Query 039847
Match_columns 172
No_of_seqs 171 out of 1082
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 03:29:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039847.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039847hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gla_A Low molecular weight he 100.0 8E-29 2.7E-33 179.6 13.9 97 30-141 3-99 (100)
2 1gme_A Heat shock protein 16.9 100.0 7.3E-29 2.5E-33 193.3 13.4 112 25-150 37-148 (151)
3 4fei_A Heat shock protein-rela 99.9 2.9E-27 1E-31 172.8 9.9 94 29-142 4-97 (102)
4 4eld_A MJ16.5-P1, small heat s 99.9 1.5E-26 5.2E-31 181.3 13.7 105 31-149 56-160 (161)
5 3aab_A Putative uncharacterize 99.9 7.2E-26 2.5E-30 170.2 10.0 96 29-143 22-119 (123)
6 2wj5_A Heat shock protein beta 99.9 6.1E-25 2.1E-29 160.6 10.5 95 33-149 3-98 (101)
7 3l1e_A Alpha-crystallin A chai 99.9 6.3E-24 2.1E-28 156.6 13.0 96 33-150 4-103 (106)
8 3q9p_A Heat shock protein beta 99.9 4.7E-23 1.6E-27 146.3 10.2 83 36-140 2-85 (85)
9 2y1y_A Alpha-crystallin B chai 99.9 1.4E-22 4.7E-27 145.0 10.4 87 37-145 2-89 (90)
10 2klr_A Alpha-crystallin B chai 99.9 6.5E-22 2.2E-26 158.0 10.2 89 33-143 65-154 (175)
11 2bol_A TSP36, small heat shock 99.8 5.3E-21 1.8E-25 165.0 11.1 91 30-143 97-192 (314)
12 2bol_A TSP36, small heat shock 99.8 4.2E-21 1.4E-25 165.6 8.8 90 32-140 221-314 (314)
13 1rl1_A Suppressor of G2 allele 99.1 1.1E-09 3.9E-14 80.1 10.2 82 30-141 8-89 (114)
14 2xcm_C SGT1-like protein, cyto 99.0 1E-09 3.6E-14 77.0 8.9 81 31-141 2-82 (92)
15 2k8q_A Protein SHQ1; beta-sand 97.9 2.6E-05 8.7E-10 59.7 6.8 76 31-141 3-83 (134)
16 3eud_A Protein SHQ1; CS domain 97.8 0.00029 1E-08 52.5 11.1 81 28-142 14-98 (115)
17 1x5m_A Calcyclin-binding prote 97.7 0.00083 2.8E-08 49.9 11.9 81 31-141 20-104 (127)
18 1wh0_A Ubiquitin carboxyl-term 97.5 0.00085 2.9E-08 50.8 10.2 93 30-141 18-112 (134)
19 1wgv_A KIAA1068 protein; CS do 97.4 0.0031 1.1E-07 46.5 12.1 83 30-141 18-102 (124)
20 1ejf_A Progesterone receptor P 97.3 0.0018 6.1E-08 48.0 9.5 79 32-141 4-82 (125)
21 3igf_A ALL4481 protein; two-do 97.2 0.0012 4.2E-08 57.5 8.8 73 31-139 297-369 (374)
22 3qor_A Nuclear migration prote 97.2 0.0029 9.9E-08 46.7 9.5 80 30-141 15-97 (121)
23 2o30_A Nuclear movement protei 97.0 0.0057 1.9E-07 45.6 9.3 78 31-141 4-81 (131)
24 2rh0_A NUDC domain-containing 97.0 0.01 3.5E-07 45.8 10.9 79 30-141 12-91 (157)
25 2kmw_A Uncharacterized protein 96.9 0.0039 1.3E-07 47.9 8.3 78 31-141 4-82 (150)
26 1wfi_A Nuclear distribution ge 96.9 0.0041 1.4E-07 46.2 7.8 79 31-141 7-88 (131)
27 2cg9_X CO-chaperone protein SB 96.7 0.00087 3E-08 50.5 3.0 85 30-140 5-97 (134)
28 3q9p_A Heat shock protein beta 68.4 10 0.00035 25.4 5.1 32 106-140 9-40 (85)
29 1rl6_A Protein (ribosomal prot 63.0 11 0.00037 29.4 5.0 45 56-139 12-56 (177)
30 1nkw_E 50S ribosomal protein L 60.9 13 0.00045 29.9 5.2 50 46-139 35-84 (212)
31 2cql_A OK/SW-CL.103, 60S ribos 55.9 18 0.00061 25.5 4.6 23 46-75 16-38 (100)
32 2y1y_A Alpha-crystallin B chai 54.8 20 0.00068 24.1 4.6 31 106-139 8-38 (90)
33 3l1e_A Alpha-crystallin A chai 53.4 22 0.00074 24.8 4.8 30 106-138 14-43 (106)
34 2wj5_A Heat shock protein beta 53.0 21 0.00073 24.6 4.6 31 106-139 13-43 (101)
35 3v2d_H 50S ribosomal protein L 52.7 29 0.001 26.9 5.8 18 56-75 13-30 (180)
36 2nwt_A UPF0165 protein AF_2212 51.2 11 0.00037 25.3 2.6 15 121-135 3-17 (69)
37 3j21_F 50S ribosomal protein L 50.4 38 0.0013 26.5 6.2 24 45-75 9-32 (184)
38 4fei_A Heat shock protein-rela 49.5 37 0.0013 23.2 5.4 31 43-75 63-93 (102)
39 3gla_A Low molecular weight he 48.9 31 0.001 23.3 4.9 32 42-75 65-96 (100)
40 1vq8_E 50S ribosomal protein L 46.0 35 0.0012 26.5 5.3 51 46-139 5-55 (178)
41 3r8s_G 50S ribosomal protein L 43.8 16 0.00054 28.4 3.0 18 56-75 12-29 (176)
42 4eld_A MJ16.5-P1, small heat s 42.5 58 0.002 24.1 6.0 32 106-140 68-99 (161)
43 3aab_A Putative uncharacterize 41.5 53 0.0018 23.1 5.4 33 106-141 36-69 (123)
44 3iz5_F 60S ribosomal protein L 40.1 59 0.002 25.4 5.8 22 47-75 10-31 (190)
45 1ew4_A CYAY protein; friedreic 38.6 18 0.00062 25.8 2.4 18 122-139 29-46 (106)
46 3u5e_H L8, RP24, YL11, 60S rib 34.8 60 0.002 25.4 5.1 23 46-75 9-31 (191)
47 1gme_A Heat shock protein 16.9 31.9 70 0.0024 23.5 4.8 32 42-75 105-136 (151)
48 2klr_A Alpha-crystallin B chai 31.8 55 0.0019 25.0 4.3 31 106-139 75-105 (175)
49 2gjh_A Designed protein; oblig 31.0 39 0.0013 21.4 2.7 19 55-75 32-50 (62)
50 3oeq_A Frataxin homolog, mitoc 27.9 42 0.0015 24.7 2.9 17 123-139 49-65 (123)
51 3bbo_I Ribosomal protein L6; l 26.8 49 0.0017 26.7 3.4 45 56-139 55-100 (223)
52 3t3l_A Frataxin, mitochondrial 23.9 44 0.0015 24.6 2.4 17 121-137 40-56 (129)
53 3agx_A DNAJ homolog subfamily 22.7 1.3E+02 0.0044 22.8 5.0 23 43-75 43-65 (181)
54 3pic_A CIP2; alpha/beta hydrol 22.4 91 0.0031 27.0 4.4 44 120-163 67-112 (375)
55 2zkr_e 60S ribosomal protein L 21.9 75 0.0026 24.9 3.5 19 55-75 13-31 (192)
56 1nlt_A Protein YDJ1, mitochond 21.9 83 0.0029 25.1 3.9 91 43-151 112-211 (248)
57 2ks0_A Uncharacterized protein 20.8 72 0.0025 21.2 2.7 22 52-75 17-38 (71)
No 1
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.96 E-value=8e-29 Score=179.58 Aligned_cols=97 Identities=16% Similarity=0.265 Sum_probs=87.8
Q ss_pred cCceeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEE
Q 039847 30 LNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKS 109 (172)
Q Consensus 30 ~~p~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~ 109 (172)
+.|++||+|++++|+|.++|| |++++||+|++ +++.|+|+|++ ..+.+.++.+|+++|| ++| + |.|+
T Consensus 3 ~~P~~di~e~~~~~~v~~~lP-G~~~edi~v~~--~~~~L~I~g~~-----~~~~~~~~~~~~~~er-~~g--~--f~r~ 69 (100)
T 3gla_A 3 WVPRVDIKEEVNHFVLYADLP-GIDPSQIEVQM--DKGILSIRGER-----KSESSTETERFSRIER-RYG--S--FHRR 69 (100)
T ss_dssp SCCCEEEEECSSEEEEEEECT-TSCGGGCEEEE--ETTEEEEEEEE-----CCGGGSSGGGEEEECC-CCE--E--EEEE
T ss_pred ccCcEEEEECCCEEEEEEECC-CCCHHHEEEEE--ECCEEEEEEEE-----cCcCccCCccEEEEee-cce--E--EEEE
Confidence 568999999999999999999 99999999999 67899999999 5555556778999999 888 8 9999
Q ss_pred EECCCCCcCCCCcEEEEEeCCEEEEEEeccCC
Q 039847 110 FNLPEGVIVKPNCFKASVEDGVLNVIFTKLKS 141 (172)
Q Consensus 110 f~LP~~vd~~~d~I~A~~~nGVL~V~vPK~~~ 141 (172)
|.||.+++. ++|+|+|+||||+|++||.+.
T Consensus 70 ~~LP~~vd~--~~i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 70 FALPDSADA--DGITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EECCTTBCT--TSCEEEEETTEEEEEEEBC--
T ss_pred EECCCCcCh--HHeEEEEeCCEEEEEEecCCC
Confidence 999999988 999999999999999999864
No 2
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.96 E-value=7.3e-29 Score=193.35 Aligned_cols=112 Identities=35% Similarity=0.508 Sum_probs=98.2
Q ss_pred ccccccCceeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCee
Q 039847 25 PALEFLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKI 104 (172)
Q Consensus 25 ~~~~~~~p~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~ 104 (172)
.....+.|++||+|++++|+|.++|| |++++||+|++ .+++.|+|+|++ +.+.+.++.+|+++|| ++| +
T Consensus 37 ~~~~~~~p~~di~e~~d~~~v~~dlP-Gv~kedI~V~v-~~~~~L~I~g~~-----~~~~~~~~~~~~~~Er-~~g--~- 105 (151)
T 1gme_A 37 ETAAFANARMDWKETPEAHVFKADLP-GVKKEEVKVEV-EDGNVLVVSGER-----TKEKEDKNDKWHRVER-SSG--K- 105 (151)
T ss_dssp SHHHHGGGCEEEEECSSEEEEEEECT-TCCGGGEEEEE-ETTTEEEEEECC-----CCCCCCTTCEEEECCC-CCC--C-
T ss_pred ccccccCCceEEEEcCCEEEEEEECC-CCChHHEEEEE-ecCCEEEEEEEE-----ccccccCCceEEEEeE-ecc--E-
Confidence 33455679999999999999999999 99999999999 457899999999 4444456678999999 888 8
Q ss_pred eEEEEEECCCCCcCCCCcEEEEEeCCEEEEEEeccCCCCcceeeec
Q 039847 105 DISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKKKIMSKVL 150 (172)
Q Consensus 105 ~F~R~f~LP~~vd~~~d~I~A~~~nGVL~V~vPK~~~~k~~~~~I~ 150 (172)
|.|+|.||.+++. ++|+|+|+||||+|++||.+..+++.++|.
