BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039842
(284 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SMN1|GCAL2_ARATH Gamma carbonic anhydrase-like 2, mitochondrial OS=Arabidopsis
thaliana GN=GAMMACAL2 PE=1 SV=1
Length = 256
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/282 (69%), Positives = 225/282 (79%), Gaps = 29/282 (10%)
Query: 3 ALARITRRALTTQLSHGHVIRRAFSTSAAATATATATTTKADAKSITPSADRVKWDYRGQ 62
+LARI++R++T+ +S ++IRR F+ A A AT K+ +TPS DRVKWDYRGQ
Sbjct: 4 SLARISKRSITSAVSS-NLIRRYFAAEAVAVATTETPKPKSQ---VTPSPDRVKWDYRGQ 59
Query: 63 RQIIPLGQWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQE 122
RQIIPLGQW+PKVAVDAYVAPNVVLAGQVTV DG+SVW G+VLRGDLNKITVGFCSNVQE
Sbjct: 60 RQIIPLGQWLPKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQE 119
Query: 123 RCVLHAAWNSPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSC 182
RCV+HAAW+SP LPA+T I+R+VT+GAY LRSC
Sbjct: 120 RCVVHAAWSSP-------------------------TGLPAQTLIDRYVTVGAYSLLRSC 154
Query: 183 TIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEET 242
TIEPECIIGQHSILMEGS+VET +ILEAGSVLPPGRRIP+GELW GNPARF+RTLT+EET
Sbjct: 155 TIEPECIIGQHSILMEGSLVETRSILEAGSVLPPGRRIPSGELWGGNPARFIRTLTNEET 214
Query: 243 LEIPKLAVAINDLSKSHFSEFLPYSTVYLEVEKFKKSLGITI 284
LEIPKLAVAIN LS +FSEFLPYST+YLEVEKFKKSLGI I
Sbjct: 215 LEIPKLAVAINHLSGDYFSEFLPYSTIYLEVEKFKKSLGIAI 256
>sp|Q9FMV1|GCAL1_ARATH Gamma carbonic anhydrase-like 1, mitochondrial OS=Arabidopsis
thaliana GN=GAMMACAL1 PE=1 SV=1
Length = 252
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/282 (68%), Positives = 219/282 (77%), Gaps = 33/282 (11%)
Query: 3 ALARITRRALTTQLSHGHVIRRAFSTSAAATATATATTTKADAKSITPSADRVKWDYRGQ 62
++AR++RR +T+ L IRR F AA A A T +++PS DRVKWDYRGQ
Sbjct: 4 SIARLSRRGVTSNL-----IRRCF---AAEAALARKTELPKPQFTVSPSTDRVKWDYRGQ 55
Query: 63 RQIIPLGQWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQE 122
RQIIPLGQW+PKVAVDAYVAPNVVLAGQVTV DG+SVW G+VLRGDLNKITVGFCSNVQE
Sbjct: 56 RQIIPLGQWLPKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQE 115
Query: 123 RCVLHAAWNSPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSC 182
RCV+HAAW+SP LPA T I+R+VT+GAY LRSC
Sbjct: 116 RCVVHAAWSSP-------------------------TGLPAATIIDRYVTVGAYSLLRSC 150
Query: 183 TIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEET 242
TIEPECIIGQHSILMEGS+VET +ILEAGSV+PPGRRIP+GELW GNPARF+RTLT+EET
Sbjct: 151 TIEPECIIGQHSILMEGSLVETRSILEAGSVVPPGRRIPSGELWGGNPARFIRTLTNEET 210
Query: 243 LEIPKLAVAINDLSKSHFSEFLPYSTVYLEVEKFKKSLGITI 284
LEIPKLAVAIN LS +FSEFLPYSTVYLEVEKFKKSLGI +
Sbjct: 211 LEIPKLAVAINHLSGDYFSEFLPYSTVYLEVEKFKKSLGIAV 252
>sp|Q94AU7|GCA3_ARATH Gamma carbonic anhydrase 3, mitochondrial OS=Arabidopsis thaliana
GN=GAMMACA3 PE=1 SV=1
Length = 258
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 117/219 (53%), Gaps = 29/219 (13%)
Query: 62 QRQIIPLGQWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQ 121
R ++ + P V A+VAPN L+G V V G+S+W G VLRGD N I+VG +N+Q
Sbjct: 42 HRTLMNVFDKTPNVDKGAFVAPNASLSGDVHVGRGSSIWYGCVLRGDANSISVGAGTNIQ 101
Query: 122 ERCVLHAAWNSPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRS 181
+ ++H A +L LP T I VTIG L
Sbjct: 102 DNALVHVA-----------------------KTNLSGKVLP--TVIGDNVTIGHSAVLHG 136
Query: 182 CTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
CT+E E IG + +++G+ VE HA++ +G+++ RIP+GE+W GNPA+F+R +T EE
Sbjct: 137 CTVEDEAYIGTSATVLDGAHVEKHAMVASGALVRQNTRIPSGEVWGGNPAKFLRKVTEEE 196
Query: 242 TLEIPKLAVAINDLSKSHFSEFLPYSTVYLEVEKFKKSL 280
+ AV ++L+++H +E + L+ +FKK L
