Your job contains 1 sequence.
>039848
ALSKVIRSWAWKKFMTGCDNLLTLFCGVILLPIAITFYLTWWFIHFVDGFFSPIYAHLGI
NISGLGFMTSITFIFLVGVFMSSWLGASILSLGEWLIKKMPLISYIYSASKQISAAISPD
QKTKAFKEVAIIRHPRIGESAIGFITSTLILHGSSGQEELCCVF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039848
(164 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061668 - symbol:COV1 "AT2G20120" species:3702... 624 5.5e-61 1
TAIR|locus:2061654 - symbol:LCV1 "AT2G20130" species:3702... 618 2.4e-60 1
TAIR|locus:2018640 - symbol:LCV2 "AT1G43130" species:3702... 523 2.8e-50 1
UNIPROTKB|Q5LRR3 - symbol:SPO2062 "Uncharacterized protei... 202 2.9e-16 1
TIGR_CMR|SPO_2062 - symbol:SPO_2062 "conserved hypothetic... 202 2.9e-16 1
UNIPROTKB|Q3AEZ4 - symbol:CHY_0429 "Putative uncharacteri... 186 1.4e-14 1
TIGR_CMR|CHY_0429 - symbol:CHY_0429 "conserved hypothetic... 186 1.4e-14 1
UNIPROTKB|Q3Z7T7 - symbol:DET0989 "Putative uncharacteriz... 180 6.2e-14 1
TIGR_CMR|DET_0989 - symbol:DET_0989 "conserved hypothetic... 180 6.2e-14 1
UNIPROTKB|Q83BF1 - symbol:CBU_1559 "Hypothetical membrane... 174 2.7e-13 1
TIGR_CMR|CBU_1559 - symbol:CBU_1559 "conserved hypothetic... 174 2.7e-13 1
UNIPROTKB|Q0C0Q5 - symbol:HNE_1988 "Putative uncharacteri... 152 5.8e-11 1
UNIPROTKB|Q8EG72 - symbol:SO_1736 "Uncharacterized protei... 118 1.1e-06 1
TIGR_CMR|SO_1736 - symbol:SO_1736 "conserved hypothetical... 118 1.1e-06 1
>TAIR|locus:2061668 [details] [associations]
symbol:COV1 "AT2G20120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009734 "auxin mediated signaling
pathway" evidence=IGI] [GO:0010222 "stem vascular tissue pattern
formation" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=IDA]
GO:GO:0016021 GO:GO:0005794 EMBL:CP002685 IPI:IPI00542783
RefSeq:NP_565464.2 UniGene:At.20924 PRIDE:F4IUE7
EnsemblPlants:AT2G20120.1 GeneID:816531 KEGG:ath:AT2G20120
OMA:GFLTANI GO:GO:0010222 InterPro:IPR007462 Pfam:PF04367
Uniprot:F4IUE7
Length = 268
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 119/163 (73%), Positives = 134/163 (82%)
Query: 2 LSKVIRSWAWKKFMTGCDNLLTLFCGVILLPIAITFYLTWWFIHFVDGFFSPIYAHLGIN 61
LS IR WA KKFMTGC VILLPIAITFY+TWWFIHFVDGFFSPIYA LGIN
Sbjct: 55 LSLFIRGWASKKFMTGC---------VILLPIAITFYITWWFIHFVDGFFSPIYAQLGIN 105
Query: 62 ISGLGFMTSITFIFLVGVFMSSWLGASILSLGEWLIKKMPLISYIYSASKQISAAISPDQ 121
+ G GF+TSI FIFLVGVFMSSWLGAS+L+LGEW IK+MP + +IY+ASKQIS AISPDQ
Sbjct: 106 VFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQ 165
Query: 122 KTKAFKEVAIIRHPRIGESAIGFITSTLILHGSSGQEELCCVF 164
T+AFKEVAIIRHPR+GE A GFITST++L +EELCCV+
Sbjct: 166 NTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVY 208
>TAIR|locus:2061654 [details] [associations]
