Your job contains 1 sequence.
>039855
MSLKLSSTLNTSRRSFSSPLFFSNVKRTPISNIRIPRNRSVKSFTCVHERNPEPIATTST
KLQLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERG
RMRFRADSDSEISKGFCSCLIMVLDGAEPEEVLGFKTEDLTEMNVGVGVSHVGIKAGASR
VNTWQNVLLAMQKRTRCL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039855
(198 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2824065 - symbol:SUFE2 "sulfur E2" species:370... 490 8.8e-47 1
TAIR|locus:2157747 - symbol:QS "quinolinate synthase" spe... 385 6.9e-35 1
TAIR|locus:2131488 - symbol:CPSUFE "chloroplast sulfur E"... 178 3.9e-13 1
UNIPROTKB|P0AGF2 - symbol:csdE "CSD sulfur transfer prote... 152 5.8e-11 1
TIGR_CMR|SPO_2165 - symbol:SPO_2165 "Fe-S metabolism asso... 141 8.4e-10 1
UNIPROTKB|Q9KPQ6 - symbol:VC_2310 "Putative uncharacteriz... 122 8.7e-08 1
TIGR_CMR|VC_2310 - symbol:VC_2310 "conserved hypothetical... 122 8.7e-08 1
UNIPROTKB|Q8EAV1 - symbol:sufE "Sulfur acceptor protein f... 117 2.9e-07 1
TIGR_CMR|SO_3790 - symbol:SO_3790 "conserved hypothetical... 117 2.9e-07 1
UNIPROTKB|Q9EXP1 - symbol:sufE "Cysteine desulfuration pr... 116 3.8e-07 1
UNIPROTKB|P76194 - symbol:sufE "sulfur acceptor that acti... 108 3.1e-06 1
>TAIR|locus:2824065 [details] [associations]
symbol:SUFE2 "sulfur E2" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0008047
"enzyme activator activity" evidence=IDA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IC] [GO:0051176 "positive regulation of
sulfur metabolic process" evidence=IDA] Pfam:PF02657 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0016226 GO:GO:0008047
EMBL:AC008113 InterPro:IPR003808 eggNOG:COG2166 GO:GO:0051176
EMBL:BT029461 IPI:IPI00545764 RefSeq:NP_176947.1 UniGene:At.35599
ProteinModelPortal:Q9FXE3 SMR:Q9FXE3 STRING:Q9FXE3
EnsemblPlants:AT1G67810.1 GeneID:843107 KEGG:ath:AT1G67810
TAIR:At1g67810 HOGENOM:HOG000152586 InParanoid:Q9FXE3 OMA:FRSLTEP
PhylomeDB:Q9FXE3 ProtClustDB:CLSN2914479 Genevestigator:Q9FXE3
Uniprot:Q9FXE3
Length = 258
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 101/146 (69%), Positives = 118/146 (80%)
Query: 54 PIAT-TSTKLQLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWL 112
P+ T TS KL++LVSEF SLTEPIDRVKRLL+YAA L LDES R+ +V GC TQVWL
Sbjct: 69 PLGTKTSDKLRILVSEFRSLTEPIDRVKRLLNYAATLAPLDESARISENRVTGCTTQVWL 128
Query: 113 EVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAEPEEVLGFKTEDLTEMNVGVGVSHV 172
E+ MDE GRMRF+ADSDSEISKGFCSCLI +LDGA+PEEV+G ++EDL+EMNVGV H
Sbjct: 129 EIKMDEFGRMRFKADSDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGV---H- 184
Query: 173 GIKAGASRVNTWQNVLLAMQKRTRCL 198
G + SRVNTW NVL++MQKRT L
Sbjct: 185 GKEQ--SRVNTWHNVLMSMQKRTMTL 208
>TAIR|locus:2157747 [details] [associations]
symbol:QS "quinolinate synthase" species:3702
"Arabidopsis thaliana" [GO:0008987 "quinolinate synthetase A
activity" evidence=IEA;IGI;IMP] [GO:0009435 "NAD biosynthetic
process" evidence=IEA;IGI;IMP] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0008047 "enzyme activator activity"
