Query         039857
Match_columns 285
No_of_seqs    176 out of 232
Neff          3.8 
Searched_HMMs 46136
Date          Fri Mar 29 02:41:09 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039857.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039857hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG2458 Endoplasmic reticulum  100.0 1.3E-96  3E-101  718.8  19.0  269   10-283    93-528 (528)
  2 PF05686 Glyco_transf_90:  Glyc 100.0 1.1E-74 2.4E-79  553.8  14.5  232   44-275     2-395 (395)
  3 smart00672 CAP10 Putative lipo 100.0 1.3E-31 2.8E-36  244.7   8.1  157   46-205    46-256 (256)
  4 PF13524 Glyco_trans_1_2:  Glyc  96.4  0.0076 1.6E-07   45.5   5.2   56  133-191    35-90  (92)
  5 PRK10307 putative glycosyl tra  82.2     2.7 5.8E-05   39.6   5.4   46  151-196   361-406 (412)
  6 TIGR02149 glgA_Coryne glycogen  63.2      14 0.00031   33.7   5.0   48  151-201   340-387 (388)
  7 TIGR02472 sucr_P_syn_N sucrose  62.2      11 0.00024   36.5   4.3   45  151-195   394-438 (439)
  8 PRK15427 colanic acid biosynth  61.4      20 0.00043   34.6   5.9   60  137-197   345-405 (406)
  9 cd03795 GT1_like_4 This family  60.0      12 0.00026   33.0   3.9   38  150-187   319-356 (357)
 10 TIGR03088 stp2 sugar transfera  59.8      18  0.0004   33.1   5.1   45  151-195   326-370 (374)
 11 TIGR03087 stp1 sugar transfera  57.8      17 0.00038   34.1   4.7   45  151-195   350-394 (397)
 12 cd03807 GT1_WbnK_like This fam  56.8      18 0.00039   31.1   4.3   41  151-191   320-360 (365)
 13 cd04955 GT1_like_6 This family  54.8      21 0.00045   31.7   4.5   42  153-194   320-361 (363)
 14 cd03825 GT1_wcfI_like This fam  53.8      26 0.00057   31.0   5.0   39  151-189   318-356 (365)
 15 cd04962 GT1_like_5 This family  52.9      28  0.0006   31.3   5.0   46  151-196   324-369 (371)
 16 cd03801 GT1_YqgM_like This fam  52.4      22 0.00048   30.2   4.1   45  150-194   328-372 (374)
 17 KOG1544 Predicted cysteine pro  51.7     6.1 0.00013   39.6   0.7   83   43-125    88-184 (470)
 18 PRK05749 3-deoxy-D-manno-octul  48.8      19 0.00041   34.3   3.5   31  151-181   376-406 (425)
 19 PRK15484 lipopolysaccharide 1,  47.2      36 0.00077   32.3   5.0   47  151-198   332-378 (380)
 20 cd03817 GT1_UGDG_like This fam  45.8      63  0.0014   28.0   6.0   42  139-182   321-362 (374)
 21 cd03808 GT1_cap1E_like This fa  45.4      32  0.0007   29.4   4.1   48  141-189   308-355 (359)
 22 PLN02871 UDP-sulfoquinovose:DA  45.4      32 0.00069   33.5   4.5   50  151-204   388-438 (465)
 23 cd03799 GT1_amsK_like This is   43.8      30 0.00066   30.5   3.8   38  150-187   314-351 (355)
 24 cd03794 GT1_wbuB_like This fam  43.0      32 0.00069   29.8   3.7   39  151-189   353-391 (394)
 25 cd05844 GT1_like_7 Glycosyltra  42.3      30 0.00066   31.0   3.6   41  151-191   324-364 (367)
 26 cd04946 GT1_AmsK_like This fam  38.6      42 0.00092   32.2   4.2   39  151-189   365-403 (407)
 27 cd03822 GT1_ecORF704_like This  37.8      47   0.001   29.1   4.0   37  151-188   322-358 (366)
 28 cd03792 GT1_Trehalose_phosphor  37.2      65  0.0014   29.8   5.0   56  137-195   314-369 (372)
 29 cd03821 GT1_Bme6_like This fam  36.3      43 0.00093   28.9   3.5   38  151-188   333-370 (375)
 30 TIGR03449 mycothiol_MshA UDP-N  32.8 1.2E+02  0.0026   28.2   6.0   49  139-189   345-393 (405)
 31 cd03800 GT1_Sucrose_synthase T  29.6      80  0.0017   28.6   4.2   40  151-190   356-395 (398)
 32 cd03796 GT1_PIG-A_like This fa  28.6      96  0.0021   29.2   4.7   50  151-203   321-370 (398)
 33 cd03823 GT1_ExpE7_like This fa  28.4      92   0.002   27.0   4.2   30  151-180   317-346 (359)
 34 cd03818 GT1_ExpC_like This fam  27.6      86  0.0019   29.4   4.2   36  151-186   354-389 (396)
 35 COG4641 Uncharacterized protei  27.4      52  0.0011   33.1   2.8   30  151-180   315-344 (373)
 36 cd03820 GT1_amsD_like This fam  27.0      87  0.0019   26.6   3.7   38  151-189   307-344 (348)
 37 PF09084 NMT1:  NMT1/THI5 like;  26.9      39 0.00084   28.6   1.6   17  151-167   200-216 (216)
 38 smart00648 SWAP Suppressor-of-  26.9      76  0.0016   22.5   2.9   35  165-199     6-53  (54)
 39 COG0715 TauA ABC-type nitrate/  26.5      44 0.00096   30.5   2.0   24  158-181   227-253 (335)
 40 KOG2458 Endoplasmic reticulum   26.3      35 0.00075   35.6   1.4   28   46-76    248-277 (528)
 41 cd06564 GH20_DspB_LnbB-like Gl  25.6 1.2E+02  0.0026   28.8   4.8   68  150-217    81-170 (326)
 42 COG1428 Deoxynucleoside kinase  23.8      65  0.0014   30.2   2.5   38  165-204   139-176 (216)
 43 cd03798 GT1_wlbH_like This fam  23.7 1.2E+02  0.0026   26.0   4.0   44  151-196   332-375 (377)
 44 PF05456 eIF_4EBP:  Eukaryotic   23.6      34 0.00073   29.2   0.6   22  227-249    50-72  (116)
 45 PF12240 Angiomotin_C:  Angiomo  23.5 1.2E+02  0.0026   28.3   4.2   34  250-283    55-92  (205)
 46 PF10685 KGG:  Stress-induced b  23.3      55  0.0012   20.6   1.4   16  159-174     2-17  (23)
 47 cd03813 GT1_like_3 This family  23.2 1.3E+02  0.0028   29.7   4.6   37  151-187   430-466 (475)
 48 PF12878 SICA_beta:  SICA extra  22.6      98  0.0021   27.6   3.3   61  160-234    64-135 (169)
 49 PF05920 Homeobox_KN:  Homeobox  21.6      95  0.0021   21.4   2.4   26  251-276     9-35  (40)
 50 KOG1247 Methionyl-tRNA synthet  21.2   1E+02  0.0023   32.2   3.6   99  165-282   456-565 (567)
 51 PHA01630 putative group 1 glyc  21.1 1.3E+02  0.0027   28.7   4.0   47  152-198   283-331 (331)
 52 KOG4564 Adenylate cyclase-coup  20.7      59  0.0013   33.6   1.8   14   42-55     82-95  (473)
 53 cd03819 GT1_WavL_like This fam  20.7 1.4E+02  0.0029   26.6   3.9   35  151-185   318-353 (355)

No 1  
>KOG2458 consensus Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif [General function prediction only]
Probab=100.00  E-value=1.3e-96  Score=718.82  Aligned_cols=269  Identities=50%  Similarity=0.951  Sum_probs=253.7