symbol:LCV1 "AT2G20130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005794 "Golgi apparatus" evidence=IDA]
GO:GO:0005794 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006081
InterPro:IPR007462 Pfam:PF04367 EMBL:AY072447 EMBL:AY084942
EMBL:AY128911 IPI:IPI00548016 PIR:D84585 RefSeq:NP_565465.1
UniGene:At.48495 IntAct:Q8VY49 EnsemblPlants:AT2G20130.1
GeneID:816532 KEGG:ath:AT2G20130 TAIR:At2g20130 eggNOG:COG2928
HOGENOM:HOG000238507 InParanoid:Q8VY49 OMA:QTSKGAN PhylomeDB:Q8VY49
ProtClustDB:CLSN2688267 ArrayExpress:Q8VY49 Genevestigator:Q8VY49
Uniprot:Q8VY49
Length = 256
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 119/163 (73%), Positives = 133/163 (81%)
Query: 2 LSKVIRSWAWKKFMTGCDNLLTLFCGVILLPIAITFYLTWWFIHFVDGFFSPIYAHLGIN 61
LS IR WA KKFMTGC VILLPIA+TFY TWWFIHFVDGFFSPIYA LGIN
Sbjct: 45 LSLFIRGWASKKFMTGC---------VILLPIAVTFYTTWWFIHFVDGFFSPIYALLGIN 95
Query: 62 ISGLGFMTSITFIFLVGVFMSSWLGASILSLGEWLIKKMPLISYIYSASKQISAAISPDQ 121
I G GF+TSI FIFLVGVFMSSWLGAS+L+LGEW IK+MP + +IY+ASKQIS AISPDQ
Sbjct: 96 IFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQ 155
Query: 122 KTKAFKEVAIIRHPRIGESAIGFITSTLILHGSSGQEELCCVF 164
T+AFKEVAIIRHPR+GE A GFITST++L +EELCCV+
Sbjct: 156 NTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVY 198
>TAIR|locus:2018640 [details] [associations]
symbol:LCV2 "AT1G43130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0010222
"stem vascular tissue pattern formation" evidence=ISS] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
EMBL:CP002684 GO:GO:0005794 GO:GO:0005768 GO:GO:0005802
EMBL:AC026757 GO:GO:0010222 InterPro:IPR007462 Pfam:PF04367
ProtClustDB:CLSN2688267 EMBL:BT033158 EMBL:AK176692 EMBL:AK176760
IPI:IPI00521827 RefSeq:NP_564483.1 UniGene:At.39020 PRIDE:Q9C8C1
EnsemblPlants:AT1G43130.1 GeneID:840912 KEGG:ath:AT1G43130
TAIR:At1g43130 InParanoid:Q9C8C1 OMA:FVKHIYS PhylomeDB:Q9C8C1
ArrayExpress:Q9C8C1 Genevestigator:Q9C8C1 Uniprot:Q9C8C1
Length = 261
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 100/160 (62%), Positives = 123/160 (76%)
Query: 5 VIRSWAWKKFMTGCDNLLTLFCGVILLPIAITFYLTWWFIHFVDGFFSPIYAHLGINISG 64
V++SW KKFMTG F V+L P+A+TF +TWWFI FVDGFFSPIY +LG++I G
Sbjct: 44 VLQSWVSKKFMTG-------F--VVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVDIFG 94
Query: 65 LGFMTSITFIFLVGVFMSSWLGASILSLGEWLIKKMPLISYIYSASKQISAAISPDQKTK 124
LGF+TS+ F F VG+F SSWLG+++ LGE I++MP + +IYSASKQIS AISPDQ T
Sbjct: 95 LGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVKHIYSASKQISTAISPDQNTT 154
Query: 125 AFKEVAIIRHPRIGESAIGFITSTLILHGSSGQEELCCVF 164
AFKEVAIIRHPRIGE A GFITS++ L G+EELC V+
Sbjct: 155 AFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVY 194