evidence=IDA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0051176 "positive regulation of sulfur metabolic
process" evidence=IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IDA] [GO:0009060 "aerobic respiration"
evidence=IMP] [GO:0051347 "positive regulation of transferase
activity" evidence=IMP] InterPro:IPR003473 Pfam:PF02445
Pfam:PF02657 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
GO:GO:0042803 GO:GO:0009435 GO:GO:0051539 GO:GO:0016226
GO:GO:0009060 GO:GO:0008047 GO:GO:0051347 EMBL:AB024031
eggNOG:COG0379 KO:K03517 GO:GO:0008987 InterPro:IPR003808
EMBL:AY035115 EMBL:AY113860 EMBL:AY085553 IPI:IPI00542335
RefSeq:NP_199832.1 UniGene:At.7913 ProteinModelPortal:Q9FGS4
SMR:Q9FGS4 STRING:Q9FGS4 PaxDb:Q9FGS4 PRIDE:Q9FGS4
EnsemblPlants:AT5G50210.1 GeneID:835086 KEGG:ath:AT5G50210
TAIR:At5g50210 HOGENOM:HOG000265746 InParanoid:Q9FGS4 OMA:IADVGCE
PhylomeDB:Q9FGS4 ProtClustDB:PLN02673 ArrayExpress:Q9FGS4
Genevestigator:Q9FGS4 GO:GO:0051176 Uniprot:Q9FGS4
Length = 718
Score = 385 (140.6 bits), Expect = 6.9e-35, P = 6.9e-35
Identities = 77/138 (55%), Positives = 100/138 (72%)
Query: 61 KLQLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERG 120
KLQ LV EF SLTEPIDR+K +L YA++LP + ES + ++ +V GC +VWL+ + + G
Sbjct: 87 KLQRLVKEFKSLTEPIDRLKWVLHYASLLPQMPESSKTESNRVMGCTARVWLDAELGQDG 146
Query: 121 RMRFRADSDSEISKGFCSCLIMVLDGAEPEEVLGFKTEDLTEMNVGVGVSHVGIKAGASR 180
+MRF ADSDS++SKG CSCLI VLD A P EV+ KTEDL E+NVG+ + SR
Sbjct: 147 KMRFCADSDSDVSKGMCSCLIQVLDEASPVEVMELKTEDLAELNVGL------LGGERSR 200
Query: 181 VNTWQNVLLAMQKRTRCL 198
VNTW NVL++MQK+TR L
Sbjct: 201 VNTWYNVLVSMQKKTRRL 218
>TAIR|locus:2131488 [details] [associations]
symbol:CPSUFE "chloroplast sulfur E" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA;NAS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0008047 "enzyme activator activity" evidence=IGI;IDA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=IGI;RCA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009073
"aromatic amino acid family biosynthetic process" evidence=RCA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0019243 "methylglyoxal catabolic
process to D-lactate" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] Pfam:PF02657 GO:GO:0005739 GO:GO:0009570
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016226 EMBL:AL161565
eggNOG:COG0271 InterPro:IPR002634 Pfam:PF01722 SUPFAM:SSF82657
GO:GO:0008047 EMBL:AL022223 EMBL:BT004190 EMBL:BT021125
EMBL:AY084591 IPI:IPI00524714 PIR:T05054 RefSeq:NP_194380.1
UniGene:At.32175 HSSP:Q9D8S9 ProteinModelPortal:Q84W65 SMR:Q84W65
STRING:Q84W65 PaxDb:Q84W65 PRIDE:Q84W65 ProMEX:Q84W65
EnsemblPlants:AT4G26500.1 GeneID:828756 KEGG:ath:AT4G26500
TAIR:At4g26500 HOGENOM:HOG000241241 InParanoid:Q84W65 OMA:HALSIDA
PhylomeDB:Q84W65 ProtClustDB:CLSN2686029 Genevestigator:Q84W65
GermOnline:AT4G26500 InterPro:IPR003808 Uniprot:Q84W65
Length = 371
Score = 178 (67.7 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 48/142 (33%), Positives = 71/142 (50%)