Q ss_pred             ccccccC---CCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCcchhhhcccccccccCCCHHHHhcccCCCcccc--
Q 039857           10 EYPLNCS---GGIRTNTNPGTYPTSYT--TKDEDHNGPAPSTCPDYFRWIHKDLRPWVHTGITREMIERGREPGYFRL--   82 (285)
Q Consensus        10 ~~pl~C~---~~~~~~tcp~~~~~~~~--~~~~~~~~~~~~~CP~yf~wi~~dl~PW~~~Gitr~~~e~a~~~a~fr~--   82 (285)
                      .+.|.|+   +.+.+.+||++.....+  -.++..  .+..+|||||||||+||+||++|||||+|+|+|+++|+||+  
T Consensus        93 ~~~l~cs~~s~~~~~~~~p~~~~~~s~~~~~~~~~--~~~~tCPDyfrWIheDL~Pw~etgItre~~erak~~a~fr~vI  170 (528)
T KOG2458|consen   93 RYRLYCSLFSGLKREVLCPSSHVSKSPYILKNPVY--HESCTCPDYFRWIHEDLCPWRETGITREMAERAKRKAHFRLVI  170 (528)
T ss_pred             hhhhhhhhhhcccccccccccccccCccccCCCCC--CCCCCCCcHHHHHHHhcCccccccchHHHhhhhhcccceeeee
Confidence            5568998   23679999998655533  123333  67889999999999999999999999999999999999997  


Q ss_pred             --------------------------------------------------------------------------------
Q 039857           83 --------------------------------------------------------------------------------   82 (285)
Q Consensus        83 --------------------------------------------------------------------------------   82 (285)
                                                                                                      
T Consensus       171 ~~g~~yv~~Y~ks~qtrd~ft~wgilqLlr~ypgklPDlElmf~~~D~P~v~~~~~~~~~~ppPlF~yCg~~~s~DIVfP  250 (528)
T KOG2458|consen  171 KEGRLYVENYRKSIQTRDVFTIWGILQLLRTYPGKLPDLELMFNCGDWPLVRKKDFQGTPPPPPLFSYCGSSESLDIVFP  250 (528)
T ss_pred             ecCceehhhhhhhhcccchHHHHHHHHHHHhcCCCCCCceeeeecCCccccchhhccCCCCCCCeEeecCCccccccccc
Confidence                                                                                            


Q ss_pred             -----------------------------------------ccchhh-hchhhhhhccCCCCCCcchhhhhhchHHHHhc
Q 039857           83 -----------------------------------------GNHEVS-WHRKELMKCNVSEGQDWSARLYSQNWNIEQRK  120 (285)
Q Consensus        83 -----------------------------------------GNp~v~-~~R~~L~~Cn~s~~~dw~ar~~~qdW~~e~~~  120 (285)
                                                               |||.|+ ++|.+||+||.|+.+|||||+|.|||.+|++.
T Consensus       251 dwsfwgw~e~nik~w~~~~~~~~egn~~~~W~~r~~yAywrGnp~v~e~~rl~ll~cn~s~~~d~~~~~y~qdw~~E~~~  330 (528)
T KOG2458|consen  251 DWSFWGWAEVNIKPWEKLLEDIVEGNKRPKWKNKNPYAYWRGNPSVAERLRLDLLSCNNSELVDANATLYFQDWSKESKL  330 (528)
T ss_pred             CccccCChhhcccccchHHHHHHhhccCCCcccCCceeEecCCCCccccchhhhhhcCCchhhchhhhhHHHhhhhhhhc
Confidence                                                     999997 99999999999999999999999999999999


Q ss_pred             C--CCcc---------------cccee---------------------ccCCCCCcceeeeccCCCCcccHHHHHHHhhh
Q 039857          121 A--SSNL---------------TWPAN---------------------VKTGLIPMHHYWPIMENDKCRSIKFAVDWGNN  162 (285)
Q Consensus       121 g--~S~L---------------aWSvS---------------------vyr~L~P~vHYwPIk~d~~c~dIk~aV~Wgn~  162 (285)
                      |  +|+|               |||||                     +||+|.||+|||||+++  |+||+|||+|||+
T Consensus       331 G~k~s~l~dqc~hrYkIyiEG~awsvs~kYilacDS~tL~v~p~YydfF~r~l~P~~HYwPIk~~--c~slkfaV~Wgn~  408 (528)
T KOG2458|consen  331 GFKQSNLFDQCKHRYKIYIEGTAWSVSEKYILACDSMTLKVKPEYYDFFYRGLQPWKHYWPIKSN--CRSLKFAVDWGNN  408 (528)
T ss_pred             cccccchhhhcceeeEEEEeeeeeeeecceeeecceeEEeecchHHHHHhhcccchhcccccccc--hhHHHHHHHhccc
Confidence            9  9999               99999                     19999999999999998  9999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcccCCCcCCCccccccccccCCcchHHHhHHhhhhccCCCC
Q 039857          163 HTETAQGLGKAASKFVQEELKLDNVYDYMFHLLNHYSKLLRYQPTIPPKADEYCAETLGCPEEGLARKFMEESFVKSPKE  242 (285)
Q Consensus       163 hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~EYAKLlkykP~vp~~a~Evc~esm~C~~~g~~r~fm~eS~v~~p~~  242 (285)
                      |+++||+||++||+||+++|+|++|||||||||+||||||+|||+||+||+|||+|+|+|+++|++|+||++|||+ ||+
T Consensus       409 h~~~Aq~Igk~gs~f~r~~L~m~~vYdYmfhllqeYakL~k~kpevp~~a~evc~~~m~cp~~g~~r~~m~~slv~-ps~  487 (528)
T KOG2458|consen  409 HDEEAQKIGKEGSEFARKNLKMDYVYDYMFHLLQEYAKLQKFKPEVPEGATEVCPETMACPEDGRERKFMDESLVM-PSD  487 (528)
T ss_pred             ChHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHhhcCCcCCCCccccCchhccCCccchhhhhhhhcccc-ccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999998 999


Q ss_pred             CCCCCCCCCCChhHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 039857          243 TSPCTLPPPYDPISLHDVLWGEKKSVLQVESWTRAYWETQT  283 (285)
Q Consensus       243 ~~PC~~ppp~~~~~l~~~~~rk~~~~~qVe~we~~~w~~~~  283 (285)
                      ++||.|||||++.+|++|++||+++++|||+||++||++|+
T Consensus       488 ~~pC~~p~p~~~~~l~~~~~~k~~~~~~ve~we~~y~~~~~  528 (528)
T KOG2458|consen  488 TAPCEMPPPYDPNELKEFLEKKESTTRQVEKWENKYWQKQN  528 (528)
T ss_pred             cCcccCCCCCCcHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999875


No 2  
>PF05686 Glyco_transf_90:  Glycosyl transferase family 90;  InterPro: IPR006598  Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=100.00  E-value=1.1e-74  Score=553.81  Aligned_cols=232  Identities=44%  Similarity=0.865  Sum_probs=224.1

Q ss_pred             CCCCCCcchhhhcccccccccCCCHHHHhcccCCCcccc-----------------------------------------
Q 039857           44 PSTCPDYFRWIHKDLRPWVHTGITREMIERGREPGYFRL-----------------------------------------   82 (285)
Q Consensus        44 ~~~CP~yf~wi~~dl~PW~~~Gitr~~~e~a~~~a~fr~-----------------------------------------   82 (285)
                      +.+||+||+|||+||+||+++||||++|++|++.++||+                                         
T Consensus         2 ~~~cp~~f~~I~~dl~~w~~~gIt~~~l~~~~~~~~~r~~I~~g~lYv~~~~~~~~tR~~~t~~~l~~ll~~~p~~lPD~   81 (395)
T PF05686_consen    2 NSQCPDYFRQIHRDLAPWRETGITREMLDRARRRAMFRYVIKDGRLYVESYREMFQTRDMFTLWGLLQLLRRYPGRLPDV   81 (395)
T ss_pred             CCCCCccHHHHHHHHHHhhcCCCCHHHHHHHHhcCceEEEEECCEEEEEecccccchhHHHHHHHHHHHHHhCcCCCCCe
Confidence            569999999999999999999999999999999999996                                         


Q ss_pred             --------------------------------------------------------------------------------
Q 039857           83 --------------------------------------------------------------------------------   82 (285)
Q Consensus        83 --------------------------------------------------------------------------------   82 (285)
                                                                                                      
