BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039855
(198 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84W65|SUFE_ARATH SufE-like protein, chloroplastic OS=Arabidopsis thaliana GN=EMB1374
PE=1 SV=2
Length = 371
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 53 EPIATTSTKLQLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWL 112
+PI KLQ +V F S+ EP + ++L+ Y L LD + + KV GC +QVW+
Sbjct: 78 QPIEELPPKLQEIVKLFQSVQEPKAKYEQLMFYGKNLTPLDSQFKTRENKVEGCVSQVWV 137
Query: 113 EVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAEPEEVLGFKTEDLTEMNVGVGVSHV 172
DE + + ADSDS ++KG + L+ L G E+L T D V +G+
Sbjct: 138 RAFFDEERNVVYEADSDSVLTKGLAALLVKGLSGRPVPEILRI-TPDFA---VLLGLQQ- 192
Query: 173 GIKAGASRVNTWQNVLLAMQKRTRCL 198
SR N N+L MQK+ L
Sbjct: 193 --SLSPSRNNGLLNMLKLMQKKALHL 216
>sp|P74523|Y1419_SYNY3 Uncharacterized SufE-like protein slr1419 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr1419 PE=3 SV=1
Length = 159
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Query: 56 ATTSTKLQLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVV 115
AT L +V F T+P R ++LL Y L + E G++ A KV GC +QV++
Sbjct: 16 ATLPPNLAKIVERFQRHTDPKKRYEQLLWYGKKLEPMMEEGKIAANKVQGCVSQVYITAD 75
Query: 116 MDERGRMRFRADSDSEISKGFCSCLIMVLDGAEPEEVLGFKTEDLTEMNVGVGVSHVGIK 175
+ E G++ ++ DSD+++ KG + LI L+G P E++ T D E G+ VS
Sbjct: 76 L-EDGKVMYQGDSDAQLVKGLVALLIQGLNGLTPTEIVEL-TPDFIEA-TGLQVSLT--- 129
Query: 176 AGASRVNTWQNVLLAMQKR 194
SR N + N+ MQ +
Sbjct: 130 --PSRANGFYNIFKMMQTK 146
>sp|P0AGF2|YGDK_ECOLI Uncharacterized SufE-like protein YgdK OS=Escherichia coli (strain
K12) GN=ygdK PE=1 SV=1
Length = 147
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 51 NPE----PIATTSTKLQLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGC 106
NP+ P TT T + L + F LT+ D+ ++L+ LP L + + QAK++AGC
Sbjct: 3 NPQFAGHPFGTTVTA-ETLRNTFAPLTQWEDKYRQLIMLGKQLPALPDELKAQAKEIAGC 61
Query: 107 ATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAEPEEV 152
+VWL + E G+M F DS+ I +G + L+ ++G E+
Sbjct: 62 ENRVWLGYTVAENGKMHFFGDSEGRIVRGLLAVLLTAVEGKTAAEL 107
>sp|P0AGF3|YGDK_ECO57 Uncharacterized SufE-like protein YgdK OS=Escherichia coli O157:H7
GN=ygdK PE=3 SV=1
Length = 147
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 51 NPE----PIATTSTKLQLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGC 106
NP+ P TT T + L + F LT+ D+ ++L+ LP L + + QAK++AGC
Sbjct: 3 NPQFAGHPFGTTVTA-ETLRNTFAPLTQWEDKYRQLIMLGKQLPALPDELKAQAKEIAGC 61
Query: 107 ATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAEPEEV 152
+VWL + E G+M F DS+ I +G + L+ ++G E+
Sbjct: 62 ENRVWLGYTVAENGKMHFFGDSEGRIVRGLLAVLLTAVEGKTAAEL 107
>sp|Q7N3U6|SUFE_PHOLL Cysteine desulfuration protein SufE OS=Photorhabdus luminescens
subsp. laumondii (strain TT01) GN=sufE PE=3 SV=1
Length = 138
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGF 136
+R +++ A LP L + R +AGC +QVW+ + M+ + ++ F DSD+ I KG
Sbjct: 22 ERYLYMIELGAKLPPLTDEQRQPENLIAGCQSQVWILLRMNHQNKVEFIGDSDAAIVKGL 81
Query: 137 CSCLIMVLDGAEPEEVLGFKTEDLTE 162
+ + ++ G +E+L D+TE
Sbjct: 82 VAIVFILFQGKTTQEILDL---DVTE 104
>sp|Q52967|YA00_RHIME Uncharacterized SufE-like protein R01000 OS=Rhizobium meliloti
(strain 1021) GN=R01000 PE=3 SV=2
Length = 140
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 60 TKLQLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWL--EVVMD 117
T L ++ +F L E DR + +++ LP + E R KV GCA+QVWL D
Sbjct: 2 TSLDQIIDDFAFLDEWEDRYRYVIELGKNLPEMPEVSRTSENKVQGCASQVWLVTHATGD 61
Query: 118 -ERGRMRFRADSDSEISKGFCSCLIMVLDGAEPEEV 152
E + F +SD+ I +G + ++ + G E+
Sbjct: 62 AEDPLLTFEGESDAHIVRGLVAIVLAIFSGKRASEI 97
>sp|Q52742|Y1250_RHIEC Uncharacterized SufE-like protein RHE_CH01250 OS=Rhizobium etli
(strain CFN 42 / ATCC 51251) GN=RHE_CH01250 PE=3 SV=2