T Consensus 106 -F~R~~~LP~~vd~--~~i~A~~~nGvL~I~lPK~~~~~~~~~~I~ 148 (151)
T 1gme_A 106 -FVRRFRLLEDAKV--EEVKAGLENGVLTVTVPKAEVKKPEVKAIQ 148 (151)
T ss_dssp -EEEEEECSSCCCG--GGCEEEEETTEEEEEEECCCCCTTCCCCCC
T ss_pred -EEEEEECCCCccc--cceEEEEECCEEEEEEEccCcCCCCCeEee
Confidence 9999999999988 999999999999999999988777666664
No 3
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.94 E-value=2.9e-27 Score=172.77 Aligned_cols=94 Identities=29% Similarity=0.404 Sum_probs=85.3
Q ss_pred ccCceeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEE
Q 039847 29 FLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISK 108 (172)
Q Consensus 29 ~~~p~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R 108 (172)
.+.|++||+|+++.|+|.++|| |++++||+|++ +++.|+|+|++ +. ..+|+++|| ++| + |.|
T Consensus 4 ~~~P~~di~e~~~~~~v~~~lP-G~~~edi~v~~--~~~~L~I~g~~-----~~-----~~~~~~~er-~~g--~--f~R 65 (102)
T 4fei_A 4 PWTPAADWRDAGTHLDLLLDVP-GVDAGTLALAE--DGGQLTVSGER-----PG-----TEHLLRSER-PSG--R--FVR 65 (102)
T ss_dssp ECCCCEEEEEETTEEEEEEECT-TCCGGGCEEEE--ETTEEEEEEEE-----CC-----CSSCSSCCS-EEE--E--EEE
T ss_pred cccCcEEEEEcCCEEEEEEECC-CCchHhEEEEE--ECCEEEEEEEE-----ec-----CCCEEEEEE-ecc--E--EEE
Confidence 3569999999999999999999 99999999999 67899999999 22 257889999 888 8 999
Q ss_pred EEECCCCCcCCCCcEEEEEeCCEEEEEEeccCCC
Q 039847 109 SFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKSK 142 (172)
Q Consensus 109 ~f~LP~~vd~~~d~I~A~~~nGVL~V~vPK~~~~ 142 (172)
+|.||.+++. ++|+|+|+||||+|++||.++.
T Consensus 66 ~~~LP~~vd~--~~i~A~~~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 66 ELAFPEPVRP--ASGVASLAGGVLTVRFEKLRPT 97 (102)
T ss_dssp EEECSSCBCT--TCCEEEEETTEEEEEEEBSSCC
T ss_pred EEECCCCcch--hHcEEEEECCEEEEEEEccCcc
Confidence 9999999988 9999999999999999998754
No 4
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.94 E-value=1.5e-26 Score=181.34 Aligned_cols=105 Identities=21% Similarity=0.221 Sum_probs=89.5
Q ss_pred CceeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEE
Q 039847 31 NINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSF 110 (172)
Q Consensus 31 ~p~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f 110 (172)
.+++||+|++++|+|.++|| |+++|||+|++ +++.|+|+|++ +.+.+.++.+|+++||-.+| + |.|+|
T Consensus 56 ~~pvdi~e~~~~~~v~~dlP-G~~~edi~V~~--~~~~L~I~g~~-----~~~~~~~~~~~~~~Er~~~g--~--f~R~~ 123 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAWLP-GVNKEDIILNA--VGDTLEIRAKR-----SPLMITESERIIYSEIPEEE--E--IYRTI 123 (161)
T ss_dssp CCCEEEEECSSEEEEEEECT-TCCGGGEEEEE--ETTEEEEEEEC-----CCCCCCSSCEEEEECSCCCC--E--EEEEE
T ss_pred ccceeEEEeCCEEEEEEECC-CCChHhEEEEE--ECCEEEEEEEE-----cccccCCCceEEEEEeeccc--c--EEEEE
Confidence 34599999999999999999 99999999999 67899999999 44333445679999982356 7 99999
Q ss_pred ECCCCCcCCCCcEEEEEeCCEEEEEEeccCCCCcceeee
Q 039847 111 NLPEGVIVKPNCFKASVEDGVLNVIFTKLKSKKKIMSKV 149 (172)
Q Consensus 111 ~LP~~vd~~~d~I~A~~~nGVL~V~vPK~~~~k~~~~~I 149 (172)
.||.+|+. ++|+|+|+||||+|++||.+..+++.+.|
T Consensus 124 ~LP~~vd~--~~i~A~~~nGvL~I~lpK~~~~~~r~I~I 160 (161)
T 4eld_A 124 KLPATVKE--ENASAKFENGVLSVILPKAESSIKKGINI 160 (161)
T ss_dssp ECSSCBCG--GGCEEEEETTEEEEEEEBCGGGSCCCCCC
T ss_pred ECCCCccc--ccEEEEEECCEEEEEEEcCCCCCCcEeec
Confidence 99999988 99999999999999999998777654444
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.93 E-value=7.2e-26 Score=170.23 Aligned_cols=96 Identities=20% Similarity=0.205 Sum_probs=84.5
Q ss_pred ccCceeeEEECCCeEEEEEecCCCCCCCceEEEEEeCC-CEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEE
Q 039847 29 FLNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDG-KLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDIS 107 (172)
Q Consensus 29 ~~~p~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~-~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~ 107 (172)
...|++||+|++++|+|.++|| |++++||+|++ ++ +.|+|+|++ +.+. +.+|+++|| ++ + |.
T Consensus 22 ~~~P~~di~e~~~~~~v~~~lP-G~~~edi~V~v--~~~~~L~I~g~~-----~~~~---~~~~~~~Er-~~---~--f~ 84 (123)
T 3aab_A 22 LVYPPVDMYEEGGYLVVVADLA-GFNKEKIKARV--SGQNELIIEAER-----EITE---PGVKYLTQR-PK---Y--VR 84 (123)
T ss_dssp HHCSCEEEEEETTEEEEEEECC-SCCGGGCEEEE--ETTTEEEEEEEC-----CCCC---CSCEEEECS-CS---E--EE
T ss_pred cCCCcEEEEEcCCEEEEEEECC-CCCHHHEEEEE--eCCCEEEEEEEE-----eccC---CCeEEEEEE-eE---E--EE
Confidence 3458999999999999999999 99999999999 55 899999998 3322 568999999 33 3 99
Q ss_pred EEEECCCCCcCCCCcE-EEEEeCCEEEEEEeccCCCC
Q 039847 108 KSFNLPEGVIVKPNCF-KASVEDGVLNVIFTKLKSKK 143 (172)
Q Consensus 108 R~f~LP~~vd~~~d~I-~A~~~nGVL~V~vPK~~~~k 143 (172)
|+|.||.+++. ++| +|+|+||||+|++||.+..+
T Consensus 85 R~~~LP~~vd~--~~i~~A~~~~GvL~I~lPK~~~~~ 119 (123)
T 3aab_A 85 KVIRLPYNVAK--DAEISGKYENGVLTIRIPIAGTSV 119 (123)
T ss_dssp EEEECSSEECT--TCCCEEEEETTEEEEEEEGGGEEC
T ss_pred EEEECCCCcCc--chhCeeEEcCCEEEEEEEcCCCCc
Confidence 99999999988 999 99999999999999997654
No 6
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.92 E-value=6.1e-25 Score=160.60 Aligned_cols=95 Identities=14% Similarity=0.196 Sum_probs=80.3
Q ss_pred eeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEEEC
Q 039847 33 NGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNL 112 (172)
Q Consensus 33 ~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f~L 112 (172)
.+||+|++++|+|.++|| ||+++||+|++ +++.|+|+|++.. +. ++..|+++ . |+|+|.|
T Consensus 3 ~vdi~e~~~~~~v~~dlP-G~~~edI~V~v--~~~~L~I~g~~~~-----~~--~~~~~~~~--------e--F~R~~~L 62 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVK-HFSPEEISVKV--VGDHVEVHARHEE-----RP--DEHGFIAR--------E--FHRRYRL 62 (101)
T ss_dssp CCCCCCCSSCEEEEEECT-TSCGGGEEEEE--ETTEEEEEEEEEE-----CS--STTCCEEE--------E--EEEEEEC
T ss_pred cEEEEEeCCEEEEEEECC-CCcHHHeEEEE--ECCEEEEEEEEec-----cc--CCCCEEEE--------E--EEEEEEC
Confidence 489999999999999999 99999999999 5789999999932 11 22345432 4 9999999
Q ss_pred CCCCcCCCCcEEEEE-eCCEEEEEEeccCCCCcceeee
Q 039847 113 PEGVIVKPNCFKASV-EDGVLNVIFTKLKSKKKIMSKV 149 (172)
Q Consensus 113 P~~vd~~~d~I~A~~-~nGVL~V~vPK~~~~k~~~~~I 149 (172)
|.+++. ++|+|+| +||||+|++||.+..+++.++|
T Consensus 63 P~~vd~--~~i~A~~s~nGvL~I~lPK~~~~~~~~~~i 98 (101)
T 2wj5_A 63 PPGVDP--AAVTSALSPEGVLSIQATPASAQASLPSPP 98 (101)
T ss_dssp CTTBCT--TCCEEEECTTSEEEEEECBCCCCCSSCC--
T ss_pred CCCcCh--hHCEEEECCCCEEEEEEECCCcCCCCCCcc
Confidence 999988 9999999 8999999999999988887776
No 7
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.91 E-value=6.3e-24 Score=156.58 Aligned_cols=96 Identities=14% Similarity=0.195 Sum_probs=79.3
Q ss_pred eeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEEEC
Q 039847 33 NGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNL 112 (172)
Q Consensus 33 ~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f~L 112 (172)
-.||+|++++|+|.++|| ||+++||+|++ +++.|+|+|++. ... ....|++ | . |.|+|.|
T Consensus 4 ~~~i~e~~~~~~v~~dlP-G~~~edi~V~v--~~~~L~I~g~~~-----~~~--~~~~~~~--~------e--F~R~~~L 63 (106)
T 3l1e_A 4 ISEVRSDRDKFVIFLDVK-HFSPEDLTVKV--QEDFVEIHGKHN-----ERQ--DDHGYIS--R------E--FHRRYRL 63 (106)
T ss_dssp SEEEEECSSEEEEEEECT-TSCGGGEEEEE--ETTEEEEEEEEE-----EEE--TTTEEEE--E------E--EEEEEEC
T ss_pred ceEEEEcCCEEEEEEECC-CCChHHEEEEE--ECCEEEEEEEEc-----ccc--CCCCEEE--E------E--EEEEEEC
Confidence 489999999999999999 99999999999 678999999982 111 1234542 2 5 9999999
Q ss_pred CCCCcCCCCcEEEEE-eCCEEEEEEeccCCCC---cceeeec
Q 039847 113 PEGVIVKPNCFKASV-EDGVLNVIFTKLKSKK---KIMSKVL 150 (172)
Q Consensus 113 P~~vd~~~d~I~A~~-~nGVL~V~vPK~~~~k---~~~~~I~ 150 (172)
|.+++. ++|+|+| +||||+|++||.++.. ++.++|+
T Consensus 64 P~~vd~--~~i~A~~s~~GvL~I~~PK~~~~~~~~~~~r~I~ 103 (106)
T 3l1e_A 64 PSNVDQ--SALSCSLSADGMLTFSGPKIPSGVDAGHSERAIP 103 (106)
T ss_dssp CTTBCT--TSCEEEECTTSEEEEEEEBCCCCTTTTSSSCCCC
T ss_pred CCCcCh--hHcEEEECCCCEEEEEEEccCcccccCCCCeEee