T Consensus        82 Ef~~n~~D~P~~~~~~~~~~~~~~~Pifs~~~~~~~~DIl~Pd~~fwgw~e~~i~~w~~~~~~i~~~~~~~pW~~K~p~a  161 (395)
T PF05686_consen   82 EFMFNCDDWPVVRKDDYQGPSAPPPPIFSYCKSSDTADILFPDFSFWGWPEINIGPWDEDRKDIKEGNERVPWEDKKPKA  161 (395)
T ss_pred             eEEeECCCCccccccccCCCCcchhhheeeccccCcCccccCCccccccccccCCchHHHhhhhhccccCCChhhcccce
Confidence                                                                                            


Q ss_pred             ---ccchhhhchhhhhhccCCCCCCcchhhhhhchHHHHhcC--CCcc---------------ccceec-----------
Q 039857           83 ---GNHEVSWHRKELMKCNVSEGQDWSARLYSQNWNIEQRKA--SSNL---------------TWPANV-----------  131 (285)
Q Consensus        83 ---GNp~v~~~R~~L~~Cn~s~~~dw~ar~~~qdW~~e~~~g--~S~L---------------aWSvSv-----------  131 (285)
                         ||+.++.+|.+|++||.+...+|+|+|+.|||..+...|  .++|               +||+++           
T Consensus       162 fWRG~~~~~~~R~~L~~~~~~~~~~~~a~i~~~d~~~~~~~~~~~~~l~~~~~yKYli~idG~~~S~RlkylL~c~SvVl  241 (395)
T PF05686_consen  162 FWRGSPTVAETRQRLVRCSRSHPDLWDARITKQDWDKEYKPGFKHVPLEDQCKYKYLIYIDGNAWSGRLKYLLACNSVVL  241 (395)
T ss_pred             EECCCcCCCcchhHHHHHhccCCccceeeechhhhhhhccccccccCHHHHhhhheeecCCCceeehhHHHHHcCCceEE
Confidence               999999999999999999888999999999999999888  6776               788871           


Q ss_pred             ----------cCCCCCcceeeeccCCCCcccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhh
Q 039857          132 ----------KTGLIPMHHYWPIMENDKCRSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLLNHYSKL  201 (285)
Q Consensus       132 ----------yr~L~P~vHYwPIk~d~~c~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~EYAKL  201 (285)
                                |++|+||+|||||+.+..|+||+++|+|+++||++|++||++|++|++++|+|++|||||+|||+|||||
T Consensus       242 ~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~Y~~~LL~eYa~l  321 (395)
T PF05686_consen  242 KVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVEWLNAHDDEAQRIAENGQRFAREYLTMEDVYCYWRRLLLEYAKL  321 (395)
T ss_pred             EeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhhhcccChHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence                      9999999999999997779999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCcCCCccccccccccCCcchHHHhHHhhhhccCCCCCCCCCCCCCCChhHHHHHHHhhhhHHHHHHHHH
Q 039857          202 LRYQPTIPPKADEYCAETLGCPEEGLARKFMEESFVKSPKETSPCTLPPPYDPISLHDVLWGEKKSVLQVESWT  275 (285)
Q Consensus       202 lkykP~vp~~a~Evc~esm~C~~~g~~r~fm~eS~v~~p~~~~PC~~ppp~~~~~l~~~~~rk~~~~~qVe~we  275 (285)
                      |+|+|+++++|+|||+|+|+|+++|++|+||++|+|++|+++.||+|||||+|++|++|++||+++++|||+||
T Consensus       322 ~~~~p~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (395)
T PF05686_consen  322 LRFKPTVPPGAEEVCPESMACPAEGRERKFMMESMVKSPSDTDPCTMPPPYDPEELKEFLERKENVIRQVEKWE  395 (395)
T ss_pred             hCCCCcCCCCceEechhhcCCCcccchhhHHHHhhccCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999997


No 3  
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=99.97  E-value=1.3e-31  Score=244.74  Aligned_cols=157  Identities=41%  Similarity=0.809  Sum_probs=129.5

Q ss_pred             CCCC--cc-hhhhcccccccccCCCHHHHhccc--------CCCccccccchhhhchhhhhhccCCCCCCcchhhhhhch
Q 039857           46 TCPD--YF-RWIHKDLRPWVHTGITREMIERGR--------EPGYFRLGNHEVSWHRKELMKCNVSEGQDWSARLYSQNW  114 (285)
Q Consensus        46 ~CP~--yf-~wi~~dl~PW~~~Gitr~~~e~a~--------~~a~fr~GNp~v~~~R~~L~~Cn~s~~~dw~ar~~~qdW  114 (285)
                      --|+  || +|++..++||...   +..++++.        ..-.|..||+.++..|+.|++|+.+....|+|.+..|+|
T Consensus        46 l~P~~~~w~~w~~~~~~~~~~~---~~~~~~~~~~~pW~~K~~~a~WRG~~~~~~~R~~Lv~~~~~~p~~~da~~~~~~~  122 (256)
T smart00672       46 VFPDWSFWAGWPEVNGRPWDKD---LMELEEGNKRTKWSDKNAYAYWRGNPTVASERLDLIKCNQSSPELVNARITIQDW  122 (256)
T ss_pred             EecCHHHhCCCccccCcchHHH---HHHHHhhhcCCCccccCcCccccCCCCCCcchHHHHHHhcCCcccceeEEEEecC
Confidence            4666  78 8899999999853   33344332        233344599999878999999998877789999999999


Q ss_pred             H-----HHHhcC--CCcc---------------ccceec---------------------cCCCCCcceeeeccCCCCcc
Q 039857          115 N-----IEQRKA--SSNL---------------TWPANV---------------------KTGLIPMHHYWPIMENDKCR  151 (285)
Q Consensus       115 ~-----~e~~~g--~S~L---------------aWSvSv---------------------yr~L~P~vHYwPIk~d~~c~  151 (285)
                      .     .+...+  ...+               +||.++                     |++|+||+|||||+.|.+++
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~~~S~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~sd~  202 (256)
T smart00672      123 PGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGVAWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCR  202 (256)
T ss_pred             CCCChHHhcccCcCCCCHHHHhhcceEEecCCccchhhHHHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCCchh
Confidence            6     344334  3333               565551                     89999999999999998767


Q ss_pred             cHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcccC
Q 039857          152 SIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLLNHYSKLLRYQ  205 (285)
Q Consensus       152 dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~EYAKLlkyk  205 (285)
                      ||.++|+|+++||++||+||++|++|++++|+|++++|||++||+||||||+|+
T Consensus       203 ~l~~~i~~~~~~~~~a~~Ia~~~~~~~~~~L~~~~~~~Y~~~ll~eya~l~~~~  256 (256)
T smart00672      203 ELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSMEDVYDYMFHLLQEYAKLLKYK  256 (256)
T ss_pred             hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHhccC
Confidence            799999999999999999999999999999999999999999999999999996


No 4  
>PF13524 Glyco_trans_1_2:  Glycosyl transferases group 1
Probab=96.38  E-value=0.0076  Score=45.53  Aligned_cols=56  Identities=9%  Similarity=0.064  Sum_probs=47.7

Q ss_pred             CCCCCcceeeeccCCCCcccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHH
Q 039857          133 TGLIPMHHYWPIMENDKCRSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYM  191 (285)
Q Consensus       133 r~L~P~vHYwPIk~d~~c~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm  191 (285)
                      .-+.+..|++-+. +.  +++.++|++..+||++.++||++|+++|+++.+-+.+-+++
T Consensus        35 ~~~~~~~~~~~~~-~~--~el~~~i~~ll~~~~~~~~ia~~a~~~v~~~~t~~~~~~~i   90 (92)
T PF13524_consen   35 EIFEDGEHIITYN-DP--EELAEKIEYLLENPEERRRIAKNARERVLKRHTWEHRAEQI   90 (92)
T ss_pred             HHcCCCCeEEEEC-CH--HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            4477788999998 33  78999999999999999999999999999998877665544


No 5  
>PRK10307 putative glycosyl transferase; Provisional
Probab=82.23  E-value=2.7  Score=39.56  Aligned_cols=46  Identities=15%  Similarity=0.190  Sum_probs=40.6