>UNIPROTKB|Q5LRR3 [details] [associations]
symbol:SPO2062 "Uncharacterized protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR007462 Pfam:PF04367
HOGENOM:HOG000264416 OMA:KYIISMG RefSeq:YP_167292.1 DNASU:3193433
GeneID:3193433 KEGG:sil:SPO2062 PATRIC:23377465
ProtClustDB:CLSK933739 Uniprot:Q5LRR3
Length = 224
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 40/128 (31%), Positives = 74/128 (57%)
Query: 28 VILLPIAITFYLTWWFIHFVDGFFSPIYAH-------LGINISGLGFMTSITFIFLVGVF 80
V++ P+ +T +L W + +VD F P+ H +GIN+ G+G + + F +VG
Sbjct: 29 VVIAPVGLTIWLFWSVVGWVDSFVLPLVPHQFRPEQYIGINLRGVGVIFLLVFTIVVGWI 88
Query: 81 MSSWLGASILSLGEWLIKKMPLISYIYSASKQISAAISPDQKTKAFKEVAIIRHPRIGES 140
+G S++ E ++ +MP++ +YS KQIS + Q ++F++ +I++PR G
Sbjct: 89 AKGIIGRSLIQYAEGVVDRMPVVRSVYSGIKQISETVFA-QTERSFEQACLIQYPRRGIW 147
Query: 141 AIGFITST 148
AIGF+++T
Sbjct: 148 AIGFVSTT 155
>TIGR_CMR|SPO_2062 [details] [associations]
symbol:SPO_2062 "conserved hypothetical protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000031 GenomeReviews:CP000031_GR InterPro:IPR007462
Pfam:PF04367 HOGENOM:HOG000264416 OMA:KYIISMG RefSeq:YP_167292.1
DNASU:3193433 GeneID:3193433 KEGG:sil:SPO2062 PATRIC:23377465
ProtClustDB:CLSK933739 Uniprot:Q5LRR3
Length = 224
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 40/128 (31%), Positives = 74/128 (57%)
Query: 28 VILLPIAITFYLTWWFIHFVDGFFSPIYAH-------LGINISGLGFMTSITFIFLVGVF 80
V++ P+ +T +L W + +VD F P+ H +GIN+ G+G + + F +VG
Sbjct: 29 VVIAPVGLTIWLFWSVVGWVDSFVLPLVPHQFRPEQYIGINLRGVGVIFLLVFTIVVGWI 88
Query: 81 MSSWLGASILSLGEWLIKKMPLISYIYSASKQISAAISPDQKTKAFKEVAIIRHPRIGES 140
+G S++ E ++ +MP++ +YS KQIS + Q ++F++ +I++PR G
Sbjct: 89 AKGIIGRSLIQYAEGVVDRMPVVRSVYSGIKQISETVFA-QTERSFEQACLIQYPRRGIW 147
Query: 141 AIGFITST 148
AIGF+++T
Sbjct: 148 AIGFVSTT 155
>UNIPROTKB|Q3AEZ4 [details] [associations]
symbol:CHY_0429 "Putative uncharacterized protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP000141 GenomeReviews:CP000141_GR OMA:GFLTANI
InterPro:IPR007462 Pfam:PF04367 eggNOG:COG2928 HOGENOM:HOG000264416
RefSeq:YP_359290.1 STRING:Q3AEZ4 GeneID:3727678 KEGG:chy:CHY_0429
PATRIC:21274019 BioCyc:CHYD246194:GJCN-430-MONOMER Uniprot:Q3AEZ4
Length = 211
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 45/125 (36%), Positives = 71/125 (56%)
Query: 29 ILLPIAITFYLTWWFIHFVD----GFFSPIYAHLGINISGLGFMTSITFIFLVGVFMSSW 84
++ P AIT Y+ + F D GFF+ I+ GI+I GLG +T + +VG+ +++
Sbjct: 24 VITPAAITIYILFALFSFFDRPLRGFFAQIF---GIDIPGLGVLTVALLVPIVGMLATNF 80
Query: 85 LGASILSLGEWLIKKMPLISYIYSASKQ-ISAAISPDQKTKAFKEVAIIRHPRIGESAIG 143
+G IL E L K+P+ +Y SKQ I + P++ AFK V + R+P+ G A+G
Sbjct: 81 IGRKILKKFEQLFIKIPVTRSLYKTSKQLIETFLHPERD--AFKSVVLARYPKDGSYALG 138
