v~l~ip~gt~~g~~~r 275 (329)
T 3lz8_A 250 KVTVPTLKES-ILLTVPPGSQAGQRLR 275 (329)
T ss_dssp EEEECCSSSC-EEEEECTTCCTTCEEE
T ss_pred eEEEECCCCC-EEEEECCCCCCCCEEE
Confidence 9999999998 8999999999999875
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=99.96 E-value=1.5e-28 Score=201.07 Aligned_cols=105 Identities=21% Similarity=0.411 Sum_probs=100.9
Q ss_pred cccccccCCeeEeeecEEEEEEecCCCCCCcEEEEcccCCCCCCCCCcceEEEEE------eeecCCceEEEEEEeceec
Q 039840 85 EQVCEQCQNVKYEREGYFVTVDIEKGMQDGQEVVFCEDGEPIIDGEPGDLKASFG------LLREGNNLHATVTITLVKL 158 (198)
Q Consensus 85 ~~~C~~C~G~g~~~~~~~l~V~IP~G~~~G~~I~l~G~G~~~~~~~~GDLiv~i~------F~R~G~DL~~~~~I~l~~~ 158 (198)
..+|+.|+|.+++++.++++|+||||+++|++|+|+|+|++++++.+|||+|+|+ |+|+|+||+++++|||.
T Consensus 27 ~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~-- 104 (181)
T 3agx_A 27 SHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLR-- 104 (181)
T ss_dssp EEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHH--
T ss_pred ecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEEcCHH--
Confidence 4579999999999999999999999999999999999999988888999999998 99999999999999999
Q ss_pred cccccceeeeeecEEEEeCCCCcEEEEeeCCCCCCCeEEC
Q 039840 159 SCGLWDVQAVVGFEKTIKHLDGHLVDISTKGITKPKEVRK 198 (198)
Q Consensus 159 ~~~~~~~~Al~G~~~~i~~ldG~~~~i~~~~~t~pg~v~r 198 (198)
||++|++++|+||||+.+.|++|++||||+++|
T Consensus 105 -------eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~r 137 (181)
T 3agx_A 105 -------EALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRK 137 (181)
T ss_dssp -------HHHHCEEEEEECTTSCEEEEEECSCCCTTCEEE
T ss_pred -------HHhCCCEEEeECCCCCEEEEECCCccCCCcEEE
Confidence 999999999999999889999999999999875
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=99.92 E-value=6.8e-25 Score=179.13 Aligned_cols=95 Identities=32% Similarity=0.510 Sum_probs=90.7
Q ss_pred eEeeecEEEEEEecCCCCCCcEEEEcccCCC-CCCCCCcceEEEEE------eeecCCceEEEEEEeceeccccccceee
Q 039840 95 KYEREGYFVTVDIEKGMQDGQEVVFCEDGEP-IIDGEPGDLKASFG------LLREGNNLHATVTITLVKLSCGLWDVQA 167 (198)
Q Consensus 95 g~~~~~~~l~V~IP~G~~~G~~I~l~G~G~~-~~~~~~GDLiv~i~------F~R~G~DL~~~~~I~l~~~~~~~~~~~A 167 (198)
+++++.+.++|+||||+++|++|+|+|+|++ .+++.+|||+|+|+ |+|+|+||+++++|||. ||
T Consensus 36 g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~---------eA 106 (180)
T 2q2g_A 36 KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLV---------RA 106 (180)
T ss_dssp EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHH---------HH
T ss_pred ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHH---------HH
Confidence 7888999999999999999999999999999 56678999999998 99999999999999999 99
Q ss_pred eeecEEEEeCCCCcEEEEeeCCCCCCCeEEC
Q 039840 168 VVGFEKTIKHLDGHLVDISTKGITKPKEVRK 198 (198)
Q Consensus 168 l~G~~~~i~~ldG~~~~i~~~~~t~pg~v~r 198 (198)
++|++++|+||||+.+.|++|++||||+++|
T Consensus 107 llG~~i~v~tldG~~v~i~ip~~t~~g~~~r 137 (180)
T 2q2g_A 107 LTGFTCPVTTLDNRNLQIPIKEIVNPKTRKI 137 (180)
T ss_dssp HHCEEEEEECTTCCEEEEEECSCCCTTCEEE
T ss_pred hCCCEEEeeCCCCCEEEEECCCccCCCEEEE
Confidence 9999999999999889999999999999875