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLLN  196 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~  196 (285)
                      ++|.++|...-+++++.+.++++|.+++.++++.+.+..-|..+++
T Consensus       361 ~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~  406 (412)
T PRK10307        361 EALVAAIAALARQALLRPKLGTVAREYAERTLDKENVLRQFIADIR  406 (412)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence            6799999999999999999999999999999999988886655544


No 6  
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=63.17  E-value=14  Score=33.74  Aligned_cols=48  Identities=21%  Similarity=0.270  Sum_probs=39.3

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhh
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLLNHYSKL  201 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~EYAKL  201 (285)
                      .+|.++|.-..+++++.++++++|++++.++.+.+.+..   .+++-|.++
T Consensus       340 ~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~---~~~~~y~~~  387 (388)
T TIGR02149       340 AELAKAINILLADPELAKKMGIAGRKRAEEEFSWGSIAK---KTVEMYRKV  387 (388)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHH---HHHHHHHhh
Confidence            578999998889999999999999999999988777655   455555554


No 7  
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=62.24  E-value=11  Score=36.45  Aligned_cols=45  Identities=13%  Similarity=0.093  Sum_probs=38.5

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLL  195 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL  195 (285)
                      .+|..+|...-++++.+++++++|.+++.++.+.+.+..=+..||
T Consensus       394 ~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~  438 (439)
T TIGR02472       394 EAIASALEDALSDSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL  438 (439)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence            679999999999999999999999999999999777666555554


No 8  
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=61.36  E-value=20  Score=34.59  Aligned_cols=60  Identities=17%  Similarity=0.186  Sum_probs=45.2

Q ss_pred             CcceeeeccCCCCcccHHHHHHHhhh-cHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Q 039857          137 PMHHYWPIMENDKCRSIKFAVDWGNN-HTETAQGLGKAASKFVQEELKLDNVYDYMFHLLNH  197 (285)
Q Consensus       137 P~vHYwPIk~d~~c~dIk~aV~Wgn~-hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~E  197 (285)
                      ....-+=+..++ -.+|.++|...-+ ++++.++++++|++++.++.+.+.+..=+.++|++
T Consensus       345 ~~~~G~lv~~~d-~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~  405 (406)
T PRK15427        345 ADKSGWLVPEND-AQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA  405 (406)
T ss_pred             CCCceEEeCCCC-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence            334434444433 2679999988888 99999999999999999999988877766666543


No 9  
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=59.96  E-value=12  Score=33.02  Aligned_cols=38  Identities=24%  Similarity=0.237  Sum_probs=34.0

Q ss_pred             cccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcch
Q 039857          150 CRSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNV  187 (285)
Q Consensus       150 c~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~V  187 (285)
                      ..++.++|....+++++.++++++|++++.++.+.+.+
T Consensus       319 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~  356 (357)
T cd03795         319 PAALAEAIRRLLEDPELRERLGEAARERAEEEFTADRM  356 (357)
T ss_pred             HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcchHhh
Confidence            36899999999999999999999999999998887653


No 10 
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=59.78  E-value=18  Score=33.08  Aligned_cols=45  Identities=9%  Similarity=0.070  Sum_probs=38.2

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLL  195 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL  195 (285)
                      ++|.++|...-++++..+.++++|++++.++++.+.+..-+..+.
T Consensus       326 ~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y  370 (374)
T TIGR03088       326 VALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAGLY  370 (374)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            689999999999999999999999999999999888766444443


No 11 
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=57.80  E-value=17  Score=34.13  Aligned_cols=45  Identities=18%  Similarity=0.081  Sum_probs=37.7

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLL  195 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL  195 (285)
                      .++.++|...-++++.++++|++|++++.++.+.+.+..=+..+|
T Consensus       350 ~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l  394 (397)
T TIGR03087       350 ADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLDALL  394 (397)
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence            789999999999999999999999999999988776655444443


No 12 
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=56.83  E-value=18  Score=31.15  Aligned_cols=41  Identities=17%  Similarity=0.250  Sum_probs=35.8

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYM  191 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm  191 (285)
                      +++..+|...-+++++.++++++|.+++.++.+++.+..=+
T Consensus       320 ~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~  360 (365)
T cd03807         320 EALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAY  360 (365)
T ss_pred             HHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            68999999999999999999999999999998877665433


No 13 
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=54.82  E-value=21  Score=31.74  Aligned_cols=42  Identities=17%  Similarity=0.202  Sum_probs=35.7

Q ss_pred             HHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHH
Q 039857          153 IKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHL  194 (285)
Q Consensus       153 Ik~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hL  194 (285)
                      +.++|++..++++..++++++|.+++.++++.+.+..=+..+
T Consensus       320 l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~  361 (363)
T cd04955         320 LASLLEELEADPEEVSAMAKAARERIREKYTWEKIADQYEEL  361 (363)
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            999999999999999999999999998888877765544333


No 14 
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=53.75  E-value=26  Score=31.03  Aligned_cols=39  Identities=15%  Similarity=0.311  Sum_probs=33.9

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYD  189 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~Vyc  189 (285)
                      .++..+|....+++++..+++++|++++.++.+.+.+..
T Consensus       318 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~  356 (365)
T cd03825         318 EDLAEGIEWLLADPDEREELGEAARELAENEFDSRVQAK  356 (365)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence            679999999899999999999999999988887766544


No 15 
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=52.90  E-value=28  Score=31.34  Aligned_cols=46  Identities=13%  Similarity=-0.009  Sum_probs=39.4

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLLN  196 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~  196 (285)
                      .++..+|...-+++++-++++++|.+++.++.+.+.+..-|..+++
T Consensus       324 ~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~  369 (371)
T cd04962         324 EAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERIVPQYEALYR  369 (371)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            6788889888889999999999999999999998888776666554


No 16 
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. 
Probab=52.37  E-value=22  Score=30.18  Aligned_cols=45  Identities=22%  Similarity=0.144  Sum_probs=38.0

Q ss_pred             cccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHH
Q 039857          150 CRSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHL  194 (285)
Q Consensus       150 c~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hL  194 (285)
                      ..+|.++|....++++..++++++|.+++.++++.+.+..=+..+
T Consensus       328 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (374)
T cd03801         328 PEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTEEV  372 (374)
T ss_pred             HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHh
Confidence            378999999999999999999999999999998888776544433


No 17 
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only]
Probab=51.74  E-value=6.1  Score=39.59  Aligned_cols=83  Identities=16%  Similarity=0.303  Sum_probs=55.9

Q ss_pred             CCCCCCCcchhhhc---cccccccc---C-------CCHHHHhcccCCCccccccchhhhchhhhhhccCCCCCCcchhh
Q 039857           43 APSTCPDYFRWIHK---DLRPWVHT---G-------ITREMIERGREPGYFRLGNHEVSWHRKELMKCNVSEGQDWSARL  109 (285)
Q Consensus        43 ~~~~CP~yf~wi~~---dl~PW~~~---G-------itr~~~e~a~~~a~fr~GNp~v~~~R~~L~~Cn~s~~~dw~ar~  109 (285)
                      .+.-||||+..-.+   |+.||..-   |       +-.+--++--=...|++-.-.+.-+|.||+-=-.....-|.|+-
T Consensus        88 ~sDCCPDf~~fCRg~pp~~Qp~~gc~~gg~~y~~G~t~~~NCn~CTC~n~qWKCdq~~CLv~Pd~iE~in~G~YgW~A~N  167 (470)
T KOG1544|consen   88 VSDCCPDFWDFCRGVPPPFQPIQGCMHGGRIYPVGGTYWDNCNRCTCQNRQWKCDQEPCLVDPDMIEAINQGNYGWQAGN  167 (470)
T ss_pred             CcccCcCHHHHhcCCCCCCCChhhcccCceecccCCeeeccccceeecCCceecCCceeecCHHHHHHHhcCCccccccc
Confidence            35579999999886   99999631   1       11111111111334555555677788888875555667899999