Confidence 999988 9999999 8999999999998752 3555554
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.89 E-value=4.7e-23 Score=146.26 Aligned_cols=83 Identities=17% Similarity=0.227 Sum_probs=67.7
Q ss_pred EEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEEECCCC
Q 039847 36 WDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEG 115 (172)
Q Consensus 36 i~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f~LP~~ 115 (172)
+.|++++|+|.++|| ||+++||+|++ +++.|+|+|++ +.+..+ ..| .+| + |.|+|.||++
T Consensus 2 ~~E~~~~~~v~~dlP-G~~~edi~V~v--~~~~L~I~g~~-----~~~~~~--~~~------~~~--~--F~R~~~LP~~ 61 (85)
T 3q9p_A 2 GSHTADRWRVSLDVN-HFAPDELTVKT--KDGVVEITGKH-----AARQDE--HGY------ISR--C--FTRKYTLPPG 61 (85)
T ss_dssp -CCCCCEEEEEEECT-TTCCSEEEEEE--ETTEEEEEEEE-----C---------C------CCE--E--EEEEEECCTT
T ss_pred ccCcCCEEEEEEECC-CCChHHEEEEE--ECCEEEEEEEE-----ccccCC--CCE------EEE--E--EEEEEECCCC
Confidence 358999999999999 99999999999 67899999999 222111 112 334 6 9999999999
Q ss_pred CcCCCCcEEEEEe-CCEEEEEEeccC
Q 039847 116 VIVKPNCFKASVE-DGVLNVIFTKLK 140 (172)
Q Consensus 116 vd~~~d~I~A~~~-nGVL~V~vPK~~ 140 (172)
|+. ++|+|+|. ||||+|++||.+
T Consensus 62 vd~--~~i~A~~~~~GvL~I~lPK~k 85 (85)
T 3q9p_A 62 VDP--TQVSSSLSPEGTLTVEAPMPK 85 (85)
T ss_dssp CCG--GGCEEEECTTSEEEEEEECCC
T ss_pred cCh--HHcEEEECCCCEEEEEEEcCC
Confidence 988 99999998 999999999963
No 9
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.88 E-value=1.4e-22 Score=145.01 Aligned_cols=87 Identities=16% Similarity=0.219 Sum_probs=66.7
Q ss_pred EECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEEECCCCC
Q 039847 37 DDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEGV 116 (172)
Q Consensus 37 ~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f~LP~~v 116 (172)
.++++.|+|.++|| ||+++||+|++ +++.|+|+|++. .+ .++..|+++ . |+|+|.||.+|
T Consensus 2 k~~~~~~~v~~dlP-G~~~edi~V~v--~~~~L~I~g~~~-----~~--~~~~~~~~~--------e--f~R~~~LP~~v 61 (90)
T 2y1y_A 2 AMEKDRFSVNLDVK-HFSPEELKVKV--LGDVIEVHGKHE-----ER--QDEHGFISR--------E--FHRKYRIPADV 61 (90)
T ss_dssp ----CCEEEEEECT-TSCGGGEEEEE--ETTEEEEEEEEE-----EE--ECSSSEEEE--------E--EEEEEECCTTB
T ss_pred CcCCCEEEEEEECC-CCcHHHeEEEE--ECCEEEEEEEEe-----cc--cCCCCEEEE--------E--EEEEEECCCCc
Confidence 36889999999999 99999999999 578999999982 21 123456532 4 99999999999
Q ss_pred cCCCCcEEEEE-eCCEEEEEEeccCCCCcc
Q 039847 117 IVKPNCFKASV-EDGVLNVIFTKLKSKKKI 145 (172)
Q Consensus 117 d~~~d~I~A~~-~nGVL~V~vPK~~~~k~~ 145 (172)
+. ++|+|+| +||||+|++||.+.++|+
T Consensus 62 d~--~~i~A~~~~~GvL~I~~pK~~~~~p~ 89 (90)
T 2y1y_A 62 DP--LTITSSMSSDGVLTVNGPRKQVSGPE 89 (90)
T ss_dssp CG--GGCEEEECTTSEEEEEECBC------
T ss_pred Ch--hHcEEEECCCCEEEEEEEcCCCCCCC
Confidence 88 9999999 899999999999887765
No 10
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.86 E-value=6.5e-22 Score=158.02 Aligned_cols=89 Identities=17% Similarity=0.204 Sum_probs=70.2
Q ss_pred eeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEEEC
Q 039847 33 NGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNL 112 (172)
Q Consensus 33 ~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f~L 112 (172)
.+||+|+++.|+|.++|| ||++|||+|++ +++.|+|+|++ +.+. ++..|++ | . |+|+|.|
T Consensus 65 ~~dv~e~~d~~~v~~dlP-G~~~edI~V~v--~~~~L~I~g~~-----~~~~--~~~~~~~--r------e--F~R~~~L 124 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVK-HFSPEELKVKV--LGDVIEVHGKH-----EERQ--DEHGFIS--R------E--FHRKYRI 124 (175)
T ss_dssp ----CCCCSEEEEEECCS-SCCGGGEEEEE--ETTEEEEEEEE-----EEEE--ETTEEEE--E------E--EEEEEEC
T ss_pred ceEEEEcCCeEEEEEECC-CCChHHEEEEE--ECCEEEEEEEE-----cccc--cCCceEE--E------E--EEEEEEC
Confidence 479999999999999999 99999999999 57899999998 2221 2334543 2 4 9999999
Q ss_pred CCCCcCCCCcEEEEE-eCCEEEEEEeccCCCC
Q 039847 113 PEGVIVKPNCFKASV-EDGVLNVIFTKLKSKK 143 (172)
Q Consensus 113 P~~vd~~~d~I~A~~-~nGVL~V~vPK~~~~k 143 (172)
|++|+. ++|+|+| +||||+|++||.+..+
T Consensus 125 P~~Vd~--~~i~A~~s~dGvL~I~lPK~~~~~ 154 (175)
T 2klr_A 125 PADVDP--LTITSSLSSDGVLTVNGPRKQVSG 154 (175)
T ss_dssp TTTCCT--TTCEEEECTTSCEEEEEECC----
T ss_pred CCCcCh--hHeEEEEcCCCEEEEEEECCCCCC
Confidence 999988 9999999 8999999999987644
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.84 E-value=5.3e-21 Score=165.00 Aligned_cols=91 Identities=20% Similarity=0.203 Sum_probs=79.4
Q ss_pred cCceeeEEECCC----eEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeee
Q 039847 30 LNINGEWDDAGD----NLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKID 105 (172)
Q Consensus 30 ~~p~vDi~Et~d----~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~ 105 (172)
+.|++|++|+++ +|+|.++|| ||+||||+|++ +++.|+|+|++ +.+.+ . +| .+| +
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlP-G~~~edI~V~v--~~~~L~I~ge~-----~~~~e--~------~r-~~g--~-- 155 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVK-NFKAEEITIKA--DKNKLVVRAQK-----SVACG--D------AA-MSE--S-- 155 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECT-TCCTTTEEEEE--ETTEEEEEECC-----BSSTT--C------CC-BCC--C--
T ss_pred CCCccceEEcCCCCceEEEEEEECC-CCchHHeEEEE--ECCEEEEEEEE-----eccCC--C------CE-EEE--E--
Confidence 568999999999 999999999 99999999999 67899999998 22221 1 15 677 8
Q ss_pred EEEEEECCCCCcCCCCcEEEEEe-CCEEEEEEeccCCCC
Q 039847 106 ISKSFNLPEGVIVKPNCFKASVE-DGVLNVIFTKLKSKK 143 (172)
Q Consensus 106 F~R~f~LP~~vd~~~d~I~A~~~-nGVL~V~vPK~~~~k 143 (172)
|.|+|.||++|+. ++|+|+|+ ||||+|++||.++..
T Consensus 156 F~R~~~LP~~Vd~--e~i~A~~~~nGVL~I~lPK~~~~~ 192 (314)
T 2bol_A 156 VGRSIPLPPSVDR--NHIQATITTDDVLVIEAPVNEPNY 192 (314)
T ss_dssp EEEEEECCTTBCG--GGCEEEECSSSEEEEEEEBSSCCT
T ss_pred EEEEEECCCCccc--cccEEEEeCCCEEEEEEeccCccc
Confidence 9999999999988 99999999 999999999997654
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.84 E-value=4.2e-21 Score=165.61 Aligned_cols=90 Identities=20% Similarity=0.197 Sum_probs=70.5
Q ss_pred ceeeEEECC---CeEEEEEec-CCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEE
Q 039847 32 INGEWDDAG---DNLMFKATL-PTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDIS 107 (172)
Q Consensus 32 p~vDi~Et~---d~~vv~adL-P~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~ 107 (172)
..+++.+++ +.|.|.|+| | |++||||+|++ +++.|+|+|++ +.+++ .|+++|| ++| + |+
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldP-G~~~edi~V~v--~~~~LtI~ge~-----~~~~~----~~~~~Er-~~g--~--F~ 283 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDP-HFAPKDVKVWA--KGNKVYVHGVT-----GKEEK----TENASHS-EHR--E--FY 283 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCT-TCCGGGEEEEE--SSSEEEEEEEE-----C-----------------CE--E--EE
T ss_pred CCCcEEEecCCCcEEEEEEEcCC-CCChHHeEEEE--ECCEEEEEEEE-----eccCC----ceEEEEE-eee--E--EE
Confidence 447777665 589999999 9 99999999999 78899999999 33221 5789999 899 8 99
Q ss_pred EEEECCCCCcCCCCcEEEEEeCCEEEEEEeccC
Q 039847 108 KSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLK 140 (172)
Q Consensus 108 R~f~LP~~vd~~~d~I~A~~~nGVL~V~vPK~~ 140 (172)
|+|.||++|+. ++|+|+|+||||+|++||.+
T Consensus 284 R~~~LP~~vd~--~~i~A~~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 284 KAFVTPEVVDA--SKTQAEIVDGLMVVEAPLFK 314 (314)
T ss_dssp EEEECSSEECG--GGCEEEEETTEEEEEEEEEC
T ss_pred EEEECCCCcCh--HHeEEEEeCCEEEEEEecCC
Confidence 99999999988 99999999999999999963
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.06 E-value=1.1e-09 Score=80.13 Aligned_cols=82 Identities=12% Similarity=0.166 Sum_probs=71.0
Q ss_pred cCceeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEE
Q 039847 30 LNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKS 109 (172)
Q Consensus 30 ~~p~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~ 109 (172)
..+++||+++.+.+.|.+.+| |+++++++|++ ..+.|+|++.. .. + . . |...