Length = 148
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 62 LQLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMD---E 118
L ++ +F L + DR + +++ LP L E R KV GCA+QVWL E
Sbjct: 12 LDQIIDDFVFLDDWEDRYRYVIELGKALPELAEEKRTPENKVMGCASQVWLVTHTSGDPE 71
Query: 119 RGRMRFRADSDSEISKGFCSCLIMVLDGAEPEEV 152
M F DSD+ I +G + ++ G E+
Sbjct: 72 NPIMSFEGDSDAHIVRGLVAIVLATYSGKPASEI 105
>sp|Q32F89|SUFE_SHIDS Cysteine desulfuration protein SufE OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=sufE PE=3 SV=1
Length = 138
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 41/74 (55%)
Query: 82 LLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLI 141
+++ LP L + GR + GC +QVW+ + + +G + + DSD+ I KG + +
Sbjct: 27 IIELGQRLPELRDEGRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVF 86
Query: 142 MVLDGAEPEEVLGF 155
++ D P++++ F
Sbjct: 87 ILYDQMMPQDIVNF 100
>sp|A1JPC1|SUFE_YERE8 Cysteine desulfuration protein SufE OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=sufE PE=3
SV=1
Length = 140
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGF 136
++ +++ A LP L E R ++GC +QVW+ + G++ F DSD+ I KG
Sbjct: 22 EKYLYVIELGAQLPPLTEQQRQPDNLISGCQSQVWIAMSTSTEGQVVFAGDSDAAIVKGL 81
Query: 137 CSCLIMVLDGAEPEEVL 153
+ ++ G P++++
Sbjct: 82 VVVVFILYQGLTPQQII 98
>sp|B7N515|SUFE_ECOLU Cysteine desulfuration protein SufE OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=sufE PE=3 SV=1
Length = 138
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC +QVW+ + + +G ++ + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSSQNSIQGCQSQVWIVMRQNAQGIIKLQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|Q0THF0|SUFE_ECOL5 Cysteine desulfuration protein SufE OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=sufE PE=3 SV=1
Length = 138
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + + + GC +QVW+ + + +G + + DSD+ I KG + +I++ D
Sbjct: 34 LPELRDEDKSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVIILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|Q9EXP1|SUFE_DICD3 Cysteine desulfuration protein SufE OS=Dickeya dadantii (strain
3937) GN=sufE PE=1 SV=1
Length = 138
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 63 QLLVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRM 122
Q L+ F + ++ +++ A L L ++ R +V+GC +QVW+++ +E+G +
Sbjct: 8 QKLLRNFSRCSNWEEKYLYIIELGAGLAPLSDAQRQDGNRVSGCQSQVWIDLASNEQGNV 67
Query: 123 RFRADSDSEISKGFCSCLIMVLDGAEPEEVL 153
DSD+ I KG + + + G E++
Sbjct: 68 VLHGDSDAAIVKGLIAIVFSLYQGLSVREIV 98
>sp|B5Z4B2|SUFE_ECO5E Cysteine desulfuration protein SufE OS=Escherichia coli O157:H7
(strain EC4115 / EHEC) GN=sufE PE=3 SV=1
Length = 138
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++V+ F
Sbjct: 94 PQDVVNF 100
>sp|Q7ADI5|SUFE_ECO57 Cysteine desulfuration protein SufE OS=Escherichia coli O157:H7
GN=sufE PE=3 SV=1
Length = 138
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++V+ F
Sbjct: 94 PQDVVNF 100
>sp|B1LE57|SUFE_ECOSM Cysteine desulfuration protein SufE OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=sufE PE=3 SV=1
Length = 138
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|P76194|SUFE_ECOLI Cysteine desulfuration protein SufE OS=Escherichia coli (strain
K12) GN=sufE PE=1 SV=1
Length = 138
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|B1IQ77|SUFE_ECOLC Cysteine desulfuration protein SufE OS=Escherichia coli (strain
ATCC 8739 / DSM 1576 / Crooks) GN=sufE PE=3 SV=1
Length = 138
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|A8A0M5|SUFE_ECOHS Cysteine desulfuration protein SufE OS=Escherichia coli O9:H4
(strain HS) GN=sufE PE=3 SV=1
Length = 138
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|B1XFY7|SUFE_ECODH Cysteine desulfuration protein SufE OS=Escherichia coli (strain K12