Q ss_pred             hhhchHHHHhcC-CCcc
Q 039857          110 YSQNWNIEQRKA-SSNL  125 (285)
Q Consensus       110 ~~qdW~~e~~~g-~S~L  125 (285)
                      |.|=|+.--..| .-.|
T Consensus       168 YSaFWGmtL~DGiKyRL  184 (470)
T KOG1544|consen  168 YSAFWGMTLDDGIKYRL  184 (470)
T ss_pred             hhhhhcccccccceeee
Confidence            999999998888 6666


No 18 
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=48.77  E-value=19  Score=34.29  Aligned_cols=31  Identities=19%  Similarity=0.341  Sum_probs=28.3

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHh
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEE  181 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~  181 (285)
                      ++|.++|...-++++.++++|++|.+++.++
T Consensus       376 ~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~  406 (425)
T PRK05749        376 EDLAKAVTYLLTDPDARQAYGEAGVAFLKQN  406 (425)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC
Confidence            5788999888899999999999999999877


No 19 
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=47.18  E-value=36  Score=32.29  Aligned_cols=47  Identities=15%  Similarity=0.195  Sum_probs=40.1

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLLNHY  198 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~EY  198 (285)
                      ++|.++|....++++. .+++++|++++.++.+.+.+..=+..+|+.|
T Consensus       332 ~~la~~I~~ll~d~~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~  378 (380)
T PRK15484        332 DSIISDINRTLADPEL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNW  378 (380)
T ss_pred             HHHHHHHHHHHcCHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence            6899999999888876 7899999999999999888887777776655


No 20 
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=45.77  E-value=63  Score=28.01  Aligned_cols=42  Identities=14%  Similarity=0.025  Sum_probs=34.0

Q ss_pred             ceeeeccCCCCcccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhc
Q 039857          139 HHYWPIMENDKCRSIKFAVDWGNNHTETAQGLGKAASKFVQEEL  182 (285)
Q Consensus       139 vHYwPIk~d~~c~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L  182 (285)
                      .+-+-+..++.  +|.++|....++++..++++++|.+++.++.
T Consensus       321 ~~g~~~~~~~~--~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~  362 (374)
T cd03817         321 ENGFLFPPGDE--ALAEALLRLLQDPELRRRLSKNAEESAEKFS  362 (374)
T ss_pred             ceeEEeCCCCH--HHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence            44455555442  8999999999999999999999999997654


No 21 
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=45.43  E-value=32  Score=29.40  Aligned_cols=48  Identities=21%  Similarity=0.215  Sum_probs=38.7

Q ss_pred             eeeccCCCCcccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHH
Q 039857          141 YWPIMENDKCRSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYD  189 (285)
Q Consensus       141 YwPIk~d~~c~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~Vyc  189 (285)
                      -+-+..++ -.++.++|+...++++..++++++|.+++.++.+.+.+..
T Consensus       308 g~~~~~~~-~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~  355 (359)
T cd03808         308 GFLVPPGD-AEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVK  355 (359)
T ss_pred             eEEECCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence            34454443 3679999999999999999999999999999988777654


No 22 
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=45.39  E-value=32  Score=33.51  Aligned_cols=50  Identities=20%  Similarity=0.181  Sum_probs=38.6

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH-HHHhhccc
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLLN-HYSKLLRY  204 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~-EYAKLlky  204 (285)
                      .+|.++|...-++++..++++++|.+++ ++.+-+.+..   .|++ .|.+++++
T Consensus       388 ~~la~~i~~ll~~~~~~~~~~~~a~~~~-~~fsw~~~a~---~l~~~~Y~~~~~~  438 (465)
T PLN02871        388 DDCVEKLETLLADPELRERMGAAAREEV-EKWDWRAATR---KLRNEQYSAAIWF  438 (465)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHH-HhCCHHHHHH---HHHHHHHHHHHHH
Confidence            6788999999999999999999999998 4555444333   6666 48777765


No 23 
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=43.84  E-value=30  Score=30.50  Aligned_cols=38  Identities=18%  Similarity=0.238  Sum_probs=33.7

Q ss_pred             cccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcch
Q 039857          150 CRSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNV  187 (285)
Q Consensus       150 c~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~V  187 (285)
                      ..++.++|...-+++++..+++++|++++.++.+.+.+
T Consensus       314 ~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~  351 (355)
T cd03799         314 PEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQ  351 (355)
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHH
Confidence            37899999999999999999999999999988876654


No 24 
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen.  It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=43.02  E-value=32  Score=29.79  Aligned_cols=39  Identities=13%  Similarity=0.258  Sum_probs=34.5

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYD  189 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~Vyc  189 (285)
                      .+|.++|.-..+++++.++++++|++++.++.+.+.+..
T Consensus       353 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~  391 (394)
T cd03794         353 EALAAAILELLDDPEERAEMGENGRRYVEEKFSREKLAE  391 (394)
T ss_pred             HHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhcHHHHHH
Confidence            678999998889999999999999999998888776654


No 25 
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=42.32  E-value=30  Score=31.03  Aligned_cols=41  Identities=15%  Similarity=0.161  Sum_probs=35.3

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYM  191 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm  191 (285)
                      .+|.++|.-.-++++..++++++|.+++.++++.+.+..-+
T Consensus       324 ~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l  364 (367)
T cd05844         324 AALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKL  364 (367)
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence            67899998888999999999999999999998877665533


No 26 
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor.  The members of this family are found mainly in bacteria and Archaea.
Probab=38.63  E-value=42  Score=32.18  Aligned_cols=39  Identities=13%  Similarity=0.100  Sum_probs=35.8

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYD  189 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~Vyc  189 (285)
                      +++.++|...-+++++.+++|++|.+++.++.+.+.+|.
T Consensus       365 ~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~  403 (407)
T cd04946         365 NELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYR  403 (407)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHH
Confidence            679999998888999999999999999999999888775


No 27 
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=37.76  E-value=47  Score=29.06  Aligned_cols=37  Identities=19%  Similarity=0.198  Sum_probs=32.1

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVY  188 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~Vy  188 (285)
                      ++|.++|...-++++...+++++|.+++.+ ++.+.+.
T Consensus       322 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~  358 (366)
T cd03822         322 AALAEAIRRLLADPELAQALRARAREYARA-MSWERVA  358 (366)
T ss_pred             HHHHHHHHHHHcChHHHHHHHHHHHHHHhh-CCHHHHH
Confidence            679999999999999999999999999976 7766543


No 28 
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=37.20  E-value=65  Score=29.80  Aligned_cols=56  Identities=11%  Similarity=0.092  Sum_probs=40.9

Q ss_pred             CcceeeeccCCCCcccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Q 039857          137 PMHHYWPIMENDKCRSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLL  195 (285)
Q Consensus       137 P~vHYwPIk~d~~c~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL  195 (285)
                      .....+-+...   .++..+|....+++++.++++++|.+++.++.+.+.+..=|+.++
T Consensus       314 ~~~~g~~~~~~---~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~  369 (372)
T cd03792         314 DGETGFLVDTV---EEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLI  369 (372)
T ss_pred             cCCceEEeCCc---HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            33444444432   467789988888999999999999999999988877766444433


No 29 
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=36.33  E-value=43  Score=28.95  Aligned_cols=38  Identities=11%  Similarity=0.225  Sum_probs=34.3

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVY  188 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~Vy  188 (285)
                      .++.++|.-..+++++.++++++|.+++.++.+.+.+.
T Consensus       333 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~  370 (375)
T cd03821         333 DALAAALRRALELPQRLKAMGENGRALVEERFSWTAIA  370 (375)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence            78999999999999999999999999999998877654


No 30 
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=32.80  E-value=1.2e+02  Score=28.25  Aligned_cols=49  Identities=14%  Similarity=0.015  Sum_probs=37.4

Q ss_pred             ceeeeccCCCCcccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHH
Q 039857          139 HHYWPIMENDKCRSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYD  189 (285)
Q Consensus       139 vHYwPIk~d~~c~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~Vyc  189 (285)
                      ..-+-+..++ .+++.++|...-++++..++++++|.+++ ++++.+.+-.
T Consensus       345 ~~g~~~~~~d-~~~la~~i~~~l~~~~~~~~~~~~~~~~~-~~fsw~~~~~  393 (405)
T TIGR03449       345 ETGLLVDGHD-PADWADALARLLDDPRTRIRMGAAAVEHA-AGFSWAATAD  393 (405)
T ss_pred             CceEECCCCC-HHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HhCCHHHHHH
Confidence            3345565443 37899999988899999999999999997 5677776655