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~-~v~~~~v~v~~--~~~~l~v~~~~-----~~-----~-----------~--~--y~~~ 59 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIK-NVQKNDVNVEF--SEKELSALVKL-----PS-----G-----------E--D--YNLK 59 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCC-SCCGGGEEEEC--SSSCEEEEEEC-----TT-----S-----------S--E--EEEE
T ss_pred CCCCccEEeCCCEEEEEEEeC-CCCHHHCEEEE--EcCEEEEEEEe-----CC-----C-----------c--E--EEEE
Confidence 347899999999999999999 99999999999 66789999875 10 0 1 3 7788
Q ss_pred EECCCCCcCCCCcEEEEEeCCEEEEEEeccCC
Q 039847 110 FNLPEGVIVKPNCFKASVEDGVLNVIFTKLKS 141 (172)
Q Consensus 110 f~LP~~vd~~~d~I~A~~~nGVL~V~vPK~~~ 141 (172)
+.|+..|+. +..++++.+|.|.|+|+|.+.
T Consensus 60 ~~L~~~I~~--e~s~~~~~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 60 LELLHPIIP--EQSTFKVLSTKIEIKLKKPEA 89 (114)
T ss_dssp ECBSSCCCG--GGEEEEECSSSEEEEEECSSC
T ss_pred eeCCCcCCc--cccEEEEECCEEEEEEEcCCC
Confidence 999999987 999999999999999999864
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.04 E-value=1e-09 Score=77.02 Aligned_cols=81 Identities=11% Similarity=0.111 Sum_probs=70.2
Q ss_pred CceeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEE
Q 039847 31 NINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSF 110 (172)
Q Consensus 31 ~p~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f 110 (172)
.++++|+++.+...|.+.+| |+.++++.|++ ..+.|+|++.. .. + . . |...+
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~-~v~~~~v~v~~--~~~~l~v~~~~-----~~-----~-----------~--~--y~~~~ 53 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAK-GIPKQNVNIDF--GEQILSVVIEV-----PG-----E-----------D--A--YYLQP 53 (92)
T ss_dssp CSEEEEEEETTEEEEEEECC-SCCGGGEEEEE--CSSBEEEEECC-----TT-----S-----------C--C--EEECC
T ss_pred CccccEEeCCCEEEEEEEEC-CCChHHeEEEE--ECCEEEEEEEc-----CC-----C-----------c--E--EEEee
Confidence 47899999999999999999 99999999999 56789999865 10 0 1 3 77788
Q ss_pred ECCCCCcCCCCcEEEEEeCCEEEEEEeccCC
Q 039847 111 NLPEGVIVKPNCFKASVEDGVLNVIFTKLKS 141 (172)
Q Consensus 111 ~LP~~vd~~~d~I~A~~~nGVL~V~vPK~~~ 141 (172)
.|+..|+. ++.++++.+|.|.|+|+|.+.
T Consensus 54 ~L~~~I~~--~~s~~~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 54 RLFGKIIP--DKCKYEVLSTKIEICLAKADI 82 (92)
T ss_dssp BBSSCBCG--GGCEEEECSSCEEEEEEBSSS
T ss_pred EcCCccCc--hhEEEEEECCEEEEEEEcCCC
Confidence 99999977 999999999999999999864
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.90 E-value=2.6e-05 Score=59.71 Aligned_cols=76 Identities=13% Similarity=0.124 Sum_probs=62.9
Q ss_pred CceeeEEECCCeEEEEEecCCCCC--CCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEE
Q 039847 31 NINGEWDDAGDNLMFKATLPTGTK--MEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISK 108 (172)
Q Consensus 31 ~p~vDi~Et~d~~vv~adLP~Gv~--kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R 108 (172)
+|...+..+++..+|.+.+| ..+ ..++++.| ++..+..... . |.-
T Consensus 3 TP~F~itQd~e~viV~Ik~P-~~~~~~sdiei~v--~~~~F~F~~~----------------------------P--YyL 49 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFIS-NIRFSAVGLEIII--QENMIIFHLS----------------------------P--YYL 49 (134)
T ss_dssp CSEEEEEECSSEEEEEEECC-SSCCCSSSCCCEE--CSSSEEECSS----------------------------S--SCE
T ss_pred CceEEEEECCCEEEEEEEcC-ccccCccccEEEE--eCCEEEEecC----------------------------C--eEE
Confidence 58899999999999999999 998 89999999 6766643311 2 556
Q ss_pred EEECCCCC-cCCCCcEEEEE--eCCEEEEEEeccCC
Q 039847 109 SFNLPEGV-IVKPNCFKASV--EDGVLNVIFTKLKS 141 (172)
Q Consensus 109 ~f~LP~~v-d~~~d~I~A~~--~nGVL~V~vPK~~~ 141 (172)
++.||..| +. +..+|+| +.|.|+|+|||...
T Consensus 50 RL~LP~~V~e~--~~~kA~YD~d~~~~~VtLpK~~~ 83 (134)
T 2k8q_A 50 RLRFPHELIDD--ERSTAQYDSKDECINVKVAKLNK 83 (134)
T ss_dssp EECCSSCEECC--SSCEEEEETTTTEEEEEEEESST
T ss_pred EecCCCeeecC--CCcceeEeccCCEEEEEEeCCCC
Confidence 79999998 55 8899999 48999999999854
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.81 E-value=0.00029 Score=52.50 Aligned_cols=81 Identities=14% Similarity=0.186 Sum_probs=64.5
Q ss_pred cccCceeeEEECCCeEEEEEecCCCCC--CCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeee
Q 039847 28 EFLNINGEWDDAGDNLMFKATLPTGTK--MEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKID 105 (172)
Q Consensus 28 ~~~~p~vDi~Et~d~~vv~adLP~Gv~--kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~ 105 (172)
...+|...+..+++..+|.+-+| -++ ..++++.+ +|+.+..... .
T Consensus 14 ~~iTP~F~itQDdefv~I~I~~p-~ir~~a~~~ei~v--d~~~F~F~~~----------------------------P-- 60 (115)
T 3eud_A 14 KMITPRFSITQDEEFIFLKIFIS-NIRFSAVGLEIII--QENMIIFHLS----------------------------P-- 60 (115)
T ss_dssp CCBCCCEEEEECSSEEEEEEECC-SCCCCSSSCEEEE--ETTEEEEEET----------------------------T--
T ss_pred CEeCCcEEEEECCCEEEEEEEcC-ceecccCccEEEE--eCCEEEEecC----------------------------C--
Confidence 34568999999999999999999 876 77999999 6776654422 2
Q ss_pred EEEEEECCCCCcCCCCcEEEEE--eCCEEEEEEeccCCC
Q 039847 106 ISKSFNLPEGVIVKPNCFKASV--EDGVLNVIFTKLKSK 142 (172)
Q Consensus 106 F~R~f~LP~~vd~~~d~I~A~~--~nGVL~V~vPK~~~~ 142 (172)
|.-++.||..+- +.+.-+|+| ++|.++|++||..+.
T Consensus 61 YyLRL~lP~~vv-ed~~~~A~YD~d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 61 YYLRLRFPHELI-DDERSTAQYDSKDECINVKVAKLNKN 98 (115)
T ss_dssp EEEEEECSSCEE-CSTTCEEEEETTTTEEEEEEEESSTT
T ss_pred eEEEEecCccee-cCCCcceEEeCCCcEEEEEEcCCcCC
Confidence 556799999884 336789999 489999999999653
No 17
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.68 E-value=0.00083 Score=49.91 Aligned_cols=81 Identities=17% Similarity=0.169 Sum_probs=66.3
Q ss_pred CceeeEEECCCeEEEEEecCCCC---CCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEE
Q 039847 31 NINGEWDDAGDNLMFKATLPTGT---KMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDIS 107 (172)
Q Consensus 31 ~p~vDi~Et~d~~vv~adLP~Gv---~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~ 107 (172)
.++++|+++.+...|.+.+| |+ .++++.|++ ..+.|.++.... . +. . |.
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~-~~~~~~~~~v~V~~--~~~~l~v~~~~~-----~-----~~-------------~--y~ 71 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLT-GVHQVPTENVQVHF--TERSFDLLVKNL-----N-----GK-------------S--YS 71 (127)
T ss_dssp CCSCEEEEETTEEEEEEECT-TTTTSCTTSEEEEE--CSSEEEEEECSC-----S-----SS-------------C--EE
T ss_pred ccEEEEEcCCCEEEEEEEeC-CCCcCCccccEEEE--EcCEEEEEEEcC-----C-----CC-------------c--EE
Confidence 36899999999999999999 99 899999999 667899987530 0 10 2 55
Q ss_pred EEEE-CCCCCcCCCCcEEEEEeCCEEEEEEeccCC
Q 039847 108 KSFN-LPEGVIVKPNCFKASVEDGVLNVIFTKLKS 141 (172)
Q Consensus 108 R~f~-LP~~vd~~~d~I~A~~~nGVL~V~vPK~~~ 141 (172)
-.+. |-..|+. ++-+.++..+-+.|+|-|.+.
T Consensus 72 ~~~~~L~~~I~~--e~S~~~v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 72 MIVNNLLKPISV--EGSSKKVKTDTVLILCRKKVE 104 (127)
T ss_dssp EEEECBSSCCCT--TTCEEEEETTEEEEEEECSSS
T ss_pred EEhHHhcCccCc--ccCEEEEeCCEEEEEEEECCC
Confidence 5674 8888877 888999999999999999874
No 18
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.53 E-value=0.00085 Score=50.84 Aligned_cols=93 Identities=9% Similarity=0.043 Sum_probs=68.9
Q ss_pred cCceeeEEEC-CCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCC-CeeeEE
Q 039847 30 LNINGEWDDA-GDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGD-GKIDIS 107 (172)
Q Consensus 30 ~~p~vDi~Et-~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~-~~~~F~ 107 (172)
..++.||+++ .+...|.+.++ |+.++++.|++ ..+.|+++... ..... -..|- .+|. .. |.
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k-~v~~~~v~V~f--~~~~l~v~~~~-----~~~~~---l~~~~----a~g~~~~--y~ 80 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVK-EICRDTSRVLF--REQDFTLIFQT-----RDGNF---LRLHP----GCGPHTT--FR 80 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECC-SBCTTSCEEEE--CSSEEEEEECB-----CCHHH---HHHST----TCCTTSC--EE
T ss_pred cCCCeEEEcCCCCEEEEEEEeC-CCCcccCEEEE--ECCEEEEEEEc-----CCCcc---ccccc----ccCccee--EE
Confidence 4588999999 99999999999 99999999999 66789998764 11000 00000 0010 02 66
Q ss_pred EEEECCCCCcCCCCcEEEEEeCCEEEEEEeccCC
Q 039847 108 KSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLKS 141 (172)
Q Consensus 108 R~f~LP~~vd~~~d~I~A~~~nGVL~V~vPK~~~ 141 (172)
-.+.|-..|+. ++-+.++..+-+.|+|-|++.