Sbjct: 197 RVFFSSSAVEYSNLAQAHATE----NAKNLDEAEFKKLL 231
>sp|Q9C6B3|GCA2_ARATH Gamma carbonic anhydrase 2, mitochondrial OS=Arabidopsis thaliana
GN=GAMMACA2 PE=1 SV=1
Length = 278
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 120/229 (52%), Gaps = 26/229 (11%)
Query: 47 SITPSADRVKWDYRGQRQIIPLGQWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLR 106
S+ + R++ R ++ + P V D +VAP+ + G V + G+S+W G VLR
Sbjct: 27 SLLQGSHRIEEHLSRHRTLMNVFDKSPLVDKDVFVAPSASVIGDVQIGKGSSIWYGCVLR 86
Query: 107 GDLNKITVGFCSNVQERCVLHAAWNSPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETS 166
GD+N I+VG +N+Q+ ++H A ++ LP T
Sbjct: 87 GDVNNISVGSGTNIQDNTLVHVA-----------------------KTNISGKVLP--TL 121
Query: 167 IERFVTIGAYCSLRSCTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELW 226
I VT+G + CT+E + +G + L++G +VE HA++ AGS++ RIP+GE+W
Sbjct: 122 IGDNVTVGHSAVIHGCTVEDDAFVGMGATLLDGVVVEKHAMVAAGSLVKQNTRIPSGEVW 181
Query: 227 AGNPARFVRTLTHEETLEIPKLAVAINDLSKSHFSEFLPYSTVYLEVEK 275
GNPA+F+R LT EE + I + A +L++ H SE S +EVE+
Sbjct: 182 GGNPAKFMRKLTDEEIVYISQSAKNYINLAQIHASEN-SKSFEQIEVER 229
>sp|Q9FWR5|GCA1_ARATH Gamma carbonic anhydrase 1, mitochondrial OS=Arabidopsis thaliana
GN=GAMMACA1 PE=1 SV=1
Length = 275
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 118/219 (53%), Gaps = 29/219 (13%)
Query: 62 QRQIIPLGQWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQ 121
R ++ + P V +A+VAP+ + G V + G+S+W G VLRGD+N ++VG +N+Q
Sbjct: 42 HRTLMNVFDKAPIVDKEAFVAPSASVIGDVHIGRGSSIWYGCVLRGDVNTVSVGSGTNIQ 101
Query: 122 ERCVLHAAWNSPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRS 181
+ ++H A +SN ++ T I VTIG L
Sbjct: 102 DNSLVHVA----------------------KSN---LSGKVHPTIIGDNVTIGHSAVLHG 136
Query: 182 CTIEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
CT+E E IG + L++G +VE H ++ AG+++ RIP+GE+W GNPARF+R LT EE
Sbjct: 137 CTVEDETFIGMGATLLDGVVVEKHGMVAAGALVRQNTRIPSGEVWGGNPARFLRKLTDEE 196
Query: 242 TLEIPKLAVAINDLSKSHFSEFLPYSTVYLEVEKFKKSL 280
I + A ++L+++H +E + L V +F+K L
Sbjct: 197 IAFISQSATNYSNLAQAHAAE----NAKPLNVIEFEKVL 231
>sp|Q54JC2|Y2881_DICDI Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum
GN=DDB_G0288155 PE=1 SV=1
Length = 246
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 26/196 (13%)
Query: 64 QIIPLGQWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQER 123
++ G P V +++APN + G V + +S+W +VLRGD+N I +G + V +R
Sbjct: 43 RLTAFGDNAPIVGQKSFIAPNASIIGDVVIGKESSIWYNAVLRGDVNSIHIGDKTVVSDR 102
Query: 124 CVLHAAWNSPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCT 183
V+H + N P P T I V IG + + T
Sbjct: 103 TVVHCSSNGPLG--------------------------PKPTQIGDKVYIGPGSIVHAAT 136
Query: 184 IEPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEETL 243
I E IG S L +GS+VE + LEAGS+L G+ I +GE W G+PA+F+R +T ++
Sbjct: 137 ILGESFIGTGSTLCDGSVVEKNGFLEAGSLLTAGKTIKSGEYWGGSPAKFIRQVTKDDES 196
Query: 244 EIPKLAVAINDLSKSH 259
++ K+ +LS+ H
Sbjct: 197 QLEKIIEQNINLSEQH 212
>sp|P0A9X0|YRDA_SHIFL Protein YrdA OS=Shigella flexneri GN=yrdA PE=3 SV=1
Length = 184
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 24/175 (13%)
Query: 67 PLGQWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVL 126
P P++ + + V+ G V + D +WP V+RGD++ + +G +N+Q+ +L
Sbjct: 7 PYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSML 66
Query: 127 HAAWNSPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEP 186
H S Y P N L +I VT+G L CTI
Sbjct: 67 HVTHKSSYN---------------PDGNPL---------TIGEDVTVGHKVMLHGCTIGN 102
Query: 187 ECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