/ DH10B) GN=sufE PE=3 SV=1
Length = 138
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|C4ZYE1|SUFE_ECOBW Cysteine desulfuration protein SufE OS=Escherichia coli (strain K12
/ MC4100 / BW2952) GN=sufE PE=3 SV=1
Length = 138
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|B7NTV7|SUFE_ECO7I Cysteine desulfuration protein SufE OS=Escherichia coli O7:K1
(strain IAI39 / ExPEC) GN=sufE PE=3 SV=1
Length = 138
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|B7L5N1|SUFE_ECO55 Cysteine desulfuration protein SufE OS=Escherichia coli (strain
55989 / EAEC) GN=sufE PE=3 SV=1
Length = 138
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|Q321D8|SUFE_SHIBS Cysteine desulfuration protein SufE OS=Shigella boydii serotype 4
(strain Sb227) GN=sufE PE=3 SV=1
Length = 138
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSPQNSIQGCQNQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|B2U2I3|SUFE_SHIB3 Cysteine desulfuration protein SufE OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=sufE PE=3 SV=1
Length = 138
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + R + GC QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDRSPQNSIQGCQNQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|B7LQ97|SUFE_ESCF3 Cysteine desulfuration protein SufE OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sufE
PE=3 SV=1
Length = 138
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
+P L + + V GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 MPELHDEDKSPQNSVQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|B6IBB8|SUFE_ECOSE Cysteine desulfuration protein SufE OS=Escherichia coli (strain
SE11) GN=sufE PE=3 SV=1
Length = 138
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRAEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|B7M0N4|SUFE_ECO8A Cysteine desulfuration protein SufE OS=Escherichia coli O8 (strain
IAI1) GN=sufE PE=3 SV=1
Length = 138
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRAEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|A7ZME4|SUFE_ECO24 Cysteine desulfuration protein SufE OS=Escherichia coli O139:H28
(strain E24377A / ETEC) GN=sufE PE=3 SV=1
Length = 138
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L R + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRAEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|Q8FH55|SUFE_ECOL6 Cysteine desulfuration protein SufE OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=sufE PE=3 SV=1
Length = 138
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + + + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDKSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|B7MVF5|SUFE_ECO81 Cysteine desulfuration protein SufE OS=Escherichia coli O81 (strain
ED1a) GN=sufE PE=3 SV=1
Length = 138
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + + + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDKSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|B7US18|SUFE_ECO27 Cysteine desulfuration protein SufE OS=Escherichia coli O127:H6
(strain E2348/69 / EPEC) GN=sufE PE=3 SV=1
Length = 138
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + + + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDKSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|Q1RBB7|SUFE_ECOUT Cysteine desulfuration protein SufE OS=Escherichia coli (strain
UTI89 / UPEC) GN=sufE PE=3 SV=1
Length = 138
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + + + GC +QVW+ + + +G + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDKSPQNSIQGCQSQVWIVMRQNAQGIIELHGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|A1ABL7|SUFE_ECOK1 Cysteine desulfuration protein SufE OS=Escherichia coli O1:K1 /