T Consensus 81 ~~~~L~~~I~p--e~S~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 81 WQVKLRNLIEP--EQCTFCFTASRIDICLRKRQS 112 (134)
T ss_dssp EEEEBSSCEEE--EEEEEEECSSEEEEEEEESSS
T ss_pred EeccccccCCc--hhCEEEEeCCEEEEEEEECCC
Confidence 67789888877 888999999999999999864
No 19
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.44 E-value=0.0031 Score=46.55 Aligned_cols=83 Identities=13% Similarity=0.172 Sum_probs=65.0
Q ss_pred cCceeeEEECCCeEEEEEecCCCC-CCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEE
Q 039847 30 LNINGEWDDAGDNLMFKATLPTGT-KMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISK 108 (172)
Q Consensus 30 ~~p~vDi~Et~d~~vv~adLP~Gv-~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R 108 (172)
..|++.|.++.+...|++.||.|+ +++|+.|.+ ..+.|.++... . .+.. +.-
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i--~~~~l~v~~~~-----~-----~~~~---------------~~~ 70 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVAL--SSSSIRVAMLE-----E-----NGER---------------VLM 70 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEE--CSSEEEEEEEC-----S-----SSEE---------------EEE
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEE--EcCEEEEEEEc-----c-----CCCc---------------eEE
Confidence 347899999999999999999777 899999999 67789988653 0 0111 223
Q ss_pred EEECCCCCcCCCCcEEEEEeCCE-EEEEEeccCC
Q 039847 109 SFNLPEGVIVKPNCFKASVEDGV-LNVIFTKLKS 141 (172)
Q Consensus 109 ~f~LP~~vd~~~d~I~A~~~nGV-L~V~vPK~~~ 141 (172)
...|...|+. +.-..++++|- |.|+|-|.+.
T Consensus 71 ~~~L~~~I~~--e~S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 71 EGKLTHKINT--ESSLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp EEEBSSCBCT--TTCEEEECTTSEEEEEECBSSS
T ss_pred cccccCcCCC--cCCEEEEeCCCEEEEEEEECCC
Confidence 4568888877 99999999885 9999999853
No 20
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.31 E-value=0.0018 Score=48.00 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=63.7
Q ss_pred ceeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEEE
Q 039847 32 INGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFN 111 (172)
Q Consensus 32 p~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f~ 111 (172)
|+++|+++.+...|++.+| +. +++.|.+ ..+.|++++.. .. .+. . |.-.+.
T Consensus 4 ~~~~W~Qt~~~V~ltI~~~-~~--~~~~V~~--~~~~l~~~~~~-----~~----~~~-------------~--y~~~l~ 54 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIEFCVE-DS--KDVNVNF--EKSKLTFSCLG-----GS----DNF-------------K--HLNEID 54 (125)
T ss_dssp CCEEEEECSSEEEEEECCT-TE--EEEEEEE--ETTEEEEEEEE-----TT----TTE-------------E--EEEEEE
T ss_pred CceeEEeCCCEEEEEEEec-CC--CceEEEE--ECCEEEEEEEe-----CC----CCc-------------e--EEEEEE
Confidence 3899999999999999999 96 6999999 56789998764 10 010 2 556778
Q ss_pred CCCCCcCCCCcEEEEEeCCEEEEEEeccCC
Q 039847 112 LPEGVIVKPNCFKASVEDGVLNVIFTKLKS 141 (172)
Q Consensus 112 LP~~vd~~~d~I~A~~~nGVL~V~vPK~~~ 141 (172)
|-..|+. ++-+.++.+.-+.|+|.|+++
T Consensus 55 L~~~I~~--e~S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 55 LFHCIDP--NDSKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp BSSCEEE--EEEEEEECSSCEEEEEEESST
T ss_pred ccceecc--ccCEEEECCCEEEEEEEECCC
Confidence 8888877 999999999999999999863
No 21
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=97.21 E-value=0.0012 Score=57.52 Aligned_cols=73 Identities=18% Similarity=0.209 Sum_probs=57.0
Q ss_pred CceeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEE
Q 039847 31 NINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSF 110 (172)
Q Consensus 31 ~p~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f 110 (172)
..++.+... .|.+++.|| |++|++|++.- .|.-|+|+. | . |.|.+
T Consensus 297 ~~~~~i~~~--~~~~~l~lP-~~~~~~~~l~~--~gdeL~v~~--------------------------g--~--~rR~i 341 (374)
T 3igf_A 297 PKPITIDTH--NRQVRLFLP-GFDKKQVKLTQ--YGPEVTVEA--------------------------G--D--QRRNI 341 (374)
T ss_dssp CCSEEEETT--TTEEEEECT-TCCGGGCEEEE--ETTEEEEEE--------------------------T--T--EEEEE
T ss_pred CCCEEEEec--cEEEEEECC-CCCHHHeEEEE--ECCeEEEEE--------------------------C--C--Eeecc
Confidence 345666554 899999999 99999999977 566777763 3 4 99999
Q ss_pred ECCCCCcCCCCcEEEEEeCCEEEEEEecc
Q 039847 111 NLPEGVIVKPNCFKASVEDGVLNVIFTKL 139 (172)
Q Consensus 111 ~LP~~vd~~~d~I~A~~~nGVL~V~vPK~ 139 (172)
.||....- -.-..|+|+||.|+|++-..
T Consensus 342 ~LP~~L~~-~~v~~A~~~~~~L~i~~~~~ 369 (374)
T 3igf_A 342 FLPPALSG-RPITGAKFQNNYLIISFLEH 369 (374)
T ss_dssp ECCTTTTT-CCEEEEEEETTEEEEEECCC
T ss_pred cCCHHHcC-CCccccEEECCEEEEEEehh
Confidence 99986542 24589999999999997543
No 22
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.19 E-value=0.0029 Score=46.69 Aligned_cols=80 Identities=18% Similarity=0.137 Sum_probs=62.3
Q ss_pred cCceeeEEECCCeEEEEEecCCC--CCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEE
Q 039847 30 LNINGEWDDAGDNLMFKATLPTG--TKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDIS 107 (172)
Q Consensus 30 ~~p~vDi~Et~d~~vv~adLP~G--v~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~ 107 (172)
..+++.|.++.+...|++.||.| ++++|+.|.+ ..+.|.+...- . .+ - |
T Consensus 15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i--~~~~l~v~~kg------~-------~~-----------~--~- 65 (121)
T 3qor_A 15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDI--QRRHLRVGLKG------Q-------PA-----------I--I- 65 (121)
T ss_dssp BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEE--ETTEEEEEETT------S-------CC-----------S--E-
T ss_pred cCCCEEEEEccceEEEEEECCCCCcccccceEEEE--EcCEEEEEEcC------c-------ce-----------E--E-
Confidence 34789999999999999999955 7999999999 45678876431 0 00 1 2
Q ss_pred EEEECCCCCcCCCCcEEEEEeCC-EEEEEEeccCC
Q 039847 108 KSFNLPEGVIVKPNCFKASVEDG-VLNVIFTKLKS 141 (172)
Q Consensus 108 R~f~LP~~vd~~~d~I~A~~~nG-VL~V~vPK~~~ 141 (172)
...|...|+. +.-..++++| .|.|+|-|...
T Consensus 66 -~g~L~~~I~~--deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 66 -DGELYNEVKV--EESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp -EEEBSSCBCG--GGCEEEEETTTEEEEEEEBSSS
T ss_pred -eccccccccc--cccEEEEcCCCEEEEEEEECCC
Confidence 3357777877 8899999998 99999999854
No 23
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.97 E-value=0.0057 Score=45.58 Aligned_cols=78 Identities=18% Similarity=0.192 Sum_probs=59.3
Q ss_pred CceeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEE
Q 039847 31 NINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSF 110 (172)
Q Consensus 31 ~p~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f 110 (172)
.|++.|+++.+...|.+.||.|++++++.|.+ ..+.|.++..- ..+ | ..
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i--~~~~l~v~~~g-------------~~~--------------~--~~ 52 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRM--VGKKICVKNQG-------------EIV--------------I--DG 52 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEE--ETTEEEEEETT-------------EEE--------------E--EE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEE--ECCEEEEEECC-------------Eee--------------E--cc
Confidence 47899999999999999996589999999999 56788887521 011 1 23
Q ss_pred ECCCCCcCCCCcEEEEEeCCEEEEEEeccCC
Q 039847 111 NLPEGVIVKPNCFKASVEDGVLNVIFTKLKS 141 (172)
Q Consensus 111 ~LP~~vd~~~d~I~A~~~nGVL~V~vPK~~~ 141 (172)
.|...|+. +.-..++++|-|.|+|-|.+.
T Consensus 53 ~L~~~I~~--e~S~w~i~~~kv~i~L~K~~~ 81 (131)
T 2o30_A 53 ELLHEVDV--SSLWWVINGDVVDVNVTKKRN 81 (131)
T ss_dssp EBSSCEEE--EEEEEEEETTEEEEEEEESSC
T ss_pred cccccccc--ccCEEEEeCCEEEEEEEECCC
Confidence 56677877 889999999999999999843
No 24
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=96.95 E-value=0.01 Score=45.81 Aligned_cols=79 Identities=16% Similarity=0.245 Sum_probs=63.1
Q ss_pred cCceeeEEECCCeEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEE
Q 039847 30 LNINGEWDDAGDNLMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKS 109 (172)
Q Consensus 30 ~~p~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~ 109 (172)
..+.+.|.++.+...|++.||.|++++|+.|.+ ..+.|+++..- ..+ | .
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i--~~~~L~v~~kg-------------~~~--------------l--~ 60 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGL--QSRHVALAVGG-------------REI--------------L--K 60 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEE--CSSEEEEEETT-------------EEE--------------E--E
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEE--ecCEEEEEECC-------------EEE--------------E--e
Confidence 347899999999999999998789999999999 66788887421 011 1 2
Q ss_pred EECCCCCcCCCCcEEEEEeCCE-EEEEEeccCC
Q 039847 110 FNLPEGVIVKPNCFKASVEDGV-LNVIFTKLKS 141 (172)
Q Consensus 110 f~LP~~vd~~~d~I~A~~~nGV-L~V~vPK~~~ 141 (172)
..|...|+. +.-..+++++- |.|+|-|...
T Consensus 61 g~L~~~I~~--eeS~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 61 GKLFDSTIA--DEGTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp EEBSSCBCG--GGCEEEEECCCEEEEEEEBSSC
T ss_pred eccccccCc--cccEEEEcCCcEEEEEEEEcCC
Confidence 457777877 99999999885 9999999864
No 25
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=96.92 E-value=0.0039 Score=47.90 Aligned_cols=78 Identities=14% Similarity=0.285 Sum_probs=62.1
Q ss_pred CceeeEEECCCeEEEEEecCCCCCCCceEEEEEeC-CCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEE
Q 039847 31 NINGEWDDAGDNLMFKATLPTGTKMEELKIESTED-GKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKS 109 (172)
Q Consensus 31 ~p~vDi~Et~d~~vv~adLP~Gv~kedI~V~v~~d-~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~ 109 (172)
.|+++|+++.+...|++.+| ++ ++++|++ . .+.|++++.. . .+. . |.-.