++G SIL++G++VE ++ AGS++P +R+ +G L+ G+P + +R L+ EE
Sbjct: 103 RVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEE 157
>sp|P0A9W9|YRDA_ECOLI Protein YrdA OS=Escherichia coli (strain K12) GN=yrdA PE=1 SV=1
Length = 184
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 24/175 (13%)
Query: 67 PLGQWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVL 126
P P++ + + V+ G V + D +WP V+RGD++ + +G +N+Q+ +L
Sbjct: 7 PYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSML 66
Query: 127 HAAWNSPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEP 186
H S Y P N L +I VT+G L CTI
Sbjct: 67 HVTHKSSYN---------------PDGNPL---------TIGEDVTVGHKVMLHGCTIGN 102
Query: 187 ECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
++G SIL++G++VE ++ AGS++P +R+ +G L+ G+P + +R L+ EE
Sbjct: 103 RVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEE 157
>sp|O34696|YTOA_BACSU Uncharacterized transferase YtoA OS=Bacillus subtilis (strain 168)
GN=ytoA PE=3 SV=1
Length = 171
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 33/200 (16%)
Query: 65 IIPLGQWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERC 124
I P + P + A++A N + G V + + +S+W V+RGD+ +G N+Q+
Sbjct: 2 IYPYKEHKPDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLS 61
Query: 125 VLHAAWNSPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTI 184
LH + N +LL IE TIG +L S I
Sbjct: 62 CLHQSPNK--------TLL-----------------------IEDDATIGHQVTLHSAVI 90
Query: 185 EPECIIGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEETLE 244
+IG SI+++G+ + A + AGS++PPG+ IP G L G PA+ +R LT E+ +
Sbjct: 91 RKNALIGMGSIILDGAEIGEGAFIGAGSLVPPGKIIPPGHLAFGRPAKVIRPLTEEDRKD 150
Query: 245 IPKLAVAINDLSKSHFSEFL 264
+ ++ + K + +FL
Sbjct: 151 MQRIRSEY--VEKGQYYKFL 168
>sp|Q57752|Y304_METJA Uncharacterized protein MJ0304 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0304 PE=3 SV=1
Length = 159
Score = 84.3 bits (207), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 31/178 (17%)
Query: 81 VAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPYRFVGFV 140
+A V+ G VT+ D +SVW +V+RGD++KI +G SN+Q+ CV+H + P
Sbjct: 8 IAKGAVIVGDVTIGDYSSVWYNAVIRGDVDKIIIGNYSNIQDCCVVHCSKGYP------- 60
Query: 141 SLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILMEGS 200
T I +V+IG + C IE ++G ++ ++ G+
Sbjct: 61 ------------------------TIIGDYVSIGHGAVIHGCRIEDNVLVGMNATILNGA 96
Query: 201 MVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEETLEIPKLAVAINDLSKS 258
+ + I+ A +++ + IP L G P R VR LT EE I + A+ LS++
Sbjct: 97 KIGENCIIGANALVTQNKEIPPNSLVLGVPGRVVRELTEEEIKSIKENALRYVKLSET 154
>sp|P40882|Y3753_PSEAE Uncharacterized protein PA3753 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA3753
PE=3 SV=2
Length = 174
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 31/161 (19%)
Query: 78 DAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNSPYRFV 137
D+++AP+ + G+V + GASVW G+VLRGD I +G SNVQ+ V+H P
Sbjct: 15 DSWIAPSAAVIGKVRLDAGASVWFGAVLRGDNELIHIGEHSNVQDGSVMHTDMGYP---- 70
Query: 138 GFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIGQHSILM 197
++ + VT+G L C++ ++G +++++
Sbjct: 71 ---------------------------LTLGKGVTVGHNAMLHGCSVGDYSLVGINAVIL 103
Query: 198 EGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLT 238
G+ + + I+ A +++P G+ IP G L G+P + VR L+
Sbjct: 104 NGAKIGKYCIIGANALIPEGKEIPDGSLVMGSPGKVVRELS 144
>sp|B5F748|CAIE_SALA4 Carnitine operon protein CaiE OS=Salmonella agona (strain SL483)
GN=caiE PE=3 SV=1
Length = 198