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=99.90 E-value=4e-24 Score=173.12 Aligned_cols=91 Identities=21% Similarity=0.447 Sum_probs=86.3
Q ss_pred ecEEEEEEecCCCCCCcEEEEcccCCCC-CCCCCcceEEEEE------eeecCCceEEEEEEeceeccccccceeeeeec
Q 039840 99 EGYFVTVDIEKGMQDGQEVVFCEDGEPI-IDGEPGDLKASFG------LLREGNNLHATVTITLVKLSCGLWDVQAVVGF 171 (198)
Q Consensus 99 ~~~~l~V~IP~G~~~G~~I~l~G~G~~~-~~~~~GDLiv~i~------F~R~G~DL~~~~~I~l~~~~~~~~~~~Al~G~ 171 (198)
+.++++|+||||+++|++|+|+|+|+++ +++.+|||+|+|+ |+|+|+||+++++|||. ||++|+
T Consensus 34 ~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~---------eAllG~ 104 (170)
T 1c3g_A 34 EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFK---------ESLLGF 104 (170)
T ss_dssp EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHH---------HHHHCE
T ss_pred EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHH---------HHhCCC
Confidence 7789999999999999999999999965 4578999999999 99999999999999999 999999
Q ss_pred EEEEeCCCCcEEEEeeCCCCCCCeEEC
Q 039840 172 EKTIKHLDGHLVDISTKGITKPKEVRK 198 (198)
Q Consensus 172 ~~~i~~ldG~~~~i~~~~~t~pg~v~r 198 (198)
+++|+||||+.+.|++|++||||+++|
T Consensus 105 ~~~v~tldG~~~~i~i~~~t~~g~~~r 131 (170)
T 1c3g_A 105 SKTIQTIDGRTLPLSRVQPVQPSQTST 131 (170)
T ss_dssp EEEEECSSSCEEEEEESSCCCTTCEEE
T ss_pred eEEeeCCCCCEEEEECCCccCCCcEEE
Confidence 999999999889999999999999875
No 6
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.35 E-value=5.5e-13 Score=102.23 Aligned_cols=50 Identities=22% Similarity=0.363 Sum_probs=48.0
Q ss_pred eeecCCceEEEEEEeceeccccccceeeeeecEEEEeCCCCcEEEEeeCCC--CCCCeEEC
Q 039840 140 LLREGNNLHATVTITLVKLSCGLWDVQAVVGFEKTIKHLDGHLVDISTKGI--TKPKEVRK 198 (198)
Q Consensus 140 F~R~G~DL~~~~~I~l~~~~~~~~~~~Al~G~~~~i~~ldG~~~~i~~~~~--t~pg~v~r 198 (198)
|+|+|+||+++++|||. +|++|++++|+||||+.+.|++|++ |+||+++|
T Consensus 2 F~R~G~DL~~~~~Isl~---------eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~r 53 (121)
T 1xao_A 2 FKRDGDDLVYEAEIDLL---------TAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKV 53 (121)
T ss_dssp CEEETTEEEEEEEEEHH---------HHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEE
T ss_pred ceEECCeEEEEEEcCHH---------HHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEE
Confidence 89999999999999999 9999999999999998899999988 99999875
No 7
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.30 E-value=1.3e-12 Score=98.65 Aligned_cols=49 Identities=14% Similarity=0.181 Sum_probs=47.3
Q ss_pred eeecCCceEEEEEEeceeccccccceeeeeecEEEEeCCCCcEEEEeeCCCCCCCeEEC
Q 039840 140 LLREGNNLHATVTITLVKLSCGLWDVQAVVGFEKTIKHLDGHLVDISTKGITKPKEVRK 198 (198)
Q Consensus 140 F~R~G~DL~~~~~I~l~~~~~~~~~~~Al~G~~~~i~~ldG~~~~i~~~~~t~pg~v~r 198 (198)
|+|+|+||+++++|||. ||++|++++|+||||. +.|++|++|+||+++|
T Consensus 7 F~R~G~DL~~~~~Isl~---------eAl~G~~i~v~tldG~-~~v~ip~g~~~G~~~r 55 (109)
T 3i38_A 7 FDIVGHNLEIVLPLAPW---------EAALGAKVTVPTLKES-ILLTVPPGSQAGQRLR 55 (109)
T ss_dssp CEEETTEEEEEEEECHH---------HHHHCEEEEECCSSSC-EEEEECTTCCTTCEEE
T ss_pred eEEECCEEEEEEEcCHH---------HHhCCCEEEEEcCCCC-EEEeeCCCcCcCeEEE
Confidence 99999999999999999 9999999999999995 9999999999999875
No 8