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~-~~--~~v~V~~--~~~~~l~~~~~~-----~-----~~~-------------~--y~~~ 53 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALP-DA--KDISVKC--EPQGLFSFSALG-----A-----QGE-------------R--FEFS 53 (150)
T ss_dssp CCCEEEEECSSEEEEEECCS-SE--EEEEECC--CTTEEEEEEEET-----T-----TTE-------------E--EEEE
T ss_pred CCcEEEEeCCCEEEEEEEeC-CC--CceEEEE--ecCCEEEEEEEc-----C-----CCc-------------e--EEEE
Confidence 58899999999999999999 98 4788888 5 5689998862 0 010 2 5567
Q ss_pred EECCCCCcCCCCcEEEEEeCCEEEEEEeccCC
Q 039847 110 FNLPEGVIVKPNCFKASVEDGVLNVIFTKLKS 141 (172)
Q Consensus 110 f~LP~~vd~~~d~I~A~~~nGVL~V~vPK~~~ 141 (172)
+.|=..|+. + -+.++...-+.|+|.|++.
T Consensus 54 l~L~~~Idp--e-S~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 54 LELYGKIMT--E-YRKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EEBSSCEEE--E-EEEEEESSSEEEEEEECCS
T ss_pred eEhhhcccc--c-ceEEecCCEEEEEEEECCC
Confidence 788888877 8 8888888889999999864
No 26
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=96.87 E-value=0.0041 Score=46.25 Aligned_cols=79 Identities=20% Similarity=0.233 Sum_probs=62.2
Q ss_pred CceeeEEECCCeEEEEEecCCC--CCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEE
Q 039847 31 NINGEWDDAGDNLMFKATLPTG--TKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISK 108 (172)
Q Consensus 31 ~p~vDi~Et~d~~vv~adLP~G--v~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R 108 (172)
.|++.|.++.+...|.+.||.| ++++|+.|.+ ..+.|.++..- . .++ ..|
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i--~~~~l~v~~kg------~-------~~~-----~~~-------- 58 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDI--QRRHLRVGLKG------Q-------PPV-----VDG-------- 58 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEE--ETTEEEEEETT------S-------CCS-----BCS--------
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEE--eCCEEEEEECC------c-------eEE-----Eec--------
Confidence 4789999999999999999955 8999999999 56788887532 0 010 222
Q ss_pred EEECCCCCcCCCCcEEEEEeCC-EEEEEEeccCC
Q 039847 109 SFNLPEGVIVKPNCFKASVEDG-VLNVIFTKLKS 141 (172)
Q Consensus 109 ~f~LP~~vd~~~d~I~A~~~nG-VL~V~vPK~~~ 141 (172)
.|...|+. +.-.-++++| .|.|+|-|..+
T Consensus 59 --~L~~~I~~--e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 59 --ELYNEVKV--EESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp --CBSSCBCS--TTCEEEEETTTEEEEEEEBSSS
T ss_pred --cccccccc--ccCEEEEcCCCEEEEEEEECCC
Confidence 36677877 8899999998 89999999864
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=96.71 E-value=0.00087 Score=50.51 Aligned_cols=85 Identities=9% Similarity=0.129 Sum_probs=58.5
Q ss_pred cCceeeEEECCCe-------EEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCC
Q 039847 30 LNINGEWDDAGDN-------LMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDG 102 (172)
Q Consensus 30 ~~p~vDi~Et~d~-------~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~ 102 (172)
..|.++|+++.+. ..|++.+| +++ ++.|.+ ..+.|.+++... . ..++ ..+.
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~-~~~--~~~V~~--~~~~l~~~~~~~-----~---~~g~---~~~~------ 62 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIA-DCD--APELTI--KPSYIELKAQSK-----P---HVGD---ENVH------ 62 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCS-SEE--SCCCCB--CSSEEEECCEEC------------------CE------
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEec-CCC--ceEEEE--ECCEEEEEEecc-----c---ccCC---ccCc------
Confidence 3588999999877 99999999 974 888888 567899987651 0 0000 0000
Q ss_pred eeeEEEEEECCCCCcCCCCcEEEEEeCCE-EEEEEeccC
Q 039847 103 KIDISKSFNLPEGVIVKPNCFKASVEDGV-LNVIFTKLK 140 (172)
Q Consensus 103 ~~~F~R~f~LP~~vd~~~d~I~A~~~nGV-L~V~vPK~~ 140 (172)
. |.-.+.|...|+. +.-+.++.++. |.|+|.|++
T Consensus 63 ~--y~~~l~L~~~Idp--e~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 63 H--YQLHIDLYKEIIP--EKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp E--BCEEEECSSCCCS--SSEEEEECCC--CEEEEEECS
T ss_pred e--EEEEEEChhhccc--cccEEEECCCEEEEEEEEECC
Confidence 2 5567889998977 99999999998 999999987
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=68.37 E-value=10 Score=25.41 Aligned_cols=32 Identities=13% Similarity=0.171 Sum_probs=27.4
Q ss_pred EEEEEECCCCCcCCCCcEEEEEeCCEEEEEEeccC
Q 039847 106 ISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLK 140 (172)
Q Consensus 106 F~R~f~LP~~vd~~~d~I~A~~~nGVL~V~vPK~~ 140 (172)
|.=.+.|| +++. +.|+-++++|+|+|+--+..
T Consensus 9 ~~v~~dlP-G~~~--edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 9 WRVSLDVN-HFAP--DELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEECT-TTCC--SEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEECC-CCCh--HHEEEEEECCEEEEEEEEcc
Confidence 88899999 5766 99999999999999986654
No 29
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=62.97 E-value=11 Score=29.41 Aligned_cols=45 Identities=16% Similarity=0.330 Sum_probs=32.3
Q ss_pred CceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEEECCCCCcCCCCcEEEEEeCCEEEEE
Q 039847 56 EELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKASVEDGVLNVI 135 (172)
Q Consensus 56 edI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f~LP~~vd~~~d~I~A~~~nGVL~V~ 135 (172)
+.++|++ +++.++++|.+ | + .+|.| +..+ +...+||.|+|+
T Consensus 12 ~gV~V~i--~~~~VtVkGpk------------------------G--~--L~~~~--~~~v-------~i~~~~~~l~v~ 52 (177)
T 1rl6_A 12 AGVTVTV--NGNTVTVKGPK------------------------G--E--LTRTF--HPDM-------TITVEGNVITVT 52 (177)
T ss_dssp TTCEEEE--ETTEEEEEETT------------------------E--E--EEEEC--CTTC-------EEEEETTEEEEE
T ss_pred CCCEEEE--eCCEEEEECCC------------------------e--E--EEEEc--CCCE-------EEEEeCCEEEEE
Confidence 7788999 78899999976 4 4 44544 4433 445789999998
Q ss_pred Eecc
Q 039847 136 FTKL 139 (172)
Q Consensus 136 vPK~ 139 (172)
.|..
T Consensus 53 ~~~~ 56 (177)
T 1rl6_A 53 RPSD 56 (177)
T ss_dssp CSCC
T ss_pred cCCC
Confidence 6654
No 30
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=60.92 E-value=13 Score=29.91 Aligned_cols=50 Identities=10% Similarity=0.199 Sum_probs=34.7
Q ss_pred EEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEEECCCCCcCCCCcEEE
Q 039847 46 KATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKA 125 (172)
Q Consensus 46 ~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f~LP~~vd~~~d~I~A 125 (172)
.+.+| +.++|++ +++.++++|.+ | + .++.| +.. |..
T Consensus 35 pI~IP-----~gV~V~i--~~~~VtVKGPk------------------------G--~--L~~~~--~~~-------v~i 70 (212)
T 1nkw_E 35 PIAVP-----SGVTVNA--QDGVFKVKGPK------------------------G--E--LTVPY--NTE-------LTV 70 (212)
T ss_pred ceecC-----CCcEEEE--eCCEEEEECCC------------------------E--E--EEEEC--CCC-------eEE
Confidence 44566 7788999 78899999876 3 4 44444 433 344
Q ss_pred EEeCCEEEEEEecc
Q 039847 126 SVEDGVLNVIFTKL 139 (172)
Q Consensus 126 ~~~nGVL~V~vPK~ 139 (172)
..++|.|+|+.+..
T Consensus 71 ~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 71 RQDGDQLLVERPSD 84 (212)
T ss_pred EEECCEEEEEcCCC
Confidence 56899988887655
No 31
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=55.91 E-value=18 Score=25.52 Aligned_cols=23 Identities=17% Similarity=0.352 Sum_probs=18.5
Q ss_pred EEecCCCCCCCceEEEEEeCCCEEEEEEEe
Q 039847 46 KATLPTGTKMEELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 46 ~adLP~Gv~kedI~V~v~~d~~~L~IsGer 75 (172)
-+.+| +.++|++ +++.++++|.+
T Consensus 16 pI~IP-----~gV~V~i--~~~~VtVKGPk 38 (100)
T 2cql_A 16 TVDIP-----ENVDITL--KGRTVIVKGPR 38 (100)
T ss_dssp EECCC-----SSCEEEE--ETTEEEEEETT
T ss_pred cEEcC-----CCCEEEE--eCCEEEEECCC
Confidence 35666 7889999 78899999976
No 32
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=54.77 E-value=20 Score=24.08 Aligned_cols=31 Identities=16% Similarity=0.088 Sum_probs=27.2
Q ss_pred EEEEEECCCCCcCCCCcEEEEEeCCEEEEEEecc
Q 039847 106 ISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKL 139 (172)
Q Consensus 106 F~R~f~LP~~vd~~~d~I~A~~~nGVL~V~vPK~ 139 (172)
|.=.+.|| +++. +.|+-++.+|.|+|+--+.
T Consensus 8 ~~v~~dlP-G~~~--edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 8 FSVNLDVK-HFSP--EELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp EEEEEECT-TSCG--GGEEEEEETTEEEEEEEEE
T ss_pred EEEEEECC-CCcH--HHeEEEEECCEEEEEEEEe
Confidence 88899999 6866 9999999999999997654
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=53.36 E-value=22 Score=24.79 Aligned_cols=30 Identities=3% Similarity=0.032 Sum_probs=26.6
Q ss_pred EEEEEECCCCCcCCCCcEEEEEeCCEEEEEEec
Q 039847 106 ISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTK 138 (172)
Q Consensus 106 F~R~f~LP~~vd~~~d~I~A~~~nGVL~V~vPK 138 (172)
|.=.+.|| +++. +.|+-++.+|.|+|+--+
T Consensus 14 ~~v~~dlP-G~~~--edi~V~v~~~~L~I~g~~ 43 (106)
T 3l1e_A 14 FVIFLDVK-HFSP--EDLTVKVQEDFVEIHGKH 43 (106)
T ss_dssp EEEEEECT-TSCG--GGEEEEEETTEEEEEEEE
T ss_pred EEEEEECC-CCCh--HHEEEEEECCEEEEEEEE
Confidence 88899999 5766 999999999999999754
No 34
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=53.03 E-value=21 Score=24.57 Aligned_cols=31 Identities=10% Similarity=-0.019 Sum_probs=27.2
Q ss_pred EEEEEECCCCCcCCCCcEEEEEeCCEEEEEEecc
Q 039847 106 ISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKL 139 (172)
Q Consensus 106 F~R~f~LP~~vd~~~d~I~A~~~nGVL~V~vPK~ 139 (172)
|.=.+.|| +++. +.|+-++++|.|+|+--+.