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+M+ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAMIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|B5FHG3|CAIE_SALDC Carnitine operon protein CaiE OS=Salmonella dublin (strain
CT_02021853) GN=caiE PE=3 SV=1
Length = 198
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|Q8Z9L6|CAIE_SALTI Carnitine operon protein CaiE OS=Salmonella typhi GN=caiE PE=3 SV=1
Length = 198
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|Q8ZRX6|CAIE_SALTY Carnitine operon protein CaiE OS=Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720) GN=caiE PE=3 SV=1
Length = 198
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|B4TWR2|CAIE_SALSV Carnitine operon protein CaiE OS=Salmonella schwarzengrund (strain
CVM19633) GN=caiE PE=3 SV=1
Length = 198
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|B5BL53|CAIE_SALPK Carnitine operon protein CaiE OS=Salmonella paratyphi A (strain
AKU_12601) GN=caiE PE=3 SV=1
Length = 198
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|C0Q4L1|CAIE_SALPC Carnitine operon protein CaiE OS=Salmonella paratyphi C (strain
RKS4594) GN=caiE PE=3 SV=1
Length = 198
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|Q5PIL2|CAIE_SALPA Carnitine operon protein CaiE OS=Salmonella paratyphi A (strain
ATCC 9150 / SARB42) GN=caiE PE=3 SV=1
Length = 198
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|B4T6J4|CAIE_SALNS Carnitine operon protein CaiE OS=Salmonella newport (strain SL254)
GN=caiE PE=3 SV=1
Length = 198
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|B4TIG8|CAIE_SALHS Carnitine operon protein CaiE OS=Salmonella heidelberg (strain
SL476) GN=caiE PE=3 SV=1
Length = 198
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|B5RGA3|CAIE_SALG2 Carnitine operon protein CaiE OS=Salmonella gallinarum (strain
287/91 / NCTC 13346) GN=caiE PE=3 SV=1
Length = 198
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|B5R1Q8|CAIE_SALEP Carnitine operon protein CaiE OS=Salmonella enteritidis PT4 (strain
P125109) GN=caiE PE=3 SV=1
Length = 198
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|B1LFW8|CAIE_ECOSM Carnitine operon protein CaiE OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=caiE PE=3 SV=1
Length = 196
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLLVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
>sp|B7UI81|CAIE_ECO27 Carnitine operon protein CaiE OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
>sp|Q1RGG3|CAIE_ECOUT Carnitine operon protein CaiE OS=Escherichia coli (strain UTI89 /
UPEC) GN=caiE PE=3 SV=2
Length = 196
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
>sp|Q8FLA7|CAIE_ECOL6 Carnitine operon protein CaiE OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=caiE PE=3 SV=2
Length = 196
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
>sp|Q0TLV4|CAIE_ECOL5 Carnitine operon protein CaiE OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
>sp|A1A785|CAIE_ECOK1 Carnitine operon protein CaiE OS=Escherichia coli O1:K1 / APEC
GN=caiE PE=3 SV=2
Length = 196
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
>sp|B7MAF8|CAIE_ECO45 Carnitine operon protein CaiE OS=Escherichia coli O45:K1 (strain
S88 / ExPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
>sp|B7N7R0|CAIE_ECOLU Carnitine operon protein CaiE OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
>sp|B7MNP2|CAIE_ECO81 Carnitine operon protein CaiE OS=Escherichia coli O81 (strain ED1a)