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.26 E-value=1.6e-07 Score=69.51 Aligned_cols=59 Identities=14% Similarity=0.165 Sum_probs=43.1
Q ss_pred CeEEeee-eecCCCCc-----------CCCCceeEEEEEEeCCeeEEEEe-----------cccccccCCeeEeeecEEE
Q 039840 47 DVWREKN-VIKPAPGK-----------RSCNCRNEVYHKQIGPGMFQQMT-----------EQVCEQCQNVKYEREGYFV 103 (198)
Q Consensus 47 Di~~~~~-~c~~c~G~-----------~~C~G~G~~~~~~~~~g~~~~~~-----------~~~C~~C~G~g~~~~~~~l 103 (198)
+|.+++. .|..|+|+ +.|+|+|++...+ |+ |.++.+ +++|+.|+|.|++++.+.+
T Consensus 22 ~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~-G~-~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~~~k~l 99 (104)
T 2ctt_A 22 EFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT-GP-FVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQKKRS 99 (104)
T ss_dssp TCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE-TT-EEEEEECSSSSSSSEECSSCCSSSSSCSEECCCCSS
T ss_pred EEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe-CC-EEEEEECCcCCCcceECCCcCCCCCCeeEEEEEEEE
Confidence 3555554 69999986 6799999876555 55 322222 5789999999999998888
Q ss_pred EEEe
Q 039840 104 TVDI 107 (198)
Q Consensus 104 ~V~I 107 (198)
+|++
T Consensus 100 ~V~~ 103 (104)
T 2ctt_A 100 GPSS 103 (104)
T ss_dssp CCSC
T ss_pred EEEc
Confidence 8764
No 9
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=97.81 E-value=2.8e-05 Score=58.15 Aligned_cols=37 Identities=24% Similarity=0.259 Sum_probs=33.5
Q ss_pred EEEEEecCCCCCCcEEEEcccCCCCCCCCCcceEEEEE
Q 039840 102 FVTVDIEKGMQDGQEVVFCEDGEPIIDGEPGDLKASFG 139 (198)
Q Consensus 102 ~l~V~IP~G~~~G~~I~l~G~G~~~~~~~~GDLiv~i~ 139 (198)
.++|+||+|+++|++++++|+|.+.. +.+|||||+++
T Consensus 39 ~~~v~ip~g~~~G~~~rl~G~G~p~~-~~~GDL~v~~~ 75 (109)
T 3i38_A 39 SILLTVPPGSQAGQRLRIKGKGLVSK-THTGDLFAVIK 75 (109)
T ss_dssp CEEEEECTTCCTTCEEEETTCSCBCS-SCBCCEEEEEE
T ss_pred CEEEeeCCCcCcCeEEEECCccCCCC-CCCcCEEEEEE
Confidence 47899999999999999999999874 37899999998
No 10
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.69 E-value=2.8e-05 Score=54.15 Aligned_cols=48 Identities=17% Similarity=0.348 Sum_probs=30.8
Q ss_pred eEEeee-eecCCCCc-----------CCCCceeEEEEEEeCCeeEEEEe------------cccccccCCeeEee
Q 039840 48 VWREKN-VIKPAPGK-----------RSCNCRNEVYHKQIGPGMFQQMT------------EQVCEQCQNVKYER 98 (198)
Q Consensus 48 i~~~~~-~c~~c~G~-----------~~C~G~G~~~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~ 98 (198)
|.+++. .|..|+|+ +.|+|+|+++..+ |+|+..+ +++|+.|+|.++++
T Consensus 6 i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~~ 77 (79)
T 1exk_A 6 IRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ---GFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVE 77 (79)
T ss_dssp CCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE---TTEEEEEECTTTTTSSEECSSBCGGGTTSSEEE
T ss_pred EEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc---CCCEEeeECcCCCCccEECCCcCCCCCCeEEEe
Confidence 444443 58999886 6799999877655 4554322 45666666666654
No 11
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=97.60 E-value=8.3e-05 Score=56.42 Aligned_cols=40 Identities=30% Similarity=0.418 Sum_probs=32.3
Q ss_pred cEEEEEEecCC--CCCCcEEEEcccCCCCCCC-CCcceEEEEE