No 31 
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=29.62  E-value=80  Score=28.55  Aligned_cols=40  Identities=10%  Similarity=0.061  Sum_probs=34.6

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDY  190 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycY  190 (285)
                      .++.++|+-.-+++++.++++++|++++.++.+.+.+..-
T Consensus       356 ~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~  395 (398)
T cd03800         356 EALAAALRRLLTDPALRRRLSRAGLRRARARYTWERVAAR  395 (398)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence            6788999888889999999999999999999887766543


No 32 
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=28.65  E-value=96  Score=29.20  Aligned_cols=50  Identities=14%  Similarity=0.082  Sum_probs=40.1

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcc
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLLNHYSKLLR  203 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~EYAKLlk  203 (285)
                      .++.++|...-+++.+.+.+++++.+++.++.+.+.+..   .+++-|.+++.
T Consensus       321 ~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~~---~~~~~y~~l~~  370 (398)
T cd03796         321 ESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDVAK---RTEKVYDRILQ  370 (398)
T ss_pred             HHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHHHH---HHHHHHHHHhc
Confidence            678899999888888888899999999999998887766   45555556654


No 33 
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=28.42  E-value=92  Score=27.00  Aligned_cols=30  Identities=7%  Similarity=-0.038  Sum_probs=27.3

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQE  180 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e  180 (285)
                      .+|.++|...-++++..+++++++.+++..
T Consensus       317 ~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~  346 (359)
T cd03823         317 EDLAAALERLIDDPDLLERLRAGIEPPRSI  346 (359)
T ss_pred             HHHHHHHHHHHhChHHHHHHHHhHHHhhhH
Confidence            689999999999999999999999998754


No 34 
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=27.59  E-value=86  Score=29.43  Aligned_cols=36  Identities=17%  Similarity=-0.043  Sum_probs=32.2

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcc
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDN  186 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~  186 (285)
                      .+|..+|...-+++++.++++++|.+++.++.+.+.
T Consensus       354 ~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~  389 (396)
T cd03818         354 DALAAAVIELLDDPARRARLRRAARRTALRYDLLSV  389 (396)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHH
Confidence            679999999999999999999999999988787554


No 35 
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.39  E-value=52  Score=33.11  Aligned_cols=30  Identities=17%  Similarity=0.244  Sum_probs=27.6

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQE  180 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e  180 (285)
                      .|+++++++--+|++++++||++|.+=|..
T Consensus       315 kdl~~~~~yll~h~~erkeiae~~ye~V~~  344 (373)
T COG4641         315 KDLKEKLKYLLNHPDERKEIAECAYERVLA  344 (373)
T ss_pred             HHHHHHHHHHhcCcchHHHHHHhhHHHHHH
Confidence            799999999999999999999999987753


No 36 
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of  galactose alpha-1,6 linkages in amylovoran.
Probab=27.00  E-value=87  Score=26.65  Aligned_cols=38  Identities=16%  Similarity=0.205  Sum_probs=31.8

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYD  189 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~Vyc  189 (285)
                      +++.++|.-.-++++..++++++|..++ ++++++.|..
T Consensus       307 ~~~~~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~  344 (348)
T cd03820         307 EALAEALLRLMEDEELRKRMGANARESA-ERFSIENIIK  344 (348)
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHH-HHhCHHHHHH
Confidence            6899999999999999999999998776 6677666543


No 37 
>PF09084 NMT1:  NMT1/THI5 like;  InterPro: IPR015168 This entry is found in the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine [, , ]. They are regulated by thiamine []. ; PDB: 2X26_A 3E4R_A 3KSJ_A 3KSX_A 3UIF_A 4DDD_A 1US4_A 1US5_A 3IX1_B 2X7P_A ....
Probab=26.94  E-value=39  Score=28.64  Aligned_cols=17  Identities=24%  Similarity=0.503  Sum_probs=14.7

Q ss_pred             ccHHHHHHHhhhcHHHH
Q 039857          151 RSIKFAVDWGNNHTETA  167 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eA  167 (285)
                      +.+..+++|.++||++|
T Consensus       200 ~a~~~a~~~~~~~p~eA  216 (216)
T PF09084_consen  200 KAYAKAIDWIRANPDEA  216 (216)
T ss_dssp             HHHHHHHHHHHCCHHHH
T ss_pred             HHHHHHHHHHHhChhhC
Confidence            45778999999999997


No 38 
>smart00648 SWAP Suppressor-of-White-APricot splicing regulator. domain present in regulators which are responsible for pre-mRNA splicing processes
Probab=26.85  E-value=76  Score=22.51  Aligned_cols=35  Identities=29%  Similarity=0.319  Sum_probs=22.9

Q ss_pred             HHHHHHHHHHHHHHHHh------------cCC-cchHHHHHHHHHHHH
Q 039857          165 ETAQGLGKAASKFVQEE------------LKL-DNVYDYMFHLLNHYS  199 (285)
Q Consensus       165 ~eAq~Ia~~G~~Fi~e~------------L~m-d~VycYm~hLL~EYA  199 (285)
                      .-|+-|+++|..|...-            |.. +.-+.|+..+|.+|.
T Consensus         6 ~tA~~Va~~G~~fe~~l~~~~~~n~~F~FL~~~~~~h~yy~~~l~~~~   53 (54)
T smart00648        6 KTAQFVARNGPEFEAKLMERERNNPQFDFLKPNDPYHAYYRKKLAEYR   53 (54)
T ss_pred             HHHHHHHHhhHHHHHHHHHhcCCCCCCccCCCCCCCcHHHHHHHHHHh
Confidence            34777788887764221            222 446788889998886


No 39 
>COG0715 TauA ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]
Probab=26.50  E-value=44  Score=30.49  Aligned_cols=24  Identities=13%  Similarity=0.261  Sum_probs=11.4

Q ss_pred             HHhhhcHHHHHHHHH---HHHHHHHHh
Q 039857          158 DWGNNHTETAQGLGK---AASKFVQEE  181 (285)
Q Consensus       158 ~Wgn~hd~eAq~Ia~---~G~~Fi~e~  181 (285)
                      +|..+||+.++++-+   .|.+|+.+|
T Consensus       227 ~~~~~~p~~~~~~l~a~~~a~~~~~~~  253 (335)
T COG0715         227 EFIEANPEAVKAFLKALAKATAWANAH  253 (335)
T ss_pred             HHHHHCHHHHHHHHHHHHHHHHHHHHC
Confidence            455555555554443   244444444


No 40 
>KOG2458 consensus Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif [General function prediction only]
Probab=26.25  E-value=35  Score=35.65  Aligned_cols=28  Identities=29%  Similarity=0.800  Sum_probs=21.0

Q ss_pred             CCCC--cchhhhcccccccccCCCHHHHhcccC
Q 039857           46 TCPD--YFRWIHKDLRPWVHTGITREMIERGRE   76 (285)
Q Consensus        46 ~CP~--yf~wi~~dl~PW~~~Gitr~~~e~a~~   76 (285)
                      .-|+  ||+|.+++++||...   .+++.+|++
T Consensus       248 VfPdwsfwgw~e~nik~w~~~---~~~~~egn~  277 (528)
T KOG2458|consen  248 VFPDWSFWGWAEVNIKPWEKL---LEDIVEGNK  277 (528)
T ss_pred             cccCccccCChhhcccccchH---HHHHHhhcc
Confidence            4676  999999999999984   555555543


No 41 
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway.  The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=25.59  E-value=1.2e+02  Score=28.82  Aligned_cols=68  Identities=15%  Similarity=0.232  Sum_probs=50.7

