BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039847
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XIE3|HS17A_ARATH 17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana
GN=HSP17.6A PE=1 SV=1
Length = 155
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 14/114 (12%)
Query: 31 NINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVM 90
N +W + + +FKA LP G K EE+K+E ED +LK+S G+ + E
Sbjct: 45 NARVDWKETAEAHVFKADLP-GMKKEEVKVE-IEDDSVLKIS-----GERHVEKEEKQDT 97
Query: 91 WVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKKK 144
W E S G S+ F LPE V K + KAS+E+GVL V K+++ KK
Sbjct: 98 WHRVERSSGG-----FSRKFRLPENV--KMDQVKASMENGVLTVTVPKVETNKK 144
>sp|Q84J50|HS177_ORYSJ 17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP17.7 PE=2 SV=1
Length = 159
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 64/132 (48%), Gaps = 20/132 (15%)
Query: 12 LVPAANAFVTAVKPALEFLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKL 71
L P AN+ A F +W + + +FKA +P G K EE+K+E +DG +L++
Sbjct: 38 LFPRANSDAAA------FAGARIDWKETPEVHVFKADVP-GLKKEEVKVE-VDDGNILQI 89
Query: 72 SKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGV 131
S G+ + E + W E S GK + F LPE KP KAS+E+GV
Sbjct: 90 S-----GERSREQEEKSDKWHRVERSS---GKF--LRRFRLPENT--KPEQIKASMENGV 137
Query: 132 LNVIFTKLKSKK 143
L V K + KK
Sbjct: 138 LTVTVPKEEPKK 149
>sp|P13853|HS17C_ARATH 17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana
GN=HSP17.6C PE=2 SV=2
Length = 157
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 17/122 (13%)
Query: 25 PALE---FLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNG 81
PA++ F N +W + + +FKA LP G + EE+K+E EDG +L++S G+
Sbjct: 40 PAMDVAAFTNAKVDWRETPEAHVFKADLP-GLRKEEVKVE-VEDGNILQIS-----GERS 92
Query: 82 DGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKS 141
+ E W E S GK ++ F LPE K KAS+E+GVL+V K+
Sbjct: 93 NENEEKNDKWHRVERSS---GKF--TRRFRLPENA--KMEEIKASMENGVLSVTVPKVPE 145
Query: 142 KK 143
KK
Sbjct: 146 KK 147
>sp|Q9LNW0|HS178_ARATH 17.8 kDa class I heat shock protein OS=Arabidopsis thaliana
GN=HSP17.8 PE=2 SV=1
Length = 157
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 31 NINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVM 90
N +W + + +FKA LP G K EE+K+E ED +LK+S G+ + E
Sbjct: 47 NARVDWKETAEAHVFKADLP-GMKKEEVKVE-IEDDSVLKIS-----GERHVEKEEKQDT 99
Query: 91 WVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKKK 144
W E S S+ F LPE V K + KAS+E+GVL V K++ KK
Sbjct: 100 WHRVERSSG-----QFSRKFKLPENV--KMDQVKASMENGVLTVTVPKVEEAKK 146
>sp|Q84Q77|HS17A_ORYSJ 17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP17.9A PE=2 SV=1
Length = 161
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 29 FLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAA 88
F +W + + +FKA +P G K EE+K+E +DG +L++S G+ + E
Sbjct: 51 FAGARIDWKETPEAHVFKADVP-GLKKEEVKVE-VDDGNILQIS-----GERNKEQEEKT 103
Query: 89 VMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKK 143
W E S GK + F LP+ KP KAS+E+GVL V K ++KK
Sbjct: 104 DQWHRVERSS---GKF--LRRFRLPDNA--KPEQIKASMENGVLTVTVPKEEAKK 151
>sp|P04794|HSP14_SOYBN 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E
PE=3 SV=1
Length = 154
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 29 FLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAA 88
F++ +W + + +FKA +P G K EE+K++ ED ++L++S G+ + +
Sbjct: 44 FVSTRVDWKETPEAHVFKADIP-GLKKEEVKVQ-IEDDRVLQIS-----GERNVEKEDKN 96
Query: 89 VMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKK 143