Q 039840 100 GYFVTVDIEKG--MQDGQEVVFCEDGEPIIDG-EPGDLKASFG 139 (198)
Q Consensus 100 ~~~l~V~IP~G--~~~G~~I~l~G~G~~~~~~-~~GDLiv~i~ 139 (198)
.+.++|+||+| +++|++++++|+|.+..++ .+|||||.++
T Consensus 33 G~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~ 75 (121)
T 1xao_A 33 GDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFT 75 (121)
T ss_dssp SCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEE
T ss_pred CCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEE
Confidence 34688999999 9999999999999987654 6899999998
No 12
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=96.98 E-value=0.0011 Score=53.35 Aligned_cols=40 Identities=23% Similarity=0.340 Sum_probs=34.9
Q ss_pred cEEEEEEecCCCCCCcEEEEcccCCCCCC--CCCcceEEEEE
Q 039840 100 GYFVTVDIEKGMQDGQEVVFCEDGEPIID--GEPGDLKASFG 139 (198)
Q Consensus 100 ~~~l~V~IP~G~~~G~~I~l~G~G~~~~~--~~~GDLiv~i~ 139 (198)
.+.++|+||+|+++|++++++|+|.+..+ +.+|||||.++
T Consensus 119 G~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~ 160 (181)
T 3agx_A 119 GRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFE 160 (181)
T ss_dssp SCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEE
T ss_pred CCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence 34789999999999999999999998754 35799999988
No 13
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=96.93 E-value=0.0013 Score=52.82 Aligned_cols=39 Identities=23% Similarity=0.406 Sum_probs=34.3
Q ss_pred EEEEEEecCCCCCCcEEEEcccCCCCCC--CCCcceEEEEE
Q 039840 101 YFVTVDIEKGMQDGQEVVFCEDGEPIID--GEPGDLKASFG 139 (198)
Q Consensus 101 ~~l~V~IP~G~~~G~~I~l~G~G~~~~~--~~~GDLiv~i~ 139 (198)
+.++|++|+|+++|++++++|+|.+..+ +.+|||||.++
T Consensus 120 ~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~ 160 (180)
T 2q2g_A 120 RNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFD 160 (180)
T ss_dssp CEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEE
T ss_pred CEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence 3688999999999999999999998654 35799999988
No 14
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=96.91 E-value=0.00097 Score=53.13 Aligned_cols=40 Identities=18% Similarity=0.299 Sum_probs=34.7
Q ss_pred cEEEEEEecCCCCCCcEEEEcccCCCCCC--CCCcceEEEEE
Q 039840 100 GYFVTVDIEKGMQDGQEVVFCEDGEPIID--GEPGDLKASFG 139 (198)
Q Consensus 100 ~~~l~V~IP~G~~~G~~I~l~G~G~~~~~--~~~GDLiv~i~ 139 (198)
.+.++|+||+|+++|++++++|+|.+..+ +.+|||||.++
T Consensus 113 G~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~ 154 (170)
T 1c3g_A 113 GRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYK 154 (170)
T ss_dssp SCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEEC
T ss_pred CCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEE
Confidence 34688999999999999999999998654 35799999987
No 15
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=96.65 E-value=0.0016 Score=54.85 Aligned_cols=40 Identities=30% Similarity=0.418 Sum_probs=35.1
Q ss_pred cEEEEEEecCC--CCCCcEEEEcccCCCCCCC-CCcceEEEEE
Q 039840 100 GYFVTVDIEKG--MQDGQEVVFCEDGEPIIDG-EPGDLKASFG 139 (198)
Q Consensus 100 ~~~l~V~IP~G--~~~G~~I~l~G~G~~~~~~-~~GDLiv~i~ 139 (198)