Query: 144 FITST 148
FIT +
Sbjct: 139 FITGS 143
>TIGR_CMR|CHY_0429 [details] [associations]
symbol:CHY_0429 "conserved hypothetical protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP000141 GenomeReviews:CP000141_GR OMA:GFLTANI
InterPro:IPR007462 Pfam:PF04367 eggNOG:COG2928 HOGENOM:HOG000264416
RefSeq:YP_359290.1 STRING:Q3AEZ4 GeneID:3727678 KEGG:chy:CHY_0429
PATRIC:21274019 BioCyc:CHYD246194:GJCN-430-MONOMER Uniprot:Q3AEZ4
Length = 211
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 45/125 (36%), Positives = 71/125 (56%)
Query: 29 ILLPIAITFYLTWWFIHFVD----GFFSPIYAHLGINISGLGFMTSITFIFLVGVFMSSW 84
++ P AIT Y+ + F D GFF+ I+ GI+I GLG +T + +VG+ +++
Sbjct: 24 VITPAAITIYILFALFSFFDRPLRGFFAQIF---GIDIPGLGVLTVALLVPIVGMLATNF 80
Query: 85 LGASILSLGEWLIKKMPLISYIYSASKQ-ISAAISPDQKTKAFKEVAIIRHPRIGESAIG 143
+G IL E L K+P+ +Y SKQ I + P++ AFK V + R+P+ G A+G
Sbjct: 81 IGRKILKKFEQLFIKIPVTRSLYKTSKQLIETFLHPERD--AFKSVVLARYPKDGSYALG 138
Query: 144 FITST 148
FIT +
Sbjct: 139 FITGS 143
>UNIPROTKB|Q3Z7T7 [details] [associations]
symbol:DET0989 "Putative uncharacterized protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000027 GenomeReviews:CP000027_GR OMA:GFLTANI
InterPro:IPR007462 Pfam:PF04367 eggNOG:COG2928 HOGENOM:HOG000264416
RefSeq:YP_181712.1 STRING:Q3Z7T7 GeneID:3229747 KEGG:det:DET0989
PATRIC:21609027 ProtClustDB:CLSK837182
BioCyc:DETH243164:GJNF-990-MONOMER Uniprot:Q3Z7T7
Length = 214
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 40/137 (29%), Positives = 73/137 (53%)
Query: 30 LLPIAITFYLTWWFIHFVDGFFSPIYAHLGIN--ISGLGFMTSITFIFLVGVFMSSWLGA 87
+LPI L W + +DG P+ N GLG + ++ I+LVG+ +S++ G
Sbjct: 23 VLPIGAALGLLIWVFNIIDGLLKPVIEFF-FNWYFPGLGLLVTLVLIYLVGLILSNYFGK 81
Query: 88 SILSLGEWLIKKMPLISYIYSASKQISAAISPDQKTKAFKEVAIIRHPRIGESAIGFITS 147
IL + ++ K+P+ + +Y+++KQ+ + K +FKE ++ PR G ++ FIT+
Sbjct: 82 QILGWVDKILVKVPIFNQVYNSAKQVIETLGVSNKV-SFKEAVMVEFPRTGMHSLAFITN 140
Query: 148 TLILHGSSGQEELCCVF 164
S+G E+L V+
Sbjct: 141 ETT--NSAG-EKLYLVY 154
>TIGR_CMR|DET_0989 [details] [associations]
symbol:DET_0989 "conserved hypothetical protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000027 GenomeReviews:CP000027_GR OMA:GFLTANI
InterPro:IPR007462 Pfam:PF04367 eggNOG:COG2928 HOGENOM:HOG000264416
RefSeq:YP_181712.1 STRING:Q3Z7T7 GeneID:3229747 KEGG:det:DET0989
PATRIC:21609027 ProtClustDB:CLSK837182
BioCyc:DETH243164:GJNF-990-MONOMER Uniprot:Q3Z7T7
Length = 214
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 40/137 (29%), Positives = 73/137 (53%)
Query: 30 LLPIAITFYLTWWFIHFVDGFFSPIYAHLGIN--ISGLGFMTSITFIFLVGVFMSSWLGA 87
+LPI L W + +DG P+ N GLG + ++ I+LVG+ +S++ G