Q ss_pred             cccHHHHHHHhhhc----------HHHHHHHHHHHHHHHHH-----------hcCCcchHHHHHHHHHHHHhhccc-CCC
Q 039857          150 CRSIKFAVDWGNNH----------TETAQGLGKAASKFVQE-----------ELKLDNVYDYMFHLLNHYSKLLRY-QPT  207 (285)
Q Consensus       150 c~dIk~aV~Wgn~h----------d~eAq~Ia~~G~~Fi~e-----------~L~md~VycYm~hLL~EYAKLlky-kP~  207 (285)
                      -+||++.|++|+++          |.-+..+.+.-..+.-.           ++.-+.+|.++..||+||+.+..- -+.
T Consensus        81 ~~di~eiv~yA~~rgI~vIPEID~PGH~~a~~~~~pel~~~~~~~~~~~~~l~~~~~~t~~f~~~l~~E~~~~f~~~~~~  160 (326)
T cd06564          81 KEEFKELIAYAKDRGVNIIPEIDSPGHSLAFTKAMPELGLKNPFSKYDKDTLDISNPEAVKFVKALFDEYLDGFNPKSDT  160 (326)
T ss_pred             HHHHHHHHHHHHHcCCeEeccCCCcHHHHHHHHhhHHhcCCCcccCCCcccccCCCHHHHHHHHHHHHHHHHhcCCCCCE
Confidence            47899999999987          66677777665554433           345578999999999999999762 366


Q ss_pred             cCCCcccccc
Q 039857          208 IPPKADEYCA  217 (285)
Q Consensus       208 vp~~a~Evc~  217 (285)
                      +.=|+-|+-.
T Consensus       161 ~HiGgDE~~~  170 (326)
T cd06564         161 VHIGADEYAG  170 (326)
T ss_pred             EEeccccccc
Confidence            6777777644


No 42 
>COG1428 Deoxynucleoside kinases [Nucleotide transport and metabolism]
Probab=23.77  E-value=65  Score=30.18  Aligned_cols=38  Identities=21%  Similarity=0.317  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhccc
Q 039857          165 ETAQGLGKAASKFVQEELKLDNVYDYMFHLLNHYSKLLRY  204 (285)
Q Consensus       165 ~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~EYAKLlky  204 (285)
                      ..=++|++||+.|  |+..-+.=++|+.+|-..|..++..
T Consensus       139 ~~l~RI~~RgR~~--E~~~~~~~~~Y~~~l~~~Y~~~~~~  176 (216)
T COG1428         139 TLLRRIAKRGRPF--EIDNFDENKDYLKDLHRRYDDWFEN  176 (216)
T ss_pred             HHHHHHHHhCCCc--ccccccchHHHHHHHHHHHHHHHHh
Confidence            4458999999999  4333333399999999999999864


No 43 
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=23.67  E-value=1.2e+02  Score=25.97  Aligned_cols=44  Identities=23%  Similarity=0.231  Sum_probs=35.3

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLLN  196 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~  196 (285)
                      .+|..+|...-++++.  ++++++.+.+.++++.+.+..-+..+|+
T Consensus       332 ~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~  375 (377)
T cd03798         332 EALAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYR  375 (377)
T ss_pred             HHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence            6788999999999887  8899999999999888776665555443


No 44 
>PF05456 eIF_4EBP:  Eukaryotic translation initiation factor 4E binding protein (EIF4EBP);  InterPro: IPR008606 This family consists of several eukaryotic translation initiation factor 4E binding proteins (EIF4EBP1, -2 and -3). Translation initiation in eukaryotes is mediated by the cap structure (m7GpppN, where N is any nucleotide) present at the 5' end of all cellular mRNAs, except organellar. The cap is recognised by eukaryotic initiation factor 4F (eIF4F), which consists of three polypeptides, including eIF4E, the cap-binding protein subunit. The interaction of the cap with eIF4E facilitates the binding of the ribosome to the mRNA. eIF4E activity is regulated in part by translational repressors, 4E-BP1, 4E-BP2 and 4E-BP3 which bind to it and prevent its assembly into eIF4F [].; GO: 0008190 eukaryotic initiation factor 4E binding, 0045947 negative regulation of translational initiation; PDB: 2JGB_B 2V8Y_F 1WKW_B 3HXG_C 3U7X_D 3M94_C 3M93_C 2V8X_B 3HXI_C 2V8W_B ....
Probab=23.60  E-value=34  Score=29.16  Aligned_cols=22  Identities=45%  Similarity=0.711  Sum_probs=7.4

Q ss_pred             HHHhHHhhhhccCC-CCCCCCCCC
Q 039857          227 LARKFMEESFVKSP-KETSPCTLP  249 (285)
Q Consensus       227 ~~r~fm~eS~v~~p-~~~~PC~~p  249 (285)
                      -+|+||++ +-.|| |-+.||.||
T Consensus        50 YdR~FLL~-~RnSPlSrTPP~~Lp   72 (116)
T PF05456_consen   50 YDRKFLLE-CRNSPLSRTPPRNLP   72 (116)
T ss_dssp             --HHHHHC-TCG------------
T ss_pred             EeHHHHHH-hcCCCcccCCCCccC
Confidence            47999997 55688 777898885


No 45 
>PF12240 Angiomotin_C:  Angiomotin C terminal;  InterPro: IPR024646 This domain represents the C-terminal region of angiomotin. Angiomotin regulates the action of angiogenesis-inhibitor angiostatin []. The C-terminal region of angiomotin appears to be involved in directing the protein chemotactically [].
Probab=23.49  E-value=1.2e+02  Score=28.32  Aligned_cols=34  Identities=21%  Similarity=0.574  Sum_probs=27.5

Q ss_pred             CCCChhHHHHHHHhhhhHHH----HHHHHHHHHHHhhh
Q 039857          250 PPYDPISLHDVLWGEKKSVL----QVESWTRAYWETQT  283 (285)
Q Consensus       250 pp~~~~~l~~~~~rk~~~~~----qVe~we~~~w~~~~  283 (285)
                      ++++...|++.|+.||+-|-    .|-+||.+|-++-+
T Consensus        55 ~~~~~~~L~~~LrEkEErILaLEad~~kWEqkYLEEs~   92 (205)
T PF12240_consen   55 PSNNASNLKELLREKEERILALEADMTKWEQKYLEESA   92 (205)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34899999999999998665    45689999987643


No 46 
>PF10685 KGG:  Stress-induced bacterial acidophilic repeat motif;  InterPro: IPR019626  This repeat contains a highly conserved, characteristic sequence motif, KGG, that is recognised by plants and lower eukaryotes. Further downstream from this motif is a Walker A, nucleotide binding motif. YciG is expressed as part of a three-gene operon, yciGFE and this operon is induced by stress and is regulated by RpoS, which controls the general stress-response in E coli. YciG was shown to be important for stationary-phase resistance to thermal stress and in particular to acid stress []. 
Probab=23.30  E-value=55  Score=20.59  Aligned_cols=16  Identities=19%  Similarity=0.466  Sum_probs=13.0

Q ss_pred             HhhhcHHHHHHHHHHH
Q 039857          159 WGNNHTETAQGLGKAA  174 (285)
Q Consensus       159 Wgn~hd~eAq~Ia~~G  174 (285)
                      |++-.+++|++||+.|
T Consensus         2 Fa~~d~e~~~eig~kG   17 (23)
T PF10685_consen    2 FASMDPEKAREIGRKG   17 (23)
T ss_pred             ccccCHHHHHHHHHhc
Confidence            4555789999999877


No 47 
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=23.21  E-value=1.3e+02  Score=29.67  Aligned_cols=37  Identities=19%  Similarity=0.209  Sum_probs=32.5

Q ss_pred             ccHHHHHHHhhhcHHHHHHHHHHHHHHHHHhcCCcch
Q 039857          151 RSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNV  187 (285)
Q Consensus       151 ~dIk~aV~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md~V  187 (285)
                      .+|.++|...-++++..++++++|.+++.++.+.+.+
T Consensus       430 ~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~  466 (475)
T cd03813         430 EALARAILRLLKDPELRRAMGEAGRKRVERYYTLERM  466 (475)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence            6899999999999999999999999999888775443