.+.++|+|||| +++|++++++|+|.+..+. .+|||||.|+
T Consensus 188 G~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~ 230 (248)
T 1nlt_A 188 GDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFT 230 (248)
T ss_dssp SCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEE
T ss_pred CCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEE
Confidence 45789999999 9999999999999986543 5799999988
No 16
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=96.59 E-value=0.0025 Score=56.00 Aligned_cols=36 Identities=25% Similarity=0.292 Sum_probs=32.7
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCCCCCCcceEEEEE
Q 039840 103 VTVDIEKGMQDGQEVVFCEDGEPIIDGEPGDLKASFG 139 (198)
Q Consensus 103 l~V~IP~G~~~G~~I~l~G~G~~~~~~~~GDLiv~i~ 139 (198)
++|+||+|+++|++++++|+|.+.. ..+|||+|+++
T Consensus 260 v~l~ip~gt~~g~~~rl~G~GmP~~-~~rGDL~v~~~ 295 (329)
T 3lz8_A 260 ILLTVPPGSQAGQRLRIKGKGLVSK-THTGDLFAVIK 295 (329)
T ss_dssp EEEEECTTCCTTCEEEETTCSCBCS-SCBCCEEEEEE
T ss_pred EEEEECCCCCCCCEEEEcCCCCCCC-CCCCCEEEEEE
Confidence 6899999999999999999999865 56899999988
No 17
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=92.97 E-value=0.029 Score=36.63 Aligned_cols=15 Identities=13% Similarity=0.319 Sum_probs=12.3
Q ss_pred ccccccCCeeEeeec
Q 039840 86 QVCEQCQNVKYEREG 100 (198)
Q Consensus 86 ~~C~~C~G~g~~~~~ 100 (198)
++|+.|+|.|++++.
T Consensus 24 ~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 24 EPCPKCLGKGVILTA 38 (53)
T ss_dssp EECTTTTTSSEEECH
T ss_pred CcCCCCCCcEEEEEE
Confidence 579999999988664
No 18
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=86.45 E-value=0.22 Score=32.31 Aligned_cols=14 Identities=14% Similarity=0.292 Sum_probs=10.5
Q ss_pred ccccccCCeeEeee
Q 039840 86 QVCEQCQNVKYERE 99 (198)
Q Consensus 86 ~~C~~C~G~g~~~~ 99 (198)
.+|+.|+|.|.+..
T Consensus 24 ~~C~~C~G~G~v~~ 37 (53)
T 2bx9_A 24 TPCPACSGKGVILT 37 (53)
T ss_dssp EECTTTTTSSEEEC
T ss_pred CCCccCCCCccEEE
Confidence 46888888887754
No 19
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=73.58 E-value=1.9 Score=27.81 Aligned_cols=21 Identities=10% Similarity=0.216 Sum_probs=16.8
Q ss_pred eeecCCCCc--------CCCCceeEEEEE
Q 039840 53 NVIKPAPGK--------RSCNCRNEVYHK 73 (198)
Q Consensus 53 ~~c~~c~G~--------~~C~G~G~~~~~ 73 (198)
..|+.|.|+ +.|+|+|.+...
T Consensus 10 ~~C~~C~GsG~~i~~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 10 TTCPNCNGSGREEPEPCPKCLGKGVILTA 38 (53)
T ss_dssp EECTTTTTSCEETTEECTTTTTSSEEECH
T ss_pred ccCcCCcccccCCCCcCCCCCCcEEEEEE
Confidence 369999987 789999987654
No 20
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} SCOP: b.29.1.3 PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A*
Probab=45.16 E-value=91 Score=23.04 Aligned_cols=61 Identities=8% Similarity=0.119 Sum_probs=37.9
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCCCC------CCcceEEEEE--eeecC-CceEEEEEEeceeccccccceeeee
Q 039840 103 VTVDIEKGMQDGQEVVFCEDGEPIIDG------EPGDLKASFG--LLREG-NNLHATVTITLVKLSCGLWDVQAVV 169 (198)
Q Consensus 103 l~V~IP~G~~~G~~I~l~G~G~~~~~~------~~GDLiv~i~--F~R~G-~DL~~~~~I~l~~~~~~~~~~~Al~ 169 (198)
.+-.||.|+.+|+.|++.|.-...++. ...|+.++++ |...+ +-+..+.. .-|-|.-|...