Sbjct: 23 VLPIGAALGLLIWVFNIIDGLLKPVIEFF-FNWYFPGLGLLVTLVLIYLVGLILSNYFGK 81
Query: 88 SILSLGEWLIKKMPLISYIYSASKQISAAISPDQKTKAFKEVAIIRHPRIGESAIGFITS 147
IL + ++ K+P+ + +Y+++KQ+ + K +FKE ++ PR G ++ FIT+
Sbjct: 82 QILGWVDKILVKVPIFNQVYNSAKQVIETLGVSNKV-SFKEAVMVEFPRTGMHSLAFITN 140
Query: 148 TLILHGSSGQEELCCVF 164
S+G E+L V+
Sbjct: 141 ETT--NSAG-EKLYLVY 154
>UNIPROTKB|Q83BF1 [details] [associations]
symbol:CBU_1559 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR007462
Pfam:PF04367 HOGENOM:HOG000264416 OMA:KYIISMG RefSeq:NP_820542.1
GeneID:1209469 KEGG:cbu:CBU_1559 PATRIC:17931881
ProtClustDB:CLSK914863 BioCyc:CBUR227377:GJ7S-1539-MONOMER
Uniprot:Q83BF1
Length = 209
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 44/148 (29%), Positives = 82/148 (55%)
Query: 24 LFCGVIL-LPIAITFYLTWWFIHFVDGFFSPIYAH------LGINISGLGFMTSITFIFL 76
L G+++ LPI +TF + + + +DG + H G I GLG + +I IFL
Sbjct: 15 LIAGLLVWLPIWVTFIVIRFLVDLLDGTLKLLPYHYRPEQLFGHKIPGLGLVFTIIIIFL 74
Query: 77 VGVFMSSWLGASILSLGEWLIKKMPLISYIYSASKQISAAISPDQKTKAFKEVAIIRHPR 136
G+ +++++G ++ E ++ ++PL+ IY+A KQ++ A Q ++F++V +I +PR
Sbjct: 75 TGLLVTNFVGRYLIGWWERILARIPLVRSIYTAVKQVTHAFVQPQG-QSFRKVVLIEYPR 133
Query: 137 IGESAIGFITSTLILHGSSGQEELCCVF 164
G +I F+TS G +++ VF
Sbjct: 134 KGLWSIAFVTSNNF-QGLPFEDDALAVF 160
>TIGR_CMR|CBU_1559 [details] [associations]
symbol:CBU_1559 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR007462
Pfam:PF04367 HOGENOM:HOG000264416 OMA:KYIISMG RefSeq:NP_820542.1
GeneID:1209469 KEGG:cbu:CBU_1559 PATRIC:17931881
ProtClustDB:CLSK914863 BioCyc:CBUR227377:GJ7S-1539-MONOMER
Uniprot:Q83BF1
Length = 209
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 44/148 (29%), Positives = 82/148 (55%)
Query: 24 LFCGVIL-LPIAITFYLTWWFIHFVDGFFSPIYAH------LGINISGLGFMTSITFIFL 76
L G+++ LPI +TF + + + +DG + H G I GLG + +I IFL
Sbjct: 15 LIAGLLVWLPIWVTFIVIRFLVDLLDGTLKLLPYHYRPEQLFGHKIPGLGLVFTIIIIFL 74
Query: 77 VGVFMSSWLGASILSLGEWLIKKMPLISYIYSASKQISAAISPDQKTKAFKEVAIIRHPR 136
G+ +++++G ++ E ++ ++PL+ IY+A KQ++ A Q ++F++V +I +PR
Sbjct: 75 TGLLVTNFVGRYLIGWWERILARIPLVRSIYTAVKQVTHAFVQPQG-QSFRKVVLIEYPR 133
Query: 137 IGESAIGFITSTLILHGSSGQEELCCVF 164
G +I F+TS G +++ VF
Sbjct: 134 KGLWSIAFVTSNNF-QGLPFEDDALAVF 160
>UNIPROTKB|Q0C0Q5 [details] [associations]
symbol:HNE_1988 "Putative uncharacterized protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000158 GenomeReviews:CP000158_GR InterPro:IPR007462
Pfam:PF04367 eggNOG:COG2928 RefSeq:YP_760688.1 STRING:Q0C0Q5
GeneID:4290430 KEGG:hne:HNE_1988 PATRIC:32216819
HOGENOM:HOG000264416 OMA:KYIISMG
BioCyc:HNEP228405:GI69-2013-MONOMER Uniprot:Q0C0Q5
Length = 237