APEC GN=sufE PE=3 SV=1
Length = 138
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + + + GC +QVW+ + + +G + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDKSPQNSIQGCQSQVWIVMRQNAQGIIELHGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|B7MA31|SUFE_ECO45 Cysteine desulfuration protein SufE OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=sufE PE=3 SV=1
Length = 138
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + + + GC +QVW+ + + +G + DSD+ I KG + + ++ D
Sbjct: 34 LPELRDEDKSPQNSIQGCQSQVWIVMRQNAQGIIELHGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|A7MF58|SUFE_CROS8 Cysteine desulfuration protein SufE OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=sufE PE=3 SV=1
Length = 138
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 45/91 (49%)
Query: 65 LVSEFDSLTEPIDRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRF 124
L+ F+ ++ +++ L LD++ R A ++ GC +QVW+ + E G +
Sbjct: 10 LLRNFNRCANWEEKYLYIIELGQRLAPLDDAERTPAHRIQGCQSQVWIVMNPGENGVIEM 69
Query: 125 RADSDSEISKGFCSCLIMVLDGAEPEEVLGF 155
R DSD+ I KG + + + ++++ F
Sbjct: 70 RGDSDAAIVKGLIAVVFALYQQMTAQDIVNF 100
>sp|B1JJ49|SUFE_YERPY Cysteine desulfuration protein SufE OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=sufE PE=3 SV=1
Length = 140
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGF 136
++ +++ L L E R ++GC +QVW+ + + G + F DSD+ I KG
Sbjct: 22 EKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMTLSAEGHVIFAGDSDAAIVKGL 81
Query: 137 CSCLIMVLDGAEPEEVL 153
+ + ++ P++++
Sbjct: 82 VAVVFILYHDLTPQQII 98
>sp|Q66A23|SUFE_YERPS Cysteine desulfuration protein SufE OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=sufE PE=3 SV=1
Length = 140
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGF 136
++ +++ L L E R ++GC +QVW+ + + G + F DSD+ I KG
Sbjct: 22 EKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMTLSAEGHVIFAGDSDAAIVKGL 81
Query: 137 CSCLIMVLDGAEPEEVL 153
+ + ++ P++++
Sbjct: 82 VAVVFILYHDLTPQQII 98
>sp|A4TIP3|SUFE_YERPP Cysteine desulfuration protein SufE OS=Yersinia pestis (strain
Pestoides F) GN=sufE PE=3 SV=1
Length = 140
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGF 136
++ +++ L L E R ++GC +QVW+ + + G + F DSD+ I KG
Sbjct: 22 EKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMTLSAEGHVIFAGDSDAAIVKGL 81
Query: 137 CSCLIMVLDGAEPEEVL 153
+ + ++ P++++
Sbjct: 82 VAVVFILYHDLTPQQII 98
>sp|Q1CIJ7|SUFE_YERPN Cysteine desulfuration protein SufE OS=Yersinia pestis bv. Antiqua
(strain Nepal516) GN=sufE PE=3 SV=1
Length = 140
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGF 136
++ +++ L L E R ++GC +QVW+ + + G + F DSD+ I KG
Sbjct: 22 EKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMTLSAEGHVIFAGDSDAAIVKGL 81
Query: 137 CSCLIMVLDGAEPEEVL 153
+ + ++ P++++
Sbjct: 82 VAVVFILYHDLTPQQII 98
>sp|A9QZC8|SUFE_YERPG Cysteine desulfuration protein SufE OS=Yersinia pestis bv. Antiqua
(strain Angola) GN=sufE PE=3 SV=1
Length = 140
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGF 136
++ +++ L L E R ++GC +QVW+ + + G + F DSD+ I KG
Sbjct: 22 EKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMTLSAEGHVIFAGDSDAAIVKGL 81
Query: 137 CSCLIMVLDGAEPEEVL 153
+ + ++ P++++
Sbjct: 82 VAVVFILYHDLTPQQII 98
>sp|Q74TH2|SUFE_YERPE Cysteine desulfuration protein SufE OS=Yersinia pestis GN=sufE PE=3
SV=2
Length = 140
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGF 136
++ +++ L L E R ++GC +QVW+ + + G + F DSD+ I KG
Sbjct: 22 EKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMTLSAEGHVIFAGDSDAAIVKGL 81
Query: 137 CSCLIMVLDGAEPEEVL 153
+ + ++ P++++
Sbjct: 82 VAVVFILYHDLTPQQII 98
>sp|B2K5J3|SUFE_YERPB Cysteine desulfuration protein SufE OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=sufE PE=3 SV=1