W E S GK ++ F LPE V N KAS+E+GVL V K + KK
Sbjct: 97 DTWHRVERSS---GKF--TRRFRLPENAKV--NEVKASMENGVLTVTVPKEEVKK 144
>sp|P02519|HSP11_SOYBN 17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B
PE=3 SV=1
Length = 153
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 29 FLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAA 88
F++ +W + + +FKA +P G K EE+K+E +DG++L++S G+ + +
Sbjct: 43 FVSTRVDWKETPEAHVFKADIP-GLKKEEVKLE-IQDGRVLQIS-----GERNVEKEDKN 95
Query: 89 VMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKK 143
W E S GK+ + F LPE V + KAS+E+GVL V K + KK
Sbjct: 96 DTWHRVERSS---GKL--VRRFRLPENAKV--DQVKASMENGVLTVTVPKEEIKK 143
>sp|P04793|HSP13_SOYBN 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M
PE=3 SV=1
Length = 153
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 18/117 (15%)
Query: 29 FLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLS--KVLPEGDNGDGEHE 86
F+N +W + + +F+A +P G K EE+K++ ED ++L++S + L + D D H
Sbjct: 43 FVNTRVDWKETPEAHVFEADIP-GLKKEEVKVQ-IEDDRVLQISGERNLEKEDKNDTWHR 100
Query: 87 AAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKK 143
SSG+ + F LPE V+ KAS+E+GVL V K + KK
Sbjct: 101 VE--------RSSGN----FMRRFRLPENAKVE--QVKASMENGVLTVTVPKEEVKK 143
>sp|P05478|HSP16_SOYBN 18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C
PE=3 SV=1
Length = 161
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 14 PAANAFVTAVKPALE-----FLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKL 68
P N +A P F++ +W + + +FKA +P G K EE+K++ ED K+
Sbjct: 31 PFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIP-GLKKEEVKVQ-IEDDKV 88
Query: 69 LKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVE 128
L++S G+ + + W E S GK + F LPE V+ KAS+E
Sbjct: 89 LQIS-----GERNVEKEDKNDTWHRVERSS---GKF--MRRFRLPENAKVE--QVKASME 136
Query: 129 DGVLNVIFTKLKSKK 143
+GVL V K + KK
Sbjct: 137 NGVLTVTVPKEEVKK 151
>sp|Q943E9|HS17B_ORYSJ 17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica
GN=HSP17.9B PE=2 SV=1
Length = 166
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 17/118 (14%)
Query: 29 FLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLS--KVLPEGDNGDGEHE 86
F N E + + +F+A LP G K EE+++E ++G +L ++ + + + G H
Sbjct: 38 FANTYIESRETAEAYVFRADLPAGVKKEEVRVE-VDEGNVLVITGERSVRREEKGQRSHH 96
Query: 87 AAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKKK 144
++ C++ G+ F+LP+ +V + +AS++ G+L V K+ + K+
Sbjct: 97 ------IERSCATFFGR------FHLPDDAVV--DLVRASMDGGMLTVTVPKVVTDKQ 140
>sp|Q652V8|HSP16_ORYSJ 16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp.
japonica GN=HSP16.0 PE=2 SV=1
Length = 146
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 35 EWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGD-NGDGEHEAAVMWVL 93
+W + + + + +P G +++K++ EDG +L + P + E E V+W +
Sbjct: 33 DWVETPTSHVLRINVP-GLGKDDVKVQ-VEDGNVLTVRGAAPHAAAEKEREREKDVVWHV 90
Query: 94 KECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKKKIMSKVLGVV 153
E G+ + ++ LP V V+ +ASV++GVL V+ K + + ++ + V
Sbjct: 91 AE-----RGRPEFAREVALPAEVRVE--QIRASVDNGVLTVVVPKEPAPARPRTRPIAVS 143
Query: 154 AK 155
+K
Sbjct: 144 SK 145
>sp|P30693|HSP11_HELAN 17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6
PE=2 SV=1
Length = 153
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 20 VTAVKPALE---FLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLP 76
+ + +PA E +N +W + + + KA LP K EDG++L++S
Sbjct: 30 IISTEPARETAAIVNARIDWKETPEAHVLKADLPGMKKE--EVKVEVEDGRVLQIS---- 83