T Consensus 13 ~~v~~dlP-G~~~--edI~V~v~~~~L~I~g~~~ 43 (101)
T 2wj5_A 13 FSVLLDVK-HFSP--EEISVKVVGDHVEVHARHE 43 (101)
T ss_dssp EEEEEECT-TSCG--GGEEEEEETTEEEEEEEEE
T ss_pred EEEEEECC-CCcH--HHeEEEEECCEEEEEEEEe
Confidence 88899999 6866 9999999999999997664
No 35
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=52.65 E-value=29 Score=26.94 Aligned_cols=18 Identities=11% Similarity=0.089 Sum_probs=15.7
Q ss_pred CceEEEEEeCCCEEEEEEEe
Q 039847 56 EELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 56 edI~V~v~~d~~~L~IsGer 75 (172)
+.++|++ +++.++++|.+
T Consensus 13 ~gV~v~i--~~~~v~VkGpk 30 (180)
T 3v2d_H 13 KGVSVEV--APGRVKVKGPK 30 (180)
T ss_dssp TTCEEEE--ETTEEEEECSS
T ss_pred CCcEEEE--eCCEEEEEeCC
Confidence 8899999 78899999876
No 36
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=51.17 E-value=11 Score=25.33 Aligned_cols=15 Identities=27% Similarity=0.485 Sum_probs=12.4
Q ss_pred CcEEEEEeCCEEEEE
Q 039847 121 NCFKASVEDGVLNVI 135 (172)
Q Consensus 121 d~I~A~~~nGVL~V~ 135 (172)
..|.|-|+||||.--
T Consensus 3 k~IeAiYEnGVfkPL 17 (69)
T 2nwt_A 3 KIIEAVYENGVFKPL 17 (69)
T ss_dssp CCEEEEEETTEEEES
T ss_pred ceEEEEEECCEEeEC
Confidence 459999999999743
No 37
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=50.42 E-value=38 Score=26.47 Aligned_cols=24 Identities=17% Similarity=0.314 Sum_probs=20.1
Q ss_pred EEEecCCCCCCCceEEEEEeCCCEEEEEEEe
Q 039847 45 FKATLPTGTKMEELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 45 v~adLP~Gv~kedI~V~v~~d~~~L~IsGer 75 (172)
-.+++| +.++|++ +++.++++|.+
T Consensus 9 ~~I~IP-----~gV~v~i--~~~~V~VkGpk 32 (184)
T 3j21_F 9 EEVEIP-----EGVEVTV--EGYKVKVKGPK 32 (184)
T ss_dssp EEEECC-----SSCEEEE--SSSEEEEECSS
T ss_pred EEEeCC-----CCcEEEE--eCCEEEEEcCC
Confidence 456778 8899999 78999999876
No 38
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=49.50 E-value=37 Score=23.22 Aligned_cols=31 Identities=10% Similarity=0.067 Sum_probs=25.5
Q ss_pred EEEEEecCCCCCCCceEEEEEeCCCEEEEEEEe
Q 039847 43 LMFKATLPTGTKMEELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 43 ~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer 75 (172)
|.-.+.||.+++.+.++-.+ .+++|+|+-.+
T Consensus 63 f~R~~~LP~~vd~~~i~A~~--~~GvL~I~lpK 93 (102)
T 4fei_A 63 FVRELAFPEPVRPASGVASL--AGGVLTVRFEK 93 (102)
T ss_dssp EEEEEECSSCBCTTCCEEEE--ETTEEEEEEEB
T ss_pred EEEEEECCCCcchhHcEEEE--ECCEEEEEEEc
Confidence 34466799779999999999 56799999887
No 39
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=48.91 E-value=31 Score=23.29 Aligned_cols=32 Identities=9% Similarity=0.198 Sum_probs=26.8
Q ss_pred eEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEe
Q 039847 42 NLMFKATLPTGTKMEELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 42 ~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer 75 (172)
.|.-.+.||.+++.+.|+-.+ .+++|+|+-.+
T Consensus 65 ~f~r~~~LP~~vd~~~i~A~~--~~GvL~I~~pK 96 (100)
T 3gla_A 65 SFHRRFALPDSADADGITAAG--RNGVLEIRIPK 96 (100)
T ss_dssp EEEEEEECCTTBCTTSCEEEE--ETTEEEEEEEB
T ss_pred EEEEEEECCCCcChHHeEEEE--eCCEEEEEEec
Confidence 566678999679999999999 46799999776
No 40
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=46.03 E-value=35 Score=26.52 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=35.1
Q ss_pred EEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEEECCCCCcCCCCcEEE
Q 039847 46 KATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKA 125 (172)
Q Consensus 46 ~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f~LP~~vd~~~d~I~A 125 (172)
.+.+| +.++|++ +++.++++|.+ | + .+|.|. +.. ++-
T Consensus 5 pI~IP-----~gV~v~i--~~~~vtVkGpk------------------------G--~--L~~~~~-~~~-------v~i 41 (178)
T 1vq8_E 5 ELEIP-----EDVDAEQ--DHLDITVEGDN------------------------G--S--VTRRLW-YPD-------IDV 41 (178)
T ss_dssp EEECC-----TTCEEEE--ETTEEEEEETT------------------------E--E--EEEECC-CTT-------CEE
T ss_pred cEEcC-----CCCEEEE--eCCEEEEECCC------------------------e--E--EEEEEE-CCe-------EEE
Confidence 35667 7788999 78899999976 3 4 444442 322 444
Q ss_pred EEeCCEEEEEEecc
Q 039847 126 SVEDGVLNVIFTKL 139 (172)
Q Consensus 126 ~~~nGVL~V~vPK~ 139 (172)
..++|.|+|+.+..
T Consensus 42 ~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 42 SVDGDTVVIESDED 55 (178)
T ss_dssp EEETTEEEEECSCC
T ss_pred EEECCEEEEEcCCC
Confidence 67899999886654
No 41
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=43.85 E-value=16 Score=28.40 Aligned_cols=18 Identities=6% Similarity=0.300 Sum_probs=15.2
Q ss_pred CceEEEEEeCCCEEEEEEEe
Q 039847 56 EELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 56 edI~V~v~~d~~~L~IsGer 75 (172)
+.++|++ +++.++++|.+
T Consensus 12 ~gV~v~i--~~~~V~VkGpk 29 (176)
T 3r8s_G 12 AGVDVKI--NGQVITIKGKN 29 (176)
T ss_dssp TTCCCEE--SSSEEECCBTT
T ss_pred CCcEEEE--eCCEEEEEcCC
Confidence 7788888 78899998876
No 42
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=42.46 E-value=58 Score=24.08 Aligned_cols=32 Identities=19% Similarity=0.105 Sum_probs=27.8
Q ss_pred EEEEEECCCCCcCCCCcEEEEEeCCEEEEEEeccC
Q 039847 106 ISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKLK 140 (172)
Q Consensus 106 F~R~f~LP~~vd~~~d~I~A~~~nGVL~V~vPK~~ 140 (172)
|.=.+.|| +++. +.|+-++++|.|+|+--+..
T Consensus 68 ~~v~~dlP-G~~~--edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 68 IKVIAWLP-GVNK--EDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp EEEEEECT-TCCG--GGEEEEEETTEEEEEEECCC
T ss_pred EEEEEECC-CCCh--HhEEEEEECCEEEEEEEEcc
Confidence 88899998 5766 99999999999999987665
No 43
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=41.54 E-value=53 Score=23.10 Aligned_cols=33 Identities=18% Similarity=0.110 Sum_probs=28.6
Q ss_pred EEEEEECCCCCcCCCCcEEEEEeC-CEEEEEEeccCC
Q 039847 106 ISKSFNLPEGVIVKPNCFKASVED-GVLNVIFTKLKS 141 (172)
Q Consensus 106 F~R~f~LP~~vd~~~d~I~A~~~n-GVL~V~vPK~~~ 141 (172)
|.=.+.|| +++. +.|+-++.+ |.|+|+--+...
T Consensus 36 ~~v~~~lP-G~~~--edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 36 LVVVADLA-GFNK--EKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEECC-SCCG--GGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEECC-CCCH--HHEEEEEeCCCEEEEEEEEecc
Confidence 88899999 5766 999999999 999999876653
No 44
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=40.07 E-value=59 Score=25.43 Aligned_cols=22 Identities=14% Similarity=0.336 Sum_probs=18.4
Q ss_pred EecCCCCCCCceEEEEEeCCCEEEEEEEe
Q 039847 47 ATLPTGTKMEELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 47 adLP~Gv~kedI~V~v~~d~~~L~IsGer 75 (172)
+.+| +.++|++ +++.++++|.+
T Consensus 10 I~IP-----~gV~v~i--~~~~V~VkGPk 31 (190)
T 3iz5_F 10 MEIP-----EGVTVQV--AAKVVTVEGPR 31 (190)
T ss_dssp EECC-----TTCEEEE--ETTEEEEEETT
T ss_pred EECC-----CCCEEEE--eCCEEEEECCC
Confidence 5667 8889999 78899999976
No 45
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=38.61 E-value=18 Score=25.78 Aligned_cols=18 Identities=22% Similarity=0.434 Sum_probs=15.4
Q ss_pred cEEEEEeCCEEEEEEecc
Q 039847 122 CFKASVEDGVLNVIFTKL 139 (172)
Q Consensus 122 ~I~A~~~nGVL~V~vPK~ 139 (172)
.+.+.+.+|||+|+++..
