LCV3 protein (Arabidopsis thaliana)

STRING 9.05

LCV3 protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




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Your Input:
	LCV3	LCV3 (like cov 3); like cov 3 (LCV3); FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF502 (InterPro-IPR007462); BEST Arabidopsis thaliana protein match is- LCV1 (LIKE COV 1) (TAIR-AT2G20130.1); Has 1919 Blast hits to 1919 proteins in 363 species- Archae - 4; Bacteria - 686; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 1144 (source- NCBI BLink). (251 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT5G05657	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (137 aa)	•	0.873
	AT2G20150	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (90 aa)	•	0.716
	MYB59	MYB59 (MYB DOMAIN PROTEIN 59); DNA binding / transcription factor; Encodes a putative transcrip [...] (235 aa)	•	0.659
	GR-RBP8	GR-RBP8; RNA binding / nucleic acid binding / nucleotide binding; Encodes a glycine-rich protei [...] (169 aa)	•	0.561
	AT2G20140	26S protease regulatory complex subunit 4, putative; 26S protease regulatory complex subunit 4, [...] (443 aa)	•	0.538
	AT2G20110	tesmin/TSO1-like CXC domain-containing protein; tesmin/TSO1-like CXC domain-containing protein; [...] (578 aa)	•	0.536
	DIN10	DIN10 (DARK INDUCIBLE 10); hydrolase, hydrolyzing O-glycosyl compounds; encodes a member of gly [...] (749 aa)	•	0.510
	MYB111	MYB111 (MYB DOMAIN PROTEIN 111); DNA binding / transcription factor; Encodes a putative transcr [...] (256 aa)	•	0.508
	HCS2	HCS2 (holocarboxylase synthetase 2); biotin-[acetyl-CoA-carboxylase] ligase/ catalytic; holocar [...] (329 aa)	•	0.508
	PHS1	PHS1 (PROPYZAMIDE-HYPERSENSITIVE 1); phosphoprotein phosphatase/ protein tyrosine/serine/threon [...] (929 aa)	•	0.439

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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

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