Length = 140
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGF 136
++ +++ L L E R ++GC +QVW+ + + G + F DSD+ I KG
Sbjct: 22 EKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMTLSAEGHVIFAGDSDAAIVKGL 81
Query: 137 CSCLIMVLDGAEPEEVL 153
+ + ++ P++++
Sbjct: 82 VAVVFILYHDLTPQQII 98
>sp|Q1C762|SUFE_YERPA Cysteine desulfuration protein SufE OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=sufE PE=3 SV=1
Length = 140
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGF 136
++ +++ L L E R ++GC +QVW+ + + G + F DSD+ I KG
Sbjct: 22 EKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMTLSAEGHVIFAGDSDAAIVKGL 81
Query: 137 CSCLIMVLDGAEPEEVL 153
+ + ++ P++++
Sbjct: 82 VAVVFILYHDLTPQQII 98
>sp|A7FHJ3|SUFE_YERP3 Cysteine desulfuration protein SufE OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=sufE PE=3 SV=1
Length = 140
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGF 136
++ +++ L L E R ++GC +QVW+ + + G + F DSD+ I KG
Sbjct: 22 EKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMTLSAEGHVIFAGDSDAAIVKGL 81
Query: 137 CSCLIMVLDGAEPEEVLGF 155
+ + ++ P++++
Sbjct: 82 VAVVFILYHDLTPQQIVSL 100
>sp|Q2NT14|SUFE_SODGM Cysteine desulfuration protein SufE OS=Sodalis glossinidius (strain
morsitans) GN=sufE PE=3 SV=1
Length = 138
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 77 DRVKRLLDYAAVLPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGF 136
++ +++ LP L R ++AGC +QVW+ + G ++ DSD+ I KG
Sbjct: 22 EKYLYIIELGGQLPPLSAEMRTPDNRIAGCQSQVWIVLSTQADGSVQLYGDSDAAIVKGL 81
Query: 137 CSCLIMVLDGAEPEEVLGF 155
+ + ++ G E++ +
Sbjct: 82 IAMVFILYQGLTLAEIVAY 100
>sp|A8AH79|SUFE_CITK8 Cysteine desulfuration protein SufE OS=Citrobacter koseri (strain
ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sufE PE=3 SV=1
Length = 138
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
L L+E R + GC +QVW+ + + G + + DSD+ I KG + + ++
Sbjct: 34 LAELNEQDRHSENSIQGCQSQVWIVMRQNADGVIELQGDSDAAIVKGLIAIVFILYHQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|Q3Z232|SUFE_SHISS Cysteine desulfuration protein SufE OS=Shigella sonnei (strain
Ss046) GN=sufE PE=3 SV=1
Length = 138
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
L L + R + GC +QVW+ + + G + + DSD+ I KG + + ++ D
Sbjct: 34 LTELRDEDRSPQNSIQGCQSQVWIVMRQNAHGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVSF 100
>sp|Q7C1E6|SUFE_SHIFL Cysteine desulfuration protein SufE OS=Shigella flexneri GN=sufE
PE=3 SV=1
Length = 138
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRAEDGSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|Q0T494|SUFE_SHIF8 Cysteine desulfuration protein SufE OS=Shigella flexneri serotype
5b (strain 8401) GN=sufE PE=3 SV=1
Length = 138
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 89 LPGLDESGRVQAKKVAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAE 148
LP L + GC +QVW+ + + +G + + DSD+ I KG + + ++ D
Sbjct: 34 LPELRAEDGSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMT 93
Query: 149 PEEVLGF 155
P++++ F
Sbjct: 94 PQDIVNF 100
>sp|B5XQH3|SUFE_KLEP3 Cysteine desulfuration protein SufE OS=Klebsiella pneumoniae
(strain 342) GN=sufE PE=3 SV=1
Length = 138
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 103 VAGCATQVWLEVVMDERGRMRFRADSDSEISKGFCSCLIMVLDGAEPEEVLGF 155
+ GC +QVW+ + D G + R DSD+ I KG + + ++ D ++++ F
Sbjct: 48 IQGCQSQVWIVMAQDPSGIITLRGDSDAAIVKGLIAVVFILYDRMTAQDIIEF 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,890,788
Number of Sequences: 539616
Number of extensions: 2514754
Number of successful extensions: 5889
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 5818
Number of HSP's gapped (non-prelim): 76
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)