GN=caiE PE=3 SV=1
Length = 196
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDE 148
>sp|A9MYJ4|CAIE_SALPB Carnitine operon protein CaiE OS=Salmonella paratyphi B (strain
ATCC BAA-1250 / SPB7) GN=caiE PE=3 SV=1
Length = 198
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD ++ + SN+Q C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQYGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|Q57TJ2|CAIE_SALCH Carnitine operon protein CaiE OS=Salmonella choleraesuis (strain
SC-B67) GN=caiE PE=3 SV=1
Length = 198
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V DA+V P+ VL G V V G + P + LRGD + + SN+Q+ C++H
Sbjct: 10 IPVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRQILEAGSNLQDGCIMHG--- 66
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C + + ++G
Sbjct: 67 ----------------------------YCDTDTIVHENGHIGHGAILHGCVVGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + +L G+PAR +R +T +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQE 148
>sp|P39206|CAIE_ECOLI Carnitine operon protein CaiE OS=Escherichia coli (strain K12)
GN=caiE PE=3 SV=2
Length = 196
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCLIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR ++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRNVSDDE 148
>sp|B1XBG0|CAIE_ECODH Carnitine operon protein CaiE OS=Escherichia coli (strain K12 /
DH10B) GN=caiE PE=3 SV=1
Length = 196
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCLIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR ++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRNVSDDE 148
>sp|C4ZPW1|CAIE_ECOBW Carnitine operon protein CaiE OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=caiE PE=3 SV=1
Length = 196
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCLIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR ++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRNVSDDE 148
>sp|P77181|PAAY_ECOLI Phenylacetic acid degradation protein PaaY OS=Escherichia coli
(strain K12) GN=paaY PE=3 SV=1
Length = 196
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 31/169 (18%)
Query: 73 PKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWNS 132
P V +++V P VL G V + G V P + LRGD +I V +N+Q+ CV+H
Sbjct: 11 PVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMH----- 65
Query: 133 PYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIGQ 192
GF P +T + IG L C I ++G
Sbjct: 66 -----GF-----------PEQ----------DTVVGEDGHIGHSAILHGCIIRRNALVGM 99
Query: 193 HSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
++++M+G+++ ++I+ A + + +P L G+PA+ +R L+ +E
Sbjct: 100 NAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSEQE 148
>sp|B7NHD9|CAIE_ECO7I Carnitine operon protein CaiE OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=caiE PE=3 SV=1
Length = 196
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G R +L G PAR VR ++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAISFVKAGFRGEKRQLLMGTPARAVRNVSDDE 148
>sp|Q8GB16|CAIE_PROSL Carnitine operon protein CaiE OS=Proteus sp. (strain LE138) GN=caiE
PE=3 SV=1
Length = 197
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V AY+ P+ VL G V + G + P + LRGD ++ V +N+Q+ CV+H
Sbjct: 10 IPVVHPTAYIHPSAVLIGDVIIGAGVYIGPLASLRGDYGRLIVEAGANLQDGCVMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T ++ IG L SC I + ++G
Sbjct: 66 ---------------------------GYTDMDTIVQENGHIGHGAILHSCIIGRDSLVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G + ++ G+PA+ VR ++ ++