T Consensus 29 d~D~e~~~gVLti~f~~~ 46 (106)
T 1ew4_A 29 DIDCEINGGVLTITFENG 46 (106)
T ss_dssp CCEEEEETTEEEEECTTS
T ss_pred CEeeeccCCEEEEEECCC
Confidence 488999999999999744
No 46
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=34.75 E-value=60 Score=25.44 Aligned_cols=23 Identities=13% Similarity=0.339 Sum_probs=18.8
Q ss_pred EEecCCCCCCCceEEEEEeCCCEEEEEEEe
Q 039847 46 KATLPTGTKMEELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 46 ~adLP~Gv~kedI~V~v~~d~~~L~IsGer 75 (172)
.+.+| +.++|++ +++.++++|.+
T Consensus 9 ~I~IP-----~gV~v~i--~~~~V~VkGPk 31 (191)
T 3u5e_H 9 QIEVP-----EGVTVSI--KSRIVKVVGPR 31 (191)
T ss_dssp EEECC-----TTCEEEE--ETTEEEEEETT
T ss_pred cEECC-----CCcEEEE--eCCEEEEEcCC
Confidence 35667 8889999 78899999976
No 47
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=31.88 E-value=70 Score=23.54 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=26.2
Q ss_pred eEEEEEecCCCCCCCceEEEEEeCCCEEEEEEEe
Q 039847 42 NLMFKATLPTGTKMEELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 42 ~~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer 75 (172)
.|.-.+.||.+++.+.|+-.+ .+++|+|+-.+
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~--~nGvL~I~lPK 136 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGL--ENGVLTVTVPK 136 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEE--ETTEEEEEEEC
T ss_pred EEEEEEECCCCccccceEEEE--ECCEEEEEEEc
Confidence 355567899779999999999 56799999877
No 48
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=31.78 E-value=55 Score=25.03 Aligned_cols=31 Identities=16% Similarity=0.088 Sum_probs=26.7
Q ss_pred EEEEEECCCCCcCCCCcEEEEEeCCEEEEEEecc
Q 039847 106 ISKSFNLPEGVIVKPNCFKASVEDGVLNVIFTKL 139 (172)
Q Consensus 106 F~R~f~LP~~vd~~~d~I~A~~~nGVL~V~vPK~ 139 (172)
|.=.+.|| +++. +.|+-++.+|.|+|+--+.
T Consensus 75 ~~v~~dlP-G~~~--edI~V~v~~~~L~I~g~~~ 105 (175)
T 2klr_A 75 FSVNLDVK-HFSP--EELKVKVLGDVIEVHGKHE 105 (175)
T ss_dssp EEEEECCS-SCCG--GGEEEEEETTEEEEEEEEE
T ss_pred EEEEEECC-CCCh--HHEEEEEECCEEEEEEEEc
Confidence 88899999 6766 9999999999999997554
No 49
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=30.98 E-value=39 Score=21.40 Aligned_cols=19 Identities=16% Similarity=0.396 Sum_probs=17.0
Q ss_pred CCceEEEEEeCCCEEEEEEEe
Q 039847 55 MEELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 55 kedI~V~v~~d~~~L~IsGer 75 (172)
-+||+|.. ||+++++.|+-
T Consensus 32 yndinvtw--dgdtvtvegql 50 (62)
T 2gjh_A 32 YNDINVTW--DGDTVTVEGQL 50 (62)
T ss_dssp CCSCEEEE--CSSCEEEEEEC
T ss_pred cccceeEE--cCCEEEEEeEE
Confidence 47999999 89999999997
No 50
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=27.91 E-value=42 Score=24.65 Aligned_cols=17 Identities=12% Similarity=0.286 Sum_probs=15.0
Q ss_pred EEEEEeCCEEEEEEecc
Q 039847 123 FKASVEDGVLNVIFTKL 139 (172)
Q Consensus 123 I~A~~~nGVL~V~vPK~ 139 (172)
+.+.+.+|||+|+++..
T Consensus 49 ~Dve~~~gVLti~f~~~ 65 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPAF 65 (123)
T ss_dssp CEEEECSSEEEEECTTT
T ss_pred eEEEccCCEEEEEECCC
Confidence 78999999999999743
No 51
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=26.80 E-value=49 Score=26.69 Aligned_cols=45 Identities=29% Similarity=0.431 Sum_probs=31.5
Q ss_pred CceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEEEEeeeecCCCeeeEEEEEECCCCCcCCCCcEEE-EEeCCEEEE
Q 039847 56 EELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWVLKECCSSGDGKIDISKSFNLPEGVIVKPNCFKA-SVEDGVLNV 134 (172)
Q Consensus 56 edI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~~~Er~~~G~~~~~F~R~f~LP~~vd~~~d~I~A-~~~nGVL~V 134 (172)
+.++|++ +++.++++|.+ | + .++.| +..+ +- ..+||.|+|
T Consensus 55 ~gV~V~i--~~~~VtVKGPk------------------------G--~--L~~~~--~~~v-------~i~~~e~~~i~v 95 (223)
T 3bbo_I 55 SNVTIAL--EGQDLKVKGPL------------------------G--E--LALTY--PREV-------ELTKEESGFLRV 95 (223)
T ss_dssp TTSCEEE--SSSEEEECCSS------------------------C--C--EEEEC--CSSC-------EEEECSSSCEEE
T ss_pred CCCEEEE--eCCEEEEECCC------------------------e--E--EEEEc--CCCE-------EEEEecCCEEEE
Confidence 7788999 78999999876 4 4 44444 4433 33 568899988
Q ss_pred EEecc
Q 039847 135 IFTKL 139 (172)
Q Consensus 135 ~vPK~ 139 (172)
+.+..
T Consensus 96 ~~~~~ 100 (223)
T 3bbo_I 96 KKTVE 100 (223)
T ss_dssp ECSSC
T ss_pred EcCCC
Confidence 87654
No 52
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=23.94 E-value=44 Score=24.64 Aligned_cols=17 Identities=29% Similarity=0.434 Sum_probs=14.9
Q ss_pred CcEEEEEeCCEEEEEEe
Q 039847 121 NCFKASVEDGVLNVIFT 137 (172)
Q Consensus 121 d~I~A~~~nGVL~V~vP 137 (172)
..+.+.+.+|||||+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45888999999999996
No 53
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=22.73 E-value=1.3e+02 Score=22.76 Aligned_cols=23 Identities=17% Similarity=0.273 Sum_probs=17.0
Q ss_pred EEEEEecCCCCCCCceEEEEEeCCCEEEEEEEe
Q 039847 43 LMFKATLPTGTKMEELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 43 ~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer 75 (172)
-.+.+.+|.|++ +|..|++.|+-
T Consensus 43 ~~l~V~Ip~G~~----------~G~~ir~~G~G 65 (181)
T 3agx_A 43 KILTIEVKKGWK----------EGTKITFPKEG 65 (181)
T ss_dssp EEEEEEECTTCC----------TTCEEEETTCS
T ss_pred EEEEEEECCCcc----------CCcEEEEeecc
Confidence 568889998885 56677777665
No 54
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=22.40 E-value=91 Score=26.98 Aligned_cols=44 Identities=11% Similarity=0.123 Sum_probs=27.3
Q ss_pred CCcEEEEEeCCEEEEEEeccCCC--CcceeeeceeeeccccEEEEE
Q 039847 120 PNCFKASVEDGVLNVIFTKLKSK--KKIMSKVLGVVAKAVPVVVLI 163 (172)
Q Consensus 120 ~d~I~A~~~nGVL~V~vPK~~~~--k~~~~~I~~~~~~~~~~~~~~ 163 (172)
++++++++...-|+|++...... -.-...+|....+++||++.|
T Consensus 67 ~~~v~~~~~g~~~~i~~~~~~~s~~~~~~i~lP~~~~~p~Pvii~i 112 (375)
T 3pic_A 67 PSTLTASFSGNTLTINCGEAGKSISFTVTITYPSSGTAPYPAIIGY 112 (375)
T ss_dssp CSEEEEEEETTEEEEEEEETTEEEEEEEEEECCSSSCSSEEEEEEE
T ss_pred CCceEEEEeCCEEEEEEecCCceeEEEEEEECCCCCCCCccEEEEE
Confidence 47899999988999999864221 111223333334667777654
No 55
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=21.89 E-value=75 Score=24.85 Aligned_cols=19 Identities=16% Similarity=0.198 Sum_probs=16.2
Q ss_pred CCceEEEEEeCCCEEEEEEEe
Q 039847 55 MEELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 55 kedI~V~v~~d~~~L~IsGer 75 (172)
|+.++|++ +++.++++|.+
T Consensus 13 P~gV~V~i--~~~~VtVkGpk 31 (192)
T 2zkr_e 13 PENVDITL--KGRTVIVKGPR 31 (192)
T ss_dssp CTTCEEEE--ETTEEEEEETT
T ss_pred CCCCEEEE--eCCEEEEECCC
Confidence 47889999 78899999976
No 56
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=21.88 E-value=83 Score=25.13 Aligned_cols=91 Identities=14% Similarity=0.157 Sum_probs=45.2
Q ss_pred EEEEEecCCCCCCCceEEEEEeCCCEEEEEEEecCCCCCCCcccccccEE-EEeeeec------CCCeeeEEEEEECCCC
Q 039847 43 LMFKATLPTGTKMEELKIESTEDGKLLKLSKVLPEGDNGDGEHEAAVMWV-LKECCSS------GDGKIDISKSFNLPEG 115 (172)
Q Consensus 43 ~vv~adLP~Gv~kedI~V~v~~d~~~L~IsGer~~~~~~~e~~~~~~~~~-~~Er~~~------G~~~~~F~R~f~LP~~ 115 (172)
-.|.+.+|.|++ +|..|++.|+-.+.. .. ..++-|. ..+. .. |. ..++.-.++|.+.
T Consensus 112 ~~l~V~Ip~G~~----------~G~~ir~~g~G~~~~---~g-~~GDl~v~i~v~-~h~~F~R~G~-DL~~~~~Isl~eA 175 (248)
T 1nlt_A 112 KILEVHVEPGMK----------DGQRIVFKGEADQAP---DV-IPGDVVFIVSER-PHKSFKRDGD-DLVYEAEIDLLTA 175 (248)
T ss_dssp EEEEEEECTTCC----------TTCEEEETTCSCCCT---TC-BCCCEEEEEEEC-CCSSCEEETT-EEEEEEEEEHHHH
T ss_pred EEEEEEECCCcc----------CCCEEEEeeeecCCC---CC-CcceEEEEEEEe-cCccceeeCC-EEEEEEEeCHHHH
Confidence 568888888885 566777776642110 00 1122222 1222 22 21 1112233444443
Q ss_pred CcCCCCcEEEEEeCC-EEEEEEeccC-CCCcceeeece
Q 039847 116 VIVKPNCFKASVEDG-VLNVIFTKLK-SKKKIMSKVLG 151 (172)
Q Consensus 116 vd~~~d~I~A~~~nG-VL~V~vPK~~-~~k~~~~~I~~ 151 (172)
+-= -.+.-..=|| .|.|.+|.-+ .+.-.+.+|.|
T Consensus 176 llG--~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g 211 (248)
T 1nlt_A 176 IAG--GEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEG 211 (248)
T ss_dssp HHC--BCCEEECSSSCEEECCBCTTTTCSTTCEEEETT
T ss_pred hcC--CEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcC
Confidence 322 3455555578 6999998642 34445566666
No 57
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=20.84 E-value=72 Score=21.16 Aligned_cols=22 Identities=14% Similarity=0.116 Sum_probs=18.2
Q ss_pred CCCCCceEEEEEeCCCEEEEEEEe
Q 039847 52 GTKMEELKIESTEDGKLLKLSKVL 75 (172)
Q Consensus 52 Gv~kedI~V~v~~d~~~L~IsGer 75 (172)
-|+.+.|.++. ..+.|+|+|+.
T Consensus 17 sFd~e~i~L~T--~~G~L~IkG~~ 38 (71)
T 2ks0_A 17 SFDPKEILLET--IQGVLSIKGEK 38 (71)
T ss_dssp EECSSEEEEEE--TTEEEEEEEEC
T ss_pred EECCCEEEEEe--CceEEEEEcCC
Confidence 36788899988 66789999996
Done!