Query: 77 EGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIF 136
G+ + E W E S GK + F LPE K + KA +E+GVL V+
Sbjct: 84 -GERCREQEEKDDTWHRVERSS---GKF--IRRFRLPENA--KMDEVKAMMENGVLTVVV 135
Query: 137 TKLKSKKKIMSKVLGV 152
K + +KK M K + +
Sbjct: 136 PKEEEEKKPMVKAIDI 151
>sp|P31673|HS174_ORYSJ 17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP17.4 PE=2 SV=2
Length = 154
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 12 LVPAANAFVTAVKPALEFLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKL 71
L P AN+ A F +W + + +FKA +P +E EDG +L++
Sbjct: 33 LFPRANSDAAA------FAGARIDWKETPEAHVFKADVPG--LKKEEVKVEVEDGNVLQI 84
Query: 72 SKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGV 131
S G+ + E W E S GK + F LPE KP KAS+E+GV
Sbjct: 85 S-----GERIKEQEEKTDKWHRVERSS---GKF--LRRFRLPENT--KPEQIKASMENGV 132
Query: 132 LNVIFTKLKSKK 143
L V K + KK
Sbjct: 133 LTVTVPKEEPKK 144
>sp|Q84Q72|HS181_ORYSJ 18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP18.1 PE=2 SV=1
Length = 161
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 14/115 (12%)
Query: 29 FLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAA 88
F +W + + +FKA +P K EDG +L++S G+ + E
Sbjct: 51 FAGARIDWKETPEAHVFKADVPGLKKE--EVKVEVEDGNVLQIS-----GERSKEQEEKT 103
Query: 89 VMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKK 143
W E S GK + F LPE KP KAS+E+GVL V K + KK
Sbjct: 104 DKWHRVERSS---GKF--LRRFRLPENT--KPEQIKASMENGVLTVTVPKEEPKK 151
>sp|P19036|HSP17_ARATH 17.4 kDa class I heat shock protein OS=Arabidopsis thaliana
GN=HSP17.4A PE=1 SV=2
Length = 156
Score = 33.5 bits (75), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 29 FLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAA 88
F N +W + + +FKA +P +E EDG +L++S G+ E +
Sbjct: 46 FTNAKVDWRETPEAHVFKADVPG--LKKEEVKVEVEDGNILQIS-----GERSSENEEKS 98
Query: 89 VMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKK 143
W E S GK + F LPE V+ KAS+E+GVL+V K++ K
Sbjct: 99 DTWHRVERSS---GKF--MRRFRLPENAKVE--EVKASMENGVLSVTVPKVQESK 146
>sp|Q5VYX0|RNLS_HUMAN Renalase OS=Homo sapiens GN=RNLS PE=1 SV=1
Length = 342
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 13 VPAANAFVTAVKPALEFLNI-----NGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGK 67
VP A ++T+ P + F++I N E + G +L+ T+P G E IE ++
Sbjct: 208 VPWAGQYITS-NPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQELV 266
Query: 68 LLKLSKVLP 76
+L +LP
Sbjct: 267 FQQLENILP 275
>sp|Q38806|HSP22_ARATH 22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2
SV=1
Length = 195
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 35 EWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLK 94
+W + + +P G K +E+KIE E+G +L++S G+ E + W
Sbjct: 74 DWKETAEGHEIMLDIP-GLKKDEVKIEVEENG-VLRVS-----GERKREEEKKGDQW--- 123
Query: 95 ECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKKKIMSKVLGVVA 154
GK + F LP+ V ++ KA +E+GVL + TKL +K +V+ + A
Sbjct: 124 HRVERSYGKF--WRQFKLPDNVDME--SVKAKLENGVLTINLTKLSPEKVKGPRVVNIAA 179
Query: 155 K 155
+
Sbjct: 180 E 180
>sp|Q7XUW5|HS232_ORYSJ 23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica
GN=HSP23.2 PE=2 SV=2
Length = 215
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 18/124 (14%)
Query: 35 EWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDN----GDGEHEAAVM 90
+W + GD +P G + E+L++E ED ++L++S + G G+H
Sbjct: 79 DWRETGDAHEVVVDVP-GMRKEDLRVE-VEDNRVLRISGERRREETTEQKGGGDH----- 131
Query: 91 WVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKKKIMSKVL 150