Query: 53 EPIATTSTKLQLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWL 112
+PI KLQ +V F S+ EP + ++L+ Y L LD + + KV GC +QVW+
Sbjct: 78 QPIEELPPKLQEIVKLFQSVQEPKAKYEQLMFYGKNLTPLDSQFKTRENKVEGCVSQVWV 137
Query: 113 EVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAEPEEVLGFKTEDLTEMNVGVGVSHV 172
DE + + ADSDS ++KG + L+ L G E+L T D + +G+ S
Sbjct: 138 RAFFDEERNVVYEADSDSVLTKGLAALLVKGLSGRPVPEILRI-TPDFAVL-LGLQQS-- 193
Query: 173 GIKAGASRVNTWQNVLLAMQKR 194
SR N N+L MQK+
Sbjct: 194 ---LSPSRNNGLLNMLKLMQKK 212
>UNIPROTKB|P0AGF2 [details] [associations]
symbol:csdE "CSD sulfur transfer protein" species:83333
"Escherichia coli K-12" [GO:0016226 "iron-sulfur cluster assembly"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF02657 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U29581 GO:GO:0016226
InterPro:IPR003808 KO:K02426 eggNOG:COG2166 PIR:G65063
RefSeq:NP_417291.1 RefSeq:YP_491019.1 PDB:1NI7 PDBsum:1NI7
ProteinModelPortal:P0AGF2 SMR:P0AGF2 IntAct:P0AGF2 PRIDE:P0AGF2
EnsemblBacteria:EBESCT00000000362 EnsemblBacteria:EBESCT00000016753
GeneID:12932129 GeneID:947274 KEGG:ecj:Y75_p2748 KEGG:eco:b2811
PATRIC:32121038 EchoBASE:EB2892 EcoGene:EG13083
HOGENOM:HOG000285041 OMA:NWQERYR ProtClustDB:PRK15019
BioCyc:EcoCyc:G7455-MONOMER BioCyc:ECOL316407:JW2782-MONOMER
BioCyc:MetaCyc:G7455-MONOMER EvolutionaryTrace:P0AGF2
Genevestigator:P0AGF2 InterPro:IPR017763 TIGRFAMs:TIGR03391
Uniprot:P0AGF2
Length = 147
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 54 PIATTSTKLQLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLE 113
P TT T + L + F LT+ D+ ++L+ LP L + + QAK++AGC +VWL
Sbjct: 10 PFGTTVTA-ETLRNTFAPLTQWEDKYRQLIMLGKQLPALPDELKAQAKEIAGCENRVWLG 68
Query: 114 VVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAEPEEV 152
+ E G+M F DS+ I +G + L+ ++G E+
Sbjct: 69 YTVAENGKMHFFGDSEGRIVRGLLAVLLTAVEGKTAAEL 107
>TIGR_CMR|SPO_2165 [details] [associations]
symbol:SPO_2165 "Fe-S metabolism associated family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISS] Pfam:PF02657 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR003808 HOGENOM:HOG000285040
KO:K02426 OMA:KVQGCAS RefSeq:YP_167392.1 ProteinModelPortal:Q5LRG3
GeneID:3195531 KEGG:sil:SPO2165 PATRIC:23377677
ProtClustDB:CLSK933783 Uniprot:Q5LRG3
Length = 136
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 33/94 (35%), Positives = 54/94 (57%)
Query: 59 STKLQLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDE 118
S + +V +F+ L + DR + +++ ++ LDE+ +V A +V GCA+QVWL V+ E
Sbjct: 3 SPAFEEIVEDFEFLDDWEDRYRHVIEQGKLMDPLDEALKVPATRVHGCASQVWLHPVI-E 61
Query: 119 RGRMRFRADSDSEISKGFCSCLIMVLDGAEPEEV 152
G RF DSD+ I +G + L + +G EV
Sbjct: 62 GGVFRFDGDSDAMIVRGLIAVLRALYNGVPVAEV 95
>UNIPROTKB|Q9KPQ6 [details] [associations]
symbol:VC_2310 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF02657 EMBL:AE003852 GenomeReviews:AE003852_GR
InterPro:IPR003808 KO:K02426 OMA:NWQERYR InterPro:IPR017763
TIGRFAMs:TIGR03391 HSSP:Q46926 PIR:G82092 RefSeq:NP_231941.1
ProteinModelPortal:Q9KPQ6 DNASU:2613106 GeneID:2613106