Sbjct: 99 MNSVIMDGAIIGEESIVAAMSFVKAGFQGQARQMLMGSPAKHVRDISDQD 148
>sp|B5YYC9|CAIE_ECO5E Carnitine operon protein CaiE OS=Escherichia coli O157:H7 (strain
EC4115 / EHEC) GN=caiE PE=3 SV=1
Length = 196
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYTDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDE 148
>sp|Q8XA36|CAIE_ECO57 Carnitine operon protein CaiE OS=Escherichia coli O157:H7 GN=caiE
PE=3 SV=2
Length = 196
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYTDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDE 148
>sp|Q3Z5X4|CAIE_SHISS Carnitine operon protein CaiE OS=Shigella sonnei (strain Ss046)
GN=caiE PE=3 SV=2
Length = 196
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDE 148
>sp|A7ZVY5|CAIE_ECOHS Carnitine operon protein CaiE OS=Escherichia coli O9:H4 (strain HS)
GN=caiE PE=3 SV=1
Length = 196
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDE 148
>sp|B7M0D2|CAIE_ECO8A Carnitine operon protein CaiE OS=Escherichia coli O8 (strain IAI1)
GN=caiE PE=3 SV=1
Length = 196
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDE 148
>sp|B7L4F8|CAIE_ECO55 Carnitine operon protein CaiE OS=Escherichia coli (strain 55989 /
EAEC) GN=caiE PE=3 SV=1
Length = 196
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDE 148
>sp|A7ZHC6|CAIE_ECO24 Carnitine operon protein CaiE OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=caiE PE=3 SV=1
Length = 196
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDE 148
>sp|B7LWM6|CAIE_ESCF3 Carnitine operon protein CaiE OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=caiE PE=3 SV=1
Length = 196
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 31/172 (18%)
Query: 70 QWVPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAA 129
+ +P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 8 RLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH-- 65
Query: 130 WNSPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECI 189
+ +T + IG L C I + +
Sbjct: 66 -----------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDAL 96
Query: 190 IGQHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+G +S++M+G+++ +I+ A S + G +L G PAR VR+++ +E
Sbjct: 97 VGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDE 148
>sp|Q83SQ8|CAIE_SHIFL Carnitine operon protein CaiE OS=Shigella flexneri GN=caiE PE=3
SV=2
Length = 196
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDE 148
>sp|Q0T8F9|CAIE_SHIF8 Carnitine operon protein CaiE OS=Shigella flexneri serotype 5b
(strain 8401) GN=caiE PE=3 SV=2
Length = 196
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 72 VPKVAVDAYVAPNVVLAGQVTVCDGASVWPGSVLRGDLNKITVGFCSNVQERCVLHAAWN 131
+P V A+V P+ VL G V V G + P + LRGD ++ V +N+Q+ C++H
Sbjct: 10 IPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMH---- 65
Query: 132 SPYRFVGFVSLLIDLQMSCPRSNSLYIAWLPAETSIERFVTIGAYCSLRSCTIEPECIIG 191
+ +T + IG L C I + ++G
Sbjct: 66 ---------------------------GYCDTDTIVGENGHIGHGAILHGCVIGRDALVG 98
Query: 192 QHSILMEGSMVETHAILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEE 241
+S++M+G+++ +I+ A S + G +L G PAR VR+++ +E
Sbjct: 99 MNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDE 148
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,241,373
Number of Sequences: 539616
Number of extensions: 3985116
Number of successful extensions: 12464
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 12123
Number of HSP's gapped (non-prelim): 422
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)