No 48 
>PF12878 SICA_beta:  SICA extracellular beta domain;  InterPro: IPR024285 The schizont-infected cell agglutination (SICA) proteins of Plasmodium knowlesi, one of the variant antigen gene families, are associated with parasitic virulence. SICA proteins comprise multiple domains, with the extracellular cysteine-rich domains (CRDs) occurring at different frequencies. They contain a five-cysteine CRD (SICA-alpha) at the N terminus, which occurs once or twice, then between 1 and 10 SICA-beta CRDs with 7-10 cysteine residues, a transmembrane domain, and a conserved C-terminal domain []. This entry represents the extracellular SICA-beta domain.
Probab=22.61  E-value=98  Score=27.62  Aligned_cols=61  Identities=23%  Similarity=0.229  Sum_probs=38.3

Q ss_pred             hhhcHHHHHHHHHHHHHHHHHhcCCc---------chHHHHH-HHHHHHHhhcccCCCcCCCccccccccccCCcc-hHH
Q 039857          160 GNNHTETAQGLGKAASKFVQEELKLD---------NVYDYMF-HLLNHYSKLLRYQPTIPPKADEYCAETLGCPEE-GLA  228 (285)
Q Consensus       160 gn~hd~eAq~Ia~~G~~Fi~e~L~md---------~VycYm~-hLL~EYAKLlkykP~vp~~a~Evc~esm~C~~~-g~~  228 (285)
                      +..-..+|-..--+|...|-+.=.-.         ..-.-|. -||++||+-|+-+.              .|..+ |..
T Consensus        64 ~~~~~K~AC~~i~AGL~~ly~~~~~~~~~~~~~~~~f~qtm~C~lLnaYAkkmke~a--------------~C~Ie~GI~  129 (169)
T PF12878_consen   64 ATSAEKEACNLIAAGLKHLYKITNGSSNKNLDDNPSFKQTMGCFLLNAYAKKMKEKA--------------ICDIEEGIK  129 (169)
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccHHHHHHHHHHHHHHHHHHHcC--------------CCChHHHHH
Confidence            44445667777777877775532211         1111222 78999999998776              48876 777


Q ss_pred             HhHHhh
Q 039857          229 RKFMEE  234 (285)
Q Consensus       229 r~fm~e  234 (285)
                      +-|=.-
T Consensus       130 kAF~~~  135 (169)
T PF12878_consen  130 KAFDKW  135 (169)
T ss_pred             HHHHHH
Confidence            777553


No 49 
>PF05920 Homeobox_KN:  Homeobox KN domain;  InterPro: IPR008422 This entry represents a homeobox transcription factor KN domain conserved from fungi to human and plants [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3K2A_B 2LK2_A 1X2N_A 2DMN_A.
Probab=21.58  E-value=95  Score=21.37  Aligned_cols=26  Identities=19%  Similarity=0.274  Sum_probs=17.8

Q ss_pred             CC-ChhHHHHHHHhhhhHHHHHHHHHH
Q 039857          251 PY-DPISLHDVLWGEKKSVLQVESWTR  276 (285)
Q Consensus       251 p~-~~~~l~~~~~rk~~~~~qVe~we~  276 (285)
                      || +.+|...+.+.=.-+++||..|=-
T Consensus         9 PYPs~~ek~~L~~~tgls~~Qi~~WF~   35 (40)
T PF05920_consen    9 PYPSKEEKEELAKQTGLSRKQISNWFI   35 (40)
T ss_dssp             GS--HHHHHHHHHHHTS-HHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence            45 666777777777778899999853


No 50 
>KOG1247 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=21.22  E-value=1e+02  Score=32.15  Aligned_cols=99  Identities=19%  Similarity=0.270  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHHHHhc----------CCcchHHHHHHHHHHHHhhcc-cCCCcCCCccccccccccCCcchHHHhHHh
Q 039857          165 ETAQGLGKAASKFVQEEL----------KLDNVYDYMFHLLNHYSKLLR-YQPTIPPKADEYCAETLGCPEEGLARKFME  233 (285)
Q Consensus       165 ~eAq~Ia~~G~~Fi~e~L----------~md~VycYm~hLL~EYAKLlk-ykP~vp~~a~Evc~esm~C~~~g~~r~fm~  233 (285)
                      +.|-.|.++|.+||+++-          +-..|.++-+.++---|-||- |-|+++....+.|.              +.
T Consensus       456 ~~~m~is~~GNqylQ~~~~~k~~~~~r~r~~~vi~~a~nii~lvs~ll~P~mP~~s~~I~kqln--------------lp  521 (567)
T KOG1247|consen  456 KTAMEISRRGNQYLQENTDNKLYEESRQRAGTVIGLAANIIYLVSVLLYPYMPTTSAEILKQLN--------------LP  521 (567)
T ss_pred             HHHHHHHHhhhHHHhcccccchhhhcccccceeeehhhHHHHHHHHHhccccccchHHHHHHhC--------------Cc
Confidence            457789999999999883          334677888888877777774 66665554443333              11


Q ss_pred             hhhccCCCCCCCCCCCCCCChhHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 039857          234 ESFVKSPKETSPCTLPPPYDPISLHDVLWGEKKSVLQVESWTRAYWETQ  282 (285)
Q Consensus       234 eS~v~~p~~~~PC~~ppp~~~~~l~~~~~rk~~~~~qVe~we~~~w~~~  282 (285)
                      +++  .| +..=|.+++-..-.+..-+.++=++  .|+|.|...|--.|
T Consensus       522 ~~~--~~-~~~~~~l~~gH~ig~~~pLFq~l~~--~qiee~r~k~gg~q  565 (567)
T KOG1247|consen  522 ETL--FP-DRFICRLLAGHRIGTPSPLFQKLDE--DQIEEWRAKFGGQQ  565 (567)
T ss_pred             ccc--CC-CccceeecCcCccCCccHHHHhcCH--HHHHHHHHhhcCCC
Confidence            222  12 2334778777655555555665553  68899988876544


No 51 
>PHA01630 putative group 1 glycosyl transferase
Probab=21.14  E-value=1.3e+02  Score=28.70  Aligned_cols=47  Identities=9%  Similarity=0.039  Sum_probs=33.4

Q ss_pred             cHHHHHHHhhhc--HHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 039857          152 SIKFAVDWGNNH--TETAQGLGKAASKFVQEELKLDNVYDYMFHLLNHY  198 (285)
Q Consensus       152 dIk~aV~Wgn~h--d~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~EY  198 (285)
                      ++.+++.-.-.+  +++.++.++++..++.++++-+.+..-+.++|++|
T Consensus       283 ~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~  331 (331)
T PHA01630        283 DAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY  331 (331)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence            344444333333  47778888888888889999999988888888765


No 52 
>KOG4564 consensus Adenylate cyclase-coupled calcitonin receptor [Signal transduction mechanisms]
Probab=20.72  E-value=59  Score=33.58  Aligned_cols=14  Identities=36%  Similarity=0.750  Sum_probs=11.9

Q ss_pred             CCCCCCCCcchhhh
Q 039857           42 PAPSTCPDYFRWIH   55 (285)
Q Consensus        42 ~~~~~CP~yf~wi~   55 (285)
                      .....||+||.|.+
T Consensus        82 ~v~~~CP~yf~~~~   95 (473)
T KOG4564|consen   82 LVTVPCPDYFPGFS   95 (473)
T ss_pred             eEEecCccccCCCc
Confidence            45678999999998


No 53 
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=20.65  E-value=1.4e+02  Score=26.58  Aligned_cols=35  Identities=14%  Similarity=0.028  Sum_probs=29.9

Q ss_pred             ccHHHHH-HHhhhcHHHHHHHHHHHHHHHHHhcCCc
Q 039857          151 RSIKFAV-DWGNNHTETAQGLGKAASKFVQEELKLD  185 (285)
Q Consensus       151 ~dIk~aV-~Wgn~hd~eAq~Ia~~G~~Fi~e~L~md  185 (285)
                      .++..+| .....++++.++++++|.+++.++.+-+
T Consensus       318 ~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~  353 (355)
T cd03819         318 EALAQALDQILSLLPEGRAKMFAKARMCVETLFSYD  353 (355)
T ss_pred             HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhc
Confidence            6789999 5777799999999999999998876544


Done!