W +E + LP+ + + AS+++GVL V F KL + +V+
Sbjct: 132 WHREERSYG-----RFWRQLRLPDNADL--DSIAASLDNGVLTVRFRKLAPDQIKGPRVV 184
Query: 151 GVVA 154
G+ +
Sbjct: 185 GIAS 188
>sp|Q9ZW31|HS17B_ARATH 17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana
GN=HSP17.6B PE=2 SV=1
Length = 153
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 30 LNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLS--KVLPEGDNGDGEHEA 87
+N +W + + +FKA LP G K EE+K+E ED +LK+S + + + D D H
Sbjct: 44 VNARVDWRETPEAHVFKADLP-GLKKEEVKVEIEEDS-VLKISGERHVEKEDKNDTWHRV 101
Query: 88 AVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKK 143
SSG ++ F LPE V K + KA++E+GVL V K ++KK
Sbjct: 102 E--------RSSGQ----FTRRFRLPENV--KMDQVKAAMENGVLTVTVPKAETKK 143
>sp|A1S8S8|SYL_SHEAM Leucine--tRNA ligase OS=Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B) GN=leuS PE=3 SV=2
Length = 859
Score = 32.0 bits (71), Expect = 2.3, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 30/70 (42%)
Query: 75 LPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNV 134
+P D D E LK DG++DIS++ +GV+ F DG N
Sbjct: 338 VPAHDQRDYEFAKKYGLALKAVIKPADGEVDISEAAYTEKGVLFNSAEFDGLDFDGAFNA 397
Query: 135 IFTKLKSKKK 144
I KL ++ K
Sbjct: 398 IADKLAAEGK 407
>sp|Q943E7|HS16C_ORYSJ 16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp.
japonica GN=HSP16.9C PE=2 SV=1
Length = 149
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 19/132 (14%)
Query: 12 LVPAANAFVTAVKPALEFLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKL 71
LVPA + TA F N +W + ++ +FKA LP K E + ++
Sbjct: 27 LVPATSDRDTAA-----FANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISG 81
Query: 72 SKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGV 131
+ + D D H SSG + F LPE V + KAS+E+GV
Sbjct: 82 QRSKEKEDKNDKWHRVE--------RSSG----QFMRRFRLPENAKV--DQVKASMENGV 127
Query: 132 LNVIFTKLKSKK 143
L V K + KK
Sbjct: 128 LTVTVPKAEVKK 139
>sp|Q9Y6D9|MD1L1_HUMAN Mitotic spindle assembly checkpoint protein MAD1 OS=Homo sapiens
GN=MAD1L1 PE=1 SV=2
Length = 718
Score = 31.6 bits (70), Expect = 2.7, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 40 GDNLMFKATLPTGTKMEELKIE-STEDGKLLKL 71
GD L+FKAT P+G+KM+ L+ E S G+L+++
Sbjct: 660 GDCLIFKATSPSGSKMQLLETEFSHTVGELIEV 692
>sp|A4IQ78|AROA_GEOTN 3-phosphoshikimate 1-carboxyvinyltransferase OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=aroA PE=3 SV=1
Length = 432
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 14/84 (16%)
Query: 53 TKMEELK-----IESTEDGKLLKLSKVLPEGD---NGDGEHEAAVMWVLKECCSSGDGKI 104
T + ELK IE+T+DG +++ L + G+H +M + CC+ G ++
Sbjct: 352 TVVAELKKFGADIEATDDGMIIRGKTALYADGIVVDSHGDHRIGMMLAIAACCAKGTARL 411
Query: 105 DISKSFNLPEGVIVKPNCFKASVE 128
+ PE V V F A +
Sbjct: 412 E------RPEAVAVSYPAFFADLR 429
>sp|B9EAC1|HIS8_MACCJ Histidinol-phosphate aminotransferase OS=Macrococcus caseolyticus
(strain JCSC5402) GN=hisC PE=3 SV=1
Length = 350
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 123 FKASVEDGVLNVIFTKLKSKKKIMSKVL--GVVAKAVPVVVLIAVNIVDDN 171
+K + D V N IF K + + ++ GV+A+ +P V I++ DDN
Sbjct: 288 YKEHLIDSVTNFIFVKTNQPEALFEALIKGGVIARPMPNGVRISIGTRDDN 338
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,760,065
Number of Sequences: 539616
Number of extensions: 2761660
Number of successful extensions: 4727
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 4720
Number of HSP's gapped (non-prelim): 40
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)