T Consensus 6 ~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~dialHfnpRf~~~~~~~iV~Ns~------~~g~Wg~Eer~ 75 (138)
T 3zsj_A 6 YNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTK------LDNNWGREERQ 75 (138)
T ss_dssp EEEECTTCCCTTEEEEEEEEECTTCCBEEEEEEETTEEEEEEEEEEEETTEEEEEEEEE------ETTEECCCEEE
T ss_pred EEeecCCCCCCCCEEEEEEEECCCCCEEEEEeccCCCEEEEEEeEcCCCCCCEEEEEcc------cCCEeCCCeEc
Confidence 456899999999999999976543321 1257777777 66543 22333322 24667766543
No 21
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A
Probab=31.93 E-value=1.7e+02 Score=22.36 Aligned_cols=61 Identities=15% Similarity=0.176 Sum_probs=38.0
Q ss_pred EEEEEecCCCCCCcEEEEcccCCCCCC--------C--CCcceEEEEE--eeecCCceEEEEEEeceeccccccceeeee
Q 039840 102 FVTVDIEKGMQDGQEVVFCEDGEPIID--------G--EPGDLKASFG--LLREGNNLHATVTITLVKLSCGLWDVQAVV 169 (198)
Q Consensus 102 ~l~V~IP~G~~~G~~I~l~G~G~~~~~--------~--~~GDLiv~i~--F~R~G~DL~~~~~I~l~~~~~~~~~~~Al~ 169 (198)
...-.||.|+..|+.|++.|.-...++ + ...|+.+.++ |.. ++-+..+..+ -|.|.-|...
T Consensus 30 Py~~~ipggL~~G~~I~I~G~v~~~a~rF~INl~~g~~~~~dIalHfnpRF~~-~~~VV~NS~~------~g~WG~EEr~ 102 (164)
T 3i8t_A 30 PYKRPIPGGLSVGMSVYIQGMAKENMRRFHVNFAVGQDDGADVAFHFNPRFDG-WDKVVFNTMQ------SGQWGKEEKK 102 (164)
T ss_dssp SEEEECTTCCCTTCEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEECSS-SCEEEEEEEE------TTEECCCEEE
T ss_pred CeeeeCCCCCCCCCEEEEEEEECCCCCEEEEEeccCCCCCCCEEEEEEeeeCC-CCEEEEEccc------CCEeCcceec
Confidence 356788999999999999996543321 1 1247777777 543 2444444332 3567766544
No 22
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=29.74 E-value=1.7e+02 Score=21.51 Aligned_cols=61 Identities=13% Similarity=0.157 Sum_probs=37.0
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCCC--------C--CCcceEEEEEeeecCCceEEEEEEeceeccccccceeeee
Q 039840 103 VTVDIEKGMQDGQEVVFCEDGEPIID--------G--EPGDLKASFGLLREGNNLHATVTITLVKLSCGLWDVQAVV 169 (198)
Q Consensus 103 l~V~IP~G~~~G~~I~l~G~G~~~~~--------~--~~GDLiv~i~F~R~G~DL~~~~~I~l~~~~~~~~~~~Al~ 169 (198)
..-.||.|+..|+.|++.|.-...++ + ...|+.++++-+-+.+-+..+... -|-|.-|...