KEGG:vch:VC2310 PATRIC:20083655 ProtClustDB:CLSK874753
Uniprot:Q9KPQ6
Length = 144
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 32/119 (26%), Positives = 65/119 (54%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFR-ADSDSEISKG 135
DR ++++ + +LP + E+ + + V+GC ++VWL V +++G F ADSD+ I +G
Sbjct: 31 DRYRQIIQWGKLLPVMPEALKSEQVLVSGCESEVWL--VAEQQGEQWFFCADSDARIVRG 88
Query: 136 FCSCLIMVLDGAEPEEVLGFKTEDLTEMNVGVGVSHVGIKAGASRVNTWQNVLLAMQKR 194
+ ++ L+G E+ F +D +G+ ++H+ SR N Q ++ +Q +
Sbjct: 89 LIAIVLAALNGKTSAEISAFSMDDYFA-ELGL-LAHLS----PSRGNGLQAIVATIQAK 141
>TIGR_CMR|VC_2310 [details] [associations]
symbol:VC_2310 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF02657
EMBL:AE003852 GenomeReviews:AE003852_GR InterPro:IPR003808
KO:K02426 OMA:NWQERYR InterPro:IPR017763 TIGRFAMs:TIGR03391
HSSP:Q46926 PIR:G82092 RefSeq:NP_231941.1 ProteinModelPortal:Q9KPQ6
DNASU:2613106 GeneID:2613106 KEGG:vch:VC2310 PATRIC:20083655
ProtClustDB:CLSK874753 Uniprot:Q9KPQ6
Length = 144
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 32/119 (26%), Positives = 65/119 (54%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFR-ADSDSEISKG 135
DR ++++ + +LP + E+ + + V+GC ++VWL V +++G F ADSD+ I +G
Sbjct: 31 DRYRQIIQWGKLLPVMPEALKSEQVLVSGCESEVWL--VAEQQGEQWFFCADSDARIVRG 88
Query: 136 FCSCLIMVLDGAEPEEVLGFKTEDLTEMNVGVGVSHVGIKAGASRVNTWQNVLLAMQKR 194
+ ++ L+G E+ F +D +G+ ++H+ SR N Q ++ +Q +
Sbjct: 89 LIAIVLAALNGKTSAEISAFSMDDYFA-ELGL-LAHLS----PSRGNGLQAIVATIQAK 141
>UNIPROTKB|Q8EAV1 [details] [associations]
symbol:sufE "Sulfur acceptor protein for iron-sulfur
cluster assembly SufE" species:211586 "Shewanella oneidensis MR-1"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF02657 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR003808 KO:K02426 HOGENOM:HOG000285041 OMA:NWQERYR
RefSeq:NP_719327.1 HSSP:Q46926 ProteinModelPortal:Q8EAV1
GeneID:1171434 KEGG:son:SO_3790 PATRIC:23527254
ProtClustDB:CLSK907339 Uniprot:Q8EAV1
Length = 147
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 24/92 (26%), Positives = 50/92 (54%)
Query: 65 LVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRF 124
L++ F+ +R ++++ LP L ++ R+++ +V GC + WL + ++ G+ +
Sbjct: 22 LLARFEQAPNWQERYRQIMLLGKTLPTLADAFRLESAQVKGCESDAWLYHI-EQGGKHYY 80
Query: 125 RADSDSEISKGFCSCLIMVLDGAEPEEVLGFK 156
ADSD+ I KG L+ G +++L F+
Sbjct: 81 LADSDTRIVKGLIGLLLSACHGKTQDQILAFE 112
>TIGR_CMR|SO_3790 [details] [associations]
symbol:SO_3790 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF02657 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR003808 KO:K02426 HOGENOM:HOG000285041 OMA:NWQERYR
RefSeq:NP_719327.1 HSSP:Q46926 ProteinModelPortal:Q8EAV1
GeneID:1171434 KEGG:son:SO_3790 PATRIC:23527254
ProtClustDB:CLSK907339 Uniprot:Q8EAV1
Length = 147
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 24/92 (26%), Positives = 50/92 (54%)
Query: 65 LVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRF 124
L++ F+ +R ++++ LP L ++ R+++ +V GC + WL + ++ G+ +
Sbjct: 22 LLARFEQAPNWQERYRQIMLLGKTLPTLADAFRLESAQVKGCESDAWLYHI-EQGGKHYY 80