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 28 VILLPIAITFYLTWWFIHFVDGFFSPIY-------AHLGINISGLGFMTSITFIFLVGVF 80
+I LPI TF + + I+ +D P+ +L + G G + I F+ LVG
Sbjct: 35 LIALPIVATFVILEFLINLIDSRVVPLLPPSLRPETYLDYAVPGFGLIILILFLTLVGAV 94
Query: 81 MSSWLGASILSLGEWLIKKMPLISYIYSASKQISAAISPDQKTKAFKEVAIIRHPRIGES 140
+++LG + L + ++ ++P++ +YS KQI + +KEVA++ +PR G
Sbjct: 95 ATNFLGKFFVDLTDRVLTRVPVVRSVYSVFKQIRDVFQ-NNTAGQYKEVAMVEYPREGSW 153
Query: 141 AIGFITSTL 149
IGF+ +
Sbjct: 154 VIGFVAGPI 162
>UNIPROTKB|Q8EG72 [details] [associations]
symbol:SO_1736 "Uncharacterized protein" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR007462 Pfam:PF04367
RefSeq:NP_717346.1 DNASU:1169515 GeneID:1169515 KEGG:son:SO_1736
PATRIC:23523097 HOGENOM:HOG000294006 OMA:WLYGWIE
ProtClustDB:CLSK906400 Uniprot:Q8EG72
Length = 200
Score = 118 (46.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/133 (27%), Positives = 68/133 (51%)
Query: 23 TLFCGVI-LLPIAITFYLTWWFIHFVDGFFSPIYAHLGIN--ISGLGFMTSITFIFLVGV 79
TL G++ LLP+A++ +L W +DG I A +GIN G GF+ + +F VG+
Sbjct: 4 TLARGLMNLLPMALSLWLFWSLFVSLDGLGIFILALVGINQHFVGAGFLLVVAIVFAVGL 63
Query: 80 FMSSWLGASILSLGEWL---IKKMPLISYIYSASKQISAAISPDQKTKAFKEVAIIRHPR 136
S + I+ L W+ + + PL +Y + + I++ ++ + K ++ +++
Sbjct: 64 LFSV---SPIVWLYGWIERQLMRFPLFKSVYGSIRDIASLMNREGKPNT-QQTVLVKQAN 119
Query: 137 IGESAIGFI-TST 148
G +GFI T T
Sbjct: 120 -GGYVVGFIMTDT 131
>TIGR_CMR|SO_1736 [details] [associations]
symbol:SO_1736 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR007462
Pfam:PF04367 RefSeq:NP_717346.1 DNASU:1169515 GeneID:1169515
KEGG:son:SO_1736 PATRIC:23523097 HOGENOM:HOG000294006 OMA:WLYGWIE
ProtClustDB:CLSK906400 Uniprot:Q8EG72
Length = 200
Score = 118 (46.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/133 (27%), Positives = 68/133 (51%)
Query: 23 TLFCGVI-LLPIAITFYLTWWFIHFVDGFFSPIYAHLGIN--ISGLGFMTSITFIFLVGV 79
TL G++ LLP+A++ +L W +DG I A +GIN G GF+ + +F VG+
Sbjct: 4 TLARGLMNLLPMALSLWLFWSLFVSLDGLGIFILALVGINQHFVGAGFLLVVAIVFAVGL 63
Query: 80 FMSSWLGASILSLGEWL---IKKMPLISYIYSASKQISAAISPDQKTKAFKEVAIIRHPR 136
S + I+ L W+ + + PL +Y + + I++ ++ + K ++ +++
Sbjct: 64 LFSV---SPIVWLYGWIERQLMRFPLFKSVYGSIRDIASLMNREGKPNT-QQTVLVKQAN 119
Query: 137 IGESAIGFI-TST 148
G +GFI T T
Sbjct: 120 -GGYVVGFIMTDT 131
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.329 0.142 0.460 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 164 164 0.00088 107 3 11 22 0.41 31
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 617 (66 KB)
Total size of DFA: 164 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.99u 0.09s 15.08t Elapsed: 00:00:01
Total cpu time: 14.99u 0.09s 15.08t Elapsed: 00:00:01
Start: Thu May 9 14:11:04 2013 End: Thu May 9 14:11:05 2013