T Consensus 8 ~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~~~vV~Ns~~------~g~Wg~Eer~ 78 (138)
T 3zxf_A 8 HKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKE------QGSWGREERG 78 (138)
T ss_dssp EEEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTTTEEEEEEEE------TTEECCCEEC
T ss_pred EEeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCCCEEEEECcc------CCEeCcCEEe
Confidence 56689999999999999996543321 0 135777777722223334444322 3667766544
No 23
>3vkl_A Galectin-8; beta-sandwich, carbohydrate binding, oligosaccharide, sugar protein; HET: GAL BGC; 2.55A {Homo sapiens} PDB: 3naj_A* 3vkm_A* 4fqz_A* 3ojb_A
Probab=27.78 E-value=2.6e+02 Score=23.22 Aligned_cols=59 Identities=19% Similarity=0.291 Sum_probs=35.5
Q ss_pred EEEEecCCCCCCcEEEEcccCCCCCC--------C----CCcceEEEEE--eeecCCceEEEEEEeceeccccccceeee
Q 039840 103 VTVDIEKGMQDGQEVVFCEDGEPIID--------G----EPGDLKASFG--LLREGNNLHATVTITLVKLSCGLWDVQAV 168 (198)
Q Consensus 103 l~V~IP~G~~~G~~I~l~G~G~~~~~--------~----~~GDLiv~i~--F~R~G~DL~~~~~I~l~~~~~~~~~~~Al 168 (198)
..-.||-|+..|+.|++.|.=....+ + ...|+.++++ |.+++ -+.++..+ -|.|.-|.-
T Consensus 19 ~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~~~dialHfnpRf~~~~-~IV~Ns~~------~g~Wg~EEr 91 (291)
T 3vkl_A 19 FVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAG-CIVCNTLI------NEKWGREEI 91 (291)
T ss_dssp EEEECSSCCCTTCEEEEEEECCTTCCBEEEEEESSCCBTTBCCEEEEEEEECSSSC-EEEEEEEE------TTEECCCEE
T ss_pred EeeECCCCCccCcEEEEEEEECCCCCEEEEEEEeCCCCCCCCCEEEEEEeEcCCCC-EEEEeCcc------CCEecCCcc
Confidence 45689999999999999996543221 0 1247777776 54322 23333322 456776654
No 24
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X*
Probab=27.29 E-value=2e+02 Score=21.69 Aligned_cols=61 Identities=20% Similarity=0.314 Sum_probs=38.4
Q ss_pred EEEEEecCCCCCCcEEEEcccCCCCCC-------CC--CcceEEEEE--eeecCCceEEEEEEeceeccccccceeeee
Q 039840 102 FVTVDIEKGMQDGQEVVFCEDGEPIID-------GE--PGDLKASFG--LLREGNNLHATVTITLVKLSCGLWDVQAVV 169 (198)
Q Consensus 102 ~l~V~IP~G~~~G~~I~l~G~G~~~~~-------~~--~GDLiv~i~--F~R~G~DL~~~~~I~l~~~~~~~~~~~Al~ 169 (198)
.....||.|+..|+.|++.|.-...++ .. ..|+.++++ |. +.+-+..+..+ -|-|.-|.-.
T Consensus 18 Pf~~~i~~gl~~G~~i~I~G~v~~~~~rF~Inl~~g~~~~dialHfnpRf~-~~~~IV~Ns~~------~g~Wg~EEr~ 89 (159)
T 2d6m_A 18 PFTGPIQGGLQEGLQVTLQGTTKSFAQRFVVNFQNSFNGNDIAFHFNPRFE-EGGYVVCNTKQ------NGQWGPEERK 89 (159)
T ss_dssp SEEEECTTCCCTTCEEEEEEEECSSCCBEEEEEESSTTCSCEEEEEEEECC-TTCEEEEEEEE------TTEECCCEEE
T ss_pred CEEEECCCCCccCCEEEEEEEECCCCCEEEEEEecCCCCCCEEEEEEEEEC-CCCEEEEEccc------CCEeCcceEc
Confidence 356789999999999999996544332 01 247877777 44 13344444332 3678777654
No 25
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.09 E-value=2.3e+02 Score=21.56 Aligned_cols=62 Identities=10% Similarity=0.135 Sum_probs=37.8
Q ss_pred EEEEEecCCCCCCcEEEEcccCCCCCCC-------CC-cceEEEEEeeecCCceEEEEEEeceeccccccceeeee
Q 039840 102 FVTVDIEKGMQDGQEVVFCEDGEPIIDG-------EP-GDLKASFGLLREGNNLHATVTITLVKLSCGLWDVQAVV 169 (198)
Q Consensus 102 ~l~V~IP~G~~~G~~I~l~G~G~~~~~~-------~~-GDLiv~i~F~R~G~DL~~~~~I~l~~~~~~~~~~~Al~ 169 (198)
.....||.|+..|+.|++.|.-...++. .. +|+.++++.+-+.+-+..+..+ -|.|.-|...