Query: 125 RADSDSEISKGFCSCLIMVLDGAEPEEVLGFK 156
ADSD+ I KG L+ G +++L F+
Sbjct: 81 LADSDTRIVKGLIGLLLSACHGKTQDQILAFE 112
>UNIPROTKB|Q9EXP1 [details] [associations]
symbol:sufE "Cysteine desulfuration protein SufE"
species:198628 "Dickeya dadantii 3937" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_01832 InterPro:IPR023939
Pfam:PF02657 GO:GO:0005737 GO:GO:0016226 GO:GO:0006790
UniPathway:UPA00266 InterPro:IPR003808 EMBL:AJ301654 EMBL:CP002038
RefSeq:YP_003883472.1 ProteinModelPortal:Q9EXP1 SMR:Q9EXP1
IntAct:Q9EXP1 GeneID:9734154 GenomeReviews:CP002038_GR
KEGG:ddd:Dda3937_03664 PATRIC:42317769 HOGENOM:HOG000285040
KO:K02426 OMA:KVQGCAS BioCyc:DDAD198628:GHFQ-2768-MONOMER
Uniprot:Q9EXP1
Length = 138
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 63 QLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRM 122
Q L+ F + ++ +++ A L L ++ R +V+GC +QVW+++ +E+G +
Sbjct: 8 QKLLRNFSRCSNWEEKYLYIIELGAGLAPLSDAQRQDGNRVSGCQSQVWIDLASNEQGNV 67
Query: 123 RFRADSDSEISKGFCSCLIMVLDGAEPEEVL 153
DSD+ I KG + + + G E++
Sbjct: 68 VLHGDSDAAIVKGLIAIVFSLYQGLSVREIV 98
>UNIPROTKB|P76194 [details] [associations]
symbol:sufE "sulfur acceptor that activates SufS cysteine
desulfurase" species:83333 "Escherichia coli K-12" [GO:0043085
"positive regulation of catalytic activity" evidence=IDA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006790 "sulfur
compound metabolic process" evidence=IEA;IDA] [GO:0008047 "enzyme
activator activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_01832 InterPro:IPR023939 Pfam:PF02657
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016226 GO:GO:0008047 GO:GO:0006790
UniPathway:UPA00266 InterPro:IPR003808 HOGENOM:HOG000285040
KO:K02426 OMA:KVQGCAS PIR:G64925 RefSeq:NP_416194.1
RefSeq:YP_489941.1 PDB:1MZG PDBsum:1MZG ProteinModelPortal:P76194
SMR:P76194 DIP:DIP-10941N IntAct:P76194 PRIDE:P76194
EnsemblBacteria:EBESCT00000000882 EnsemblBacteria:EBESCT00000014876
GeneID:12931284 GeneID:946173 KEGG:ecj:Y75_p1654 KEGG:eco:b1679
PATRIC:32118664 EchoBASE:EB3719 EcoGene:EG13961 eggNOG:COG2166
ProtClustDB:PRK09296 BioCyc:EcoCyc:G6905-MONOMER
BioCyc:ECOL316407:JW1669-MONOMER EvolutionaryTrace:P76194
Genevestigator:P76194 Uniprot:P76194
Length = 138
Score = 108 (43.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 19/74 (25%), Positives = 40/74 (54%)
Query: 82 LLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLI 141
+++ LP L + R + GC +QVW+ + + +G + + DSD+ I KG + +
Sbjct: 27 IIELGQRLPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVF 86
Query: 142 MVLDGAEPEEVLGF 155
++ D P++++ F
Sbjct: 87 ILYDQMTPQDIVNF 100
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 198 186 0.00083 110 3 11 22 0.43 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 596 (63 KB)
Total size of DFA: 150 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.24u 0.10s 16.34t Elapsed: 00:00:01
Total cpu time: 16.24u 0.10s 16.34t Elapsed: 00:00:01
Start: Mon May 20 15:06:07 2013 End: Mon May 20 15:06:08 2013