T Consensus 28 Pf~~~ip~gL~~G~~i~I~G~v~~~~~rF~INl~~g~~~dIalHfnpRf~~~~IV~Ns~~------~g~Wg~EEr~ 97 (164)
T 1x50_A 28 PYFGRLQGGLTARRTIIIKGYVPPTGKSFAINFKVGSSGDIALHINPRMGNGTVVRNSLL------NGSWGSEEKK 97 (164)
T ss_dssp SEEEECSSCSCTTEEEEEEEECCTTCCCEEEEEECSSSCCCSEEEECCTTTCCCEEECEE------TTEECCCEEC
T ss_pred CEEeeCCCCCccCCEEEEEEEECCCCCEEEEEEecCCCCCEEEEEEEEcCCCEEEEEccc------CCEeccceee
Confidence 4678999999999999999976543321 12 4777777722223334444322 2567666554
No 26
>1sif_A Ubiquitin; hydrophobic mutants, folding, stability, structural protein; 2.18A {Homo sapiens} SCOP: d.15.1.1
Probab=24.30 E-value=53 Score=22.02 Aligned_cols=24 Identities=21% Similarity=0.320 Sum_probs=17.6
Q ss_pred eeeecEEEEeCCCCcEEEEeeCCC
Q 039840 167 AVVGFEKTIKHLDGHLVDISTKGI 190 (198)
Q Consensus 167 Al~G~~~~i~~ldG~~~~i~~~~~ 190 (198)
.|-|..+.|++++|+.+.+.+++-
T Consensus 6 ~~~~~~i~v~~~~G~~~~l~v~~~ 29 (88)
T 1sif_A 6 HLQGLQLFIKTLTGKTFTVEMEPS 29 (88)
T ss_dssp ----CEEEEEETTSCEEEEECCTT
T ss_pred cccceEEEEEeCCCCEEEEEECCC
Confidence 467899999999999888888753
No 27
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A*
Probab=21.28 E-value=2.5e+02 Score=20.72 Aligned_cols=61 Identities=18% Similarity=0.271 Sum_probs=37.8
Q ss_pred EEEEEecCCCCCCcEEEEcccC-CCCC-----C---CC-CcceEEEEE--eeecCCceEEEEEEeceeccccccceeeee
Q 039840 102 FVTVDIEKGMQDGQEVVFCEDG-EPII-----D---GE-PGDLKASFG--LLREGNNLHATVTITLVKLSCGLWDVQAVV 169 (198)
Q Consensus 102 ~l~V~IP~G~~~G~~I~l~G~G-~~~~-----~---~~-~GDLiv~i~--F~R~G~DL~~~~~I~l~~~~~~~~~~~Al~ 169 (198)
.....||.|+..|+.|++.|.- .... + +. ..|+.++++ |. +.+-+..+..+ -|.|.-|.-.
T Consensus 16 P~~~~i~~gl~~G~~i~I~G~~~~~~~~rF~Inl~~g~~~~dialHfnpRf~-~~~~IV~Ns~~------~g~Wg~EEr~ 88 (148)
T 2zhn_A 16 PFSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFE-DGGYVVCNTRQ------NGSWGPEERK 88 (148)
T ss_dssp SEEEECTTCCCTTCEEEEEEEECSSSCSBEEEEEESSSSSSCEEEEEEEECS-TTCEEEEEEEE------TTEECCCEEE
T ss_pred CEEEECCCCCccCCEEEEEEEECCCCCCEEEEEEeeCCCCCCEEEEEEEEEC-CCCEEEEECcc------CCEeccceEe
Confidence 3566799999999999999943 2222 1 11 257877777 54 24445554432 3667777653
No 28
>1v2y_A 3300001G02RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=20.91 E-value=79 Score=22.61 Aligned_cols=20 Identities=10% Similarity=0.240 Sum_probs=17.2
Q ss_pred cEEEEeCCCCcEEEEeeCCC
Q 039840 171 FEKTIKHLDGHLVDISTKGI 190 (198)
Q Consensus 171 ~~~~i~~ldG~~~~i~~~~~ 190 (198)
..++|++++|..+.|.+++.
T Consensus 8 M~I~Vk~l~g~~~~v~V~~~ 27 (105)
T 1v2y_A 8 MTVRVCKMDGEVMPVVVVQN 27 (105)
T ss_dssp EEEEEECSSSCEEEEEECTT
T ss_pred EEEEEEecCCCEEEEEECCC
Confidence 67899999999999998764
Done!